locus-tag class description BF28_1 IPR034701 Diadenylate cyclase CdaA BF28_1 IPR003390 DNA integrity scanning protein, DisA, N-terminal BF28_1 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily BF28_1 IPR014046 Diadenylate cyclase BF28_1001 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site BF28_1001 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BF28_1001 IPR002942 RNA-binding S4 domain BF28_1001 IPR036986 RNA-binding S4 domain superfamily BF28_1001 IPR002307 Tyrosine-tRNA ligase BF28_1001 IPR024088 Tyrosine-tRNA ligase, bacterial-type BF28_1001 IPR002305 Aminoacyl-tRNA synthetase, class Ic BF28_1001 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 BF28_1010 IPR036986 RNA-binding S4 domain superfamily BF28_1010 IPR002942 RNA-binding S4 domain BF28_1010 IPR018079 Ribosomal protein S4, conserved site BF28_1010 IPR001912 Ribosomal protein S4/S9, N-terminal BF28_1010 IPR022801 Ribosomal protein S4/S9 BF28_1010 IPR005709 Ribosomal protein S4, bacterial-type BF28_1011 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme BF28_1011 IPR006237 L-methionine gamma-lyase BF28_1011 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BF28_1011 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BF28_1011 IPR015424 Pyridoxal phosphate-dependent transferase BF28_1012 IPR029016 GAF-like domain superfamily BF28_1012 IPR000614 Free Met sulfoxide reductase conserved site BF28_1012 IPR003018 GAF domain BF28_1013 IPR009057 Homeobox-like domain superfamily BF28_1013 IPR023772 DNA-binding HTH domain, TetR-type, conserved site BF28_1013 IPR001647 DNA-binding HTH domain, TetR-type BF28_1014 IPR000620 EamA domain BF28_1015 IPR036390 Winged helix DNA-binding domain superfamily BF28_1015 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_1015 IPR000847 Transcription regulator HTH, LysR BF28_1015 IPR005119 LysR, substrate-binding BF28_1016 IPR010379 Septation ring formation regulator EzrA BF28_1017 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BF28_1017 IPR000192 Aminotransferase class V domain BF28_1017 IPR016454 Cysteine desulfurase BF28_1017 IPR015424 Pyridoxal phosphate-dependent transferase BF28_1017 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BF28_1018 IPR003720 tRNA sulfurtransferase ThiI BF28_1018 IPR004114 THUMP domain BF28_1018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BF28_1018 IPR020536 Thil, AANH domain BF28_1019 IPR038300 SASP, alpha/beta-type superfamily BF28_1019 IPR001448 Small acid-soluble spore protein, alpha/beta-type BF28_1019 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site BF28_1020 IPR025110 AMP-binding enzyme, C-terminal domain BF28_1020 IPR020845 AMP-binding, conserved site BF28_1020 IPR000873 AMP-dependent synthetase/ligase BF28_1020 IPR042099 AMP-dependent synthetase-like superfamily BF28_1022 IPR032466 Metal-dependent hydrolase BF28_1022 IPR033932 YtcJ like BF28_1022 IPR013108 Amidohydrolase 3 BF28_1022 IPR011059 Metal-dependent hydrolase, composite domain superfamily BF28_1023 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal BF28_1023 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal BF28_1023 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily BF28_1023 IPR002504 NAD kinase BF28_1025 IPR014229 Sporulation protein YtfJ BF28_1026 IPR036249 Thioredoxin-like superfamily BF28_1026 IPR002065 Thiol peroxidase Tpx BF28_1026 IPR013740 Redoxin BF28_1026 IPR018219 Thiol peroxidase conserved site BF28_1026 IPR013766 Thioredoxin domain BF28_1027 IPR003356 DNA methylase, adenine-specific BF28_1027 IPR016843 S-adenosyl-L-methionine dependent adenine methyltransferase, bacteria, predicted BF28_1027 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BF28_1028 IPR004372 Acetate/propionate kinase BF28_1028 IPR000890 Aliphatic acid kinase, short-chain BF28_1028 IPR023865 Aliphatic acid kinase, short-chain, conserved site BF28_1030 IPR024787 EcsC protein BF28_1031 IPR003740 Uncharacterised membrane protein YitT BF28_1031 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal BF28_1031 IPR019264 Domain of unknown function DUF2179 BF28_1035 IPR018223 Argininosuccinate synthase, conserved site BF28_1035 IPR023434 Argininosuccinate synthase, type 1 subfamily BF28_1035 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body BF28_1035 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BF28_1035 IPR001518 Argininosuccinate synthase BF28_1036 IPR024083 Fumarase/histidase, N-terminal BF28_1036 IPR009049 Argininosuccinate lyase BF28_1036 IPR029419 Argininosuccinate lyase, C-terminal BF28_1036 IPR008948 L-Aspartase-like BF28_1036 IPR022761 Fumarate lyase, N-terminal BF28_1036 IPR020557 Fumarate lyase, conserved site BF28_1036 IPR000362 Fumarate lyase family BF28_1040 IPR006015 Universal stress protein A family BF28_1040 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BF28_1040 IPR006016 UspA BF28_1041 IPR002347 Short-chain dehydrogenase/reductase SDR BF28_1041 IPR036291 NAD(P)-binding domain superfamily BF28_1042 IPR008141 Alanine dehydrogenase BF28_1042 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 BF28_1042 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal BF28_1042 IPR036291 NAD(P)-binding domain superfamily BF28_1042 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain BF28_1042 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 BF28_1044 IPR010982 Lambda repressor-like, DNA-binding domain superfamily BF28_1044 IPR001387 Cro/C1-type helix-turn-helix domain BF28_1046 IPR013096 Cupin 2, conserved barrel BF28_1046 IPR019780 Germin, manganese binding site BF28_1046 IPR014710 RmlC-like jelly roll fold BF28_1046 IPR011051 RmlC-like cupin domain superfamily BF28_1054 IPR000994 Peptidase M24 BF28_1054 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal BF28_1054 IPR036005 Creatinase/aminopeptidase-like BF28_1054 IPR000587 Creatinase, N-terminal BF28_1054 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site BF28_1054 IPR001714 Peptidase M24, methionine aminopeptidase BF28_1055 IPR001279 Metallo-beta-lactamase BF28_1055 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BF28_1055 IPR022877 Protein of unknown funcion UPF0173 BF28_1057 IPR036390 Winged helix DNA-binding domain superfamily BF28_1057 IPR000644 CBS domain BF28_1057 IPR000524 Transcription regulator HTH, GntR BF28_1057 IPR006683 Thioesterase domain BF28_1057 IPR010766 DRTGG BF28_1057 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily BF28_1057 IPR029069 HotDog domain superfamily BF28_1057 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_1059 IPR011009 Protein kinase-like domain superfamily BF28_1059 IPR002575 Aminoglycoside phosphotransferase BF28_1061 IPR025618 YtpI-like protein BF28_1062 IPR003156 DHHA1 domain BF28_1062 IPR001667 DDH domain BF28_1062 IPR038763 DHH phosphoesterase superfamily BF28_1064 IPR025689 Sporulation protein YtrH BF28_1065 IPR004805 DNA polymerase III, alpha subunit BF28_1065 IPR016195 Polymerase/histidinol phosphatase-like BF28_1065 IPR004013 PHP domain BF28_1065 IPR003141 Polymerase/histidinol phosphatase, N-terminal BF28_1065 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type BF28_1065 IPR029460 DNA polymerase, helix-hairpin-helix motif BF28_1065 IPR040982 DNA polymerase III alpha subunit finger domain BF28_1065 IPR041931 Bacterial DNA polymerase III alpha subunit, thumb domain BF28_1065 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain BF28_1066 IPR012302 Malic enzyme, NAD-binding BF28_1066 IPR012301 Malic enzyme, N-terminal domain BF28_1066 IPR015884 Malic enzyme, conserved site BF28_1066 IPR001891 Malic oxidoreductase BF28_1066 IPR036291 NAD(P)-binding domain superfamily BF28_1066 IPR037062 Malic enzyme, N-terminal domain superfamily BF28_1067 IPR036390 Winged helix DNA-binding domain superfamily BF28_1067 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_1067 IPR000524 Transcription regulator HTH, GntR BF28_1068 IPR041010 Acetyl-coA carboxylase zinc finger domain BF28_1068 IPR029045 ClpP/crotonase-like domain superfamily BF28_1068 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit BF28_1068 IPR034733 Acetyl-CoA carboxylase BF28_1068 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal BF28_1069 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal BF28_1069 IPR029045 ClpP/crotonase-like domain superfamily BF28_1069 IPR001095 Acetyl-CoA carboxylase, alpha subunit BF28_107 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type BF28_107 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal BF28_107 IPR034762 Bacterial/eukaryotic lysine-tRNA ligase, class II BF28_107 IPR012340 Nucleic acid-binding, OB-fold BF28_107 IPR006195 Aminoacyl-tRNA synthetase, class II BF28_107 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) BF28_107 IPR002313 Lysine-tRNA ligase, class II BF28_1070 IPR035966 Phosphofructokinase superfamily BF28_1070 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type BF28_1070 IPR022953 ATP-dependent 6-phosphofructokinase BF28_1070 IPR015912 Phosphofructokinase, conserved site BF28_1070 IPR000023 Phosphofructokinase domain BF28_1070 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic BF28_1071 IPR036637 Phosphohistidine domain superfamily BF28_1071 IPR018209 Pyruvate kinase, active site BF28_1071 IPR015793 Pyruvate kinase, barrel BF28_1071 IPR011037 Pyruvate kinase-like, insert domain superfamily BF28_1071 IPR040442 Pyruvate kinase-like domain superfamily BF28_1071 IPR001697 Pyruvate kinase BF28_1071 IPR015795 Pyruvate kinase, C-terminal BF28_1071 IPR015806 Pyruvate kinase, insert domain superfamily BF28_1071 IPR036918 Pyruvate kinase, C-terminal domain superfamily BF28_1071 IPR008279 PEP-utilising enzyme, mobile domain BF28_1071 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily BF28_1072 IPR007313 FxsA cytoplasmic membrane protein BF28_1073 IPR014227 Putative transport protein YtvI-like BF28_1073 IPR002549 Transmembrane protein TqsA-like BF28_1074 IPR007382 Uncharacterised protein family UPF0756, transmembrame BF28_1075 IPR016143 Citrate synthase-like, small alpha subdomain BF28_1075 IPR002020 Citrate synthase BF28_1075 IPR024176 Citrate synthase, bacterial-type BF28_1075 IPR011278 2-methylcitrate synthase/citrate synthase type I BF28_1075 IPR036969 Citrate synthase superfamily BF28_1075 IPR019810 Citrate synthase active site BF28_1075 IPR016142 Citrate synthase-like, large alpha subdomain BF28_1076 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site BF28_1076 IPR024084 Isopropylmalate dehydrogenase-like domain BF28_1076 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic BF28_1077 IPR001557 L-lactate/malate dehydrogenase BF28_1077 IPR022383 Lactate/malate dehydrogenase, C-terminal BF28_1077 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal BF28_1077 IPR001236 Lactate/malate dehydrogenase, N-terminal BF28_1077 IPR011275 Malate dehydrogenase, type 3 BF28_1077 IPR036291 NAD(P)-binding domain superfamily BF28_108 IPR013785 Aldolase-type TIM barrel BF28_108 IPR035587 DUS-like, FMN-binding domain BF28_108 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal BF28_108 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 BF28_108 IPR018517 tRNA-dihydrouridine synthase, conserved site BF28_108 IPR001269 tRNA-dihydrouridine synthase BF28_1081 IPR011006 CheY-like superfamily BF28_1081 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_1081 IPR001867 OmpR/PhoB-type DNA-binding domain BF28_1081 IPR039420 Transcriptional regulatory protein WalR-like BF28_1081 IPR016032 Signal transduction response regulator, C-terminal effector BF28_1081 IPR001789 Signal transduction response regulator, receiver domain BF28_1082 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BF28_1082 IPR005467 Histidine kinase domain BF28_1082 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BF28_1082 IPR003594 Histidine kinase/HSP90-like ATPase BF28_1082 IPR000014 PAS domain BF28_1082 IPR035965 PAS domain superfamily BF28_1082 IPR013767 PAS fold BF28_1082 IPR031967 PhoR, single Cache-like domain BF28_1082 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BF28_1082 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BF28_1083 IPR002421 5'-3' exonuclease, N-terminal BF28_1083 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal BF28_1083 IPR008918 Helix-hairpin-helix motif, class 2 BF28_1083 IPR036279 5'-3' exonuclease, C-terminal domain superfamily BF28_1083 IPR019760 DNA-directed DNA polymerase, family A, conserved site BF28_1083 IPR001098 DNA-directed DNA polymerase, family A, palm domain BF28_1083 IPR036397 Ribonuclease H superfamily BF28_1083 IPR002562 3'-5' exonuclease domain BF28_1083 IPR012337 Ribonuclease H-like superfamily BF28_1083 IPR029060 PIN-like domain superfamily BF28_1083 IPR002298 DNA polymerase A BF28_1083 IPR018320 DNA polymerase 1 BF28_1083 IPR020045 DNA polymerase I-like, H3TH domain BF28_1084 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain BF28_1084 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding BF28_1084 IPR010663 Zinc finger, FPG/IleRS-type BF28_1084 IPR020629 Formamidopyrimidine-DNA glycosylase BF28_1084 IPR035937 MutM-like, N-terminal BF28_1084 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site BF28_1084 IPR010979 Ribosomal protein S13-like, H2TH BF28_1084 IPR000214 Zinc finger, DNA glycosylase/AP lyase-type BF28_1085 IPR014205 Sporulation protein YtaF BF28_1085 IPR003810 Putative manganese efflux pump BF28_1086 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_1086 IPR001977 Dephospho-CoA kinase BF28_1087 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain BF28_1087 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site BF28_1087 IPR036291 NAD(P)-binding domain superfamily BF28_1087 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain BF28_1087 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I BF28_1087 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family BF28_1089 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic BF28_1089 IPR016067 S-adenosylmethionine decarboxylase, core BF28_1089 IPR017716 S-adenosylmethionine decarboxylase proenzyme BF28_109 IPR010982 Lambda repressor-like, DNA-binding domain superfamily BF28_109 IPR001387 Cro/C1-type helix-turn-helix domain BF28_1090 IPR003796 Ribonucleotide reductase regulator NrdR-like BF28_1090 IPR005144 ATP-cone domain BF28_1091 IPR006343 DnaD domain BF28_1092 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_1092 IPR002611 IstB-like ATP-binding protein BF28_1092 IPR003593 AAA+ ATPase domain BF28_1092 IPR009928 Primosomal DnaI, N-terminal BF28_1093 IPR014199 Sporulation protein YtxC BF28_1094 IPR004095 TGS BF28_1094 IPR012675 Beta-grasp domain superfamily BF28_1094 IPR036621 Anticodon-binding domain superfamily BF28_1094 IPR012947 Threonyl/alanyl tRNA synthetase, SAD BF28_1094 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) BF28_1094 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily BF28_1094 IPR004154 Anticodon-binding BF28_1094 IPR033728 Threonine-tRNA ligase catalytic core domain BF28_1094 IPR002320 Threonine-tRNA ligase, class IIa BF28_1094 IPR006195 Aminoacyl-tRNA synthetase, class II BF28_1094 IPR012676 TGS-like BF28_1095 IPR001288 Translation initiation factor 3 BF28_1095 IPR019813 Translation initiation factor 3, conserved site BF28_1095 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily BF28_1095 IPR019814 Translation initiation factor 3, N-terminal BF28_1095 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily BF28_1095 IPR019815 Translation initiation factor 3, C-terminal BF28_1096 IPR037229 Ribosomal protein L35 superfamily BF28_1096 IPR001706 Ribosomal protein L35, non-mitochondrial BF28_1096 IPR018265 Ribosomal protein L35, conserved site BF28_1096 IPR021137 Ribosomal protein L35 BF28_1097 IPR005813 Ribosomal protein L20 BF28_1097 IPR035566 Ribosomal protein L20, C-terminal BF28_1099 IPR008007 Peptidase M42 BF28_1099 IPR023367 Peptidase M42, domain 2 BF28_110 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily BF28_110 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK BF28_1100 IPR001647 DNA-binding HTH domain, TetR-type BF28_1100 IPR009057 Homeobox-like domain superfamily BF28_1100 IPR011075 Tetracyclin repressor-like, C-terminal domain BF28_1100 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily BF28_1101 IPR011053 Single hybrid motif BF28_1102 IPR036259 MFS transporter superfamily BF28_1102 IPR020846 Major facilitator superfamily domain BF28_1102 IPR011701 Major facilitator superfamily BF28_1102 IPR004638 Drug resistance transporter EmrB-like BF28_1105 IPR003607 HD/PDEase domain BF28_1105 IPR006674 HD domain BF28_1105 IPR006675 HDIG domain BF28_1106 IPR017525 Small, acid-soluble spore protein I BF28_1107 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal BF28_1107 IPR029028 Alpha/beta knot methyltransferases BF28_1107 IPR029064 50S ribosomal protein L30e-like BF28_1107 IPR001537 tRNA/rRNA methyltransferase, SpoU type BF28_1107 IPR013123 RNA 2-O ribose methyltransferase, substrate binding BF28_1108 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial BF28_1108 IPR006195 Aminoacyl-tRNA synthetase, class II BF28_1108 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit BF28_1108 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal BF28_1108 IPR002319 Phenylalanyl-tRNA synthetase BF28_1108 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm BF28_1109 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily BF28_1109 IPR012340 Nucleic acid-binding, OB-fold BF28_1109 IPR002547 tRNA-binding domain BF28_1109 IPR005146 B3/B4 tRNA-binding domain BF28_1109 IPR041616 Phenylalanyl tRNA synthetase beta chain, core domain BF28_1109 IPR033714 Phenylalanly tRNA synthetase, tRNA-binding-domain BF28_1109 IPR005147 tRNA synthetase, B5-domain BF28_1109 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 BF28_1109 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit BF28_1109 IPR009061 Putative DNA-binding domain superfamily BF28_1109 IPR005121 Ferrodoxin-fold anticodon-binding domain BF28_111 IPR006156 Dihydroneopterin aldolase BF28_111 IPR006157 Dihydroneopterin aldolase/epimerase domain BF28_1110 IPR012340 Nucleic acid-binding, OB-fold BF28_1110 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb BF28_1110 IPR006195 Aminoacyl-tRNA synthetase, class II BF28_1110 IPR004522 Asparagine-tRNA ligase BF28_1110 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) BF28_1110 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type BF28_1114 IPR024567 Ribonuclease HII/HIII domain BF28_1114 IPR012295 TBP domain superfamily BF28_1114 IPR036397 Ribonuclease H superfamily BF28_1114 IPR012337 Ribonuclease H-like superfamily BF28_1114 IPR024568 Ribonuclease HIII, N-terminal BF28_1114 IPR004641 Ribonuclease HIII BF28_1114 IPR001352 Ribonuclease HII/HIII BF28_1115 IPR007838 Cell division protein ZapA-like BF28_1115 IPR023688 Cell division protein ZapA, firmicutes BF28_1115 IPR036192 Cell division protein ZapA-like superfamily BF28_1116 IPR003825 Colicin V production, CvpA BF28_1117 IPR022311 Uncharacterised conserved protein UCP005047, YshC BF28_1117 IPR010996 DNA polymerase beta-like, N-terminal domain BF28_1117 IPR027421 DNA polymerase lambda lyase domain superfamily BF28_1117 IPR016195 Polymerase/histidinol phosphatase-like BF28_1117 IPR003141 Polymerase/histidinol phosphatase, N-terminal BF28_1117 IPR004013 PHP domain BF28_1117 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 BF28_1117 IPR037160 DNA polymerase, thumb domain superfamily BF28_1117 IPR002054 DNA-directed DNA polymerase X BF28_1117 IPR029398 DNA polymerase beta, thumb domain BF28_1118 IPR000432 DNA mismatch repair protein MutS, C-terminal BF28_1118 IPR036187 DNA mismatch repair protein MutS, core domain superfamily BF28_1118 IPR005747 Endonuclease MutS2 BF28_1118 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_1118 IPR002625 Smr domain BF28_1118 IPR036063 Smr domain superfamily BF28_1118 IPR007696 DNA mismatch repair protein MutS, core BF28_112 IPR006390 Dihydropteroate synthase BF28_112 IPR011005 Dihydropteroate synthase-like BF28_112 IPR000489 Pterin-binding domain BF28_1120 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F BF28_1120 IPR006145 Pseudouridine synthase, RsuA/RluA BF28_1120 IPR020103 Pseudouridine synthase, catalytic domain superfamily BF28_1120 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain BF28_1120 IPR036986 RNA-binding S4 domain superfamily BF28_1120 IPR002942 RNA-binding S4 domain BF28_1120 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site BF28_1121 IPR004685 Branched-chain amino acid transport system II carrier protein BF28_1122 IPR019909 Haem uptake protein IsdC BF28_1122 IPR006635 NEAT domain BF28_1122 IPR037250 NEAT domain superfamily BF28_1122 IPR017502 Sortase B cell surface sorting signal BF28_1123 IPR006635 NEAT domain BF28_1123 IPR037250 NEAT domain superfamily BF28_1123 IPR017502 Sortase B cell surface sorting signal BF28_1124 IPR002491 ABC transporter periplasmic binding domain BF28_1124 IPR019957 ABC transporter, high-affinity heme uptake system protein IsdE BF28_1125 IPR000522 ABC transporter, permease protein, BtuC-like BF28_1125 IPR037294 ABC transporter, BtuC-like BF28_1126 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_1126 IPR003439 ABC transporter-like BF28_1126 IPR003593 AAA+ ATPase domain BF28_1126 IPR017871 ABC transporter, conserved site BF28_1127 IPR009835 Sortase B family BF28_1127 IPR015986 Sortase B, Firmicutes BF28_1127 IPR023365 Sortase domain superfamily BF28_1127 IPR005754 Sortase family BF28_1128 IPR011008 Dimeric alpha-beta barrel BF28_1128 IPR023953 Heme oxygenase IsdG BF28_1128 IPR007138 Antibiotic biosynthesis monooxygenase domain BF28_113 IPR036038 Aminotransferase-like, PLP-dependent enzymes BF28_113 IPR017824 Aminodeoxychorismate lyase, class IV BF28_113 IPR001544 Aminotransferase class IV BF28_113 IPR018300 Aminotransferase, class IV, conserved site BF28_1130 IPR019614 S-adenosylmethionine-dependent methyltransferase BF28_1130 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BF28_1130 IPR041532 RlmI, PUA-like domain BF28_1130 IPR036974 PUA domain superfamily BF28_1130 IPR015947 PUA-like superfamily BF28_1130 IPR002478 PUA domain BF28_1131 IPR019240 Protein of unknown function DUF2196 BF28_1133 IPR039420 Transcriptional regulatory protein WalR-like BF28_1133 IPR011006 CheY-like superfamily BF28_1133 IPR001867 OmpR/PhoB-type DNA-binding domain BF28_1133 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_1133 IPR016032 Signal transduction response regulator, C-terminal effector BF28_1133 IPR001789 Signal transduction response regulator, receiver domain BF28_1134 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BF28_1134 IPR005467 Histidine kinase domain BF28_1134 IPR003594 Histidine kinase/HSP90-like ATPase BF28_1134 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BF28_1134 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BF28_1134 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BF28_1135 IPR003593 AAA+ ATPase domain BF28_1135 IPR003439 ABC transporter-like BF28_1135 IPR017871 ABC transporter, conserved site BF28_1135 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_114 IPR017926 Glutamine amidotransferase BF28_114 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain BF28_114 IPR029062 Class I glutamine amidotransferase-like BF28_1140 IPR034660 DinB/YfiT-like putative metalloenzymes BF28_1140 IPR007837 DNA damage-inducible protein DinB BF28_1142 IPR020845 AMP-binding, conserved site BF28_1142 IPR000873 AMP-dependent synthetase/ligase BF28_1142 IPR025110 AMP-binding enzyme, C-terminal domain BF28_1142 IPR042099 AMP-dependent synthetase-like superfamily BF28_1143 IPR009057 Homeobox-like domain superfamily BF28_1143 IPR001647 DNA-binding HTH domain, TetR-type BF28_1143 IPR013570 Transcription regulator YsiA, C-terminal BF28_1143 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily BF28_1144 IPR029045 ClpP/crotonase-like domain superfamily BF28_1144 IPR001753 Enoyl-CoA hydratase/isomerase BF28_1144 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site BF28_1145 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal BF28_1145 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site BF28_1145 IPR012255 Electron transfer flavoprotein, beta subunit BF28_1145 IPR033948 Electron transfer flavoprotein, beta subunit, N-terminal BF28_1145 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BF28_1146 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BF28_1146 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site BF28_1146 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal BF28_1146 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal BF28_1146 IPR001308 Electron transfer flavoprotein alpha subunit/FixB BF28_1146 IPR029035 DHS-like NAD/FAD-binding domain superfamily BF28_1146 IPR033947 Electron transfer flavoprotein, alpha subunit, N-terminal BF28_1147 IPR036249 Thioredoxin-like superfamily BF28_1147 IPR013766 Thioredoxin domain BF28_1147 IPR005746 Thioredoxin BF28_1147 IPR017937 Thioredoxin, conserved site BF28_1148 IPR004791 UvrABC system, subunit C BF28_1148 IPR036876 UVR domain superfamily BF28_1148 IPR038476 UvrC homology region 2 superfamily BF28_1148 IPR001943 UVR domain BF28_1148 IPR035901 GIY-YIG endonuclease superfamily BF28_1148 IPR000305 GIY-YIG endonuclease BF28_1148 IPR001162 UvrC family homology region BF28_1148 IPR010994 RuvA domain 2-like BF28_1149 IPR024096 NO signalling/Golgi transport ligand-binding domain superfamily BF28_1149 IPR019642 Protein of unknown function DUF2507 BF28_115 IPR019999 Anthranilate synthase component I-like BF28_115 IPR015890 Chorismate-utilising enzyme, C-terminal BF28_115 IPR005801 ADC synthase BF28_115 IPR006805 Anthranilate synthase component I, N-terminal BF28_1150 IPR011138 Succinate dehydrogenase cytochrome b558 subunit BF28_1150 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit BF28_1150 IPR016002 Succinate dehydrogenase cytochrome b558 subunit, Firmicute BF28_1150 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit BF28_1151 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily BF28_1151 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal BF28_1151 IPR011280 Succinate dehydrogenase/fumarate reductase flavoprotein subunit, low-GC Gram-positive bacteria BF28_1151 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily BF28_1151 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site BF28_1151 IPR036188 FAD/NAD(P)-binding domain superfamily BF28_1151 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain BF28_1152 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BF28_1152 IPR009051 Alpha-helical ferredoxin BF28_1152 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein BF28_1152 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal BF28_1152 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BF28_1152 IPR012675 Beta-grasp domain superfamily BF28_1152 IPR036010 2Fe-2S ferredoxin-like superfamily BF28_1153 IPR006683 Thioesterase domain BF28_1153 IPR029069 HotDog domain superfamily BF28_1154 IPR003709 Peptidase M15B BF28_1154 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily BF28_1155 IPR002898 MotA/TolQ/ExbB proton channel BF28_1155 IPR000540 Flagellar motor protein MotA, conserved site BF28_1156 IPR006665 OmpA-like domain BF28_1156 IPR036737 OmpA-like domain superfamily BF28_1156 IPR025713 Motility protein B, N-terminal domain BF28_1157 IPR006423 5-nucleotidase lipoprotein e(P4) BF28_1157 IPR023214 HAD superfamily BF28_1157 IPR036412 HAD-like superfamily BF28_1157 IPR005519 Acid phosphatase, class B-like BF28_1158 IPR025302 Domain of unknown function DUF4162 BF28_1158 IPR017871 ABC transporter, conserved site BF28_1158 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_1158 IPR003439 ABC transporter-like BF28_1158 IPR003593 AAA+ ATPase domain BF28_116 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme BF28_116 IPR001926 Pyridoxal-phosphate dependent enzyme BF28_116 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site BF28_116 IPR005859 Cysteine synthase CysK BF28_116 IPR005856 Cysteine synthase BF28_1160 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_1160 IPR036390 Winged helix DNA-binding domain superfamily BF28_1160 IPR000944 Transcription regulator Rrf2-type BF28_1161 IPR022357 Major intrinsic protein, conserved site BF28_1161 IPR023743 Aquaporin Z BF28_1161 IPR000425 Major intrinsic protein BF28_1161 IPR023271 Aquaporin-like BF28_1161 IPR034294 Aquaporin transporter BF28_1162 IPR032713 Putative multidrug resistance efflux transporter BF28_1163 IPR014710 RmlC-like jelly roll fold BF28_1163 IPR001387 Cro/C1-type helix-turn-helix domain BF28_1163 IPR011051 RmlC-like cupin domain superfamily BF28_1163 IPR010982 Lambda repressor-like, DNA-binding domain superfamily BF28_1163 IPR013096 Cupin 2, conserved barrel BF28_1164 IPR007168 Phage shock protein, PspC, N-terminal BF28_1166 IPR011006 CheY-like superfamily BF28_1166 IPR007492 LytTR DNA-binding domain BF28_1166 IPR001789 Signal transduction response regulator, receiver domain BF28_1167 IPR003018 GAF domain BF28_1167 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BF28_1167 IPR029016 GAF-like domain superfamily BF28_1167 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region BF28_1167 IPR010559 Signal transduction histidine kinase, internal region BF28_1167 IPR003594 Histidine kinase/HSP90-like ATPase BF28_1167 IPR005467 Histidine kinase domain BF28_1168 IPR003593 AAA+ ATPase domain BF28_1168 IPR003439 ABC transporter-like BF28_1168 IPR017871 ABC transporter, conserved site BF28_1168 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal BF28_1168 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_1169 IPR003439 ABC transporter-like BF28_1169 IPR003593 AAA+ ATPase domain BF28_1169 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_1169 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal BF28_1169 IPR017871 ABC transporter, conserved site BF28_117 IPR000397 Heat shock protein Hsp33 BF28_117 IPR016153 Heat shock protein Hsp33, N-terminal BF28_117 IPR016154 Heat shock protein Hsp33, C-terminal BF28_1170 IPR035906 MetI-like superfamily BF28_1170 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BF28_1172 IPR030678 Peptide/nickel binding protein, MppA-type BF28_1172 IPR039424 Solute-binding protein family 5 BF28_1172 IPR000914 Solute-binding protein family 5 domain BF28_1173 IPR011059 Metal-dependent hydrolase, composite domain superfamily BF28_1173 IPR006311 Twin-arginine translocation pathway, signal sequence BF28_1173 IPR013108 Amidohydrolase 3 BF28_1173 IPR032466 Metal-dependent hydrolase BF28_1174 IPR032466 Metal-dependent hydrolase BF28_1174 IPR013108 Amidohydrolase 3 BF28_1174 IPR006311 Twin-arginine translocation pathway, signal sequence BF28_1174 IPR011059 Metal-dependent hydrolase, composite domain superfamily BF28_1176 IPR006042 Xanthine/uracil permease BF28_1176 IPR006043 Xanthine/uracil/vitamin C permease BF28_1177 IPR016032 Signal transduction response regulator, C-terminal effector BF28_1177 IPR000792 Transcription regulator LuxR, C-terminal BF28_1177 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_1179 IPR018187 Asp/Glu racemase, active site 1 BF28_1179 IPR033134 Asp/Glu racemase, active site 2 BF28_1179 IPR001920 Asp/Glu racemase BF28_1179 IPR004391 Glutamate racemase BF28_1179 IPR015942 Asp/Glu/hydantoin racemase BF28_118 IPR004619 Type III pantothenate kinase BF28_1180 IPR019606 GerMN domain BF28_1181 IPR015847 Exoribonuclease, phosphorolytic domain 2 BF28_1181 IPR018336 Ribonuclease PH, conserved site BF28_1181 IPR002381 Ribonuclease PH, bacterial-type BF28_1181 IPR027408 PNPase/RNase PH domain superfamily BF28_1181 IPR020568 Ribosomal protein S5 domain 2-type fold BF28_1181 IPR036345 Exoribonuclease, PH domain 2 superfamily BF28_1181 IPR001247 Exoribonuclease, phosphorolytic domain 1 BF28_1182 IPR020922 dITP/XTP pyrophosphatase BF28_1182 IPR002637 Ham1-like protein BF28_1182 IPR029001 Inosine triphosphate pyrophosphatase-like BF28_1183 IPR000979 Phosphodiesterase MJ0936/Vps29 BF28_1183 IPR029052 Metallo-dependent phosphatase-like BF28_1183 IPR041802 YfcE-like, metallophosphatase domain BF28_1183 IPR024654 Calcineurin-like phosphoesterase domain, lpxH-type BF28_1183 IPR020935 Phosphodiesterase YfcE, conserved site BF28_1186 IPR004107 Integrase, SAM-like, N-terminal BF28_1186 IPR023009 Tyrosine recombinase XerC/XerD BF28_1186 IPR010998 Integrase/recombinase, N-terminal BF28_1186 IPR002104 Integrase, catalytic domain BF28_1186 IPR013762 Integrase-like, catalytic domain superfamily BF28_1186 IPR011010 DNA breaking-rejoining enzyme, catalytic core BF28_1186 IPR011931 Tyrosine recombinase XerC BF28_1189 IPR006120 Resolvase, HTH domain BF28_1189 IPR006118 Recombinase, conserved site BF28_1189 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily BF28_1189 IPR006119 Resolvase, N-terminal catalytic domain BF28_119 IPR037219 Peptidase M41-like BF28_119 IPR005936 Peptidase, FtsH BF28_119 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_119 IPR003959 ATPase, AAA-type, core BF28_119 IPR003593 AAA+ ATPase domain BF28_119 IPR003960 ATPase, AAA-type, conserved site BF28_119 IPR000642 Peptidase M41 BF28_119 IPR011546 Peptidase M41, FtsH extracellular BF28_119 IPR041569 AAA ATPase, AAA+ lid domain BF28_1198 IPR012544 Bacterial Pleckstrin homology domain BF28_1198 IPR021722 Uncharacterised domain YvbH-like, oligomerisation domain BF28_1198 IPR037063 Bacterial Pleckstrin homology domain superfamily BF28_1203 IPR037041 Trigger factor, C-terminal domain superfamily BF28_1203 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain BF28_1203 IPR008880 Trigger factor, C-terminal BF28_1203 IPR005215 Trigger factor BF28_1203 IPR008881 Trigger factor, ribosome-binding, bacterial BF28_1203 IPR027304 Trigger factor/SurA domain superfamily BF28_1203 IPR036611 Trigger factor ribosome-binding domain superfamily BF28_1204 IPR003959 ATPase, AAA-type, core BF28_1204 IPR019489 Clp ATPase, C-terminal BF28_1204 IPR004487 Clp protease, ATP-binding subunit ClpX BF28_1204 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_1204 IPR038366 Zinc finger, ClpX C4-type superfamily BF28_1204 IPR003593 AAA+ ATPase domain BF28_1204 IPR010603 Zinc finger, ClpX C4-type BF28_1205 IPR008269 Peptidase S16, Lon proteolytic domain BF28_1205 IPR003593 AAA+ ATPase domain BF28_1205 IPR003959 ATPase, AAA-type, core BF28_1205 IPR027065 Lon protease BF28_1205 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_1205 IPR008268 Peptidase S16, active site BF28_1205 IPR020568 Ribosomal protein S5 domain 2-type fold BF28_1205 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BF28_1205 IPR014251 Sporulation protease LonB BF28_1206 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BF28_1206 IPR027543 Lon protease, bacterial BF28_1206 IPR004815 Lon protease, bacterial/eukaryotic-type BF28_1206 IPR020568 Ribosomal protein S5 domain 2-type fold BF28_1206 IPR015947 PUA-like superfamily BF28_1206 IPR008268 Peptidase S16, active site BF28_1206 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_1206 IPR003111 Lon, substrate-binding domain BF28_1206 IPR003593 AAA+ ATPase domain BF28_1206 IPR027065 Lon protease BF28_1206 IPR008269 Peptidase S16, Lon proteolytic domain BF28_1206 IPR003959 ATPase, AAA-type, core BF28_1207 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC BF28_1207 IPR005225 Small GTP-binding protein domain BF28_1207 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_1207 IPR030393 EngB-type guanine nucleotide-binding (G) domain BF28_1207 IPR006073 GTP binding domain BF28_1208 IPR003718 OsmC/Ohr family BF28_1208 IPR036102 OsmC/Ohr superfamily BF28_1208 IPR019953 Organic hydroperoxide resistance protein famiy BF28_1208 IPR015946 K homology domain-like, alpha/beta BF28_1209 IPR000835 MarR-type HTH domain BF28_1209 IPR036390 Winged helix DNA-binding domain superfamily BF28_1209 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_121 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BF28_121 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal BF28_121 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain BF28_121 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal BF28_121 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal BF28_121 IPR012094 tRNA(Ile)-lysidine synthase BF28_1210 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily BF28_1210 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily BF28_1210 IPR036291 NAD(P)-binding domain superfamily BF28_1210 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase BF28_1210 IPR018214 Glutamyl-tRNA reductase, conserved site BF28_1210 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal BF28_1210 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain BF28_1210 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase BF28_1211 IPR002541 Cytochrome c assembly protein BF28_1212 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site BF28_1212 IPR022417 Porphobilinogen deaminase, N-terminal BF28_1212 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily BF28_1212 IPR022418 Porphobilinogen deaminase, C-terminal BF28_1212 IPR000860 Porphobilinogen deaminase BF28_1213 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily BF28_1213 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase BF28_1213 IPR039793 Uroporphyrinogen-III synthase BF28_1214 IPR001731 Delta-aminolevulinic acid dehydratase BF28_1214 IPR013785 Aldolase-type TIM barrel BF28_1214 IPR030656 Delta-aminolevulinic acid dehydratase, active site BF28_1215 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase BF28_1215 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BF28_1215 IPR005814 Aminotransferase class-III BF28_1215 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BF28_1215 IPR015424 Pyridoxal phosphate-dependent transferase BF28_1216 IPR036779 LysM domain superfamily BF28_1216 IPR018392 LysM domain BF28_1218 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding BF28_1218 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding BF28_1218 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily BF28_1218 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BF28_1218 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm BF28_1218 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain BF28_1218 IPR002303 Valine-tRNA ligase BF28_1218 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm BF28_1218 IPR033705 Valyl tRNA synthetase, anticodon-binding domain BF28_1218 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site BF28_1218 IPR002300 Aminoacyl-tRNA synthetase, class Ia BF28_1219 IPR004101 Mur ligase, C-terminal BF28_1219 IPR018109 Folylpolyglutamate synthetase, conserved site BF28_1219 IPR013221 Mur ligase, central BF28_1219 IPR001645 Folylpolyglutamate synthetase BF28_1219 IPR036615 Mur ligase, C-terminal domain superfamily BF28_1219 IPR036565 Mur-like, catalytic domain superfamily BF28_122 IPR014221 Sporulation stage II, protein E BF28_122 IPR001932 PPM-type phosphatase domain BF28_122 IPR036457 PPM-type phosphatase domain superfamily BF28_1221 IPR029001 Inosine triphosphate pyrophosphatase-like BF28_1221 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein BF28_1222 IPR001405 Uncharacterised protein family UPF0758 BF28_1222 IPR010994 RuvA domain 2-like BF28_1222 IPR025657 RadC-like JAB domain BF28_1222 IPR037518 MPN domain BF28_1222 IPR020891 Uncharacterised protein family UPF0758, conserved site BF28_1223 IPR004753 Cell shape determining protein MreB BF28_1224 IPR007221 Rod shape-determining protein MreC BF28_1224 IPR042175 Cell/Rod shape-determining protein MreC, domain 2 BF28_1224 IPR042177 Cell/Rod shape-determining protein MreC, domain 1 BF28_1226 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily BF28_1226 IPR005526 Septum formation inhibitor MinC, C-terminal BF28_1226 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal BF28_1226 IPR013033 Septum formation inhibitor MinC BF28_1227 IPR025501 ATP binding protein MinD BF28_1227 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_1227 IPR010223 ATP binding protein MinD, bacterial-type BF28_1227 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain BF28_1228 IPR011055 Duplicated hybrid motif BF28_1228 IPR016047 Peptidase M23 BF28_1229 IPR008915 Peptidase M50 BF28_1230 IPR004659 Ribonuclease E/G BF28_1230 IPR022967 RNA-binding domain, S1 BF28_1230 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G BF28_1230 IPR012340 Nucleic acid-binding, OB-fold BF28_1230 IPR003029 S1 domain BF28_1231 IPR018258 Ribosomal protein L21, conserved site BF28_1231 IPR028909 Ribosomal protein L21-like BF28_1231 IPR036164 L21-like superfamily BF28_1231 IPR001787 Ribosomal protein L21 BF28_1232 IPR007422 Cysteine protease Prp BF28_1232 IPR036764 Cysteine protease Prp superfamily BF28_1233 IPR018261 Ribosomal protein L27, conserved site BF28_1233 IPR001684 Ribosomal protein L27 BF28_1234 IPR037100 Sporulation initiation phosphotransferase B, C-terminal domain superfamily BF28_1234 IPR039506 SpoOB, alpha-helical domain BF28_1234 IPR016122 Sporulation initiation phosphotransferase B, C-terminal BF28_1234 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB BF28_1235 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_1235 IPR006074 GTP1/OBG, conserved site BF28_1235 IPR006073 GTP binding domain BF28_1235 IPR006169 GTP1/OBG domain BF28_1235 IPR015349 GTP-binding protein OBG, C-terminal BF28_1235 IPR031167 OBG-type guanine nucleotide-binding (G) domain BF28_1235 IPR036346 GTP-binding protein OBG, C-terminal domain superfamily BF28_1235 IPR014100 GTP-binding protein Obg/CgtA BF28_1235 IPR035101 GTP-binding protein, Obg-type BF28_1235 IPR005225 Small GTP-binding protein domain BF28_1235 IPR036726 GTP1/OBG domain superfamily BF28_1236 IPR039420 Transcriptional regulatory protein WalR-like BF28_1236 IPR001867 OmpR/PhoB-type DNA-binding domain BF28_1236 IPR016032 Signal transduction response regulator, C-terminal effector BF28_1236 IPR011006 CheY-like superfamily BF28_1236 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_1236 IPR001789 Signal transduction response regulator, receiver domain BF28_1237 IPR005467 Histidine kinase domain BF28_1237 IPR003594 Histidine kinase/HSP90-like ATPase BF28_1237 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BF28_1237 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BF28_1238 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_1238 IPR017871 ABC transporter, conserved site BF28_1238 IPR003439 ABC transporter-like BF28_1238 IPR003593 AAA+ ATPase domain BF28_1239 IPR003838 ABC transporter permease protein domain BF28_1239 IPR027022 ABC transporter permease protein, BceB-type BF28_1240 IPR027022 ABC transporter permease protein, BceB-type BF28_1240 IPR003838 ABC transporter permease protein domain BF28_1241 IPR018528 Prephenate dehydratase, conserved site BF28_1241 IPR001086 Prephenate dehydratase BF28_1241 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase BF28_1241 IPR002912 ACT domain BF28_1242 IPR011037 Pyruvate kinase-like, insert domain superfamily BF28_1242 IPR005163 3-alpha domain BF28_1242 IPR005302 Molybdenum cofactor sulfurase, C-terminal BF28_1243 IPR004173 3H domain BF28_1243 IPR013196 Helix-turn-helix, type 11 BF28_1243 IPR036390 Winged helix DNA-binding domain superfamily BF28_1243 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_1243 IPR026043 Transcription repressor NadR BF28_1243 IPR035922 3H domain superfamily BF28_1244 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BF28_1244 IPR015424 Pyridoxal phosphate-dependent transferase BF28_1244 IPR016454 Cysteine desulfurase BF28_1244 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BF28_1244 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site BF28_1244 IPR000192 Aminotransferase class V domain BF28_1245 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal BF28_1245 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain BF28_1245 IPR036188 FAD/NAD(P)-binding domain superfamily BF28_1245 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily BF28_1245 IPR005288 L-aspartate oxidase BF28_1245 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily BF28_1246 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal BF28_1246 IPR013785 Aldolase-type TIM barrel BF28_1246 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal BF28_1246 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal BF28_1246 IPR004393 Nicotinate-nucleotide pyrophosphorylase BF28_1246 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD BF28_1246 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily BF28_1247 IPR023515 Quinolinate synthase A, type 3 BF28_1247 IPR003473 Quinolinate synthetase A BF28_1247 IPR036094 Quinolinate synthetase A superfamily BF28_1248 IPR014248 Spore coat assembly protein SafA BF28_1248 IPR036779 LysM domain superfamily BF28_1248 IPR018392 LysM domain BF28_125 IPR003029 S1 domain BF28_125 IPR012340 Nucleic acid-binding, OB-fold BF28_125 IPR022967 RNA-binding domain, S1 BF28_1251 IPR011991 ArsR-like helix-turn-helix domain BF28_1251 IPR001845 HTH ArsR-type DNA-binding domain BF28_1251 IPR036390 Winged helix DNA-binding domain superfamily BF28_1251 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_1252 IPR000620 EamA domain BF28_1254 IPR002491 ABC transporter periplasmic binding domain BF28_1255 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 BF28_1255 IPR036267 RuvA, C-terminal domain superfamily BF28_1255 IPR011114 Holliday junction DNA helicase RuvA, C-terminal BF28_1255 IPR012340 Nucleic acid-binding, OB-fold BF28_1255 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial BF28_1255 IPR010994 RuvA domain 2-like BF28_1255 IPR000085 Bacterial DNA recombination protein RuvA BF28_1256 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_1256 IPR008823 RuvB C-terminal winged helix domain BF28_1256 IPR008824 RuvB-like P-loop domain BF28_1256 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_1256 IPR036390 Winged helix DNA-binding domain superfamily BF28_1256 IPR003593 AAA+ ATPase domain BF28_1256 IPR004605 DNA helicase, Holliday junction RuvB-type BF28_1256 IPR041445 RuvB, AAA lid domain BF28_1257 IPR021320 Protein of unknown function DUF2905 BF28_1258 IPR042118 QueA, domain 1 BF28_1258 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily BF28_1258 IPR042119 QueA, domain 2 BF28_1258 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA BF28_1259 IPR036511 Queuine tRNA-ribosyltransferase-like BF28_1259 IPR004803 tRNA-guanine transglycosylase BF28_1259 IPR002616 tRNA-guanine(15) transglycosylase-like BF28_1260 IPR003849 Preprotein translocase YajC BF28_1262 IPR023090 UPF0702, alpha/beta domain superfamily BF28_1262 IPR007353 Protein of unknown function DUF421 BF28_1263 IPR002797 Polysaccharide biosynthesis protein BF28_1263 IPR024923 Peptidoglycan biosynthesis protein, SpoVB-type BF28_1263 IPR014249 Sporulation stage V protein B BF28_1263 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain BF28_1264 IPR025716 Post-transcriptional regulator BF28_1265 IPR005665 Protein-export membrane protein SecF, bacterial BF28_1265 IPR022645 Protein-export membrane protein SecD/SecF, bacterial BF28_1265 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site BF28_1265 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial BF28_1265 IPR005791 Protein translocase subunit SecD BF28_1266 IPR036837 Cation efflux protein, cytoplasmic domain superfamily BF28_1266 IPR002524 Cation efflux protein BF28_1266 IPR027470 Cation efflux protein, cytoplasmic domain BF28_1266 IPR027469 Cation efflux transmembrane domain superfamily BF28_1267 IPR001667 DDH domain BF28_1267 IPR003156 DHHA1 domain BF28_1267 IPR004610 Bacterial RecJ exonuclease BF28_1267 IPR038763 DHH phosphoesterase superfamily BF28_1267 IPR018779 Single-stranded-DNA-specific exonuclease RecJ, C-terminal BF28_1267 IPR041122 RecJ, OB domain BF28_1268 IPR000836 Phosphoribosyltransferase domain BF28_1268 IPR005764 Adenine phosphoribosyl transferase BF28_1268 IPR029057 Phosphoribosyltransferase-like BF28_1269 IPR033655 RelA, TGS domain BF28_1269 IPR012676 TGS-like BF28_1269 IPR002912 ACT domain BF28_1269 IPR004811 RelA/SpoT family BF28_1269 IPR012675 Beta-grasp domain superfamily BF28_1269 IPR004095 TGS BF28_1269 IPR003607 HD/PDEase domain BF28_1269 IPR007685 RelA/SpoT BF28_127 IPR019074 Spore cortex biosynthesis protein, YabQ-like BF28_127 IPR014242 Spore cortex biosynthesis protein, YabQ BF28_1270 IPR003732 D-aminoacyl-tRNA deacylase DTD BF28_1270 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily BF28_1274 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit BF28_1274 IPR036621 Anticodon-binding domain superfamily BF28_1274 IPR004154 Anticodon-binding BF28_1274 IPR033656 Histidyl-anticodon-binding BF28_1274 IPR015807 Histidine-tRNA ligase BF28_1274 IPR006195 Aminoacyl-tRNA synthetase, class II BF28_1274 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain BF28_1275 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type BF28_1275 IPR029351 GAD domain BF28_1275 IPR004115 GAD-like domain superfamily BF28_1275 IPR004524 Aspartate-tRNA ligase, type 1 BF28_1275 IPR006195 Aminoacyl-tRNA synthetase, class II BF28_1275 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) BF28_1275 IPR012340 Nucleic acid-binding, OB-fold BF28_1275 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb BF28_1276 IPR035985 Ubiquitin-activating enzyme BF28_1276 IPR000594 THIF-type NAD/FAD binding fold BF28_1277 IPR017877 Myb-like domain BF28_1277 IPR014243 Transcription factor, RsfA BF28_1278 IPR003593 AAA+ ATPase domain BF28_1278 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal BF28_1278 IPR021886 MgsA AAA+ ATPase C-terminal BF28_1278 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_1278 IPR008824 RuvB-like P-loop domain BF28_1278 IPR032423 AAA C-terminal domain BF28_1279 IPR030489 Transcription regulator Rrf2-type, conserved site BF28_1279 IPR036390 Winged helix DNA-binding domain superfamily BF28_1279 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_1279 IPR000944 Transcription regulator Rrf2-type BF28_128 IPR022476 Sporulation protein YabP/YqfC BF28_128 IPR038705 YabP superfamily BF28_128 IPR012504 Sporulation protein YabP BF28_1280 IPR000192 Aminotransferase class V domain BF28_1280 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site BF28_1280 IPR016454 Cysteine desulfurase BF28_1280 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BF28_1280 IPR015424 Pyridoxal phosphate-dependent transferase BF28_1280 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BF28_1281 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BF28_1281 IPR023382 Adenine nucleotide alpha hydrolase-like domains BF28_1281 IPR004506 tRNA-specific 2-thiouridylase BF28_1283 IPR027785 UvrD-like helicase C-terminal domain BF28_1283 IPR041451 RecD-like DNA helicase, SH3 domain BF28_1283 IPR003593 AAA+ ATPase domain BF28_1283 IPR006345 RecD-like DNA helicase BF28_1283 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_1283 IPR029493 RecD helicase-like helix-hairpin-helix domain BF28_1287 IPR002549 Transmembrane protein TqsA-like BF28_1289 IPR002318 Alanine-tRNA ligase, class IIc BF28_1289 IPR012947 Threonyl/alanyl tRNA synthetase, SAD BF28_1289 IPR009000 Translation protein, beta-barrel domain superfamily BF28_1289 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily BF28_1289 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal BF28_1289 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria BF28_1289 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily BF28_1289 IPR018165 Alanyl-tRNA synthetase, class IIc, core domain BF28_1289 IPR003156 DHHA1 domain BF28_129 IPR025490 RNA-binding protein, HP1423 type BF28_129 IPR002942 RNA-binding S4 domain BF28_129 IPR036986 RNA-binding S4 domain superfamily BF28_1290 IPR009309 IreB regulatory phosphoprotein BF28_1291 IPR005227 Putative pre-16S rRNA nuclease BF28_1291 IPR037027 YqgF/RNase H-like domain superfamily BF28_1291 IPR012337 Ribonuclease H-like superfamily BF28_1291 IPR006641 YqgF/RNase H-like domain BF28_1292 IPR009711 Uncharacterised protein family UPF0473 BF28_1293 IPR003770 Endolytic murein transglycosylase BF28_1297 IPR006083 Phosphoribulokinase/uridine kinase BF28_1297 IPR026008 Uridine kinase BF28_1297 IPR000764 Uridine kinase-like BF28_1297 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_1298 IPR006359 Transcription elongation factor GreA BF28_1298 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily BF28_1298 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal BF28_1298 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily BF28_1298 IPR018151 Transcription elongation factor, GreA/GreB, conserved site BF28_1298 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal BF28_1298 IPR028624 Transcription elongation factor GreA/GreB BF28_1298 IPR023459 Transcription elongation factor GreA/GreB family BF28_1299 IPR001460 Penicillin-binding protein, transpeptidase BF28_1299 IPR005311 Penicillin-binding protein, dimerisation domain BF28_1299 IPR036138 Penicillin-binding protein, dimerisation domain superfamily BF28_1299 IPR012338 Beta-lactamase/transpeptidase-like BF28_130 IPR000878 Tetrapyrrole methylase BF28_130 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core BF28_130 IPR035013 YabN, N-terminal BF28_130 IPR035996 Tetrapyrrole methylase superfamily BF28_130 IPR014777 Tetrapyrrole methylase, subdomain 1 BF28_130 IPR024180 Bifunctional tetrapyrrole methylase/MazG NTP pyrophosphohydrolase, predicted BF28_130 IPR011551 NTP pyrophosphohydrolase MazG BF28_1302 IPR013216 Methyltransferase type 11 BF28_1302 IPR023553 Uncharacterised methyltransferase, YrrT BF28_1302 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BF28_1303 IPR000845 Nucleoside phosphorylase domain BF28_1303 IPR035994 Nucleoside phosphorylase superfamily BF28_1303 IPR010049 MTA/SAH nucleosidase BF28_1304 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site BF28_1304 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme BF28_1304 IPR001926 Pyridoxal-phosphate dependent enzyme BF28_1305 IPR015424 Pyridoxal phosphate-dependent transferase BF28_1305 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BF28_1305 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme BF28_1305 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BF28_1306 IPR039697 Iron-type alcohol dehydrogenase-like BF28_1306 IPR015590 Aldehyde dehydrogenase domain BF28_1306 IPR016162 Aldehyde dehydrogenase, N-terminal BF28_1306 IPR034789 Bifunctional aldehyde-alcohol dehydrogenase, C-terminal domain BF28_1306 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA BF28_1306 IPR016163 Aldehyde dehydrogenase, C-terminal BF28_1306 IPR016161 Aldehyde/histidinol dehydrogenase BF28_1306 IPR018211 Alcohol dehydrogenase, iron-type, conserved site BF28_1306 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase BF28_1307 IPR025418 YrhC-like protein BF28_1308 IPR002491 ABC transporter periplasmic binding domain BF28_1309 IPR000522 ABC transporter, permease protein, BtuC-like BF28_1309 IPR037294 ABC transporter, BtuC-like BF28_131 IPR024923 Peptidoglycan biosynthesis protein, SpoVB-type BF28_131 IPR002797 Polysaccharide biosynthesis protein BF28_131 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain BF28_1310 IPR003593 AAA+ ATPase domain BF28_1310 IPR003439 ABC transporter-like BF28_1310 IPR017871 ABC transporter, conserved site BF28_1310 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_1316 IPR032808 DoxX family BF28_1317 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BF28_1317 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain BF28_1317 IPR037523 Vicinal oxygen chelate (VOC) domain BF28_1317 IPR000486 Extradiol ring-cleavage dioxygenase, class I /II BF28_1319 IPR036329 Aromatic amino acid monoxygenase, C-terminal domain superfamily BF28_1319 IPR018301 Aromatic amino acid hydroxylase, iron/copper binding site BF28_1319 IPR019774 Aromatic amino acid hydroxylase, C-terminal BF28_1319 IPR036951 Aromatic amino acid hydroxylase superfamily BF28_1319 IPR001273 Aromatic amino acid hydroxylase BF28_1319 IPR005960 Phenylalanine-4-hydroxylase, monomeric form BF28_132 IPR014213 Sporulation stage V, protein T BF28_132 IPR039472 Sporulation stage V protein T, GAF domain BF28_132 IPR037914 SpoVT-AbrB domain superfamily BF28_132 IPR007159 SpoVT-AbrB domain BF28_132 IPR029016 GAF-like domain superfamily BF28_1320 IPR000209 Peptidase S8/S53 domain BF28_1320 IPR034213 Vpr-like peptidase, catalytic domain BF28_1320 IPR036852 Peptidase S8/S53 domain superfamily BF28_1320 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 BF28_1320 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily BF28_1320 IPR025965 FlgD Ig-like domain BF28_1320 IPR003137 PA domain BF28_1320 IPR023827 Peptidase S8, subtilisin, Asp-active site BF28_1320 IPR022398 Peptidase S8, subtilisin, His-active site BF28_1320 IPR023828 Peptidase S8, subtilisin, Ser-active site BF28_1320 IPR015500 Peptidase S8, subtilisin-related BF28_1327 IPR013595 Peptidase S33 tripeptidyl aminopeptidase-like, C-terminal BF28_1327 IPR029058 Alpha/Beta hydrolase fold BF28_1327 IPR000073 Alpha/beta hydrolase fold-1 BF28_1327 IPR000639 Epoxide hydrolase-like BF28_1329 IPR017850 Alkaline-phosphatase-like, core domain superfamily BF28_1329 IPR018299 Alkaline phosphatase, active site BF28_1329 IPR001952 Alkaline phosphatase BF28_133 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_133 IPR004576 Transcription-repair coupling factor BF28_133 IPR037235 TRCF-like, C-terminal domain BF28_133 IPR005118 Transcription-repair-coupling factor, C-terminal domain BF28_133 IPR036101 CarD-like/TRCF domain superfamily BF28_133 IPR014001 Helicase superfamily 1/2, ATP-binding domain BF28_133 IPR001650 Helicase, C-terminal BF28_133 IPR011545 DEAD/DEAH box helicase domain BF28_133 IPR003711 CarD-like/TRCF domain BF28_133 IPR041471 UvrB, interaction domain BF28_1331 IPR007685 RelA/SpoT BF28_1332 IPR000415 Nitroreductase-like BF28_1332 IPR029479 Nitroreductase BF28_1333 IPR001705 Ribosomal protein L33 BF28_1333 IPR018264 Ribosomal protein L33, conserved site BF28_1333 IPR011332 Zinc-binding ribosomal protein BF28_1333 IPR038584 Ribosomal protein L33 superfamily BF28_1334 IPR032599 Protein of unknown function DUF4901 BF28_1336 IPR001584 Integrase, catalytic core BF28_1336 IPR025948 HTH-like domain BF28_1336 IPR036397 Ribonuclease H superfamily BF28_1336 IPR038965 Transposase InsF-like BF28_1336 IPR012337 Ribonuclease H-like superfamily BF28_1338 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_1338 IPR013324 RNA polymerase sigma factor, region 3/4-like BF28_1338 IPR014284 RNA polymerase sigma-70 like domain BF28_1338 IPR014209 RNA polymerase sigma-K type BF28_1338 IPR013325 RNA polymerase sigma factor, region 2 BF28_1338 IPR000943 RNA polymerase sigma-70 BF28_1338 IPR007627 RNA polymerase sigma-70 region 2 BF28_1338 IPR007630 RNA polymerase sigma-70 region 4 BF28_1339 IPR033177 Phosphatidylserine decarboxylase BF28_1339 IPR003817 Phosphatidylserine decarboxylase-related BF28_1339 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 BF28_1341 IPR006549 HAD-superfamily hydrolase,subfamily IIIA BF28_1341 IPR006439 HAD hydrolase, subfamily IA BF28_1341 IPR023214 HAD superfamily BF28_1341 IPR010021 HAD-superfamily phosphatase, YqeG-like BF28_1341 IPR036412 HAD-like superfamily BF28_1342 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_1342 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain BF28_1342 IPR019988 GTP-binding protein, riobosome biogenesis, YqeH BF28_1342 IPR006073 GTP binding domain BF28_1343 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase BF28_1343 IPR022893 Shikimate dehydrogenase family BF28_1343 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal BF28_1343 IPR011342 Shikimate dehydrogenase BF28_1343 IPR041121 SDH, C-terminal BF28_1343 IPR036291 NAD(P)-binding domain superfamily BF28_1344 IPR035920 YhbY-like superfamily BF28_1344 IPR001890 RNA-binding, CRM domain BF28_1344 IPR017924 RNA-binding protein YhbY BF28_1345 IPR004821 Cytidyltransferase-like domain BF28_1345 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase BF28_1345 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BF28_1346 IPR005249 Conserved hypothetical protein CHP00488 BF28_1346 IPR006674 HD domain BF28_1346 IPR003607 HD/PDEase domain BF28_1347 IPR004394 Protein Iojap/ribosomal silencing factor RsfS BF28_1348 IPR041698 Methyltransferase domain 25 BF28_1348 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BF28_1349 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily BF28_1349 IPR036291 NAD(P)-binding domain superfamily BF28_1349 IPR000304 Pyrroline-5-carboxylate reductase BF28_1349 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain BF28_1349 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal BF28_135 IPR001328 Peptidyl-tRNA hydrolase BF28_135 IPR036416 Peptidyl-tRNA hydrolase superfamily BF28_135 IPR018171 Peptidyl-tRNA hydrolase, conserved site BF28_1350 IPR019554 Soluble ligand binding domain BF28_1350 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 BF28_1350 IPR004509 Competence protein ComEA, helix-hairpin-helix domain BF28_1350 IPR004787 Competence protein ComEA BF28_1350 IPR010994 RuvA domain 2-like BF28_1351 IPR002125 Cytidine and deoxycytidylate deaminase domain BF28_1351 IPR013404 Competence operon E, ComEB BF28_1351 IPR016193 Cytidine deaminase-like BF28_1351 IPR015517 Deoxycytidylate deaminase-related BF28_1351 IPR016192 APOBEC/CMP deaminase, zinc-binding BF28_1351 IPR035105 Deoxycytidylate deaminase domain BF28_1352 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BF28_1352 IPR025405 Domain of unknown function DUF4131 BF28_1352 IPR001279 Metallo-beta-lactamase BF28_1352 IPR004797 Competence protein ComEC/Rec2 BF28_1352 IPR004477 ComEC/Rec2-related protein BF28_1352 IPR035681 ComA-like, MBL domain BF28_1353 IPR025416 YqzM-like protein BF28_1354 IPR010372 DNA polymerase III delta, N-terminal BF28_1354 IPR005790 DNA polymerase III, delta subunit BF28_1354 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_1354 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal BF28_1355 IPR002583 Ribosomal protein S20 BF28_1355 IPR036510 Ribosomal protein S20 superfamily BF28_1356 IPR023430 Peptidase HybD-like domain superfamily BF28_1356 IPR005080 Peptidase A25, germination protease BF28_1358 IPR005225 Small GTP-binding protein domain BF28_1358 IPR000640 Elongation factor EFG, domain V-like BF28_1358 IPR035647 EF-G domain III/V-like BF28_1358 IPR004161 Translation elongation factor EFTu-like, domain 2 BF28_1358 IPR031157 Tr-type G domain, conserved site BF28_1358 IPR038363 LepA, C-terminal domain superfamily BF28_1358 IPR013842 GTP-binding protein LepA, C-terminal BF28_1358 IPR035654 Elongation factor 4, domain IV BF28_1358 IPR006297 Elongation factor 4 BF28_1358 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_1358 IPR000795 Transcription factor, GTP-binding domain BF28_1359 IPR002577 Helix-turn-helix, HxlR type BF28_1359 IPR036390 Winged helix DNA-binding domain superfamily BF28_1359 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_136 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type BF28_136 IPR005946 Ribose-phosphate pyrophosphokinase BF28_136 IPR029057 Phosphoribosyltransferase-like BF28_136 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain BF28_136 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site BF28_136 IPR000836 Phosphoribosyltransferase domain BF28_1360 IPR023404 Radical SAM, alpha/beta horseshoe BF28_1360 IPR004559 Heme chaperone HemW-like BF28_1360 IPR010723 HemN, C-terminal BF28_1360 IPR006638 Elp3/MiaB/NifB BF28_1360 IPR034505 Anaerobic coproporphyrinogen-III oxidase BF28_1360 IPR007197 Radical SAM BF28_1361 IPR023120 Winged helix-turn-helix transcription repressor, HrcA, inserted dimerising domain superfamily BF28_1361 IPR029016 GAF-like domain superfamily BF28_1361 IPR002571 Heat-inducible transcription repressor HrcA BF28_1361 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_1361 IPR036390 Winged helix DNA-binding domain superfamily BF28_1361 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal BF28_1362 IPR013805 GrpE nucleotide exchange factor, coiled-coil BF28_1362 IPR009012 GrpE nucleotide exchange factor, head BF28_1362 IPR000740 GrpE nucleotide exchange factor BF28_1363 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily BF28_1363 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily BF28_1363 IPR013126 Heat shock protein 70 family BF28_1363 IPR018181 Heat shock protein 70, conserved site BF28_1363 IPR012725 Chaperone DnaK BF28_1364 IPR012724 Chaperone DnaJ BF28_1364 IPR036869 Chaperone J-domain superfamily BF28_1364 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily BF28_1364 IPR002939 Chaperone DnaJ, C-terminal BF28_1364 IPR001305 Heat shock protein DnaJ, cysteine-rich domain BF28_1364 IPR008971 HSP40/DnaJ peptide-binding BF28_1364 IPR018253 DnaJ domain, conserved site BF28_1364 IPR001623 DnaJ domain BF28_1365 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BF28_1365 IPR004498 Ribosomal protein L11 methyltransferase BF28_1366 IPR029028 Alpha/beta knot methyltransferases BF28_1366 IPR015947 PUA-like superfamily BF28_1366 IPR006700 Ribosomal RNA small subunit methyltransferase E BF28_1366 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal BF28_1367 IPR002792 TRAM domain BF28_1367 IPR034557 Threonylcarbamoyladenosine tRNA methylthiotransferase BF28_1367 IPR023404 Radical SAM, alpha/beta horseshoe BF28_1367 IPR006638 Elp3/MiaB/NifB BF28_1367 IPR005839 Methylthiotransferase BF28_1367 IPR006467 MiaB-like tRNA modifying enzyme BF28_1367 IPR013848 Methylthiotransferase, N-terminal BF28_1367 IPR020612 Methylthiotransferase, conserved site BF28_1367 IPR038135 Methylthiotransferase, N-terminal domain superfamily BF28_1367 IPR007197 Radical SAM BF28_1368 IPR018278 Ribosomal protein S21, conserved site BF28_1368 IPR038380 Ribosomal protein S21 superfamily BF28_1368 IPR001911 Ribosomal protein S21 BF28_1369 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like BF28_1369 IPR042184 YqeY/Aim41, N-terminal domain BF28_1369 IPR019004 Uncharacterised protein YqeY/Aim41 BF28_1369 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 BF28_137 IPR005835 Nucleotidyl transferase domain BF28_137 IPR038009 GlmU, C-terminal LbH domain BF28_137 IPR018357 Hexapeptide transferase, conserved site BF28_137 IPR001451 Hexapeptide repeat BF28_137 IPR029044 Nucleotide-diphospho-sugar transferases BF28_137 IPR011004 Trimeric LpxA-like superfamily BF28_137 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase BF28_1370 IPR022477 Sporulation protein YqfC BF28_1370 IPR022476 Sporulation protein YabP/YqfC BF28_1371 IPR010690 Putative stage IV sporulation YqfD BF28_1372 IPR003714 PhoH-like protein BF28_1372 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_1373 IPR011621 Metal-dependent phosphohydrolase, 7TM intracellular domain BF28_1373 IPR006675 HDIG domain BF28_1373 IPR003607 HD/PDEase domain BF28_1373 IPR011624 Metal-dependent phosphohydrolase, 7TM extracellular domain BF28_1373 IPR006674 HD domain BF28_1374 IPR023091 Metalloprotease catalytic domain superfamily, predicted BF28_1374 IPR020549 Endoribonuclease YbeY, conserved site BF28_1374 IPR002036 Endoribonuclease YbeY BF28_1375 IPR000829 DAGK family BF28_1375 IPR033717 Undecaprenol kinase BF28_1375 IPR036945 Diacylglycerol kinase (DAGK) superfamily BF28_1376 IPR016193 Cytidine deaminase-like BF28_1376 IPR006262 Cytidine deaminase, homotetrameric BF28_1376 IPR002125 Cytidine and deoxycytidylate deaminase domain BF28_1376 IPR016192 APOBEC/CMP deaminase, zinc-binding BF28_1377 IPR030388 Era-type guanine nucleotide-binding (G) domain BF28_1377 IPR005225 Small GTP-binding protein domain BF28_1377 IPR015946 K homology domain-like, alpha/beta BF28_1377 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_1377 IPR009019 K homology domain superfamily, prokaryotic type BF28_1377 IPR005662 GTP-binding protein Era BF28_1377 IPR006073 GTP binding domain BF28_1377 IPR004044 K Homology domain, type 2 BF28_1379 IPR037278 ARFGAP/RecO-like zinc finger BF28_1379 IPR022572 DNA replication/recombination mediator RecO, N-terminal BF28_1379 IPR012340 Nucleic acid-binding, OB-fold BF28_1379 IPR003717 Recombination protein O, RecO BF28_1379 IPR042242 Recombination protein O, zinc-binding domain BF28_138 IPR007170 Stage V sporulation protein G BF28_138 IPR036751 Stage V sporulation protein G superfamily BF28_1380 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_1380 IPR016842 Protein of unknown function UCP026546, HtH-CBS BF28_1380 IPR036390 Winged helix DNA-binding domain superfamily BF28_1380 IPR000644 CBS domain BF28_1380 IPR013196 Helix-turn-helix, type 11 BF28_1381 IPR026565 Putative pyruvate, phosphate dikinase regulatory protein BF28_1381 IPR005177 Bifunctional kinase-pyrophosphorylase BF28_1382 IPR034151 Bacterial DnaG primase, TOPRIM domain BF28_1382 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily BF28_1382 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal BF28_1382 IPR002694 Zinc finger, CHC2-type BF28_1382 IPR013264 DNA primase, catalytic core, N-terminal BF28_1382 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily BF28_1382 IPR019475 DNA primase, DnaB-helicase binding domain BF28_1382 IPR006171 TOPRIM domain BF28_1382 IPR006295 DNA primase, DnaG BF28_1382 IPR030846 DNA primase DnaG, bacteria BF28_1382 IPR036977 DNA Primase, CHC2-type zinc finger BF28_1383 IPR007127 RNA polymerase sigma factor 70, region 1.1 BF28_1383 IPR007630 RNA polymerase sigma-70 region 4 BF28_1383 IPR007624 RNA polymerase sigma-70 region 3 BF28_1383 IPR000943 RNA polymerase sigma-70 BF28_1383 IPR042189 Sigma-70 factor, region 1.1 superfamily BF28_1383 IPR014284 RNA polymerase sigma-70 like domain BF28_1383 IPR013325 RNA polymerase sigma factor, region 2 BF28_1383 IPR012760 RNA polymerase sigma factor RpoD, C-terminal BF28_1383 IPR009042 RNA polymerase sigma-70 region 1.2 BF28_1383 IPR028630 RNA polymerase sigma factor RpoD BF28_1383 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_1383 IPR007627 RNA polymerase sigma-70 region 2 BF28_1383 IPR013324 RNA polymerase sigma factor, region 3/4-like BF28_1384 IPR012218 Cytochrome c, Bacillus subtilis c550-related BF28_1384 IPR036909 Cytochrome c-like domain superfamily BF28_1384 IPR009056 Cytochrome c-like domain BF28_1385 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BF28_1385 IPR006901 tRNA methyltransferase TrmK BF28_1386 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 BF28_1386 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal BF28_1386 IPR017221 GTP cyclohydrolase 1 type 2//Nif3, bacteria BF28_1386 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily BF28_1387 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase BF28_1389 IPR014001 Helicase superfamily 1/2, ATP-binding domain BF28_1389 IPR011545 DEAD/DEAH box helicase domain BF28_1389 IPR014014 RNA helicase, DEAD-box type, Q motif BF28_1389 IPR030881 DEAD-box ATP-dependent RNA helicase CshB BF28_1389 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_1389 IPR001650 Helicase, C-terminal BF28_139 IPR006056 RidA family BF28_139 IPR006175 YjgF/YER057c/UK114 family BF28_139 IPR019897 RidA, conserved site BF28_139 IPR035959 RutC-like superfamily BF28_1390 IPR013022 Xylose isomerase-like, TIM barrel domain BF28_1390 IPR001719 AP endonuclease 2 BF28_1390 IPR018246 AP endonuclease 2, zinc binding site BF28_1390 IPR036237 Xylose isomerase-like superfamily BF28_1391 IPR020277 Protein of unknown function DUF2624 BF28_1392 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal BF28_1392 IPR019264 Domain of unknown function DUF2179 BF28_1392 IPR003740 Uncharacterised membrane protein YitT BF28_1393 IPR003439 ABC transporter-like BF28_1393 IPR003593 AAA+ ATPase domain BF28_1393 IPR017871 ABC transporter, conserved site BF28_1393 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_1394 IPR037294 ABC transporter, BtuC-like BF28_1394 IPR001626 ABC transporter, TroCD-like BF28_1395 IPR002481 Ferric-uptake regulator BF28_1395 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_1395 IPR036390 Winged helix DNA-binding domain superfamily BF28_1396 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial BF28_1396 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type BF28_1396 IPR011005 Dihydropteroate synthase-like BF28_140 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_140 IPR036390 Winged helix DNA-binding domain superfamily BF28_140 IPR029057 Phosphoribosyltransferase-like BF28_140 IPR015265 Bacterial purine repressor, N-terminal BF28_140 IPR010078 Pur operon repressor BF28_140 IPR000836 Phosphoribosyltransferase domain BF28_1400 IPR001189 Manganese/iron superoxide dismutase BF28_1400 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily BF28_1400 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily BF28_1400 IPR019833 Manganese/iron superoxide dismutase, binding site BF28_1400 IPR019831 Manganese/iron superoxide dismutase, N-terminal BF28_1400 IPR019832 Manganese/iron superoxide dismutase, C-terminal BF28_1401 IPR036259 MFS transporter superfamily BF28_1401 IPR011701 Major facilitator superfamily BF28_1403 IPR024370 PBP domain BF28_1403 IPR011862 Phosphate binding protein BF28_1404 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BF28_1404 IPR035906 MetI-like superfamily BF28_1404 IPR011864 Phosphate ABC transporter, permease protein PstC BF28_1405 IPR005672 Phosphate transport system permease protein PstA BF28_1405 IPR035906 MetI-like superfamily BF28_1405 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BF28_1406 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_1406 IPR017871 ABC transporter, conserved site BF28_1406 IPR005670 Phosphate transport system permease protein 1 BF28_1406 IPR015850 ABC transporter, phosphate import, PstB BF28_1406 IPR003439 ABC transporter-like BF28_1406 IPR003593 AAA+ ATPase domain BF28_1407 IPR038078 PhoU-like domain superfamily BF28_1407 IPR028366 Phosphate transport system protein PhoU BF28_1407 IPR026022 PhoU domain BF28_1408 IPR029044 Nucleotide-diphospho-sugar transferases BF28_1408 IPR005835 Nucleotidyl transferase domain BF28_1408 IPR037538 UTP--glucose-1-phosphate uridylyltransferase, cyanobacteria BF28_1409 IPR038584 Ribosomal protein L33 superfamily BF28_1409 IPR001705 Ribosomal protein L33 BF28_1409 IPR018264 Ribosomal protein L33, conserved site BF28_1409 IPR011332 Zinc-binding ribosomal protein BF28_141 IPR013750 GHMP kinase, C-terminal domain BF28_141 IPR006204 GHMP kinase N-terminal domain BF28_141 IPR036554 GHMP kinase, C-terminal domain superfamily BF28_141 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BF28_141 IPR020568 Ribosomal protein S5 domain 2-type fold BF28_141 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase BF28_1410 IPR002698 5-formyltetrahydrofolate cyclo-ligase BF28_1410 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily BF28_1410 IPR037171 NagB/RpiA transferase-like BF28_1411 IPR009256 Protein of unknown function DUF910 BF28_1411 IPR023164 YqgQ-like superfamily BF28_1412 IPR000600 ROK family BF28_1412 IPR004654 Glucokinase ROK BF28_1413 IPR024490 Protein of unknown function DUF2759 BF28_1414 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BF28_1414 IPR001279 Metallo-beta-lactamase BF28_1416 IPR011991 ArsR-like helix-turn-helix domain BF28_1416 IPR001845 HTH ArsR-type DNA-binding domain BF28_1416 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_1416 IPR036390 Winged helix DNA-binding domain superfamily BF28_1418 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BF28_1418 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BF28_1418 IPR015424 Pyridoxal phosphate-dependent transferase BF28_1418 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme BF28_1419 IPR015424 Pyridoxal phosphate-dependent transferase BF28_1419 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BF28_1419 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme BF28_1419 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BF28_142 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site BF28_142 IPR001448 Small acid-soluble spore protein, alpha/beta-type BF28_1420 IPR003726 Homocysteine-binding domain BF28_1420 IPR029041 FAD-linked oxidoreductase-like BF28_1420 IPR036589 Homocysteine-binding domain superfamily BF28_1420 IPR003171 Methylenetetrahydrofolate reductase BF28_1421 IPR003726 Homocysteine-binding domain BF28_1421 IPR011005 Dihydropteroate synthase-like BF28_1421 IPR036724 Cobalamin-binding domain superfamily BF28_1421 IPR011822 Cobalamin-dependent methionine synthase BF28_1421 IPR036589 Homocysteine-binding domain superfamily BF28_1421 IPR033706 Methionine synthase, B12-binding domain BF28_1421 IPR006158 Cobalamin (vitamin B12)-binding domain BF28_1421 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain BF28_1421 IPR036594 Methionine synthase domain BF28_1421 IPR004223 Vitamin B12-dependent methionine synthase, activation domain BF28_1421 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily BF28_1421 IPR000489 Pterin-binding domain BF28_1422 IPR007235 Glycosyl transferase, family 28, C-terminal BF28_1422 IPR006009 N-acetylglucosaminyltransferase, MurG BF28_1422 IPR004276 Glycosyltransferase family 28, N-terminal domain BF28_1428 IPR001991 Sodium:dicarboxylate symporter BF28_1428 IPR036458 Sodium:dicarboxylate symporter superfamily BF28_1429 IPR020254 Protein of unknown function DUF2626 BF28_143 IPR009366 Protein Veg BF28_1431 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_1431 IPR003593 AAA+ ATPase domain BF28_1431 IPR001482 Type II/IV secretion system protein BF28_1432 IPR003004 GspF/PilC family BF28_1432 IPR018076 Type II secretion system F domain BF28_1432 IPR042094 Type II secretion system F domain superfamily BF28_1432 IPR001992 Type II secretion system conserved site BF28_1434 IPR016785 ComG operon protein 4 BF28_1434 IPR012902 Prokaryotic N-terminal methylation site BF28_1434 IPR002416 Type II secretion system protein H BF28_1439 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_1439 IPR000623 Shikimate kinase/Threonine synthase-like 1 BF28_1439 IPR031322 Shikimate kinase/gluconokinase BF28_144 IPR008764 Peptidase U57, YabG BF28_1440 IPR025622 YqzE-like protein BF28_1444 IPR024562 Uncharacterised protein family YqhG BF28_1445 IPR001650 Helicase, C-terminal BF28_1445 IPR038718 SNF2-like, N-terminal domain superfamily BF28_1445 IPR000330 SNF2-related, N-terminal domain BF28_1445 IPR014001 Helicase superfamily 1/2, ATP-binding domain BF28_1445 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_1446 IPR006223 Glycine cleavage system T protein BF28_1446 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain BF28_1446 IPR028896 Aminomethyltransferase-like BF28_1446 IPR022903 Glycine cleavage system T protein, bacteria BF28_1446 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal BF28_1446 IPR006222 Aminomethyltransferase, folate-binding domain BF28_1446 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 BF28_1447 IPR015424 Pyridoxal phosphate-dependent transferase BF28_1447 IPR020581 Glycine cleavage system P protein BF28_1447 IPR023010 Probable glycine dehydrogenase (decarboxylating) subunit 1 BF28_1447 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BF28_1447 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BF28_1448 IPR023012 Probable glycine dehydrogenase (decarboxylating) subunit 2 BF28_1448 IPR015424 Pyridoxal phosphate-dependent transferase BF28_1448 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BF28_1448 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BF28_1448 IPR020581 Glycine cleavage system P protein BF28_145 IPR011530 Ribosomal RNA adenine dimethylase BF28_145 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BF28_145 IPR023165 rRNA adenine dimethylase-like BF28_145 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site BF28_145 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal BF28_145 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm BF28_1451 IPR000524 Transcription regulator HTH, GntR BF28_1451 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_1451 IPR036390 Winged helix DNA-binding domain superfamily BF28_1452 IPR017871 ABC transporter, conserved site BF28_1452 IPR003593 AAA+ ATPase domain BF28_1452 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_1452 IPR003439 ABC transporter-like BF28_1459 IPR000390 Small multidrug resistance protein family BF28_146 IPR034141 Ribonuclease M5-like, TOPRIM domain BF28_146 IPR006171 TOPRIM domain BF28_146 IPR025156 Ribonuclease M5, C-terminal domain BF28_146 IPR004466 Ribonuclease M5 BF28_1460 IPR000390 Small multidrug resistance protein family BF28_1462 IPR000843 LacI-type HTH domain BF28_1462 IPR010982 Lambda repressor-like, DNA-binding domain superfamily BF28_1462 IPR001761 Periplasmic binding protein/LacI sugar binding domain BF28_1462 IPR028082 Periplasmic binding protein-like I BF28_1464 IPR036873 Rhodanese-like domain superfamily BF28_1464 IPR001763 Rhodanese-like domain BF28_1465 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain BF28_1465 IPR024898 Octanoyltransferase LipM BF28_1469 IPR034560 Spore photoproduct lyase, Bacilli type BF28_1469 IPR023897 Spore photoproduct lyase BF28_147 IPR032466 Metal-dependent hydrolase BF28_147 IPR015991 Uncharacterised hydrolase TatD-type BF28_147 IPR018228 Deoxyribonuclease, TatD-related, conserved site BF28_147 IPR001130 TatD family BF28_1470 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_1470 IPR001367 Iron dependent repressor, metal binding and dimerisation domain BF28_1470 IPR022689 Iron dependent repressor BF28_1470 IPR022897 HTH-type transcription regulator MntR BF28_1470 IPR022687 DTXR-type HTH domain BF28_1470 IPR036421 Iron dependent repressor, metal binding and dimerisation domain superfamily BF28_1470 IPR036390 Winged helix DNA-binding domain superfamily BF28_1472 IPR023214 HAD superfamily BF28_1472 IPR023198 Phosphoglycolate phosphatase-like, domain 2 BF28_1472 IPR036412 HAD-like superfamily BF28_1472 IPR006439 HAD hydrolase, subfamily IA BF28_1472 IPR041492 Haloacid dehalogenase-like hydrolase BF28_1473 IPR010787 Protein of unknown function DUF1385 BF28_1474 IPR024563 Uncharacterised protein family YqhR BF28_1475 IPR036441 Dehydroquinase, class II superfamily BF28_1475 IPR001874 Dehydroquinase, class II BF28_1475 IPR018509 Dehydroquinase, class II, conserved site BF28_1476 IPR001714 Peptidase M24, methionine aminopeptidase BF28_1476 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site BF28_1476 IPR000994 Peptidase M24 BF28_1476 IPR000587 Creatinase, N-terminal BF28_1476 IPR036005 Creatinase/aminopeptidase-like BF28_1476 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal BF28_1477 IPR020599 Translation elongation factor P/YeiP BF28_1477 IPR014722 Ribosomal protein L2, domain 2 BF28_1477 IPR012340 Nucleic acid-binding, OB-fold BF28_1477 IPR015365 Elongation factor P, C-terminal BF28_1477 IPR001059 Translation elongation factor P/YeiP, central BF28_1477 IPR013852 Translation elongation factor P/YeiP, conserved site BF28_1477 IPR011768 Translation elongation factor P BF28_1477 IPR013185 Translation elongation factor, KOW-like BF28_1477 IPR008991 Translation protein SH3-like domain superfamily BF28_148 IPR015413 Methionyl/Leucyl tRNA synthetase BF28_148 IPR023457 Methionine-tRNA synthetase, type 2 BF28_148 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding BF28_148 IPR012340 Nucleic acid-binding, OB-fold BF28_148 IPR033911 Methioninyl-tRNA synthetase core domain BF28_148 IPR002547 tRNA-binding domain BF28_148 IPR014758 Methionyl-tRNA synthetase BF28_148 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal BF28_148 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BF28_148 IPR041872 Methionyl-tRNA synthetase, anticodon-binding domain BF28_148 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site BF28_148 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding BF28_1481 IPR014217 Sporulation stage III, protein AA BF28_1481 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_1481 IPR003593 AAA+ ATPase domain BF28_1482 IPR014198 Stage III sporulation protein AB BF28_1483 IPR009570 Stage III sporulation protein AC BF28_1483 IPR025664 Stage III sporulation protein AC/AD family BF28_1484 IPR014211 Stage III sporulation protein AD BF28_1484 IPR025664 Stage III sporulation protein AC/AD family BF28_1485 IPR014194 Sporulation stage III, protein AE BF28_1486 IPR014245 Sporulation stage III, protein AF BF28_1487 IPR014195 Sporulation stage III, protein AG BF28_1488 IPR024232 Stage III sporulation protein AH-like BF28_1488 IPR038503 Stage III sporulation protein AH-like superfamily BF28_149 IPR007159 SpoVT-AbrB domain BF28_149 IPR040678 AbrB, C-terminal BF28_149 IPR037914 SpoVT-AbrB domain superfamily BF28_1490 IPR001882 Biotin-binding site BF28_1490 IPR000089 Biotin/lipoyl attachment BF28_1490 IPR011053 Single hybrid motif BF28_1490 IPR001249 Acetyl-CoA biotin carboxyl carrier BF28_1491 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase BF28_1491 IPR011054 Rudiment single hybrid motif BF28_1491 IPR016185 Pre-ATP-grasp domain superfamily BF28_1491 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain BF28_1491 IPR005482 Biotin carboxylase, C-terminal BF28_1491 IPR011764 Biotin carboxylation domain BF28_1491 IPR005481 Biotin carboxylase-like, N-terminal domain BF28_1491 IPR011761 ATP-grasp fold BF28_1492 IPR005531 Alkaline shock protein Asp23 BF28_1493 IPR035926 NusB-like superfamily BF28_1493 IPR011605 NusB antitermination factor BF28_1493 IPR006027 NusB/RsmB/TIM44 BF28_1494 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase BF28_1494 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site BF28_1494 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain BF28_1494 IPR036291 NAD(P)-binding domain superfamily BF28_1494 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain BF28_1495 IPR020579 Exonuclease VII, large subunit, C-terminal BF28_1495 IPR025824 OB-fold nucleic acid binding domain BF28_1495 IPR003753 Exonuclease VII, large subunit BF28_1496 IPR003761 Exonuclease VII, small subunit BF28_1496 IPR037004 Exonuclease VII, small subunit superfamily BF28_1497 IPR008949 Isoprenoid synthase domain superfamily BF28_1497 IPR000092 Polyprenyl synthetase BF28_1497 IPR033749 Polyprenyl synthetase, conserved site BF28_1498 IPR029061 Thiamin diphosphate-binding fold BF28_1498 IPR005477 Deoxyxylulose-5-phosphate synthase BF28_1498 IPR005475 Transketolase-like, pyrimidine-binding domain BF28_1498 IPR020826 Transketolase binding site BF28_1498 IPR033248 Transketolase, C-terminal domain BF28_1498 IPR005474 Transketolase, N-terminal BF28_1498 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II BF28_1499 IPR004538 Haemolysin A /rRNA methyltransferase TlyA BF28_1499 IPR002877 Ribosomal RNA methyltransferase FtsJ domain BF28_1499 IPR002942 RNA-binding S4 domain BF28_1499 IPR036986 RNA-binding S4 domain superfamily BF28_1499 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BF28_150 IPR018063 SAM-dependent methyltransferase RsmI, conserved site BF28_150 IPR008189 rRNA small subunit methyltransferase I BF28_150 IPR014777 Tetrapyrrole methylase, subdomain 1 BF28_150 IPR035996 Tetrapyrrole methylase superfamily BF28_150 IPR014776 Tetrapyrrole methylase, subdomain 2 BF28_150 IPR000878 Tetrapyrrole methylase BF28_1500 IPR001669 Arginine repressor BF28_1500 IPR020899 Arginine repressor, C-terminal BF28_1500 IPR036251 Arginine repressor, C-terminal domain superfamily BF28_1500 IPR020900 Arginine repressor, DNA-binding domain BF28_1500 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_1500 IPR036390 Winged helix DNA-binding domain superfamily BF28_1501 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_1501 IPR004604 DNA recombination/repair protein RecN BF28_1501 IPR038729 Rad50/SbcC-type AAA domain BF28_1502 IPR001478 PDZ domain BF28_1502 IPR041489 PDZ domain 6 BF28_1502 IPR036034 PDZ superfamily BF28_1502 IPR014219 Peptidase S55, sporulation stage IV, protein B BF28_1502 IPR009003 Peptidase S1, PA clan BF28_1502 IPR008763 Peptidase S55, SpoIVB BF28_1503 IPR016032 Signal transduction response regulator, C-terminal effector BF28_1503 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_1503 IPR012052 Sporulation transcription factor Spo0A BF28_1503 IPR014879 Sporulation initiation factor Spo0A, C-terminal BF28_1503 IPR011006 CheY-like superfamily BF28_1503 IPR001789 Signal transduction response regulator, receiver domain BF28_1504 IPR029501 Bacterial EndoU nuclease BF28_1504 IPR006829 LXG domain BF28_1507 IPR025550 YycC-like protein BF28_1508 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily BF28_1508 IPR030395 Glycerophosphodiester phosphodiesterase domain BF28_1509 IPR020138 Uncharacterised protein family YqzF BF28_151 IPR035901 GIY-YIG endonuclease superfamily BF28_151 IPR000305 GIY-YIG endonuclease BF28_1510 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 BF28_1510 IPR000014 PAS domain BF28_1510 IPR035965 PAS domain superfamily BF28_1510 IPR013767 PAS fold BF28_1510 IPR002078 RNA polymerase sigma factor 54 interaction domain BF28_1510 IPR003593 AAA+ ATPase domain BF28_1510 IPR025944 Sigma-54 interaction domain, conserved site BF28_1510 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 BF28_1510 IPR009057 Homeobox-like domain superfamily BF28_1510 IPR002197 DNA binding HTH domain, Fis-type BF28_1510 IPR036291 NAD(P)-binding domain superfamily BF28_1510 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_1511 IPR002505 Phosphate acetyl/butaryl transferase BF28_1511 IPR014079 Phosphate butyryltransferase BF28_1511 IPR012147 Phosphate acetyl/butyryltransferase BF28_1512 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain BF28_1512 IPR016211 Glutamate/phenylalanine/leucine/valine dehydrogenase, bacterial/archaeal BF28_1512 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal BF28_1512 IPR033524 Leu/Phe/Val dehydrogenases active site BF28_1512 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase BF28_1512 IPR036291 NAD(P)-binding domain superfamily BF28_1513 IPR000890 Aliphatic acid kinase, short-chain BF28_1513 IPR011245 Butyrate kinase BF28_1513 IPR023865 Aliphatic acid kinase, short-chain, conserved site BF28_1514 IPR023753 FAD/NAD(P)-binding domain BF28_1514 IPR036188 FAD/NAD(P)-binding domain superfamily BF28_1514 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily BF28_1514 IPR006258 Dihydrolipoamide dehydrogenase BF28_1514 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I BF28_1514 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BF28_1514 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site BF28_1515 IPR001017 Dehydrogenase, E1 component BF28_1515 IPR029061 Thiamin diphosphate-binding fold BF28_1516 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II BF28_1516 IPR029061 Thiamin diphosphate-binding fold BF28_1516 IPR033248 Transketolase, C-terminal domain BF28_1516 IPR005475 Transketolase-like, pyrimidine-binding domain BF28_1517 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily BF28_1517 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain BF28_1517 IPR036625 E3-binding domain superfamily BF28_1517 IPR004167 Peripheral subunit-binding domain BF28_1517 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site BF28_1517 IPR011053 Single hybrid motif BF28_1517 IPR000089 Biotin/lipoyl attachment BF28_1518 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB BF28_1518 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA BF28_1518 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site BF28_1519 IPR007353 Protein of unknown function DUF421 BF28_1519 IPR023090 UPF0702, alpha/beta domain superfamily BF28_152 IPR007848 Methyltransferase small domain BF28_152 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BF28_1520 IPR020084 NUDIX hydrolase, conserved site BF28_1520 IPR000086 NUDIX hydrolase domain BF28_1520 IPR015376 Zinc ribbon, NADH pyrophosphatase BF28_1520 IPR015797 NUDIX hydrolase-like domain superfamily BF28_1520 IPR022925 NADH pyrophosphatase NudC BF28_1521 IPR016787 Uncharacterised conserved protein UCP021328 BF28_1522 IPR009474 Putative bacilliredoxin, YphP/YqiW family BF28_1522 IPR036249 Thioredoxin-like superfamily BF28_1523 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BF28_1523 IPR018313 Solute-binding protein family 3, conserved site BF28_1523 IPR001320 Ionotropic glutamate receptor BF28_1524 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain BF28_1524 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BF28_1524 IPR035906 MetI-like superfamily BF28_1525 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_1525 IPR003593 AAA+ ATPase domain BF28_1525 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type BF28_1525 IPR003439 ABC transporter-like BF28_1525 IPR017871 ABC transporter, conserved site BF28_1526 IPR038323 Putative aromatic acid exporter, C-terminal domain superfamily BF28_1526 IPR021062 Putative aromatic acid exporter, C-terminal BF28_1526 IPR010343 Aromatic acid exporter family member 1 BF28_1527 IPR038063 L,D-transpeptidase catalytic domain-like BF28_1527 IPR005490 L,D-transpeptidase catalytic domain BF28_1529 IPR000182 GNAT domain BF28_1529 IPR016181 Acyl-CoA N-acyltransferase BF28_153 IPR010377 Initiation control protein YabA BF28_1530 IPR036264 Bacterial exopeptidase dimerisation domain BF28_1530 IPR010162 Peptidase M20B, peptidase T-like BF28_1530 IPR002933 Peptidase M20 BF28_1530 IPR011650 Peptidase M20, dimerisation domain BF28_1530 IPR008007 Peptidase M42 BF28_1530 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site BF28_1531 IPR001126 UmuC domain BF28_1531 IPR036775 DNA polymerase, Y-family, little finger domain superfamily BF28_1531 IPR024728 DNA polymerase type-Y, HhH motif BF28_1531 IPR017961 DNA polymerase, Y-family, little finger domain BF28_1531 IPR022880 DNA polymerase IV BF28_1533 IPR001279 Metallo-beta-lactamase BF28_1533 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BF28_1533 IPR013471 Ribonuclease Z/BN BF28_1534 IPR002912 ACT domain BF28_1534 IPR004643 Iron-sulphur-dependent L-serine dehydratase beta subunit BF28_1534 IPR029009 Allosteric substrate binding domain superfamily BF28_1534 IPR005131 Serine dehydratase beta chain BF28_1535 IPR004642 Serine dehydratase, alpha subunit BF28_1535 IPR005130 Serine dehydratase-like, alpha subunit BF28_1536 IPR000304 Pyrroline-5-carboxylate reductase BF28_1536 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain BF28_1536 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal BF28_1536 IPR036291 NAD(P)-binding domain superfamily BF28_1536 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily BF28_1537 IPR001279 Metallo-beta-lactamase BF28_1537 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BF28_1538 IPR002347 Short-chain dehydrogenase/reductase SDR BF28_1538 IPR020904 Short-chain dehydrogenase/reductase, conserved site BF28_1538 IPR036291 NAD(P)-binding domain superfamily BF28_154 IPR007557 PSP1, C-terminal BF28_1540 IPR012280 Semialdehyde dehydrogenase, dimerisation domain BF28_1540 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site BF28_1540 IPR036291 NAD(P)-binding domain superfamily BF28_1540 IPR000534 Semialdehyde dehydrogenase, NAD-binding BF28_1540 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 BF28_1541 IPR042195 ArgJ beta chain, C-terminal domain BF28_1541 IPR016117 ArgJ-like domain superfamily BF28_1541 IPR002813 Arginine biosynthesis protein ArgJ BF28_1542 IPR001048 Aspartate/glutamate/uridylate kinase BF28_1542 IPR037528 Acetylglutamate kinase ArgB BF28_1542 IPR036393 Acetylglutamate kinase-like superfamily BF28_1542 IPR004662 Acetylglutamate kinase family BF28_1543 IPR015424 Pyridoxal phosphate-dependent transferase BF28_1543 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BF28_1543 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BF28_1543 IPR005814 Aminotransferase class-III BF28_1543 IPR004636 Acetylornithine/Succinylornithine transaminase family BF28_1544 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily BF28_1544 IPR024904 Ornithine carbamoyltransferase BF28_1544 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain BF28_1544 IPR002292 Ornithine/putrescine carbamoyltransferase BF28_1544 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding BF28_1544 IPR006130 Aspartate/ornithine carbamoyltransferase BF28_1547 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_1547 IPR011008 Dimeric alpha-beta barrel BF28_1547 IPR036390 Winged helix DNA-binding domain superfamily BF28_1547 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain BF28_1547 IPR000485 AsnC-type HTH domain BF28_1547 IPR011991 ArsR-like helix-turn-helix domain BF28_1547 IPR019888 Transcription regulator AsnC-type BF28_1549 IPR008334 5'-Nucleotidase, C-terminal BF28_1549 IPR019931 LPXTG cell wall anchor domain BF28_1549 IPR029052 Metallo-dependent phosphatase-like BF28_1549 IPR041827 CpdB, N-terminal metallophosphatase domain BF28_1549 IPR006179 5'-Nucleotidase/apyrase BF28_1549 IPR006146 5'-Nucleotidase, conserved site BF28_1549 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type BF28_1549 IPR036907 5'-Nucleotidase, C-terminal domain superfamily BF28_155 IPR004622 DNA polymerase III, delta prime subunit BF28_155 IPR015199 DNA polymerase III, delta subunit, C-terminal BF28_155 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_1552 IPR005814 Aminotransferase class-III BF28_1552 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BF28_1552 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BF28_1552 IPR015424 Pyridoxal phosphate-dependent transferase BF28_1552 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA BF28_1553 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_1553 IPR004472 Dethiobiotin synthase BioD BF28_1554 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BF28_1554 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BF28_1554 IPR015424 Pyridoxal phosphate-dependent transferase BF28_1554 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site BF28_1554 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type BF28_1554 IPR004839 Aminotransferase, class I/classII BF28_1555 IPR013216 Methyltransferase type 11 BF28_1555 IPR000073 Alpha/beta hydrolase fold-1 BF28_1555 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC BF28_1555 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BF28_1555 IPR029058 Alpha/Beta hydrolase fold BF28_1556 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC BF28_1556 IPR025714 Methyltransferase domain BF28_1556 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BF28_1557 IPR010722 Biotin and thiamin synthesis-associated domain BF28_1557 IPR006638 Elp3/MiaB/NifB BF28_1557 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB BF28_1557 IPR007197 Radical SAM BF28_1557 IPR024177 Biotin synthase BF28_1557 IPR013785 Aldolase-type TIM barrel BF28_1559 IPR034964 Lumazine synthase BF28_1559 IPR002180 Lumazine/riboflavin synthase BF28_1559 IPR036467 Lumazine/riboflavin synthase superfamily BF28_156 IPR018095 Thymidylate kinase, conserved site BF28_156 IPR018094 Thymidylate kinase BF28_156 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_156 IPR039430 Thymidylate kinase-like domain BF28_1560 IPR036144 RibA-like superfamily BF28_1560 IPR016299 Riboflavin biosynthesis protein RibBA BF28_1560 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily BF28_1560 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB BF28_1560 IPR032677 GTP cyclohydrolase II BF28_1560 IPR000926 GTP cyclohydrolase II, RibA BF28_1561 IPR001783 Lumazine-binding protein BF28_1561 IPR017938 Riboflavin synthase-like beta-barrel BF28_1561 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily BF28_1561 IPR026017 Lumazine-binding domain BF28_1562 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal BF28_1562 IPR011549 Riboflavin-specific deaminase, C-terminal BF28_1562 IPR004794 Riboflavin biosynthesis protein RibD BF28_1562 IPR024072 Dihydrofolate reductase-like domain superfamily BF28_1562 IPR016193 Cytidine deaminase-like BF28_1562 IPR002125 Cytidine and deoxycytidylate deaminase domain BF28_1562 IPR016192 APOBEC/CMP deaminase, zinc-binding BF28_1564 IPR020157 Uncharacterised protein family YqkC BF28_1565 IPR029058 Alpha/Beta hydrolase fold BF28_1565 IPR022742 Serine aminopeptidase, S33 BF28_1566 IPR016181 Acyl-CoA N-acyltransferase BF28_1566 IPR000182 GNAT domain BF28_1567 IPR000843 LacI-type HTH domain BF28_1567 IPR010982 Lambda repressor-like, DNA-binding domain superfamily BF28_1567 IPR028082 Periplasmic binding protein-like I BF28_1568 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal BF28_1568 IPR032813 Putative Na+/H+ antiporter, N-terminal BF28_1569 IPR022742 Serine aminopeptidase, S33 BF28_1569 IPR029058 Alpha/Beta hydrolase fold BF28_1569 IPR002410 Peptidase S33 BF28_157 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BF28_157 IPR015424 Pyridoxal phosphate-dependent transferase BF28_157 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily BF28_157 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal BF28_157 IPR000310 Orn/Lys/Arg decarboxylase, major domain BF28_1571 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type BF28_1571 IPR008334 5'-Nucleotidase, C-terminal BF28_1571 IPR041831 Endonuclease YhcR, metallophosphatase domain BF28_1571 IPR036907 5'-Nucleotidase, C-terminal domain superfamily BF28_1571 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold BF28_1571 IPR035437 SNase-like, OB-fold superfamily BF28_1571 IPR012340 Nucleic acid-binding, OB-fold BF28_1571 IPR006146 5'-Nucleotidase, conserved site BF28_1571 IPR019931 LPXTG cell wall anchor domain BF28_1571 IPR019948 Gram-positive LPXTG cell wall anchor BF28_1571 IPR006179 5'-Nucleotidase/apyrase BF28_1571 IPR029052 Metallo-dependent phosphatase-like BF28_1573 IPR007344 GrpB/Dephospho-CoA kinase BF28_1573 IPR016181 Acyl-CoA N-acyltransferase BF28_1573 IPR000182 GNAT domain BF28_1574 IPR018170 Aldo/keto reductase, conserved site BF28_1574 IPR020471 Aldo/keto reductase BF28_1574 IPR036812 NADP-dependent oxidoreductase domain superfamily BF28_1574 IPR023210 NADP-dependent oxidoreductase domain BF28_1575 IPR036812 NADP-dependent oxidoreductase domain superfamily BF28_1575 IPR023210 NADP-dependent oxidoreductase domain BF28_1575 IPR020471 Aldo/keto reductase BF28_1576 IPR025177 Cell division inhibitor MciZ BF28_1577 IPR015797 NUDIX hydrolase-like domain superfamily BF28_1577 IPR004385 Nucleoside diphosphate pyrophosphatase BF28_1577 IPR000086 NUDIX hydrolase domain BF28_1577 IPR020084 NUDIX hydrolase, conserved site BF28_1579 IPR014196 Stage II sporulation protein M BF28_1579 IPR002798 Stage II sporulation protein M-like BF28_1580 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_1580 IPR036390 Winged helix DNA-binding domain superfamily BF28_1580 IPR002481 Ferric-uptake regulator BF28_1581 IPR025321 Protein of unknown function DUF4227 BF28_1582 IPR011010 DNA breaking-rejoining enzyme, catalytic core BF28_1582 IPR011932 Tyrosine recombinase XerD BF28_1582 IPR004107 Integrase, SAM-like, N-terminal BF28_1582 IPR010998 Integrase/recombinase, N-terminal BF28_1582 IPR002104 Integrase, catalytic domain BF28_1582 IPR013762 Integrase-like, catalytic domain superfamily BF28_1582 IPR023009 Tyrosine recombinase XerC/XerD BF28_1584 IPR024052 Phosphopentomutase DeoB cap domain superfamily BF28_1584 IPR017850 Alkaline-phosphatase-like, core domain superfamily BF28_1584 IPR010045 Phosphopentomutase BF28_1584 IPR006124 Metalloenzyme BF28_1585 IPR035994 Nucleoside phosphorylase superfamily BF28_1585 IPR011268 Purine nucleoside phosphorylase BF28_1585 IPR000845 Nucleoside phosphorylase domain BF28_1585 IPR018099 Purine phosphorylase, family 2, conserved site BF28_1585 IPR011270 Purine nucleoside phosphorylase I, inosine/guanosine-specific BF28_1586 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase BF28_1586 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site BF28_1586 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily BF28_1586 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily BF28_1586 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily BF28_1586 IPR000312 Glycosyl transferase, family 3 BF28_1586 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal BF28_1586 IPR017459 Glycosyl transferase family 3, N-terminal domain BF28_1586 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic BF28_1587 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB BF28_1587 IPR004488 Magnesium/cobalt transport protein CorA BF28_1588 IPR006043 Xanthine/uracil/vitamin C permease BF28_1590 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_1590 IPR036390 Winged helix DNA-binding domain superfamily BF28_1590 IPR000835 MarR-type HTH domain BF28_1594 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_1594 IPR003593 AAA+ ATPase domain BF28_1594 IPR003439 ABC transporter-like BF28_1595 IPR036390 Winged helix DNA-binding domain superfamily BF28_1595 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_1595 IPR000524 Transcription regulator HTH, GntR BF28_1596 IPR012338 Beta-lactamase/transpeptidase-like BF28_1596 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A BF28_1596 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal BF28_1596 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal BF28_1596 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily BF28_1596 IPR015956 Penicillin-binding protein, C-terminal domain superfamily BF28_1597 IPR003658 Anti-sigma factor antagonist BF28_1597 IPR014237 Anti-sigma F factor antagonist BF28_1597 IPR002645 STAS domain BF28_1597 IPR036513 STAS domain superfamily BF28_1598 IPR010194 Anti-sigma F factor BF28_1598 IPR003594 Histidine kinase/HSP90-like ATPase BF28_1598 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BF28_1599 IPR007624 RNA polymerase sigma-70 region 3 BF28_1599 IPR013324 RNA polymerase sigma factor, region 3/4-like BF28_1599 IPR013325 RNA polymerase sigma factor, region 2 BF28_1599 IPR007630 RNA polymerase sigma-70 region 4 BF28_1599 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_1599 IPR014284 RNA polymerase sigma-70 like domain BF28_1599 IPR014322 RNA polymerase sigma-B/F/G type BF28_1599 IPR014236 RNA polymerase sigma-F type BF28_1599 IPR000943 RNA polymerase sigma-70 BF28_1599 IPR007627 RNA polymerase sigma-70 region 2 BF28_1600 IPR000175 Sodium:neurotransmitter symporter BF28_1600 IPR037272 Sodium:neurotransmitter symporter superfamily BF28_1602 IPR038548 Stage V sporulation protein AA, N-terminal domain superfamily BF28_1602 IPR021997 Stage V sporulation protein AA BF28_1603 IPR020144 Stage V sporulation protein AB BF28_1604 IPR005562 SpoVA BF28_1604 IPR014203 Sporulation stage V, protein AC BF28_1605 IPR010894 Stage V sporulation AD BF28_1605 IPR038369 Stage V sporulation AD superfamily BF28_1605 IPR016039 Thiolase-like BF28_1606 IPR014204 Sporulation stage V, protein AE BF28_1606 IPR005562 SpoVA BF28_1607 IPR025914 Stage V sporulation protein AE BF28_1608 IPR004995 Bacillus/Clostridium Ger spore germination protein BF28_1609 IPR000150 Cof family BF28_1609 IPR036412 HAD-like superfamily BF28_1609 IPR006379 HAD-superfamily hydrolase, subfamily IIB BF28_1609 IPR023214 HAD superfamily BF28_1610 IPR009343 Protein of unknown function DUF1002 BF28_1611 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase BF28_1611 IPR029000 Cyclophilin-like domain superfamily BF28_1611 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site BF28_1611 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain BF28_1612 IPR000182 GNAT domain BF28_1612 IPR016181 Acyl-CoA N-acyltransferase BF28_1613 IPR005500 Protein of unknown function DUF309 BF28_1613 IPR023203 TTHA0068-like superfamily BF28_1615 IPR003768 Segregation and condensation protein A BF28_1615 IPR023093 ScpA-like, C-terminal BF28_1616 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_1616 IPR036390 Winged helix DNA-binding domain superfamily BF28_1616 IPR005234 Chromosome segregation/condensation protein ScpB BF28_1618 IPR003764 N-acetylglucosamine-6-phosphate deacetylase BF28_1618 IPR011059 Metal-dependent hydrolase, composite domain superfamily BF28_1618 IPR006680 Amidohydrolase-related BF28_1618 IPR032466 Metal-dependent hydrolase BF28_1619 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase BF28_1619 IPR018321 Glucosamine-6-phosphate isomerase, conserved site BF28_1619 IPR037171 NagB/RpiA transferase-like BF28_1619 IPR004547 Glucosamine-6-phosphate isomerase BF28_1622 IPR001550 Transcription antiterminator, conserved site BF28_1622 IPR036634 PRD domain superfamily BF28_1622 IPR011608 PRD domain BF28_1622 IPR036650 CAT RNA-binding domain superfamily BF28_1622 IPR004341 CAT RNA-binding domain BF28_1623 IPR001996 Phosphotransferase system, IIB component, type 1 BF28_1623 IPR013013 Phosphotransferase system, EIIC component, type 1 BF28_1623 IPR003352 Phosphotransferase system, EIIC BF28_1623 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component BF28_1623 IPR011055 Duplicated hybrid motif BF28_1623 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site BF28_1623 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 BF28_1623 IPR036878 Glucose permease domain IIB BF28_1623 IPR011299 PTS system glucose-specific IIBC component BF28_1624 IPR035895 HPr-like superfamily BF28_1624 IPR002114 Phosphotransferase system, HPr serine phosphorylation site BF28_1624 IPR000032 Phosphocarrier protein HPr-like BF28_1624 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site BF28_1625 IPR036618 PtsI, HPr-binding domain superfamily BF28_1625 IPR008731 Phosphotransferase system, enzyme I N-terminal BF28_1625 IPR006318 Phosphotransferase system, enzyme I-like BF28_1625 IPR024692 Phosphotransferase system, enzyme I BF28_1625 IPR008279 PEP-utilising enzyme, mobile domain BF28_1625 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily BF28_1625 IPR040442 Pyruvate kinase-like domain superfamily BF28_1625 IPR023151 PEP-utilising enzyme, conserved site BF28_1625 IPR000121 PEP-utilising enzyme, C-terminal BF28_1625 IPR036637 Phosphohistidine domain superfamily BF28_1625 IPR018274 PEP-utilising enzyme, active site BF28_1628 IPR029479 Nitroreductase BF28_1628 IPR000415 Nitroreductase-like BF28_1629 IPR029787 Nucleotide cyclase BF28_1629 IPR000160 GGDEF domain BF28_163 IPR010001 SigmaK-factor processing regulatory BofA BF28_1630 IPR036291 NAD(P)-binding domain superfamily BF28_1630 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily BF28_1630 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site BF28_1630 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding BF28_1630 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain BF28_1630 IPR015815 3-hydroxyisobutyrate dehydrogenase-related BF28_1630 IPR013328 6-phosphogluconate dehydrogenase, domain 2 BF28_1633 IPR014710 RmlC-like jelly roll fold BF28_1633 IPR011051 RmlC-like cupin domain superfamily BF28_1633 IPR004313 Acireductone dioxygenase ARD family BF28_1633 IPR023956 Acireductone dioxygenase ARD, bacteria BF28_1634 IPR036409 Class II aldolase/adducin N-terminal domain superfamily BF28_1634 IPR017714 Methylthioribulose-1-phosphate dehydratase BF28_1634 IPR001303 Class II aldolase/adducin N-terminal BF28_1635 IPR036412 HAD-like superfamily BF28_1635 IPR023214 HAD superfamily BF28_1635 IPR017718 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase BF28_1635 IPR006384 Pyridoxal phosphate phosphatase-related BF28_1636 IPR000685 Ribulose bisphosphate carboxylase, large subunit, C-terminal BF28_1636 IPR036422 RuBisCO large subunit, N-terminal domain superfamily BF28_1636 IPR017717 2,3-diketo-5-methylthiopentyl-1-phosphate enolase BF28_1636 IPR033966 RuBisCO BF28_1636 IPR036376 Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily BF28_1636 IPR017443 Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal BF28_1637 IPR015424 Pyridoxal phosphate-dependent transferase BF28_1637 IPR004839 Aminotransferase, class I/classII BF28_1637 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BF28_1637 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BF28_1638 IPR003010 Carbon-nitrogen hydrolase BF28_1638 IPR036526 Carbon-nitrogen hydrolase superfamily BF28_1639 IPR011009 Protein kinase-like domain superfamily BF28_1639 IPR002575 Aminoglycoside phosphotransferase BF28_1639 IPR009212 Methylthioribose kinase BF28_164 IPR019644 Protein of unknown function DUF2508 BF28_1642 IPR002347 Short-chain dehydrogenase/reductase SDR BF28_1642 IPR011294 3-hydroxybutyrate dehydrogenase BF28_1642 IPR036291 NAD(P)-binding domain superfamily BF28_1642 IPR020904 Short-chain dehydrogenase/reductase, conserved site BF28_1643 IPR005149 Transcription regulator PadR, N-terminal BF28_1643 IPR036390 Winged helix DNA-binding domain superfamily BF28_1643 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_1649 IPR015797 NUDIX hydrolase-like domain superfamily BF28_1649 IPR020084 NUDIX hydrolase, conserved site BF28_1649 IPR020476 NUDIX hydrolase BF28_1649 IPR000086 NUDIX hydrolase domain BF28_165 IPR015967 Recombination protein RecR, conserved site BF28_165 IPR006171 TOPRIM domain BF28_165 IPR034137 RecR, TOPRIM domain BF28_165 IPR023627 Recombination protein RecR BF28_165 IPR000093 DNA recombination protein RecR BF28_165 IPR023628 Recombination protein RecR, C4-type zinc finger BF28_1650 IPR002155 Thiolase BF28_1650 IPR016039 Thiolase-like BF28_1650 IPR020615 Thiolase, acyl-enzyme intermediate active site BF28_1650 IPR020610 Thiolase, active site BF28_1650 IPR020617 Thiolase, C-terminal BF28_1650 IPR020613 Thiolase, conserved site BF28_1650 IPR020616 Thiolase, N-terminal BF28_1651 IPR001238 DNA-binding, RecF BF28_1651 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_1651 IPR042174 DNA-binding RecF, domain 2 BF28_1651 IPR003395 RecF/RecN/SMC, N-terminal BF28_1657 IPR020904 Short-chain dehydrogenase/reductase, conserved site BF28_1657 IPR036291 NAD(P)-binding domain superfamily BF28_1657 IPR002347 Short-chain dehydrogenase/reductase SDR BF28_1658 IPR017871 ABC transporter, conserved site BF28_1658 IPR003593 AAA+ ATPase domain BF28_1658 IPR003439 ABC transporter-like BF28_1658 IPR040582 MalK, OB fold domain BF28_1658 IPR008995 Molybdate/tungstate binding, C-terminal BF28_1658 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_1658 IPR005116 Transport-associated OB, type 1 BF28_1659 IPR032091 Maltogenic Amylase, C-terminal BF28_1659 IPR013780 Glycosyl hydrolase, all-beta BF28_1659 IPR017853 Glycoside hydrolase superfamily BF28_1659 IPR006047 Glycosyl hydrolase, family 13, catalytic domain BF28_166 IPR004401 Nucleoid-associated protein YbaB/EbfC family BF28_166 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily BF28_1660 IPR032091 Maltogenic Amylase, C-terminal BF28_1660 IPR006047 Glycosyl hydrolase, family 13, catalytic domain BF28_1660 IPR004185 Glycoside hydrolase, family 13, N-terminal Ig-like domain BF28_1660 IPR013780 Glycosyl hydrolase, all-beta BF28_1660 IPR017853 Glycoside hydrolase superfamily BF28_1660 IPR013783 Immunoglobulin-like fold BF28_1661 IPR006059 Bacterial extracellular solute-binding protein BF28_1661 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein BF28_1662 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BF28_1662 IPR035906 MetI-like superfamily BF28_1663 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BF28_1663 IPR035906 MetI-like superfamily BF28_1664 IPR010982 Lambda repressor-like, DNA-binding domain superfamily BF28_1664 IPR000843 LacI-type HTH domain BF28_1664 IPR028082 Periplasmic binding protein-like I BF28_1664 IPR001761 Periplasmic binding protein/LacI sugar binding domain BF28_1665 IPR015424 Pyridoxal phosphate-dependent transferase BF28_1665 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site BF28_1665 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BF28_1665 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BF28_1665 IPR004839 Aminotransferase, class I/classII BF28_1667 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BF28_1667 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BF28_1667 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BF28_1667 IPR005467 Histidine kinase domain BF28_1667 IPR003594 Histidine kinase/HSP90-like ATPase BF28_1667 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BF28_1669 IPR029476 Deoxyribonuclease NucA/NucB BF28_167 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal BF28_167 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_167 IPR012763 DNA polymerase III, subunit gamma/ tau BF28_167 IPR001270 ClpA/B family BF28_167 IPR003593 AAA+ ATPase domain BF28_167 IPR022754 DNA polymerase III, gamma subunit, domain III BF28_1671 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal BF28_1671 IPR038071 UROD/MetE-like superfamily BF28_1671 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal BF28_1671 IPR006276 Cobalamin-independent methionine synthase BF28_1673 IPR004638 Drug resistance transporter EmrB-like BF28_1673 IPR036259 MFS transporter superfamily BF28_1673 IPR020846 Major facilitator superfamily domain BF28_1673 IPR011701 Major facilitator superfamily BF28_1678 IPR025552 YkyB-like protein BF28_1679 IPR003695 Ppx/GppA phosphatase BF28_168 IPR016193 Cytidine deaminase-like BF28_168 IPR016192 APOBEC/CMP deaminase, zinc-binding BF28_168 IPR002125 Cytidine and deoxycytidylate deaminase domain BF28_168 IPR028883 tRNA-specific adenosine deaminase BF28_1680 IPR003414 Polyphosphate kinase BF28_1680 IPR036832 Polyphosphate kinase N-terminal domain superfamily BF28_1680 IPR025198 Polyphosphate kinase N-terminal domain BF28_1680 IPR025200 Polyphosphate kinase C-terminal domain 2 BF28_1680 IPR036830 Polyphosphate kinase middle domain superfamily BF28_1680 IPR024953 Polyphosphate kinase middle domain BF28_1680 IPR041108 Polyphosphate kinase, C-terminal domain 1 BF28_1682 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type BF28_1682 IPR006311 Twin-arginine translocation pathway, signal sequence BF28_1682 IPR029052 Metallo-dependent phosphatase-like BF28_1682 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal BF28_1683 IPR002347 Short-chain dehydrogenase/reductase SDR BF28_1683 IPR036291 NAD(P)-binding domain superfamily BF28_1684 IPR018842 YkuI, C-terminal BF28_1684 IPR029151 Periplasmic sensor-like domain superfamily BF28_1684 IPR035919 EAL domain superfamily BF28_1684 IPR001633 EAL domain BF28_1687 IPR038073 YkuJ-like superfamily BF28_1687 IPR014904 Protein of unknown function DUF1797 BF28_1689 IPR007405 Bacteriophage KVP40, Orf299 BF28_169 IPR000868 Isochorismatase-like BF28_169 IPR036380 Isochorismatase-like superfamily BF28_1692 IPR036390 Winged helix DNA-binding domain superfamily BF28_1692 IPR000847 Transcription regulator HTH, LysR BF28_1692 IPR005119 LysR, substrate-binding BF28_1692 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_1693 IPR019873 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase, DapH BF28_1693 IPR013710 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase, N-terminal BF28_1693 IPR001451 Hexapeptide repeat BF28_1693 IPR011004 Trimeric LpxA-like superfamily BF28_1693 IPR018357 Hexapeptide transferase, conserved site BF28_1694 IPR002933 Peptidase M20 BF28_1694 IPR023905 Acetyldiaminopimelate deacetylase BF28_1694 IPR011650 Peptidase M20, dimerisation domain BF28_1694 IPR017439 Amidohydrolase BF28_1694 IPR036264 Bacterial exopeptidase dimerisation domain BF28_1696 IPR036291 NAD(P)-binding domain superfamily BF28_1696 IPR006037 Regulator of K+ conductance, C-terminal BF28_1696 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily BF28_1696 IPR003148 Regulator of K+ conductance, N-terminal BF28_1697 IPR041636 Ribonuclease J, C-terminal BF28_1697 IPR001587 Ribonuclease J, conserved site BF28_1697 IPR001279 Metallo-beta-lactamase BF28_1697 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BF28_1697 IPR030854 Ribonuclease J, bacteria BF28_1697 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain BF28_1697 IPR042173 Ribonuclease J, domain 2 BF28_1697 IPR004613 Ribonuclease J BF28_1699 IPR036412 HAD-like superfamily BF28_1699 IPR006379 HAD-superfamily hydrolase, subfamily IIB BF28_1699 IPR000150 Cof family BF28_1699 IPR023214 HAD superfamily BF28_170 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_170 IPR031314 Deoxynucleoside kinase domain BF28_170 IPR002624 Deoxynucleoside kinase BF28_1700 IPR023635 Peptide deformylase BF28_1700 IPR036821 Peptide deformylase superfamily BF28_1702 IPR001017 Dehydrogenase, E1 component BF28_1702 IPR017596 Pyruvate dehydrogenase E1 component subunit alpha/BCKADH E1-alpha BF28_1702 IPR029061 Thiamin diphosphate-binding fold BF28_1703 IPR005475 Transketolase-like, pyrimidine-binding domain BF28_1703 IPR033248 Transketolase, C-terminal domain BF28_1703 IPR029061 Thiamin diphosphate-binding fold BF28_1703 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II BF28_1704 IPR004167 Peripheral subunit-binding domain BF28_1704 IPR036625 E3-binding domain superfamily BF28_1704 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily BF28_1704 IPR000089 Biotin/lipoyl attachment BF28_1704 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain BF28_1704 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site BF28_1704 IPR011053 Single hybrid motif BF28_1705 IPR023753 FAD/NAD(P)-binding domain BF28_1705 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily BF28_1705 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BF28_1705 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I BF28_1705 IPR006258 Dihydrolipoamide dehydrogenase BF28_1705 IPR036188 FAD/NAD(P)-binding domain superfamily BF28_1705 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site BF28_171 IPR002624 Deoxynucleoside kinase BF28_171 IPR031314 Deoxynucleoside kinase domain BF28_171 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_1712 IPR020916 Protein-glutamine gamma-glutamyltransferase, bacteria BF28_1713 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BF28_1713 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BF28_1713 IPR015424 Pyridoxal phosphate-dependent transferase BF28_1713 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal BF28_1713 IPR000310 Orn/Lys/Arg decarboxylase, major domain BF28_1713 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily BF28_1714 IPR007920 Protein of unknown function UPF0223 BF28_1714 IPR023324 BH2638-like superfamily BF28_1715 IPR009403 Protein of unknown function UPF0637 BF28_1717 IPR000760 Inositol monophosphatase-like BF28_1717 IPR020550 Inositol monophosphatase, conserved site BF28_1717 IPR020583 Inositol monophosphatase, metal-binding site BF28_1720 IPR025620 YlaH-like protein BF28_1722 IPR019241 Protein of unknown function DUF2197 BF28_1724 IPR002716 PIN domain BF28_1724 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_1724 IPR003714 PhoH-like protein BF28_1724 IPR029060 PIN-like domain superfamily BF28_1726 IPR036270 UPF0358 superfamily BF28_1726 IPR009983 Uncharacterised protein family UPF0358 BF28_1727 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site BF28_1727 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA BF28_1728 IPR011764 Biotin carboxylation domain BF28_1728 IPR000089 Biotin/lipoyl attachment BF28_1728 IPR011053 Single hybrid motif BF28_1728 IPR003379 Carboxylase, conserved domain BF28_1728 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain BF28_1728 IPR016185 Pre-ATP-grasp domain superfamily BF28_1728 IPR011054 Rudiment single hybrid motif BF28_1728 IPR005482 Biotin carboxylase, C-terminal BF28_1728 IPR000891 Pyruvate carboxyltransferase BF28_1728 IPR005930 Pyruvate carboxylase BF28_1728 IPR005481 Biotin carboxylase-like, N-terminal domain BF28_1728 IPR013785 Aldolase-type TIM barrel BF28_1728 IPR011761 ATP-grasp fold BF28_1729 IPR003780 COX15/CtaA family BF28_1729 IPR023755 Heme A synthase, type 1 BF28_1730 IPR006369 Protohaem IX farnesyltransferase BF28_1730 IPR000537 UbiA prenyltransferase family BF28_1730 IPR030470 UbiA prenyltransferase conserved site BF28_1731 IPR014222 Cytochrome c oxidase, subunit II BF28_1731 IPR036909 Cytochrome c-like domain superfamily BF28_1731 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain BF28_1731 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily BF28_1731 IPR009056 Cytochrome c-like domain BF28_1731 IPR001505 Copper centre Cu(A) BF28_1731 IPR002429 Cytochrome c oxidase subunit II-like C-terminal BF28_1731 IPR008972 Cupredoxin BF28_1732 IPR036927 Cytochrome c oxidase-like, subunit I superfamily BF28_1732 IPR014241 Cytochrome c oxidase, subunit I bacterial type BF28_1732 IPR023616 Cytochrome c oxidase-like, subunit I domain BF28_1732 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site BF28_1732 IPR000883 Cytochrome c oxidase subunit I BF28_1733 IPR035973 Cytochrome c oxidase subunit III-like superfamily BF28_1733 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle BF28_1733 IPR033946 Ubiquinol oxidase subunit III domain BF28_1733 IPR000298 Cytochrome c oxidase subunit III-like BF28_1733 IPR024791 Cytochrome c oxidase subunit III BF28_1734 IPR014257 Cytochrome c oxidase, subunit IV bacillaceae BF28_1734 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes BF28_1735 IPR019108 Cytochrome c oxidase caa3-type, assembly factor CtaG-related BF28_1735 IPR014108 Cytochrome c oxidase caa3 type assembly factor CtaG BF28_1736 IPR022843 Formamidase BF28_1736 IPR003010 Carbon-nitrogen hydrolase BF28_1736 IPR036526 Carbon-nitrogen hydrolase superfamily BF28_1737 IPR036491 YugN-like superfamily BF28_1737 IPR014967 Uncharacterised protein family, YugN-like BF28_1738 IPR035940 CAP superfamily BF28_1738 IPR014044 CAP domain BF28_1738 IPR029410 CAP-associated domain BF28_1739 IPR025953 Putative coat protein YlbD BF28_174 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm BF28_174 IPR033729 Serine-tRNA ligase catalytic core domain BF28_174 IPR042103 Serine-tRNA synthetase, type1, N-terminal domain superfamily BF28_174 IPR006195 Aminoacyl-tRNA synthetase, class II BF28_174 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) BF28_174 IPR015866 Serine-tRNA synthetase, type1, N-terminal BF28_174 IPR002317 Serine-tRNA ligase, type1 BF28_1740 IPR025613 YlbE-like protein BF28_1741 IPR029033 Histidine phosphatase superfamily BF28_1741 IPR013078 Histidine phosphatase superfamily, clade-1 BF28_1741 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site BF28_1742 IPR010368 Control of competence regulator ComK, YlbF/YmcA BF28_1742 IPR023378 YheA/YmcA-like domain superfamily BF28_1743 IPR016979 Protein of unknown function DUF2129 BF28_1745 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BF28_1745 IPR004398 RNA methyltransferase, RsmD BF28_1746 IPR014226 Sporulation integral membrane protein YlbJ BF28_1746 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain BF28_1747 IPR001980 Phosphopantetheine adenylyltransferase BF28_1747 IPR004821 Cytidyltransferase-like domain BF28_1747 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BF28_1748 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase BF28_1748 IPR002641 Patatin-like phospholipase domain BF28_1748 IPR001423 Lysophospholipase patatin, conserved site BF28_1749 IPR027065 Lon protease BF28_1749 IPR020568 Ribosomal protein S5 domain 2-type fold BF28_1749 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BF28_1749 IPR001478 PDZ domain BF28_1749 IPR008269 Peptidase S16, Lon proteolytic domain BF28_1749 IPR036034 PDZ superfamily BF28_1749 IPR039381 Endopeptidase La, PDZ domain BF28_175 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO BF28_175 IPR021196 PdxT/SNO family, conserved site BF28_175 IPR029062 Class I glutamine amidotransferase-like BF28_1750 IPR008513 tRNA(Met) cytidine acetate ligase BF28_1750 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BF28_1751 IPR003772 Large ribosomal RNA subunit accumulation protein YceD BF28_1752 IPR002677 Ribosomal protein L32p BF28_1752 IPR011332 Zinc-binding ribosomal protein BF28_1753 IPR017930 Myb domain BF28_1753 IPR009057 Homeobox-like domain superfamily BF28_1753 IPR014243 Transcription factor, RsfA BF28_1754 IPR016181 Acyl-CoA N-acyltransferase BF28_1754 IPR000182 GNAT domain BF28_1754 IPR017274 Putative N-acetyltransferase YlbP BF28_1755 IPR036291 NAD(P)-binding domain superfamily BF28_1755 IPR013332 Ketopantoate reductase, N-terminal domain BF28_1755 IPR013752 Ketopantoate reductase, C-terminal domain BF28_1755 IPR003710 Ketopantoate reductase ApbA/PanE BF28_1755 IPR013328 6-phosphogluconate dehydrogenase, domain 2 BF28_1755 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily BF28_1756 IPR011199 Bacillithiol biosynthesis BshC BF28_1757 IPR002903 Ribosomal RNA small subunit methyltransferase H BF28_1757 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BF28_1757 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily BF28_1758 IPR007060 Septum formation initiator FtsL/DivIC BF28_1758 IPR011922 Cell division protein FtsL BF28_176 IPR013785 Aldolase-type TIM barrel BF28_176 IPR011060 Ribulose-phosphate binding barrel BF28_176 IPR033755 PdxS/SNZ N-terminal domain BF28_176 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ BF28_1760 IPR005543 PASTA domain BF28_1760 IPR012338 Beta-lactamase/transpeptidase-like BF28_1760 IPR036138 Penicillin-binding protein, dimerisation domain superfamily BF28_1760 IPR011927 Stage V sporulation protein D BF28_1760 IPR001460 Penicillin-binding protein, transpeptidase BF28_1760 IPR005311 Penicillin-binding protein, dimerisation domain BF28_1761 IPR036565 Mur-like, catalytic domain superfamily BF28_1761 IPR004101 Mur ligase, C-terminal BF28_1761 IPR036615 Mur ligase, C-terminal domain superfamily BF28_1761 IPR013221 Mur ligase, central BF28_1761 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase BF28_1761 IPR035911 MurE/MurF, N-terminal BF28_1761 IPR000713 Mur ligase, N-terminal catalytic domain BF28_1762 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site BF28_1762 IPR000715 Glycosyl transferase, family 4 BF28_1762 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase BF28_1763 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase BF28_1763 IPR013221 Mur ligase, central BF28_1763 IPR004101 Mur ligase, C-terminal BF28_1763 IPR036565 Mur-like, catalytic domain superfamily BF28_1763 IPR036615 Mur ligase, C-terminal domain superfamily BF28_1764 IPR013438 Sporulation stage V, protein E BF28_1764 IPR013437 Probable peptidoglycan glycosyltransferase FtsW BF28_1764 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA BF28_1764 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site BF28_1765 IPR007235 Glycosyl transferase, family 28, C-terminal BF28_1765 IPR004276 Glycosyltransferase family 28, N-terminal domain BF28_1765 IPR006009 N-acetylglucosaminyltransferase, MurG BF28_1766 IPR016166 FAD-binding domain, PCMH-type BF28_1766 IPR016167 FAD-binding, type PCMH, subdomain 1 BF28_1766 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase BF28_1766 IPR006094 FAD linked oxidase, N-terminal BF28_1766 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily BF28_1766 IPR016169 FAD-binding, type PCMH, subdomain 2 BF28_1766 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal BF28_1766 IPR036318 FAD-binding, type PCMH-like superfamily BF28_1767 IPR026580 Cell division protein DivIB BF28_1767 IPR005548 Cell division protein FtsQ/DivIB BF28_1767 IPR034746 POTRA domain BF28_1767 IPR013685 POTRA domain, FtsQ-type BF28_1768 IPR020823 Cell division protein FtsA BF28_1768 IPR003494 SHS2 domain inserted in FtsA BF28_1769 IPR020805 Cell division protein FtsZ, conserved site BF28_1769 IPR000158 Cell division protein FtsZ BF28_1769 IPR008280 Tubulin/FtsZ, C-terminal BF28_1769 IPR024757 Cell division protein FtsZ, C-terminal BF28_1769 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain BF28_1769 IPR036525 Tubulin/FtsZ, GTPase domain superfamily BF28_1769 IPR037103 Tubulin/FtsZ, C-terminal domain superfamily BF28_1769 IPR003008 Tubulin/FtsZ, GTPase domain BF28_177 IPR012338 Beta-lactamase/transpeptidase-like BF28_177 IPR015956 Penicillin-binding protein, C-terminal domain superfamily BF28_177 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A BF28_177 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal BF28_177 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily BF28_177 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal BF28_1770 IPR005081 Sigma-E processing peptidase SpoIIGA BF28_1771 IPR014200 RNA polymerase sigma-E type BF28_1771 IPR007630 RNA polymerase sigma-70 region 4 BF28_1771 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_1771 IPR013325 RNA polymerase sigma factor, region 2 BF28_1771 IPR013324 RNA polymerase sigma factor, region 3/4-like BF28_1771 IPR000943 RNA polymerase sigma-70 BF28_1771 IPR014284 RNA polymerase sigma-70 like domain BF28_1771 IPR007627 RNA polymerase sigma-70 region 2 BF28_1772 IPR013324 RNA polymerase sigma factor, region 3/4-like BF28_1772 IPR007624 RNA polymerase sigma-70 region 3 BF28_1772 IPR014284 RNA polymerase sigma-70 like domain BF28_1772 IPR013325 RNA polymerase sigma factor, region 2 BF28_1772 IPR014212 RNA polymerase sigma-G type BF28_1772 IPR000943 RNA polymerase sigma-70 BF28_1772 IPR007627 RNA polymerase sigma-70 region 2 BF28_1772 IPR007630 RNA polymerase sigma-70 region 4 BF28_1772 IPR014322 RNA polymerase sigma-B/F/G type BF28_1773 IPR027275 PRC-barrel domain BF28_1773 IPR011033 PRC-barrel-like superfamily BF28_1773 IPR014238 Sporulation protein YlmC/YmxH BF28_1775 IPR011078 Pyridoxal phosphate homeostasis protein BF28_1775 IPR029066 PLP-binding barrel BF28_1775 IPR001608 Alanine racemase, N-terminal BF28_1776 IPR038594 SepF-like superfamily BF28_1776 IPR007561 Cell division protein SepF/SepF-related BF28_1776 IPR023052 Cell division protein SepF BF28_1777 IPR003425 CCB3/YggT BF28_1778 IPR002942 RNA-binding S4 domain BF28_1778 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily BF28_1778 IPR040591 YlmH, putative RNA-binding domain BF28_1778 IPR036986 RNA-binding S4 domain superfamily BF28_1779 IPR007793 DivIVA family BF28_1779 IPR019933 DivIVA domain BF28_178 IPR013785 Aldolase-type TIM barrel BF28_178 IPR015875 IMP dehydrogenase / GMP reductase, conserved site BF28_178 IPR005990 Inosine-5'-monophosphate dehydrogenase BF28_178 IPR000644 CBS domain BF28_178 IPR001093 IMP dehydrogenase/GMP reductase BF28_1780 IPR002300 Aminoacyl-tRNA synthetase, class Ia BF28_1780 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding BF28_1780 IPR010663 Zinc finger, FPG/IleRS-type BF28_1780 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site BF28_1780 IPR033708 Isoleucyl tRNA synthetase type 1, anticodon-binding domain BF28_1780 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding BF28_1780 IPR023585 Isoleucine-tRNA ligase, type 1 BF28_1780 IPR002301 Isoleucine-tRNA ligase BF28_1780 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain BF28_1780 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BF28_1782 IPR001872 Peptidase A8, signal peptidase II BF28_1783 IPR002942 RNA-binding S4 domain BF28_1783 IPR020103 Pseudouridine synthase, catalytic domain superfamily BF28_1783 IPR006225 Pseudouridine synthase, RluC/RluD BF28_1783 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site BF28_1783 IPR006145 Pseudouridine synthase, RsuA/RluA BF28_1783 IPR036986 RNA-binding S4 domain superfamily BF28_1784 IPR000836 Phosphoribosyltransferase domain BF28_1784 IPR023050 Bifunctional protein PyrR BF28_1784 IPR029057 Phosphoribosyltransferase-like BF28_1785 IPR006043 Xanthine/uracil/vitamin C permease BF28_1785 IPR029935 Uracil permease BF28_1785 IPR006042 Xanthine/uracil permease BF28_1786 IPR006130 Aspartate/ornithine carbamoyltransferase BF28_1786 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding BF28_1786 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain BF28_1786 IPR002082 Aspartate carbamoyltransferase BF28_1786 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily BF28_1787 IPR011059 Metal-dependent hydrolase, composite domain superfamily BF28_1787 IPR002195 Dihydroorotase, conserved site BF28_1787 IPR032466 Metal-dependent hydrolase BF28_1787 IPR006680 Amidohydrolase-related BF28_1787 IPR004722 Dihydroorotase BF28_1788 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain BF28_1788 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily BF28_1788 IPR035686 Carbamoyl-phosphate synthase small subunit, GATase1 domain BF28_1788 IPR029062 Class I glutamine amidotransferase-like BF28_1788 IPR006274 Carbamoyl-phosphate synthase, small subunit BF28_1788 IPR017926 Glutamine amidotransferase BF28_1789 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain BF28_1789 IPR006275 Carbamoyl-phosphate synthase, large subunit BF28_1789 IPR011607 Methylglyoxal synthase-like domain BF28_1789 IPR016185 Pre-ATP-grasp domain superfamily BF28_1789 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain BF28_1789 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily BF28_1789 IPR036914 Methylglyoxal synthase-like domain superfamily BF28_1789 IPR011761 ATP-grasp fold BF28_1789 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain BF28_1789 IPR033937 Carbamoyl-phosphate synthase large chain, methylglyoxal synthase-like domain BF28_179 IPR026988 YaaC-like protein BF28_1790 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain BF28_1790 IPR037117 Dihydroorotate dehydrogenase, electron transfer subunit, Fe-S binding domain superfamily BF28_1790 IPR017938 Riboflavin synthase-like beta-barrel BF28_1790 IPR001433 Oxidoreductase FAD/NAD(P)-binding BF28_1790 IPR012165 Cytochrome-c3 hydrogenase, gamma subunit BF28_1790 IPR000951 Phthalate dioxygenase reductase BF28_1790 IPR023455 Dihydroorotate dehydrogenase electron transfer subunit BF28_1790 IPR017927 FAD-binding domain, ferredoxin reductase-type BF28_1790 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain BF28_1791 IPR033888 Dihydroorotate dehydrogenase, class 1B BF28_1791 IPR001295 Dihydroorotate dehydrogenase, conserved site BF28_1791 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 BF28_1791 IPR024920 Dihydroorotate dehydrogenase, class 1 BF28_1791 IPR005720 Dihydroorotate dehydrogenase domain BF28_1791 IPR013785 Aldolase-type TIM barrel BF28_1792 IPR011060 Ribulose-phosphate binding barrel BF28_1792 IPR001754 Orotidine 5'-phosphate decarboxylase domain BF28_1792 IPR013785 Aldolase-type TIM barrel BF28_1792 IPR014732 Orotidine 5'-phosphate decarboxylase BF28_1792 IPR018089 Orotidine 5'-phosphate decarboxylase, active site BF28_1793 IPR004467 Orotate phosphoribosyl transferase domain BF28_1793 IPR000836 Phosphoribosyltransferase domain BF28_1793 IPR029057 Phosphoribosyltransferase-like BF28_1793 IPR023031 Orotate phosphoribosyltransferase BF28_1799 IPR036005 Creatinase/aminopeptidase-like BF28_1799 IPR000587 Creatinase, N-terminal BF28_1799 IPR000994 Peptidase M24 BF28_1799 IPR001714 Peptidase M24, methionine aminopeptidase BF28_1799 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site BF28_1799 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal BF28_18 IPR002509 NodB homology domain BF28_18 IPR014132 Sporulation polysaccharide deacetylase, PdaB BF28_18 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel BF28_1801 IPR001757 P-type ATPase BF28_1801 IPR036412 HAD-like superfamily BF28_1801 IPR023214 HAD superfamily BF28_1801 IPR005782 P-type ATPase, subfamily IIA, SERCA-type BF28_1801 IPR023299 P-type ATPase, cytoplasmic domain N BF28_1801 IPR008250 P-type ATPase, A domain superfamily BF28_1801 IPR018303 P-type ATPase, phosphorylation site BF28_1801 IPR006068 Cation-transporting P-type ATPase, C-terminal BF28_1801 IPR004014 Cation-transporting P-type ATPase, N-terminal BF28_1801 IPR023298 P-type ATPase, transmembrane domain superfamily BF28_1802 IPR013527 YicC-like, N-terminal BF28_1802 IPR013551 Domain of unknown function DUF1732 BF28_1802 IPR005229 Conserved hypothetical protein CHP00255 BF28_1803 IPR007169 Extracellular matrix regulatory protein A BF28_1804 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_1804 IPR020590 Guanylate kinase, conserved site BF28_1804 IPR008145 Guanylate kinase/L-type calcium channel beta subunit BF28_1804 IPR008144 Guanylate kinase-like domain BF28_1804 IPR017665 Guanylate kinase BF28_1805 IPR003716 DNA-directed RNA polymerase, omega subunit BF28_1805 IPR036161 RPB6/omega subunit-like superfamily BF28_1805 IPR006110 RNA polymerase, subunit omega/K/RPB6 BF28_1805 IPR012293 RNA polymerase subunit, RPB6/omega BF28_1806 IPR003382 Flavoprotein BF28_1806 IPR035929 CoaB-like superfamily BF28_1806 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC BF28_1806 IPR036551 Flavin prenyltransferase-like BF28_1806 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal BF28_1807 IPR006935 Helicase/UvrB, N-terminal BF28_1807 IPR005259 Primosomal protein N' BF28_1807 IPR014001 Helicase superfamily 1/2, ATP-binding domain BF28_1807 IPR041236 Primosomal protein N, C-terminal domain BF28_1807 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_1807 IPR040498 PriA DNA helicase, Cys-rich region (CRR) domain BF28_1807 IPR041222 Primosomal protein N', 3' DNA-binding domain BF28_1807 IPR042115 Primosomal protein N', 3' DNA-binding domain superfamily BF28_1807 IPR001650 Helicase, C-terminal BF28_1808 IPR023635 Peptide deformylase BF28_1808 IPR036821 Peptide deformylase superfamily BF28_1809 IPR011034 Formyl transferase-like, C-terminal domain superfamily BF28_1809 IPR005793 Formyl transferase, C-terminal BF28_1809 IPR037022 Formyl transferase, C-terminal domain superfamily BF28_1809 IPR002376 Formyl transferase, N-terminal BF28_1809 IPR036477 Formyl transferase, N-terminal domain superfamily BF28_1809 IPR001555 Phosphoribosylglycinamide formyltransferase, active site BF28_1809 IPR041711 Methionyl-tRNA formyltransferase, N-terminal domain BF28_1809 IPR005794 Methionyl-tRNA formyltransferase BF28_1810 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site BF28_1810 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type BF28_1810 IPR035926 NusB-like superfamily BF28_1810 IPR006027 NusB/RsmB/TIM44 BF28_1810 IPR023267 RNA (C5-cytosine) methyltransferase BF28_1810 IPR004573 rRNA small subunit methyltransferase B BF28_1810 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BF28_1811 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr BF28_1811 IPR027492 Dual-specificity RNA methyltransferase RlmN BF28_1811 IPR040072 Methyltransferase (Class A) BF28_1811 IPR013785 Aldolase-type TIM barrel BF28_1811 IPR007197 Radical SAM BF28_1812 IPR001932 PPM-type phosphatase domain BF28_1812 IPR036457 PPM-type phosphatase domain superfamily BF28_1812 IPR015655 Protein phosphatase 2C family BF28_1813 IPR017441 Protein kinase, ATP binding site BF28_1813 IPR008271 Serine/threonine-protein kinase, active site BF28_1813 IPR000719 Protein kinase domain BF28_1813 IPR005543 PASTA domain BF28_1813 IPR011009 Protein kinase-like domain superfamily BF28_1814 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_1814 IPR031944 Ribosome biogenesis GTPase RsgA, N-terminal BF28_1814 IPR010914 RsgA GTPase domain BF28_1814 IPR004881 Ribosome biogenesis GTPase RsgA BF28_1814 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain BF28_1814 IPR012340 Nucleic acid-binding, OB-fold BF28_1815 IPR000056 Ribulose-phosphate 3-epimerase-like BF28_1815 IPR013785 Aldolase-type TIM barrel BF28_1815 IPR026019 Ribulose-phosphate 3-epimerase BF28_1815 IPR011060 Ribulose-phosphate binding barrel BF28_1816 IPR006282 Thiamin pyrophosphokinase BF28_1816 IPR007373 Thiamin pyrophosphokinase, thiamin-binding domain BF28_1816 IPR007371 Thiamin pyrophosphokinase, catalytic domain BF28_1816 IPR036371 Thiamin pyrophosphokinase, thiamin-binding domain superfamily BF28_1816 IPR036759 Thiamin pyrophosphokinase, catalytic domain superfamily BF28_1817 IPR037147 Ribosomal protein L28/L24 superfamily BF28_1817 IPR001383 Ribosomal protein L28 BF28_1817 IPR034704 L28p-like BF28_1817 IPR026569 Ribosomal protein L28/L24 BF28_1818 IPR005531 Alkaline shock protein Asp23 BF28_1819 IPR033470 Uncharacterised protein, DhaK domain BF28_1819 IPR036117 DhaL domain superfamily BF28_1819 IPR019986 DAK2 domain-containing protein YloV BF28_1819 IPR004007 DhaL domain BF28_1820 IPR012340 Nucleic acid-binding, OB-fold BF28_1820 IPR011545 DEAD/DEAH box helicase domain BF28_1820 IPR001650 Helicase, C-terminal BF28_1820 IPR004609 ATP-dependent DNA helicase RecG BF28_1820 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_1820 IPR033454 RecG, wedge domain BF28_1820 IPR014001 Helicase superfamily 1/2, ATP-binding domain BF28_1821 IPR017275 Transcription factor FapR BF28_1821 IPR006683 Thioesterase domain BF28_1821 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_1821 IPR036390 Winged helix DNA-binding domain superfamily BF28_1821 IPR029069 HotDog domain superfamily BF28_1822 IPR003664 Fatty acid synthesis PlsX protein BF28_1822 IPR012281 Phospholipid biosynthesis protein, PlsX-like BF28_1823 IPR024925 Malonyl CoA-acyl carrier protein transacylase BF28_1823 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type BF28_1823 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase BF28_1823 IPR014043 Acyl transferase BF28_1823 IPR001227 Acyl transferase domain superfamily BF28_1823 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding BF28_1824 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase BF28_1824 IPR036291 NAD(P)-binding domain superfamily BF28_1824 IPR002347 Short-chain dehydrogenase/reductase SDR BF28_1825 IPR036736 ACP-like superfamily BF28_1825 IPR006162 Phosphopantetheine attachment site BF28_1825 IPR009081 Phosphopantetheine binding ACP domain BF28_1825 IPR003231 Acyl carrier protein (ACP) BF28_1826 IPR036389 Ribonuclease III, endonuclease domain superfamily BF28_1826 IPR000999 Ribonuclease III domain BF28_1826 IPR011907 Ribonuclease III BF28_1826 IPR014720 Double-stranded RNA-binding domain BF28_1827 IPR010935 SMCs flexible hinge BF28_1827 IPR024704 Structural maintenance of chromosomes protein BF28_1827 IPR036277 SMCs flexible hinge superfamily BF28_1827 IPR003395 RecF/RecN/SMC, N-terminal BF28_1827 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_1827 IPR011890 Structural maintenance of chromosomes protein, prokaryotic BF28_1828 IPR036225 SRP/SRP receptor, N-terminal BF28_1828 IPR004390 Signal-recognition particle receptor FtsY BF28_1828 IPR013822 Signal recognition particle SRP54, helical bundle BF28_1828 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_1828 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily BF28_1828 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain BF28_1828 IPR003593 AAA+ ATPase domain BF28_1829 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_1829 IPR007394 Putative helix-turn-helix protein, YlxM/p13-like BF28_1829 IPR013324 RNA polymerase sigma factor, region 3/4-like BF28_1830 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily BF28_1830 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily BF28_1830 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain BF28_1830 IPR022941 Signal recognition particle, SRP54 subunit BF28_1830 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_1830 IPR004780 Signal recognition particle protein BF28_1830 IPR004125 Signal recognition particle, SRP54 subunit, M-domain BF28_1830 IPR003593 AAA+ ATPase domain BF28_1830 IPR013822 Signal recognition particle SRP54, helical bundle BF28_1831 IPR000307 Ribosomal protein S16 BF28_1831 IPR023803 Ribosomal protein S16 domain superfamily BF28_1831 IPR020592 Ribosomal protein S16, conserved site BF28_1832 IPR015946 K homology domain-like, alpha/beta BF28_1832 IPR009019 K homology domain superfamily, prokaryotic type BF28_1832 IPR020627 Uncharacterised protein family UPF0109 BF28_1833 IPR011961 16S rRNA processing protein RimM BF28_1833 IPR011033 PRC-barrel-like superfamily BF28_1833 IPR002676 RimM, N-terminal BF28_1833 IPR036976 RimM, N-terminal domain superfamily BF28_1833 IPR009000 Translation protein, beta-barrel domain superfamily BF28_1833 IPR027275 PRC-barrel domain BF28_1834 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria BF28_1834 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain BF28_1834 IPR029028 Alpha/beta knot methyltransferases BF28_1834 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal BF28_1834 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal BF28_1835 IPR018257 Ribosomal protein L19, conserved site BF28_1835 IPR001857 Ribosomal protein L19 BF28_1835 IPR008991 Translation protein SH3-like domain superfamily BF28_1835 IPR038657 Ribosomal protein L19 superfamily BF28_1836 IPR019757 Peptidase S26A, signal peptidase I, lysine active site BF28_1836 IPR019756 Peptidase S26A, signal peptidase I, serine active site BF28_1836 IPR019758 Peptidase S26A, signal peptidase I, conserved site BF28_1836 IPR019533 Peptidase S26 BF28_1836 IPR000223 Peptidase S26A, signal peptidase I BF28_1836 IPR036286 LexA/Signal peptidase-like superfamily BF28_1837 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_1837 IPR006073 GTP binding domain BF28_1837 IPR016478 GTPase, MTG1 BF28_1837 IPR019991 GTP-binding protein, ribosome biogenesis BF28_1837 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain BF28_1837 IPR023179 GTP-binding protein, orthogonal bundle domain superfamily BF28_1838 IPR036397 Ribonuclease H superfamily BF28_1838 IPR012337 Ribonuclease H-like superfamily BF28_1838 IPR022898 Ribonuclease HII BF28_1838 IPR024567 Ribonuclease HII/HIII domain BF28_1838 IPR001352 Ribonuclease HII/HIII BF28_1839 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type BF28_1839 IPR016102 Succinyl-CoA synthetase-like BF28_1839 IPR011761 ATP-grasp fold BF28_1839 IPR005809 Succinate--CoA synthetase, beta subunit BF28_1839 IPR005811 ATP-citrate lyase/succinyl-CoA ligase BF28_1839 IPR013815 ATP-grasp fold, subdomain 1 BF28_1840 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site BF28_1840 IPR005810 Succinyl-CoA ligase, alpha subunit BF28_1840 IPR005811 ATP-citrate lyase/succinyl-CoA ligase BF28_1840 IPR036291 NAD(P)-binding domain superfamily BF28_1840 IPR016102 Succinyl-CoA synthetase-like BF28_1840 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site BF28_1840 IPR003781 CoA-binding BF28_1841 IPR003488 DNA recombination-mediator protein A BF28_1842 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 BF28_1842 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 BF28_1842 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 BF28_1842 IPR013497 DNA topoisomerase, type IA, central BF28_1842 IPR003601 DNA topoisomerase, type IA, domain 2 BF28_1842 IPR023406 DNA topoisomerase, type IA, active site BF28_1842 IPR003602 DNA topoisomerase, type IA, DNA-binding domain BF28_1842 IPR013498 DNA topoisomerase, type IA, zn finger BF28_1842 IPR005733 DNA topoisomerase I, bacterial-type BF28_1842 IPR000380 DNA topoisomerase, type IA BF28_1842 IPR028612 DNA topoisomerase I, type IA BF28_1842 IPR006171 TOPRIM domain BF28_1842 IPR034149 DNA topoisomerase 1, TOPRIM domain BF28_1842 IPR023405 DNA topoisomerase, type IA, core domain BF28_1843 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related BF28_1843 IPR036188 FAD/NAD(P)-binding domain superfamily BF28_1843 IPR004417 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO BF28_1843 IPR020595 MnmG-related, conserved site BF28_1844 IPR023009 Tyrosine recombinase XerC/XerD BF28_1844 IPR004107 Integrase, SAM-like, N-terminal BF28_1844 IPR010998 Integrase/recombinase, N-terminal BF28_1844 IPR002104 Integrase, catalytic domain BF28_1844 IPR013762 Integrase-like, catalytic domain superfamily BF28_1844 IPR011931 Tyrosine recombinase XerC BF28_1844 IPR011010 DNA breaking-rejoining enzyme, catalytic core BF28_1845 IPR022281 ATP-dependent protease, HslV subunit BF28_1845 IPR029055 Nucleophile aminohydrolases, N-terminal BF28_1845 IPR001353 Proteasome, subunit alpha/beta BF28_1845 IPR023333 Proteasome B-type subunit BF28_1846 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_1846 IPR004491 Heat shock protein HslU BF28_1846 IPR019489 Clp ATPase, C-terminal BF28_1846 IPR003593 AAA+ ATPase domain BF28_1846 IPR003959 ATPase, AAA-type, core BF28_1847 IPR036390 Winged helix DNA-binding domain superfamily BF28_1847 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_1847 IPR013198 GTP-sensing helix-turn-helix, CodY, C-terminal BF28_1847 IPR010312 GTP-sensing transcriptional pleiotropic repressor CodY, N-terminal BF28_1847 IPR029016 GAF-like domain superfamily BF28_1847 IPR014154 GTP-sensing transcriptional pleiotropic repressor CodY BF28_1848 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily BF28_1848 IPR018130 Ribosomal protein S2, conserved site BF28_1848 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid BF28_1848 IPR001865 Ribosomal protein S2 BF28_1849 IPR001816 Translation elongation factor EFTs/EF1B BF28_1849 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation BF28_1849 IPR009060 UBA-like superfamily BF28_1849 IPR018101 Translation elongation factor Ts, conserved site BF28_1849 IPR036402 Elongation factor Ts, dimerisation domain superfamily BF28_1850 IPR011817 Uridylate kinase BF28_1850 IPR001048 Aspartate/glutamate/uridylate kinase BF28_1850 IPR015963 Uridylate kinase, bacteria BF28_1850 IPR036393 Acetylglutamate kinase-like superfamily BF28_1851 IPR023584 Ribosome recycling factor domain BF28_1851 IPR002661 Ribosome recycling factor BF28_1851 IPR036191 RRF superfamily BF28_1852 IPR036424 Decaprenyl diphosphate synthase-like superfamily BF28_1852 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site BF28_1852 IPR001441 Decaprenyl diphosphate synthase-like BF28_1853 IPR000374 Phosphatidate cytidylyltransferase BF28_1854 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal BF28_1854 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal BF28_1854 IPR026877 DXP reductoisomerase C-terminal domain BF28_1854 IPR036169 DXP reductoisomerase, C-terminal domain superfamily BF28_1854 IPR036291 NAD(P)-binding domain superfamily BF28_1854 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase BF28_1855 IPR001478 PDZ domain BF28_1855 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase BF28_1855 IPR008915 Peptidase M50 BF28_1855 IPR036034 PDZ superfamily BF28_1855 IPR041489 PDZ domain 6 BF28_1856 IPR006195 Aminoacyl-tRNA synthetase, class II BF28_1856 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) BF28_1856 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain BF28_1856 IPR033730 Prokaryote proline-tRNA ligase core domain BF28_1856 IPR002316 Proline-tRNA ligase, class IIa BF28_1856 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type BF28_1856 IPR004154 Anticodon-binding BF28_1856 IPR036621 Anticodon-binding domain superfamily BF28_1856 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily BF28_1856 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 BF28_1857 IPR012337 Ribonuclease H-like superfamily BF28_1857 IPR036397 Ribonuclease H superfamily BF28_1857 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain BF28_1857 IPR040982 DNA polymerase III alpha subunit finger domain BF28_1857 IPR013520 Exonuclease, RNase T/DNA polymerase III BF28_1857 IPR029460 DNA polymerase, helix-hairpin-helix motif BF28_1857 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain BF28_1857 IPR012340 Nucleic acid-binding, OB-fold BF28_1857 IPR006308 DNA polymerase III, alpha subunit, Gram-positive type BF28_1857 IPR004013 PHP domain BF28_1857 IPR003141 Polymerase/histidinol phosphatase, N-terminal BF28_1857 IPR024754 DNA polymerase III polC-like, N-terminal domain II BF28_1857 IPR028112 DNA polymerase III polC-type, N-terminal domain I BF28_1858 IPR035956 RimP, N-terminal domain superfamily BF28_1858 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily BF28_1858 IPR028998 Ribosome maturation factor RimP, C-terminal BF28_1858 IPR003728 Ribosome maturation factor RimP BF28_1858 IPR028989 Ribosome maturation factor RimP, N-terminal BF28_1859 IPR022967 RNA-binding domain, S1 BF28_1859 IPR003029 S1 domain BF28_1859 IPR009019 K homology domain superfamily, prokaryotic type BF28_1859 IPR025249 KH domain, NusA-like BF28_1859 IPR012340 Nucleic acid-binding, OB-fold BF28_1859 IPR036555 NusA, N-terminal domain superfamily BF28_1859 IPR015946 K homology domain-like, alpha/beta BF28_1859 IPR013735 Transcription factor NusA, N-terminal BF28_1859 IPR010213 Transcription termination factor NusA BF28_1859 IPR004087 K Homology domain BF28_1859 IPR030842 Transcription termination/antitermination protein NusA, bacterial BF28_186 IPR013760 DNA topoisomerase, type IIA-like domain superfamily BF28_186 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal BF28_186 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat BF28_186 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta BF28_186 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily BF28_186 IPR005743 DNA gyrase, subunit A BF28_186 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal BF28_1860 IPR037465 Uncharacterized protein YlxR BF28_1860 IPR007393 Domain of unknown function DUF448 BF28_1860 IPR035931 YlxR-like superfamily BF28_1861 IPR004038 Ribosomal protein L7Ae/L30e/S12e/Gadd45 BF28_1861 IPR004037 Ribosomal protein L7Ae conserved site BF28_1861 IPR029064 50S ribosomal protein L30e-like BF28_1861 IPR039109 Ribosomal protein L30/YlxQ BF28_1861 IPR039107 Ribosomal protein YlxQ BF28_1862 IPR009000 Translation protein, beta-barrel domain superfamily BF28_1862 IPR036925 Translation initiation factor IF-2, domain 3 superfamily BF28_1862 IPR023115 Translation initiation factor IF- 2, domain 3 BF28_1862 IPR006847 Translation initiation factor IF-2, N-terminal BF28_1862 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_1862 IPR015760 Translation initiation factor IF- 2 BF28_1862 IPR000178 Translation initiation factor aIF-2, bacterial-like BF28_1862 IPR000795 Transcription factor, GTP-binding domain BF28_1862 IPR005225 Small GTP-binding protein domain BF28_1863 IPR007546 Protein of unknown function DUF503 BF28_1863 IPR036746 TT1725-like superfamily BF28_1864 IPR020053 Ribosome-binding factor A, conserved site BF28_1864 IPR000238 Ribosome-binding factor A BF28_1864 IPR023799 Ribosome-binding factor A domain superfamily BF28_1864 IPR015946 K homology domain-like, alpha/beta BF28_1865 IPR020103 Pseudouridine synthase, catalytic domain superfamily BF28_1865 IPR002501 Pseudouridine synthase II, N-terminal BF28_1865 IPR014780 tRNA pseudouridine synthase II, TruB BF28_1865 IPR032819 tRNA pseudouridylate synthase B, C-terminal BF28_1866 IPR004821 Cytidyltransferase-like domain BF28_1866 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BF28_1866 IPR002606 Riboflavin kinase, bacterial BF28_1866 IPR015864 FAD synthetase BF28_1866 IPR023468 Riboflavin kinase BF28_1866 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic BF28_1866 IPR023465 Riboflavin kinase domain superfamily BF28_1867 IPR009068 S15/NS1, RNA-binding BF28_1867 IPR005290 Ribosomal protein S15, bacterial-type BF28_1867 IPR000589 Ribosomal protein S15 BF28_1868 IPR012162 Polyribonucleotide nucleotidyltransferase BF28_1868 IPR012340 Nucleic acid-binding, OB-fold BF28_1868 IPR020568 Ribosomal protein S5 domain 2-type fold BF28_1868 IPR036612 K Homology domain, type 1 superfamily BF28_1868 IPR004087 K Homology domain BF28_1868 IPR022967 RNA-binding domain, S1 BF28_1868 IPR027408 PNPase/RNase PH domain superfamily BF28_1868 IPR001247 Exoribonuclease, phosphorolytic domain 1 BF28_1868 IPR015847 Exoribonuclease, phosphorolytic domain 2 BF28_1868 IPR036345 Exoribonuclease, PH domain 2 superfamily BF28_1868 IPR003029 S1 domain BF28_1868 IPR004088 K Homology domain, type 1 BF28_1868 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain BF28_1869 IPR010916 TonB box, conserved site BF28_1869 IPR002509 NodB homology domain BF28_1869 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel BF28_1869 IPR014228 Sporulation protein, polysaccharide deacetylase, YlxY BF28_187 IPR034160 DNA gyrase subunit B, TOPRIM domain BF28_187 IPR006171 TOPRIM domain BF28_187 IPR002288 DNA gyrase B subunit, C-terminal BF28_187 IPR011557 DNA gyrase, subunit B BF28_187 IPR003594 Histidine kinase/HSP90-like ATPase BF28_187 IPR020568 Ribosomal protein S5 domain 2-type fold BF28_187 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BF28_187 IPR001241 DNA topoisomerase, type IIA BF28_187 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BF28_187 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal BF28_187 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 BF28_187 IPR018522 DNA topoisomerase, type IIA, conserved site BF28_187 IPR013760 DNA topoisomerase, type IIA-like domain superfamily BF28_1870 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like BF28_1870 IPR007863 Peptidase M16, C-terminal BF28_1870 IPR001431 Peptidase M16, zinc-binding site BF28_1870 IPR011765 Peptidase M16, N-terminal BF28_1871 IPR014238 Sporulation protein YlmC/YmxH BF28_1871 IPR011033 PRC-barrel-like superfamily BF28_1871 IPR027275 PRC-barrel domain BF28_1872 IPR014215 Dipicolinic acid synthetase subunit A BF28_1872 IPR031629 Dipicolinate synthase subunit A, N-terminal BF28_1872 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain BF28_1872 IPR036291 NAD(P)-binding domain superfamily BF28_1873 IPR036551 Flavin prenyltransferase-like BF28_1873 IPR003382 Flavoprotein BF28_1873 IPR014214 Dipicolinic acid synthetase, subunit B BF28_1874 IPR036291 NAD(P)-binding domain superfamily BF28_1874 IPR000534 Semialdehyde dehydrogenase, NAD-binding BF28_1874 IPR012280 Semialdehyde dehydrogenase, dimerisation domain BF28_1874 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type BF28_1874 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site BF28_1874 IPR012080 Aspartate-semialdehyde dehydrogenase BF28_1875 IPR018042 Aspartate kinase, conserved site BF28_1875 IPR001341 Aspartate kinase BF28_1875 IPR005260 Aspartate kinase, monofunctional class BF28_1875 IPR001048 Aspartate/glutamate/uridylate kinase BF28_1875 IPR002912 ACT domain BF28_1875 IPR027795 CASTOR, ACT domain BF28_1875 IPR036393 Acetylglutamate kinase-like superfamily BF28_1876 IPR020625 Schiff base-forming aldolase, active site BF28_1876 IPR002220 DapA-like BF28_1876 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA BF28_1876 IPR013785 Aldolase-type TIM barrel BF28_1876 IPR020624 Schiff base-forming aldolase, conserved site BF28_1877 IPR041636 Ribonuclease J, C-terminal BF28_1877 IPR001279 Metallo-beta-lactamase BF28_1877 IPR004613 Ribonuclease J BF28_1877 IPR042173 Ribonuclease J, domain 2 BF28_1877 IPR030854 Ribonuclease J, bacteria BF28_1877 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain BF28_1877 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BF28_1878 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA BF28_1878 IPR029045 ClpP/crotonase-like domain superfamily BF28_1879 IPR025619 YlzJ-like protein BF28_188 IPR001238 DNA-binding, RecF BF28_188 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_188 IPR042174 DNA-binding RecF, domain 2 BF28_188 IPR003395 RecF/RecN/SMC, N-terminal BF28_188 IPR018078 DNA-binding, RecF, conserved site BF28_1880 IPR041027 FtsK alpha domain BF28_1880 IPR002543 FtsK domain BF28_1880 IPR036390 Winged helix DNA-binding domain superfamily BF28_1880 IPR003593 AAA+ ATPase domain BF28_1880 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_1880 IPR018541 FtsK gamma domain BF28_1880 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_1881 IPR000524 Transcription regulator HTH, GntR BF28_1881 IPR036390 Winged helix DNA-binding domain superfamily BF28_1881 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily BF28_1881 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_1881 IPR011663 UbiC transcription regulator-associated BF28_1886 IPR007863 Peptidase M16, C-terminal BF28_1886 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like BF28_1887 IPR007863 Peptidase M16, C-terminal BF28_1887 IPR011765 Peptidase M16, N-terminal BF28_1887 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like BF28_1888 IPR002347 Short-chain dehydrogenase/reductase SDR BF28_1888 IPR036291 NAD(P)-binding domain superfamily BF28_1889 IPR021637 Protein of unknown function DUF3243 BF28_1889 IPR024702 Uncharacterised conserved protein YmfJ BF28_1889 IPR038292 YmfJ/YflH superfamily BF28_189 IPR036986 RNA-binding S4 domain superfamily BF28_189 IPR002942 RNA-binding S4 domain BF28_189 IPR014330 RNA-binding S4-related,YaaA BF28_1890 IPR016784 Uncharacterised protein UCP021288 with ACT domain BF28_1890 IPR024514 Domain of unknown function DUF3388 BF28_1890 IPR002912 ACT domain BF28_1891 IPR025194 Domain of unknown function DUF4115 BF28_1891 IPR010982 Lambda repressor-like, DNA-binding domain superfamily BF28_1892 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase BF28_1892 IPR000462 CDP-alcohol phosphatidyltransferase BF28_1893 IPR036653 CinA-like, C-terminal BF28_1893 IPR008136 CinA, C-terminal BF28_1893 IPR041424 CinA, KH domain BF28_1893 IPR008135 Competence-induced protein CinA BF28_1893 IPR001453 MoaB/Mog domain BF28_1893 IPR036425 MoaB/Mog-like domain superfamily BF28_1894 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_1894 IPR020587 DNA recombination and repair protein RecA, monomer-monomer interface BF28_1894 IPR020584 DNA recombination/repair protein RecA, conserved site BF28_1894 IPR023400 DNA recombination and repair protein RecA, C-terminal BF28_1894 IPR003593 AAA+ ATPase domain BF28_1894 IPR013765 DNA recombination and repair protein RecA BF28_1894 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain BF28_1895 IPR020587 DNA recombination and repair protein RecA, monomer-monomer interface BF28_1895 IPR003593 AAA+ ATPase domain BF28_1895 IPR020584 DNA recombination/repair protein RecA, conserved site BF28_1895 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_1895 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain BF28_1895 IPR023400 DNA recombination and repair protein RecA, C-terminal BF28_1895 IPR013765 DNA recombination and repair protein RecA BF28_1896 IPR003607 HD/PDEase domain BF28_1896 IPR006674 HD domain BF28_1896 IPR006675 HDIG domain BF28_1896 IPR036612 K Homology domain, type 1 superfamily BF28_1896 IPR022711 Ribonuclease Y, N-terminal BF28_1896 IPR004087 K Homology domain BF28_1896 IPR004088 K Homology domain, type 1 BF28_1896 IPR017705 Ribonuclease Y BF28_1897 IPR005235 Metallophosphoesterase, YmdB-like BF28_1897 IPR029052 Metallo-dependent phosphatase-like BF28_1898 IPR036882 Alba-like domain superfamily BF28_1898 IPR007347 Sporulation stage V, protein S BF28_1899 IPR032466 Metal-dependent hydrolase BF28_1899 IPR008257 Peptidase M19 BF28_19 IPR024164 KinB-signalling pathway activation protein BF28_190 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal BF28_190 IPR022637 DNA polymerase III, beta sliding clamp, central BF28_190 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal BF28_190 IPR001001 DNA polymerase III, beta sliding clamp BF28_1900 IPR022367 2-oxoacid:acceptor oxidoreductase, alpha subunit BF28_1900 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II BF28_1900 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal BF28_1900 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain BF28_1900 IPR029061 Thiamin diphosphate-binding fold BF28_1900 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain BF28_1900 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II BF28_1901 IPR029061 Thiamin diphosphate-binding fold BF28_1901 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding BF28_1902 IPR007197 Radical SAM BF28_1902 IPR013848 Methylthiotransferase, N-terminal BF28_1902 IPR020612 Methylthiotransferase, conserved site BF28_1902 IPR005839 Methylthiotransferase BF28_1902 IPR023404 Radical SAM, alpha/beta horseshoe BF28_1902 IPR006638 Elp3/MiaB/NifB BF28_1902 IPR038135 Methylthiotransferase, N-terminal domain superfamily BF28_1902 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB BF28_1902 IPR002792 TRAM domain BF28_1903 IPR016783 Biofilm formation YmcA BF28_1903 IPR023378 YheA/YmcA-like domain superfamily BF28_1903 IPR010368 Control of competence regulator ComK, YlbF/YmcA BF28_1904 IPR018901 Spore coat protein CotE BF28_1905 IPR005748 DNA mismatch repair protein MutS BF28_1905 IPR007696 DNA mismatch repair protein MutS, core BF28_1905 IPR007860 DNA mismatch repair protein MutS, connector domain BF28_1905 IPR007861 DNA mismatch repair protein MutS, clamp BF28_1905 IPR036678 MutS, connector domain superfamily BF28_1905 IPR017261 DNA mismatch repair protein MutS/MSH BF28_1905 IPR007695 DNA mismatch repair protein MutS-like, N-terminal BF28_1905 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_1905 IPR036187 DNA mismatch repair protein MutS, core domain superfamily BF28_1905 IPR016151 DNA mismatch repair protein MutS, N-terminal BF28_1905 IPR000432 DNA mismatch repair protein MutS, C-terminal BF28_1906 IPR014790 MutL, C-terminal, dimerisation BF28_1906 IPR042120 MutL, C-terminal domain, dimerisation subdomain BF28_1906 IPR014762 DNA mismatch repair, conserved site BF28_1906 IPR042121 MutL, C-terminal domain, regulatory subdomain BF28_1906 IPR038973 DNA mismatch repair protein MutL/Mlh/Pms BF28_1906 IPR037198 MutL, C-terminal domain superfamily BF28_1906 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BF28_1906 IPR013507 DNA mismatch repair protein, S5 domain 2-like BF28_1906 IPR002099 DNA mismatch repair protein family, N-terminal BF28_1906 IPR020568 Ribosomal protein S5 domain 2-type fold BF28_1906 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BF28_1906 IPR020667 DNA mismatch repair protein, MutL BF28_1907 IPR036390 Winged helix DNA-binding domain superfamily BF28_1907 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_1907 IPR001845 HTH ArsR-type DNA-binding domain BF28_1907 IPR011991 ArsR-like helix-turn-helix domain BF28_1908 IPR012697 Carboxyvinyl-carboxyphosphonate phosphorylmutase BF28_1908 IPR039556 ICL/PEPM domain BF28_1908 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site BF28_1908 IPR040442 Pyruvate kinase-like domain superfamily BF28_1908 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily BF28_191 IPR001957 Chromosomal replication control, initiator DnaA BF28_191 IPR003593 AAA+ ATPase domain BF28_191 IPR024633 DnaA N-terminal domain BF28_191 IPR020591 Chromosomal replication control, initiator DnaA-like BF28_191 IPR018312 Chromosomal replication control, initiator DnaA, conserved site BF28_191 IPR010921 Trp repressor/replication initiator BF28_191 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_191 IPR038454 DnaA, N-terminal domain superfamily BF28_191 IPR013317 Chromosomal replication initiator protein DnaA BF28_191 IPR013159 Chromosomal replication initiator, DnaA C-terminal BF28_1910 IPR005793 Formyl transferase, C-terminal BF28_1910 IPR001555 Phosphoribosylglycinamide formyltransferase, active site BF28_1910 IPR011034 Formyl transferase-like, C-terminal domain superfamily BF28_1910 IPR005794 Methionyl-tRNA formyltransferase BF28_1910 IPR037022 Formyl transferase, C-terminal domain superfamily BF28_1910 IPR036477 Formyl transferase, N-terminal domain superfamily BF28_1910 IPR002376 Formyl transferase, N-terminal BF28_1910 IPR041711 Methionyl-tRNA formyltransferase, N-terminal domain BF28_1913 IPR017894 HTH domain, IS21 transposase-type BF28_1913 IPR006120 Resolvase, HTH domain BF28_1913 IPR036397 Ribonuclease H superfamily BF28_1913 IPR001584 Integrase, catalytic core BF28_1913 IPR012337 Ribonuclease H-like superfamily BF28_1916 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_1916 IPR022812 Dynamin superfamily BF28_1916 IPR027094 Mitofusin family BF28_1916 IPR030381 Dynamin-type guanine nucleotide-binding (G) domain BF28_1917 IPR000917 Sulfatase, N-terminal BF28_1917 IPR012160 Lipoteichoic acid synthase-like BF28_1917 IPR017850 Alkaline-phosphatase-like, core domain superfamily BF28_1918 IPR036188 FAD/NAD(P)-binding domain superfamily BF28_1918 IPR015899 UDP-galactopyranose mutase, C-terminal BF28_1918 IPR004379 UDP-galactopyranose mutase BF28_1919 IPR042047 Cell wall hydrolase SleB, domain 1 BF28_1919 IPR011105 Cell wall hydrolase, SleB BF28_192 IPR000271 Ribosomal protein L34 BF28_192 IPR020939 Ribosomal protein L34, conserved site BF28_1920 IPR022398 Peptidase S8, subtilisin, His-active site BF28_1920 IPR023828 Peptidase S8, subtilisin, Ser-active site BF28_1920 IPR015500 Peptidase S8, subtilisin-related BF28_1920 IPR023827 Peptidase S8, subtilisin, Asp-active site BF28_1920 IPR034202 Subtilisin Carlsberg-like catalytic domain BF28_1920 IPR036852 Peptidase S8/S53 domain superfamily BF28_1920 IPR000209 Peptidase S8/S53 domain BF28_1921 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily BF28_1921 IPR000909 Phosphatidylinositol-specific phospholipase C, X domain BF28_1923 IPR015424 Pyridoxal phosphate-dependent transferase BF28_1923 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BF28_1923 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_1923 IPR004839 Aminotransferase, class I/classII BF28_1923 IPR000524 Transcription regulator HTH, GntR BF28_1923 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BF28_1923 IPR036390 Winged helix DNA-binding domain superfamily BF28_1924 IPR023760 Holin-like protein CidA BF28_1924 IPR005538 LrgA/CidA family BF28_1925 IPR019723 Uncharacterised protein, YfmQ BF28_1927 IPR035919 EAL domain superfamily BF28_1927 IPR000160 GGDEF domain BF28_1927 IPR001633 EAL domain BF28_1927 IPR005330 MHYT domain BF28_1927 IPR035965 PAS domain superfamily BF28_1927 IPR029787 Nucleotide cyclase BF28_1928 IPR037523 Vicinal oxygen chelate (VOC) domain BF28_1928 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BF28_1928 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain BF28_193 IPR020539 Ribonuclease P, conserved site BF28_193 IPR000100 Ribonuclease P BF28_193 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BF28_193 IPR020568 Ribosomal protein S5 domain 2-type fold BF28_1932 IPR038750 Uncharacterized protein YczE/YyaS-like BF28_1933 IPR011650 Peptidase M20, dimerisation domain BF28_1933 IPR010161 Peptidase M20B, tripeptide aminopeptidase BF28_1933 IPR002933 Peptidase M20 BF28_1933 IPR036264 Bacterial exopeptidase dimerisation domain BF28_1933 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site BF28_1934 IPR011257 DNA glycosylase BF28_1934 IPR000035 Alkylbase DNA glycosidase, conserved site BF28_1934 IPR003265 HhH-GPD domain BF28_1934 IPR012904 8-oxoguanine DNA glycosylase, N-terminal BF28_1935 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain BF28_1935 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily BF28_1935 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site BF28_1935 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_1935 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain BF28_1935 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding BF28_1936 IPR004026 Ada DNA repair, metal-binding BF28_1936 IPR035451 Ada-like domain superfamily BF28_1936 IPR009057 Homeobox-like domain superfamily BF28_1936 IPR016220 Methylphosphotriester-DNA alkyltransferase, AdaA BF28_1936 IPR018060 DNA binding HTH domain, AraC-type BF28_1936 IPR018062 HTH domain AraC-type, conserved site BF28_1937 IPR036691 Endonuclease/exonuclease/phosphatase superfamily BF28_1937 IPR005135 Endonuclease/exonuclease/phosphatase BF28_1937 IPR020848 AP endonuclease 1, conserved site BF28_1937 IPR020847 AP endonuclease 1, binding site BF28_1937 IPR004808 AP endonuclease 1 BF28_1938 IPR002491 ABC transporter periplasmic binding domain BF28_1939 IPR037294 ABC transporter, BtuC-like BF28_1939 IPR000522 ABC transporter, permease protein, BtuC-like BF28_194 IPR028055 Membrane insertase YidC/Oxa1, C-terminal BF28_194 IPR023060 Membrane insertase YidC/YidC1/YidC2, Firmicutes BF28_194 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 BF28_1940 IPR000522 ABC transporter, permease protein, BtuC-like BF28_1940 IPR037294 ABC transporter, BtuC-like BF28_1941 IPR003593 AAA+ ATPase domain BF28_1941 IPR017871 ABC transporter, conserved site BF28_1941 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_1941 IPR003439 ABC transporter-like BF28_1942 IPR029058 Alpha/Beta hydrolase fold BF28_1942 IPR000801 Putative esterase BF28_1944 IPR038390 Metal-sensitive transcriptional repressor superfamily BF28_1944 IPR003735 Metal-sensitive transcriptional repressor BF28_1945 IPR000428 Copper ion binding protein BF28_1945 IPR017969 Heavy-metal-associated, conserved site BF28_1945 IPR006121 Heavy metal-associated domain, HMA BF28_1945 IPR006122 Heavy metal-associated domain, copper ion-binding BF28_1945 IPR036163 Heavy metal-associated domain superfamily BF28_1946 IPR008250 P-type ATPase, A domain superfamily BF28_1946 IPR023214 HAD superfamily BF28_1946 IPR036412 HAD-like superfamily BF28_1946 IPR001757 P-type ATPase BF28_1946 IPR017969 Heavy-metal-associated, conserved site BF28_1946 IPR027256 P-type ATPase, subfamily IB BF28_1946 IPR023299 P-type ATPase, cytoplasmic domain N BF28_1946 IPR023298 P-type ATPase, transmembrane domain superfamily BF28_1946 IPR018303 P-type ATPase, phosphorylation site BF28_1946 IPR036163 Heavy metal-associated domain superfamily BF28_1946 IPR006122 Heavy metal-associated domain, copper ion-binding BF28_1946 IPR006121 Heavy metal-associated domain, HMA BF28_1947 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily BF28_1947 IPR000119 Histone-like DNA-binding protein BF28_1947 IPR020816 Histone-like DNA-binding protein, conserved site BF28_1948 IPR024002 Formate/nitrite transporter, conserved site BF28_1948 IPR000292 Formate/nitrite transporter BF28_1948 IPR023271 Aquaporin-like BF28_1949 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type BF28_1949 IPR029052 Metallo-dependent phosphatase-like BF28_1949 IPR006311 Twin-arginine translocation pathway, signal sequence BF28_1949 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal BF28_195 IPR032782 Jag, N-terminal BF28_195 IPR038247 Jag, N-terminal domain superfamily BF28_195 IPR004087 K Homology domain BF28_195 IPR015946 K homology domain-like, alpha/beta BF28_195 IPR001374 R3H domain BF28_195 IPR038008 Jag, KH domain BF28_195 IPR036867 R3H domain superfamily BF28_195 IPR034079 Jag, R3H domain BF28_195 IPR039247 Jag protein BF28_1950 IPR013783 Immunoglobulin-like fold BF28_1950 IPR003961 Fibronectin type III BF28_1950 IPR036116 Fibronectin type III superfamily BF28_1950 IPR011583 Chitinase II BF28_1950 IPR036573 Carbohydrate-binding module superfamily 5/12 BF28_1950 IPR003610 Carbohydrate-binding module family 5/12 BF28_1950 IPR001223 Glycoside hydrolase family 18, catalytic domain BF28_1950 IPR017853 Glycoside hydrolase superfamily BF28_1950 IPR001579 Glycoside hydrolase, chitinase active site BF28_1951 IPR004840 Amino acid permease, conserved site BF28_1951 IPR011265 GABA permease BF28_1951 IPR004841 Amino acid permease/ SLC12A domain BF28_1954 IPR007352 Protein of unknown function DUF420 BF28_1955 IPR018211 Alcohol dehydrogenase, iron-type, conserved site BF28_1955 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA BF28_1956 IPR018356 Transcription regulator, HTH DeoR-type, conserved site BF28_1956 IPR014036 DeoR C-terminal sensor domain BF28_1956 IPR037171 NagB/RpiA transferase-like BF28_1956 IPR036390 Winged helix DNA-binding domain superfamily BF28_1956 IPR001034 DeoR-type HTH domain BF28_1957 IPR017583 Tagatose/fructose phosphokinase BF28_1957 IPR029056 Ribokinase-like BF28_1957 IPR011611 Carbohydrate kinase PfkB BF28_1957 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site BF28_1957 IPR022463 Fructose 1-phosphate kinase BF28_1958 IPR013011 Phosphotransferase system, EIIB component, type 2 BF28_1958 IPR003501 Phosphotransferase system, EIIB component, type 2/3 BF28_1958 IPR016152 Phosphotransferase/anion transporter BF28_1958 IPR002178 PTS EIIA type-2 domain BF28_1958 IPR036095 PTS system IIB component-like superfamily BF28_1958 IPR013014 Phosphotransferase system, EIIC component, type 2 BF28_1958 IPR004715 Phosphotransferase system, IIA component fructose subfamily BF28_1958 IPR006327 Phosphotransferase system, fructose IIC component BF28_1958 IPR003353 Phosphotransferase system, fructose-specific IIB subunit BF28_1959 IPR036908 RlpA-like domain superfamily BF28_1959 IPR036779 LysM domain superfamily BF28_1959 IPR018392 LysM domain BF28_1959 IPR010611 3D domain BF28_196 IPR005225 Small GTP-binding protein domain BF28_196 IPR027368 tRNA modification GTPase MnmE domain 2 BF28_196 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 BF28_196 IPR031168 TrmE-type guanine nucleotide-binding domain BF28_196 IPR025867 MnmE, helical domain BF28_196 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_196 IPR004520 tRNA modification GTPase MnmE BF28_196 IPR018948 GTP-binding protein TrmE, N-terminal BF28_196 IPR006073 GTP binding domain BF28_1961 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_1961 IPR018022 IPP transferase BF28_1961 IPR039657 Dimethylallyltransferase BF28_1962 IPR010920 LSM domain superfamily BF28_1962 IPR005001 RNA-binding protein Hfq BF28_1965 IPR003593 AAA+ ATPase domain BF28_1965 IPR003959 ATPase, AAA-type, core BF28_1965 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_1965 IPR014232 Sporulation stage V, protein K BF28_1965 IPR000641 CbxX/CfxQ BF28_1965 IPR041627 CbbX, AAA lid domain BF28_1967 IPR005115 Uncharacterised domain UPF0126 BF28_1968 IPR006073 GTP binding domain BF28_1968 IPR042108 GTPase HflX, N-terminal domain superfamily BF28_1968 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_1968 IPR025121 GTPase HflX, N-terminal BF28_1968 IPR016496 GTPase HflX BF28_1968 IPR030394 HflX-type guanine nucleotide-binding (G) domain BF28_1968 IPR032305 GTP-binding protein, middle domain BF28_1969 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BF28_1969 IPR009651 Putative methionine gamma-lyase BF28_1969 IPR015424 Pyridoxal phosphate-dependent transferase BF28_197 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related BF28_197 IPR026904 GidA associated domain 3 BF28_197 IPR020595 MnmG-related, conserved site BF28_197 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG BF28_197 IPR036188 FAD/NAD(P)-binding domain superfamily BF28_1970 IPR009061 Putative DNA-binding domain superfamily BF28_1970 IPR000551 MerR-type HTH domain BF28_1971 IPR008146 Glutamine synthetase, catalytic domain BF28_1971 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain BF28_1971 IPR036651 Glutamine synthetase, N-terminal domain superfamily BF28_1971 IPR008147 Glutamine synthetase, beta-Grasp domain BF28_1971 IPR027303 Glutamine synthetase, glycine-rich site BF28_1971 IPR001637 Glutamine synthetase class-I, adenylation site BF28_1971 IPR004809 Glutamine synthetase type I BF28_1971 IPR027302 Glutamine synthetase, N-terminal conserved site BF28_1972 IPR010998 Integrase/recombinase, N-terminal BF28_1972 IPR004107 Integrase, SAM-like, N-terminal BF28_1972 IPR011010 DNA breaking-rejoining enzyme, catalytic core BF28_1972 IPR013762 Integrase-like, catalytic domain superfamily BF28_1972 IPR002104 Integrase, catalytic domain BF28_198 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BF28_198 IPR003682 rRNA small subunit methyltransferase G BF28_199 IPR036086 ParB/Sulfiredoxin superfamily BF28_199 IPR004437 ParB/RepB/Spo0J partition protein BF28_199 IPR023705 Nucleoid occlusion protein BF28_199 IPR041468 ParB/Spo0J, HTH domain BF28_199 IPR003115 ParB/Sulfiredoxin BF28_1990 IPR036098 Thymidylate synthase ThyX superfamily BF28_1990 IPR003669 Thymidylate synthase ThyX BF28_1997 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 BF28_1997 IPR013324 RNA polymerase sigma factor, region 3/4-like BF28_1997 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_1997 IPR014284 RNA polymerase sigma-70 like domain BF28_2 IPR020855 Ureohydrolase, manganese-binding site BF28_2 IPR023696 Ureohydrolase domain superfamily BF28_2 IPR014033 Arginase BF28_2 IPR006035 Ureohydrolase BF28_20 IPR041262 Spore germination GerD, central core domain BF28_200 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_200 IPR025669 AAA domain BF28_201 IPR041468 ParB/Spo0J, HTH domain BF28_201 IPR004437 ParB/RepB/Spo0J partition protein BF28_201 IPR003115 ParB/Sulfiredoxin BF28_201 IPR036086 ParB/Sulfiredoxin superfamily BF28_202 IPR009665 Protein of unknown function DUF1256 BF28_202 IPR023430 Peptidase HybD-like domain superfamily BF28_2027 IPR002502 N-acetylmuramoyl-L-alanine amidase domain BF28_2027 IPR038200 GW domain superfamily BF28_2027 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily BF28_2027 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain BF28_2027 IPR025987 GW domain BF28_2029 IPR003593 AAA+ ATPase domain BF28_2029 IPR003439 ABC transporter-like BF28_2029 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_2029 IPR017871 ABC transporter, conserved site BF28_203 IPR006685 Mechanosensitive ion channel MscS BF28_203 IPR023408 Mechanosensitive ion channel MscS domain superfamily BF28_203 IPR011066 Mechanosensitive ion channel MscS, C-terminal BF28_203 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 BF28_203 IPR010920 LSM domain superfamily BF28_2034 IPR041129 CdiI immunity protein BF28_2036 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_2036 IPR005149 Transcription regulator PadR, N-terminal BF28_2036 IPR036390 Winged helix DNA-binding domain superfamily BF28_2039 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_2039 IPR036390 Winged helix DNA-binding domain superfamily BF28_2039 IPR006197 Peptidase S24, LexA-like BF28_2039 IPR006199 LexA repressor, DNA-binding domain BF28_2039 IPR036286 LexA/Signal peptidase-like superfamily BF28_2039 IPR039418 LexA-like BF28_2039 IPR006200 Transcription regulator LexA BF28_2039 IPR011991 ArsR-like helix-turn-helix domain BF28_2039 IPR015927 Peptidase S24/S26A/S26B/S26C BF28_204 IPR009296 Protein of unknown function DUF951 BF28_2040 IPR006119 Resolvase, N-terminal catalytic domain BF28_2040 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily BF28_2041 IPR009242 Protein of unknown function DUF896 BF28_2042 IPR006146 5'-Nucleotidase, conserved site BF28_2042 IPR036907 5'-Nucleotidase, C-terminal domain superfamily BF28_2042 IPR008334 5'-Nucleotidase, C-terminal BF28_2042 IPR029052 Metallo-dependent phosphatase-like BF28_2042 IPR041827 CpdB, N-terminal metallophosphatase domain BF28_2042 IPR019931 LPXTG cell wall anchor domain BF28_2042 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type BF28_2042 IPR006179 5'-Nucleotidase/apyrase BF28_2044 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_2044 IPR012693 ABC transporter, phosphonate import, PhnC BF28_2044 IPR003439 ABC transporter-like BF28_2044 IPR017871 ABC transporter, conserved site BF28_2044 IPR003593 AAA+ ATPase domain BF28_2045 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BF28_2045 IPR035906 MetI-like superfamily BF28_2045 IPR005769 ABC transporter, permease PhnE/PtxC BF28_2046 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BF28_2046 IPR035906 MetI-like superfamily BF28_2046 IPR005769 ABC transporter, permease PhnE/PtxC BF28_2047 IPR005475 Transketolase-like, pyrimidine-binding domain BF28_2047 IPR005478 Transketolase, bacterial-like BF28_2047 IPR020826 Transketolase binding site BF28_2047 IPR033248 Transketolase, C-terminal domain BF28_2047 IPR033247 Transketolase family BF28_2047 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II BF28_2047 IPR005474 Transketolase, N-terminal BF28_2047 IPR029061 Thiamin diphosphate-binding fold BF28_2048 IPR019683 Sporulation inhibitor of replication protein SirA BF28_2048 IPR038449 SirA superfamily BF28_2049 IPR005359 Protein with unknown function UPF0154 BF28_205 IPR023192 TGS-like domain superfamily BF28_205 IPR012676 TGS-like BF28_205 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 BF28_205 IPR013029 YchF, C-terminal domain BF28_205 IPR041706 YchF, N-terminal BF28_205 IPR004095 TGS BF28_205 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_205 IPR006073 GTP binding domain BF28_205 IPR012675 Beta-grasp domain superfamily BF28_205 IPR031167 OBG-type guanine nucleotide-binding (G) domain BF28_2050 IPR036640 ABC transporter type 1, transmembrane domain superfamily BF28_2050 IPR003439 ABC transporter-like BF28_2050 IPR011527 ABC transporter type 1, transmembrane domain BF28_2050 IPR003593 AAA+ ATPase domain BF28_2050 IPR017871 ABC transporter, conserved site BF28_2050 IPR039421 Type I protein exporter BF28_2050 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_2051 IPR003439 ABC transporter-like BF28_2051 IPR003593 AAA+ ATPase domain BF28_2051 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_2051 IPR036640 ABC transporter type 1, transmembrane domain superfamily BF28_2051 IPR011527 ABC transporter type 1, transmembrane domain BF28_2051 IPR039421 Type I protein exporter BF28_2054 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily BF28_2054 IPR036365 PGBD-like superfamily BF28_2054 IPR036366 PGBD superfamily BF28_2054 IPR002502 N-acetylmuramoyl-L-alanine amidase domain BF28_2054 IPR002477 Peptidoglycan binding-like BF28_2055 IPR006047 Glycosyl hydrolase, family 13, catalytic domain BF28_2055 IPR002044 Carbohydrate binding module family 20 BF28_2055 IPR003961 Fibronectin type III BF28_2055 IPR004185 Glycoside hydrolase, family 13, N-terminal Ig-like domain BF28_2055 IPR013780 Glycosyl hydrolase, all-beta BF28_2055 IPR036116 Fibronectin type III superfamily BF28_2055 IPR013783 Immunoglobulin-like fold BF28_2055 IPR017853 Glycoside hydrolase superfamily BF28_2055 IPR013784 Carbohydrate-binding-like fold BF28_2055 IPR014756 Immunoglobulin E-set BF28_2055 IPR001119 S-layer homology domain BF28_2055 IPR031319 Alpha-amylase, C-terminal domain BF28_2057 IPR002781 Transmembrane protein TauE-like BF28_2059 IPR020476 NUDIX hydrolase BF28_2059 IPR006357 HAD-superfamily hydrolase, subfamily IIA BF28_2059 IPR023214 HAD superfamily BF28_2059 IPR000086 NUDIX hydrolase domain BF28_2059 IPR020084 NUDIX hydrolase, conserved site BF28_2059 IPR036412 HAD-like superfamily BF28_2059 IPR015797 NUDIX hydrolase-like domain superfamily BF28_206 IPR020815 Ribosomal protein S6, conserved site BF28_206 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 BF28_206 IPR000529 Ribosomal protein S6 BF28_206 IPR020814 Ribosomal protein S6, plastid/chloroplast BF28_206 IPR035980 Ribosomal protein S6 superfamily BF28_2060 IPR005261 Conserved hypothetical protein CHP00659 BF28_2060 IPR007300 CidB/LrgB family BF28_2061 IPR023760 Holin-like protein CidA BF28_2061 IPR005538 LrgA/CidA family BF28_2062 IPR037411 HTH-type transcriptional regulator AlsR, PBP2 domain BF28_2062 IPR005119 LysR, substrate-binding BF28_2062 IPR036390 Winged helix DNA-binding domain superfamily BF28_2062 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_2062 IPR000847 Transcription regulator HTH, LysR BF28_2064 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_2064 IPR003439 ABC transporter-like BF28_2064 IPR003593 AAA+ ATPase domain BF28_2064 IPR017871 ABC transporter, conserved site BF28_2069 IPR003834 Cytochrome C biogenesis protein, transmembrane domain BF28_207 IPR011344 Single-stranded DNA-binding protein BF28_207 IPR000424 Primosome PriB/single-strand DNA-binding BF28_207 IPR012340 Nucleic acid-binding, OB-fold BF28_2070 IPR031306 CcdC protein BF28_2074 IPR020203 Uncharacterised protein family, YneK BF28_2078 IPR013216 Methyltransferase type 11 BF28_2078 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BF28_2079 IPR015111 Hut operon regulatory protein HutP BF28_2079 IPR036482 Hut operon regulatory protein HutP superfamily BF28_2079 IPR023552 Hut operon regulatory protein HutP, bacillales BF28_208 IPR036870 Ribosomal protein S18 superfamily BF28_208 IPR001648 Ribosomal protein S18 BF28_208 IPR018275 Ribosomal protein S18, conserved site BF28_2080 IPR008948 L-Aspartase-like BF28_2080 IPR005921 Histidine ammonia-lyase BF28_2080 IPR001106 Aromatic amino acid lyase BF28_2080 IPR024083 Fumarase/histidase, N-terminal BF28_2080 IPR022313 Phenylalanine/histidine ammonia-lyases, active site BF28_2081 IPR036190 Urocanase superfamily BF28_2081 IPR035401 Urocanase, C-terminal domain BF28_2081 IPR038364 Urocanase, central domain superfamily BF28_2081 IPR023636 Urocanase conserved site BF28_2081 IPR023637 Urocanase BF28_2081 IPR035085 Urocanase, Rossmann-like domain BF28_2081 IPR035400 Urocanase, N-terminal domain BF28_2082 IPR006680 Amidohydrolase-related BF28_2082 IPR005920 Imidazolonepropionase BF28_2082 IPR011059 Metal-dependent hydrolase, composite domain superfamily BF28_2082 IPR032466 Metal-dependent hydrolase BF28_2083 IPR023696 Ureohydrolase domain superfamily BF28_2083 IPR020855 Ureohydrolase, manganese-binding site BF28_2083 IPR005923 Formiminoglutamase BF28_2083 IPR006035 Ureohydrolase BF28_2084 IPR003711 CarD-like/TRCF domain BF28_2084 IPR036101 CarD-like/TRCF domain superfamily BF28_2084 IPR042215 CarD-like, C-terminal domain BF28_2085 IPR013785 Aldolase-type TIM barrel BF28_2085 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal BF28_2086 IPR013785 Aldolase-type TIM barrel BF28_2086 IPR024188 Glutamate synthase large subunit-like protein BF28_2086 IPR002932 Glutamate synthase domain BF28_2086 IPR027283 Glutamate synthase large subunit-like protein, bacteria BF28_2087 IPR011851 Sodium/proline symporter BF28_2087 IPR018212 Sodium/solute symporter, conserved site BF28_2087 IPR038377 Sodium/glucose symporter superfamily BF28_2087 IPR001734 Sodium/solute symporter BF28_2088 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain BF28_2088 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BF28_2088 IPR037523 Vicinal oxygen chelate (VOC) domain BF28_2089 IPR002925 Dienelactone hydrolase BF28_2089 IPR029058 Alpha/Beta hydrolase fold BF28_209 IPR018710 Protein of unknown function DUF2232 BF28_2090 IPR000014 PAS domain BF28_2090 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BF28_2090 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BF28_2090 IPR013767 PAS fold BF28_2090 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BF28_2090 IPR035965 PAS domain superfamily BF28_2090 IPR003594 Histidine kinase/HSP90-like ATPase BF28_2090 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BF28_2090 IPR005467 Histidine kinase domain BF28_2092 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal BF28_2092 IPR003740 Uncharacterised membrane protein YitT BF28_2092 IPR019264 Domain of unknown function DUF2179 BF28_2098 IPR008462 CsbD-like domain BF28_2098 IPR036629 YjbJ superfamily BF28_21 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_21 IPR000808 Mrp, conserved site BF28_21 IPR019591 Mrp/NBP35 ATP-binding protein BF28_21 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 BF28_210 IPR000160 GGDEF domain BF28_210 IPR038763 DHH phosphoesterase superfamily BF28_210 IPR003156 DHHA1 domain BF28_210 IPR014528 Cyclic-di-AMP phosphodiesterase GdpP/PdeA BF28_210 IPR001667 DDH domain BF28_2101 IPR020845 AMP-binding, conserved site BF28_2101 IPR000873 AMP-dependent synthetase/ligase BF28_2101 IPR042099 AMP-dependent synthetase-like superfamily BF28_2101 IPR025110 AMP-binding enzyme, C-terminal domain BF28_2102 IPR003784 BioY protein BF28_2103 IPR042099 AMP-dependent synthetase-like superfamily BF28_2103 IPR000873 AMP-dependent synthetase/ligase BF28_2103 IPR020845 AMP-binding, conserved site BF28_2103 IPR025110 AMP-binding enzyme, C-terminal domain BF28_2104 IPR020617 Thiolase, C-terminal BF28_2104 IPR020613 Thiolase, conserved site BF28_2104 IPR020616 Thiolase, N-terminal BF28_2104 IPR002155 Thiolase BF28_2104 IPR016039 Thiolase-like BF28_2106 IPR000086 NUDIX hydrolase domain BF28_2106 IPR036412 HAD-like superfamily BF28_2106 IPR020084 NUDIX hydrolase, conserved site BF28_2106 IPR006357 HAD-superfamily hydrolase, subfamily IIA BF28_2106 IPR023214 HAD superfamily BF28_2106 IPR020476 NUDIX hydrolase BF28_2106 IPR015797 NUDIX hydrolase-like domain superfamily BF28_2107 IPR018165 Alanyl-tRNA synthetase, class IIc, core domain BF28_2107 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria BF28_2107 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal BF28_2107 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily BF28_2107 IPR003156 DHHA1 domain BF28_2107 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily BF28_2107 IPR009000 Translation protein, beta-barrel domain superfamily BF28_2107 IPR012947 Threonyl/alanyl tRNA synthetase, SAD BF28_2107 IPR002318 Alanine-tRNA ligase, class IIc BF28_2109 IPR005829 Sugar transporter, conserved site BF28_2109 IPR011701 Major facilitator superfamily BF28_2109 IPR020846 Major facilitator superfamily domain BF28_2109 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG BF28_2109 IPR036259 MFS transporter superfamily BF28_211 IPR036935 Ribosomal protein L9, N-terminal domain superfamily BF28_211 IPR020070 Ribosomal protein L9, N-terminal BF28_211 IPR036791 Ribosomal protein L9, C-terminal domain superfamily BF28_211 IPR020069 Ribosomal protein L9, C-terminal BF28_211 IPR020594 Ribosomal protein L9, bacteria/chloroplast BF28_211 IPR009027 Ribosomal protein L9/RNase H1, N-terminal BF28_211 IPR000244 Ribosomal protein L9 BF28_2111 IPR012614 Small acid-soluble spore protein, SspP BF28_2113 IPR026402 Chitooligosaccharide deacetylase NodB BF28_2113 IPR002509 NodB homology domain BF28_2113 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel BF28_2114 IPR012613 Small acid-soluble spore protein, SspO BF28_2115 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 BF28_2115 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain BF28_2115 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel BF28_2115 IPR006249 Aconitase/Iron-responsive element-binding protein 2 BF28_2115 IPR018136 Aconitase family, 4Fe-4S cluster binding site BF28_2115 IPR036008 Aconitase, iron-sulfur domain BF28_2115 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain BF28_2116 IPR039421 Type I protein exporter BF28_2116 IPR011527 ABC transporter type 1, transmembrane domain BF28_2116 IPR036640 ABC transporter type 1, transmembrane domain superfamily BF28_2116 IPR003439 ABC transporter-like BF28_2116 IPR003593 AAA+ ATPase domain BF28_2116 IPR017871 ABC transporter, conserved site BF28_2116 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_2118 IPR036249 Thioredoxin-like superfamily BF28_2118 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant BF28_2118 IPR013766 Thioredoxin domain BF28_2119 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain BF28_2119 IPR040982 DNA polymerase III alpha subunit finger domain BF28_2119 IPR024754 DNA polymerase III polC-like, N-terminal domain II BF28_2119 IPR029460 DNA polymerase, helix-hairpin-helix motif BF28_2119 IPR013520 Exonuclease, RNase T/DNA polymerase III BF28_2119 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain BF28_2119 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type BF28_2119 IPR004013 PHP domain BF28_2119 IPR003141 Polymerase/histidinol phosphatase, N-terminal BF28_2119 IPR006308 DNA polymerase III, alpha subunit, Gram-positive type BF28_2119 IPR012337 Ribonuclease H-like superfamily BF28_2119 IPR036397 Ribonuclease H superfamily BF28_2119 IPR012340 Nucleic acid-binding, OB-fold BF28_212 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily BF28_212 IPR007692 DNA helicase, DnaB type BF28_212 IPR007694 DNA helicase, DnaB-like, C-terminal BF28_212 IPR007693 DNA helicase, DnaB-like, N-terminal BF28_212 IPR003593 AAA+ ATPase domain BF28_212 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_212 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal BF28_2120 IPR025004 Transcriptional regulatory protein SenN/SenS BF28_2121 IPR012612 Small acid-soluble spore protein, SspN BF28_2122 IPR017524 Small acid-soluble spore protein, thioredoxin-like BF28_2123 IPR041704 CFLE, GH18 catalytic domain BF28_2123 IPR011583 Chitinase II BF28_2123 IPR029070 Chitinase insertion domain superfamily BF28_2123 IPR017853 Glycoside hydrolase superfamily BF28_2123 IPR001223 Glycoside hydrolase family 18, catalytic domain BF28_2123 IPR036779 LysM domain superfamily BF28_2123 IPR018392 LysM domain BF28_2124 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family BF28_2124 IPR006683 Thioesterase domain BF28_2124 IPR029069 HotDog domain superfamily BF28_2125 IPR008326 Uncharacterised conserved protein UCP034852 BF28_2125 IPR000361 FeS cluster biogenesis BF28_2125 IPR035903 HesB-like domain superfamily BF28_2126 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY BF28_2127 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic BF28_2127 IPR001150 Glycine radical domain BF28_2127 IPR019777 Formate C-acetyltransferase glycine radical, conserved site BF28_2127 IPR005144 ATP-cone domain BF28_2128 IPR007197 Radical SAM BF28_2128 IPR001989 Radical-activating enzyme, conserved site BF28_2128 IPR034465 Pyruvate formate-lyase activase BF28_2128 IPR012838 Pyruvate formate-lyase 1 activating enzyme BF28_2128 IPR013785 Aldolase-type TIM barrel BF28_2128 IPR034457 Organic radical-activating enzymes BF28_2129 IPR039420 Transcriptional regulatory protein WalR-like BF28_2129 IPR011006 CheY-like superfamily BF28_2129 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_2129 IPR001867 OmpR/PhoB-type DNA-binding domain BF28_2129 IPR016032 Signal transduction response regulator, C-terminal effector BF28_2129 IPR001789 Signal transduction response regulator, receiver domain BF28_213 IPR018220 Adenylosuccinate synthase, GTP-binding site BF28_213 IPR033128 Adenylosuccinate synthase, active site BF28_213 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_213 IPR001114 Adenylosuccinate synthetase BF28_213 IPR042111 Adenylosuccinate synthetase, domain 3 BF28_213 IPR042110 Adenylosuccinate synthetase, domain 2 BF28_213 IPR042109 Adenylosuccinate synthetase, domain 1 BF28_2130 IPR001478 PDZ domain BF28_2130 IPR036034 PDZ superfamily BF28_2130 IPR009003 Peptidase S1, PA clan BF28_2130 IPR001940 Peptidase S1C BF28_2131 IPR003781 CoA-binding BF28_2131 IPR036291 NAD(P)-binding domain superfamily BF28_2132 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal BF28_2132 IPR013760 DNA topoisomerase, type IIA-like domain superfamily BF28_2132 IPR001241 DNA topoisomerase, type IIA BF28_2132 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BF28_2132 IPR020568 Ribosomal protein S5 domain 2-type fold BF28_2132 IPR005740 DNA topoisomerase 4 subunit B, Firmicutes/Mollicutes BF28_2132 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BF28_2132 IPR003594 Histidine kinase/HSP90-like ATPase BF28_2132 IPR002288 DNA gyrase B subunit, C-terminal BF28_2132 IPR018522 DNA topoisomerase, type IIA, conserved site BF28_2132 IPR006171 TOPRIM domain BF28_2132 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 BF28_2133 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal BF28_2133 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat BF28_2133 IPR005741 DNA topoisomerase IV subunit A, Gram-positive BF28_2133 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily BF28_2133 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta BF28_2133 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal BF28_2133 IPR013760 DNA topoisomerase, type IIA-like domain superfamily BF28_2134 IPR004104 Oxidoreductase, C-terminal BF28_2134 IPR036291 NAD(P)-binding domain superfamily BF28_2134 IPR000683 Oxidoreductase, N-terminal BF28_2136 IPR017871 ABC transporter, conserved site BF28_2136 IPR025302 Domain of unknown function DUF4162 BF28_2136 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_2136 IPR003439 ABC transporter-like BF28_2136 IPR003593 AAA+ ATPase domain BF28_2138 IPR039425 RNA polymerase sigma-70 like BF28_2138 IPR014284 RNA polymerase sigma-70 like domain BF28_2138 IPR014294 RNA polymerase sigma-W, bacillaceae BF28_2138 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site BF28_2138 IPR007627 RNA polymerase sigma-70 region 2 BF28_2138 IPR013325 RNA polymerase sigma factor, region 2 BF28_2138 IPR013324 RNA polymerase sigma factor, region 3/4-like BF28_2138 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 BF28_2138 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_2140 IPR004474 Cell envelope-related transcriptional attenuator domain BF28_2141 IPR001991 Sodium:dicarboxylate symporter BF28_2141 IPR023954 C4-dicarboxylate transport protein BF28_2141 IPR018107 Sodium:dicarboxylate symporter, conserved site BF28_2141 IPR036458 Sodium:dicarboxylate symporter superfamily BF28_2142 IPR023765 Solute-binding protein family 5, conserved site BF28_2142 IPR039424 Solute-binding protein family 5 BF28_2142 IPR030678 Peptide/nickel binding protein, MppA-type BF28_2142 IPR000914 Solute-binding protein family 5 domain BF28_2143 IPR039424 Solute-binding protein family 5 BF28_2143 IPR023765 Solute-binding protein family 5, conserved site BF28_2143 IPR030678 Peptide/nickel binding protein, MppA-type BF28_2143 IPR000914 Solute-binding protein family 5 domain BF28_2144 IPR030678 Peptide/nickel binding protein, MppA-type BF28_2144 IPR039424 Solute-binding protein family 5 BF28_2144 IPR023765 Solute-binding protein family 5, conserved site BF28_2144 IPR000914 Solute-binding protein family 5 domain BF28_2145 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BF28_2145 IPR013216 Methyltransferase type 11 BF28_2154 IPR004995 Bacillus/Clostridium Ger spore germination protein BF28_2155 IPR006656 Molybdopterin oxidoreductase BF28_2155 IPR036010 2Fe-2S ferredoxin-like superfamily BF28_2155 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain BF28_2155 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BF28_2155 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BF28_2155 IPR009010 Aspartate decarboxylase-like domain superfamily BF28_2155 IPR041924 Formate dehydrogenase H, N-terminal BF28_2155 IPR006478 Formate dehydrogenase, alpha subunit BF28_2155 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding BF28_2155 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain BF28_2155 IPR006657 Molybdopterin dinucleotide-binding domain BF28_2156 IPR012440 Protein of unknown function DUF1641 BF28_2157 IPR018745 Domain of unknown function DUF2294 BF28_2158 IPR003786 Sulfur carrier protein FdhD BF28_2158 IPR016193 Cytidine deaminase-like BF28_2159 IPR013483 Molybdenum cofactor biosynthesis protein A BF28_2159 IPR013785 Aldolase-type TIM barrel BF28_2159 IPR006638 Elp3/MiaB/NifB BF28_2159 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site BF28_2159 IPR007197 Radical SAM BF28_2159 IPR010505 Molybdenum cofactor synthesis C-terminal BF28_2160 IPR000292 Formate/nitrite transporter BF28_2160 IPR024002 Formate/nitrite transporter, conserved site BF28_2160 IPR023271 Aquaporin-like BF28_2161 IPR035985 Ubiquitin-activating enzyme BF28_2161 IPR000594 THIF-type NAD/FAD binding fold BF28_2162 IPR036135 MoeA, N-terminal and linker domain superfamily BF28_2162 IPR005110 MoeA, N-terminal and linker domain BF28_2162 IPR036688 MoeA, C-terminal, domain IV superfamily BF28_2162 IPR005111 MoeA, C-terminal, domain IV BF28_2162 IPR038987 Molybdopterin biosynthesis protein MoeA-like BF28_2162 IPR001453 MoaB/Mog domain BF28_2162 IPR036425 MoaB/Mog-like domain superfamily BF28_2163 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily BF28_2163 IPR003448 Molybdopterin biosynthesis MoaE BF28_2165 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 BF28_2165 IPR019591 Mrp/NBP35 ATP-binding protein BF28_2165 IPR000808 Mrp, conserved site BF28_2165 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_2168 IPR010718 Protein of unknown function DUF1294 BF28_2169 IPR000620 EamA domain BF28_2169 IPR004626 RarD protein BF28_2170 IPR003832 Protein of unknown function DUF212 BF28_2171 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid BF28_2171 IPR018333 Squalene cyclase BF28_2171 IPR032697 Squalene cyclase, N-terminal BF28_2171 IPR032696 Squalene cyclase, C-terminal BF28_2172 IPR025435 YfhD-like protein BF28_2173 IPR020904 Short-chain dehydrogenase/reductase, conserved site BF28_2173 IPR002347 Short-chain dehydrogenase/reductase SDR BF28_2173 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase BF28_2173 IPR036291 NAD(P)-binding domain superfamily BF28_2174 IPR016162 Aldehyde dehydrogenase, N-terminal BF28_2174 IPR015590 Aldehyde dehydrogenase domain BF28_2174 IPR016163 Aldehyde dehydrogenase, C-terminal BF28_2174 IPR016161 Aldehyde/histidinol dehydrogenase BF28_2174 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent BF28_2174 IPR029510 Aldehyde dehydrogenase, glutamic acid active site BF28_2176 IPR038377 Sodium/glucose symporter superfamily BF28_2176 IPR011849 Sodium/pantothenate symporter BF28_2176 IPR001734 Sodium/solute symporter BF28_2176 IPR018212 Sodium/solute symporter, conserved site BF28_2177 IPR036452 Ribonucleoside hydrolase-like BF28_2177 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain BF28_2177 IPR023186 Inosine/uridine-preferring nucleoside hydrolase BF28_2177 IPR022976 Non-specific ribonucleoside hydrolase RihC BF28_2179 IPR008948 L-Aspartase-like BF28_2179 IPR009049 Argininosuccinate lyase BF28_2179 IPR022761 Fumarate lyase, N-terminal BF28_2179 IPR000362 Fumarate lyase family BF28_2179 IPR024083 Fumarase/histidase, N-terminal BF28_2179 IPR029419 Argininosuccinate lyase, C-terminal BF28_218 IPR016032 Signal transduction response regulator, C-terminal effector BF28_218 IPR001789 Signal transduction response regulator, receiver domain BF28_218 IPR039420 Transcriptional regulatory protein WalR-like BF28_218 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_218 IPR011006 CheY-like superfamily BF28_218 IPR001867 OmpR/PhoB-type DNA-binding domain BF28_2181 IPR020904 Short-chain dehydrogenase/reductase, conserved site BF28_2181 IPR036291 NAD(P)-binding domain superfamily BF28_2181 IPR002347 Short-chain dehydrogenase/reductase SDR BF28_2183 IPR018357 Hexapeptide transferase, conserved site BF28_2183 IPR001451 Hexapeptide repeat BF28_2183 IPR011004 Trimeric LpxA-like superfamily BF28_2185 IPR020084 NUDIX hydrolase, conserved site BF28_2185 IPR020476 NUDIX hydrolase BF28_2185 IPR015797 NUDIX hydrolase-like domain superfamily BF28_2185 IPR000086 NUDIX hydrolase domain BF28_2185 IPR022927 RNA pyrophosphohydrolase RppH BF28_2187 IPR001094 Flavodoxin-like BF28_2187 IPR008254 Flavodoxin/nitric oxide synthase BF28_2187 IPR029039 Flavoprotein-like superfamily BF28_2187 IPR010087 Flavodoxin, short chain BF28_2188 IPR015943 WD40/YVTN repeat-like-containing domain superfamily BF28_2189 IPR012340 Nucleic acid-binding, OB-fold BF28_2189 IPR012156 Cold shock, CspA BF28_2189 IPR011129 Cold shock domain BF28_2189 IPR002059 Cold-shock protein, DNA-binding BF28_2189 IPR019844 Cold-shock (CSD) domain BF28_219 IPR003594 Histidine kinase/HSP90-like ATPase BF28_219 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BF28_219 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BF28_219 IPR003660 HAMP domain BF28_219 IPR005467 Histidine kinase domain BF28_219 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BF28_219 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BF28_219 IPR000014 PAS domain BF28_219 IPR000700 PAS-associated, C-terminal BF28_219 IPR035965 PAS domain superfamily BF28_219 IPR001610 PAC motif BF28_2192 IPR025006 Protein of unknown function DUF3900 BF28_2192 IPR025012 Domain of unknown function DUF3898 BF28_2194 IPR007391 Vancomycin resistance VanW BF28_2195 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BF28_2195 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain BF28_2195 IPR037523 Vicinal oxygen chelate (VOC) domain BF28_2195 IPR000486 Extradiol ring-cleavage dioxygenase, class I /II BF28_2198 IPR003416 MgtC/SapB/SrpB/YhiD family BF28_2199 IPR013661 Peptidase M9, collagenase, N-terminal domain BF28_2199 IPR041379 Collagenase ColG, catalytic helper subdomain BF28_2199 IPR013783 Immunoglobulin-like fold BF28_2199 IPR002169 Peptidase M9A/M9B, collagenase, bacterial BF28_2199 IPR022409 PKD/Chitinase domain BF28_2199 IPR000601 PKD domain BF28_2199 IPR035986 PKD domain superfamily BF28_22 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain BF28_22 IPR014234 N-acetylmuramoyl-L-alanine amidase CwlD BF28_220 IPR009996 Regulatory protein YycH BF28_220 IPR042274 Regulatory protein YycH/YycI , domain 2 BF28_2200 IPR029045 ClpP/crotonase-like domain superfamily BF28_2200 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site BF28_2200 IPR001753 Enoyl-CoA hydratase/isomerase BF28_2200 IPR014748 Enoyl-CoA hydratase, C-terminal BF28_2201 IPR029044 Nucleotide-diphospho-sugar transferases BF28_2201 IPR001173 Glycosyltransferase 2-like BF28_2202 IPR015424 Pyridoxal phosphate-dependent transferase BF28_2202 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BF28_2202 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase BF28_2203 IPR011004 Trimeric LpxA-like superfamily BF28_2203 IPR001451 Hexapeptide repeat BF28_2207 IPR004490 Glycolate oxidase subunit GlcD BF28_2207 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 BF28_2207 IPR006094 FAD linked oxidase, N-terminal BF28_2207 IPR004113 FAD-linked oxidase, C-terminal BF28_2207 IPR016164 FAD-linked oxidase-like, C-terminal BF28_2207 IPR036318 FAD-binding, type PCMH-like superfamily BF28_2207 IPR016166 FAD-binding domain, PCMH-type BF28_2208 IPR038770 Sodium/solute symporter superfamily BF28_2208 IPR004710 Bile acid:sodium symporter BF28_2208 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 BF28_221 IPR042274 Regulatory protein YycH/YycI , domain 2 BF28_221 IPR018604 Regulatory protein YycH-like BF28_2212 IPR012349 FMN-binding split barrel BF28_2212 IPR007396 Transcriptional regulator PAI 2-type BF28_2214 IPR019734 Tetratricopeptide repeat BF28_2214 IPR013026 Tetratricopeptide repeat-containing domain BF28_2214 IPR040702 Response regulator aspartate phosphatase, N-terminal BF28_2214 IPR011990 Tetratricopeptide-like helical domain superfamily BF28_2215 IPR003846 Protein adenylyltransferase SelO BF28_2216 IPR036291 NAD(P)-binding domain superfamily BF28_2216 IPR011032 GroES-like superfamily BF28_2216 IPR013154 Alcohol dehydrogenase, N-terminal BF28_2216 IPR013149 Alcohol dehydrogenase, C-terminal BF28_2216 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 BF28_2216 IPR020843 Polyketide synthase, enoylreductase domain BF28_2216 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site BF28_2217 IPR036390 Winged helix DNA-binding domain superfamily BF28_2217 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_2217 IPR001845 HTH ArsR-type DNA-binding domain BF28_2217 IPR011991 ArsR-like helix-turn-helix domain BF28_2218 IPR036188 FAD/NAD(P)-binding domain superfamily BF28_2218 IPR002938 FAD-binding domain BF28_222 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BF28_222 IPR001279 Metallo-beta-lactamase BF28_2222 IPR030395 Glycerophosphodiester phosphodiesterase domain BF28_2222 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily BF28_2225 IPR000847 Transcription regulator HTH, LysR BF28_2225 IPR005119 LysR, substrate-binding BF28_2225 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_2225 IPR036390 Winged helix DNA-binding domain superfamily BF28_2226 IPR011701 Major facilitator superfamily BF28_2226 IPR020846 Major facilitator superfamily domain BF28_2226 IPR036259 MFS transporter superfamily BF28_2228 IPR001466 Beta-lactamase-related BF28_2228 IPR012338 Beta-lactamase/transpeptidase-like BF28_2229 IPR001567 Peptidase M3A/M3B catalytic domain BF28_2229 IPR004438 Peptidase M3B, oligoendopeptidase F BF28_2229 IPR013647 Oligopeptidase F, N-terminal domain BF28_2229 IPR042088 Oligoendopeptidase F, C-terminal domain BF28_223 IPR036034 PDZ superfamily BF28_223 IPR009003 Peptidase S1, PA clan BF28_223 IPR001940 Peptidase S1C BF28_223 IPR001478 PDZ domain BF28_2230 IPR001447 Arylamine N-acetyltransferase BF28_2230 IPR038765 Papain-like cysteine peptidase superfamily BF28_2231 IPR002625 Smr domain BF28_2231 IPR036063 Smr domain superfamily BF28_2231 IPR005747 Endonuclease MutS2 BF28_2231 IPR036187 DNA mismatch repair protein MutS, core domain superfamily BF28_2231 IPR007696 DNA mismatch repair protein MutS, core BF28_2231 IPR000432 DNA mismatch repair protein MutS, C-terminal BF28_2231 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_2236 IPR011032 GroES-like superfamily BF28_2236 IPR036291 NAD(P)-binding domain superfamily BF28_2236 IPR013149 Alcohol dehydrogenase, C-terminal BF28_2236 IPR020843 Polyketide synthase, enoylreductase domain BF28_2236 IPR013154 Alcohol dehydrogenase, N-terminal BF28_2237 IPR036390 Winged helix DNA-binding domain superfamily BF28_2237 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_2237 IPR000847 Transcription regulator HTH, LysR BF28_2237 IPR005119 LysR, substrate-binding BF28_2239 IPR021224 Protein of unknown function DUF2690 BF28_2243 IPR025062 Protein of unknown function DUF4003 BF28_2244 IPR003719 Phenazine biosynthesis PhzF protein BF28_2245 IPR008535 Protein of unknown function DUF817 BF28_2246 IPR037294 ABC transporter, BtuC-like BF28_2246 IPR000522 ABC transporter, permease protein, BtuC-like BF28_2247 IPR000522 ABC transporter, permease protein, BtuC-like BF28_2247 IPR037294 ABC transporter, BtuC-like BF28_2248 IPR002491 ABC transporter periplasmic binding domain BF28_225 IPR029028 Alpha/beta knot methyltransferases BF28_225 IPR003742 RNA methyltransferase RlmH BF28_225 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal BF28_2251 IPR000802 Arsenical pump membrane protein, ArsB BF28_2251 IPR004680 Citrate transporter-like domain BF28_2252 IPR036492 Hypothetical protein YojF superfamily BF28_2252 IPR014934 Protein of unknown function DUF1806 BF28_2253 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related BF28_2253 IPR023841 Bacillithiol biosynthesis deacetylase BshB2 BF28_2253 IPR024078 Putative deacetylase LmbE-like domain superfamily BF28_2259 IPR005829 Sugar transporter, conserved site BF28_2259 IPR036259 MFS transporter superfamily BF28_2259 IPR020846 Major facilitator superfamily domain BF28_2259 IPR011701 Major facilitator superfamily BF28_2259 IPR004812 Drug resistance transporter Bcr/CmlA subfamily BF28_2260 IPR004840 Amino acid permease, conserved site BF28_2260 IPR004841 Amino acid permease/ SLC12A domain BF28_2261 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site BF28_2261 IPR020843 Polyketide synthase, enoylreductase domain BF28_2261 IPR036291 NAD(P)-binding domain superfamily BF28_2261 IPR011032 GroES-like superfamily BF28_2261 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 BF28_2261 IPR013149 Alcohol dehydrogenase, C-terminal BF28_2261 IPR013154 Alcohol dehydrogenase, N-terminal BF28_2262 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BF28_2262 IPR001279 Metallo-beta-lactamase BF28_2264 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_2264 IPR041628 ChlI/MoxR, AAA lid domain BF28_2264 IPR011703 ATPase, AAA-3 BF28_2272 IPR036188 FAD/NAD(P)-binding domain superfamily BF28_2274 IPR012338 Beta-lactamase/transpeptidase-like BF28_2274 IPR001466 Beta-lactamase-related BF28_2280 IPR001018 Beta-lactamase, class-B, conserved site BF28_2280 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BF28_2280 IPR001279 Metallo-beta-lactamase BF28_2281 IPR001279 Metallo-beta-lactamase BF28_2281 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BF28_2281 IPR001018 Beta-lactamase, class-B, conserved site BF28_2284 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase BF28_2284 IPR010048 Hydroxylamine reductase BF28_2284 IPR011254 Prismane-like superfamily BF28_2284 IPR016100 Prismane, alpha-bundle BF28_2284 IPR016099 Prismane-like, alpha/beta-sandwich BF28_2287 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_2287 IPR003439 ABC transporter-like BF28_2287 IPR017871 ABC transporter, conserved site BF28_2287 IPR005894 Daunorubicin resistance ABC transporter ATP-binding subunit DrrA BF28_2287 IPR025302 Domain of unknown function DUF4162 BF28_2287 IPR003593 AAA+ ATPase domain BF28_2288 IPR000412 ABC-2 transporter BF28_2288 IPR013525 ABC-2 type transporter BF28_2289 IPR008523 Protein of unknown function DUF805 BF28_229 IPR013647 Oligopeptidase F, N-terminal domain BF28_229 IPR001567 Peptidase M3A/M3B catalytic domain BF28_229 IPR004438 Peptidase M3B, oligoendopeptidase F BF28_229 IPR042088 Oligoendopeptidase F, C-terminal domain BF28_2298 IPR009057 Homeobox-like domain superfamily BF28_2298 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily BF28_2298 IPR001647 DNA-binding HTH domain, TetR-type BF28_230 IPR001093 IMP dehydrogenase/GMP reductase BF28_230 IPR005994 Guanosine monophosphate reductase, type2 BF28_230 IPR001295 Dihydroorotate dehydrogenase, conserved site BF28_230 IPR013785 Aldolase-type TIM barrel BF28_230 IPR015875 IMP dehydrogenase / GMP reductase, conserved site BF28_2300 IPR029044 Nucleotide-diphospho-sugar transferases BF28_2300 IPR041038 TarS beta-glycosyltransferase C-terminal domain 1 BF28_2300 IPR001173 Glycosyltransferase 2-like BF28_2301 IPR014244 RNA polymerase sigma-I type BF28_2301 IPR013325 RNA polymerase sigma factor, region 2 BF28_2301 IPR007627 RNA polymerase sigma-70 region 2 BF28_2302 IPR024449 Anti-sigma factor RsgI, N-terminal BF28_2303 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel BF28_2303 IPR002509 NodB homology domain BF28_2303 IPR017219 Peptidoglycan GlcNAc deacetylase BF28_2303 IPR040802 Peptidoglycan GlcNAc deacetylase, N-terminal BF28_2304 IPR011991 ArsR-like helix-turn-helix domain BF28_2304 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_2304 IPR001845 HTH ArsR-type DNA-binding domain BF28_2304 IPR036390 Winged helix DNA-binding domain superfamily BF28_2307 IPR002938 FAD-binding domain BF28_2307 IPR036188 FAD/NAD(P)-binding domain superfamily BF28_2308 IPR036390 Winged helix DNA-binding domain superfamily BF28_2308 IPR002577 Helix-turn-helix, HxlR type BF28_2308 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_2309 IPR003680 Flavodoxin-like fold BF28_2309 IPR029039 Flavoprotein-like superfamily BF28_2310 IPR025110 AMP-binding enzyme, C-terminal domain BF28_2310 IPR020845 AMP-binding, conserved site BF28_2310 IPR042099 AMP-dependent synthetase-like superfamily BF28_2310 IPR000873 AMP-dependent synthetase/ligase BF28_2311 IPR016181 Acyl-CoA N-acyltransferase BF28_2311 IPR000182 GNAT domain BF28_2314 IPR003719 Phenazine biosynthesis PhzF protein BF28_2318 IPR001279 Metallo-beta-lactamase BF28_2318 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BF28_232 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain BF28_232 IPR028619 ATP-dependent RNA helicase DbpA BF28_232 IPR011545 DEAD/DEAH box helicase domain BF28_232 IPR001650 Helicase, C-terminal BF28_232 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily BF28_232 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_232 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site BF28_232 IPR014014 RNA helicase, DEAD-box type, Q motif BF28_232 IPR014001 Helicase superfamily 1/2, ATP-binding domain BF28_2321 IPR023210 NADP-dependent oxidoreductase domain BF28_2321 IPR036812 NADP-dependent oxidoreductase domain superfamily BF28_2322 IPR002577 Helix-turn-helix, HxlR type BF28_2322 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_2322 IPR036390 Winged helix DNA-binding domain superfamily BF28_2323 IPR036390 Winged helix DNA-binding domain superfamily BF28_2323 IPR002577 Helix-turn-helix, HxlR type BF28_2323 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_2324 IPR003333 Mycolic acid cyclopropane synthase BF28_2324 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BF28_2325 IPR004104 Oxidoreductase, C-terminal BF28_2325 IPR036291 NAD(P)-binding domain superfamily BF28_2325 IPR000683 Oxidoreductase, N-terminal BF28_2326 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily BF28_2326 IPR036390 Winged helix DNA-binding domain superfamily BF28_2326 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_2326 IPR000524 Transcription regulator HTH, GntR BF28_2326 IPR011663 UbiC transcription regulator-associated BF28_2327 IPR002577 Helix-turn-helix, HxlR type BF28_2327 IPR036390 Winged helix DNA-binding domain superfamily BF28_2327 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_2328 IPR006504 Transcriptional regulator Spx/MgsR BF28_2328 IPR036249 Thioredoxin-like superfamily BF28_2328 IPR006660 Arsenate reductase-like BF28_2328 IPR023731 Regulatory protein Spx BF28_2333 IPR004694 Hydroxy amino acid transporter BF28_2334 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BF28_2334 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain BF28_2334 IPR022858 Metallothiol transferase FosB BF28_2334 IPR037523 Vicinal oxygen chelate (VOC) domain BF28_2335 IPR005624 Haem-degrading BF28_2335 IPR010371 Uncharacterised protein family UPF0303 BF28_2335 IPR038084 GlcG-like domain superfamily BF28_2337 IPR011701 Major facilitator superfamily BF28_2337 IPR020846 Major facilitator superfamily domain BF28_2337 IPR036259 MFS transporter superfamily BF28_2338 IPR023210 NADP-dependent oxidoreductase domain BF28_2338 IPR036812 NADP-dependent oxidoreductase domain superfamily BF28_2338 IPR018170 Aldo/keto reductase, conserved site BF28_2338 IPR020471 Aldo/keto reductase BF28_234 IPR004254 AdipoR/Haemolysin-III-related BF28_234 IPR005744 Hly-III BF28_2341 IPR002577 Helix-turn-helix, HxlR type BF28_2341 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_2341 IPR036390 Winged helix DNA-binding domain superfamily BF28_2343 IPR016193 Cytidine deaminase-like BF28_2343 IPR016192 APOBEC/CMP deaminase, zinc-binding BF28_2343 IPR002125 Cytidine and deoxycytidylate deaminase domain BF28_2343 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal BF28_2343 IPR024072 Dihydrofolate reductase-like domain superfamily BF28_2343 IPR011549 Riboflavin-specific deaminase, C-terminal BF28_2343 IPR004794 Riboflavin biosynthesis protein RibD BF28_2344 IPR009206 Nucleotidase, putative BF28_2344 IPR023214 HAD superfamily BF28_2344 IPR036412 HAD-like superfamily BF28_2344 IPR010708 5'(3')-deoxyribonucleotidase BF28_2346 IPR004090 Chemotaxis methyl-accepting receptor BF28_2346 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain BF28_2346 IPR003660 HAMP domain BF28_2346 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain BF28_2348 IPR025711 PepSY domain BF28_2348 IPR023612 Peptidase M4 BF28_2348 IPR027268 Peptidase M4/M1, CTD superfamily BF28_2348 IPR011096 FTP domain BF28_2348 IPR001570 Peptidase M4, C-terminal BF28_2348 IPR013856 Peptidase M4 domain BF28_2349 IPR002347 Short-chain dehydrogenase/reductase SDR BF28_2349 IPR036291 NAD(P)-binding domain superfamily BF28_235 IPR016040 NAD(P)-binding domain BF28_235 IPR036291 NAD(P)-binding domain superfamily BF28_235 IPR005886 UDP-glucose 4-epimerase BF28_2351 IPR006162 Phosphopantetheine attachment site BF28_2351 IPR016039 Thiolase-like BF28_2351 IPR013968 Polyketide synthase, ketoreductase domain BF28_2351 IPR009081 Phosphopantetheine binding ACP domain BF28_2351 IPR020806 Polyketide synthase, phosphopantetheine-binding domain BF28_2351 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding BF28_2351 IPR013149 Alcohol dehydrogenase, C-terminal BF28_2351 IPR036291 NAD(P)-binding domain superfamily BF28_2351 IPR001227 Acyl transferase domain superfamily BF28_2351 IPR036736 ACP-like superfamily BF28_2351 IPR014043 Acyl transferase BF28_2351 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase BF28_2351 IPR032821 Ketoacyl-synthetase, C-terminal extension BF28_2351 IPR013154 Alcohol dehydrogenase, N-terminal BF28_2351 IPR011032 GroES-like superfamily BF28_2351 IPR018201 Beta-ketoacyl synthase, active site BF28_2351 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain BF28_2351 IPR020807 Polyketide synthase, dehydratase domain BF28_2351 IPR042104 Polyketide synthase, dehydratase domain superfamily BF28_2351 IPR020843 Polyketide synthase, enoylreductase domain BF28_2351 IPR014031 Beta-ketoacyl synthase, C-terminal BF28_2351 IPR014030 Beta-ketoacyl synthase, N-terminal BF28_2353 IPR019945 F420-dependent glucose-6-phosphate dehydrogenase-related BF28_2353 IPR019944 F420-dependent glucose-6-phosphate dehydrogenase BF28_2353 IPR011251 Luciferase-like domain BF28_2353 IPR036661 Luciferase-like domain superfamily BF28_2354 IPR013149 Alcohol dehydrogenase, C-terminal BF28_2354 IPR013154 Alcohol dehydrogenase, N-terminal BF28_2354 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site BF28_2354 IPR011032 GroES-like superfamily BF28_2354 IPR036291 NAD(P)-binding domain superfamily BF28_2354 IPR020843 Polyketide synthase, enoylreductase domain BF28_2354 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 BF28_2355 IPR001282 Glucose-6-phosphate dehydrogenase BF28_2355 IPR036291 NAD(P)-binding domain superfamily BF28_2355 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal BF28_2355 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding BF28_2355 IPR019796 Glucose-6-phosphate dehydrogenase, active site BF28_2356 IPR001282 Glucose-6-phosphate dehydrogenase BF28_2356 IPR019796 Glucose-6-phosphate dehydrogenase, active site BF28_2356 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal BF28_2356 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding BF28_2356 IPR036291 NAD(P)-binding domain superfamily BF28_2357 IPR033247 Transketolase family BF28_2357 IPR029061 Thiamin diphosphate-binding fold BF28_2357 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II BF28_2357 IPR005478 Transketolase, bacterial-like BF28_2357 IPR020826 Transketolase binding site BF28_2357 IPR005475 Transketolase-like, pyrimidine-binding domain BF28_2357 IPR033248 Transketolase, C-terminal domain BF28_2357 IPR005474 Transketolase, N-terminal BF28_2358 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily BF28_2358 IPR006183 6-phosphogluconate dehydrogenase BF28_2358 IPR036291 NAD(P)-binding domain superfamily BF28_2358 IPR006184 6-phosphogluconate-binding site BF28_2358 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding BF28_2358 IPR013328 6-phosphogluconate dehydrogenase, domain 2 BF28_2358 IPR006114 6-phosphogluconate dehydrogenase, C-terminal BF28_2358 IPR004849 6-phosphogluconate dehydrogenase, YqeC-type BF28_2359 IPR022999 Transaldolase type 3B, putative BF28_2359 IPR001585 Transaldolase/Fructose-6-phosphate aldolase BF28_2359 IPR013785 Aldolase-type TIM barrel BF28_2359 IPR004731 Transaldolase type 3B/Fructose-6-phosphate aldolase BF28_2359 IPR033919 Transaldolase/Fructose-6-phosphate aldolase, archaeal/bacterial BF28_2359 IPR018225 Transaldolase, active site BF28_2360 IPR003474 Gluconate transporter BF28_2361 IPR006002 Gluconate kinase BF28_2361 IPR018485 Carbohydrate kinase, FGGY, C-terminal BF28_2361 IPR000577 Carbohydrate kinase, FGGY BF28_2361 IPR018483 Carbohydrate kinase, FGGY, conserved site BF28_2361 IPR018484 Carbohydrate kinase, FGGY, N-terminal BF28_2362 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily BF28_2362 IPR015943 WD40/YVTN repeat-like-containing domain superfamily BF28_2362 IPR019405 Lactonase, 7-bladed beta propeller BF28_2363 IPR010696 Protein of unknown function DUF1272 BF28_2364 IPR001646 Pentapeptide repeat BF28_2365 IPR000620 EamA domain BF28_2367 IPR036291 NAD(P)-binding domain superfamily BF28_2367 IPR005886 UDP-glucose 4-epimerase BF28_2367 IPR001509 NAD-dependent epimerase/dehydratase BF28_2369 IPR013630 Methyltransferase putative zinc binding domain BF28_2369 IPR013691 C-methyltransferase BF28_2369 IPR038576 Methyltransferase putative zinc binding domain superfamily BF28_2369 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BF28_237 IPR003211 AmiS/UreI transporter BF28_237 IPR038523 AmiS/UreI transporter superfamily BF28_2370 IPR013445 CDP-glucose 4,6-dehydratase BF28_2370 IPR036291 NAD(P)-binding domain superfamily BF28_2370 IPR016040 NAD(P)-binding domain BF28_2371 IPR005835 Nucleotidyl transferase domain BF28_2371 IPR029044 Nucleotide-diphospho-sugar transferases BF28_2371 IPR013446 Glucose-1-phosphate cytidylyltransferase BF28_2373 IPR009061 Putative DNA-binding domain superfamily BF28_2373 IPR000551 MerR-type HTH domain BF28_2374 IPR000644 CBS domain BF28_2374 IPR002550 CNNM, transmembrane domain BF28_2374 IPR036318 FAD-binding, type PCMH-like superfamily BF28_2374 IPR016169 FAD-binding, type PCMH, subdomain 2 BF28_2374 IPR005170 Transporter-associated domain BF28_2376 IPR022930 Protein of unknown function UPF0316 BF28_2376 IPR019264 Domain of unknown function DUF2179 BF28_2380 IPR022855 Multidrug resistance protein MdtH BF28_2380 IPR036259 MFS transporter superfamily BF28_2380 IPR020846 Major facilitator superfamily domain BF28_2380 IPR011701 Major facilitator superfamily BF28_2382 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BF28_2382 IPR013216 Methyltransferase type 11 BF28_2386 IPR002549 Transmembrane protein TqsA-like BF28_2387 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal BF28_2387 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal BF28_2387 IPR026877 DXP reductoisomerase C-terminal domain BF28_2387 IPR036169 DXP reductoisomerase, C-terminal domain superfamily BF28_2387 IPR036291 NAD(P)-binding domain superfamily BF28_2387 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase BF28_2388 IPR002305 Aminoacyl-tRNA synthetase, class Ic BF28_2388 IPR036913 YegP-like superfamily BF28_2388 IPR024109 Tryptophan-tRNA ligase, bacterial-type BF28_2388 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BF28_2388 IPR002306 Tryptophan-tRNA ligase BF28_239 IPR019832 Manganese/iron superoxide dismutase, C-terminal BF28_239 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily BF28_239 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily BF28_239 IPR019831 Manganese/iron superoxide dismutase, N-terminal BF28_239 IPR001189 Manganese/iron superoxide dismutase BF28_239 IPR019833 Manganese/iron superoxide dismutase, binding site BF28_2390 IPR003593 AAA+ ATPase domain BF28_2390 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_2390 IPR025857 MacB-like periplasmic core domain BF28_2390 IPR017911 ABC transporter, macrolide export, ATP-binding domain BF28_2390 IPR017871 ABC transporter, conserved site BF28_2390 IPR003439 ABC transporter-like BF28_2390 IPR003838 ABC transporter permease protein domain BF28_2392 IPR011004 Trimeric LpxA-like superfamily BF28_2392 IPR024688 Maltose/galactoside acetyltransferase BF28_2392 IPR001451 Hexapeptide repeat BF28_2392 IPR018357 Hexapeptide transferase, conserved site BF28_2393 IPR036259 MFS transporter superfamily BF28_2393 IPR020846 Major facilitator superfamily domain BF28_2393 IPR011701 Major facilitator superfamily BF28_2394 IPR011701 Major facilitator superfamily BF28_2394 IPR020846 Major facilitator superfamily domain BF28_2394 IPR036259 MFS transporter superfamily BF28_2395 IPR004654 Glucokinase ROK BF28_2395 IPR000600 ROK family BF28_2396 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain BF28_2396 IPR037523 Vicinal oxygen chelate (VOC) domain BF28_2396 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BF28_2397 IPR023214 HAD superfamily BF28_2397 IPR020084 NUDIX hydrolase, conserved site BF28_2397 IPR015797 NUDIX hydrolase-like domain superfamily BF28_2397 IPR036412 HAD-like superfamily BF28_2397 IPR020476 NUDIX hydrolase BF28_2397 IPR000086 NUDIX hydrolase domain BF28_2397 IPR006357 HAD-superfamily hydrolase, subfamily IIA BF28_24 IPR020574 Ribosomal protein S9, conserved site BF28_24 IPR023035 Ribosomal protein S9, bacterial/plastid BF28_24 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BF28_24 IPR020568 Ribosomal protein S5 domain 2-type fold BF28_24 IPR000754 Ribosomal protein S9 BF28_240 IPR036119 Nitric oxide synthase, N-terminal domain superfamily BF28_240 IPR004030 Nitric oxide synthase, N-terminal BF28_240 IPR017142 Nitric oxide synthase, oxygenase subunit BF28_2403 IPR006439 HAD hydrolase, subfamily IA BF28_2403 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB BF28_2403 IPR041492 Haloacid dehalogenase-like hydrolase BF28_2403 IPR023214 HAD superfamily BF28_2403 IPR023198 Phosphoglycolate phosphatase-like, domain 2 BF28_2403 IPR036412 HAD-like superfamily BF28_2408 IPR017871 ABC transporter, conserved site BF28_2408 IPR003593 AAA+ ATPase domain BF28_2408 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_2408 IPR003439 ABC transporter-like BF28_241 IPR000060 BCCT transporter family BF28_2410 IPR036291 NAD(P)-binding domain superfamily BF28_2410 IPR020904 Short-chain dehydrogenase/reductase, conserved site BF28_2410 IPR002347 Short-chain dehydrogenase/reductase SDR BF28_2412 IPR001697 Pyruvate kinase BF28_2412 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily BF28_2412 IPR015793 Pyruvate kinase, barrel BF28_2412 IPR015795 Pyruvate kinase, C-terminal BF28_2412 IPR011037 Pyruvate kinase-like, insert domain superfamily BF28_2412 IPR015806 Pyruvate kinase, insert domain superfamily BF28_2412 IPR040442 Pyruvate kinase-like domain superfamily BF28_2412 IPR036637 Phosphohistidine domain superfamily BF28_2412 IPR008279 PEP-utilising enzyme, mobile domain BF28_2412 IPR036918 Pyruvate kinase, C-terminal domain superfamily BF28_2414 IPR029479 Nitroreductase BF28_2414 IPR000415 Nitroreductase-like BF28_2414 IPR033878 Nitroreductase NfsB-like BF28_2415 IPR036390 Winged helix DNA-binding domain superfamily BF28_2415 IPR002577 Helix-turn-helix, HxlR type BF28_2415 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_2417 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain BF28_2417 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit BF28_2417 IPR036621 Anticodon-binding domain superfamily BF28_2417 IPR006195 Aminoacyl-tRNA synthetase, class II BF28_2417 IPR004154 Anticodon-binding BF28_2417 IPR015807 Histidine-tRNA ligase BF28_2418 IPR000792 Transcription regulator LuxR, C-terminal BF28_2418 IPR001789 Signal transduction response regulator, receiver domain BF28_2418 IPR016032 Signal transduction response regulator, C-terminal effector BF28_2418 IPR011006 CheY-like superfamily BF28_2419 IPR001466 Beta-lactamase-related BF28_2419 IPR012338 Beta-lactamase/transpeptidase-like BF28_242 IPR020846 Major facilitator superfamily domain BF28_242 IPR005829 Sugar transporter, conserved site BF28_242 IPR036259 MFS transporter superfamily BF28_242 IPR011701 Major facilitator superfamily BF28_2420 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC BF28_2420 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily BF28_2420 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain BF28_2422 IPR010982 Lambda repressor-like, DNA-binding domain superfamily BF28_2422 IPR001387 Cro/C1-type helix-turn-helix domain BF28_2425 IPR000551 MerR-type HTH domain BF28_2425 IPR036244 TipA-like multidrug resistance regulator, antibiotic-recognition domain BF28_2425 IPR012925 TipAS antibiotic-recognition domain BF28_2425 IPR009061 Putative DNA-binding domain superfamily BF28_243 IPR029016 GAF-like domain superfamily BF28_243 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BF28_243 IPR005467 Histidine kinase domain BF28_243 IPR003594 Histidine kinase/HSP90-like ATPase BF28_243 IPR010559 Signal transduction histidine kinase, internal region BF28_243 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region BF28_243 IPR003018 GAF domain BF28_2430 IPR018385 C4-dicarboxylate anaerobic carrier-like BF28_2431 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily BF28_2431 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein BF28_2431 IPR010203 Regulator of ribonuclease activity A BF28_2434 IPR024919 ECF transporter transmembrane protein EcfT BF28_2434 IPR003339 ABC/ECF transporter, transmembrane component BF28_2435 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_2435 IPR017871 ABC transporter, conserved site BF28_2435 IPR003593 AAA+ ATPase domain BF28_2435 IPR003439 ABC transporter-like BF28_2437 IPR025576 YwiC-like protein BF28_244 IPR007492 LytTR DNA-binding domain BF28_244 IPR001789 Signal transduction response regulator, receiver domain BF28_244 IPR011006 CheY-like superfamily BF28_2441 IPR029039 Flavoprotein-like superfamily BF28_2441 IPR003680 Flavodoxin-like fold BF28_2443 IPR006161 Conserved hypothetical protein CHP00336 BF28_2443 IPR006160 Short chain fatty acid transporter AtoE BF28_2444 IPR035390 Thiol-activated cytolysin C-terminal BF28_2444 IPR038700 Thiol-activated cytolysin, C-terminal domain superfamily BF28_2444 IPR001869 Thiol-activated cytolysin BF28_2444 IPR036359 Thiol-activated cytolysin superfamily BF28_2444 IPR036363 Thiol-activated cytolysin, alpha-beta domain superfamily BF28_2447 IPR020846 Major facilitator superfamily domain BF28_2447 IPR011701 Major facilitator superfamily BF28_2447 IPR036259 MFS transporter superfamily BF28_2448 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_2448 IPR000835 MarR-type HTH domain BF28_2448 IPR036390 Winged helix DNA-binding domain superfamily BF28_2449 IPR029058 Alpha/Beta hydrolase fold BF28_2449 IPR000073 Alpha/beta hydrolase fold-1 BF28_2449 IPR000639 Epoxide hydrolase-like BF28_245 IPR023736 Antiholin-like protein LrgA BF28_245 IPR005538 LrgA/CidA family BF28_2450 IPR011701 Major facilitator superfamily BF28_2450 IPR036259 MFS transporter superfamily BF28_2450 IPR020846 Major facilitator superfamily domain BF28_2451 IPR025930 NETI protein BF28_2458 IPR020846 Major facilitator superfamily domain BF28_2458 IPR011701 Major facilitator superfamily BF28_2458 IPR036259 MFS transporter superfamily BF28_2459 IPR023772 DNA-binding HTH domain, TetR-type, conserved site BF28_2459 IPR009057 Homeobox-like domain superfamily BF28_2459 IPR001647 DNA-binding HTH domain, TetR-type BF28_2459 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily BF28_2459 IPR013572 Transcription regulator MAATS, C-terminal BF28_246 IPR007300 CidB/LrgB family BF28_246 IPR024891 Antiholin-like protein LrgB BF28_2461 IPR002502 N-acetylmuramoyl-L-alanine amidase domain BF28_2461 IPR018392 LysM domain BF28_2461 IPR036779 LysM domain superfamily BF28_2461 IPR002477 Peptidoglycan binding-like BF28_2461 IPR036365 PGBD-like superfamily BF28_2461 IPR036366 PGBD superfamily BF28_2461 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily BF28_2463 IPR023343 Penicillin amidase type, domain 1 BF28_2463 IPR002692 Penicillin/GL-7-ACA/AHL/aculeacin-A acylase BF28_2463 IPR014395 Penicillin/GL-7-ACA/AHL acylase BF28_2463 IPR029055 Nucleophile aminohydrolases, N-terminal BF28_2464 IPR029501 Bacterial EndoU nuclease BF28_2464 IPR006829 LXG domain BF28_2467 IPR002491 ABC transporter periplasmic binding domain BF28_2467 IPR018060 DNA binding HTH domain, AraC-type BF28_2467 IPR018062 HTH domain AraC-type, conserved site BF28_2467 IPR020449 Transcription regulator HTH, AraC- type BF28_2467 IPR009057 Homeobox-like domain superfamily BF28_2468 IPR011051 RmlC-like cupin domain superfamily BF28_2468 IPR019780 Germin, manganese binding site BF28_2468 IPR013096 Cupin 2, conserved barrel BF28_2468 IPR014710 RmlC-like jelly roll fold BF28_247 IPR002549 Transmembrane protein TqsA-like BF28_2471 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site BF28_2471 IPR014296 RNA polymerase sigma-M, bacillaceae BF28_2471 IPR013324 RNA polymerase sigma factor, region 3/4-like BF28_2471 IPR014284 RNA polymerase sigma-70 like domain BF28_2471 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_2471 IPR039425 RNA polymerase sigma-70 like BF28_2471 IPR013325 RNA polymerase sigma factor, region 2 BF28_2471 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 BF28_2471 IPR007627 RNA polymerase sigma-70 region 2 BF28_2474 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BF28_2474 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site BF28_2474 IPR015424 Pyridoxal phosphate-dependent transferase BF28_2474 IPR022278 Phosphoserine aminotransferase BF28_2474 IPR000192 Aminotransferase class V domain BF28_2474 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BF28_2475 IPR036291 NAD(P)-binding domain superfamily BF28_2475 IPR006236 D-3-phosphoglycerate dehydrogenase BF28_2475 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain BF28_2475 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 BF28_2475 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site BF28_2475 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BF28_2475 IPR029009 Allosteric substrate binding domain superfamily BF28_2475 IPR002912 ACT domain BF28_2478 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal BF28_2478 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily BF28_2478 IPR040449 LD-carboxypeptidase, N-terminal BF28_2478 IPR040921 LD-carboxypeptidase, C-terminal BF28_2478 IPR003507 Peptidase family S66 BF28_2478 IPR029062 Class I glutamine amidotransferase-like BF28_248 IPR011057 Mss4-like superfamily BF28_248 IPR002579 Peptide methionine sulphoxide reductase MrsB BF28_248 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily BF28_248 IPR002569 Peptide methionine sulphoxide reductase MsrA BF28_248 IPR028427 Peptide methionine sulfoxide reductase BF28_2483 IPR005119 LysR, substrate-binding BF28_2483 IPR000847 Transcription regulator HTH, LysR BF28_2483 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_2483 IPR036390 Winged helix DNA-binding domain superfamily BF28_2484 IPR004017 Cysteine-rich domain BF28_2484 IPR022822 Lactate utilization protein A BF28_2485 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily BF28_2485 IPR037171 NagB/RpiA transferase-like BF28_2485 IPR022825 Lactate utilization protein B BF28_2485 IPR003741 LUD domain BF28_2485 IPR009051 Alpha-helical ferredoxin BF28_2485 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BF28_2485 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BF28_2485 IPR024569 4Fe-4S binding protein, C-terminal BF28_2485 IPR004452 4Fe-4S binding protein BF28_2486 IPR022823 Lactate utilization protein C BF28_2486 IPR037171 NagB/RpiA transferase-like BF28_2486 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily BF28_2486 IPR003741 LUD domain BF28_2487 IPR011701 Major facilitator superfamily BF28_2487 IPR000849 Sugar phosphate transporter BF28_2487 IPR036259 MFS transporter superfamily BF28_2487 IPR020846 Major facilitator superfamily domain BF28_2488 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal BF28_2488 IPR003740 Uncharacterised membrane protein YitT BF28_2488 IPR019264 Domain of unknown function DUF2179 BF28_2489 IPR012349 FMN-binding split barrel BF28_2489 IPR007396 Transcriptional regulator PAI 2-type BF28_249 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BF28_249 IPR001036 Acriflavin resistance protein BF28_2490 IPR000182 GNAT domain BF28_2490 IPR016181 Acyl-CoA N-acyltransferase BF28_2491 IPR023187 Transcriptional regulator MarR-type, conserved site BF28_2491 IPR000835 MarR-type HTH domain BF28_2491 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_2491 IPR036390 Winged helix DNA-binding domain superfamily BF28_2492 IPR038750 Uncharacterized protein YczE/YyaS-like BF28_2493 IPR011006 CheY-like superfamily BF28_2493 IPR039420 Transcriptional regulatory protein WalR-like BF28_2493 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_2493 IPR001789 Signal transduction response regulator, receiver domain BF28_2493 IPR001867 OmpR/PhoB-type DNA-binding domain BF28_2494 IPR003594 Histidine kinase/HSP90-like ATPase BF28_2494 IPR003660 HAMP domain BF28_2494 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BF28_2494 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BF28_2494 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BF28_2494 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BF28_2494 IPR005467 Histidine kinase domain BF28_2497 IPR003838 ABC transporter permease protein domain BF28_2498 IPR003439 ABC transporter-like BF28_2498 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_2498 IPR003593 AAA+ ATPase domain BF28_25 IPR005823 Ribosomal protein L13, bacterial-type BF28_25 IPR005822 Ribosomal protein L13 BF28_25 IPR036899 Ribosomal protein L13 superfamily BF28_25 IPR023563 Ribosomal protein L13, conserved site BF28_250 IPR023772 DNA-binding HTH domain, TetR-type, conserved site BF28_250 IPR009057 Homeobox-like domain superfamily BF28_250 IPR001647 DNA-binding HTH domain, TetR-type BF28_2501 IPR011610 S-adenosyl-L-methionine-dependent methyltransferase, putative BF28_2501 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BF28_2501 IPR016874 Tetracenomycin polyketide synthesis O-methyltransferase TcmP BF28_2501 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp BF28_2502 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BF28_2502 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 BF28_2502 IPR016039 Thiolase-like BF28_2502 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal BF28_2504 IPR036291 NAD(P)-binding domain superfamily BF28_2504 IPR002225 3-beta hydroxysteroid dehydrogenase/isomerase BF28_2505 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BF28_2505 IPR001279 Metallo-beta-lactamase BF28_2508 IPR001387 Cro/C1-type helix-turn-helix domain BF28_2508 IPR010982 Lambda repressor-like, DNA-binding domain superfamily BF28_251 IPR029044 Nucleotide-diphospho-sugar transferases BF28_251 IPR001173 Glycosyltransferase 2-like BF28_2510 IPR001466 Beta-lactamase-related BF28_2510 IPR001586 Beta-lactamase, class-C active site BF28_2510 IPR012338 Beta-lactamase/transpeptidase-like BF28_2512 IPR005966 D-cysteine desulfhydrase BF28_2512 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase BF28_2512 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme BF28_2512 IPR001926 Pyridoxal-phosphate dependent enzyme BF28_2517 IPR001123 Amino acid exporter protein, LeuE-type BF28_2521 IPR011701 Major facilitator superfamily BF28_2521 IPR036259 MFS transporter superfamily BF28_2521 IPR004638 Drug resistance transporter EmrB-like BF28_2521 IPR020846 Major facilitator superfamily domain BF28_2522 IPR023206 Bifunctional cytochrome P450/NADPH--cytochrome P450 reductase BF28_2522 IPR001094 Flavodoxin-like BF28_2522 IPR008254 Flavodoxin/nitric oxide synthase BF28_2522 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase BF28_2522 IPR017927 FAD-binding domain, ferredoxin reductase-type BF28_2522 IPR036396 Cytochrome P450 superfamily BF28_2522 IPR017972 Cytochrome P450, conserved site BF28_2522 IPR001128 Cytochrome P450 BF28_2522 IPR029039 Flavoprotein-like superfamily BF28_2522 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily BF28_2522 IPR001433 Oxidoreductase FAD/NAD(P)-binding BF28_2522 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain BF28_2522 IPR017938 Riboflavin synthase-like beta-barrel BF28_2522 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding BF28_2523 IPR036390 Winged helix DNA-binding domain superfamily BF28_2523 IPR023187 Transcriptional regulator MarR-type, conserved site BF28_2523 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_2523 IPR000835 MarR-type HTH domain BF28_2527 IPR012338 Beta-lactamase/transpeptidase-like BF28_2527 IPR001466 Beta-lactamase-related BF28_2529 IPR018062 HTH domain AraC-type, conserved site BF28_2529 IPR016220 Methylphosphotriester-DNA alkyltransferase, AdaA BF28_2529 IPR009057 Homeobox-like domain superfamily BF28_2529 IPR035451 Ada-like domain superfamily BF28_2529 IPR004026 Ada DNA repair, metal-binding BF28_2529 IPR018060 DNA binding HTH domain, AraC-type BF28_2531 IPR012337 Ribonuclease H-like superfamily BF28_2531 IPR002559 Transposase, IS4-like BF28_2533 IPR037523 Vicinal oxygen chelate (VOC) domain BF28_2533 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain BF28_2533 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BF28_2533 IPR018146 Glyoxalase I, conserved site BF28_2537 IPR036291 NAD(P)-binding domain superfamily BF28_2537 IPR002347 Short-chain dehydrogenase/reductase SDR BF28_2537 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase BF28_2539 IPR013126 Heat shock protein 70 family BF28_2539 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily BF28_2539 IPR042030 Chaperone protein HscC, nucleotide-binding domain BF28_2539 IPR018181 Heat shock protein 70, conserved site BF28_2543 IPR001845 HTH ArsR-type DNA-binding domain BF28_2543 IPR018334 ArsR-type transcription regulator, HTH motif BF28_2543 IPR036390 Winged helix DNA-binding domain superfamily BF28_2543 IPR011991 ArsR-like helix-turn-helix domain BF28_2543 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_2544 IPR037523 Vicinal oxygen chelate (VOC) domain BF28_2544 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain BF28_2544 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BF28_2545 IPR004706 Arsenical-resistance protein Acr3 BF28_2545 IPR038770 Sodium/solute symporter superfamily BF28_2545 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 BF28_2546 IPR036196 Phosphotyrosine protein phosphatase I superfamily BF28_2546 IPR014064 Arsenate reductase ArsC BF28_2546 IPR023485 Phosphotyrosine protein phosphatase I BF28_2549 IPR011006 CheY-like superfamily BF28_2549 IPR016032 Signal transduction response regulator, C-terminal effector BF28_2549 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_2549 IPR012052 Sporulation transcription factor Spo0A BF28_2549 IPR014879 Sporulation initiation factor Spo0A, C-terminal BF28_2549 IPR001789 Signal transduction response regulator, receiver domain BF28_255 IPR032781 ABC-transporter extension domain BF28_255 IPR003593 AAA+ ATPase domain BF28_255 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_255 IPR017871 ABC transporter, conserved site BF28_255 IPR003439 ABC transporter-like BF28_2551 IPR027022 ABC transporter permease protein, BceB-type BF28_2551 IPR003838 ABC transporter permease protein domain BF28_2552 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_2552 IPR003439 ABC transporter-like BF28_2552 IPR003593 AAA+ ATPase domain BF28_2553 IPR024542 Domain of unknown function DUF3880 BF28_2554 IPR000073 Alpha/beta hydrolase fold-1 BF28_2554 IPR029058 Alpha/Beta hydrolase fold BF28_2554 IPR019913 Pyrimidine utilisation protein RutD BF28_2559 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase BF28_2559 IPR000537 UbiA prenyltransferase family BF28_2559 IPR026046 UbiA prenyltransferase domain containing protein 1 BF28_256 IPR029044 Nucleotide-diphospho-sugar transferases BF28_256 IPR001173 Glycosyltransferase 2-like BF28_2561 IPR001736 Phospholipase D/Transphosphatidylase BF28_2561 IPR025202 Phospholipase D-like domain BF28_2561 IPR022924 Cardiolipin synthase BF28_2564 IPR036101 CarD-like/TRCF domain superfamily BF28_2564 IPR003711 CarD-like/TRCF domain BF28_2564 IPR042215 CarD-like, C-terminal domain BF28_2567 IPR020139 Protein of unknown function DUF2642 BF28_2569 IPR018745 Domain of unknown function DUF2294 BF28_2570 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal BF28_2570 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit BF28_2571 IPR018752 Uncharacterised protein family UPF0753 BF28_2572 IPR036874 Carbonic anhydrase superfamily BF28_2575 IPR025889 General stress protein 17M-like domain BF28_2578 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB BF28_2579 IPR011614 Catalase core domain BF28_2579 IPR024708 Catalase active site BF28_2579 IPR037060 Catalase core domain superfamily BF28_2579 IPR002226 Catalase haem-binding site BF28_2579 IPR010582 Catalase immune-responsive domain BF28_2579 IPR020835 Catalase superfamily BF28_2579 IPR018028 Catalase, mono-functional, haem-containing BF28_2579 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 BF28_258 IPR029069 HotDog domain superfamily BF28_258 IPR040170 Cytosolic acyl coenzyme A thioester hydrolase BF28_258 IPR033120 Hotdog acyl-CoA thioesterase (ACOT)-type domain BF28_258 IPR006683 Thioesterase domain BF28_2580 IPR006146 5'-Nucleotidase, conserved site BF28_2580 IPR006179 5'-Nucleotidase/apyrase BF28_2580 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type BF28_2580 IPR036907 5'-Nucleotidase, C-terminal domain superfamily BF28_2580 IPR029052 Metallo-dependent phosphatase-like BF28_2580 IPR008334 5'-Nucleotidase, C-terminal BF28_2580 IPR041498 Bacterial Ig domain BF28_2581 IPR002293 Amino acid/polyamine transporter I BF28_2582 IPR002528 Multi antimicrobial extrusion protein BF28_2583 IPR006076 FAD dependent oxidoreductase BF28_2583 IPR017941 Rieske [2Fe-2S] iron-sulphur domain BF28_2583 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily BF28_2583 IPR005805 Rieske iron-sulphur protein, C-terminal BF28_2583 IPR038010 YhfW, C-terminal Rieske domain BF28_2583 IPR036188 FAD/NAD(P)-binding domain superfamily BF28_2584 IPR001466 Beta-lactamase-related BF28_2584 IPR012338 Beta-lactamase/transpeptidase-like BF28_2586 IPR001463 Sodium:alanine symporter BF28_2588 IPR015868 Glutaminase BF28_2588 IPR012338 Beta-lactamase/transpeptidase-like BF28_2589 IPR003594 Histidine kinase/HSP90-like ATPase BF28_2589 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BF28_2589 IPR005467 Histidine kinase domain BF28_2589 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BF28_2590 IPR011006 CheY-like superfamily BF28_2590 IPR001789 Signal transduction response regulator, receiver domain BF28_2590 IPR013972 YcbB domain BF28_2591 IPR004995 Bacillus/Clostridium Ger spore germination protein BF28_2592 IPR004761 Spore germination GerAB BF28_2593 IPR008844 Spore germination GerAC BF28_2593 IPR038501 Spore germination GerAC superfamily BF28_2594 IPR036291 NAD(P)-binding domain superfamily BF28_2594 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal BF28_2594 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain BF28_2594 IPR000304 Pyrroline-5-carboxylate reductase BF28_2594 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily BF28_2595 IPR002293 Amino acid/polyamine transporter I BF28_2596 IPR001162 UvrC family homology region BF28_2596 IPR035901 GIY-YIG endonuclease superfamily BF28_2596 IPR041663 DisA/LigA, helix-hairpin-helix motif BF28_2596 IPR000305 GIY-YIG endonuclease BF28_2596 IPR010994 RuvA domain 2-like BF28_2596 IPR036876 UVR domain superfamily BF28_2596 IPR038476 UvrC homology region 2 superfamily BF28_2596 IPR001943 UVR domain BF28_2596 IPR004791 UvrABC system, subunit C BF28_2597 IPR001584 Integrase, catalytic core BF28_2597 IPR012337 Ribonuclease H-like superfamily BF28_2597 IPR038965 Transposase InsF-like BF28_2597 IPR036397 Ribonuclease H superfamily BF28_2598 IPR001387 Cro/C1-type helix-turn-helix domain BF28_2598 IPR010982 Lambda repressor-like, DNA-binding domain superfamily BF28_2599 IPR041725 Type I (cytosolic) L-asparaginase BF28_2599 IPR027474 L-asparaginase, N-terminal BF28_2599 IPR037152 L-asparaginase, N-terminal domain superfamily BF28_2599 IPR006033 Type I L-asparaginase family BF28_2599 IPR036152 Asparaginase/glutaminase-like superfamily BF28_2599 IPR027475 Asparaginase/glutaminase, active site 2 BF28_2599 IPR027473 L-asparaginase, C-terminal BF28_2599 IPR040919 Asparaginase/glutaminase, C-terminal BF28_2599 IPR006034 Asparaginase/glutaminase-like BF28_2599 IPR020827 Asparaginase/glutaminase, active site 1 BF28_26 IPR001406 Pseudouridine synthase I, TruA BF28_26 IPR020103 Pseudouridine synthase, catalytic domain superfamily BF28_26 IPR020095 Pseudouridine synthase I, TruA, C-terminal BF28_26 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain BF28_260 IPR012292 Globin/Protoglobin BF28_260 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain BF28_260 IPR039379 Protoglobin, globin sensor domain BF28_260 IPR009050 Globin-like superfamily BF28_2600 IPR008948 L-Aspartase-like BF28_2600 IPR018951 Fumarase C, C-terminal BF28_2600 IPR000362 Fumarate lyase family BF28_2600 IPR022761 Fumarate lyase, N-terminal BF28_2600 IPR020557 Fumarate lyase, conserved site BF28_2600 IPR024083 Fumarase/histidase, N-terminal BF28_2600 IPR004708 Aspartate ammonia-lyase BF28_2602 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_2602 IPR003593 AAA+ ATPase domain BF28_2602 IPR003439 ABC transporter-like BF28_2605 IPR000551 MerR-type HTH domain BF28_2605 IPR036244 TipA-like multidrug resistance regulator, antibiotic-recognition domain BF28_2605 IPR012925 TipAS antibiotic-recognition domain BF28_2605 IPR009061 Putative DNA-binding domain superfamily BF28_2607 IPR027399 Alcohol dehydrogenase GroES-associated BF28_2607 IPR013154 Alcohol dehydrogenase, N-terminal BF28_2607 IPR013149 Alcohol dehydrogenase, C-terminal BF28_2607 IPR011032 GroES-like superfamily BF28_2607 IPR036291 NAD(P)-binding domain superfamily BF28_2607 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site BF28_2608 IPR038300 SASP, alpha/beta-type superfamily BF28_2608 IPR001448 Small acid-soluble spore protein, alpha/beta-type BF28_2608 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site BF28_2609 IPR012347 Ferritin-like BF28_2609 IPR021617 Protein of unknown function DUF3231 BF28_261 IPR005115 Uncharacterised domain UPF0126 BF28_2610 IPR019649 Protein of unknown function DUF2512 BF28_2611 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site BF28_2611 IPR001448 Small acid-soluble spore protein, alpha/beta-type BF28_2611 IPR038300 SASP, alpha/beta-type superfamily BF28_2613 IPR004841 Amino acid permease/ SLC12A domain BF28_2614 IPR001123 Amino acid exporter protein, LeuE-type BF28_2615 IPR014988 Uncharacterised protein family, YqcI/YcgG BF28_2617 IPR016493 Spore coat protein CotF BF28_2617 IPR012851 Spore coat protein CotF-like BF28_2620 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BF28_2620 IPR001279 Metallo-beta-lactamase BF28_2622 IPR013815 ATP-grasp fold, subdomain 1 BF28_2622 IPR008279 PEP-utilising enzyme, mobile domain BF28_2622 IPR036637 Phosphohistidine domain superfamily BF28_2622 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding BF28_2623 IPR001647 DNA-binding HTH domain, TetR-type BF28_2623 IPR023772 DNA-binding HTH domain, TetR-type, conserved site BF28_2623 IPR009057 Homeobox-like domain superfamily BF28_2631 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal BF28_2631 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily BF28_2631 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain BF28_2631 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily BF28_2631 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain BF28_2631 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal BF28_2633 IPR036390 Winged helix DNA-binding domain superfamily BF28_2633 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_2633 IPR001845 HTH ArsR-type DNA-binding domain BF28_2633 IPR011991 ArsR-like helix-turn-helix domain BF28_2634 IPR010897 Sporulation stage II, protein P BF28_2636 IPR005627 Copper homeostasis protein CutC BF28_2636 IPR036822 Copper homeostasis (CutC) domain superfamily BF28_2636 IPR023648 Copper homeostasis CutC domain BF28_2637 IPR019756 Peptidase S26A, signal peptidase I, serine active site BF28_2637 IPR019758 Peptidase S26A, signal peptidase I, conserved site BF28_2637 IPR036286 LexA/Signal peptidase-like superfamily BF28_2637 IPR000223 Peptidase S26A, signal peptidase I BF28_2637 IPR019757 Peptidase S26A, signal peptidase I, lysine active site BF28_2637 IPR019533 Peptidase S26 BF28_2638 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_2638 IPR005471 Transcription regulator IclR, N-terminal BF28_2638 IPR029016 GAF-like domain superfamily BF28_2638 IPR036390 Winged helix DNA-binding domain superfamily BF28_2638 IPR014757 Transcription regulator IclR, C-terminal BF28_2639 IPR010016 KipI family BF28_2639 IPR003833 Carboxyltransferase domain, subdomain C and D BF28_2639 IPR029000 Cyclophilin-like domain superfamily BF28_264 IPR004629 Glycosyl transferase WecB/TagA/CpsF BF28_264 IPR034714 N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase BF28_2640 IPR003778 Carboxyltransferase domain, subdomain A and B BF28_2640 IPR029000 Cyclophilin-like domain superfamily BF28_2641 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel BF28_2641 IPR005501 LamB/YcsF/PxpA-like BF28_2644 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like BF28_2644 IPR033693 Pyroglutamyl peptidase I, Glu active site BF28_2644 IPR000816 Peptidase C15, pyroglutamyl peptidase I BF28_2644 IPR029762 Pyroglutamyl peptidase I, bacterial-type BF28_2644 IPR036440 Peptidase C15, pyroglutamyl peptidase I-like superfamily BF28_2644 IPR033694 Pyroglutamyl peptidase I, Cys active site BF28_2645 IPR029035 DHS-like NAD/FAD-binding domain superfamily BF28_2645 IPR003000 Sirtuin family BF28_2645 IPR026591 Sirtuin, catalytic core small domain superfamily BF28_2645 IPR028628 Sirtuin, class U BF28_2645 IPR026590 Sirtuin family, catalytic core domain BF28_2648 IPR000223 Peptidase S26A, signal peptidase I BF28_2648 IPR036286 LexA/Signal peptidase-like superfamily BF28_2648 IPR019758 Peptidase S26A, signal peptidase I, conserved site BF28_2648 IPR019757 Peptidase S26A, signal peptidase I, lysine active site BF28_2648 IPR019756 Peptidase S26A, signal peptidase I, serine active site BF28_2648 IPR019533 Peptidase S26 BF28_265 IPR020846 Major facilitator superfamily domain BF28_265 IPR005829 Sugar transporter, conserved site BF28_265 IPR036259 MFS transporter superfamily BF28_265 IPR011701 Major facilitator superfamily BF28_2650 IPR015797 NUDIX hydrolase-like domain superfamily BF28_2650 IPR020476 NUDIX hydrolase BF28_2650 IPR000086 NUDIX hydrolase domain BF28_2650 IPR020084 NUDIX hydrolase, conserved site BF28_2650 IPR003561 Mutator MutT BF28_2652 IPR015358 Transcription regulator MerR, DNA binding BF28_2652 IPR011789 Cu(I)-responsive transcriptional regulator BF28_2652 IPR000551 MerR-type HTH domain BF28_2652 IPR009061 Putative DNA-binding domain superfamily BF28_2653 IPR016024 Armadillo-type fold BF28_2653 IPR014825 DNA alkylation repair enzyme BF28_2653 IPR021133 HEAT, type 2 BF28_2655 IPR004841 Amino acid permease/ SLC12A domain BF28_2655 IPR004840 Amino acid permease, conserved site BF28_2656 IPR016181 Acyl-CoA N-acyltransferase BF28_2656 IPR000182 GNAT domain BF28_2657 IPR002781 Transmembrane protein TauE-like BF28_266 IPR011006 CheY-like superfamily BF28_266 IPR007492 LytTR DNA-binding domain BF28_266 IPR001789 Signal transduction response regulator, receiver domain BF28_2663 IPR029058 Alpha/Beta hydrolase fold BF28_2663 IPR000073 Alpha/beta hydrolase fold-1 BF28_2664 IPR001867 OmpR/PhoB-type DNA-binding domain BF28_2664 IPR016032 Signal transduction response regulator, C-terminal effector BF28_2664 IPR001789 Signal transduction response regulator, receiver domain BF28_2664 IPR039420 Transcriptional regulatory protein WalR-like BF28_2664 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_2664 IPR011006 CheY-like superfamily BF28_2665 IPR003660 HAMP domain BF28_2665 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BF28_2665 IPR005467 Histidine kinase domain BF28_2665 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BF28_2665 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BF28_2666 IPR024997 Protein of unknown function DUF3892 BF28_2667 IPR003791 Protein of unknown function UPF0178 BF28_2668 IPR036390 Winged helix DNA-binding domain superfamily BF28_2668 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_2668 IPR000524 Transcription regulator HTH, GntR BF28_2668 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BF28_2668 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BF28_2668 IPR015424 Pyridoxal phosphate-dependent transferase BF28_2668 IPR004839 Aminotransferase, class I/classII BF28_2669 IPR000620 EamA domain BF28_267 IPR003706 CstA, N-terminal domain BF28_267 IPR025299 CstA, C-terminal domain BF28_2672 IPR000182 GNAT domain BF28_2672 IPR016181 Acyl-CoA N-acyltransferase BF28_2672 IPR017255 Acetyltransferase, GNAT, predicted BF28_2673 IPR008979 Galactose-binding-like domain superfamily BF28_2673 IPR009057 Homeobox-like domain superfamily BF28_2673 IPR018060 DNA binding HTH domain, AraC-type BF28_2678 IPR003593 AAA+ ATPase domain BF28_2678 IPR003439 ABC transporter-like BF28_2678 IPR017871 ABC transporter, conserved site BF28_2678 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_2679 IPR016040 NAD(P)-binding domain BF28_2679 IPR036291 NAD(P)-binding domain superfamily BF28_268 IPR007423 Selenoprotein, putative BF28_2680 IPR036390 Winged helix DNA-binding domain superfamily BF28_2680 IPR000524 Transcription regulator HTH, GntR BF28_2680 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_2681 IPR003593 AAA+ ATPase domain BF28_2681 IPR003439 ABC transporter-like BF28_2681 IPR017871 ABC transporter, conserved site BF28_2681 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_2684 IPR000086 NUDIX hydrolase domain BF28_2684 IPR015797 NUDIX hydrolase-like domain superfamily BF28_2684 IPR020476 NUDIX hydrolase BF28_2684 IPR003561 Mutator MutT BF28_2684 IPR020084 NUDIX hydrolase, conserved site BF28_2686 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BF28_2686 IPR041095 Elongation Factor G, domain II BF28_2686 IPR035650 Tetracycline resistance protein, C-terminal BF28_2686 IPR035647 EF-G domain III/V-like BF28_2686 IPR020568 Ribosomal protein S5 domain 2-type fold BF28_2686 IPR009000 Translation protein, beta-barrel domain superfamily BF28_2686 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_2686 IPR031157 Tr-type G domain, conserved site BF28_2686 IPR005517 Translation elongation factor EFG/EF2, domain IV BF28_2686 IPR000640 Elongation factor EFG, domain V-like BF28_2686 IPR000795 Transcription factor, GTP-binding domain BF28_2686 IPR005225 Small GTP-binding protein domain BF28_2687 IPR011991 ArsR-like helix-turn-helix domain BF28_2687 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_2687 IPR000835 MarR-type HTH domain BF28_2687 IPR001845 HTH ArsR-type DNA-binding domain BF28_2687 IPR036390 Winged helix DNA-binding domain superfamily BF28_2688 IPR029479 Nitroreductase BF28_2688 IPR000415 Nitroreductase-like BF28_269 IPR000160 GGDEF domain BF28_269 IPR029787 Nucleotide cyclase BF28_269 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region BF28_2690 IPR011703 ATPase, AAA-3 BF28_2690 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_2690 IPR041628 ChlI/MoxR, AAA lid domain BF28_2694 IPR012338 Beta-lactamase/transpeptidase-like BF28_2694 IPR001466 Beta-lactamase-related BF28_2696 IPR001123 Amino acid exporter protein, LeuE-type BF28_2698 IPR026912 Adenine deaminase C-terminal domain BF28_2698 IPR011059 Metal-dependent hydrolase, composite domain superfamily BF28_2698 IPR032466 Metal-dependent hydrolase BF28_2698 IPR006680 Amidohydrolase-related BF28_2699 IPR036390 Winged helix DNA-binding domain superfamily BF28_2699 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_2699 IPR000835 MarR-type HTH domain BF28_27 IPR003339 ABC/ECF transporter, transmembrane component BF28_27 IPR024919 ECF transporter transmembrane protein EcfT BF28_270 IPR029056 Ribokinase-like BF28_270 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase BF28_270 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase BF28_2702 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_2702 IPR015859 ABC transporter, taurine import, TauD BF28_2702 IPR003439 ABC transporter-like BF28_2702 IPR017871 ABC transporter, conserved site BF28_2702 IPR003593 AAA+ ATPase domain BF28_2703 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BF28_2703 IPR035906 MetI-like superfamily BF28_2704 IPR010582 Catalase immune-responsive domain BF28_2704 IPR002226 Catalase haem-binding site BF28_2704 IPR020835 Catalase superfamily BF28_2704 IPR037060 Catalase core domain superfamily BF28_2704 IPR040333 Catalase, clade 3 BF28_2704 IPR011614 Catalase core domain BF28_2704 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 BF28_2704 IPR024708 Catalase active site BF28_2704 IPR018028 Catalase, mono-functional, haem-containing BF28_2705 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BF28_2705 IPR005814 Aminotransferase class-III BF28_2705 IPR004636 Acetylornithine/Succinylornithine transaminase family BF28_2705 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BF28_2705 IPR015424 Pyridoxal phosphate-dependent transferase BF28_2707 IPR022857 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase BF28_2707 IPR001173 Glycosyltransferase 2-like BF28_2707 IPR029044 Nucleotide-diphospho-sugar transferases BF28_2708 IPR029044 Nucleotide-diphospho-sugar transferases BF28_2708 IPR001173 Glycosyltransferase 2-like BF28_271 IPR029016 GAF-like domain superfamily BF28_271 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain BF28_271 IPR003594 Histidine kinase/HSP90-like ATPase BF28_271 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BF28_271 IPR003018 GAF domain BF28_2711 IPR001173 Glycosyltransferase 2-like BF28_2711 IPR029044 Nucleotide-diphospho-sugar transferases BF28_2711 IPR022857 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase BF28_2713 IPR005829 Sugar transporter, conserved site BF28_2713 IPR011701 Major facilitator superfamily BF28_2713 IPR036259 MFS transporter superfamily BF28_2713 IPR020846 Major facilitator superfamily domain BF28_2716 IPR041628 ChlI/MoxR, AAA lid domain BF28_2716 IPR011703 ATPase, AAA-3 BF28_2716 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_272 IPR011006 CheY-like superfamily BF28_272 IPR016032 Signal transduction response regulator, C-terminal effector BF28_272 IPR001789 Signal transduction response regulator, receiver domain BF28_272 IPR000792 Transcription regulator LuxR, C-terminal BF28_2721 IPR025870 Glyoxalase-like domain BF28_2721 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BF28_2721 IPR037523 Vicinal oxygen chelate (VOC) domain BF28_2722 IPR000182 GNAT domain BF28_2722 IPR016181 Acyl-CoA N-acyltransferase BF28_2726 IPR011006 CheY-like superfamily BF28_2726 IPR007492 LytTR DNA-binding domain BF28_2726 IPR001789 Signal transduction response regulator, receiver domain BF28_2728 IPR011397 Intramembrane metalloprotease YhfC BF28_273 IPR023048 NADH-azoreductase, FMN-dependent BF28_273 IPR029039 Flavoprotein-like superfamily BF28_273 IPR003680 Flavodoxin-like fold BF28_2731 IPR001387 Cro/C1-type helix-turn-helix domain BF28_2731 IPR010982 Lambda repressor-like, DNA-binding domain superfamily BF28_2732 IPR021354 Protein of unknown function DUF2975 BF28_2733 IPR018299 Alkaline phosphatase, active site BF28_2733 IPR017850 Alkaline-phosphatase-like, core domain superfamily BF28_2733 IPR001952 Alkaline phosphatase BF28_2734 IPR005804 Fatty acid desaturase domain BF28_2735 IPR036025 tRNA-splicing ligase RtcB-like superfamily BF28_2735 IPR001233 tRNA-splicing ligase, RtcB BF28_2736 IPR004840 Amino acid permease, conserved site BF28_2736 IPR004841 Amino acid permease/ SLC12A domain BF28_2737 IPR036390 Winged helix DNA-binding domain superfamily BF28_2737 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_2737 IPR005471 Transcription regulator IclR, N-terminal BF28_2737 IPR014757 Transcription regulator IclR, C-terminal BF28_2737 IPR029016 GAF-like domain superfamily BF28_2738 IPR002933 Peptidase M20 BF28_2738 IPR012166 Uncharacterised protein family RocB BF28_2739 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal BF28_2739 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily BF28_2739 IPR000304 Pyrroline-5-carboxylate reductase BF28_2739 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain BF28_2739 IPR036291 NAD(P)-binding domain superfamily BF28_274 IPR018490 Cyclic nucleotide-binding-like BF28_274 IPR012318 Crp-type HTH domain BF28_274 IPR000595 Cyclic nucleotide-binding domain BF28_2740 IPR036393 Acetylglutamate kinase-like superfamily BF28_2740 IPR001048 Aspartate/glutamate/uridylate kinase BF28_2740 IPR041739 Glutamate-5-kinase domain BF28_2740 IPR001057 Glutamate/acetylglutamate kinase BF28_2740 IPR011529 Glutamate 5-kinase BF28_2740 IPR019797 Glutamate 5-kinase, conserved site BF28_2740 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase BF28_2740 IPR015947 PUA-like superfamily BF28_2740 IPR036974 PUA domain superfamily BF28_2740 IPR002478 PUA domain BF28_2741 IPR000965 GPR domain BF28_2741 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site BF28_2741 IPR015590 Aldehyde dehydrogenase domain BF28_2741 IPR012134 Glutamate-5-semialdehyde dehydrogenase BF28_2741 IPR016163 Aldehyde dehydrogenase, C-terminal BF28_2741 IPR016161 Aldehyde/histidinol dehydrogenase BF28_2741 IPR016162 Aldehyde dehydrogenase, N-terminal BF28_2742 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial BF28_2742 IPR002668 Concentrative nucleoside transporter N-terminal domain BF28_2742 IPR011657 Concentrative nucleoside transporter C-terminal domain BF28_2742 IPR008276 Concentrative nucleoside transporter BF28_2746 IPR011008 Dimeric alpha-beta barrel BF28_2746 IPR007138 Antibiotic biosynthesis monooxygenase domain BF28_275 IPR006439 HAD hydrolase, subfamily IA BF28_275 IPR036412 HAD-like superfamily BF28_275 IPR023198 Phosphoglycolate phosphatase-like, domain 2 BF28_275 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB BF28_275 IPR023214 HAD superfamily BF28_275 IPR041492 Haloacid dehalogenase-like hydrolase BF28_2752 IPR041720 Aldolase FbaB-like, archaeal-type BF28_2752 IPR002915 DeoC/FbaB/ lacD aldolase BF28_2752 IPR033673 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase BF28_2752 IPR013785 Aldolase-type TIM barrel BF28_2754 IPR033676 Autoinducer-2 kinase BF28_2754 IPR000577 Carbohydrate kinase, FGGY BF28_2754 IPR018485 Carbohydrate kinase, FGGY, C-terminal BF28_2754 IPR018484 Carbohydrate kinase, FGGY, N-terminal BF28_2755 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_2755 IPR007324 Sugar-binding domain, putative BF28_2755 IPR037171 NagB/RpiA transferase-like BF28_2755 IPR012318 Crp-type HTH domain BF28_2756 IPR003593 AAA+ ATPase domain BF28_2756 IPR003439 ABC transporter-like BF28_2756 IPR017871 ABC transporter, conserved site BF28_2756 IPR030281 Autoinducer 2 import ATP-binding protein LsrA BF28_2756 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_2757 IPR001851 ABC transporter, permease BF28_2758 IPR001851 ABC transporter, permease BF28_2759 IPR030159 Autoinducer 2 ABC transporter, substrate-binding protein LsrB BF28_2759 IPR028082 Periplasmic binding protein-like I BF28_2759 IPR025997 Periplasmic binding protein BF28_276 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase BF28_276 IPR015424 Pyridoxal phosphate-dependent transferase BF28_276 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BF28_276 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BF28_276 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme BF28_2760 IPR006231 Malate:quinone-oxidoreductase BF28_2760 IPR036188 FAD/NAD(P)-binding domain superfamily BF28_2764 IPR000014 PAS domain BF28_2764 IPR035965 PAS domain superfamily BF28_2764 IPR003593 AAA+ ATPase domain BF28_2764 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_2764 IPR025944 Sigma-54 interaction domain, conserved site BF28_2764 IPR002078 RNA polymerase sigma factor 54 interaction domain BF28_2764 IPR029016 GAF-like domain superfamily BF28_2764 IPR002197 DNA binding HTH domain, Fis-type BF28_2764 IPR009057 Homeobox-like domain superfamily BF28_2764 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 BF28_2764 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 BF28_2765 IPR042099 AMP-dependent synthetase-like superfamily BF28_2765 IPR000873 AMP-dependent synthetase/ligase BF28_2765 IPR023456 Crotonobetaine/carnitine-CoA ligase CaiC BF28_2765 IPR020845 AMP-binding, conserved site BF28_2765 IPR025110 AMP-binding enzyme, C-terminal domain BF28_2766 IPR001753 Enoyl-CoA hydratase/isomerase BF28_2766 IPR029045 ClpP/crotonase-like domain superfamily BF28_2766 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site BF28_2766 IPR014748 Enoyl-CoA hydratase, C-terminal BF28_2767 IPR003474 Gluconate transporter BF28_2769 IPR018392 LysM domain BF28_2769 IPR036779 LysM domain superfamily BF28_2769 IPR036908 RlpA-like domain superfamily BF28_2769 IPR010611 3D domain BF28_277 IPR033752 MetA family BF28_277 IPR029062 Class I glutamine amidotransferase-like BF28_277 IPR005697 Homoserine O-succinyltransferase MetA BF28_2772 IPR016181 Acyl-CoA N-acyltransferase BF28_2772 IPR011009 Protein kinase-like domain superfamily BF28_2772 IPR000182 GNAT domain BF28_2772 IPR002575 Aminoglycoside phosphotransferase BF28_2776 IPR006268 Phospho-2-dehydro-3-deoxyheptonate aldolase, subtype 2 BF28_2776 IPR006218 DAHP synthetase I/KDSA BF28_2776 IPR013785 Aldolase-type TIM barrel BF28_2776 IPR010954 Chorismate mutase, Firmicutes/Deinococcus BF28_2776 IPR002701 Chorismate mutase II, prokaryotic-type BF28_2776 IPR036979 Chorismate mutase domain superfamily BF28_2777 IPR020541 Chorismate synthase, conserved site BF28_2777 IPR000453 Chorismate synthase BF28_2777 IPR035904 Chorismate synthase AroC superfamily BF28_2778 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BF28_2778 IPR005861 Histidinol-phosphate aminotransferase family BF28_2778 IPR004839 Aminotransferase, class I/classII BF28_2778 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site BF28_2778 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BF28_2778 IPR015424 Pyridoxal phosphate-dependent transferase BF28_2779 IPR036291 NAD(P)-binding domain superfamily BF28_2779 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily BF28_2779 IPR002912 ACT domain BF28_2779 IPR003099 Prephenate dehydrogenase BF28_278 IPR016204 Homoserine dehydrogenase BF28_278 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding BF28_278 IPR036291 NAD(P)-binding domain superfamily BF28_278 IPR001342 Homoserine dehydrogenase, catalytic BF28_278 IPR019811 Homoserine dehydrogenase, conserved site BF28_278 IPR002912 ACT domain BF28_2780 IPR001986 Enolpyruvate transferase domain BF28_2780 IPR036968 Enolpyruvate transferase domain superfamily BF28_2780 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta BF28_2780 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site BF28_2780 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase BF28_2782 IPR009057 Homeobox-like domain superfamily BF28_2782 IPR023772 DNA-binding HTH domain, TetR-type, conserved site BF28_2782 IPR032551 HTH-type transcriptional repressor, C-terminal BF28_2782 IPR001647 DNA-binding HTH domain, TetR-type BF28_2783 IPR004869 Membrane transport protein MMPL domain BF28_2783 IPR000731 Sterol-sensing domain BF28_2786 IPR032781 ABC-transporter extension domain BF28_2786 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_2786 IPR003593 AAA+ ATPase domain BF28_2786 IPR003439 ABC transporter-like BF28_2787 IPR012160 Lipoteichoic acid synthase-like BF28_2787 IPR017850 Alkaline-phosphatase-like, core domain superfamily BF28_2787 IPR000917 Sulfatase, N-terminal BF28_2788 IPR022301 Integral membrane protein YjbE BF28_2788 IPR005496 Integral membrane protein TerC BF28_2789 IPR016152 Phosphotransferase/anion transporter BF28_2789 IPR002178 PTS EIIA type-2 domain BF28_2791 IPR004703 Phosphotransferase system, sugar-specific permease component BF28_2792 IPR002509 NodB homology domain BF28_2792 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel BF28_2797 IPR034660 DinB/YfiT-like putative metalloenzymes BF28_2797 IPR024775 DinB-like domain BF28_2798 IPR032713 Putative multidrug resistance efflux transporter BF28_28 IPR030946 Energy-coupling factor transporter ATP-binding protein EcfA2 BF28_28 IPR015856 ABC transporter, CbiO/EcfA subunit BF28_28 IPR003439 ABC transporter-like BF28_28 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_28 IPR003593 AAA+ ATPase domain BF28_28 IPR017871 ABC transporter, conserved site BF28_280 IPR028082 Periplasmic binding protein-like I BF28_280 IPR001761 Periplasmic binding protein/LacI sugar binding domain BF28_280 IPR010982 Lambda repressor-like, DNA-binding domain superfamily BF28_280 IPR000843 LacI-type HTH domain BF28_2802 IPR003679 Aminoglycoside N(3)-acetyltransferase BF28_2802 IPR028345 Aminoglycoside 3-N-acetyltransferase-like BF28_2807 IPR006357 HAD-superfamily hydrolase, subfamily IIA BF28_2807 IPR020476 NUDIX hydrolase BF28_2807 IPR023214 HAD superfamily BF28_2807 IPR015797 NUDIX hydrolase-like domain superfamily BF28_2807 IPR020084 NUDIX hydrolase, conserved site BF28_2807 IPR000086 NUDIX hydrolase domain BF28_2807 IPR036412 HAD-like superfamily BF28_281 IPR036514 SGNH hydrolase superfamily BF28_281 IPR013830 SGNH hydrolase-type esterase domain BF28_2811 IPR003439 ABC transporter-like BF28_2811 IPR003593 AAA+ ATPase domain BF28_2811 IPR017875 Aliphatic sulfonates import ATP-binding protein SsuB BF28_2811 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_2811 IPR017871 ABC transporter, conserved site BF28_2812 IPR010067 Aliphatic sulfonates-binding protein BF28_2812 IPR015168 SsuA/THI5-like BF28_2812 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BF28_2813 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BF28_2813 IPR035906 MetI-like superfamily BF28_2814 IPR036661 Luciferase-like domain superfamily BF28_2814 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent BF28_2814 IPR011251 Luciferase-like domain BF28_2816 IPR002549 Transmembrane protein TqsA-like BF28_282 IPR017871 ABC transporter, conserved site BF28_282 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_282 IPR003593 AAA+ ATPase domain BF28_282 IPR003439 ABC transporter-like BF28_2826 IPR003439 ABC transporter-like BF28_2826 IPR003593 AAA+ ATPase domain BF28_2826 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_283 IPR032688 ABC-2 family transporter protein BF28_2830 IPR004567 Type II pantothenate kinase BF28_2830 IPR011602 Type II pantothenate kinase, bacterial BF28_2831 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ BF28_2831 IPR029069 HotDog domain superfamily BF28_2832 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site BF28_2832 IPR019881 Diaminopimelate aminotransferase, DapL, Desulfovibrio-type BF28_2832 IPR004839 Aminotransferase, class I/classII BF28_2832 IPR019942 LL-diaminopimelate aminotransferase/aminotransferase ALD1 BF28_2832 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BF28_2832 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BF28_2832 IPR015424 Pyridoxal phosphate-dependent transferase BF28_2839 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BF28_2839 IPR013216 Methyltransferase type 11 BF28_284 IPR005122 Uracil-DNA glycosylase-like BF28_284 IPR036895 Uracil-DNA glycosylase-like domain superfamily BF28_284 IPR018085 Uracil-DNA glycosylase, active site BF28_284 IPR002043 Uracil-DNA glycosylase family 1 BF28_2841 IPR036452 Ribonucleoside hydrolase-like BF28_2841 IPR022976 Non-specific ribonucleoside hydrolase RihC BF28_2841 IPR023186 Inosine/uridine-preferring nucleoside hydrolase BF28_2841 IPR015910 Inosine/uridine-preferring nucleoside hydrolase, conserved site BF28_2841 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain BF28_2842 IPR007341 Transglycosylase-associated protein BF28_2846 IPR011701 Major facilitator superfamily BF28_2846 IPR020846 Major facilitator superfamily domain BF28_2846 IPR036259 MFS transporter superfamily BF28_2847 IPR039424 Solute-binding protein family 5 BF28_2847 IPR000914 Solute-binding protein family 5 domain BF28_2847 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain BF28_2848 IPR025063 Protein of unknown function DUF4004 BF28_2849 IPR007607 Bactofilin A/B BF28_285 IPR023845 Domain of unknown function DUF3817, transmembrane BF28_2851 IPR020846 Major facilitator superfamily domain BF28_2851 IPR011701 Major facilitator superfamily BF28_2851 IPR036259 MFS transporter superfamily BF28_2851 IPR004638 Drug resistance transporter EmrB-like BF28_2857 IPR011428 Spore coat protein X/V BF28_2858 IPR003797 DegV BF28_286 IPR036412 HAD-like superfamily BF28_286 IPR023214 HAD superfamily BF28_286 IPR006379 HAD-superfamily hydrolase, subfamily IIB BF28_286 IPR000150 Cof family BF28_2861 IPR004438 Peptidase M3B, oligoendopeptidase F BF28_2861 IPR042088 Oligoendopeptidase F, C-terminal domain BF28_2861 IPR013647 Oligopeptidase F, N-terminal domain BF28_2861 IPR001567 Peptidase M3A/M3B catalytic domain BF28_2862 IPR004629 Glycosyl transferase WecB/TagA/CpsF BF28_2862 IPR034714 N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase BF28_2865 IPR035994 Nucleoside phosphorylase superfamily BF28_2865 IPR000845 Nucleoside phosphorylase domain BF28_2865 IPR010049 MTA/SAH nucleosidase BF28_2866 IPR006439 HAD hydrolase, subfamily IA BF28_2866 IPR036412 HAD-like superfamily BF28_2866 IPR041492 Haloacid dehalogenase-like hydrolase BF28_2866 IPR023214 HAD superfamily BF28_2866 IPR023198 Phosphoglycolate phosphatase-like, domain 2 BF28_287 IPR006043 Xanthine/uracil/vitamin C permease BF28_287 IPR006042 Xanthine/uracil permease BF28_2870 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_2870 IPR011006 CheY-like superfamily BF28_2870 IPR001867 OmpR/PhoB-type DNA-binding domain BF28_2870 IPR016032 Signal transduction response regulator, C-terminal effector BF28_2870 IPR001789 Signal transduction response regulator, receiver domain BF28_2870 IPR039420 Transcriptional regulatory protein WalR-like BF28_2871 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BF28_2871 IPR003594 Histidine kinase/HSP90-like ATPase BF28_2871 IPR013767 PAS fold BF28_2871 IPR035965 PAS domain superfamily BF28_2871 IPR031967 PhoR, single Cache-like domain BF28_2871 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BF28_2871 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BF28_2871 IPR005467 Histidine kinase domain BF28_2871 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BF28_2871 IPR000014 PAS domain BF28_2872 IPR005674 CocE/Serine esterase BF28_2872 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal BF28_2872 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain BF28_2872 IPR008252 Peptidase S15, X-Pro dipeptidyl-peptidase BF28_2872 IPR029058 Alpha/Beta hydrolase fold BF28_2872 IPR008979 Galactose-binding-like domain superfamily BF28_2876 IPR016192 APOBEC/CMP deaminase, zinc-binding BF28_2876 IPR016193 Cytidine deaminase-like BF28_2876 IPR002125 Cytidine and deoxycytidylate deaminase domain BF28_2877 IPR029062 Class I glutamine amidotransferase-like BF28_2877 IPR002818 DJ-1/PfpI BF28_288 IPR013099 Potassium channel domain BF28_288 IPR036291 NAD(P)-binding domain superfamily BF28_288 IPR003148 Regulator of K+ conductance, N-terminal BF28_2880 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain BF28_2880 IPR036849 Enolase-like, C-terminal domain superfamily BF28_2880 IPR029017 Enolase-like, N-terminal BF28_2880 IPR029065 Enolase C-terminal domain-like BF28_2880 IPR034603 Dipeptide epimerase BF28_2880 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal BF28_2881 IPR041382 Bacterial dipeptidyl-peptidase SH3 domain BF28_2881 IPR038765 Papain-like cysteine peptidase superfamily BF28_2881 IPR000064 Endopeptidase, NLPC/P60 domain BF28_2882 IPR030678 Peptide/nickel binding protein, MppA-type BF28_2882 IPR039424 Solute-binding protein family 5 BF28_2882 IPR000914 Solute-binding protein family 5 domain BF28_2882 IPR023765 Solute-binding protein family 5, conserved site BF28_2883 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BF28_2883 IPR016181 Acyl-CoA N-acyltransferase BF28_2883 IPR001674 GMP synthase, C-terminal BF28_2883 IPR025777 GMP synthetase ATP pyrophosphatase domain BF28_2883 IPR011257 DNA glycosylase BF28_2883 IPR000182 GNAT domain BF28_2883 IPR029062 Class I glutamine amidotransferase-like BF28_2883 IPR005019 Methyladenine glycosylase BF28_2883 IPR017926 Glutamine amidotransferase BF28_2884 IPR006998 DltD BF28_2884 IPR023896 D-alanyl-lipoteichoic acid biosynthesis DltD, Firmicutes BF28_2887 IPR032816 SNARE associated Golgi protein BF28_2888 IPR006674 HD domain BF28_2888 IPR003607 HD/PDEase domain BF28_2889 IPR000182 GNAT domain BF28_2889 IPR011009 Protein kinase-like domain superfamily BF28_2889 IPR002575 Aminoglycoside phosphotransferase BF28_2889 IPR016181 Acyl-CoA N-acyltransferase BF28_2891 IPR014975 Protein of unknown function DUF1836 BF28_2894 IPR017224 Opine oxidase, subunit A/hydrogen cyanide synthase, subunit B BF28_2894 IPR023753 FAD/NAD(P)-binding domain BF28_2894 IPR036188 FAD/NAD(P)-binding domain superfamily BF28_2894 IPR007419 BFD-like [2Fe-2S]-binding domain BF28_2894 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily BF28_2896 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily BF28_2896 IPR007419 BFD-like [2Fe-2S]-binding domain BF28_2896 IPR036188 FAD/NAD(P)-binding domain superfamily BF28_2896 IPR023753 FAD/NAD(P)-binding domain BF28_2896 IPR017224 Opine oxidase, subunit A/hydrogen cyanide synthase, subunit B BF28_2897 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_2897 IPR025944 Sigma-54 interaction domain, conserved site BF28_2897 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 BF28_2897 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 BF28_2897 IPR002197 DNA binding HTH domain, Fis-type BF28_2897 IPR028082 Periplasmic binding protein-like I BF28_2897 IPR002078 RNA polymerase sigma factor 54 interaction domain BF28_2897 IPR003593 AAA+ ATPase domain BF28_2897 IPR009057 Homeobox-like domain superfamily BF28_2897 IPR000014 PAS domain BF28_2898 IPR012727 Glycine oxidase ThiO BF28_2898 IPR036188 FAD/NAD(P)-binding domain superfamily BF28_2898 IPR006076 FAD dependent oxidoreductase BF28_2899 IPR008794 Proline racemase family BF28_29 IPR015856 ABC transporter, CbiO/EcfA subunit BF28_29 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_29 IPR003439 ABC transporter-like BF28_29 IPR017871 ABC transporter, conserved site BF28_29 IPR003593 AAA+ ATPase domain BF28_29 IPR030947 Energy-coupling factor transporter ATP-binding protein EcfA1 BF28_290 IPR006696 Protein of unknown function DUF423 BF28_2900 IPR008794 Proline racemase family BF28_2901 IPR013785 Aldolase-type TIM barrel BF28_2901 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA BF28_2901 IPR002220 DapA-like BF28_2901 IPR020625 Schiff base-forming aldolase, active site BF28_2901 IPR020624 Schiff base-forming aldolase, conserved site BF28_2902 IPR016161 Aldehyde/histidinol dehydrogenase BF28_2902 IPR016163 Aldehyde dehydrogenase, C-terminal BF28_2902 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent BF28_2902 IPR016162 Aldehyde dehydrogenase, N-terminal BF28_2902 IPR015590 Aldehyde dehydrogenase domain BF28_2902 IPR029510 Aldehyde dehydrogenase, glutamic acid active site BF28_2903 IPR001463 Sodium:alanine symporter BF28_2904 IPR029032 AhpD-like BF28_2904 IPR003779 Carboxymuconolactone decarboxylase-like BF28_2906 IPR041029 N-acetylglucosamine binding protein A domain 2 BF28_2906 IPR014756 Immunoglobulin E-set BF28_2906 IPR004302 Cellulose/chitin-binding protein, N-terminal BF28_2906 IPR020879 N-acetylglucosamine-binding protein A BF28_2907 IPR038222 DHHA2 domain superfamily BF28_2907 IPR001667 DDH domain BF28_2907 IPR038763 DHH phosphoesterase superfamily BF28_2907 IPR022934 Manganese-dependent inorganic pyrophosphatase, probable BF28_2907 IPR004097 DHHA2 domain BF28_291 IPR014099 Spore coat protein GerQ BF28_2914 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain BF28_2914 IPR011545 DEAD/DEAH box helicase domain BF28_2914 IPR004589 DNA helicase, ATP-dependent, RecQ type BF28_2914 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial BF28_2914 IPR014001 Helicase superfamily 1/2, ATP-binding domain BF28_2914 IPR001650 Helicase, C-terminal BF28_2914 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_2914 IPR010997 HRDC-like superfamily BF28_2914 IPR002121 HRDC domain BF28_2914 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_2914 IPR036390 Winged helix DNA-binding domain superfamily BF28_2914 IPR018982 RQC domain BF28_2915 IPR013024 Gamma-glutamyl cyclotransferase-like BF28_2915 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like BF28_2915 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily BF28_2918 IPR027785 UvrD-like helicase C-terminal domain BF28_2918 IPR014016 UvrD-like helicase, ATP-binding domain BF28_2918 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_2918 IPR000212 DNA helicase, UvrD/REP type BF28_292 IPR011105 Cell wall hydrolase, SleB BF28_292 IPR042047 Cell wall hydrolase SleB, domain 1 BF28_2922 IPR000182 GNAT domain BF28_2922 IPR016181 Acyl-CoA N-acyltransferase BF28_2927 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BF28_2927 IPR001279 Metallo-beta-lactamase BF28_2927 IPR025405 Domain of unknown function DUF4131 BF28_2927 IPR004797 Competence protein ComEC/Rec2 BF28_2927 IPR004477 ComEC/Rec2-related protein BF28_2927 IPR035681 ComA-like, MBL domain BF28_2929 IPR038056 YjbR-like superfamily BF28_2929 IPR007351 Uncharacterised protein YjbR BF28_293 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal BF28_293 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily BF28_293 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal BF28_293 IPR015956 Penicillin-binding protein, C-terminal domain superfamily BF28_293 IPR012338 Beta-lactamase/transpeptidase-like BF28_293 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A BF28_2930 IPR013216 Methyltransferase type 11 BF28_2930 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC BF28_2930 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BF28_2931 IPR021257 Protein of unknown function DUF2809 BF28_2934 IPR004302 Cellulose/chitin-binding protein, N-terminal BF28_2934 IPR041029 N-acetylglucosamine binding protein A domain 2 BF28_2934 IPR020879 N-acetylglucosamine-binding protein A BF28_2934 IPR014756 Immunoglobulin E-set BF28_2935 IPR000182 GNAT domain BF28_2935 IPR016181 Acyl-CoA N-acyltransferase BF28_2935 IPR039143 Glucosamine 6-phosphate N-acetyltransferase BF28_2936 IPR037171 NagB/RpiA transferase-like BF28_2936 IPR004788 Ribose 5-phosphate isomerase, type A BF28_2936 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup BF28_2939 IPR033135 ClpP, histidine active site BF28_2939 IPR029045 ClpP/crotonase-like domain superfamily BF28_2939 IPR001907 ATP-dependent Clp protease proteolytic subunit BF28_2939 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA BF28_2940 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain BF28_2941 IPR000644 CBS domain BF28_2941 IPR003593 AAA+ ATPase domain BF28_2941 IPR003439 ABC transporter-like BF28_2941 IPR017871 ABC transporter, conserved site BF28_2941 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_2941 IPR005892 Glycine betaine transport ATP-binding subunit BF28_2942 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BF28_2942 IPR035906 MetI-like superfamily BF28_2947 IPR015797 NUDIX hydrolase-like domain superfamily BF28_2947 IPR003564 Dihydroneopterin triphosphate diphosphatase BF28_2947 IPR000086 NUDIX hydrolase domain BF28_2947 IPR020084 NUDIX hydrolase, conserved site BF28_2949 IPR026008 Uridine kinase BF28_2949 IPR006083 Phosphoribulokinase/uridine kinase BF28_2949 IPR000764 Uridine kinase-like BF28_2949 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_295 IPR012147 Phosphate acetyl/butyryltransferase BF28_295 IPR004614 Phosphate acetyltransferase BF28_295 IPR042113 Phosphate acetyltransferase, domain 1 BF28_295 IPR042112 Phosphate acetyltransferase, domain 2 BF28_295 IPR002505 Phosphate acetyl/butaryl transferase BF28_2950 IPR007344 GrpB/Dephospho-CoA kinase BF28_2950 IPR000182 GNAT domain BF28_2950 IPR016181 Acyl-CoA N-acyltransferase BF28_2951 IPR020904 Short-chain dehydrogenase/reductase, conserved site BF28_2951 IPR036291 NAD(P)-binding domain superfamily BF28_2951 IPR002347 Short-chain dehydrogenase/reductase SDR BF28_2953 IPR029061 Thiamin diphosphate-binding fold BF28_2953 IPR001017 Dehydrogenase, E1 component BF28_2954 IPR029061 Thiamin diphosphate-binding fold BF28_2954 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II BF28_2954 IPR005475 Transketolase-like, pyrimidine-binding domain BF28_2954 IPR033248 Transketolase, C-terminal domain BF28_2955 IPR011053 Single hybrid motif BF28_2955 IPR036625 E3-binding domain superfamily BF28_2955 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily BF28_2955 IPR000089 Biotin/lipoyl attachment BF28_2955 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain BF28_2955 IPR004167 Peripheral subunit-binding domain BF28_2956 IPR023753 FAD/NAD(P)-binding domain BF28_2956 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site BF28_2956 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BF28_2956 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I BF28_2956 IPR036188 FAD/NAD(P)-binding domain superfamily BF28_2956 IPR006258 Dihydrolipoamide dehydrogenase BF28_2956 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily BF28_296 IPR024897 Octanoyltransferase LipL BF28_296 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain BF28_2960 IPR037171 NagB/RpiA transferase-like BF28_2960 IPR001034 DeoR-type HTH domain BF28_2960 IPR014036 DeoR C-terminal sensor domain BF28_2960 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_2960 IPR018356 Transcription regulator, HTH DeoR-type, conserved site BF28_2960 IPR036390 Winged helix DNA-binding domain superfamily BF28_2961 IPR016181 Acyl-CoA N-acyltransferase BF28_2961 IPR000182 GNAT domain BF28_2964 IPR003018 GAF domain BF28_2964 IPR025944 Sigma-54 interaction domain, conserved site BF28_2964 IPR029016 GAF-like domain superfamily BF28_2964 IPR002078 RNA polymerase sigma factor 54 interaction domain BF28_2964 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_2964 IPR009057 Homeobox-like domain superfamily BF28_2964 IPR002197 DNA binding HTH domain, Fis-type BF28_2964 IPR003593 AAA+ ATPase domain BF28_2969 IPR036412 HAD-like superfamily BF28_2969 IPR023214 HAD superfamily BF28_2969 IPR020476 NUDIX hydrolase BF28_2969 IPR006357 HAD-superfamily hydrolase, subfamily IIA BF28_2969 IPR020084 NUDIX hydrolase, conserved site BF28_2969 IPR000086 NUDIX hydrolase domain BF28_2969 IPR015797 NUDIX hydrolase-like domain superfamily BF28_2970 IPR013570 Transcription regulator YsiA, C-terminal BF28_2970 IPR009057 Homeobox-like domain superfamily BF28_2970 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily BF28_2970 IPR001647 DNA-binding HTH domain, TetR-type BF28_2971 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BF28_2971 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BF28_2971 IPR015424 Pyridoxal phosphate-dependent transferase BF28_2971 IPR000192 Aminotransferase class V domain BF28_2971 IPR010111 Kynureninase BF28_2972 IPR017484 Kynurenine formamidase, bacteria BF28_2972 IPR037175 Kynurenine formamidase superfamily BF28_2972 IPR007325 Kynurenine formamidase/cyclase-like BF28_2973 IPR037217 Tryptophan/Indoleamine 2,3-dioxygenase-like BF28_2973 IPR004981 Tryptophan 2,3-dioxygenase BF28_2973 IPR017485 Tryptophan 2,3-dioxygenase, bacterial BF28_2976 IPR036365 PGBD-like superfamily BF28_2976 IPR042047 Cell wall hydrolase SleB, domain 1 BF28_2976 IPR011105 Cell wall hydrolase, SleB BF28_2976 IPR036366 PGBD superfamily BF28_2976 IPR014224 Spore cortex-lytic enzyme SleB BF28_2976 IPR002477 Peptidoglycan binding-like BF28_2977 IPR025711 PepSY domain BF28_2977 IPR014239 Spore germination YpeB BF28_2978 IPR014247 Sporulation lipoprotein YhcN/YlaJ BF28_2978 IPR019076 Sporulation lipoprotein YhcN/YlaJ-like BF28_298 IPR017877 Myb-like domain BF28_298 IPR014243 Transcription factor, RsfA BF28_2980 IPR000182 GNAT domain BF28_2980 IPR016181 Acyl-CoA N-acyltransferase BF28_2981 IPR010343 Aromatic acid exporter family member 1 BF28_2986 IPR000073 Alpha/beta hydrolase fold-1 BF28_2986 IPR029058 Alpha/Beta hydrolase fold BF28_2987 IPR015424 Pyridoxal phosphate-dependent transferase BF28_2987 IPR036390 Winged helix DNA-binding domain superfamily BF28_2987 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BF28_2987 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_2987 IPR000524 Transcription regulator HTH, GntR BF28_2987 IPR004839 Aminotransferase, class I/classII BF28_2987 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BF28_2988 IPR000620 EamA domain BF28_2988 IPR004779 Carboxylate/Amino Acid/Amine Transporter BF28_2989 IPR003593 AAA+ ATPase domain BF28_2989 IPR024633 DnaA N-terminal domain BF28_2989 IPR010921 Trp repressor/replication initiator BF28_2989 IPR020591 Chromosomal replication control, initiator DnaA-like BF28_2989 IPR018312 Chromosomal replication control, initiator DnaA, conserved site BF28_2989 IPR013317 Chromosomal replication initiator protein DnaA BF28_2989 IPR013159 Chromosomal replication initiator, DnaA C-terminal BF28_2989 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_2989 IPR038454 DnaA, N-terminal domain superfamily BF28_2989 IPR001957 Chromosomal replication control, initiator DnaA BF28_299 IPR020880 Protein of unknown function UPF0741 BF28_299 IPR009910 Protein of unknown function DUF1450 BF28_2990 IPR023201 SecY domain superfamily BF28_2990 IPR002208 SecY/SEC61-alpha family BF28_2990 IPR030659 SecY conserved site BF28_2990 IPR026593 Protein translocase subunit SecY BF28_2991 IPR022858 Metallothiol transferase FosB BF28_2991 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain BF28_2991 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BF28_2991 IPR037523 Vicinal oxygen chelate (VOC) domain BF28_2996 IPR011096 FTP domain BF28_2996 IPR025711 PepSY domain BF28_2996 IPR013856 Peptidase M4 domain BF28_2996 IPR001570 Peptidase M4, C-terminal BF28_2996 IPR027268 Peptidase M4/M1, CTD superfamily BF28_2996 IPR023612 Peptidase M4 BF28_2997 IPR011840 Pullulanase, type I BF28_2997 IPR014756 Immunoglobulin E-set BF28_2997 IPR013783 Immunoglobulin-like fold BF28_2997 IPR017853 Glycoside hydrolase superfamily BF28_2997 IPR013784 Carbohydrate-binding-like fold BF28_2997 IPR005323 Pullulanase, carbohydrate-binding module 41 BF28_2997 IPR006047 Glycosyl hydrolase, family 13, catalytic domain BF28_2997 IPR013780 Glycosyl hydrolase, all-beta BF28_2997 IPR004193 Glycoside hydrolase, family 13, N-terminal BF28_2998 IPR033879 Undecaprenyl-diphosphatase BF28_2998 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily BF28_2998 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase BF28_3 IPR004381 Glycerate kinase BF28_3 IPR018197 Glycerate kinase, restriction-enzyme-like fold BF28_3 IPR018193 Glycerate kinase, flavodoxin-like fold BF28_3 IPR036129 Glycerate kinase superfamily BF28_30 IPR000456 Ribosomal protein L17 BF28_30 IPR036373 Ribosomal protein L17 superfamily BF28_300 IPR037294 ABC transporter, BtuC-like BF28_300 IPR000522 ABC transporter, permease protein, BtuC-like BF28_3003 IPR036412 HAD-like superfamily BF28_3003 IPR006439 HAD hydrolase, subfamily IA BF28_3003 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB BF28_3003 IPR041492 Haloacid dehalogenase-like hydrolase BF28_3003 IPR023214 HAD superfamily BF28_3003 IPR023198 Phosphoglycolate phosphatase-like, domain 2 BF28_3008 IPR036188 FAD/NAD(P)-binding domain superfamily BF28_3008 IPR006076 FAD dependent oxidoreductase BF28_301 IPR000522 ABC transporter, permease protein, BtuC-like BF28_301 IPR037294 ABC transporter, BtuC-like BF28_3016 IPR035901 GIY-YIG endonuclease superfamily BF28_3016 IPR000305 GIY-YIG endonuclease BF28_3016 IPR014527 Excinuclease GIY-YIG catalytic domain-containing uncharacterised conserved protein BF28_3018 IPR003824 Undecaprenyl-diphosphatase UppP BF28_3019 IPR036188 FAD/NAD(P)-binding domain superfamily BF28_302 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_302 IPR017871 ABC transporter, conserved site BF28_302 IPR003439 ABC transporter-like BF28_302 IPR003593 AAA+ ATPase domain BF28_3021 IPR024775 DinB-like domain BF28_3021 IPR034660 DinB/YfiT-like putative metalloenzymes BF28_3021 IPR023774 Putative metal-dependent hydrolase YfiT BF28_3023 IPR037063 Bacterial Pleckstrin homology domain superfamily BF28_3023 IPR012544 Bacterial Pleckstrin homology domain BF28_3024 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase BF28_3024 IPR002641 Patatin-like phospholipase domain BF28_3024 IPR037483 YjjU-like BF28_3028 IPR035948 YwqG-like superfamily BF28_3028 IPR015315 Protein of unknown function DUF1963 BF28_303 IPR002491 ABC transporter periplasmic binding domain BF28_3031 IPR000086 NUDIX hydrolase domain BF28_3031 IPR020084 NUDIX hydrolase, conserved site BF28_3031 IPR015797 NUDIX hydrolase-like domain superfamily BF28_3031 IPR020476 NUDIX hydrolase BF28_3031 IPR003562 Mutator MutX protein BF28_3032 IPR001001 DNA polymerase III, beta sliding clamp BF28_3032 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal BF28_3032 IPR022637 DNA polymerase III, beta sliding clamp, central BF28_3032 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal BF28_3033 IPR020084 NUDIX hydrolase, conserved site BF28_3033 IPR022925 NADH pyrophosphatase NudC BF28_3033 IPR015797 NUDIX hydrolase-like domain superfamily BF28_3033 IPR000086 NUDIX hydrolase domain BF28_3033 IPR015376 Zinc ribbon, NADH pyrophosphatase BF28_3034 IPR011701 Major facilitator superfamily BF28_3034 IPR020846 Major facilitator superfamily domain BF28_3034 IPR036259 MFS transporter superfamily BF28_3034 IPR004741 Oxalate/formate antiporter family transporter BF28_3039 IPR000086 NUDIX hydrolase domain BF28_3039 IPR020084 NUDIX hydrolase, conserved site BF28_3039 IPR020476 NUDIX hydrolase BF28_3039 IPR015797 NUDIX hydrolase-like domain superfamily BF28_3039 IPR003561 Mutator MutT BF28_304 IPR003607 HD/PDEase domain BF28_304 IPR006674 HD domain BF28_3042 IPR012341 Six-hairpin glycosidase-like superfamily BF28_3042 IPR019834 Glycoside hydrolase, family 8, conserved site BF28_3042 IPR002037 Glycoside hydrolase, family 8 BF28_3042 IPR008928 Six-hairpin glycosidase superfamily BF28_3043 IPR000620 EamA domain BF28_3044 IPR015424 Pyridoxal phosphate-dependent transferase BF28_3044 IPR036390 Winged helix DNA-binding domain superfamily BF28_3044 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_3044 IPR000524 Transcription regulator HTH, GntR BF28_3044 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BF28_3044 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BF28_3044 IPR004839 Aminotransferase, class I/classII BF28_3048 IPR030395 Glycerophosphodiester phosphodiesterase domain BF28_3048 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily BF28_305 IPR018191 4-oxalocrotonate tautomerase, Pseudomonas-type BF28_305 IPR014347 Tautomerase/MIF superfamily BF28_305 IPR004370 4-oxalocrotonate tautomerase BF28_3052 IPR011701 Major facilitator superfamily BF28_3052 IPR020846 Major facilitator superfamily domain BF28_3052 IPR036259 MFS transporter superfamily BF28_3054 IPR015376 Zinc ribbon, NADH pyrophosphatase BF28_3054 IPR000086 NUDIX hydrolase domain BF28_3054 IPR015797 NUDIX hydrolase-like domain superfamily BF28_3054 IPR022925 NADH pyrophosphatase NudC BF28_3055 IPR012338 Beta-lactamase/transpeptidase-like BF28_3055 IPR001466 Beta-lactamase-related BF28_3057 IPR036390 Winged helix DNA-binding domain superfamily BF28_3057 IPR005650 BlaI transcriptional regulatory family BF28_3057 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_3058 IPR012337 Ribonuclease H-like superfamily BF28_3058 IPR002559 Transposase, IS4-like BF28_306 IPR008915 Peptidase M50 BF28_3061 IPR003593 AAA+ ATPase domain BF28_3061 IPR017871 ABC transporter, conserved site BF28_3061 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_3061 IPR003439 ABC transporter-like BF28_3062 IPR002818 DJ-1/PfpI BF28_3062 IPR029062 Class I glutamine amidotransferase-like BF28_3064 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily BF28_3064 IPR006119 Resolvase, N-terminal catalytic domain BF28_3064 IPR006118 Recombinase, conserved site BF28_3064 IPR006120 Resolvase, HTH domain BF28_307 IPR014852 Uncharacterised protein YwhD BF28_3073 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily BF28_3073 IPR033879 Undecaprenyl-diphosphatase BF28_3073 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase BF28_3074 IPR013149 Alcohol dehydrogenase, C-terminal BF28_3074 IPR013154 Alcohol dehydrogenase, N-terminal BF28_3074 IPR036291 NAD(P)-binding domain superfamily BF28_3074 IPR011032 GroES-like superfamily BF28_3074 IPR020843 Polyketide synthase, enoylreductase domain BF28_3075 IPR007344 GrpB/Dephospho-CoA kinase BF28_3077 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BF28_3077 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BF28_3077 IPR005467 Histidine kinase domain BF28_3077 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BF28_3077 IPR003594 Histidine kinase/HSP90-like ATPase BF28_3077 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BF28_308 IPR001460 Penicillin-binding protein, transpeptidase BF28_308 IPR036950 Penicillin binding protein transglycosylase domain BF28_308 IPR023346 Lysozyme-like domain superfamily BF28_308 IPR001264 Glycosyl transferase, family 51 BF28_308 IPR012338 Beta-lactamase/transpeptidase-like BF28_3080 IPR003593 AAA+ ATPase domain BF28_3080 IPR003439 ABC transporter-like BF28_3080 IPR022216 Putative ABC cobalt transporter BF28_3080 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_3080 IPR017871 ABC transporter, conserved site BF28_3081 IPR022914 Protein of unknown function UPF0397 BF28_3081 IPR009825 ECF transporter, substrate-specific component-like BF28_3082 IPR001920 Asp/Glu racemase BF28_3082 IPR018187 Asp/Glu racemase, active site 1 BF28_3082 IPR015942 Asp/Glu/hydantoin racemase BF28_3082 IPR004380 Aspartate racemase BF28_3082 IPR033134 Asp/Glu racemase, active site 2 BF28_3083 IPR006326 UDP-glycosyltransferase, MGT BF28_3083 IPR002213 UDP-glucuronosyl/UDP-glucosyltransferase BF28_3085 IPR003594 Histidine kinase/HSP90-like ATPase BF28_3085 IPR005467 Histidine kinase domain BF28_3085 IPR035965 PAS domain superfamily BF28_3085 IPR013767 PAS fold BF28_3085 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BF28_3085 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BF28_3085 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BF28_3085 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BF28_3085 IPR000014 PAS domain BF28_3086 IPR036412 HAD-like superfamily BF28_3086 IPR023214 HAD superfamily BF28_3086 IPR006379 HAD-superfamily hydrolase, subfamily IIB BF28_3086 IPR000150 Cof family BF28_3088 IPR001128 Cytochrome P450 BF28_3088 IPR017972 Cytochrome P450, conserved site BF28_3088 IPR036396 Cytochrome P450 superfamily BF28_3088 IPR002397 Cytochrome P450, B-class BF28_309 IPR030395 Glycerophosphodiester phosphodiesterase domain BF28_309 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily BF28_3090 IPR011437 Domain of unknown function DUF1540 BF28_3091 IPR001451 Hexapeptide repeat BF28_3091 IPR018357 Hexapeptide transferase, conserved site BF28_3091 IPR011004 Trimeric LpxA-like superfamily BF28_3093 IPR017972 Cytochrome P450, conserved site BF28_3093 IPR002397 Cytochrome P450, B-class BF28_3093 IPR036396 Cytochrome P450 superfamily BF28_3093 IPR001128 Cytochrome P450 BF28_31 IPR011262 DNA-directed RNA polymerase, insert domain BF28_31 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type BF28_31 IPR011773 DNA-directed RNA polymerase, alpha subunit BF28_31 IPR036603 RNA polymerase, RBP11-like subunit BF28_31 IPR011260 RNA polymerase, alpha subunit, C-terminal BF28_31 IPR036643 DNA-directed RNA polymerase, insert domain superfamily BF28_310 IPR037392 YfmP, Helix-Turn-Helix DNA binding domain BF28_310 IPR000551 MerR-type HTH domain BF28_310 IPR009061 Putative DNA-binding domain superfamily BF28_3102 IPR018925 Phage terminase small subunit BF28_3102 IPR005335 Terminase small subunit BF28_3102 IPR038713 Terminase small subunit, N-terminal domain superfamily BF28_311 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG BF28_311 IPR011701 Major facilitator superfamily BF28_311 IPR036259 MFS transporter superfamily BF28_311 IPR020846 Major facilitator superfamily domain BF28_3111 IPR016084 Haem oxygenase-like, multi-helical BF28_3111 IPR027574 Thiaminase II BF28_3111 IPR004305 Thiaminase-2/PQQC BF28_3112 IPR016185 Pre-ATP-grasp domain superfamily BF28_3112 IPR011127 D-alanine--D-alanine ligase, N-terminal domain BF28_3112 IPR005905 D-alanine--D-alanine ligase BF28_3112 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site BF28_3112 IPR013815 ATP-grasp fold, subdomain 1 BF28_3112 IPR011095 D-alanine--D-alanine ligase, C-terminal BF28_3112 IPR011761 ATP-grasp fold BF28_3113 IPR004839 Aminotransferase, class I/classII BF28_3113 IPR015424 Pyridoxal phosphate-dependent transferase BF28_3113 IPR036390 Winged helix DNA-binding domain superfamily BF28_3113 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BF28_3113 IPR000524 Transcription regulator HTH, GntR BF28_3113 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_3114 IPR002912 ACT domain BF28_3114 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding BF28_3114 IPR016204 Homoserine dehydrogenase BF28_3114 IPR001342 Homoserine dehydrogenase, catalytic BF28_3114 IPR019811 Homoserine dehydrogenase, conserved site BF28_3114 IPR036291 NAD(P)-binding domain superfamily BF28_3115 IPR029058 Alpha/Beta hydrolase fold BF28_3118 IPR027022 ABC transporter permease protein, BceB-type BF28_3118 IPR003838 ABC transporter permease protein domain BF28_3119 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_3119 IPR017871 ABC transporter, conserved site BF28_3119 IPR003439 ABC transporter-like BF28_3119 IPR003593 AAA+ ATPase domain BF28_312 IPR037163 Spermidine synthase, tetramerisation domain superfamily BF28_312 IPR035246 Spermidine synthase, tetramerisation domain BF28_312 IPR001045 Spermidine/spermine synthases BF28_312 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BF28_312 IPR030373 Polyamine biosynthesis domain, conserved site BF28_312 IPR030374 Polyamine biosynthesis domain BF28_3124 IPR005467 Histidine kinase domain BF28_3124 IPR003594 Histidine kinase/HSP90-like ATPase BF28_3124 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BF28_3124 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BF28_3124 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BF28_3125 IPR011006 CheY-like superfamily BF28_3125 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_3125 IPR039420 Transcriptional regulatory protein WalR-like BF28_3125 IPR001789 Signal transduction response regulator, receiver domain BF28_3125 IPR016032 Signal transduction response regulator, C-terminal effector BF28_3125 IPR001867 OmpR/PhoB-type DNA-binding domain BF28_3126 IPR004304 Acetamidase/Formamidase BF28_3127 IPR011105 Cell wall hydrolase, SleB BF28_3127 IPR042047 Cell wall hydrolase SleB, domain 1 BF28_3128 IPR002904 Lysine-tRNA ligase BF28_3128 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site BF28_3128 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 BF28_3128 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding BF28_3128 IPR042078 Lysine tRNA ligase, stem contact fold domain BF28_3128 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BF28_3128 IPR023386 Lysine-tRNA ligase, insertion domain superfamily BF28_313 IPR023696 Ureohydrolase domain superfamily BF28_313 IPR020855 Ureohydrolase, manganese-binding site BF28_313 IPR006035 Ureohydrolase BF28_313 IPR005925 Agmatinase-related BF28_3130 IPR011042 Six-bladed beta-propeller, TolB-like BF28_3130 IPR013658 SMP-30/Gluconolactonase/LRE-like region BF28_3130 IPR005511 Senescence marker protein-30 (SMP-30) BF28_3132 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase BF28_3132 IPR035911 MurE/MurF, N-terminal BF28_3132 IPR000713 Mur ligase, N-terminal catalytic domain BF28_3132 IPR013221 Mur ligase, central BF28_3132 IPR036615 Mur ligase, C-terminal domain superfamily BF28_3132 IPR004101 Mur ligase, C-terminal BF28_3132 IPR036565 Mur-like, catalytic domain superfamily BF28_3132 IPR018109 Folylpolyglutamate synthetase, conserved site BF28_3133 IPR004101 Mur ligase, C-terminal BF28_3133 IPR013221 Mur ligase, central BF28_3133 IPR035911 MurE/MurF, N-terminal BF28_3133 IPR000713 Mur ligase, N-terminal catalytic domain BF28_3133 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase BF28_3133 IPR036615 Mur ligase, C-terminal domain superfamily BF28_3133 IPR036565 Mur-like, catalytic domain superfamily BF28_3136 IPR013216 Methyltransferase type 11 BF28_3136 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BF28_3137 IPR023090 UPF0702, alpha/beta domain superfamily BF28_3137 IPR007353 Protein of unknown function DUF421 BF28_3138 IPR011032 GroES-like superfamily BF28_3138 IPR036291 NAD(P)-binding domain superfamily BF28_3138 IPR020843 Polyketide synthase, enoylreductase domain BF28_3138 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site BF28_3138 IPR004627 L-threonine 3-dehydrogenase BF28_3138 IPR013154 Alcohol dehydrogenase, N-terminal BF28_3138 IPR013149 Alcohol dehydrogenase, C-terminal BF28_3141 IPR004839 Aminotransferase, class I/classII BF28_3141 IPR036390 Winged helix DNA-binding domain superfamily BF28_3141 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BF28_3141 IPR000524 Transcription regulator HTH, GntR BF28_3141 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_3141 IPR015424 Pyridoxal phosphate-dependent transferase BF28_3144 IPR018062 HTH domain AraC-type, conserved site BF28_3144 IPR018060 DNA binding HTH domain, AraC-type BF28_3144 IPR009057 Homeobox-like domain superfamily BF28_3150 IPR026669 Arsenite methyltransferase-like BF28_3150 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BF28_3150 IPR025714 Methyltransferase domain BF28_3151 IPR011701 Major facilitator superfamily BF28_3151 IPR020846 Major facilitator superfamily domain BF28_3151 IPR036259 MFS transporter superfamily BF28_3152 IPR000551 MerR-type HTH domain BF28_3152 IPR011789 Cu(I)-responsive transcriptional regulator BF28_3152 IPR009061 Putative DNA-binding domain superfamily BF28_3152 IPR015358 Transcription regulator MerR, DNA binding BF28_3153 IPR012338 Beta-lactamase/transpeptidase-like BF28_3153 IPR001466 Beta-lactamase-related BF28_3159 IPR023612 Peptidase M4 BF28_3159 IPR025711 PepSY domain BF28_3159 IPR027268 Peptidase M4/M1, CTD superfamily BF28_3159 IPR001570 Peptidase M4, C-terminal BF28_3159 IPR013856 Peptidase M4 domain BF28_3159 IPR011096 FTP domain BF28_316 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily BF28_316 IPR029062 Class I glutamine amidotransferase-like BF28_316 IPR040449 LD-carboxypeptidase, N-terminal BF28_316 IPR040921 LD-carboxypeptidase, C-terminal BF28_316 IPR003507 Peptidase family S66 BF28_316 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal BF28_3164 IPR035994 Nucleoside phosphorylase superfamily BF28_3164 IPR000845 Nucleoside phosphorylase domain BF28_3164 IPR010049 MTA/SAH nucleosidase BF28_3165 IPR003607 HD/PDEase domain BF28_3165 IPR006674 HD domain BF28_3166 IPR011006 CheY-like superfamily BF28_3166 IPR001867 OmpR/PhoB-type DNA-binding domain BF28_3166 IPR016032 Signal transduction response regulator, C-terminal effector BF28_3166 IPR001789 Signal transduction response regulator, receiver domain BF28_3166 IPR039420 Transcriptional regulatory protein WalR-like BF28_3166 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_3167 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BF28_3167 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BF28_3167 IPR003594 Histidine kinase/HSP90-like ATPase BF28_3167 IPR005467 Histidine kinase domain BF28_3167 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BF28_3167 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BF28_3168 IPR012338 Beta-lactamase/transpeptidase-like BF28_3168 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal BF28_3168 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily BF28_3168 IPR015956 Penicillin-binding protein, C-terminal domain superfamily BF28_3168 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal BF28_3168 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A BF28_3169 IPR007837 DNA damage-inducible protein DinB BF28_3169 IPR034660 DinB/YfiT-like putative metalloenzymes BF28_317 IPR012674 Calycin BF28_317 IPR015231 Protein of unknown function DUF1934 BF28_3171 IPR000764 Uridine kinase-like BF28_3171 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_3171 IPR006083 Phosphoribulokinase/uridine kinase BF28_3171 IPR026008 Uridine kinase BF28_3172 IPR000182 GNAT domain BF28_3172 IPR016181 Acyl-CoA N-acyltransferase BF28_3176 IPR000873 AMP-dependent synthetase/ligase BF28_3176 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain BF28_3176 IPR011904 Acetate-CoA ligase BF28_3176 IPR042099 AMP-dependent synthetase-like superfamily BF28_3176 IPR020845 AMP-binding, conserved site BF28_3176 IPR025110 AMP-binding enzyme, C-terminal domain BF28_3177 IPR029045 ClpP/crotonase-like domain superfamily BF28_3177 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal BF28_3177 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal BF28_3177 IPR034733 Acetyl-CoA carboxylase BF28_3178 IPR029045 ClpP/crotonase-like domain superfamily BF28_3178 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site BF28_3178 IPR001753 Enoyl-CoA hydratase/isomerase BF28_3178 IPR014748 Enoyl-CoA hydratase, C-terminal BF28_3179 IPR013785 Aldolase-type TIM barrel BF28_3179 IPR000891 Pyruvate carboxyltransferase BF28_318 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding BF28_318 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BF28_318 IPR008909 DALR anticodon binding BF28_318 IPR035684 Arginyl-tRNA synthetase, catalytic core domain BF28_318 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily BF28_318 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site BF28_318 IPR001278 Arginine-tRNA ligase BF28_318 IPR005148 Arginyl tRNA synthetase N-terminal domain BF28_3180 IPR000089 Biotin/lipoyl attachment BF28_3180 IPR011053 Single hybrid motif BF28_3181 IPR011761 ATP-grasp fold BF28_3181 IPR013815 ATP-grasp fold, subdomain 1 BF28_3181 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain BF28_3181 IPR011764 Biotin carboxylation domain BF28_3181 IPR005482 Biotin carboxylase, C-terminal BF28_3181 IPR016185 Pre-ATP-grasp domain superfamily BF28_3181 IPR011054 Rudiment single hybrid motif BF28_3181 IPR005481 Biotin carboxylase-like, N-terminal domain BF28_3182 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain BF28_3182 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal BF28_3182 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily BF28_3182 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily BF28_3182 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal BF28_3182 IPR006089 Acyl-CoA dehydrogenase, conserved site BF28_3182 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal BF28_3185 IPR013570 Transcription regulator YsiA, C-terminal BF28_3185 IPR001647 DNA-binding HTH domain, TetR-type BF28_3185 IPR009057 Homeobox-like domain superfamily BF28_3185 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily BF28_3187 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_3187 IPR017871 ABC transporter, conserved site BF28_3187 IPR003439 ABC transporter-like BF28_3187 IPR003593 AAA+ ATPase domain BF28_319 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_319 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 BF28_319 IPR007627 RNA polymerase sigma-70 region 2 BF28_319 IPR013324 RNA polymerase sigma factor, region 3/4-like BF28_319 IPR013325 RNA polymerase sigma factor, region 2 BF28_319 IPR014284 RNA polymerase sigma-70 like domain BF28_319 IPR039425 RNA polymerase sigma-70 like BF28_319 IPR014294 RNA polymerase sigma-W, bacillaceae BF28_319 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site BF28_3190 IPR001763 Rhodanese-like domain BF28_3190 IPR023695 Thiosulfate sulfurtransferase, bacterial BF28_3190 IPR036873 Rhodanese-like domain superfamily BF28_3191 IPR023753 FAD/NAD(P)-binding domain BF28_3191 IPR036188 FAD/NAD(P)-binding domain superfamily BF28_3193 IPR029151 Periplasmic sensor-like domain superfamily BF28_3193 IPR033479 Double Cache domain 1 BF28_3193 IPR003660 HAMP domain BF28_3193 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain BF28_3194 IPR001633 EAL domain BF28_3194 IPR029787 Nucleotide cyclase BF28_3194 IPR005330 MHYT domain BF28_3194 IPR000160 GGDEF domain BF28_3194 IPR035919 EAL domain superfamily BF28_3196 IPR009057 Homeobox-like domain superfamily BF28_3196 IPR023772 DNA-binding HTH domain, TetR-type, conserved site BF28_3196 IPR001647 DNA-binding HTH domain, TetR-type BF28_3197 IPR003963 Bi-component toxin, staphylococci BF28_3197 IPR016183 Leukocidin/Hemolysin toxin BF28_3197 IPR036435 Leukocidin/porin MspA superfamily BF28_3197 IPR005831 Aerolysin/haemolysin toxin, conserved site BF28_3198 IPR001119 S-layer homology domain BF28_3198 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain BF28_32 IPR036967 Ribosomal protein S11 superfamily BF28_32 IPR018102 Ribosomal S11, conserved site BF28_32 IPR001971 Ribosomal protein S11 BF28_32 IPR019981 Ribosomal protein S11, bacterial-type BF28_3200 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily BF28_3200 IPR003709 Peptidase M15B BF28_3202 IPR010095 Transposase IS605, OrfB, C-terminal BF28_3202 IPR021027 Transposase, putative, helix-turn-helix domain BF28_3202 IPR001959 Probable transposase, IS891/IS1136/IS1341 BF28_3203 IPR001387 Cro/C1-type helix-turn-helix domain BF28_3203 IPR010982 Lambda repressor-like, DNA-binding domain superfamily BF28_3204 IPR019734 Tetratricopeptide repeat BF28_3204 IPR011990 Tetratricopeptide-like helical domain superfamily BF28_3204 IPR013026 Tetratricopeptide repeat-containing domain BF28_3204 IPR040702 Response regulator aspartate phosphatase, N-terminal BF28_3206 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type BF28_3206 IPR008334 5'-Nucleotidase, C-terminal BF28_3206 IPR029052 Metallo-dependent phosphatase-like BF28_3206 IPR036907 5'-Nucleotidase, C-terminal domain superfamily BF28_3206 IPR006146 5'-Nucleotidase, conserved site BF28_3206 IPR006179 5'-Nucleotidase/apyrase BF28_3206 IPR019931 LPXTG cell wall anchor domain BF28_3206 IPR041827 CpdB, N-terminal metallophosphatase domain BF28_3210 IPR014710 RmlC-like jelly roll fold BF28_3210 IPR024203 5-deoxy-glucuronate isomerase, IolB BF28_3210 IPR011051 RmlC-like cupin domain superfamily BF28_3210 IPR023770 5-deoxy-glucuronate isomerase, Bacilli BF28_3210 IPR021120 KduI/IolB isomerase BF28_3211 IPR000771 Fructose-bisphosphate aldolase, class-II BF28_3211 IPR013785 Aldolase-type TIM barrel BF28_3211 IPR011289 Fructose-1,6-bisphosphate aldolase, class 2 BF28_3212 IPR036237 Xylose isomerase-like superfamily BF28_3212 IPR023952 Inosose dehydratase BF28_3212 IPR013022 Xylose isomerase-like, TIM barrel domain BF28_3212 IPR030823 IolE/MocC family BF28_3213 IPR023757 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase, Firmicutes BF28_3213 IPR030817 3,5/4-Trihydroxycyclohexa-1,2-dione hydrolase BF28_3213 IPR029061 Thiamin diphosphate-binding fold BF28_3213 IPR012000 Thiamine pyrophosphate enzyme, central domain BF28_3213 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain BF28_3213 IPR000399 TPP-binding enzyme, conserved site BF28_3213 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding BF28_3213 IPR029035 DHS-like NAD/FAD-binding domain superfamily BF28_3214 IPR016161 Aldehyde/histidinol dehydrogenase BF28_3214 IPR016163 Aldehyde dehydrogenase, C-terminal BF28_3214 IPR016162 Aldehyde dehydrogenase, N-terminal BF28_3214 IPR015590 Aldehyde dehydrogenase domain BF28_3214 IPR010061 Methylmalonate-semialdehyde dehydrogenase BF28_3214 IPR023510 Methylmalonate-semialdehyde dehydrogenase, Gram-positive bacteria BF28_3214 IPR016160 Aldehyde dehydrogenase, cysteine active site BF28_3215 IPR029056 Ribokinase-like BF28_3215 IPR022841 5-dehydro-2-deoxygluconokinase, Firmicutes BF28_3215 IPR030830 5-Dehydro-2-deoxygluconokinase BF28_3215 IPR023314 5-Dehydro-2-deoxygluconokinase-like superfamily BF28_3215 IPR011611 Carbohydrate kinase PfkB BF28_3215 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site BF28_3216 IPR000683 Oxidoreductase, N-terminal BF28_3216 IPR004104 Oxidoreductase, C-terminal BF28_3216 IPR030827 Inositol 2-dehydrogenase BF28_3216 IPR036291 NAD(P)-binding domain superfamily BF28_3217 IPR020846 Major facilitator superfamily domain BF28_3217 IPR036259 MFS transporter superfamily BF28_3217 IPR011701 Major facilitator superfamily BF28_3217 IPR004748 Polyol permease BF28_3218 IPR000843 LacI-type HTH domain BF28_3218 IPR010982 Lambda repressor-like, DNA-binding domain superfamily BF28_3218 IPR028082 Periplasmic binding protein-like I BF28_3219 IPR033879 Undecaprenyl-diphosphatase BF28_3219 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase BF28_3219 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily BF28_3220 IPR023650 Beta-lactamase, class-A active site BF28_3220 IPR000871 Beta-lactamase, class-A BF28_3220 IPR012338 Beta-lactamase/transpeptidase-like BF28_3222 IPR036138 Penicillin-binding protein, dimerisation domain superfamily BF28_3222 IPR005311 Penicillin-binding protein, dimerisation domain BF28_3222 IPR012338 Beta-lactamase/transpeptidase-like BF28_3222 IPR001460 Penicillin-binding protein, transpeptidase BF28_3224 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 BF28_3224 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_3224 IPR013324 RNA polymerase sigma factor, region 3/4-like BF28_3224 IPR013325 RNA polymerase sigma factor, region 2 BF28_3224 IPR039425 RNA polymerase sigma-70 like BF28_3224 IPR014284 RNA polymerase sigma-70 like domain BF28_3224 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site BF28_3224 IPR007627 RNA polymerase sigma-70 region 2 BF28_3228 IPR002933 Peptidase M20 BF28_3228 IPR011650 Peptidase M20, dimerisation domain BF28_3228 IPR001160 Peptidase M20C, Xaa-His dipeptidase BF28_323 IPR003137 PA domain BF28_323 IPR007484 Peptidase M28 BF28_3233 IPR025940 Toxin SpoIISA, type II toxin-antitoxin system BF28_3234 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site BF28_3234 IPR029033 Histidine phosphatase superfamily BF28_3234 IPR013078 Histidine phosphatase superfamily, clade-1 BF28_3234 IPR005952 Phosphoglycerate mutase 1 BF28_3235 IPR036390 Winged helix DNA-binding domain superfamily BF28_3235 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_3235 IPR023187 Transcriptional regulator MarR-type, conserved site BF28_3235 IPR000835 MarR-type HTH domain BF28_3236 IPR012000 Thiamine pyrophosphate enzyme, central domain BF28_3236 IPR029061 Thiamin diphosphate-binding fold BF28_3236 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain BF28_3236 IPR000399 TPP-binding enzyme, conserved site BF28_3236 IPR012110 Thiamine pyrophosphate (TPP)-dependent enzyme BF28_3236 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding BF28_3236 IPR017764 Indole-3-pyruvate decarboxylase, Enterobacteriaceae BF28_3236 IPR029035 DHS-like NAD/FAD-binding domain superfamily BF28_3239 IPR015392 Domain of unknown function DUF1971 BF28_3239 IPR014710 RmlC-like jelly roll fold BF28_3239 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BF28_3239 IPR015985 Tellurite resistance methyltransferase TehB-like domain BF28_3239 IPR004537 Tellurite resistance methyltransferase, TehB BF28_3239 IPR014431 Tellurite resistance methyltransferase, TehB type-2 BF28_324 IPR018337 Cell wall/choline-binding repeat BF28_324 IPR003318 Glycoside hydrolase, family 70, catalytic domain BF28_324 IPR017853 Glycoside hydrolase superfamily BF28_324 IPR022263 KxYKxGKxW signal peptide BF28_324 IPR027636 Glucan-binding repeat BF28_3240 IPR003593 AAA+ ATPase domain BF28_3240 IPR003439 ABC transporter-like BF28_3240 IPR017871 ABC transporter, conserved site BF28_3240 IPR017911 ABC transporter, macrolide export, ATP-binding domain BF28_3240 IPR025857 MacB-like periplasmic core domain BF28_3240 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_3240 IPR003838 ABC transporter permease protein domain BF28_3243 IPR009057 Homeobox-like domain superfamily BF28_3243 IPR001647 DNA-binding HTH domain, TetR-type BF28_3243 IPR041490 HTH-type transcriptional repressor KstR2, C-terminal BF28_3243 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily BF28_3245 IPR014014 RNA helicase, DEAD-box type, Q motif BF28_3245 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_3245 IPR001650 Helicase, C-terminal BF28_3245 IPR014001 Helicase superfamily 1/2, ATP-binding domain BF28_3245 IPR011545 DEAD/DEAH box helicase domain BF28_3247 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain BF28_3247 IPR001279 Metallo-beta-lactamase BF28_3247 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BF28_3247 IPR035680 Hydroxyacylglutathione hydrolase, MBL domain BF28_3247 IPR017782 Hydroxyacylglutathione hydrolase BF28_325 IPR000994 Peptidase M24 BF28_325 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 BF28_325 IPR036005 Creatinase/aminopeptidase-like BF28_325 IPR001714 Peptidase M24, methionine aminopeptidase BF28_3250 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site BF28_3250 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme BF28_3250 IPR001926 Pyridoxal-phosphate dependent enzyme BF28_3250 IPR005789 Threonine dehydratase, catabolic BF28_3251 IPR000192 Aminotransferase class V domain BF28_3251 IPR012703 2-aminoethylphosphonate--pyruvate transaminase BF28_3251 IPR015424 Pyridoxal phosphate-dependent transferase BF28_3251 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase BF28_3251 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BF28_3251 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BF28_3252 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY BF28_3253 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type BF28_3254 IPR005338 Anhydro-N-acetylmuramic acid kinase BF28_3256 IPR004796 Phosphotransferase system, cellobiose-type IIC component BF28_3256 IPR003352 Phosphotransferase system, EIIC BF28_3256 IPR004501 Phosphotransferase system, EIIC component, type 3 BF28_3258 IPR013785 Aldolase-type TIM barrel BF28_3258 IPR003790 Glycosyl hydrolase-like 10 BF28_3258 IPR017853 Glycoside hydrolase superfamily BF28_3258 IPR013783 Immunoglobulin-like fold BF28_326 IPR017871 ABC transporter, conserved site BF28_326 IPR003593 AAA+ ATPase domain BF28_326 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_326 IPR003439 ABC transporter-like BF28_3263 IPR014284 RNA polymerase sigma-70 like domain BF28_3263 IPR032710 NTF2-like domain superfamily BF28_3263 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_3263 IPR037401 SnoaL-like domain BF28_3263 IPR007627 RNA polymerase sigma-70 region 2 BF28_3263 IPR013324 RNA polymerase sigma factor, region 3/4-like BF28_3263 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 BF28_3263 IPR013325 RNA polymerase sigma factor, region 2 BF28_3266 IPR033655 RelA, TGS domain BF28_3266 IPR012675 Beta-grasp domain superfamily BF28_3266 IPR007685 RelA/SpoT BF28_3266 IPR012676 TGS-like BF28_3266 IPR003607 HD/PDEase domain BF28_3266 IPR004095 TGS BF28_3266 IPR004811 RelA/SpoT family BF28_3266 IPR002912 ACT domain BF28_327 IPR000412 ABC-2 transporter BF28_3273 IPR010982 Lambda repressor-like, DNA-binding domain superfamily BF28_3273 IPR011051 RmlC-like cupin domain superfamily BF28_3273 IPR014710 RmlC-like jelly roll fold BF28_3273 IPR013096 Cupin 2, conserved barrel BF28_3273 IPR001387 Cro/C1-type helix-turn-helix domain BF28_3274 IPR001123 Amino acid exporter protein, LeuE-type BF28_3277 IPR011527 ABC transporter type 1, transmembrane domain BF28_3277 IPR039421 Type I protein exporter BF28_3277 IPR003439 ABC transporter-like BF28_3277 IPR017871 ABC transporter, conserved site BF28_3277 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_3277 IPR036640 ABC transporter type 1, transmembrane domain superfamily BF28_3277 IPR003593 AAA+ ATPase domain BF28_3278 IPR003593 AAA+ ATPase domain BF28_3278 IPR003439 ABC transporter-like BF28_3278 IPR017871 ABC transporter, conserved site BF28_3278 IPR011527 ABC transporter type 1, transmembrane domain BF28_3278 IPR036640 ABC transporter type 1, transmembrane domain superfamily BF28_3278 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_3278 IPR039421 Type I protein exporter BF28_328 IPR003594 Histidine kinase/HSP90-like ATPase BF28_328 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain BF28_328 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BF28_3281 IPR005163 3-alpha domain BF28_3281 IPR005302 Molybdenum cofactor sulfurase, C-terminal BF28_3281 IPR011037 Pyruvate kinase-like, insert domain superfamily BF28_3282 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_3282 IPR037403 HTH-type transcriptional regulator CynR, PBP2 domain BF28_3282 IPR005119 LysR, substrate-binding BF28_3282 IPR000847 Transcription regulator HTH, LysR BF28_3282 IPR036390 Winged helix DNA-binding domain superfamily BF28_3285 IPR012280 Semialdehyde dehydrogenase, dimerisation domain BF28_3285 IPR000534 Semialdehyde dehydrogenase, NAD-binding BF28_3285 IPR036291 NAD(P)-binding domain superfamily BF28_3285 IPR012080 Aspartate-semialdehyde dehydrogenase BF28_3285 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site BF28_3285 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type BF28_3286 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_3286 IPR000847 Transcription regulator HTH, LysR BF28_3286 IPR005119 LysR, substrate-binding BF28_3286 IPR036390 Winged helix DNA-binding domain superfamily BF28_3287 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG BF28_3287 IPR011701 Major facilitator superfamily BF28_3287 IPR005829 Sugar transporter, conserved site BF28_3287 IPR004734 Multidrug resistance protein BF28_3287 IPR036259 MFS transporter superfamily BF28_3287 IPR020846 Major facilitator superfamily domain BF28_3288 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_3288 IPR023187 Transcriptional regulator MarR-type, conserved site BF28_3288 IPR000835 MarR-type HTH domain BF28_3288 IPR036390 Winged helix DNA-binding domain superfamily BF28_329 IPR016032 Signal transduction response regulator, C-terminal effector BF28_329 IPR000792 Transcription regulator LuxR, C-terminal BF28_329 IPR011006 CheY-like superfamily BF28_329 IPR001789 Signal transduction response regulator, receiver domain BF28_3290 IPR023696 Ureohydrolase domain superfamily BF28_3293 IPR012156 Cold shock, CspA BF28_3293 IPR011129 Cold shock domain BF28_3293 IPR012340 Nucleic acid-binding, OB-fold BF28_3293 IPR019844 Cold-shock (CSD) domain BF28_3293 IPR002059 Cold-shock protein, DNA-binding BF28_3295 IPR016181 Acyl-CoA N-acyltransferase BF28_3295 IPR000182 GNAT domain BF28_33 IPR010979 Ribosomal protein S13-like, H2TH BF28_33 IPR018269 Ribosomal protein S13, conserved site BF28_33 IPR027437 30s ribosomal protein S13, C-terminal BF28_33 IPR001892 Ribosomal protein S13 BF28_33 IPR019980 Ribosomal protein S13, bacterial-type BF28_3305 IPR000182 GNAT domain BF28_3305 IPR016181 Acyl-CoA N-acyltransferase BF28_3308 IPR001707 Chloramphenicol acetyltransferase BF28_3308 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily BF28_3308 IPR018372 Chloramphenicol acetyltransferase, active site BF28_3310 IPR000731 Sterol-sensing domain BF28_3310 IPR004869 Membrane transport protein MMPL domain BF28_3311 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) BF28_3311 IPR006195 Aminoacyl-tRNA synthetase, class II BF28_3311 IPR002317 Serine-tRNA ligase, type1 BF28_3311 IPR015866 Serine-tRNA synthetase, type1, N-terminal BF28_3311 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm BF28_3311 IPR033729 Serine-tRNA ligase catalytic core domain BF28_3311 IPR042103 Serine-tRNA synthetase, type1, N-terminal domain superfamily BF28_3312 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain BF28_3312 IPR035680 Hydroxyacylglutathione hydrolase, MBL domain BF28_3312 IPR017782 Hydroxyacylglutathione hydrolase BF28_3312 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BF28_3312 IPR001279 Metallo-beta-lactamase BF28_3319 IPR041698 Methyltransferase domain 25 BF28_3319 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BF28_332 IPR000160 GGDEF domain BF28_332 IPR035919 EAL domain superfamily BF28_332 IPR001633 EAL domain BF28_332 IPR005330 MHYT domain BF28_332 IPR029787 Nucleotide cyclase BF28_332 IPR035965 PAS domain superfamily BF28_3321 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding BF28_3321 IPR000399 TPP-binding enzyme, conserved site BF28_3321 IPR029061 Thiamin diphosphate-binding fold BF28_3321 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain BF28_3321 IPR012000 Thiamine pyrophosphate enzyme, central domain BF28_3321 IPR029035 DHS-like NAD/FAD-binding domain superfamily BF28_3324 IPR004751 Drug antiporter protein BF28_3324 IPR036259 MFS transporter superfamily BF28_3324 IPR011701 Major facilitator superfamily BF28_3324 IPR020846 Major facilitator superfamily domain BF28_3325 IPR022742 Serine aminopeptidase, S33 BF28_3325 IPR029058 Alpha/Beta hydrolase fold BF28_3325 IPR002410 Peptidase S33 BF28_3327 IPR003439 ABC transporter-like BF28_3327 IPR003593 AAA+ ATPase domain BF28_3327 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_3328 IPR012675 Beta-grasp domain superfamily BF28_3328 IPR036621 Anticodon-binding domain superfamily BF28_3328 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily BF28_3328 IPR033728 Threonine-tRNA ligase catalytic core domain BF28_3328 IPR012947 Threonyl/alanyl tRNA synthetase, SAD BF28_3328 IPR012676 TGS-like BF28_3328 IPR002320 Threonine-tRNA ligase, class IIa BF28_3328 IPR006195 Aminoacyl-tRNA synthetase, class II BF28_3328 IPR004154 Anticodon-binding BF28_3328 IPR004095 TGS BF28_3328 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) BF28_3329 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain BF28_3329 IPR006145 Pseudouridine synthase, RsuA/RluA BF28_3329 IPR036986 RNA-binding S4 domain superfamily BF28_3329 IPR002942 RNA-binding S4 domain BF28_3329 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site BF28_3329 IPR020103 Pseudouridine synthase, catalytic domain superfamily BF28_3329 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F BF28_333 IPR023520 UV-endonuclease UvdE, bacterial BF28_333 IPR004601 UV-endonuclease UvdE BF28_333 IPR036237 Xylose isomerase-like superfamily BF28_3330 IPR011008 Dimeric alpha-beta barrel BF28_3330 IPR032555 Domain of unknown function DUF4937 BF28_3333 IPR001463 Sodium:alanine symporter BF28_3334 IPR022398 Peptidase S8, subtilisin, His-active site BF28_3334 IPR023828 Peptidase S8, subtilisin, Ser-active site BF28_3334 IPR015500 Peptidase S8, subtilisin-related BF28_3334 IPR023827 Peptidase S8, subtilisin, Asp-active site BF28_3334 IPR036852 Peptidase S8/S53 domain superfamily BF28_3334 IPR034084 Thermitase-like, domain BF28_3334 IPR000209 Peptidase S8/S53 domain BF28_3335 IPR007837 DNA damage-inducible protein DinB BF28_3335 IPR034660 DinB/YfiT-like putative metalloenzymes BF28_3337 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily BF28_3337 IPR000119 Histone-like DNA-binding protein BF28_3337 IPR020816 Histone-like DNA-binding protein, conserved site BF28_334 IPR022924 Cardiolipin synthase BF28_334 IPR025202 Phospholipase D-like domain BF28_334 IPR001736 Phospholipase D/Transphosphatidylase BF28_3340 IPR011701 Major facilitator superfamily BF28_3340 IPR004638 Drug resistance transporter EmrB-like BF28_3340 IPR036259 MFS transporter superfamily BF28_3340 IPR020846 Major facilitator superfamily domain BF28_3341 IPR005153 MbtH-like domain BF28_3341 IPR037407 MbtH-like protein BF28_3341 IPR038020 MbtH-like domain superfamily BF28_3342 IPR020802 Polyketide synthase, thioesterase domain BF28_3342 IPR009081 Phosphopantetheine binding ACP domain BF28_3342 IPR001031 Thioesterase BF28_3342 IPR042099 AMP-dependent synthetase-like superfamily BF28_3342 IPR000873 AMP-dependent synthetase/ligase BF28_3342 IPR020806 Polyketide synthase, phosphopantetheine-binding domain BF28_3342 IPR020845 AMP-binding, conserved site BF28_3342 IPR025110 AMP-binding enzyme, C-terminal domain BF28_3342 IPR036736 ACP-like superfamily BF28_3342 IPR029058 Alpha/Beta hydrolase fold BF28_3342 IPR010071 Amino acid adenylation domain BF28_3342 IPR001242 Condensation domain BF28_3342 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily BF28_3343 IPR036380 Isochorismatase-like superfamily BF28_3343 IPR000868 Isochorismatase-like BF28_3343 IPR009081 Phosphopantetheine binding ACP domain BF28_3343 IPR016291 Isochorismatase BF28_3343 IPR036736 ACP-like superfamily BF28_3344 IPR011963 2,3-dihydroxybenzoate-AMP ligase BF28_3344 IPR000873 AMP-dependent synthetase/ligase BF28_3344 IPR020845 AMP-binding, conserved site BF28_3344 IPR025110 AMP-binding enzyme, C-terminal domain BF28_3345 IPR004561 Isochorismate synthase BF28_3345 IPR005801 ADC synthase BF28_3345 IPR015890 Chorismate-utilising enzyme, C-terminal BF28_3346 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase BF28_3346 IPR002347 Short-chain dehydrogenase/reductase SDR BF28_3346 IPR020904 Short-chain dehydrogenase/reductase, conserved site BF28_3346 IPR036291 NAD(P)-binding domain superfamily BF28_3347 IPR004741 Oxalate/formate antiporter family transporter BF28_3347 IPR011701 Major facilitator superfamily BF28_3347 IPR020846 Major facilitator superfamily domain BF28_3347 IPR036259 MFS transporter superfamily BF28_335 IPR036197 NarG-like superfamily BF28_335 IPR009051 Alpha-helical ferredoxin BF28_335 IPR004017 Cysteine-rich domain BF28_335 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BF28_335 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BF28_3350 IPR001845 HTH ArsR-type DNA-binding domain BF28_3350 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_3350 IPR036390 Winged helix DNA-binding domain superfamily BF28_3350 IPR011991 ArsR-like helix-turn-helix domain BF28_3351 IPR038729 Rad50/SbcC-type AAA domain BF28_3351 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_3352 IPR004593 Nuclease SbcCD subunit D BF28_3352 IPR026843 Nuclease SbcCD subunit D, C-terminal domain BF28_3352 IPR041796 Mre11 nuclease, N-terminal metallophosphatase domain BF28_3352 IPR029052 Metallo-dependent phosphatase-like BF28_3352 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type BF28_3353 IPR015947 PUA-like superfamily BF28_3353 IPR019699 Protein of unknown function DUF2584 BF28_3355 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site BF28_3355 IPR001753 Enoyl-CoA hydratase/isomerase BF28_3355 IPR014748 Enoyl-CoA hydratase, C-terminal BF28_3355 IPR029045 ClpP/crotonase-like domain superfamily BF28_3356 IPR001123 Amino acid exporter protein, LeuE-type BF28_3356 IPR004778 Homoserine/Threonine efflux protein BF28_3357 IPR016162 Aldehyde dehydrogenase, N-terminal BF28_3357 IPR010061 Methylmalonate-semialdehyde dehydrogenase BF28_3357 IPR016161 Aldehyde/histidinol dehydrogenase BF28_3357 IPR015590 Aldehyde dehydrogenase domain BF28_3357 IPR023510 Methylmalonate-semialdehyde dehydrogenase, Gram-positive bacteria BF28_3357 IPR016163 Aldehyde dehydrogenase, C-terminal BF28_3357 IPR016160 Aldehyde dehydrogenase, cysteine active site BF28_3358 IPR036291 NAD(P)-binding domain superfamily BF28_3358 IPR015815 3-hydroxyisobutyrate dehydrogenase-related BF28_3358 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding BF28_3358 IPR013328 6-phosphogluconate dehydrogenase, domain 2 BF28_3358 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily BF28_3358 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site BF28_3358 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain BF28_3358 IPR006398 2-hydroxy-3-oxopropionate reductase BF28_3359 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal BF28_3359 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal BF28_3359 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain BF28_3359 IPR006089 Acyl-CoA dehydrogenase, conserved site BF28_3359 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal BF28_3359 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily BF28_3359 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily BF28_336 IPR020616 Thiolase, N-terminal BF28_336 IPR002155 Thiolase BF28_336 IPR020613 Thiolase, conserved site BF28_336 IPR020610 Thiolase, active site BF28_336 IPR016039 Thiolase-like BF28_336 IPR020617 Thiolase, C-terminal BF28_336 IPR020615 Thiolase, acyl-enzyme intermediate active site BF28_3360 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site BF28_3360 IPR012695 2-methylisocitrate lyase BF28_3360 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily BF28_3360 IPR040442 Pyruvate kinase-like domain superfamily BF28_3360 IPR039556 ICL/PEPM domain BF28_3361 IPR036148 MmgE/PrpD superfamily BF28_3361 IPR012705 2-methylcitrate dehydratase PrpD BF28_3361 IPR042188 MmgE/PrpD superfamily, domain 2 BF28_3361 IPR005656 MmgE/PrpD BF28_3361 IPR042183 MmgE/PrpD superfamily, domain 1 BF28_3362 IPR016142 Citrate synthase-like, large alpha subdomain BF28_3362 IPR016143 Citrate synthase-like, small alpha subdomain BF28_3362 IPR002020 Citrate synthase BF28_3362 IPR036969 Citrate synthase superfamily BF28_3362 IPR019810 Citrate synthase active site BF28_3362 IPR024176 Citrate synthase, bacterial-type BF28_3363 IPR008326 Uncharacterised conserved protein UCP034852 BF28_3363 IPR000361 FeS cluster biogenesis BF28_3363 IPR035903 HesB-like domain superfamily BF28_3364 IPR036259 MFS transporter superfamily BF28_3364 IPR020846 Major facilitator superfamily domain BF28_3364 IPR011701 Major facilitator superfamily BF28_3365 IPR001460 Penicillin-binding protein, transpeptidase BF28_3365 IPR036950 Penicillin binding protein transglycosylase domain BF28_3365 IPR023346 Lysozyme-like domain superfamily BF28_3365 IPR001264 Glycosyl transferase, family 51 BF28_3365 IPR013783 Immunoglobulin-like fold BF28_3365 IPR036116 Fibronectin type III superfamily BF28_3365 IPR003961 Fibronectin type III BF28_3365 IPR012338 Beta-lactamase/transpeptidase-like BF28_3369 IPR019618 Spore germination protein GerPA/GerPF BF28_337 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site BF28_337 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal BF28_337 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily BF28_337 IPR013328 6-phosphogluconate dehydrogenase, domain 2 BF28_337 IPR036291 NAD(P)-binding domain superfamily BF28_337 IPR022694 3-hydroxyacyl-CoA dehydrogenase BF28_337 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding BF28_3373 IPR027304 Trigger factor/SurA domain superfamily BF28_3373 IPR023059 Foldase protein PrsA BF28_3373 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type BF28_338 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily BF28_338 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily BF28_338 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal BF28_338 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal BF28_338 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain BF28_338 IPR006089 Acyl-CoA dehydrogenase, conserved site BF28_338 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal BF28_3388 IPR013766 Thioredoxin domain BF28_3388 IPR005746 Thioredoxin BF28_3388 IPR036249 Thioredoxin-like superfamily BF28_3389 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase BF28_3389 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily BF28_339 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal BF28_339 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily BF28_339 IPR006089 Acyl-CoA dehydrogenase, conserved site BF28_339 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily BF28_339 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal BF28_339 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal BF28_339 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain BF28_3390 IPR002524 Cation efflux protein BF28_3390 IPR036837 Cation efflux protein, cytoplasmic domain superfamily BF28_3390 IPR027470 Cation efflux protein, cytoplasmic domain BF28_3390 IPR027469 Cation efflux transmembrane domain superfamily BF28_3391 IPR009776 Sporulation stage 0, protein M BF28_3391 IPR014756 Immunoglobulin E-set BF28_3391 IPR014752 Arrestin, C-terminal BF28_3392 IPR003646 SH3-like domain, bacterial-type BF28_3392 IPR000719 Protein kinase domain BF28_3392 IPR008271 Serine/threonine-protein kinase, active site BF28_3392 IPR011009 Protein kinase-like domain superfamily BF28_3392 IPR017441 Protein kinase, ATP binding site BF28_3394 IPR025545 YozD-like protein BF28_3397 IPR036806 YozE SAM-like superfamily BF28_3397 IPR010673 Protein of unknown function UPF0346 BF28_3397 IPR023089 YozE SAM-like domain BF28_3398 IPR022451 Conserved hypothetical protein CHP03829, YokU BF28_3398 IPR022453 Zinc finger, MqsA-type BF28_3399 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase BF28_3399 IPR025895 Lysine-2,3-aminomutase, C-terminal domain BF28_3399 IPR013785 Aldolase-type TIM barrel BF28_3399 IPR022459 Lysine-2,3-aminomutase BF28_34 IPR035977 Ribosomal protein L36 superfamily BF28_34 IPR000473 Ribosomal protein L36 BF28_3400 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 BF28_3400 IPR025944 Sigma-54 interaction domain, conserved site BF28_3400 IPR002197 DNA binding HTH domain, Fis-type BF28_3400 IPR035965 PAS domain superfamily BF28_3400 IPR002078 RNA polymerase sigma factor 54 interaction domain BF28_3400 IPR009057 Homeobox-like domain superfamily BF28_3400 IPR000014 PAS domain BF28_3400 IPR003593 AAA+ ATPase domain BF28_3400 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 BF28_3400 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_3401 IPR016181 Acyl-CoA N-acyltransferase BF28_3401 IPR022525 Beta-lysine N-acetyltransferase BF28_3401 IPR000182 GNAT domain BF28_3402 IPR010182 N-formyl-4-amino-5-aminomethyl-2-methylpyrimidine deformylase/Succinyl-diaminopimelate desuccinylase BF28_3402 IPR036264 Bacterial exopeptidase dimerisation domain BF28_3402 IPR002933 Peptidase M20 BF28_3402 IPR011650 Peptidase M20, dimerisation domain BF28_3403 IPR037171 NagB/RpiA transferase-like BF28_3403 IPR012791 3-oxoacid CoA-transferase, subunit B BF28_3403 IPR004165 Coenzyme A transferase family I BF28_3404 IPR004163 Coenzyme A transferase binding site BF28_3404 IPR012792 3-oxoacid CoA-transferase, subunit A BF28_3404 IPR037171 NagB/RpiA transferase-like BF28_3404 IPR004165 Coenzyme A transferase family I BF28_3405 IPR005814 Aminotransferase class-III BF28_3405 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BF28_3405 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BF28_3405 IPR015424 Pyridoxal phosphate-dependent transferase BF28_3408 IPR038284 Histidine kinase, N-terminal domain superfamily BF28_3408 IPR018984 Histidine kinase, N-terminal BF28_3409 IPR029064 50S ribosomal protein L30e-like BF28_3409 IPR012543 Protein of unknown function DUF1694 BF28_341 IPR029757 DNA-directed RNA polymerase subunit delta BF28_341 IPR038087 DNA-directed RNA polymerase subunit delta domain superfamily BF28_341 IPR007759 HB1/Asxl, restriction endonuclease HTH domain BF28_3410 IPR016162 Aldehyde dehydrogenase, N-terminal BF28_3410 IPR029510 Aldehyde dehydrogenase, glutamic acid active site BF28_3410 IPR016163 Aldehyde dehydrogenase, C-terminal BF28_3410 IPR015590 Aldehyde dehydrogenase domain BF28_3410 IPR016161 Aldehyde/histidinol dehydrogenase BF28_3411 IPR005170 Transporter-associated domain BF28_3411 IPR036318 FAD-binding, type PCMH-like superfamily BF28_3411 IPR016169 FAD-binding, type PCMH, subdomain 2 BF28_3411 IPR000644 CBS domain BF28_3411 IPR002550 CNNM, transmembrane domain BF28_3412 IPR023522 Chromosome-anchoring protein RacA BF28_3417 IPR004754 Amino acid antiporter BF28_3417 IPR002293 Amino acid/polyamine transporter I BF28_3417 IPR022461 Arginine/ornithine antiporter BF28_3418 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BF28_3418 IPR035906 MetI-like superfamily BF28_3419 IPR000644 CBS domain BF28_3419 IPR003593 AAA+ ATPase domain BF28_3419 IPR003439 ABC transporter-like BF28_3419 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_3419 IPR005892 Glycine betaine transport ATP-binding subunit BF28_3419 IPR017871 ABC transporter, conserved site BF28_342 IPR017926 Glutamine amidotransferase BF28_342 IPR017456 CTP synthase, N-terminal BF28_342 IPR004468 CTP synthase BF28_342 IPR029062 Class I glutamine amidotransferase-like BF28_342 IPR033828 CTP synthase GATase domain BF28_342 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_3422 IPR029039 Flavoprotein-like superfamily BF28_3422 IPR005025 NADPH-dependent FMN reductase-like BF28_3425 IPR024250 Protein of unknown function DUF2711 BF28_3427 IPR012338 Beta-lactamase/transpeptidase-like BF28_3427 IPR001466 Beta-lactamase-related BF28_343 IPR019676 Domain of unknown function (DUF2529) BF28_3430 IPR013154 Alcohol dehydrogenase, N-terminal BF28_3430 IPR013149 Alcohol dehydrogenase, C-terminal BF28_3430 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site BF28_3430 IPR011032 GroES-like superfamily BF28_3430 IPR036291 NAD(P)-binding domain superfamily BF28_3430 IPR020843 Polyketide synthase, enoylreductase domain BF28_3431 IPR001347 Sugar isomerase (SIS) BF28_3431 IPR009057 Homeobox-like domain superfamily BF28_3431 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_3431 IPR000281 Helix-turn-helix protein RpiR BF28_3431 IPR035472 RpiR-like, SIS domain BF28_3432 IPR011006 CheY-like superfamily BF28_3432 IPR000792 Transcription regulator LuxR, C-terminal BF28_3432 IPR016032 Signal transduction response regulator, C-terminal effector BF28_3432 IPR001789 Signal transduction response regulator, receiver domain BF28_3433 IPR029016 GAF-like domain superfamily BF28_3433 IPR003594 Histidine kinase/HSP90-like ATPase BF28_3433 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BF28_3433 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain BF28_3433 IPR003018 GAF domain BF28_3434 IPR006685 Mechanosensitive ion channel MscS BF28_3434 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 BF28_3434 IPR010920 LSM domain superfamily BF28_3434 IPR023408 Mechanosensitive ion channel MscS domain superfamily BF28_3435 IPR002068 Alpha crystallin/Hsp20 domain BF28_3435 IPR008978 HSP20-like chaperone BF28_3435 IPR031107 Small heat shock protein HSP20 BF28_3436 IPR000086 NUDIX hydrolase domain BF28_3436 IPR015797 NUDIX hydrolase-like domain superfamily BF28_3437 IPR036380 Isochorismatase-like superfamily BF28_3437 IPR000868 Isochorismatase-like BF28_344 IPR011006 CheY-like superfamily BF28_344 IPR001789 Signal transduction response regulator, receiver domain BF28_3440 IPR000415 Nitroreductase-like BF28_3440 IPR029479 Nitroreductase BF28_3441 IPR036038 Aminotransferase-like, PLP-dependent enzymes BF28_3441 IPR018300 Aminotransferase, class IV, conserved site BF28_3441 IPR001544 Aminotransferase class IV BF28_3441 IPR005784 D-amino acid aminotransferase BF28_3442 IPR002491 ABC transporter periplasmic binding domain BF28_3446 IPR001962 Asparagine synthase BF28_3446 IPR029055 Nucleophile aminohydrolases, N-terminal BF28_3446 IPR033738 Asparagine synthase, N-terminal domain BF28_3446 IPR017932 Glutamine amidotransferase type 2 domain BF28_3446 IPR006426 Asparagine synthase, glutamine-hydrolyzing BF28_3447 IPR031107 Small heat shock protein HSP20 BF28_3447 IPR002068 Alpha crystallin/Hsp20 domain BF28_3447 IPR008978 HSP20-like chaperone BF28_3448 IPR003782 Copper chaperone SCO1/SenC BF28_3448 IPR013766 Thioredoxin domain BF28_3448 IPR036249 Thioredoxin-like superfamily BF28_3449 IPR022877 Protein of unknown funcion UPF0173 BF28_3449 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BF28_3449 IPR001279 Metallo-beta-lactamase BF28_345 IPR011289 Fructose-1,6-bisphosphate aldolase, class 2 BF28_345 IPR000771 Fructose-bisphosphate aldolase, class-II BF28_345 IPR013785 Aldolase-type TIM barrel BF28_3450 IPR003797 DegV BF28_3452 IPR002033 Sec-independent periplasmic protein translocase TatC BF28_3452 IPR019820 Sec-independent periplasmic protein translocase, conserved site BF28_3453 IPR006312 Sec-independent protein translocase protein TatA/E BF28_3453 IPR003369 Sec-independent protein translocase protein TatA/B/E BF28_3454 IPR005744 Hly-III BF28_3454 IPR004254 AdipoR/Haemolysin-III-related BF28_3455 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase BF28_3455 IPR002123 Phospholipid/glycerol acyltransferase BF28_3456 IPR029039 Flavoprotein-like superfamily BF28_3456 IPR003680 Flavodoxin-like fold BF28_3456 IPR023048 NADH-azoreductase, FMN-dependent BF28_3457 IPR007887 NTF2-like N-terminal transpeptidase BF28_3457 IPR036138 Penicillin-binding protein, dimerisation domain superfamily BF28_3457 IPR005311 Penicillin-binding protein, dimerisation domain BF28_3457 IPR001460 Penicillin-binding protein, transpeptidase BF28_3457 IPR012338 Beta-lactamase/transpeptidase-like BF28_3457 IPR032710 NTF2-like domain superfamily BF28_3458 IPR012259 Dihydrofolate reductase BF28_3458 IPR001796 Dihydrofolate reductase domain BF28_3458 IPR017925 Dihydrofolate reductase conserved site BF28_3458 IPR024072 Dihydrofolate reductase-like domain superfamily BF28_3459 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain BF28_3459 IPR000398 Thymidylate synthase BF28_3459 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily BF28_3459 IPR020940 Thymidylate synthase, active site BF28_346 IPR001986 Enolpyruvate transferase domain BF28_346 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta BF28_346 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase BF28_346 IPR036968 Enolpyruvate transferase domain superfamily BF28_3461 IPR023645 D-aminopeptidase BF28_3461 IPR027279 D-aminopeptidase/lipoprotein domain superfamily BF28_3461 IPR012338 Beta-lactamase/transpeptidase-like BF28_3461 IPR001466 Beta-lactamase-related BF28_3461 IPR012856 D-aminopeptidase, domain B BF28_3465 IPR036412 HAD-like superfamily BF28_3465 IPR023198 Phosphoglycolate phosphatase-like, domain 2 BF28_3465 IPR023214 HAD superfamily BF28_3465 IPR006439 HAD hydrolase, subfamily IA BF28_3465 IPR041492 Haloacid dehalogenase-like hydrolase BF28_3466 IPR025616 YpjP-like protein BF28_3467 IPR010288 Bacterial ABC transporter EcsB BF28_3468 IPR003593 AAA+ ATPase domain BF28_3468 IPR003439 ABC transporter-like BF28_3468 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_3468 IPR017871 ABC transporter, conserved site BF28_347 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase BF28_3470 IPR023214 HAD superfamily BF28_3470 IPR006549 HAD-superfamily hydrolase,subfamily IIIA BF28_3470 IPR036412 HAD-like superfamily BF28_3470 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase BF28_3470 IPR006543 Histidinol-phosphate phosphatase BF28_3471 IPR000182 GNAT domain BF28_3471 IPR016181 Acyl-CoA N-acyltransferase BF28_3472 IPR040372 YaeB-like BF28_3472 IPR036414 YaeB, N-terminal domain superfamily BF28_3472 IPR036413 YaeB-like superfamily BF28_3472 IPR023370 TrmO-like, N-terminal domain BF28_3472 IPR023368 Uncharacterised protein family UPF0066, conserved site BF28_3473 IPR004380 Aspartate racemase BF28_3473 IPR033134 Asp/Glu racemase, active site 2 BF28_3473 IPR018187 Asp/Glu racemase, active site 1 BF28_3473 IPR015942 Asp/Glu/hydantoin racemase BF28_3473 IPR001920 Asp/Glu racemase BF28_3474 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA BF28_3474 IPR039697 Iron-type alcohol dehydrogenase-like BF28_3474 IPR018211 Alcohol dehydrogenase, iron-type, conserved site BF28_3475 IPR003474 Gluconate transporter BF28_3476 IPR023198 Phosphoglycolate phosphatase-like, domain 2 BF28_3476 IPR023214 HAD superfamily BF28_3476 IPR041492 Haloacid dehalogenase-like hydrolase BF28_3476 IPR036412 HAD-like superfamily BF28_3477 IPR021260 Lipid II flippase Amj BF28_348 IPR011129 Cold shock domain BF28_348 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_348 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain BF28_348 IPR041703 Transcription termination factor Rho, ATP binding domain BF28_348 IPR012340 Nucleic acid-binding, OB-fold BF28_348 IPR011112 Rho termination factor, N-terminal BF28_348 IPR003593 AAA+ ATPase domain BF28_348 IPR036269 Rho termination factor, N-terminal domain superfamily BF28_348 IPR004665 Transcription termination factor Rho BF28_348 IPR011113 Rho termination factor, RNA-binding domain BF28_3480 IPR037272 Sodium:neurotransmitter symporter superfamily BF28_3480 IPR000175 Sodium:neurotransmitter symporter BF28_349 IPR042105 Ribosomal protein L31 superfamily BF28_349 IPR002150 Ribosomal protein L31 BF28_349 IPR034704 L28p-like BF28_349 IPR027493 Ribosomal protein L31 type B BF28_3493 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_3493 IPR003593 AAA+ ATPase domain BF28_3493 IPR023839 Firmicutes EssC, C-terminal BF28_3493 IPR022206 Firmicutes EssC, N-terminal BF28_3493 IPR002543 FtsK domain BF28_3497 IPR004523 Aspartate-tRNA synthetase, type 2 BF28_3497 IPR006195 Aminoacyl-tRNA synthetase, class II BF28_3497 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) BF28_3497 IPR012340 Nucleic acid-binding, OB-fold BF28_3497 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb BF28_3497 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type BF28_3498 IPR036565 Mur-like, catalytic domain superfamily BF28_3498 IPR004101 Mur ligase, C-terminal BF28_3498 IPR036615 Mur ligase, C-terminal domain superfamily BF28_3498 IPR013221 Mur ligase, central BF28_3498 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase BF28_3498 IPR035911 MurE/MurF, N-terminal BF28_3498 IPR000713 Mur ligase, N-terminal catalytic domain BF28_35 IPR006196 RNA-binding domain, S1, IF1 type BF28_35 IPR004368 Translation initiation factor IF-1 BF28_35 IPR012340 Nucleic acid-binding, OB-fold BF28_35 IPR022967 RNA-binding domain, S1 BF28_350 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_350 IPR020633 Thymidine kinase, conserved site BF28_350 IPR001267 Thymidine kinase BF28_3501 IPR002300 Aminoacyl-tRNA synthetase, class Ia BF28_3501 IPR033709 Isoleucyl tRNA synthetase type 2, anticodon-binding domain BF28_3501 IPR002301 Isoleucine-tRNA ligase BF28_3501 IPR023586 Isoleucine-tRNA ligase, type 2 BF28_3501 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding BF28_3501 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BF28_3501 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding BF28_3501 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain BF28_3501 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site BF28_3504 IPR001278 Arginine-tRNA ligase BF28_3504 IPR005148 Arginyl tRNA synthetase N-terminal domain BF28_3504 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BF28_3504 IPR008909 DALR anticodon binding BF28_3504 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding BF28_3504 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily BF28_3504 IPR035684 Arginyl-tRNA synthetase, catalytic core domain BF28_3505 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BF28_3505 IPR007536 Ribosomal RNA small subunit methyltransferase J BF28_3506 IPR009474 Putative bacilliredoxin, YphP/YqiW family BF28_3506 IPR036249 Thioredoxin-like superfamily BF28_3508 IPR011989 Armadillo-like helical BF28_3508 IPR025989 Virulence factor domain BF28_3508 IPR016024 Armadillo-type fold BF28_3508 IPR014824 Scaffold protein Nfu/NifU, N-terminal BF28_3508 IPR036498 Scaffold protein Nfu/NifU, N-terminal domain superfamily BF28_3508 IPR004155 PBS lyase HEAT-like repeat BF28_3509 IPR002938 FAD-binding domain BF28_3509 IPR036188 FAD/NAD(P)-binding domain superfamily BF28_351 IPR004373 Peptide chain release factor 1 BF28_351 IPR000352 Peptide chain release factor class I BF28_351 IPR005139 Peptide chain release factor BF28_3511 IPR011344 Single-stranded DNA-binding protein BF28_3511 IPR012340 Nucleic acid-binding, OB-fold BF28_3511 IPR000424 Primosome PriB/single-strand DNA-binding BF28_3514 IPR003593 AAA+ ATPase domain BF28_3514 IPR003439 ABC transporter-like BF28_3514 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily BF28_3514 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_3514 IPR017871 ABC transporter, conserved site BF28_3514 IPR032524 ABC transporter Uup, C-terminal BF28_3514 IPR032781 ABC-transporter extension domain BF28_3515 IPR003607 HD/PDEase domain BF28_3515 IPR006674 HD domain BF28_3517 IPR018958 Knr4/Smi1-like domain BF28_3517 IPR037883 Knr4/Smi1-like domain superfamily BF28_352 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BF28_352 IPR004556 Methyltransferase HemK-like BF28_352 IPR025714 Methyltransferase domain BF28_352 IPR040758 Release factor glutamine methyltransferase, N-terminal domain BF28_352 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific BF28_352 IPR002052 DNA methylase, N-6 adenine-specific, conserved site BF28_3522 IPR036882 Alba-like domain superfamily BF28_3522 IPR007347 Sporulation stage V, protein S BF28_3529 IPR012312 Haemerythrin-like BF28_3529 IPR023551 Iron-sulfur cluster repair protein ScdA BF28_3529 IPR038062 ScdA-like, N-terminal domain superfamily BF28_3529 IPR019903 Repair of iron centres family BF28_353 IPR014202 Sporulation stage II, protein R BF28_3530 IPR017121 Nitrite reductase [NAD(P)H], large subunit BF28_3530 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site BF28_3530 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain BF28_3530 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain BF28_3530 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB BF28_3530 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily BF28_3530 IPR041575 NADH-rubredoxin oxidoreductase, C-terminal BF28_3530 IPR023753 FAD/NAD(P)-binding domain BF28_3530 IPR036188 FAD/NAD(P)-binding domain superfamily BF28_3530 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily BF28_3530 IPR007419 BFD-like [2Fe-2S]-binding domain BF28_3530 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily BF28_3531 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily BF28_3531 IPR017941 Rieske [2Fe-2S] iron-sulphur domain BF28_3531 IPR012748 Rieske-like [2Fe-2S] domain, NirD-type BF28_3532 IPR006366 Uroporphyrin-III C-methyltransferase BF28_3532 IPR014777 Tetrapyrrole methylase, subdomain 1 BF28_3532 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily BF28_3532 IPR014776 Tetrapyrrole methylase, subdomain 2 BF28_3532 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site BF28_3532 IPR000878 Tetrapyrrole methylase BF28_3532 IPR035996 Tetrapyrrole methylase superfamily BF28_3533 IPR002762 Cobalamin (vitamin B12) biosynthesis CbiX BF28_3534 IPR028161 Siroheme biosynthesis protein Met8 BF28_3534 IPR006367 Sirohaem synthase, N-terminal BF28_3534 IPR036291 NAD(P)-binding domain superfamily BF28_3537 IPR036259 MFS transporter superfamily BF28_3537 IPR020846 Major facilitator superfamily domain BF28_3537 IPR011701 Major facilitator superfamily BF28_3539 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily BF28_3539 IPR003448 Molybdopterin biosynthesis MoaE BF28_3540 IPR001453 MoaB/Mog domain BF28_3540 IPR038987 Molybdopterin biosynthesis protein MoeA-like BF28_3540 IPR036425 MoaB/Mog-like domain superfamily BF28_3540 IPR005111 MoeA, C-terminal, domain IV BF28_3540 IPR036688 MoeA, C-terminal, domain IV superfamily BF28_3540 IPR005110 MoeA, N-terminal and linker domain BF28_3540 IPR036135 MoeA, N-terminal and linker domain superfamily BF28_3541 IPR035985 Ubiquitin-activating enzyme BF28_3541 IPR000594 THIF-type NAD/FAD binding fold BF28_3542 IPR013785 Aldolase-type TIM barrel BF28_3542 IPR013483 Molybdenum cofactor biosynthesis protein A BF28_3542 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site BF28_3542 IPR010505 Molybdenum cofactor synthesis C-terminal BF28_3542 IPR006638 Elp3/MiaB/NifB BF28_3542 IPR007197 Radical SAM BF28_3543 IPR014710 RmlC-like jelly roll fold BF28_3543 IPR018335 Transcription regulator HTH, Crp-type, conserved site BF28_3543 IPR036390 Winged helix DNA-binding domain superfamily BF28_3543 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_3543 IPR000595 Cyclic nucleotide-binding domain BF28_3543 IPR018490 Cyclic nucleotide-binding-like BF28_3543 IPR012318 Crp-type HTH domain BF28_3544 IPR023234 NarG-like domain BF28_3544 IPR036197 NarG-like superfamily BF28_3544 IPR003816 Nitrate reductase, gamma subunit BF28_3545 IPR036411 TorD-like superfamily BF28_3545 IPR003765 Nitrate reductase chaperone, NarJ BF28_3545 IPR042290 Nitrate reductase chaperone, NarJ, domain 1 BF28_3545 IPR042291 Nitrate reductase chaperone, NarJ, domain 2 BF28_3545 IPR020945 DMSO/Nitrate reductase chaperone BF28_3546 IPR029263 Respiratory nitrate reductase beta, C-terminal BF28_3546 IPR038262 Nitrate reductase beta, C-terminal domain superfamily BF28_3546 IPR006547 Nitrate reductase, beta subunit BF28_3546 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BF28_3547 IPR028189 Nitrate reductase, alpha subunit, N-terminal BF28_3547 IPR006468 Nitrate reductase, alpha subunit BF28_3547 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain BF28_3547 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site BF28_3547 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site BF28_3547 IPR006656 Molybdopterin oxidoreductase BF28_3547 IPR006657 Molybdopterin dinucleotide-binding domain BF28_3547 IPR037943 Nitrate reductase alpha subunit-like, MopB domain BF28_3547 IPR009010 Aspartate decarboxylase-like domain superfamily BF28_355 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily BF28_355 IPR005145 Putative GTP-binding controlling metal-binding domain BF28_355 IPR038385 Threonylcarbamoyl-AMP synthase, C-terminal domain superfamily BF28_355 IPR010923 tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 BF28_355 IPR006070 YrdC-like domain BF28_3550 IPR041628 ChlI/MoxR, AAA lid domain BF28_3550 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_3550 IPR011703 ATPase, AAA-3 BF28_3551 IPR002881 Domain of unknown function DUF58 BF28_3552 IPR025403 Domain of unknown function DUF4129 BF28_3552 IPR002931 Transglutaminase-like BF28_3552 IPR021878 Protein-glutamine gamma-glutamyltransferase TgpA, N-terminal BF28_3552 IPR038765 Papain-like cysteine peptidase superfamily BF28_3553 IPR029759 Glutathione peroxidase active site BF28_3553 IPR000889 Glutathione peroxidase BF28_3553 IPR036249 Thioredoxin-like superfamily BF28_3553 IPR029760 Glutathione peroxidase conserved site BF28_3555 IPR008254 Flavodoxin/nitric oxide synthase BF28_3555 IPR001279 Metallo-beta-lactamase BF28_3555 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BF28_3555 IPR012349 FMN-binding split barrel BF28_3555 IPR029039 Flavoprotein-like superfamily BF28_3555 IPR002563 Flavin reductase like domain BF28_3555 IPR001226 Flavodoxin, conserved site BF28_3558 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_3558 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 BF28_3558 IPR013325 RNA polymerase sigma factor, region 2 BF28_3558 IPR039425 RNA polymerase sigma-70 like BF28_3558 IPR007627 RNA polymerase sigma-70 region 2 BF28_3558 IPR013324 RNA polymerase sigma factor, region 3/4-like BF28_3558 IPR014294 RNA polymerase sigma-W, bacillaceae BF28_3558 IPR014284 RNA polymerase sigma-70 like domain BF28_3558 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site BF28_3559 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site BF28_3559 IPR036291 NAD(P)-binding domain superfamily BF28_3559 IPR020843 Polyketide synthase, enoylreductase domain BF28_3559 IPR011032 GroES-like superfamily BF28_3559 IPR013154 Alcohol dehydrogenase, N-terminal BF28_3559 IPR013149 Alcohol dehydrogenase, C-terminal BF28_356 IPR022929 Putative manganese efflux pump MntP BF28_356 IPR003810 Putative manganese efflux pump BF28_3561 IPR037523 Vicinal oxygen chelate (VOC) domain BF28_3561 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain BF28_3561 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BF28_3562 IPR030823 IolE/MocC family BF28_3562 IPR013022 Xylose isomerase-like, TIM barrel domain BF28_3562 IPR023952 Inosose dehydratase BF28_3562 IPR036237 Xylose isomerase-like superfamily BF28_3563 IPR014001 Helicase superfamily 1/2, ATP-binding domain BF28_3563 IPR001650 Helicase, C-terminal BF28_3563 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_3563 IPR011545 DEAD/DEAH box helicase domain BF28_3563 IPR014014 RNA helicase, DEAD-box type, Q motif BF28_3565 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_3565 IPR000559 Formate-tetrahydrofolate ligase, FTHFS BF28_3565 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site BF28_3566 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BF28_3566 IPR004033 UbiE/COQ5 methyltransferase BF28_3566 IPR023576 UbiE/COQ5 methyltransferase, conserved site BF28_3571 IPR014229 Sporulation protein YtfJ BF28_3584 IPR017813 Mycothiol acetyltransferase BF28_3584 IPR016181 Acyl-CoA N-acyltransferase BF28_3584 IPR000182 GNAT domain BF28_3590 IPR004839 Aminotransferase, class I/classII BF28_3590 IPR015424 Pyridoxal phosphate-dependent transferase BF28_3590 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BF28_3590 IPR036390 Winged helix DNA-binding domain superfamily BF28_3590 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_3590 IPR000524 Transcription regulator HTH, GntR BF28_3591 IPR003740 Uncharacterised membrane protein YitT BF28_3591 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal BF28_3591 IPR019264 Domain of unknown function DUF2179 BF28_3592 IPR002213 UDP-glucuronosyl/UDP-glucosyltransferase BF28_3592 IPR006326 UDP-glycosyltransferase, MGT BF28_3595 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BF28_3595 IPR004033 UbiE/COQ5 methyltransferase BF28_3595 IPR023576 UbiE/COQ5 methyltransferase, conserved site BF28_3596 IPR029066 PLP-binding barrel BF28_3596 IPR001608 Alanine racemase, N-terminal BF28_3596 IPR000821 Alanine racemase BF28_3596 IPR011079 Alanine racemase, C-terminal BF28_3596 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal BF28_3596 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site BF28_3598 IPR023214 HAD superfamily BF28_3598 IPR006379 HAD-superfamily hydrolase, subfamily IIB BF28_3598 IPR036412 HAD-like superfamily BF28_3598 IPR000150 Cof family BF28_3599 IPR029033 Histidine phosphatase superfamily BF28_3599 IPR013078 Histidine phosphatase superfamily, clade-1 BF28_3599 IPR005952 Phosphoglycerate mutase 1 BF28_3599 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site BF28_36 IPR001714 Peptidase M24, methionine aminopeptidase BF28_36 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 BF28_36 IPR000994 Peptidase M24 BF28_36 IPR036005 Creatinase/aminopeptidase-like BF28_360 IPR002563 Flavin reductase like domain BF28_360 IPR012349 FMN-binding split barrel BF28_3600 IPR001107 Band 7 domain BF28_3600 IPR036013 Band 7/SPFH domain superfamily BF28_3600 IPR018080 Band 7/stomatin-like, conserved site BF28_3600 IPR001972 Stomatin family BF28_3602 IPR011701 Major facilitator superfamily BF28_3602 IPR036259 MFS transporter superfamily BF28_3603 IPR036928 Amidase signature (AS) superfamily BF28_3603 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit BF28_3603 IPR000120 Amidase BF28_3603 IPR020556 Amidase, conserved site BF28_3603 IPR023631 Amidase signature domain BF28_3605 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily BF28_3605 IPR003709 Peptidase M15B BF28_3607 IPR010897 Sporulation stage II, protein P BF28_361 IPR032808 DoxX family BF28_3610 IPR012340 Nucleic acid-binding, OB-fold BF28_3610 IPR008231 Probable chaperone CsaA BF28_3610 IPR002547 tRNA-binding domain BF28_3611 IPR004685 Branched-chain amino acid transport system II carrier protein BF28_3614 IPR005170 Transporter-associated domain BF28_3614 IPR016169 FAD-binding, type PCMH, subdomain 2 BF28_3614 IPR036318 FAD-binding, type PCMH-like superfamily BF28_3614 IPR002550 CNNM, transmembrane domain BF28_3614 IPR000644 CBS domain BF28_3615 IPR007403 Protein of unknown function DUF456 BF28_3616 IPR016040 NAD(P)-binding domain BF28_3616 IPR036291 NAD(P)-binding domain superfamily BF28_3619 IPR030874 Cardiolipin synthase, Firmicutes-type BF28_3619 IPR022924 Cardiolipin synthase BF28_3619 IPR027379 Cardiolipin synthase N-terminal BF28_3619 IPR025202 Phospholipase D-like domain BF28_3619 IPR001736 Phospholipase D/Transphosphatidylase BF28_362 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 BF28_362 IPR011055 Duplicated hybrid motif BF28_3620 IPR040170 Cytosolic acyl coenzyme A thioester hydrolase BF28_3620 IPR033120 Hotdog acyl-CoA thioesterase (ACOT)-type domain BF28_3620 IPR029069 HotDog domain superfamily BF28_3620 IPR006683 Thioesterase domain BF28_3621 IPR015402 Protein of unknown function DUF1980 BF28_3622 IPR005524 Predicted permease DUF318 BF28_3624 IPR024923 Peptidoglycan biosynthesis protein, SpoVB-type BF28_3624 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain BF28_3624 IPR002797 Polysaccharide biosynthesis protein BF28_3625 IPR032816 SNARE associated Golgi protein BF28_3626 IPR000086 NUDIX hydrolase domain BF28_3626 IPR015797 NUDIX hydrolase-like domain superfamily BF28_3627 IPR014867 Spore coat protein CotH BF28_3629 IPR013078 Histidine phosphatase superfamily, clade-1 BF28_3629 IPR029033 Histidine phosphatase superfamily BF28_3629 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site BF28_3629 IPR023086 Phosphoglycerate mutase, GpmB, probable BF28_363 IPR023485 Phosphotyrosine protein phosphatase I BF28_363 IPR017867 Protein-tyrosine phosphatase, low molecular weight BF28_363 IPR036196 Phosphotyrosine protein phosphatase I superfamily BF28_3631 IPR037523 Vicinal oxygen chelate (VOC) domain BF28_3631 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BF28_3631 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain BF28_3631 IPR022858 Metallothiol transferase FosB BF28_3632 IPR039424 Solute-binding protein family 5 BF28_3632 IPR000914 Solute-binding protein family 5 domain BF28_3632 IPR030678 Peptide/nickel binding protein, MppA-type BF28_3632 IPR023765 Solute-binding protein family 5, conserved site BF28_3634 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_3634 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily BF28_3634 IPR023546 Methylated-DNA--protein-cysteine methyltransferase BF28_3634 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain BF28_3634 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain BF28_3634 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding BF28_3634 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site BF28_3635 IPR023663 NADPH dehydrogenase BF28_3635 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal BF28_3635 IPR013785 Aldolase-type TIM barrel BF28_3636 IPR016040 NAD(P)-binding domain BF28_3636 IPR036291 NAD(P)-binding domain superfamily BF28_3636 IPR000534 Semialdehyde dehydrogenase, NAD-binding BF28_3638 IPR006127 Periplasmic solute binding protein, ZnuA-like BF28_3638 IPR015304 ZinT domain BF28_3638 IPR006128 Adhesion lipoprotein BF28_3638 IPR012674 Calycin BF28_3638 IPR006129 Adhesin B BF28_364 IPR004785 Ribose 5-phosphate isomerase B BF28_364 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family BF28_364 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily BF28_3648 IPR027455 Spermine/spermidine acetyltransferase, N-terminal BF28_3648 IPR000182 GNAT domain BF28_3648 IPR016181 Acyl-CoA N-acyltransferase BF28_3649 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_3649 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal BF28_3649 IPR003495 CobW/HypB/UreG, nucleotide-binding domain BF28_3649 IPR036627 CobW-like, C-terminal domain superfamily BF28_365 IPR028345 Aminoglycoside 3-N-acetyltransferase-like BF28_365 IPR006340 Protein of unknown function DUF436 BF28_3650 IPR020471 Aldo/keto reductase BF28_3650 IPR023210 NADP-dependent oxidoreductase domain BF28_3650 IPR036812 NADP-dependent oxidoreductase domain superfamily BF28_3652 IPR001613 Flavin amine oxidase BF28_3652 IPR036188 FAD/NAD(P)-binding domain superfamily BF28_3652 IPR002937 Amine oxidase BF28_3654 IPR019949 Luciferase family oxidoreductase, group 1 BF28_3654 IPR036661 Luciferase-like domain superfamily BF28_3654 IPR011251 Luciferase-like domain BF28_3657 IPR002177 DNA-binding protein Dps BF28_3657 IPR008331 Ferritin/DPS protein domain BF28_3657 IPR023188 DNA-binding protein Dps, conserved site BF28_3657 IPR009078 Ferritin-like superfamily BF28_3657 IPR012347 Ferritin-like BF28_3658 IPR038728 Uncharacterized membrane protein YkvI BF28_366 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BF28_366 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BF28_366 IPR001085 Serine hydroxymethyltransferase BF28_366 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site BF28_366 IPR015424 Pyridoxal phosphate-dependent transferase BF28_366 IPR039429 Serine hydroxymethyltransferase-like domain BF28_3661 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding BF28_3661 IPR029151 Periplasmic sensor-like domain superfamily BF28_3661 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain BF28_3661 IPR003660 HAMP domain BF28_3661 IPR033479 Double Cache domain 1 BF28_3662 IPR004881 Ribosome biogenesis GTPase RsgA BF28_3662 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_3662 IPR012340 Nucleic acid-binding, OB-fold BF28_3662 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain BF28_3662 IPR010914 RsgA GTPase domain BF28_3666 IPR011701 Major facilitator superfamily BF28_3666 IPR020846 Major facilitator superfamily domain BF28_3666 IPR036259 MFS transporter superfamily BF28_3666 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG BF28_3667 IPR023210 NADP-dependent oxidoreductase domain BF28_3667 IPR036812 NADP-dependent oxidoreductase domain superfamily BF28_3667 IPR020471 Aldo/keto reductase BF28_3668 IPR036390 Winged helix DNA-binding domain superfamily BF28_3668 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_3668 IPR001845 HTH ArsR-type DNA-binding domain BF28_3668 IPR011991 ArsR-like helix-turn-helix domain BF28_3669 IPR015500 Peptidase S8, subtilisin-related BF28_3669 IPR023828 Peptidase S8, subtilisin, Ser-active site BF28_3669 IPR022398 Peptidase S8, subtilisin, His-active site BF28_3669 IPR034202 Subtilisin Carlsberg-like catalytic domain BF28_3669 IPR023827 Peptidase S8, subtilisin, Asp-active site BF28_3669 IPR000209 Peptidase S8/S53 domain BF28_3669 IPR036852 Peptidase S8/S53 domain superfamily BF28_367 IPR029057 Phosphoribosyltransferase-like BF28_367 IPR000836 Phosphoribosyltransferase domain BF28_367 IPR034332 Uracil phosphoribosyltransferase, bacterial-type BF28_367 IPR005765 Uracil phosphoribosyl transferase BF28_3670 IPR037914 SpoVT-AbrB domain superfamily BF28_3670 IPR007159 SpoVT-AbrB domain BF28_3670 IPR040678 AbrB, C-terminal BF28_3671 IPR027022 ABC transporter permease protein, BceB-type BF28_3671 IPR003838 ABC transporter permease protein domain BF28_3672 IPR003694 NAD(+) synthetase BF28_3672 IPR022926 NH(3)-dependent NAD(+) synthetase BF28_3672 IPR022310 NAD/GMP synthase BF28_3672 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BF28_3673 IPR020476 NUDIX hydrolase BF28_3673 IPR015797 NUDIX hydrolase-like domain superfamily BF28_3673 IPR020084 NUDIX hydrolase, conserved site BF28_3673 IPR000086 NUDIX hydrolase domain BF28_3673 IPR023214 HAD superfamily BF28_3673 IPR036412 HAD-like superfamily BF28_3673 IPR006357 HAD-superfamily hydrolase, subfamily IIA BF28_3678 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase BF28_3678 IPR002641 Patatin-like phospholipase domain BF28_3680 IPR000524 Transcription regulator HTH, GntR BF28_3680 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BF28_3680 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BF28_3680 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_3680 IPR015424 Pyridoxal phosphate-dependent transferase BF28_3680 IPR036390 Winged helix DNA-binding domain superfamily BF28_3680 IPR004839 Aminotransferase, class I/classII BF28_3681 IPR001123 Amino acid exporter protein, LeuE-type BF28_3682 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG BF28_3682 IPR036259 MFS transporter superfamily BF28_3682 IPR011701 Major facilitator superfamily BF28_3682 IPR020846 Major facilitator superfamily domain BF28_3683 IPR038300 SASP, alpha/beta-type superfamily BF28_3683 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site BF28_3683 IPR001448 Small acid-soluble spore protein, alpha/beta-type BF28_3684 IPR013022 Xylose isomerase-like, TIM barrel domain BF28_3684 IPR036237 Xylose isomerase-like superfamily BF28_3687 IPR042099 AMP-dependent synthetase-like superfamily BF28_3687 IPR020845 AMP-binding, conserved site BF28_3687 IPR010192 2-succinylbenzoate--CoA ligase BF28_3687 IPR000873 AMP-dependent synthetase/ligase BF28_3687 IPR025110 AMP-binding enzyme, C-terminal domain BF28_3688 IPR037455 Aerobactin siderophore biosynthesis, IucA/IucC-like BF28_3688 IPR022770 Ferric iron reductase FhuF domain BF28_3688 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal BF28_3689 IPR037455 Aerobactin siderophore biosynthesis, IucA/IucC-like BF28_3689 IPR022770 Ferric iron reductase FhuF domain BF28_3689 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal BF28_369 IPR039072 ATP synthase protein I, Bacilli-type BF28_369 IPR005598 ATP synthase protein I BF28_3690 IPR016181 Acyl-CoA N-acyltransferase BF28_3690 IPR000182 GNAT domain BF28_3691 IPR003416 MgtC/SapB/SrpB/YhiD family BF28_3693 IPR002509 NodB homology domain BF28_3693 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel BF28_3694 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BF28_3694 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BF28_3694 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BF28_3694 IPR000014 PAS domain BF28_3694 IPR005467 Histidine kinase domain BF28_3694 IPR035965 PAS domain superfamily BF28_3694 IPR013767 PAS fold BF28_3694 IPR031967 PhoR, single Cache-like domain BF28_3694 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BF28_3694 IPR003594 Histidine kinase/HSP90-like ATPase BF28_3695 IPR011006 CheY-like superfamily BF28_3695 IPR001867 OmpR/PhoB-type DNA-binding domain BF28_3695 IPR039420 Transcriptional regulatory protein WalR-like BF28_3695 IPR016032 Signal transduction response regulator, C-terminal effector BF28_3695 IPR001789 Signal transduction response regulator, receiver domain BF28_3695 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_3697 IPR004474 Cell envelope-related transcriptional attenuator domain BF28_37 IPR033690 Adenylate kinase, conserved site BF28_37 IPR000850 Adenylate kinase/UMP-CMP kinase BF28_37 IPR006259 Adenylate kinase subfamily BF28_37 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_37 IPR007862 Adenylate kinase, active site lid domain BF28_370 IPR035908 ATP synthase, F0 complex, subunit A superfamily BF28_370 IPR023011 ATP synthase, F0 complex, subunit A, active site BF28_370 IPR000568 ATP synthase, F0 complex, subunit A BF28_3700 IPR000870 Homoserine kinase BF28_3700 IPR006203 GHMP kinase, ATP-binding, conserved site BF28_3700 IPR020568 Ribosomal protein S5 domain 2-type fold BF28_3700 IPR013750 GHMP kinase, C-terminal domain BF28_3700 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BF28_3700 IPR036554 GHMP kinase, C-terminal domain superfamily BF28_3700 IPR006204 GHMP kinase N-terminal domain BF28_3701 IPR001926 Pyridoxal-phosphate dependent enzyme BF28_3701 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site BF28_3701 IPR004450 Threonine synthase-like BF28_3701 IPR026260 Threonine synthase, bacterial/archaeal BF28_3701 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme BF28_3702 IPR019811 Homoserine dehydrogenase, conserved site BF28_3702 IPR002912 ACT domain BF28_3702 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding BF28_3702 IPR036291 NAD(P)-binding domain superfamily BF28_3702 IPR016204 Homoserine dehydrogenase BF28_3702 IPR001342 Homoserine dehydrogenase, catalytic BF28_3706 IPR040802 Peptidoglycan GlcNAc deacetylase, N-terminal BF28_3706 IPR002509 NodB homology domain BF28_3706 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel BF28_3706 IPR017219 Peptidoglycan GlcNAc deacetylase BF28_3707 IPR007530 Aminoglycoside 6-adenylyltransferase BF28_3709 IPR020904 Short-chain dehydrogenase/reductase, conserved site BF28_3709 IPR002347 Short-chain dehydrogenase/reductase SDR BF28_3709 IPR036291 NAD(P)-binding domain superfamily BF28_371 IPR035921 F/V-ATP synthase subunit C superfamily BF28_371 IPR002379 V-ATPase proteolipid subunit C-like domain BF28_371 IPR038662 F1F0 ATP synthase subunit C superfamily BF28_371 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site BF28_371 IPR000454 ATP synthase, F0 complex, subunit C BF28_371 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast BF28_3710 IPR003594 Histidine kinase/HSP90-like ATPase BF28_3710 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BF28_3710 IPR005467 Histidine kinase domain BF28_3710 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BF28_3710 IPR000014 PAS domain BF28_3710 IPR035965 PAS domain superfamily BF28_3710 IPR013767 PAS fold BF28_3710 IPR031967 PhoR, single Cache-like domain BF28_3710 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BF28_3710 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BF28_3712 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_3712 IPR011006 CheY-like superfamily BF28_3712 IPR001867 OmpR/PhoB-type DNA-binding domain BF28_3712 IPR001789 Signal transduction response regulator, receiver domain BF28_3712 IPR039420 Transcriptional regulatory protein WalR-like BF28_3713 IPR003439 ABC transporter-like BF28_3713 IPR003593 AAA+ ATPase domain BF28_3713 IPR011527 ABC transporter type 1, transmembrane domain BF28_3713 IPR017871 ABC transporter, conserved site BF28_3713 IPR036640 ABC transporter type 1, transmembrane domain superfamily BF28_3713 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_3713 IPR039421 Type I protein exporter BF28_3715 IPR018392 LysM domain BF28_3715 IPR036779 LysM domain superfamily BF28_3715 IPR038765 Papain-like cysteine peptidase superfamily BF28_3715 IPR000064 Endopeptidase, NLPC/P60 domain BF28_3717 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily BF28_3717 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal BF28_3717 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal BF28_3717 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A BF28_3717 IPR015956 Penicillin-binding protein, C-terminal domain superfamily BF28_3717 IPR012338 Beta-lactamase/transpeptidase-like BF28_3718 IPR040921 LD-carboxypeptidase, C-terminal BF28_3718 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily BF28_3718 IPR003507 Peptidase family S66 BF28_3718 IPR040449 LD-carboxypeptidase, N-terminal BF28_3718 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal BF28_3718 IPR029062 Class I glutamine amidotransferase-like BF28_372 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily BF28_372 IPR005864 ATP synthase, F0 complex, subunit b, bacterial BF28_372 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast BF28_3721 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC BF28_3721 IPR036640 ABC transporter type 1, transmembrane domain superfamily BF28_3721 IPR003439 ABC transporter-like BF28_3721 IPR017871 ABC transporter, conserved site BF28_3721 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_3721 IPR011527 ABC transporter type 1, transmembrane domain BF28_3721 IPR003593 AAA+ ATPase domain BF28_3722 IPR011527 ABC transporter type 1, transmembrane domain BF28_3722 IPR003439 ABC transporter-like BF28_3722 IPR017871 ABC transporter, conserved site BF28_3722 IPR036640 ABC transporter type 1, transmembrane domain superfamily BF28_3722 IPR039421 Type I protein exporter BF28_3722 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_3722 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD BF28_3722 IPR003593 AAA+ ATPase domain BF28_3723 IPR003317 Cytochrome ubiquinol oxidase subunit 2 BF28_3724 IPR002585 Cytochrome ubiquinol oxidase subunit 1 BF28_3726 IPR036390 Winged helix DNA-binding domain superfamily BF28_3726 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_3726 IPR011991 ArsR-like helix-turn-helix domain BF28_3726 IPR000835 MarR-type HTH domain BF28_373 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily BF28_373 IPR000711 ATPase, OSCP/delta subunit BF28_373 IPR020781 ATPase, OSCP/delta subunit, conserved site BF28_3730 IPR036390 Winged helix DNA-binding domain superfamily BF28_3730 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_3730 IPR000847 Transcription regulator HTH, LysR BF28_3730 IPR005119 LysR, substrate-binding BF28_3732 IPR001851 ABC transporter, permease BF28_3733 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_3733 IPR003439 ABC transporter-like BF28_3733 IPR017871 ABC transporter, conserved site BF28_3733 IPR003593 AAA+ ATPase domain BF28_3733 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein BF28_3734 IPR003593 AAA+ ATPase domain BF28_3734 IPR017871 ABC transporter, conserved site BF28_3734 IPR003439 ABC transporter-like BF28_3734 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal BF28_3734 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_3736 IPR016039 Thiolase-like BF28_3736 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 BF28_3736 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal BF28_3736 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BF28_3737 IPR029069 HotDog domain superfamily BF28_3737 IPR002539 MaoC-like dehydratase domain BF28_3738 IPR020845 AMP-binding, conserved site BF28_3738 IPR000873 AMP-dependent synthetase/ligase BF28_3738 IPR042099 AMP-dependent synthetase-like superfamily BF28_3738 IPR010192 2-succinylbenzoate--CoA ligase BF28_3738 IPR025110 AMP-binding enzyme, C-terminal domain BF28_374 IPR033732 ATP synthase, F1 complex, alpha subunit nucleotide-binding domain BF28_374 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily BF28_374 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain BF28_374 IPR000793 ATP synthase, alpha subunit, C-terminal BF28_374 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily BF28_374 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_374 IPR005294 ATP synthase, F1 complex, alpha subunit BF28_374 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site BF28_374 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain BF28_374 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily BF28_3741 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal BF28_3741 IPR003495 CobW/HypB/UreG, nucleotide-binding domain BF28_3741 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_3742 IPR001613 Flavin amine oxidase BF28_3742 IPR036188 FAD/NAD(P)-binding domain superfamily BF28_3742 IPR002937 Amine oxidase BF28_3743 IPR001236 Lactate/malate dehydrogenase, N-terminal BF28_3743 IPR022383 Lactate/malate dehydrogenase, C-terminal BF28_3743 IPR018177 L-lactate dehydrogenase, active site BF28_3743 IPR011304 L-lactate dehydrogenase BF28_3743 IPR001557 L-lactate/malate dehydrogenase BF28_3743 IPR036291 NAD(P)-binding domain superfamily BF28_3743 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal BF28_3744 IPR002549 Transmembrane protein TqsA-like BF28_3745 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit BF28_3745 IPR000120 Amidase BF28_3745 IPR023631 Amidase signature domain BF28_3745 IPR036928 Amidase signature (AS) superfamily BF28_3745 IPR020556 Amidase, conserved site BF28_3747 IPR029479 Nitroreductase BF28_3747 IPR000415 Nitroreductase-like BF28_3748 IPR036249 Thioredoxin-like superfamily BF28_3748 IPR001853 DSBA-like thioredoxin domain BF28_3749 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_3749 IPR000944 Transcription regulator Rrf2-type BF28_3749 IPR036390 Winged helix DNA-binding domain superfamily BF28_375 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site BF28_375 IPR000131 ATP synthase, F1 complex, gamma subunit BF28_375 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily BF28_3750 IPR000847 Transcription regulator HTH, LysR BF28_3750 IPR005119 LysR, substrate-binding BF28_3750 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_3750 IPR036390 Winged helix DNA-binding domain superfamily BF28_3751 IPR000620 EamA domain BF28_3753 IPR012533 YcnI-like BF28_3753 IPR038507 YcnI-like superfamily BF28_3754 IPR008457 Copper resistance protein D BF28_3754 IPR007348 CopC domain BF28_3754 IPR014756 Immunoglobulin E-set BF28_3754 IPR032694 Copper transport protein C/D BF28_3754 IPR032693 YtkA-like domain BF28_3756 IPR004685 Branched-chain amino acid transport system II carrier protein BF28_3757 IPR023048 NADH-azoreductase, FMN-dependent BF28_3757 IPR003680 Flavodoxin-like fold BF28_3757 IPR029039 Flavoprotein-like superfamily BF28_376 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal BF28_376 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily BF28_376 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site BF28_376 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain BF28_376 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain BF28_376 IPR005722 ATP synthase, F1 complex, beta subunit BF28_376 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_376 IPR003593 AAA+ ATPase domain BF28_3761 IPR037914 SpoVT-AbrB domain superfamily BF28_3761 IPR007159 SpoVT-AbrB domain BF28_3761 IPR040678 AbrB, C-terminal BF28_3764 IPR003439 ABC transporter-like BF28_3764 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_3764 IPR003593 AAA+ ATPase domain BF28_3764 IPR017871 ABC transporter, conserved site BF28_3766 IPR037143 4'-phosphopantetheinyl transferase domain superfamily BF28_3766 IPR004568 Phosphopantetheine-protein transferase domain BF28_3766 IPR008278 4'-phosphopantetheinyl transferase domain BF28_3767 IPR039421 Type I protein exporter BF28_3767 IPR011527 ABC transporter type 1, transmembrane domain BF28_3767 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_3767 IPR003593 AAA+ ATPase domain BF28_3767 IPR036640 ABC transporter type 1, transmembrane domain superfamily BF28_3767 IPR017871 ABC transporter, conserved site BF28_3767 IPR003439 ABC transporter-like BF28_3768 IPR020845 AMP-binding, conserved site BF28_3768 IPR029058 Alpha/Beta hydrolase fold BF28_3768 IPR010060 Non-ribosomal peptide synthase BF28_3768 IPR020806 Polyketide synthase, phosphopantetheine-binding domain BF28_3768 IPR010071 Amino acid adenylation domain BF28_3768 IPR009081 Phosphopantetheine binding ACP domain BF28_3768 IPR025110 AMP-binding enzyme, C-terminal domain BF28_3768 IPR006162 Phosphopantetheine attachment site BF28_3768 IPR001242 Condensation domain BF28_3768 IPR000873 AMP-dependent synthetase/ligase BF28_3768 IPR001031 Thioesterase BF28_3768 IPR042099 AMP-dependent synthetase-like superfamily BF28_3768 IPR036736 ACP-like superfamily BF28_3768 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily BF28_3769 IPR025110 AMP-binding enzyme, C-terminal domain BF28_3769 IPR029058 Alpha/Beta hydrolase fold BF28_3769 IPR001242 Condensation domain BF28_3769 IPR001031 Thioesterase BF28_3769 IPR036736 ACP-like superfamily BF28_3769 IPR006162 Phosphopantetheine attachment site BF28_3769 IPR010071 Amino acid adenylation domain BF28_3769 IPR009081 Phosphopantetheine binding ACP domain BF28_3769 IPR020806 Polyketide synthase, phosphopantetheine-binding domain BF28_3769 IPR010060 Non-ribosomal peptide synthase BF28_3769 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily BF28_3769 IPR042099 AMP-dependent synthetase-like superfamily BF28_3769 IPR000873 AMP-dependent synthetase/ligase BF28_3769 IPR020845 AMP-binding, conserved site BF28_377 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal BF28_377 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain BF28_377 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal BF28_377 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit BF28_377 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily BF28_3770 IPR010060 Non-ribosomal peptide synthase BF28_3770 IPR025110 AMP-binding enzyme, C-terminal domain BF28_3770 IPR020845 AMP-binding, conserved site BF28_3770 IPR001031 Thioesterase BF28_3770 IPR001242 Condensation domain BF28_3770 IPR029058 Alpha/Beta hydrolase fold BF28_3770 IPR006162 Phosphopantetheine attachment site BF28_3770 IPR009081 Phosphopantetheine binding ACP domain BF28_3770 IPR036736 ACP-like superfamily BF28_3770 IPR010071 Amino acid adenylation domain BF28_3770 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily BF28_3770 IPR020806 Polyketide synthase, phosphopantetheine-binding domain BF28_3770 IPR000873 AMP-dependent synthetase/ligase BF28_3770 IPR042099 AMP-dependent synthetase-like superfamily BF28_3772 IPR001031 Thioesterase BF28_3772 IPR029058 Alpha/Beta hydrolase fold BF28_3772 IPR012223 Thioesterase type II, NRPS/PKS/S-FAS BF28_3773 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal BF28_3773 IPR000994 Peptidase M24 BF28_3773 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site BF28_3773 IPR007865 Aminopeptidase P, N-terminal BF28_3773 IPR036005 Creatinase/aminopeptidase-like BF28_3777 IPR009242 Protein of unknown function DUF896 BF28_3778 IPR016193 Cytidine deaminase-like BF28_3778 IPR006262 Cytidine deaminase, homotetrameric BF28_3778 IPR002125 Cytidine and deoxycytidylate deaminase domain BF28_3779 IPR000312 Glycosyl transferase, family 3 BF28_3779 IPR017459 Glycosyl transferase family 3, N-terminal domain BF28_3779 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily BF28_3779 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily BF28_3779 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase BF28_3779 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site BF28_3779 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic BF28_3779 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily BF28_3779 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal BF28_3780 IPR002668 Concentrative nucleoside transporter N-terminal domain BF28_3780 IPR011657 Concentrative nucleoside transporter C-terminal domain BF28_3780 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial BF28_3780 IPR008276 Concentrative nucleoside transporter BF28_3781 IPR011343 Deoxyribose-phosphate aldolase BF28_3781 IPR002915 DeoC/FbaB/ lacD aldolase BF28_3781 IPR028581 Deoxyribose-phosphate aldolase type I BF28_3781 IPR013785 Aldolase-type TIM barrel BF28_3782 IPR037171 NagB/RpiA transferase-like BF28_3782 IPR007324 Sugar-binding domain, putative BF28_3782 IPR013324 RNA polymerase sigma factor, region 3/4-like BF28_3784 IPR008414 Hemolysin BL-binding component BF28_3785 IPR008414 Hemolysin BL-binding component BF28_3787 IPR002293 Amino acid/polyamine transporter I BF28_3789 IPR013332 Ketopantoate reductase, N-terminal domain BF28_3789 IPR036291 NAD(P)-binding domain superfamily BF28_3789 IPR003710 Ketopantoate reductase ApbA/PanE BF28_3789 IPR013328 6-phosphogluconate dehydrogenase, domain 2 BF28_3789 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily BF28_3789 IPR013752 Ketopantoate reductase, C-terminal domain BF28_3792 IPR001046 NRAMP family BF28_3795 IPR003594 Histidine kinase/HSP90-like ATPase BF28_3795 IPR005467 Histidine kinase domain BF28_3795 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BF28_3795 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BF28_3795 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BF28_3795 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BF28_3796 IPR011006 CheY-like superfamily BF28_3796 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_3796 IPR039420 Transcriptional regulatory protein WalR-like BF28_3796 IPR001789 Signal transduction response regulator, receiver domain BF28_3796 IPR016032 Signal transduction response regulator, C-terminal effector BF28_3796 IPR001867 OmpR/PhoB-type DNA-binding domain BF28_3797 IPR000182 GNAT domain BF28_3797 IPR016181 Acyl-CoA N-acyltransferase BF28_3798 IPR006638 Elp3/MiaB/NifB BF28_3798 IPR023885 4Fe4S-binding SPASM domain BF28_3798 IPR013785 Aldolase-type TIM barrel BF28_3798 IPR017200 Coenzyme PQQ synthesis protein E BF28_3798 IPR023913 Mycofactocin, radical SAM peptide maturase BF28_3798 IPR007197 Radical SAM BF28_3798 IPR034391 Cmo-like SPASM domain containing BF28_38 IPR023201 SecY domain superfamily BF28_38 IPR030659 SecY conserved site BF28_38 IPR002208 SecY/SEC61-alpha family BF28_38 IPR026593 Protein translocase subunit SecY BF28_380 IPR005330 MHYT domain BF28_380 IPR029787 Nucleotide cyclase BF28_380 IPR035965 PAS domain superfamily BF28_380 IPR001633 EAL domain BF28_380 IPR035919 EAL domain superfamily BF28_380 IPR000160 GGDEF domain BF28_3802 IPR030678 Peptide/nickel binding protein, MppA-type BF28_3802 IPR039424 Solute-binding protein family 5 BF28_3802 IPR023765 Solute-binding protein family 5, conserved site BF28_3802 IPR000914 Solute-binding protein family 5 domain BF28_3803 IPR024981 Domain of unknown function DUF3887 BF28_3803 IPR022742 Serine aminopeptidase, S33 BF28_3803 IPR029058 Alpha/Beta hydrolase fold BF28_3804 IPR032466 Metal-dependent hydrolase BF28_3804 IPR011059 Metal-dependent hydrolase, composite domain superfamily BF28_3804 IPR006680 Amidohydrolase-related BF28_3804 IPR023512 Deaminase MtaD/DadD BF28_3807 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain BF28_3807 IPR017821 Succinate CoA transferase BF28_3807 IPR037171 NagB/RpiA transferase-like BF28_3807 IPR003702 Acetyl-CoA hydrolase/transferase BF28_3807 IPR038460 Acetyl-CoA hydrolase/transferase, C-terminal domain superfamily BF28_3808 IPR001789 Signal transduction response regulator, receiver domain BF28_3808 IPR007492 LytTR DNA-binding domain BF28_3808 IPR011006 CheY-like superfamily BF28_381 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid BF28_381 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 BF28_381 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily BF28_3810 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B BF28_3810 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA-type BF28_3811 IPR023692 Multidrug resistance protein MdtG BF28_3811 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG BF28_3811 IPR036259 MFS transporter superfamily BF28_3811 IPR020846 Major facilitator superfamily domain BF28_3811 IPR011701 Major facilitator superfamily BF28_3814 IPR029052 Metallo-dependent phosphatase-like BF28_3814 IPR019079 Capsule synthesis protein, CapA BF28_3816 IPR001926 Pyridoxal-phosphate dependent enzyme BF28_3816 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site BF28_3816 IPR001721 Threonine dehydratase, ACT-like domain BF28_3816 IPR038110 Threonine dehydratase, ACT-like domain superfamily BF28_3816 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme BF28_3816 IPR011820 L-threonine dehydratase biosynthetic IlvA BF28_3817 IPR037237 IlvD/EDD, N-terminal domain BF28_3817 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site BF28_3817 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase BF28_3817 IPR004404 Dihydroxy-acid dehydratase BF28_3817 IPR042096 Dihydroxy-acid dehydratase, C-terminal BF28_3818 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily BF28_3818 IPR014359 Ketol-acid reductoisomerase, prokaryotic BF28_3818 IPR013116 Ketol-acid reductoisomerase, N-terminal BF28_3818 IPR013023 Ketol-acid reductoisomerase BF28_3818 IPR000506 Ketol-acid reductoisomerase, C-terminal BF28_3818 IPR036291 NAD(P)-binding domain superfamily BF28_382 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit BF28_382 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit BF28_3820 IPR029035 DHS-like NAD/FAD-binding domain superfamily BF28_3820 IPR039368 Acetolactate synthase large subunit, TPP binding domain BF28_3820 IPR012846 Acetolactate synthase, large subunit, biosynthetic BF28_3820 IPR029061 Thiamin diphosphate-binding fold BF28_3820 IPR012000 Thiamine pyrophosphate enzyme, central domain BF28_3820 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain BF28_3820 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding BF28_3821 IPR018300 Aminotransferase, class IV, conserved site BF28_3821 IPR036038 Aminotransferase-like, PLP-dependent enzymes BF28_3821 IPR005785 Branched-chain amino acid aminotransferase I BF28_3821 IPR033939 Branched-chain aminotransferase BF28_3821 IPR001544 Aminotransferase class IV BF28_3822 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase BF28_3822 IPR036291 NAD(P)-binding domain superfamily BF28_3822 IPR020904 Short-chain dehydrogenase/reductase, conserved site BF28_3822 IPR002347 Short-chain dehydrogenase/reductase SDR BF28_3823 IPR002569 Peptide methionine sulphoxide reductase MsrA BF28_3823 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily BF28_3826 IPR007353 Protein of unknown function DUF421 BF28_3826 IPR023090 UPF0702, alpha/beta domain superfamily BF28_3827 IPR009057 Homeobox-like domain superfamily BF28_3828 IPR001137 Glycoside hydrolase family 11 BF28_3828 IPR008979 Galactose-binding-like domain superfamily BF28_3828 IPR013319 Glycoside hydrolase family 11/12 BF28_3828 IPR018208 Glycoside hydrolase family 11, active site 1 BF28_3828 IPR002509 NodB homology domain BF28_3828 IPR033123 Glycosyl hydrolases family 11 (GH11) domain BF28_3828 IPR033119 Glycoside hydrolase family 11, active site 2 BF28_3828 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel BF28_3828 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily BF28_3828 IPR005084 Carbohydrate binding module family 6 BF28_3829 IPR037272 Sodium:neurotransmitter symporter superfamily BF28_3829 IPR000175 Sodium:neurotransmitter symporter BF28_383 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit BF28_383 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily BF28_383 IPR010218 NADH dehydrogenase, subunit C BF28_3830 IPR024923 Peptidoglycan biosynthesis protein, SpoVB-type BF28_3830 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain BF28_3830 IPR002797 Polysaccharide biosynthesis protein BF28_3833 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site BF28_3833 IPR005859 Cysteine synthase CysK BF28_3833 IPR005856 Cysteine synthase BF28_3833 IPR001926 Pyridoxal-phosphate dependent enzyme BF28_3833 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme BF28_3834 IPR036259 MFS transporter superfamily BF28_3834 IPR011701 Major facilitator superfamily BF28_3834 IPR020846 Major facilitator superfamily domain BF28_3835 IPR030678 Peptide/nickel binding protein, MppA-type BF28_3835 IPR039424 Solute-binding protein family 5 BF28_3835 IPR023765 Solute-binding protein family 5, conserved site BF28_3835 IPR000914 Solute-binding protein family 5 domain BF28_3836 IPR030394 HflX-type guanine nucleotide-binding (G) domain BF28_3836 IPR042108 GTPase HflX, N-terminal domain superfamily BF28_3836 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_3836 IPR032305 GTP-binding protein, middle domain BF28_3836 IPR025121 GTPase HflX, N-terminal BF28_3836 IPR016496 GTPase HflX BF28_3836 IPR006073 GTP binding domain BF28_3838 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal BF28_3838 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 BF28_3838 IPR016039 Thiolase-like BF28_3838 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BF28_3839 IPR020846 Major facilitator superfamily domain BF28_3839 IPR011701 Major facilitator superfamily BF28_3839 IPR036259 MFS transporter superfamily BF28_384 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily BF28_384 IPR001135 NADH-quinone oxidoreductase, subunit D BF28_384 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H BF28_384 IPR029014 [NiFe]-hydrogenase, large subunit BF28_3840 IPR004638 Drug resistance transporter EmrB-like BF28_3840 IPR011701 Major facilitator superfamily BF28_3840 IPR020846 Major facilitator superfamily domain BF28_3840 IPR005829 Sugar transporter, conserved site BF28_3840 IPR036259 MFS transporter superfamily BF28_3841 IPR005149 Transcription regulator PadR, N-terminal BF28_3841 IPR018309 Transcription regulator PadR, C-terminal BF28_3841 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_3841 IPR036390 Winged helix DNA-binding domain superfamily BF28_3842 IPR022488 Polyphosphate kinase-2-related BF28_3842 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_3842 IPR022489 Polyphosphate:AMP phosphotransferase BF28_3843 IPR000600 ROK family BF28_3843 IPR004654 Glucokinase ROK BF28_3844 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site BF28_3844 IPR029056 Ribokinase-like BF28_3844 IPR017583 Tagatose/fructose phosphokinase BF28_3844 IPR011611 Carbohydrate kinase PfkB BF28_3844 IPR005926 Tagatose-6-phosphate kinase BF28_3845 IPR023955 D-tagatose-bisphosphate aldolase, class II, subunit GatY BF28_3845 IPR011288 D-tagatose-bisphosphate aldolase, class II, subunit KbaY/GatY BF28_3845 IPR000771 Fructose-bisphosphate aldolase, class-II BF28_3845 IPR013785 Aldolase-type TIM barrel BF28_3846 IPR003764 N-acetylglucosamine-6-phosphate deacetylase BF28_3846 IPR011059 Metal-dependent hydrolase, composite domain superfamily BF28_3846 IPR006680 Amidohydrolase-related BF28_3846 IPR032466 Metal-dependent hydrolase BF28_3847 IPR035464 AgaS, SIS domain BF28_3847 IPR035466 GlmS/AgaS, SIS domain 1 BF28_3847 IPR001347 Sugar isomerase (SIS) BF28_385 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H BF28_385 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site BF28_3850 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BF28_3850 IPR035906 MetI-like superfamily BF28_3851 IPR035906 MetI-like superfamily BF28_3851 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BF28_3852 IPR006059 Bacterial extracellular solute-binding protein BF28_3852 IPR006061 Solute-binding family 1, conserved site BF28_3853 IPR025736 PucR C-terminal helix-turn-helix domain BF28_3853 IPR042070 PucR C-terminal helix-turn-helix domain superfamily BF28_3854 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_3854 IPR040582 MalK, OB fold domain BF28_3854 IPR017871 ABC transporter, conserved site BF28_3854 IPR005116 Transport-associated OB, type 1 BF28_3854 IPR003593 AAA+ ATPase domain BF28_3854 IPR003439 ABC transporter-like BF28_3854 IPR008995 Molybdate/tungstate binding, C-terminal BF28_3857 IPR022324 Bacilysin exporter BacE, putative BF28_3857 IPR011701 Major facilitator superfamily BF28_3857 IPR036259 MFS transporter superfamily BF28_3859 IPR003343 Bacterial Ig-like, group 2 BF28_3859 IPR008964 Invasin/intimin cell-adhesion fragments BF28_3859 IPR032812 SbsA, Ig-like domain BF28_3859 IPR001119 S-layer homology domain BF28_3860 IPR000086 NUDIX hydrolase domain BF28_3860 IPR003562 Mutator MutX protein BF28_3860 IPR015797 NUDIX hydrolase-like domain superfamily BF28_3860 IPR020084 NUDIX hydrolase, conserved site BF28_3861 IPR025450 YndJ-like protein BF28_3862 IPR025311 Domain of unknown function DUF4166 BF28_3864 IPR018042 Aspartate kinase, conserved site BF28_3864 IPR002912 ACT domain BF28_3864 IPR041740 Aspartokinase catalytic domain BF28_3864 IPR036393 Acetylglutamate kinase-like superfamily BF28_3864 IPR027795 CASTOR, ACT domain BF28_3864 IPR001048 Aspartate/glutamate/uridylate kinase BF28_3864 IPR005260 Aspartate kinase, monofunctional class BF28_3864 IPR001341 Aspartate kinase BF28_3866 IPR001387 Cro/C1-type helix-turn-helix domain BF28_3866 IPR010982 Lambda repressor-like, DNA-binding domain superfamily BF28_3867 IPR004618 Aspartate--ammonia ligase BF28_3867 IPR006195 Aminoacyl-tRNA synthetase, class II BF28_3869 IPR014001 Helicase superfamily 1/2, ATP-binding domain BF28_3869 IPR001650 Helicase, C-terminal BF28_3869 IPR007527 Zinc finger, SWIM-type BF28_3869 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_3869 IPR038718 SNF2-like, N-terminal domain superfamily BF28_3869 IPR000330 SNF2-related, N-terminal domain BF28_387 IPR042106 NADH-ubiquinone/plastoquinone oxidoreductase chain 6, subunit NuoJ BF28_387 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 BF28_3870 IPR011006 CheY-like superfamily BF28_3870 IPR001789 Signal transduction response regulator, receiver domain BF28_3870 IPR013972 YcbB domain BF28_3871 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BF28_3871 IPR005467 Histidine kinase domain BF28_3871 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BF28_3871 IPR003594 Histidine kinase/HSP90-like ATPase BF28_3872 IPR012301 Malic enzyme, N-terminal domain BF28_3872 IPR015884 Malic enzyme, conserved site BF28_3872 IPR036291 NAD(P)-binding domain superfamily BF28_3872 IPR001891 Malic oxidoreductase BF28_3872 IPR012302 Malic enzyme, NAD-binding BF28_3872 IPR037062 Malic enzyme, N-terminal domain superfamily BF28_3873 IPR008948 L-Aspartase-like BF28_3873 IPR022761 Fumarate lyase, N-terminal BF28_3873 IPR000362 Fumarate lyase family BF28_3873 IPR020557 Fumarate lyase, conserved site BF28_3873 IPR018951 Fumarase C, C-terminal BF28_3873 IPR024083 Fumarase/histidase, N-terminal BF28_3873 IPR004708 Aspartate ammonia-lyase BF28_3874 IPR033380 Glutamate-aspartate symport protein GltP/GltT BF28_3874 IPR001991 Sodium:dicarboxylate symporter BF28_3874 IPR018107 Sodium:dicarboxylate symporter, conserved site BF28_3874 IPR036458 Sodium:dicarboxylate symporter superfamily BF28_3875 IPR011817 Uridylate kinase BF28_3875 IPR015963 Uridylate kinase, bacteria BF28_3875 IPR001048 Aspartate/glutamate/uridylate kinase BF28_3875 IPR036393 Acetylglutamate kinase-like superfamily BF28_3876 IPR001736 Phospholipase D/Transphosphatidylase BF28_3876 IPR025202 Phospholipase D-like domain BF28_3876 IPR022924 Cardiolipin synthase BF28_3879 IPR003593 AAA+ ATPase domain BF28_3879 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_3879 IPR017871 ABC transporter, conserved site BF28_3879 IPR003439 ABC transporter-like BF28_388 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like BF28_388 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K BF28_3880 IPR003594 Histidine kinase/HSP90-like ATPase BF28_3880 IPR029016 GAF-like domain superfamily BF28_3880 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain BF28_3880 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BF28_3880 IPR003018 GAF domain BF28_3881 IPR000792 Transcription regulator LuxR, C-terminal BF28_3881 IPR001789 Signal transduction response regulator, receiver domain BF28_3881 IPR016032 Signal transduction response regulator, C-terminal effector BF28_3881 IPR011006 CheY-like superfamily BF28_3886 IPR007383 Protein of unknown function DUF445 BF28_3887 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme BF28_3887 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site BF28_3887 IPR001926 Pyridoxal-phosphate dependent enzyme BF28_3887 IPR011780 D-serine ammonia-lyase BF28_389 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal BF28_389 IPR002128 NADH:ubiquinone/plastoquinone oxidoreductase, chloroplast chain 5, C-terminal BF28_389 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit BF28_389 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup BF28_389 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 BF28_3890 IPR036249 Thioredoxin-like superfamily BF28_3890 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant BF28_3890 IPR013766 Thioredoxin domain BF28_3890 IPR023555 Thiol-disulphide oxidoreductase ResA BF28_3891 IPR003834 Cytochrome C biogenesis protein, transmembrane domain BF28_3895 IPR029062 Class I glutamine amidotransferase-like BF28_3895 IPR005320 Peptidase S51 BF28_3896 IPR002528 Multi antimicrobial extrusion protein BF28_3899 IPR024083 Fumarase/histidase, N-terminal BF28_3899 IPR008948 L-Aspartase-like BF28_3899 IPR022761 Fumarate lyase, N-terminal BF28_3899 IPR000362 Fumarate lyase family BF28_3899 IPR020557 Fumarate lyase, conserved site BF28_3899 IPR018951 Fumarase C, C-terminal BF28_3899 IPR005677 Fumarate hydratase, class II BF28_39 IPR030878 Ribosomal protein L15 BF28_39 IPR036227 Ribosomal L18e/L15P superfamily BF28_39 IPR005749 Ribosomal protein L15, bacterial-type BF28_39 IPR001196 Ribosomal protein L15, conserved site BF28_39 IPR021131 Ribosomal protein L18e/L15P BF28_390 IPR010227 NADH-quinone oxidoreductase, chain M/4 BF28_390 IPR022997 NADH-quinone oxidoreductase chain 4 BF28_390 IPR003918 NADH:ubiquinone oxidoreductase BF28_390 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit BF28_3900 IPR004770 Na+/H+ antiporter NhaC BF28_3900 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal BF28_3901 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BF28_3901 IPR001173 Glycosyltransferase 2-like BF28_3901 IPR029044 Nucleotide-diphospho-sugar transferases BF28_3902 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal BF28_3902 IPR003495 CobW/HypB/UreG, nucleotide-binding domain BF28_3902 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_3903 IPR000620 EamA domain BF28_3904 IPR036390 Winged helix DNA-binding domain superfamily BF28_3904 IPR000485 AsnC-type HTH domain BF28_3904 IPR011711 GntR, C-terminal BF28_3904 IPR008920 Transcription regulator FadR/GntR, C-terminal BF28_3904 IPR000524 Transcription regulator HTH, GntR BF28_3904 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_3906 IPR036837 Cation efflux protein, cytoplasmic domain superfamily BF28_3906 IPR027470 Cation efflux protein, cytoplasmic domain BF28_3906 IPR027469 Cation efflux transmembrane domain superfamily BF28_3906 IPR002524 Cation efflux protein BF28_391 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit BF28_391 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 BF28_3910 IPR029055 Nucleophile aminohydrolases, N-terminal BF28_3910 IPR033738 Asparagine synthase, N-terminal domain BF28_3910 IPR017932 Glutamine amidotransferase type 2 domain BF28_3910 IPR001962 Asparagine synthase BF28_3910 IPR006426 Asparagine synthase, glutamine-hydrolyzing BF28_3912 IPR036390 Winged helix DNA-binding domain superfamily BF28_3912 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_3912 IPR000835 MarR-type HTH domain BF28_3914 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase BF28_3914 IPR000073 Alpha/beta hydrolase fold-1 BF28_3914 IPR029058 Alpha/Beta hydrolase fold BF28_3916 IPR029033 Histidine phosphatase superfamily BF28_3916 IPR013078 Histidine phosphatase superfamily, clade-1 BF28_3918 IPR015956 Penicillin-binding protein, C-terminal domain superfamily BF28_3918 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal BF28_3918 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily BF28_3918 IPR012338 Beta-lactamase/transpeptidase-like BF28_3918 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal BF28_3918 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A BF28_392 IPR009526 Protein of unknown function DUF1146 BF28_3921 IPR019723 Uncharacterised protein, YfmQ BF28_3923 IPR001279 Metallo-beta-lactamase BF28_3923 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BF28_3923 IPR013471 Ribonuclease Z/BN BF28_3924 IPR035906 MetI-like superfamily BF28_3924 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BF28_3924 IPR017661 2-aminoethylphosphonate ABC transport system, membrane component PhnV BF28_3925 IPR041879 YvgL-like, substrate binding domain BF28_3925 IPR005950 Molybdate ABC transporter, substrate-binding protein BF28_3926 IPR013611 Transport-associated OB, type 2 BF28_3926 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit BF28_3926 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_3926 IPR017871 ABC transporter, conserved site BF28_3926 IPR003439 ABC transporter-like BF28_3926 IPR017879 ABC transporter, spermidine/putrescine import ATP-binding protein, PotA BF28_3926 IPR003593 AAA+ ATPase domain BF28_3926 IPR008995 Molybdate/tungstate binding, C-terminal BF28_3931 IPR012610 Small acid-soluble spore protein, SspH BF28_3932 IPR011008 Dimeric alpha-beta barrel BF28_3932 IPR007138 Antibiotic biosynthesis monooxygenase domain BF28_3935 IPR020509 Uncharacterised protein family YnzE BF28_3936 IPR041490 HTH-type transcriptional repressor KstR2, C-terminal BF28_3936 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily BF28_3936 IPR001647 DNA-binding HTH domain, TetR-type BF28_3936 IPR009057 Homeobox-like domain superfamily BF28_394 IPR001986 Enolpyruvate transferase domain BF28_394 IPR036968 Enolpyruvate transferase domain superfamily BF28_394 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta BF28_394 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase BF28_3941 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal BF28_3941 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily BF28_3941 IPR003156 DHHA1 domain BF28_3941 IPR002318 Alanine-tRNA ligase, class IIc BF28_3941 IPR012947 Threonyl/alanyl tRNA synthetase, SAD BF28_3941 IPR018165 Alanyl-tRNA synthetase, class IIc, core domain BF28_3941 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily BF28_3941 IPR009000 Translation protein, beta-barrel domain superfamily BF28_3941 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria BF28_3942 IPR001444 Flagellar basal body rod protein, N-terminal BF28_3942 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like BF28_3942 IPR010930 Flagellar basal-body/hook protein, C-terminal domain BF28_3942 IPR012836 Flagellar basal-body rod FlgF BF28_3942 IPR019776 Flagellar basal body rod protein, conserved site BF28_3942 IPR020013 Flagellar hook-basal body protein, FlgE/F/G BF28_3943 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_3943 IPR003593 AAA+ ATPase domain BF28_3943 IPR020006 Flagellar biosynthesis protein FlhF BF28_3943 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain BF28_3944 IPR042194 FHIPEP, domain 1 BF28_3944 IPR025505 FHIPEP conserved site BF28_3944 IPR042193 FHIPEP, domain 3 BF28_3944 IPR042196 FHIPEP, domain 4 BF28_3944 IPR006301 Flagellar biosynthesis protein FlhA BF28_3944 IPR001712 Type III secretion system FHIPEP BF28_3945 IPR006136 Flagellar biosynthetic protein FlhB BF28_3945 IPR029025 Type III secretion system substrate exporter, C-terminal BF28_3945 IPR006135 Type III secretion system substrate exporter BF28_3947 IPR006305 Flagellar biosynthesis protein FliQ BF28_3947 IPR002191 Bacterial export protein family 3 BF28_3948 IPR005838 Type III secretion system inner membrane P protein BF28_3948 IPR005837 Flagellar transport protein FliP BF28_395 IPR013486 Sporulation stage II protein D, amidase enhancer LytB BF28_395 IPR014225 Sporulation stage II, protein D firmicutes BF28_395 IPR013693 Sporulation stage II protein D, amidase enhancer LytB N-terminal BF28_3950 IPR007597 CheC-like protein BF28_3950 IPR012826 Flagellar motor switch FliN BF28_3950 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb BF28_3950 IPR001543 Surface presentation of antigen (SpoA) BF28_3950 IPR036429 SpoA-like superfamily BF28_3950 IPR028976 CheC-like superfamily BF28_3951 IPR001689 Flagellar motor switch protein FliM BF28_3951 IPR028976 CheC-like superfamily BF28_3951 IPR036429 SpoA-like superfamily BF28_3951 IPR001543 Surface presentation of antigen (SpoA) BF28_3953 IPR008258 Transglycosylase SLT domain 1 BF28_3953 IPR023346 Lysozyme-like domain superfamily BF28_3953 IPR000189 Prokaryotic transglycosylase, active site BF28_3954 IPR001029 Flagellin, D0/D1 domain BF28_3954 IPR042187 Flagellin, C-terminal domain, subdomain 2 BF28_3954 IPR001492 Flagellin BF28_3954 IPR001029 Flagellin, D0/D1 domain BF28_3954 IPR042187 Flagellin, C-terminal domain, subdomain 2 BF28_3954 IPR001492 Flagellin BF28_3955 IPR001492 Flagellin BF28_3955 IPR001029 Flagellin, D0/D1 domain BF28_3956 IPR038245 MogR, N-terminal domain superfamily BF28_3956 IPR021009 Motility repressor MogR, DNA-dinding domain BF28_3957 IPR011006 CheY-like superfamily BF28_3957 IPR002545 CheW-like domain BF28_3957 IPR036061 CheW-like domain superfamily BF28_3957 IPR024181 Chemotaxis response regulator CheV BF28_3957 IPR001789 Signal transduction response regulator, receiver domain BF28_396 IPR001789 Signal transduction response regulator, receiver domain BF28_396 IPR007492 LytTR DNA-binding domain BF28_396 IPR011006 CheY-like superfamily BF28_3960 IPR011491 Flagellar hook protein FlgE BF28_3960 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like BF28_3960 IPR001444 Flagellar basal body rod protein, N-terminal BF28_3960 IPR019776 Flagellar basal body rod protein, conserved site BF28_3960 IPR010930 Flagellar basal-body/hook protein, C-terminal domain BF28_3960 IPR037058 Flagellar hook protein FlgE superfamily BF28_3960 IPR020013 Flagellar hook-basal body protein, FlgE/F/G BF28_3964 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_3964 IPR040627 T3SS EscN ATPase, C-terminal BF28_3964 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain BF28_3964 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site BF28_3964 IPR005714 ATPase, type III secretion system, FliI/YscN BF28_3964 IPR000225 Armadillo BF28_3964 IPR022425 Flagellar export ATPase FliI, clade 2 BF28_3964 IPR032463 ATPase, type III secretion system, FliI BF28_3964 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain BF28_3964 IPR003593 AAA+ ATPase domain BF28_3966 IPR023087 Flagellar motor switch protein FliG, C-terminal BF28_3966 IPR011002 Flagellar motor switch protein FliG, alpha-helical BF28_3966 IPR000090 Flagellar motor switch protein FliG BF28_3966 IPR028263 Flagellar motor switch protein FliG, N-terminal domain BF28_3966 IPR032779 Flagellar motor switch protein FliG, middle domain BF28_3967 IPR006182 Secretory protein YscJ/FliF BF28_3967 IPR000067 Flagellar M-ring protein FliF BF28_3967 IPR013556 Flagellar M-ring C-terminal BF28_3968 IPR001624 Flagellar hook-basal body complex protein FliE BF28_3969 IPR001444 Flagellar basal body rod protein, N-terminal BF28_3969 IPR010930 Flagellar basal-body/hook protein, C-terminal domain BF28_3969 IPR019776 Flagellar basal body rod protein, conserved site BF28_3969 IPR006299 Flagellar basal-body rod protein FlgC BF28_397 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_397 IPR017871 ABC transporter, conserved site BF28_397 IPR003439 ABC transporter-like BF28_397 IPR003593 AAA+ ATPase domain BF28_3970 IPR001444 Flagellar basal body rod protein, N-terminal BF28_3970 IPR006300 Flagellar basal-body rod protein FlgB BF28_3973 IPR010810 Flagellin hook, IN motif BF28_3973 IPR003481 Flagellar hook-associated protein 2, N-terminal BF28_3973 IPR040026 Flagellar hook-associated protein 2 BF28_3973 IPR010809 Flagellar hook-associated protein 2, C-terminal BF28_3974 IPR001029 Flagellin, D0/D1 domain BF28_3974 IPR013384 Flagellar hook-associated protein 3 BF28_3975 IPR010930 Flagellar basal-body/hook protein, C-terminal domain BF28_3975 IPR002371 Flagellar hook-associated protein 1 BF28_3975 IPR001444 Flagellar basal body rod protein, N-terminal BF28_3979 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BF28_3979 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal BF28_3979 IPR000780 MCP methyltransferase, CheR-type BF28_3979 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal BF28_3982 IPR007597 CheC-like protein BF28_3982 IPR036429 SpoA-like superfamily BF28_3982 IPR028976 CheC-like superfamily BF28_3982 IPR012826 Flagellar motor switch FliN BF28_3982 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb BF28_3982 IPR001543 Surface presentation of antigen (SpoA) BF28_3983 IPR036641 HPT domain superfamily BF28_3983 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain BF28_3983 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BF28_3983 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BF28_3983 IPR003594 Histidine kinase/HSP90-like ATPase BF28_3983 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily BF28_3983 IPR037052 Chemotaxis protein CheA, P2 response regulator-binding domain superfamily BF28_3983 IPR004105 Histidine kinase CheA-like, homodimeric domain BF28_3983 IPR035891 CheY-binding domain of CheA BF28_3983 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BF28_3983 IPR005467 Histidine kinase domain BF28_3983 IPR002545 CheW-like domain BF28_3983 IPR036061 CheW-like domain superfamily BF28_3983 IPR010808 Chemotaxis protein CheA, P2 response regulator-binding BF28_3984 IPR011006 CheY-like superfamily BF28_3984 IPR001789 Signal transduction response regulator, receiver domain BF28_3985 IPR025713 Motility protein B, N-terminal domain BF28_3985 IPR006665 OmpA-like domain BF28_3985 IPR036737 OmpA-like domain superfamily BF28_3986 IPR000540 Flagellar motor protein MotA, conserved site BF28_3986 IPR002898 MotA/TolQ/ExbB proton channel BF28_3988 IPR005001 RNA-binding protein Hfq BF28_3988 IPR010920 LSM domain superfamily BF28_399 IPR016047 Peptidase M23 BF28_399 IPR011055 Duplicated hybrid motif BF28_3999 IPR016446 Flavin oxidoreductase Frp family BF28_3999 IPR000415 Nitroreductase-like BF28_3999 IPR029479 Nitroreductase BF28_40 IPR005996 Ribosomal protein L30, bacterial-type BF28_40 IPR018038 Ribosomal protein L30, conserved site BF28_40 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain BF28_40 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily BF28_4001 IPR003848 Domain of unknown function DUF218 BF28_4001 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BF28_4002 IPR023090 UPF0702, alpha/beta domain superfamily BF28_4002 IPR007353 Protein of unknown function DUF421 BF28_4004 IPR010499 Bacterial transcription activator, effector binding BF28_4004 IPR009061 Putative DNA-binding domain superfamily BF28_4004 IPR029442 GyrI-like small molecule binding domain BF28_4004 IPR000551 MerR-type HTH domain BF28_4004 IPR011256 Regulatory factor, effector binding domain superfamily BF28_4005 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BF28_4005 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain BF28_4005 IPR001279 Metallo-beta-lactamase BF28_4005 IPR001587 Ribonuclease J, conserved site BF28_4005 IPR042173 Ribonuclease J, domain 2 BF28_4005 IPR030854 Ribonuclease J, bacteria BF28_4005 IPR041636 Ribonuclease J, C-terminal BF28_4005 IPR004613 Ribonuclease J BF28_4006 IPR006153 Cation/H+ exchanger BF28_4006 IPR004771 K+/H+ exchanger BF28_4006 IPR038770 Sodium/solute symporter superfamily BF28_4008 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BF28_4008 IPR015424 Pyridoxal phosphate-dependent transferase BF28_4008 IPR005814 Aminotransferase class-III BF28_4008 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BF28_4009 IPR038377 Sodium/glucose symporter superfamily BF28_4009 IPR001734 Sodium/solute symporter BF28_4009 IPR018212 Sodium/solute symporter, conserved site BF28_4010 IPR007436 Protein of unknown function DUF485 BF28_4013 IPR001123 Amino acid exporter protein, LeuE-type BF28_4014 IPR014988 Uncharacterised protein family, YqcI/YcgG BF28_4015 IPR012340 Nucleic acid-binding, OB-fold BF28_4015 IPR002059 Cold-shock protein, DNA-binding BF28_4015 IPR012156 Cold shock, CspA BF28_4015 IPR011129 Cold shock domain BF28_4015 IPR019844 Cold-shock (CSD) domain BF28_4020 IPR014718 Glycoside hydrolase-type carbohydrate-binding BF28_4020 IPR011013 Galactose mutarotase-like domain superfamily BF28_4020 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase BF28_4020 IPR037481 Protein LacX BF28_4021 IPR012337 Ribonuclease H-like superfamily BF28_4021 IPR002156 Ribonuclease H domain BF28_4021 IPR036397 Ribonuclease H superfamily BF28_4025 IPR016181 Acyl-CoA N-acyltransferase BF28_4025 IPR000182 GNAT domain BF28_4025 IPR041496 YitH, acetyltransferase (GNAT) domain BF28_4028 IPR002421 5'-3' exonuclease, N-terminal BF28_4028 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal BF28_4028 IPR029060 PIN-like domain superfamily BF28_4028 IPR036279 5'-3' exonuclease, C-terminal domain superfamily BF28_4028 IPR020045 DNA polymerase I-like, H3TH domain BF28_4028 IPR008918 Helix-hairpin-helix motif, class 2 BF28_4028 IPR038969 Flap endonuclease BF28_4029 IPR001757 P-type ATPase BF28_4029 IPR006415 P-type ATPase, subfamily IIIB BF28_4029 IPR023214 HAD superfamily BF28_4029 IPR036412 HAD-like superfamily BF28_4029 IPR006068 Cation-transporting P-type ATPase, C-terminal BF28_4029 IPR004014 Cation-transporting P-type ATPase, N-terminal BF28_4029 IPR023299 P-type ATPase, cytoplasmic domain N BF28_4029 IPR018303 P-type ATPase, phosphorylation site BF28_4029 IPR023298 P-type ATPase, transmembrane domain superfamily BF28_4029 IPR008250 P-type ATPase, A domain superfamily BF28_403 IPR011004 Trimeric LpxA-like superfamily BF28_403 IPR001451 Hexapeptide repeat BF28_4031 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain BF28_4031 IPR016185 Pre-ATP-grasp domain superfamily BF28_4034 IPR001763 Rhodanese-like domain BF28_4034 IPR036873 Rhodanese-like domain superfamily BF28_4035 IPR019688 Protein of unknown function DUF2533 BF28_4036 IPR016181 Acyl-CoA N-acyltransferase BF28_4036 IPR000182 GNAT domain BF28_4038 IPR022812 Dynamin superfamily BF28_4038 IPR027094 Mitofusin family BF28_4038 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_4040 IPR007349 Domain of unknown function DUF418 BF28_4041 IPR006043 Xanthine/uracil/vitamin C permease BF28_4041 IPR017588 Uric acid permease UacT-like BF28_4041 IPR006042 Xanthine/uracil permease BF28_4042 IPR010079 Xanthine phosphoribosyltransferase BF28_4042 IPR000836 Phosphoribosyltransferase domain BF28_4042 IPR029057 Phosphoribosyltransferase-like BF28_4043 IPR001714 Peptidase M24, methionine aminopeptidase BF28_4043 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 BF28_4043 IPR036005 Creatinase/aminopeptidase-like BF28_4043 IPR000994 Peptidase M24 BF28_4044 IPR011009 Protein kinase-like domain superfamily BF28_4044 IPR002575 Aminoglycoside phosphotransferase BF28_4046 IPR001333 Peptidase M32, carboxypeptidase Taq BF28_4047 IPR014013 Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type BF28_4047 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_4047 IPR006555 ATP-dependent helicase, C-terminal BF28_4049 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BF28_4049 IPR000241 Putative RNA methylase domain BF28_4049 IPR002052 DNA methylase, N-6 adenine-specific, conserved site BF28_4049 IPR004114 THUMP domain BF28_405 IPR002509 NodB homology domain BF28_405 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel BF28_4050 IPR007793 DivIVA family BF28_4050 IPR019933 DivIVA domain BF28_4050 IPR011229 Cell cycle protein GpsB BF28_4051 IPR010697 YspA SLOG family BF28_4058 IPR019658 Protein of unknown function DUF2515 BF28_4059 IPR011335 Restriction endonuclease type II-like BF28_4059 IPR004612 Holliday junction resolvase RecU BF28_4059 IPR011856 tRNA endonuclease-like domain superfamily BF28_406 IPR018356 Transcription regulator, HTH DeoR-type, conserved site BF28_406 IPR014208 Sporulation stage III, transcriptional regulator SpoIIID BF28_4060 IPR023346 Lysozyme-like domain superfamily BF28_4060 IPR036950 Penicillin binding protein transglycosylase domain BF28_4060 IPR013783 Immunoglobulin-like fold BF28_4060 IPR001264 Glycosyl transferase, family 51 BF28_4060 IPR036116 Fibronectin type III superfamily BF28_4060 IPR003961 Fibronectin type III BF28_4060 IPR001460 Penicillin-binding protein, transpeptidase BF28_4060 IPR012338 Beta-lactamase/transpeptidase-like BF28_4062 IPR003265 HhH-GPD domain BF28_4062 IPR011257 DNA glycosylase BF28_4062 IPR004036 Endonuclease III-like, conserved site-2 BF28_4062 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif BF28_4062 IPR004035 Endonuclease III, iron-sulphur binding site BF28_4062 IPR005759 Endonuclease III BF28_4062 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal BF28_4062 IPR000445 Helix-hairpin-helix motif BF28_4063 IPR034829 DnaD-like domain superfamily BF28_4063 IPR006343 DnaD domain BF28_4063 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_4064 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site BF28_4064 IPR015424 Pyridoxal phosphate-dependent transferase BF28_4064 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BF28_4064 IPR004839 Aminotransferase, class I/classII BF28_4064 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BF28_4066 IPR012190 Uncharacterised conserved protein UCP036698, YpmA BF28_4067 IPR006555 ATP-dependent helicase, C-terminal BF28_4067 IPR013520 Exonuclease, RNase T/DNA polymerase III BF28_4067 IPR006310 3'-5' exonuclease DinG BF28_4067 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain BF28_4067 IPR036397 Ribonuclease H superfamily BF28_4067 IPR012337 Ribonuclease H-like superfamily BF28_4067 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_4067 IPR001650 Helicase, C-terminal BF28_4067 IPR014013 Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type BF28_4067 IPR006935 Helicase/UvrB, N-terminal BF28_4067 IPR014001 Helicase superfamily 1/2, ATP-binding domain BF28_4068 IPR009010 Aspartate decarboxylase-like domain superfamily BF28_4068 IPR003190 Aspartate decarboxylase BF28_4069 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BF28_4069 IPR042176 Pantoate-beta-alanine ligase, C-terminal domain BF28_4069 IPR003721 Pantoate-beta-alanine ligase BF28_4069 IPR004821 Cytidyltransferase-like domain BF28_407 IPR004753 Cell shape determining protein MreB BF28_4070 IPR003700 Ketopantoate hydroxymethyltransferase BF28_4070 IPR040442 Pyruvate kinase-like domain superfamily BF28_4070 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily BF28_4072 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_4072 IPR030855 Bifunctional ligase/repressor BirA BF28_4072 IPR004408 Biotin--acetyl-CoA-carboxylase ligase BF28_4072 IPR004409 Biotin operon repressor, helix-turn-helix domain BF28_4072 IPR003142 Biotin protein ligase, C-terminal BF28_4072 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain BF28_4072 IPR013196 Helix-turn-helix, type 11 BF28_4072 IPR036390 Winged helix DNA-binding domain superfamily BF28_4072 IPR008988 Transcriptional repressor, C-terminal BF28_4073 IPR023068 CCA-adding enzyme, firmicutes BF28_4073 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain BF28_4073 IPR002646 Poly A polymerase, head domain BF28_4073 IPR032810 CCA-adding enzyme, C-terminal BF28_4074 IPR001296 Glycosyl transferase, family 1 BF28_4074 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain BF28_4074 IPR023881 N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA BF28_4075 IPR024078 Putative deacetylase LmbE-like domain superfamily BF28_4075 IPR023842 Bacillithiol biosynthesis deacetylase, BshB1 BF28_4075 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related BF28_4076 IPR004363 Methylglyoxal synthase BF28_4076 IPR018148 Methylglyoxal synthase, active site BF28_4076 IPR011607 Methylglyoxal synthase-like domain BF28_4076 IPR036914 Methylglyoxal synthase-like domain superfamily BF28_4077 IPR036291 NAD(P)-binding domain superfamily BF28_4077 IPR022663 Dihydrodipicolinate reductase, C-terminal BF28_4077 IPR023940 Dihydrodipicolinate reductase BF28_4077 IPR022664 Dihydrodipicolinate reductase, conserved site BF28_4077 IPR000846 Dihydrodipicolinate reductase, N-terminal BF28_4078 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core BF28_4078 IPR012359 NTP pyrophosphohydrolase MazG-related, YpjD BF28_4079 IPR003740 Uncharacterised membrane protein YitT BF28_4079 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal BF28_4079 IPR019264 Domain of unknown function DUF2179 BF28_4081 IPR007395 Putative neutral zinc metallopeptidase BF28_4082 IPR014231 Sporulation protein YpjB BF28_4084 IPR009845 Protein of unknown function DUF1405 BF28_4085 IPR005798 Cytochrome b/b6, C-terminal BF28_4085 IPR027387 Cytochrome b/b6-like domain superfamily BF28_4085 IPR009056 Cytochrome c-like domain BF28_4085 IPR036909 Cytochrome c-like domain superfamily BF28_4085 IPR036150 Cytochrome b/b6, C-terminal domain superfamily BF28_4085 IPR012049 Menaquinone:cytochrome c reductase, cytochrome b/c subunit BF28_4086 IPR016174 Di-haem cytochrome, transmembrane BF28_4086 IPR027387 Cytochrome b/b6-like domain superfamily BF28_4086 IPR005797 Cytochrome b/b6, N-terminal BF28_4087 IPR006311 Twin-arginine translocation pathway, signal sequence BF28_4087 IPR014349 Rieske iron-sulphur protein BF28_4087 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily BF28_4087 IPR017941 Rieske [2Fe-2S] iron-sulphur domain BF28_4088 IPR019615 Protein of unknown function DUF2487 BF28_4089 IPR027393 Virus scaffolding protein, C-terminal BF28_4089 IPR014963 Uncharacterised domain UPF0302, N-terminal BF28_4089 IPR011188 Uncharacterised protein family UPF0302 BF28_4089 IPR038091 UPF0302, N-terminal domain superfamily BF28_4089 IPR014957 IDEAL domain BF28_4090 IPR013026 Tetratricopeptide repeat-containing domain BF28_4090 IPR011990 Tetratricopeptide-like helical domain superfamily BF28_4090 IPR019734 Tetratricopeptide repeat BF28_4091 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site BF28_4091 IPR005861 Histidinol-phosphate aminotransferase family BF28_4091 IPR004839 Aminotransferase, class I/classII BF28_4091 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BF28_4091 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BF28_4091 IPR015424 Pyridoxal phosphate-dependent transferase BF28_4092 IPR016037 3-dehydroquinate synthase AroB BF28_4092 IPR030963 3-dehydroquinate synthase family BF28_4092 IPR030960 3-dehydroquinate synthase domain BF28_4093 IPR020541 Chorismate synthase, conserved site BF28_4093 IPR035904 Chorismate synthase AroC superfamily BF28_4093 IPR000453 Chorismate synthase BF28_4094 IPR023005 Nucleoside diphosphate kinase, active site BF28_4094 IPR001564 Nucleoside diphosphate kinase BF28_4094 IPR036850 Nucleoside diphosphate kinase-like domain superfamily BF28_4094 IPR034907 Nucleoside diphosphate kinase-like domain BF28_4095 IPR008949 Isoprenoid synthase domain superfamily BF28_4095 IPR000092 Polyprenyl synthetase BF28_4095 IPR033749 Polyprenyl synthetase, conserved site BF28_4095 IPR014119 Heptaprenyl diphosphate synthase component II BF28_4096 IPR014122 Demethylmenaquinone methyltransferase BF28_4096 IPR004033 UbiE/COQ5 methyltransferase BF28_4096 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BF28_4096 IPR023576 UbiE/COQ5 methyltransferase, conserved site BF28_4097 IPR009920 Heptaprenyl diphosphate synthase subunit 1 BF28_4098 IPR001474 GTP cyclohydrolase I BF28_4098 IPR018234 GTP cyclohydrolase I, conserved site BF28_4098 IPR020602 GTP cyclohydrolase I domain BF28_4099 IPR020816 Histone-like DNA-binding protein, conserved site BF28_4099 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily BF28_4099 IPR000119 Histone-like DNA-binding protein BF28_41 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BF28_41 IPR000851 Ribosomal protein S5 BF28_41 IPR005712 Ribosomal protein S5, bacterial-type BF28_41 IPR020568 Ribosomal protein S5 domain 2-type fold BF28_41 IPR018192 Ribosomal protein S5, N-terminal, conserved site BF28_41 IPR013810 Ribosomal protein S5, N-terminal BF28_41 IPR005324 Ribosomal protein S5, C-terminal BF28_4100 IPR014201 Sporulation stage IV, protein A BF28_4100 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_4102 IPR020076 Protein of unknown function DUF2768 BF28_4104 IPR036291 NAD(P)-binding domain superfamily BF28_4104 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal BF28_4104 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal BF28_4104 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent BF28_4104 IPR013328 6-phosphogluconate dehydrogenase, domain 2 BF28_4104 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily BF28_4105 IPR031166 EngA-type guanine nucleotide-binding (G) domain BF28_4105 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_4105 IPR006073 GTP binding domain BF28_4105 IPR032859 GTPase Der, C-terminal KH-domain-like BF28_4105 IPR015946 K homology domain-like, alpha/beta BF28_4105 IPR005225 Small GTP-binding protein domain BF28_4105 IPR016484 GTP-binding protein EngA BF28_4107 IPR025918 YIEGIA protein BF28_4109 IPR025414 YpzI-like protein BF28_4110 IPR000262 FMN-dependent dehydrogenase BF28_4110 IPR013785 Aldolase-type TIM barrel BF28_4110 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent BF28_4111 IPR012340 Nucleic acid-binding, OB-fold BF28_4111 IPR022967 RNA-binding domain, S1 BF28_4111 IPR003029 S1 domain BF28_4112 IPR003136 Cytidylate kinase BF28_4112 IPR011994 Cytidylate kinase domain BF28_4112 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_4114 IPR027474 L-asparaginase, N-terminal BF28_4114 IPR037152 L-asparaginase, N-terminal domain superfamily BF28_4114 IPR027473 L-asparaginase, C-terminal BF28_4114 IPR040919 Asparaginase/glutaminase, C-terminal BF28_4114 IPR020827 Asparaginase/glutaminase, active site 1 BF28_4114 IPR006034 Asparaginase/glutaminase-like BF28_4114 IPR036152 Asparaginase/glutaminase-like superfamily BF28_4114 IPR004550 L-asparaginase, type II BF28_4114 IPR027475 Asparaginase/glutaminase, active site 2 BF28_4115 IPR036188 FAD/NAD(P)-binding domain superfamily BF28_4115 IPR023856 Bacillithiol biosynthesis thiol disulphide oxidoreductase, YpdA BF28_4119 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain BF28_4119 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal BF28_4119 IPR033524 Leu/Phe/Val dehydrogenases active site BF28_4119 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase BF28_4119 IPR014362 Glutamate dehydrogenase BF28_4119 IPR036291 NAD(P)-binding domain superfamily BF28_4119 IPR033922 NAD(P) binding domain of glutamate dehydrogenase BF28_4120 IPR008681 Negative regulator of genetic competence, MecA BF28_4120 IPR038471 MecA, C-terminal domain superfamily BF28_4121 IPR006158 Cobalamin (vitamin B12)-binding domain BF28_4121 IPR036594 Methionine synthase domain BF28_4121 IPR009061 Putative DNA-binding domain superfamily BF28_4121 IPR036724 Cobalamin-binding domain superfamily BF28_4121 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain BF28_4121 IPR000551 MerR-type HTH domain BF28_4122 IPR029052 Metallo-dependent phosphatase-like BF28_4122 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type BF28_4124 IPR003675 CAAX prenyl protease 2 BF28_4125 IPR004589 DNA helicase, ATP-dependent, RecQ type BF28_4125 IPR001650 Helicase, C-terminal BF28_4125 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_4125 IPR002464 DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site BF28_4125 IPR014001 Helicase superfamily 1/2, ATP-binding domain BF28_4125 IPR011545 DEAD/DEAH box helicase domain BF28_4127 IPR001080 3Fe-4S ferredoxin BF28_4127 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BF28_4128 IPR024529 ECF transporter, substrate-specific component BF28_4128 IPR025720 ECF transporter, Riboflavin transporter RibU BF28_4130 IPR016047 Peptidase M23 BF28_4130 IPR011055 Duplicated hybrid motif BF28_4131 IPR036451 Cobalamin adenosyltransferase-like superfamily BF28_4131 IPR016030 Cobalamin adenosyltransferase-like BF28_4131 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type BF28_4132 IPR013767 PAS fold BF28_4132 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BF28_4132 IPR035965 PAS domain superfamily BF28_4132 IPR000014 PAS domain BF28_4132 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BF28_4132 IPR005467 Histidine kinase domain BF28_4132 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BF28_4132 IPR041328 ResE, histidine kinase sensor domain BF28_4132 IPR003660 HAMP domain BF28_4132 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BF28_4132 IPR003594 Histidine kinase/HSP90-like ATPase BF28_4133 IPR001867 OmpR/PhoB-type DNA-binding domain BF28_4133 IPR011006 CheY-like superfamily BF28_4133 IPR001789 Signal transduction response regulator, receiver domain BF28_4133 IPR039420 Transcriptional regulatory protein WalR-like BF28_4133 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_4134 IPR017562 Cytochrome c-type biogenesis protein CcsA BF28_4134 IPR002541 Cytochrome c assembly protein BF28_4135 IPR007816 ResB-like domain BF28_4136 IPR023555 Thiol-disulphide oxidoreductase ResA BF28_4136 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant BF28_4136 IPR036249 Thioredoxin-like superfamily BF28_4136 IPR013766 Thioredoxin domain BF28_4137 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site BF28_4137 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain BF28_4137 IPR020103 Pseudouridine synthase, catalytic domain superfamily BF28_4137 IPR006145 Pseudouridine synthase, RsuA/RluA BF28_4137 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F BF28_4137 IPR002942 RNA-binding S4 domain BF28_4137 IPR036986 RNA-binding S4 domain superfamily BF28_4138 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain BF28_4139 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain BF28_4140 IPR012338 Beta-lactamase/transpeptidase-like BF28_4140 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal BF28_4140 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal BF28_4140 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A BF28_4141 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily BF28_4141 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily BF28_4141 IPR019831 Manganese/iron superoxide dismutase, N-terminal BF28_4141 IPR019832 Manganese/iron superoxide dismutase, C-terminal BF28_4141 IPR019833 Manganese/iron superoxide dismutase, binding site BF28_4141 IPR001189 Manganese/iron superoxide dismutase BF28_4144 IPR024320 Phosphatidylglycerol lysyltransferase, C-terminal BF28_4144 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD BF28_4144 IPR016181 Acyl-CoA N-acyltransferase BF28_4147 IPR035994 Nucleoside phosphorylase superfamily BF28_4147 IPR000845 Nucleoside phosphorylase domain BF28_4147 IPR018016 Nucleoside phosphorylase, conserved site BF28_4147 IPR004402 Purine nucleoside phosphorylase DeoD-type BF28_4148 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BF28_4148 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BF28_4148 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BF28_4148 IPR000014 PAS domain BF28_4148 IPR005467 Histidine kinase domain BF28_4148 IPR003594 Histidine kinase/HSP90-like ATPase BF28_4148 IPR035965 PAS domain superfamily BF28_4148 IPR013767 PAS fold BF28_4148 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BF28_4148 IPR031967 PhoR, single Cache-like domain BF28_4149 IPR011010 DNA breaking-rejoining enzyme, catalytic core BF28_4149 IPR002104 Integrase, catalytic domain BF28_4149 IPR013762 Integrase-like, catalytic domain superfamily BF28_415 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal BF28_415 IPR036291 NAD(P)-binding domain superfamily BF28_415 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily BF28_415 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase BF28_415 IPR017476 UDP-glucose/GDP-mannose dehydrogenase BF28_415 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily BF28_415 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation BF28_415 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal BF28_4151 IPR002763 Protein of unknown function DUF72 BF28_4151 IPR036520 UPF0759 superfamily BF28_4152 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BF28_4152 IPR013767 PAS fold BF28_4152 IPR035965 PAS domain superfamily BF28_4152 IPR000700 PAS-associated, C-terminal BF28_4152 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BF28_4152 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BF28_4152 IPR005467 Histidine kinase domain BF28_4152 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BF28_4152 IPR003660 HAMP domain BF28_4152 IPR000014 PAS domain BF28_4152 IPR003594 Histidine kinase/HSP90-like ATPase BF28_4155 IPR012338 Beta-lactamase/transpeptidase-like BF28_4155 IPR001264 Glycosyl transferase, family 51 BF28_4155 IPR023346 Lysozyme-like domain superfamily BF28_4155 IPR001460 Penicillin-binding protein, transpeptidase BF28_4155 IPR036950 Penicillin binding protein transglycosylase domain BF28_4156 IPR038078 PhoU-like domain superfamily BF28_4156 IPR018445 Putative phosphate transport regulator BF28_4157 IPR001204 Phosphate transporter BF28_4158 IPR002781 Transmembrane protein TauE-like BF28_416 IPR000412 ABC-2 transporter BF28_416 IPR013525 ABC-2 type transporter BF28_4161 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain BF28_4161 IPR017927 FAD-binding domain, ferredoxin reductase-type BF28_4161 IPR017938 Riboflavin synthase-like beta-barrel BF28_4161 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase BF28_4161 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain BF28_4161 IPR023950 Flavohemoprotein BF28_4161 IPR012292 Globin/Protoglobin BF28_4161 IPR009050 Globin-like superfamily BF28_4161 IPR000971 Globin BF28_4161 IPR001433 Oxidoreductase FAD/NAD(P)-binding BF28_4166 IPR013216 Methyltransferase type 11 BF28_4166 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BF28_4166 IPR010233 Ubiquinone biosynthesis O-methyltransferase BF28_4168 IPR004685 Branched-chain amino acid transport system II carrier protein BF28_417 IPR003646 SH3-like domain, bacterial-type BF28_417 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_417 IPR015860 ABC transporter, teichoic acids export, TagH BF28_417 IPR017871 ABC transporter, conserved site BF28_417 IPR003593 AAA+ ATPase domain BF28_417 IPR003439 ABC transporter-like BF28_4170 IPR011006 CheY-like superfamily BF28_4170 IPR000792 Transcription regulator LuxR, C-terminal BF28_4170 IPR001789 Signal transduction response regulator, receiver domain BF28_4170 IPR016032 Signal transduction response regulator, C-terminal effector BF28_4171 IPR017202 Sensor histidine kinase LiaS/VraS BF28_4171 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain BF28_4171 IPR003660 HAMP domain BF28_4171 IPR005467 Histidine kinase domain BF28_4171 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BF28_4171 IPR003594 Histidine kinase/HSP90-like ATPase BF28_4172 IPR016975 Cell wall-active antibiotic response protein BF28_4172 IPR024425 Cell wall-active antibiotics response 4TMS YvqF BF28_4175 IPR004770 Na+/H+ antiporter NhaC BF28_4175 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal BF28_4177 IPR033380 Glutamate-aspartate symport protein GltP/GltT BF28_4177 IPR018107 Sodium:dicarboxylate symporter, conserved site BF28_4177 IPR036458 Sodium:dicarboxylate symporter superfamily BF28_4177 IPR001991 Sodium:dicarboxylate symporter BF28_4179 IPR037272 Sodium:neurotransmitter symporter superfamily BF28_4179 IPR000175 Sodium:neurotransmitter symporter BF28_418 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain BF28_418 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like BF28_4180 IPR036291 NAD(P)-binding domain superfamily BF28_4180 IPR006367 Sirohaem synthase, N-terminal BF28_4180 IPR028161 Siroheme biosynthesis protein Met8 BF28_4181 IPR002762 Cobalamin (vitamin B12) biosynthesis CbiX BF28_4182 IPR014777 Tetrapyrrole methylase, subdomain 1 BF28_4182 IPR000878 Tetrapyrrole methylase BF28_4182 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site BF28_4182 IPR006366 Uroporphyrin-III C-methyltransferase BF28_4182 IPR035996 Tetrapyrrole methylase superfamily BF28_4182 IPR014776 Tetrapyrrole methylase, subdomain 2 BF28_4184 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain BF28_4184 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site BF28_4184 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain BF28_4184 IPR012798 Cobalamin (vitamin B12) biosynthesis CobG-like BF28_4184 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily BF28_4185 IPR002891 Adenylyl-sulfate kinase BF28_4185 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_4186 IPR024951 Sulphate adenylyltransferase catalytic domain BF28_4186 IPR002650 Sulphate adenylyltransferase BF28_4186 IPR025980 ATP-sulfurylase PUA-like domain BF28_4186 IPR020792 Sulphate adenylyltransferase, prokaryotic-type BF28_4186 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BF28_4186 IPR015947 PUA-like superfamily BF28_4187 IPR011798 Adenosine 5'-phosphosulphate reductase BF28_4187 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase BF28_4187 IPR002500 Phosphoadenosine phosphosulphate reductase BF28_4187 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BF28_4189 IPR000183 Ornithine/DAP/Arg decarboxylase BF28_4189 IPR002986 Diaminopimelate decarboxylase, LysA BF28_4189 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site BF28_4189 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal BF28_4189 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal BF28_4189 IPR029066 PLP-binding barrel BF28_4189 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal BF28_4189 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site BF28_419 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ BF28_419 IPR029069 HotDog domain superfamily BF28_419 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ BF28_4191 IPR017850 Alkaline-phosphatase-like, core domain superfamily BF28_4191 IPR012160 Lipoteichoic acid synthase-like BF28_4191 IPR000917 Sulfatase, N-terminal BF28_4192 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase BF28_4192 IPR000462 CDP-alcohol phosphatidyltransferase BF28_4193 IPR036291 NAD(P)-binding domain superfamily BF28_4193 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain BF28_4193 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BF28_4195 IPR010140 Histidinol phosphate phosphatase, HisJ BF28_4195 IPR016195 Polymerase/histidinol phosphatase-like BF28_4195 IPR004013 PHP domain BF28_4196 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase BF28_4196 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like BF28_4197 IPR026660 Phosphoribosyl-AMP cyclohydrolase BF28_4197 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain BF28_4197 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily BF28_4198 IPR004651 Histidine biosynthesis, HisF BF28_4198 IPR013785 Aldolase-type TIM barrel BF28_4198 IPR011060 Ribulose-phosphate binding barrel BF28_4198 IPR006062 Histidine biosynthesis BF28_4199 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA BF28_4199 IPR013785 Aldolase-type TIM barrel BF28_4199 IPR011060 Ribulose-phosphate binding barrel BF28_4199 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase BF28_4199 IPR006062 Histidine biosynthesis BF28_42 IPR005484 Ribosomal protein L18 BF28_42 IPR004389 Ribosomal protein L18, bacterial-type BF28_4200 IPR010139 Imidazole glycerol phosphate synthase, subunit H BF28_4200 IPR017926 Glutamine amidotransferase BF28_4200 IPR029062 Class I glutamine amidotransferase-like BF28_4201 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily BF28_4201 IPR000807 Imidazoleglycerol-phosphate dehydratase BF28_4201 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site BF28_4201 IPR020568 Ribosomal protein S5 domain 2-type fold BF28_4202 IPR016161 Aldehyde/histidinol dehydrogenase BF28_4202 IPR022695 Histidinol dehydrogenase, monofunctional BF28_4202 IPR012131 Histidinol dehydrogenase BF28_4202 IPR001692 Histidinol dehydrogenase, conserved site BF28_4203 IPR001348 ATP phosphoribosyltransferase HisG BF28_4203 IPR024893 ATP phosphoribosyltransferase HisG, short form BF28_4203 IPR018198 ATP phosphoribosyltransferase, conserved site BF28_4203 IPR013820 ATP phosphoribosyltransferase, catalytic domain BF28_4204 IPR006195 Aminoacyl-tRNA synthetase, class II BF28_4204 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain BF28_4204 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit BF28_4204 IPR004517 ATP phosphoribosyltransferase regulatory subunit BF28_4205 IPR033940 3-isopropylmalate dehydratase, swivel domain BF28_4205 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain BF28_4205 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel BF28_4205 IPR004431 3-isopropylmalate dehydratase, small subunit BF28_4206 IPR018136 Aconitase family, 4Fe-4S cluster binding site BF28_4206 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain BF28_4206 IPR033941 3-Isopropylmalate dehydratase, catalytic domain BF28_4206 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 BF28_4206 IPR036008 Aconitase, iron-sulfur domain BF28_4206 IPR004430 3-isopropylmalate dehydratase, large subunit BF28_4207 IPR004429 Isopropylmalate dehydrogenase BF28_4207 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site BF28_4207 IPR024084 Isopropylmalate dehydrogenase-like domain BF28_4208 IPR005671 2-isopropylmalate synthase, bacterial-type BF28_4208 IPR000891 Pyruvate carboxyltransferase BF28_4208 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain BF28_4208 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site BF28_4208 IPR013785 Aldolase-type TIM barrel BF28_4208 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily BF28_4209 IPR036291 NAD(P)-binding domain superfamily BF28_4209 IPR014359 Ketol-acid reductoisomerase, prokaryotic BF28_4209 IPR013116 Ketol-acid reductoisomerase, N-terminal BF28_4209 IPR000506 Ketol-acid reductoisomerase, C-terminal BF28_4209 IPR013023 Ketol-acid reductoisomerase BF28_4209 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily BF28_421 IPR004474 Cell envelope-related transcriptional attenuator domain BF28_421 IPR023734 Polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase TagU BF28_4210 IPR004789 Acetolactate synthase, small subunit BF28_4210 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal BF28_4210 IPR019455 Acetolactate synthase, small subunit, C-terminal BF28_4210 IPR039557 AHAS, ACT domain BF28_4210 IPR002912 ACT domain BF28_4211 IPR012000 Thiamine pyrophosphate enzyme, central domain BF28_4211 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain BF28_4211 IPR012846 Acetolactate synthase, large subunit, biosynthetic BF28_4211 IPR039368 Acetolactate synthase large subunit, TPP binding domain BF28_4211 IPR029035 DHS-like NAD/FAD-binding domain superfamily BF28_4211 IPR029061 Thiamin diphosphate-binding fold BF28_4211 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding BF28_4212 IPR005785 Branched-chain amino acid aminotransferase I BF28_4212 IPR033939 Branched-chain aminotransferase BF28_4212 IPR018300 Aminotransferase, class IV, conserved site BF28_4212 IPR001544 Aminotransferase class IV BF28_4212 IPR036038 Aminotransferase-like, PLP-dependent enzymes BF28_4214 IPR005370 Uncharacterised protein family UPF0180 BF28_4216 IPR014229 Sporulation protein YtfJ BF28_4218 IPR004772 TrkH potassium transport family BF28_4218 IPR003445 Cation transporter BF28_4219 IPR018107 Sodium:dicarboxylate symporter, conserved site BF28_4219 IPR036458 Sodium:dicarboxylate symporter superfamily BF28_4219 IPR001991 Sodium:dicarboxylate symporter BF28_4219 IPR033380 Glutamate-aspartate symport protein GltP/GltT BF28_422 IPR036291 NAD(P)-binding domain superfamily BF28_422 IPR005886 UDP-glucose 4-epimerase BF28_422 IPR016040 NAD(P)-binding domain BF28_4221 IPR000835 MarR-type HTH domain BF28_4221 IPR036390 Winged helix DNA-binding domain superfamily BF28_4221 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_4224 IPR003824 Undecaprenyl-diphosphatase UppP BF28_4225 IPR002528 Multi antimicrobial extrusion protein BF28_4229 IPR011009 Protein kinase-like domain superfamily BF28_4229 IPR002575 Aminoglycoside phosphotransferase BF28_423 IPR001789 Signal transduction response regulator, receiver domain BF28_423 IPR011006 CheY-like superfamily BF28_423 IPR039420 Transcriptional regulatory protein WalR-like BF28_423 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_423 IPR016032 Signal transduction response regulator, C-terminal effector BF28_423 IPR001867 OmpR/PhoB-type DNA-binding domain BF28_4232 IPR029039 Flavoprotein-like superfamily BF28_4232 IPR001226 Flavodoxin, conserved site BF28_4232 IPR001094 Flavodoxin-like BF28_4232 IPR010087 Flavodoxin, short chain BF28_4232 IPR008254 Flavodoxin/nitric oxide synthase BF28_4234 IPR036264 Bacterial exopeptidase dimerisation domain BF28_4234 IPR011650 Peptidase M20, dimerisation domain BF28_4234 IPR002933 Peptidase M20 BF28_4234 IPR017439 Amidohydrolase BF28_4236 IPR042099 AMP-dependent synthetase-like superfamily BF28_4236 IPR010072 D-alanine--D-alanyl carrier protein ligase BF28_4236 IPR000873 AMP-dependent synthetase/ligase BF28_4236 IPR020845 AMP-binding, conserved site BF28_4236 IPR025110 AMP-binding enzyme, C-terminal domain BF28_4236 IPR010071 Amino acid adenylation domain BF28_4237 IPR024024 D-alanyl transfer protein DltB BF28_4237 IPR004299 Membrane bound O-acyl transferase, MBOAT BF28_4237 IPR024194 Alginate O-acetyltransferase AlgI/D-alanyl transfer protein DltB BF28_4238 IPR009081 Phosphopantetheine binding ACP domain BF28_4238 IPR003230 D-alanyl carrier protein BF28_4238 IPR036736 ACP-like superfamily BF28_4239 IPR006998 DltD BF28_4239 IPR023896 D-alanyl-lipoteichoic acid biosynthesis DltD, Firmicutes BF28_424 IPR005467 Histidine kinase domain BF28_424 IPR003594 Histidine kinase/HSP90-like ATPase BF28_424 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BF28_424 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BF28_424 IPR031967 PhoR, single Cache-like domain BF28_424 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BF28_424 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BF28_424 IPR013767 PAS fold BF28_424 IPR035965 PAS domain superfamily BF28_424 IPR000014 PAS domain BF28_4240 IPR004136 Nitronate monooxygenase BF28_4240 IPR013785 Aldolase-type TIM barrel BF28_4241 IPR003507 Peptidase family S66 BF28_4241 IPR029062 Class I glutamine amidotransferase-like BF28_4241 IPR040921 LD-carboxypeptidase, C-terminal BF28_4241 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal BF28_4241 IPR040449 LD-carboxypeptidase, N-terminal BF28_4241 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily BF28_4243 IPR000868 Isochorismatase-like BF28_4243 IPR036380 Isochorismatase-like superfamily BF28_4245 IPR019888 Transcription regulator AsnC-type BF28_4245 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain BF28_4245 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_4245 IPR000485 AsnC-type HTH domain BF28_4245 IPR011008 Dimeric alpha-beta barrel BF28_4245 IPR036390 Winged helix DNA-binding domain superfamily BF28_4247 IPR003675 CAAX prenyl protease 2 BF28_4249 IPR003593 AAA+ ATPase domain BF28_4249 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_4249 IPR017871 ABC transporter, conserved site BF28_4249 IPR003439 ABC transporter-like BF28_4251 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_4251 IPR003439 ABC transporter-like BF28_4251 IPR003593 AAA+ ATPase domain BF28_4252 IPR000524 Transcription regulator HTH, GntR BF28_4252 IPR036390 Winged helix DNA-binding domain superfamily BF28_4252 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_4253 IPR030475 Ribonucleotide reductase small subunit, acitve site BF28_4253 IPR000358 Ribonucleotide reductase small subunit family BF28_4253 IPR009078 Ferritin-like superfamily BF28_4253 IPR012348 Ribonucleotide reductase-like BF28_4253 IPR026494 Ribonucleoside reductase subunit beta, NrdF BF28_4253 IPR033909 Ribonucleotide reductase small subunit BF28_4254 IPR039718 Ribonucleoside-diphosphate reductase large subunit BF28_4254 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal BF28_4254 IPR013554 Ribonucleotide reductase N-terminal BF28_4254 IPR013346 Ribonucleotide reductase, class I , alpha subunit BF28_4254 IPR013509 Ribonucleotide reductase large subunit, N-terminal BF28_4254 IPR000788 Ribonucleotide reductase large subunit, C-terminal BF28_4254 IPR026459 Ribonucleotide reductase, class 1b, subunit NrdE BF28_4255 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal BF28_4255 IPR039718 Ribonucleoside-diphosphate reductase large subunit BF28_4255 IPR013509 Ribonucleotide reductase large subunit, N-terminal BF28_4255 IPR013554 Ribonucleotide reductase N-terminal BF28_4255 IPR000788 Ribonucleotide reductase large subunit, C-terminal BF28_4255 IPR013346 Ribonucleotide reductase, class I , alpha subunit BF28_4255 IPR026459 Ribonucleotide reductase, class 1b, subunit NrdE BF28_4256 IPR029039 Flavoprotein-like superfamily BF28_4256 IPR020852 Ribonucleotide reductase, class Ib, NrdI, bacterial BF28_4256 IPR004465 Ribonucleotide reductase Class Ib, NrdI BF28_4262 IPR018690 Protein of unknown function DUF2187 BF28_4263 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF BF28_4263 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 BF28_4264 IPR017742 7-carboxy-7-deazaguanine synthase BF28_4264 IPR013785 Aldolase-type TIM barrel BF28_4264 IPR024924 7-carboxy-7-deazaguanine synthase-like BF28_4264 IPR007197 Radical SAM BF28_4265 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily BF28_4265 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family BF28_4266 IPR018317 Queuosine biosynthesis protein QueC BF28_4266 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BF28_4267 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BF28_4267 IPR003594 Histidine kinase/HSP90-like ATPase BF28_4267 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BF28_4267 IPR013767 PAS fold BF28_4267 IPR035965 PAS domain superfamily BF28_4267 IPR000014 PAS domain BF28_4267 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BF28_4267 IPR005467 Histidine kinase domain BF28_4267 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BF28_4269 IPR034660 DinB/YfiT-like putative metalloenzymes BF28_4269 IPR024775 DinB-like domain BF28_427 IPR021159 Glycerate/sugar phosphate transporter, conserved site BF28_427 IPR036259 MFS transporter superfamily BF28_427 IPR020846 Major facilitator superfamily domain BF28_427 IPR000849 Sugar phosphate transporter BF28_427 IPR005267 Glycerol-3-phosphate transporter BF28_427 IPR011701 Major facilitator superfamily BF28_4271 IPR000835 MarR-type HTH domain BF28_4271 IPR023187 Transcriptional regulator MarR-type, conserved site BF28_4271 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_4271 IPR036390 Winged helix DNA-binding domain superfamily BF28_4272 IPR003594 Histidine kinase/HSP90-like ATPase BF28_4272 IPR029151 Periplasmic sensor-like domain superfamily BF28_4272 IPR005467 Histidine kinase domain BF28_4272 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BF28_4272 IPR033479 Double Cache domain 1 BF28_4272 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BF28_4272 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BF28_4272 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BF28_4273 IPR018540 Aspartyl-phosphate phosphatase Spo0E-like BF28_4273 IPR037208 Aspartyl-phosphate phosphatase Spo0E-like superfamily BF28_4274 IPR006837 Divergent polysaccharide deacetylase BF28_4274 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel BF28_4276 IPR001303 Class II aldolase/adducin N-terminal BF28_4276 IPR036409 Class II aldolase/adducin N-terminal domain superfamily BF28_4276 IPR017714 Methylthioribulose-1-phosphate dehydratase BF28_4277 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain BF28_4277 IPR001119 S-layer homology domain BF28_4279 IPR014036 DeoR C-terminal sensor domain BF28_4279 IPR037171 NagB/RpiA transferase-like BF28_4279 IPR018356 Transcription regulator, HTH DeoR-type, conserved site BF28_4279 IPR001034 DeoR-type HTH domain BF28_4279 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_4279 IPR036390 Winged helix DNA-binding domain superfamily BF28_4281 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BF28_4281 IPR000192 Aminotransferase class V domain BF28_4281 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase BF28_4281 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BF28_4281 IPR012703 2-aminoethylphosphonate--pyruvate transaminase BF28_4281 IPR015424 Pyridoxal phosphate-dependent transferase BF28_4282 IPR023198 Phosphoglycolate phosphatase-like, domain 2 BF28_4282 IPR023214 HAD superfamily BF28_4282 IPR041492 Haloacid dehalogenase-like hydrolase BF28_4282 IPR006439 HAD hydrolase, subfamily IA BF28_4282 IPR036412 HAD-like superfamily BF28_4282 IPR006323 Phosphonoacetaldehyde hydrolase BF28_4283 IPR035906 MetI-like superfamily BF28_4283 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BF28_4284 IPR014769 ABC transporter, sulphate/thiosulphate import, ATP-binding protein CysA, C-terminal BF28_4284 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_4284 IPR008995 Molybdate/tungstate binding, C-terminal BF28_4284 IPR017666 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT2 BF28_4284 IPR017871 ABC transporter, conserved site BF28_4284 IPR003439 ABC transporter-like BF28_4284 IPR003593 AAA+ ATPase domain BF28_4284 IPR013611 Transport-associated OB, type 2 BF28_4285 IPR026045 Ferric binding protein BF28_4288 IPR003445 Cation transporter BF28_4290 IPR029058 Alpha/Beta hydrolase fold BF28_4290 IPR000073 Alpha/beta hydrolase fold-1 BF28_4290 IPR010125 Poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit BF28_4291 IPR002347 Short-chain dehydrogenase/reductase SDR BF28_4291 IPR036291 NAD(P)-binding domain superfamily BF28_4291 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase BF28_4295 IPR002539 MaoC-like dehydratase domain BF28_4295 IPR029069 HotDog domain superfamily BF28_4296 IPR001448 Small acid-soluble spore protein, alpha/beta-type BF28_4296 IPR038300 SASP, alpha/beta-type superfamily BF28_4296 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site BF28_4297 IPR004772 TrkH potassium transport family BF28_4297 IPR003445 Cation transporter BF28_4298 IPR036259 MFS transporter superfamily BF28_4298 IPR005496 Integral membrane protein TerC BF28_4298 IPR022493 Integral membrane YkoY BF28_4299 IPR024002 Formate/nitrite transporter, conserved site BF28_4299 IPR000292 Formate/nitrite transporter BF28_4299 IPR023271 Aquaporin-like BF28_43 IPR019906 Ribosomal protein L6, bacterial-type BF28_43 IPR020040 Ribosomal protein L6, alpha-beta domain BF28_43 IPR002358 Ribosomal protein L6, conserved site BF28_43 IPR000702 Ribosomal protein L6 BF28_43 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily BF28_4301 IPR000045 Prepilin type IV endopeptidase, peptidase domain BF28_4301 IPR010627 Peptidase A24A, N-terminal BF28_4302 IPR037171 NagB/RpiA transferase-like BF28_4302 IPR022823 Lactate utilization protein C BF28_4302 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily BF28_4302 IPR003741 LUD domain BF28_4303 IPR009051 Alpha-helical ferredoxin BF28_4303 IPR004452 4Fe-4S binding protein BF28_4303 IPR024569 4Fe-4S binding protein, C-terminal BF28_4303 IPR037171 NagB/RpiA transferase-like BF28_4303 IPR022825 Lactate utilization protein B BF28_4303 IPR003741 LUD domain BF28_4303 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BF28_4303 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BF28_4303 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily BF28_4304 IPR004017 Cysteine-rich domain BF28_4304 IPR022822 Lactate utilization protein A BF28_4305 IPR008920 Transcription regulator FadR/GntR, C-terminal BF28_4305 IPR000524 Transcription regulator HTH, GntR BF28_4305 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_4305 IPR036390 Winged helix DNA-binding domain superfamily BF28_4305 IPR011711 GntR, C-terminal BF28_4306 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BF28_4306 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BF28_4306 IPR000014 PAS domain BF28_4306 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BF28_4306 IPR013767 PAS fold BF28_4306 IPR003660 HAMP domain BF28_4306 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BF28_4306 IPR005467 Histidine kinase domain BF28_4306 IPR041328 ResE, histidine kinase sensor domain BF28_4306 IPR035965 PAS domain superfamily BF28_4306 IPR003594 Histidine kinase/HSP90-like ATPase BF28_4307 IPR001789 Signal transduction response regulator, receiver domain BF28_4307 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_4307 IPR001867 OmpR/PhoB-type DNA-binding domain BF28_4307 IPR039420 Transcriptional regulatory protein WalR-like BF28_4307 IPR011006 CheY-like superfamily BF28_4309 IPR025736 PucR C-terminal helix-turn-helix domain BF28_4309 IPR008599 Putative sugar diacid recognition BF28_4309 IPR041522 CdaR, GGDEF-like domain BF28_4309 IPR042070 PucR C-terminal helix-turn-helix domain superfamily BF28_431 IPR003593 AAA+ ATPase domain BF28_431 IPR017871 ABC transporter, conserved site BF28_431 IPR003439 ABC transporter-like BF28_431 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_4310 IPR036318 FAD-binding, type PCMH-like superfamily BF28_4310 IPR016164 FAD-linked oxidase-like, C-terminal BF28_4310 IPR006094 FAD linked oxidase, N-terminal BF28_4310 IPR004490 Glycolate oxidase subunit GlcD BF28_4310 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 BF28_4310 IPR004113 FAD-linked oxidase, C-terminal BF28_4310 IPR016166 FAD-binding domain, PCMH-type BF28_4311 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BF28_4311 IPR009051 Alpha-helical ferredoxin BF28_4311 IPR012257 Glycolate oxidase, iron-sulphur subunit BF28_4311 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BF28_4311 IPR004017 Cysteine-rich domain BF28_4312 IPR035940 CAP superfamily BF28_4312 IPR014258 CAP domain, YkwD-like BF28_4312 IPR014044 CAP domain BF28_4314 IPR002942 RNA-binding S4 domain BF28_4314 IPR020103 Pseudouridine synthase, catalytic domain superfamily BF28_4314 IPR006145 Pseudouridine synthase, RsuA/RluA BF28_4314 IPR036986 RNA-binding S4 domain superfamily BF28_4314 IPR006225 Pseudouridine synthase, RluC/RluD BF28_4314 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site BF28_4316 IPR000731 Sterol-sensing domain BF28_4316 IPR004869 Membrane transport protein MMPL domain BF28_4318 IPR006059 Bacterial extracellular solute-binding protein BF28_4318 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein BF28_4319 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BF28_4319 IPR035906 MetI-like superfamily BF28_432 IPR003838 ABC transporter permease protein domain BF28_432 IPR025857 MacB-like periplasmic core domain BF28_432 IPR005085 Carbohydrate binding module family 25 BF28_4320 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BF28_4320 IPR035906 MetI-like superfamily BF28_4321 IPR017879 ABC transporter, spermidine/putrescine import ATP-binding protein, PotA BF28_4321 IPR003439 ABC transporter-like BF28_4321 IPR017871 ABC transporter, conserved site BF28_4321 IPR003593 AAA+ ATPase domain BF28_4321 IPR008995 Molybdate/tungstate binding, C-terminal BF28_4321 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_4321 IPR013611 Transport-associated OB, type 2 BF28_4322 IPR016160 Aldehyde dehydrogenase, cysteine active site BF28_4322 IPR016163 Aldehyde dehydrogenase, C-terminal BF28_4322 IPR016161 Aldehyde/histidinol dehydrogenase BF28_4322 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent BF28_4322 IPR029510 Aldehyde dehydrogenase, glutamic acid active site BF28_4322 IPR015590 Aldehyde dehydrogenase domain BF28_4322 IPR016162 Aldehyde dehydrogenase, N-terminal BF28_4323 IPR012300 Peptidase M6, InhA BF28_4323 IPR008757 Peptidase M6-like, domain BF28_4324 IPR036281 SinR repressor/SinI anti-repressor, dimerisation domain superfamily BF28_4324 IPR010981 SinR repressor/SinI anti-repressor, dimerisation domain BF28_4324 IPR001387 Cro/C1-type helix-turn-helix domain BF28_4324 IPR010982 Lambda repressor-like, DNA-binding domain superfamily BF28_4325 IPR023833 Signal peptide, camelysin BF28_4325 IPR022121 Peptidase M73, camelysin BF28_4327 IPR023833 Signal peptide, camelysin BF28_4327 IPR022121 Peptidase M73, camelysin BF28_4328 IPR001733 Peptidase S26B BF28_4328 IPR036286 LexA/Signal peptidase-like superfamily BF28_4329 IPR012338 Beta-lactamase/transpeptidase-like BF28_4329 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A BF28_4329 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal BF28_4329 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal BF28_433 IPR006977 Yip1 domain BF28_4331 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BF28_4331 IPR023553 Uncharacterised methyltransferase, YrrT BF28_4331 IPR041698 Methyltransferase domain 25 BF28_434 IPR006977 Yip1 domain BF28_4349 IPR010982 Lambda repressor-like, DNA-binding domain superfamily BF28_4349 IPR001387 Cro/C1-type helix-turn-helix domain BF28_435 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_435 IPR000943 RNA polymerase sigma-70 BF28_435 IPR014284 RNA polymerase sigma-70 like domain BF28_435 IPR014209 RNA polymerase sigma-K type BF28_435 IPR013325 RNA polymerase sigma factor, region 2 BF28_435 IPR007630 RNA polymerase sigma-70 region 4 BF28_435 IPR007627 RNA polymerase sigma-70 region 2 BF28_435 IPR013324 RNA polymerase sigma factor, region 3/4-like BF28_4350 IPR029061 Thiamin diphosphate-binding fold BF28_4350 IPR005475 Transketolase-like, pyrimidine-binding domain BF28_4350 IPR001017 Dehydrogenase, E1 component BF28_4350 IPR042179 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal domain superfamily BF28_4350 IPR011603 2-oxoglutarate dehydrogenase E1 component BF28_4350 IPR023784 2-oxoglutarate dehydrogenase E1 component, bacterial BF28_4350 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal BF28_4351 IPR036625 E3-binding domain superfamily BF28_4351 IPR006255 Dihydrolipoamide succinyltransferase BF28_4351 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily BF28_4351 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site BF28_4351 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain BF28_4351 IPR004167 Peripheral subunit-binding domain BF28_4351 IPR011053 Single hybrid motif BF28_4351 IPR000089 Biotin/lipoyl attachment BF28_4355 IPR004033 UbiE/COQ5 methyltransferase BF28_4355 IPR023576 UbiE/COQ5 methyltransferase, conserved site BF28_4355 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BF28_4358 IPR023536 Coenzyme A disulphide reductase, staphyolococci BF28_4358 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BF28_4358 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily BF28_4358 IPR023753 FAD/NAD(P)-binding domain BF28_4358 IPR036188 FAD/NAD(P)-binding domain superfamily BF28_4358 IPR017758 Coenzyme A disulphide reductase BF28_4362 IPR019268 Protein of unknown function DUF2278 BF28_4363 IPR003804 L-lactate permease BF28_4365 IPR013785 Aldolase-type TIM barrel BF28_4365 IPR011060 Ribulose-phosphate binding barrel BF28_4365 IPR018204 Tryptophan synthase, alpha chain, active site BF28_4365 IPR002028 Tryptophan synthase, alpha chain BF28_4366 IPR023026 Tryptophan synthase beta chain/beta chain-like BF28_4366 IPR006654 Tryptophan synthase, beta chain BF28_4366 IPR001926 Pyridoxal-phosphate dependent enzyme BF28_4366 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme BF28_4366 IPR006653 Tryptophan synthase, beta chain, conserved site BF28_4367 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) BF28_4367 IPR011060 Ribulose-phosphate binding barrel BF28_4367 IPR013785 Aldolase-type TIM barrel BF28_4368 IPR011060 Ribulose-phosphate binding barrel BF28_4368 IPR001468 Indole-3-glycerol phosphate synthase, conserved site BF28_4368 IPR013798 Indole-3-glycerol phosphate synthase BF28_4368 IPR013785 Aldolase-type TIM barrel BF28_4369 IPR005940 Anthranilate phosphoribosyl transferase BF28_4369 IPR017459 Glycosyl transferase family 3, N-terminal domain BF28_4369 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily BF28_4369 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily BF28_4369 IPR000312 Glycosyl transferase, family 3 BF28_4370 IPR005940 Anthranilate phosphoribosyl transferase BF28_4370 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily BF28_4370 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain BF28_4370 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily BF28_4370 IPR017459 Glycosyl transferase family 3, N-terminal domain BF28_4370 IPR000312 Glycosyl transferase, family 3 BF28_4370 IPR017926 Glutamine amidotransferase BF28_4370 IPR029062 Class I glutamine amidotransferase-like BF28_4372 IPR001734 Sodium/solute symporter BF28_4372 IPR018212 Sodium/solute symporter, conserved site BF28_4372 IPR038377 Sodium/glucose symporter superfamily BF28_4372 IPR011851 Sodium/proline symporter BF28_4373 IPR008964 Invasin/intimin cell-adhesion fragments BF28_4373 IPR003343 Bacterial Ig-like, group 2 BF28_4376 IPR000801 Putative esterase BF28_4376 IPR029058 Alpha/Beta hydrolase fold BF28_4377 IPR009097 Cyclic phosphodiesterase BF28_4377 IPR022932 Putative phosphoesterase YjcG BF28_4378 IPR016181 Acyl-CoA N-acyltransferase BF28_4378 IPR000182 GNAT domain BF28_4378 IPR039143 Glucosamine 6-phosphate N-acetyltransferase BF28_4379 IPR005751 ATP-dependent DNA helicase PcrA BF28_4379 IPR034739 UvrD/AddA helicase, N-terminal BF28_4379 IPR014016 UvrD-like helicase, ATP-binding domain BF28_4379 IPR000212 DNA helicase, UvrD/REP type BF28_4379 IPR014017 UvrD-like DNA helicase, C-terminal BF28_4379 IPR013986 DExx box DNA helicase domain superfamily BF28_4379 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_4382 IPR010773 Mycobacterium phage PG1, Gp7 BF28_4385 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) BF28_4385 IPR036291 NAD(P)-binding domain superfamily BF28_4385 IPR002347 Short-chain dehydrogenase/reductase SDR BF28_4386 IPR005913 dTDP-4-dehydrorhamnose reductase family BF28_4386 IPR036291 NAD(P)-binding domain superfamily BF28_4386 IPR029903 RmlD-like substrate binding domain BF28_4387 IPR036291 NAD(P)-binding domain superfamily BF28_4387 IPR016040 NAD(P)-binding domain BF28_4387 IPR005888 dTDP-glucose 4,6-dehydratase BF28_4388 IPR011051 RmlC-like cupin domain superfamily BF28_4388 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related BF28_4388 IPR014710 RmlC-like jelly roll fold BF28_4389 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form BF28_4389 IPR005835 Nucleotidyl transferase domain BF28_4389 IPR029044 Nucleotide-diphospho-sugar transferases BF28_4393 IPR029044 Nucleotide-diphospho-sugar transferases BF28_4393 IPR001173 Glycosyltransferase 2-like BF28_4393 IPR013026 Tetratricopeptide repeat-containing domain BF28_4393 IPR011990 Tetratricopeptide-like helical domain superfamily BF28_4393 IPR019734 Tetratricopeptide repeat BF28_4395 IPR008884 Macrocin-O-methyltransferase BF28_4395 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BF28_4396 IPR013216 Methyltransferase type 11 BF28_4396 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BF28_4397 IPR001173 Glycosyltransferase 2-like BF28_4397 IPR029044 Nucleotide-diphospho-sugar transferases BF28_4398 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site BF28_4398 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA BF28_4398 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB BF28_4399 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type BF28_4399 IPR029052 Metallo-dependent phosphatase-like BF28_4399 IPR041780 PrpE-like, metallophosphatase domain BF28_4399 IPR023937 Bis(5'-nucleosyl)-tetraphosphatase PrpE BF28_44 IPR035987 Ribosomal protein S8 superfamily BF28_44 IPR000630 Ribosomal protein S8 BF28_4401 IPR006145 Pseudouridine synthase, RsuA/RluA BF28_4401 IPR006225 Pseudouridine synthase, RluC/RluD BF28_4401 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site BF28_4401 IPR020103 Pseudouridine synthase, catalytic domain superfamily BF28_4401 IPR002942 RNA-binding S4 domain BF28_4402 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal BF28_4402 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily BF28_4402 IPR002504 NAD kinase BF28_4402 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal BF28_4403 IPR007685 RelA/SpoT BF28_4404 IPR020908 Uncharacterised protein family UPF0738 BF28_4405 IPR009195 Uncharacterised protein family YjbK BF28_4405 IPR023577 CYTH domain BF28_4405 IPR033469 CYTH-like domain superfamily BF28_4406 IPR012292 Globin/Protoglobin BF28_4406 IPR001486 Truncated hemoglobin BF28_4406 IPR019795 Globin, bacterial-like, conserved site BF28_4406 IPR009050 Globin-like superfamily BF28_4409 IPR013647 Oligopeptidase F, N-terminal domain BF28_4409 IPR004438 Peptidase M3B, oligoendopeptidase F BF28_4409 IPR001567 Peptidase M3A/M3B catalytic domain BF28_4409 IPR042088 Oligoendopeptidase F, C-terminal domain BF28_441 IPR000330 SNF2-related, N-terminal domain BF28_441 IPR001650 Helicase, C-terminal BF28_441 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_441 IPR022138 Helicase SWF/SNF-related BF28_441 IPR014001 Helicase superfamily 1/2, ATP-binding domain BF28_441 IPR038718 SNF2-like, N-terminal domain superfamily BF28_4411 IPR030874 Cardiolipin synthase, Firmicutes-type BF28_4411 IPR025202 Phospholipase D-like domain BF28_4411 IPR022924 Cardiolipin synthase BF28_4411 IPR027379 Cardiolipin synthase N-terminal BF28_4411 IPR001736 Phospholipase D/Transphosphatidylase BF28_4412 IPR008681 Negative regulator of genetic competence, MecA BF28_4412 IPR038471 MecA, C-terminal domain superfamily BF28_4413 IPR022301 Integral membrane protein YjbE BF28_4413 IPR005496 Integral membrane protein TerC BF28_4414 IPR023731 Regulatory protein Spx BF28_4414 IPR036249 Thioredoxin-like superfamily BF28_4414 IPR006660 Arsenate reductase-like BF28_4414 IPR006504 Transcriptional regulator Spx/MgsR BF28_4416 IPR030678 Peptide/nickel binding protein, MppA-type BF28_4416 IPR039424 Solute-binding protein family 5 BF28_4416 IPR023765 Solute-binding protein family 5, conserved site BF28_4416 IPR000914 Solute-binding protein family 5 domain BF28_4417 IPR002528 Multi antimicrobial extrusion protein BF28_4418 IPR003593 AAA+ ATPase domain BF28_4418 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_4418 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal BF28_4418 IPR017871 ABC transporter, conserved site BF28_4418 IPR003439 ABC transporter-like BF28_4419 IPR017871 ABC transporter, conserved site BF28_4419 IPR003439 ABC transporter-like BF28_4419 IPR003593 AAA+ ATPase domain BF28_4419 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_4419 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal BF28_442 IPR007527 Zinc finger, SWIM-type BF28_4420 IPR035906 MetI-like superfamily BF28_4420 IPR025966 Oligopeptide transport permease C-like, N-terminal domain BF28_4420 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BF28_4421 IPR035906 MetI-like superfamily BF28_4421 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BF28_4422 IPR030678 Peptide/nickel binding protein, MppA-type BF28_4422 IPR039424 Solute-binding protein family 5 BF28_4422 IPR023765 Solute-binding protein family 5, conserved site BF28_4422 IPR000914 Solute-binding protein family 5 domain BF28_4424 IPR002306 Tryptophan-tRNA ligase BF28_4424 IPR002305 Aminoacyl-tRNA synthetase, class Ic BF28_4424 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site BF28_4424 IPR024109 Tryptophan-tRNA ligase, bacterial-type BF28_4424 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BF28_4425 IPR020909 UPF0736 BF28_4426 IPR018728 Domain of unknown function DUF2268 BF28_4427 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 BF28_4427 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain BF28_4427 IPR014030 Beta-ketoacyl synthase, N-terminal BF28_4427 IPR014031 Beta-ketoacyl synthase, C-terminal BF28_4427 IPR018201 Beta-ketoacyl synthase, active site BF28_4427 IPR000794 Beta-ketoacyl synthase BF28_4427 IPR016039 Thiolase-like BF28_4428 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal BF28_4428 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 BF28_4428 IPR016039 Thiolase-like BF28_4428 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BF28_4429 IPR024558 ComZ BF28_4431 IPR029058 Alpha/Beta hydrolase fold BF28_4433 IPR028299 ClpA/B, conserved site 2 BF28_4433 IPR017730 Chaperonin ClpB BF28_4433 IPR019489 Clp ATPase, C-terminal BF28_4433 IPR036628 Clp, N-terminal domain superfamily BF28_4433 IPR003959 ATPase, AAA-type, core BF28_4433 IPR001270 ClpA/B family BF28_4433 IPR018368 ClpA/B, conserved site 1 BF28_4433 IPR003593 AAA+ ATPase domain BF28_4433 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_4433 IPR004176 Clp, N-terminal BF28_4433 IPR041546 ClpA/ClpB, AAA lid domain BF28_4434 IPR025549 YjzC-like protein BF28_4435 IPR006379 HAD-superfamily hydrolase, subfamily IIB BF28_4435 IPR023214 HAD superfamily BF28_4435 IPR036412 HAD-like superfamily BF28_4435 IPR000150 Cof family BF28_4437 IPR024217 Protein of unknown function DUF3813 BF28_4438 IPR003740 Uncharacterised membrane protein YitT BF28_4438 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal BF28_4438 IPR019264 Domain of unknown function DUF2179 BF28_4440 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type BF28_4440 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site BF28_4440 IPR027304 Trigger factor/SurA domain superfamily BF28_4440 IPR023059 Foldase protein PrsA BF28_4441 IPR039566 Conserved virulence factor B, S1 domain BF28_4441 IPR040764 Conserved virulence factor B-like, winged helix domain BF28_4441 IPR012340 Nucleic acid-binding, OB-fold BF28_4441 IPR022967 RNA-binding domain, S1 BF28_4441 IPR003029 S1 domain BF28_4441 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_4441 IPR014464 Conserved virulence factor B BF28_4442 IPR036183 YajQ-like superfamily BF28_4442 IPR035570 UPF0234, N-terminal BF28_4442 IPR035571 UPF0234-like, C-terminal BF28_4442 IPR007551 Protein of unknown function DUF520 BF28_4444 IPR017853 Glycoside hydrolase superfamily BF28_4444 IPR006047 Glycosyl hydrolase, family 13, catalytic domain BF28_4445 IPR018047 Ammonium transporter, conserved site BF28_4445 IPR001905 Ammonium transporter BF28_4445 IPR024041 Ammonium transporter AmtB-like domain BF28_4445 IPR029020 Ammonium/urea transporter BF28_4446 IPR024708 Catalase active site BF28_4446 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 BF28_4446 IPR011614 Catalase core domain BF28_4446 IPR037060 Catalase core domain superfamily BF28_4446 IPR002226 Catalase haem-binding site BF28_4446 IPR010582 Catalase immune-responsive domain BF28_4446 IPR020835 Catalase superfamily BF28_4446 IPR018028 Catalase, mono-functional, haem-containing BF28_4448 IPR006426 Asparagine synthase, glutamine-hydrolyzing BF28_4448 IPR001962 Asparagine synthase BF28_4448 IPR033738 Asparagine synthase, N-terminal domain BF28_4448 IPR017932 Glutamine amidotransferase type 2 domain BF28_4448 IPR029055 Nucleophile aminohydrolases, N-terminal BF28_4450 IPR010899 Protein of unknown function UPF0344 BF28_4451 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BF28_4451 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BF28_4451 IPR015424 Pyridoxal phosphate-dependent transferase BF28_4451 IPR034757 Ornithine aminotransferase, bacterial type BF28_4451 IPR010164 Ornithine aminotransferase BF28_4451 IPR005814 Aminotransferase class-III BF28_4453 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily BF28_4453 IPR011234 Fumarylacetoacetase-like, C-terminal BF28_4454 IPR037208 Aspartyl-phosphate phosphatase Spo0E-like superfamily BF28_4454 IPR018540 Aspartyl-phosphate phosphatase Spo0E-like BF28_4455 IPR019618 Spore germination protein GerPA/GerPF BF28_4456 IPR024255 Spore germination GerPB BF28_4457 IPR019673 Spore germination protein GerPC BF28_4458 IPR017257 Spore germination protein GerPD, predicted BF28_4459 IPR024496 Spore germination protein GerPE BF28_4460 IPR019618 Spore germination protein GerPA/GerPF BF28_4462 IPR034739 UvrD/AddA helicase, N-terminal BF28_4462 IPR014016 UvrD-like helicase, ATP-binding domain BF28_4462 IPR011335 Restriction endonuclease type II-like BF28_4462 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_4462 IPR011604 Exonuclease, phage-type/RecB, C-terminal BF28_4462 IPR000212 DNA helicase, UvrD/REP type BF28_4462 IPR014017 UvrD-like DNA helicase, C-terminal BF28_4462 IPR014152 DNA helicase subunit AddA BF28_4462 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type BF28_4463 IPR014016 UvrD-like helicase, ATP-binding domain BF28_4463 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type BF28_4463 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_4463 IPR014017 UvrD-like DNA helicase, C-terminal BF28_4463 IPR000212 DNA helicase, UvrD/REP type BF28_4463 IPR014140 DNA helicase subunit AddB BF28_4464 IPR019756 Peptidase S26A, signal peptidase I, serine active site BF28_4464 IPR036286 LexA/Signal peptidase-like superfamily BF28_4464 IPR019758 Peptidase S26A, signal peptidase I, conserved site BF28_4464 IPR019533 Peptidase S26 BF28_4464 IPR019757 Peptidase S26A, signal peptidase I, lysine active site BF28_4464 IPR000223 Peptidase S26A, signal peptidase I BF28_4465 IPR015414 Transmembrane protein TMEM64 BF28_4465 IPR032816 SNARE associated Golgi protein BF28_4466 IPR010461 Competence protein ComK BF28_4469 IPR012156 Cold shock, CspA BF28_4469 IPR011129 Cold shock domain BF28_4469 IPR019844 Cold-shock (CSD) domain BF28_4469 IPR002059 Cold-shock protein, DNA-binding BF28_4469 IPR012340 Nucleic acid-binding, OB-fold BF28_447 IPR018392 LysM domain BF28_447 IPR010611 3D domain BF28_447 IPR036908 RlpA-like domain superfamily BF28_447 IPR036779 LysM domain superfamily BF28_4471 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site BF28_4471 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily BF28_4471 IPR040442 Pyruvate kinase-like domain superfamily BF28_4471 IPR039556 ICL/PEPM domain BF28_4471 IPR006254 Isocitrate lyase BF28_4472 IPR011076 Malate synthase-like superfamily BF28_4472 IPR019830 Malate synthase, conserved site BF28_4472 IPR006252 Malate synthase A BF28_4472 IPR001465 Malate synthase BF28_4473 IPR001119 S-layer homology domain BF28_4475 IPR005086 Carbohydrate binding module family 17/28 BF28_4475 IPR001119 S-layer homology domain BF28_4475 IPR008979 Galactose-binding-like domain superfamily BF28_4475 IPR001547 Glycoside hydrolase, family 5 BF28_4475 IPR017853 Glycoside hydrolase superfamily BF28_4475 IPR018087 Glycoside hydrolase, family 5, conserved site BF28_4476 IPR000620 EamA domain BF28_4477 IPR029151 Periplasmic sensor-like domain superfamily BF28_4477 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding BF28_4477 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain BF28_4477 IPR033479 Double Cache domain 1 BF28_4477 IPR003660 HAMP domain BF28_4478 IPR032456 CAAX prenyl protease 1, N-terminal BF28_4478 IPR027057 CAAX prenyl protease 1 BF28_4478 IPR001915 Peptidase M48 BF28_448 IPR018093 BCCT transporter, conserved site BF28_448 IPR000060 BCCT transporter family BF28_4483 IPR039420 Transcriptional regulatory protein WalR-like BF28_4483 IPR001789 Signal transduction response regulator, receiver domain BF28_4483 IPR016032 Signal transduction response regulator, C-terminal effector BF28_4483 IPR011006 CheY-like superfamily BF28_4483 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_4483 IPR001867 OmpR/PhoB-type DNA-binding domain BF28_4484 IPR005467 Histidine kinase domain BF28_4484 IPR003594 Histidine kinase/HSP90-like ATPase BF28_4484 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BF28_4484 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BF28_4484 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BF28_4484 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BF28_4486 IPR020449 Transcription regulator HTH, AraC- type BF28_4486 IPR009057 Homeobox-like domain superfamily BF28_4486 IPR018060 DNA binding HTH domain, AraC-type BF28_4486 IPR018062 HTH domain AraC-type, conserved site BF28_4486 IPR011256 Regulatory factor, effector binding domain superfamily BF28_4486 IPR029442 GyrI-like small molecule binding domain BF28_4486 IPR010499 Bacterial transcription activator, effector binding BF28_4487 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site BF28_4487 IPR039425 RNA polymerase sigma-70 like BF28_4487 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_4487 IPR014296 RNA polymerase sigma-M, bacillaceae BF28_4487 IPR014284 RNA polymerase sigma-70 like domain BF28_4487 IPR013324 RNA polymerase sigma factor, region 3/4-like BF28_4487 IPR013325 RNA polymerase sigma factor, region 2 BF28_4487 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 BF28_4487 IPR007627 RNA polymerase sigma-70 region 2 BF28_4489 IPR003607 HD/PDEase domain BF28_4489 IPR006674 HD domain BF28_4490 IPR029052 Metallo-dependent phosphatase-like BF28_4490 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type BF28_4491 IPR036435 Leukocidin/porin MspA superfamily BF28_4491 IPR003963 Bi-component toxin, staphylococci BF28_4491 IPR016183 Leukocidin/Hemolysin toxin BF28_4492 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain BF28_4492 IPR001119 S-layer homology domain BF28_4494 IPR000873 AMP-dependent synthetase/ligase BF28_4494 IPR025110 AMP-binding enzyme, C-terminal domain BF28_4494 IPR020459 AMP-binding BF28_4494 IPR042099 AMP-dependent synthetase-like superfamily BF28_4494 IPR020845 AMP-binding, conserved site BF28_4496 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain BF28_4496 IPR019491 Lipoate protein ligase, C-terminal BF28_4496 IPR004562 Lipoyltransferase/lipoate-protein ligase BF28_4497 IPR001279 Metallo-beta-lactamase BF28_4497 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BF28_4498 IPR025432 YhfH-like protein BF28_4499 IPR010982 Lambda repressor-like, DNA-binding domain superfamily BF28_4499 IPR000843 LacI-type HTH domain BF28_4499 IPR028082 Periplasmic binding protein-like I BF28_45 IPR023053 Ribosomal protein S14, type Z BF28_45 IPR001209 Ribosomal protein S14 BF28_45 IPR018271 Ribosomal protein S14, conserved site BF28_450 IPR029044 Nucleotide-diphospho-sugar transferases BF28_4500 IPR001034 DeoR-type HTH domain BF28_4500 IPR013196 Helix-turn-helix, type 11 BF28_4500 IPR028349 Protein PafC BF28_4500 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_4500 IPR036390 Winged helix DNA-binding domain superfamily BF28_4500 IPR026881 WYL domain BF28_4502 IPR000182 GNAT domain BF28_4502 IPR016181 Acyl-CoA N-acyltransferase BF28_4505 IPR017500 Phage infection protein, YhgE, N-terminal BF28_4505 IPR017501 Phage infection protein, YhgE, C-terminal BF28_4505 IPR023908 xxxLxxG heptad repeat BF28_4506 IPR009057 Homeobox-like domain superfamily BF28_4506 IPR041490 HTH-type transcriptional repressor KstR2, C-terminal BF28_4506 IPR023772 DNA-binding HTH domain, TetR-type, conserved site BF28_4506 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily BF28_4506 IPR001647 DNA-binding HTH domain, TetR-type BF28_4508 IPR036390 Winged helix DNA-binding domain superfamily BF28_4508 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_4508 IPR005650 BlaI transcriptional regulatory family BF28_4515 IPR000257 Uroporphyrinogen decarboxylase (URO-D) BF28_4515 IPR006361 Uroporphyrinogen decarboxylase HemE BF28_4515 IPR038071 UROD/MetE-like superfamily BF28_4516 IPR023346 Lysozyme-like domain superfamily BF28_4516 IPR036950 Penicillin binding protein transglycosylase domain BF28_4516 IPR001264 Glycosyl transferase, family 51 BF28_4516 IPR001460 Penicillin-binding protein, transpeptidase BF28_4516 IPR012338 Beta-lactamase/transpeptidase-like BF28_4517 IPR007138 Antibiotic biosynthesis monooxygenase domain BF28_4517 IPR011008 Dimeric alpha-beta barrel BF28_4518 IPR005182 Domain of unknown function DUF304 BF28_4518 IPR014529 Uncharacterised conserved protein UCP026631 BF28_4519 IPR005182 Domain of unknown function DUF304 BF28_452 IPR002668 Concentrative nucleoside transporter N-terminal domain BF28_452 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial BF28_452 IPR008276 Concentrative nucleoside transporter BF28_452 IPR011657 Concentrative nucleoside transporter C-terminal domain BF28_4525 IPR001119 S-layer homology domain BF28_4525 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain BF28_4527 IPR014529 Uncharacterised conserved protein UCP026631 BF28_4527 IPR005182 Domain of unknown function DUF304 BF28_4528 IPR005182 Domain of unknown function DUF304 BF28_453 IPR018392 LysM domain BF28_453 IPR000064 Endopeptidase, NLPC/P60 domain BF28_453 IPR036779 LysM domain superfamily BF28_453 IPR038765 Papain-like cysteine peptidase superfamily BF28_4530 IPR041603 YvdT, C-terminal BF28_4530 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily BF28_4530 IPR001647 DNA-binding HTH domain, TetR-type BF28_4530 IPR009057 Homeobox-like domain superfamily BF28_454 IPR018300 Aminotransferase, class IV, conserved site BF28_454 IPR036038 Aminotransferase-like, PLP-dependent enzymes BF28_454 IPR005784 D-amino acid aminotransferase BF28_454 IPR001544 Aminotransferase class IV BF28_4544 IPR024787 EcsC protein BF28_4545 IPR010288 Bacterial ABC transporter EcsB BF28_4546 IPR003593 AAA+ ATPase domain BF28_4546 IPR003439 ABC transporter-like BF28_4546 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_4547 IPR039384 HINT family BF28_4547 IPR019808 Histidine triad, conserved site BF28_4547 IPR001310 Histidine triad (HIT) protein BF28_4547 IPR011146 HIT-like domain BF28_4547 IPR036265 HIT-like superfamily BF28_4548 IPR036191 RRF superfamily BF28_4548 IPR024623 Uncharacterised protein family YtxH BF28_4549 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_4549 IPR023187 Transcriptional regulator MarR-type, conserved site BF28_4549 IPR023488 HTH-type transcriptional regulator Hpr BF28_4549 IPR000835 MarR-type HTH domain BF28_4549 IPR036390 Winged helix DNA-binding domain superfamily BF28_455 IPR017850 Alkaline-phosphatase-like, core domain superfamily BF28_455 IPR012160 Lipoteichoic acid synthase-like BF28_455 IPR000917 Sulfatase, N-terminal BF28_4552 IPR027304 Trigger factor/SurA domain superfamily BF28_4552 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site BF28_4552 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type BF28_4552 IPR023059 Foldase protein PrsA BF28_4553 IPR000212 DNA helicase, UvrD/REP type BF28_4553 IPR014016 UvrD-like helicase, ATP-binding domain BF28_4553 IPR027785 UvrD-like helicase C-terminal domain BF28_4553 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_4555 IPR036259 MFS transporter superfamily BF28_4555 IPR020846 Major facilitator superfamily domain BF28_4555 IPR011701 Major facilitator superfamily BF28_4555 IPR004638 Drug resistance transporter EmrB-like BF28_4556 IPR036259 MFS transporter superfamily BF28_4556 IPR020846 Major facilitator superfamily domain BF28_4556 IPR011701 Major facilitator superfamily BF28_4561 IPR013325 RNA polymerase sigma factor, region 2 BF28_4561 IPR013324 RNA polymerase sigma factor, region 3/4-like BF28_4561 IPR014286 RNA polymerase sigma-70 RpoE type BF28_4561 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_4561 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 BF28_4561 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site BF28_4561 IPR007627 RNA polymerase sigma-70 region 2 BF28_4561 IPR039425 RNA polymerase sigma-70 like BF28_4561 IPR014284 RNA polymerase sigma-70 like domain BF28_4564 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase BF28_4564 IPR031656 Alpha-glycerophosphate oxidase, C-terminal BF28_4564 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily BF28_4564 IPR006076 FAD dependent oxidoreductase BF28_4564 IPR036188 FAD/NAD(P)-binding domain superfamily BF28_4565 IPR005999 Glycerol kinase BF28_4565 IPR018484 Carbohydrate kinase, FGGY, N-terminal BF28_4565 IPR018483 Carbohydrate kinase, FGGY, conserved site BF28_4565 IPR018485 Carbohydrate kinase, FGGY, C-terminal BF28_4565 IPR000577 Carbohydrate kinase, FGGY BF28_4566 IPR023271 Aquaporin-like BF28_4566 IPR000425 Major intrinsic protein BF28_4566 IPR022357 Major intrinsic protein, conserved site BF28_4567 IPR035928 GlpP-like superfamily BF28_4567 IPR006699 Glycerol uptake operon antiterminator BF28_457 IPR019250 Protein of unknown function DUF2227, metal-binding BF28_4572 IPR029058 Alpha/Beta hydrolase fold BF28_4572 IPR000073 Alpha/beta hydrolase fold-1 BF28_4572 IPR000639 Epoxide hydrolase-like BF28_4572 IPR013595 Peptidase S33 tripeptidyl aminopeptidase-like, C-terminal BF28_4574 IPR040702 Response regulator aspartate phosphatase, N-terminal BF28_4574 IPR013026 Tetratricopeptide repeat-containing domain BF28_4574 IPR019734 Tetratricopeptide repeat BF28_4574 IPR011990 Tetratricopeptide-like helical domain superfamily BF28_4574 IPR041617 MalT-like TPR region BF28_4575 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BF28_4575 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain BF28_4575 IPR037523 Vicinal oxygen chelate (VOC) domain BF28_4576 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain BF28_4576 IPR037523 Vicinal oxygen chelate (VOC) domain BF28_4576 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BF28_4582 IPR020873 3'-5' exoribonuclease YhaM BF28_4582 IPR003607 HD/PDEase domain BF28_4582 IPR006674 HD domain BF28_4582 IPR012340 Nucleic acid-binding, OB-fold BF28_4582 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type BF28_4583 IPR038734 Uncharacterized protein YhaN, AAA domain BF28_4583 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_4584 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type BF28_4584 IPR029052 Metallo-dependent phosphatase-like BF28_4584 IPR041796 Mre11 nuclease, N-terminal metallophosphatase domain BF28_4584 IPR014576 Predicted phosphoesterase, YhaO type BF28_4587 IPR022580 Protein of unknown function DUF2639 BF28_459 IPR003804 L-lactate permease BF28_4593 IPR017871 ABC transporter, conserved site BF28_4593 IPR003439 ABC transporter-like BF28_4593 IPR003593 AAA+ ATPase domain BF28_4593 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_4594 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BF28_4594 IPR005467 Histidine kinase domain BF28_4594 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BF28_4594 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BF28_4594 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BF28_4594 IPR003594 Histidine kinase/HSP90-like ATPase BF28_4595 IPR001789 Signal transduction response regulator, receiver domain BF28_4595 IPR001867 OmpR/PhoB-type DNA-binding domain BF28_4595 IPR039420 Transcriptional regulatory protein WalR-like BF28_4595 IPR016032 Signal transduction response regulator, C-terminal effector BF28_4595 IPR011006 CheY-like superfamily BF28_4595 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_4597 IPR035439 UPF0145 domain superfamily BF28_4597 IPR002765 Uncharacterised protein family UPF0145 BF28_46 IPR002132 Ribosomal protein L5 BF28_46 IPR020930 Ribosomal protein L5, bacterial-type BF28_46 IPR031309 Ribosomal protein L5, C-terminal BF28_46 IPR022803 Ribosomal protein L5 domain superfamily BF28_46 IPR020929 Ribosomal protein L5, conserved site BF28_46 IPR031310 Ribosomal protein L5, N-terminal BF28_4602 IPR005467 Histidine kinase domain BF28_4602 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BF28_4602 IPR019247 Histidine kinase BarA, N-terminal BF28_4602 IPR003594 Histidine kinase/HSP90-like ATPase BF28_4602 IPR003660 HAMP domain BF28_4602 IPR011006 CheY-like superfamily BF28_4602 IPR036641 HPT domain superfamily BF28_4602 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain BF28_4602 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BF28_4602 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BF28_4602 IPR001789 Signal transduction response regulator, receiver domain BF28_4602 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BF28_4603 IPR000780 MCP methyltransferase, CheR-type BF28_4603 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal BF28_4603 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal BF28_4603 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BF28_4604 IPR001932 PPM-type phosphatase domain BF28_4604 IPR035965 PAS domain superfamily BF28_4604 IPR036457 PPM-type phosphatase domain superfamily BF28_4604 IPR000014 PAS domain BF28_4606 IPR014322 RNA polymerase sigma-B/F/G type BF28_4606 IPR007624 RNA polymerase sigma-70 region 3 BF28_4606 IPR007627 RNA polymerase sigma-70 region 2 BF28_4606 IPR000943 RNA polymerase sigma-70 BF28_4606 IPR007630 RNA polymerase sigma-70 region 4 BF28_4606 IPR013325 RNA polymerase sigma factor, region 2 BF28_4606 IPR013324 RNA polymerase sigma factor, region 3/4-like BF28_4606 IPR014284 RNA polymerase sigma-70 like domain BF28_4606 IPR014288 RNA polymerase sigma-B factor BF28_4607 IPR003594 Histidine kinase/HSP90-like ATPase BF28_4607 IPR010193 Serine-protein kinase RsbW BF28_4607 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BF28_4608 IPR036513 STAS domain superfamily BF28_4608 IPR002645 STAS domain BF28_4608 IPR003658 Anti-sigma factor antagonist BF28_4611 IPR036629 YjbJ superfamily BF28_4611 IPR008462 CsbD-like domain BF28_4612 IPR025889 General stress protein 17M-like domain BF28_4617 IPR001119 S-layer homology domain BF28_4622 IPR003607 HD/PDEase domain BF28_4622 IPR037522 HD-GYP domain BF28_4622 IPR003660 HAMP domain BF28_4622 IPR006674 HD domain BF28_4628 IPR012737 Dihydroxyacetone kinase, subunit L BF28_4628 IPR036117 DhaL domain superfamily BF28_4628 IPR004007 DhaL domain BF28_4629 IPR030489 Transcription regulator Rrf2-type, conserved site BF28_4629 IPR036390 Winged helix DNA-binding domain superfamily BF28_4629 IPR000944 Transcription regulator Rrf2-type BF28_4629 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_463 IPR003804 L-lactate permease BF28_4630 IPR023048 NADH-azoreductase, FMN-dependent BF28_4630 IPR029039 Flavoprotein-like superfamily BF28_4630 IPR003680 Flavodoxin-like fold BF28_4631 IPR004006 DhaK domain BF28_4631 IPR012736 Dihydroxyacetone kinase DhaK, subunit 1 BF28_4633 IPR004006 DhaK domain BF28_4633 IPR012736 Dihydroxyacetone kinase DhaK, subunit 1 BF28_4639 IPR000462 CDP-alcohol phosphatidyltransferase BF28_4639 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase BF28_464 IPR037509 Phosphomethylpyrimidine synthase BF28_464 IPR025747 ThiC-associated domain BF28_464 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B BF28_464 IPR038521 ThiC/Bza superfamily BF28_4641 IPR017853 Glycoside hydrolase superfamily BF28_4641 IPR001360 Glycoside hydrolase family 1 BF28_4641 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site BF28_4641 IPR018120 Glycoside hydrolase family 1, active site BF28_4642 IPR003352 Phosphotransferase system, EIIC BF28_4642 IPR001996 Phosphotransferase system, IIB component, type 1 BF28_4642 IPR011297 Phosphotransferase system, beta-glucoside-specific IIABC component BF28_4642 IPR036878 Glucose permease domain IIB BF28_4642 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site BF28_4642 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 BF28_4642 IPR013013 Phosphotransferase system, EIIC component, type 1 BF28_4642 IPR011055 Duplicated hybrid motif BF28_4643 IPR036650 CAT RNA-binding domain superfamily BF28_4643 IPR001550 Transcription antiterminator, conserved site BF28_4643 IPR036634 PRD domain superfamily BF28_4643 IPR011608 PRD domain BF28_4643 IPR004341 CAT RNA-binding domain BF28_4645 IPR001647 DNA-binding HTH domain, TetR-type BF28_4645 IPR009057 Homeobox-like domain superfamily BF28_4645 IPR041646 IcaR, C-terminal BF28_4646 IPR010080 Thioester reductase-like domain BF28_4646 IPR020806 Polyketide synthase, phosphopantetheine-binding domain BF28_4646 IPR036291 NAD(P)-binding domain superfamily BF28_4646 IPR009081 Phosphopantetheine binding ACP domain BF28_4646 IPR013120 Male sterility, NAD-binding BF28_4646 IPR036736 ACP-like superfamily BF28_465 IPR000802 Arsenical pump membrane protein, ArsB BF28_466 IPR003317 Cytochrome ubiquinol oxidase subunit 2 BF28_4660 IPR002781 Transmembrane protein TauE-like BF28_4662 IPR003593 AAA+ ATPase domain BF28_4662 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily BF28_4662 IPR007692 DNA helicase, DnaB type BF28_4662 IPR007694 DNA helicase, DnaB-like, C-terminal BF28_4662 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_4662 IPR007693 DNA helicase, DnaB-like, N-terminal BF28_4662 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal BF28_4664 IPR038735 MSMEG_1276-like, nucleoside triphosphate pyrophosphohydrolase domain BF28_4665 IPR029442 GyrI-like small molecule binding domain BF28_4665 IPR000551 MerR-type HTH domain BF28_4665 IPR011256 Regulatory factor, effector binding domain superfamily BF28_4665 IPR009061 Putative DNA-binding domain superfamily BF28_467 IPR002585 Cytochrome ubiquinol oxidase subunit 1 BF28_4672 IPR010240 Cysteine desulfurase IscS BF28_4672 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site BF28_4672 IPR016454 Cysteine desulfurase BF28_4672 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BF28_4672 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BF28_4672 IPR015424 Pyridoxal phosphate-dependent transferase BF28_4672 IPR000192 Aminotransferase class V domain BF28_4674 IPR038729 Rad50/SbcC-type AAA domain BF28_4674 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_4676 IPR033186 Helicase HerA-like C-terminal BF28_4676 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_4686 IPR041471 UvrB, interaction domain BF28_4686 IPR001650 Helicase, C-terminal BF28_4686 IPR024759 UvrB, YAD/RRR-motif-containing domain BF28_4686 IPR014001 Helicase superfamily 1/2, ATP-binding domain BF28_4686 IPR001943 UVR domain BF28_4686 IPR036876 UVR domain superfamily BF28_4686 IPR004807 UvrABC system, subunit B BF28_4686 IPR006935 Helicase/UvrB, N-terminal BF28_4686 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_469 IPR012341 Six-hairpin glycosidase-like superfamily BF28_469 IPR008928 Six-hairpin glycosidase superfamily BF28_4690 IPR005662 GTP-binding protein Era BF28_4690 IPR006073 GTP binding domain BF28_4690 IPR015946 K homology domain-like, alpha/beta BF28_4690 IPR004044 K Homology domain, type 2 BF28_4690 IPR030388 Era-type guanine nucleotide-binding (G) domain BF28_4690 IPR005225 Small GTP-binding protein domain BF28_4690 IPR009019 K homology domain superfamily, prokaryotic type BF28_4690 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_4692 IPR003593 AAA+ ATPase domain BF28_4692 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal BF28_4692 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_4692 IPR017871 ABC transporter, conserved site BF28_4692 IPR003439 ABC transporter-like BF28_4693 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal BF28_4693 IPR017871 ABC transporter, conserved site BF28_4693 IPR003593 AAA+ ATPase domain BF28_4693 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_4693 IPR003439 ABC transporter-like BF28_4694 IPR035906 MetI-like superfamily BF28_4694 IPR025966 Oligopeptide transport permease C-like, N-terminal domain BF28_4694 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BF28_4695 IPR035906 MetI-like superfamily BF28_4695 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BF28_4696 IPR023765 Solute-binding protein family 5, conserved site BF28_4696 IPR000914 Solute-binding protein family 5 domain BF28_4696 IPR039424 Solute-binding protein family 5 BF28_4696 IPR030678 Peptide/nickel binding protein, MppA-type BF28_47 IPR014722 Ribosomal protein L2, domain 2 BF28_47 IPR041988 Ribosomal Protein L26/L24, KOW domain BF28_47 IPR008991 Translation protein SH3-like domain superfamily BF28_47 IPR005824 KOW BF28_47 IPR003256 Ribosomal protein L24 BF28_47 IPR005825 Ribosomal protein L24/L26, conserved site BF28_470 IPR000847 Transcription regulator HTH, LysR BF28_470 IPR005119 LysR, substrate-binding BF28_470 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_470 IPR036390 Winged helix DNA-binding domain superfamily BF28_4700 IPR036291 NAD(P)-binding domain superfamily BF28_4700 IPR023401 Ornithine cyclodeaminase, N-terminal BF28_4700 IPR003462 Ornithine cyclodeaminase/mu-crystallin BF28_4701 IPR008794 Proline racemase family BF28_4702 IPR022580 Protein of unknown function DUF2639 BF28_4704 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain BF28_4704 IPR001119 S-layer homology domain BF28_4705 IPR008007 Peptidase M42 BF28_4705 IPR023367 Peptidase M42, domain 2 BF28_4709 IPR014748 Enoyl-CoA hydratase, C-terminal BF28_4709 IPR029045 ClpP/crotonase-like domain superfamily BF28_4709 IPR001753 Enoyl-CoA hydratase/isomerase BF28_471 IPR023908 xxxLxxG heptad repeat BF28_471 IPR017500 Phage infection protein, YhgE, N-terminal BF28_471 IPR017501 Phage infection protein, YhgE, C-terminal BF28_4713 IPR004299 Membrane bound O-acyl transferase, MBOAT BF28_4713 IPR028362 Alginate O-acetyltransferase AlgI BF28_4713 IPR024194 Alginate O-acetyltransferase AlgI/D-alanyl transfer protein DltB BF28_4714 IPR024194 Alginate O-acetyltransferase AlgI/D-alanyl transfer protein DltB BF28_4714 IPR028362 Alginate O-acetyltransferase AlgI BF28_4714 IPR004299 Membrane bound O-acyl transferase, MBOAT BF28_4716 IPR001119 S-layer homology domain BF28_4717 IPR032812 SbsA, Ig-like domain BF28_4717 IPR001119 S-layer homology domain BF28_4717 IPR008964 Invasin/intimin cell-adhesion fragments BF28_4717 IPR003343 Bacterial Ig-like, group 2 BF28_4719 IPR002797 Polysaccharide biosynthesis protein BF28_4719 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain BF28_4719 IPR024923 Peptidoglycan biosynthesis protein, SpoVB-type BF28_472 IPR037523 Vicinal oxygen chelate (VOC) domain BF28_472 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain BF28_472 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BF28_4720 IPR000185 Protein translocase subunit SecA BF28_4720 IPR030908 Protein translocase subunit SecA 2, Bacillus anthracis-type BF28_4720 IPR036266 SecA, Wing/Scaffold superfamily BF28_4720 IPR011116 SecA Wing/Scaffold BF28_4720 IPR011130 SecA, preprotein cross-linking domain BF28_4720 IPR036670 SecA, preprotein cross-linking domain superfamily BF28_4720 IPR011115 SecA DEAD-like, N-terminal BF28_4720 IPR020937 SecA conserved site BF28_4720 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_4720 IPR014018 SecA motor DEAD BF28_4724 IPR001902 SLC26A/SulP transporter BF28_4724 IPR011547 SLC26A/SulP transporter domain BF28_4724 IPR002645 STAS domain BF28_4724 IPR036513 STAS domain superfamily BF28_4726 IPR020845 AMP-binding, conserved site BF28_4726 IPR000873 AMP-dependent synthetase/ligase BF28_4726 IPR025110 AMP-binding enzyme, C-terminal domain BF28_4727 IPR007197 Radical SAM BF28_4727 IPR006638 Elp3/MiaB/NifB BF28_4727 IPR034505 Anaerobic coproporphyrinogen-III oxidase BF28_4727 IPR023995 Oxygen-independent coproporphyrinogen-III oxidase-like protein HemZ BF28_4727 IPR023404 Radical SAM, alpha/beta horseshoe BF28_4728 IPR036366 PGBD superfamily BF28_4728 IPR002502 N-acetylmuramoyl-L-alanine amidase domain BF28_4728 IPR002477 Peptidoglycan binding-like BF28_4728 IPR036365 PGBD-like superfamily BF28_4728 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily BF28_4730 IPR000150 Cof family BF28_4730 IPR006379 HAD-superfamily hydrolase, subfamily IIB BF28_4730 IPR023214 HAD superfamily BF28_4730 IPR036412 HAD-like superfamily BF28_4731 IPR003180 Methylpurine-DNA glycosylase BF28_4731 IPR011034 Formyl transferase-like, C-terminal domain superfamily BF28_4731 IPR036995 Methylpurine-DNA glycosylase superfamily BF28_4732 IPR005128 Alpha-acetolactate decarboxylase BF28_4733 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain BF28_4733 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding BF28_4733 IPR012782 Acetolactate synthase, catabolic BF28_4733 IPR029035 DHS-like NAD/FAD-binding domain superfamily BF28_4733 IPR000399 TPP-binding enzyme, conserved site BF28_4733 IPR012000 Thiamine pyrophosphate enzyme, central domain BF28_4733 IPR029061 Thiamin diphosphate-binding fold BF28_474 IPR036458 Sodium:dicarboxylate symporter superfamily BF28_474 IPR018107 Sodium:dicarboxylate symporter, conserved site BF28_474 IPR001991 Sodium:dicarboxylate symporter BF28_474 IPR033380 Glutamate-aspartate symport protein GltP/GltT BF28_4741 IPR011006 CheY-like superfamily BF28_4741 IPR001789 Signal transduction response regulator, receiver domain BF28_4741 IPR016032 Signal transduction response regulator, C-terminal effector BF28_4741 IPR000792 Transcription regulator LuxR, C-terminal BF28_4742 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain BF28_4742 IPR005467 Histidine kinase domain BF28_4742 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BF28_4742 IPR003594 Histidine kinase/HSP90-like ATPase BF28_4744 IPR023378 YheA/YmcA-like domain superfamily BF28_4744 IPR010368 Control of competence regulator ComK, YlbF/YmcA BF28_4745 IPR007383 Protein of unknown function DUF445 BF28_4745 IPR016991 Protein of unknown function UCP032178 BF28_4747 IPR026838 Endospore coat-associated protein YheC/D BF28_4749 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site BF28_4749 IPR038300 SASP, alpha/beta-type superfamily BF28_4749 IPR001448 Small acid-soluble spore protein, alpha/beta-type BF28_475 IPR013012 Phosphotransferase system, EIIB component, type 3 BF28_475 IPR003501 Phosphotransferase system, EIIB component, type 2/3 BF28_475 IPR036095 PTS system IIB component-like superfamily BF28_4750 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_4750 IPR017871 ABC transporter, conserved site BF28_4750 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type BF28_4750 IPR003439 ABC transporter-like BF28_4750 IPR003593 AAA+ ATPase domain BF28_4751 IPR035906 MetI-like superfamily BF28_4751 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BF28_4751 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain BF28_4752 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BF28_4752 IPR018313 Solute-binding protein family 3, conserved site BF28_4753 IPR017871 ABC transporter, conserved site BF28_4753 IPR003439 ABC transporter-like BF28_4753 IPR036640 ABC transporter type 1, transmembrane domain superfamily BF28_4753 IPR011527 ABC transporter type 1, transmembrane domain BF28_4753 IPR003593 AAA+ ATPase domain BF28_4753 IPR039421 Type I protein exporter BF28_4753 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_4754 IPR011527 ABC transporter type 1, transmembrane domain BF28_4754 IPR036640 ABC transporter type 1, transmembrane domain superfamily BF28_4754 IPR003439 ABC transporter-like BF28_4754 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_4754 IPR039421 Type I protein exporter BF28_4754 IPR017871 ABC transporter, conserved site BF28_4754 IPR003593 AAA+ ATPase domain BF28_4755 IPR016161 Aldehyde/histidinol dehydrogenase BF28_4755 IPR016160 Aldehyde dehydrogenase, cysteine active site BF28_4755 IPR016162 Aldehyde dehydrogenase, N-terminal BF28_4755 IPR016163 Aldehyde dehydrogenase, C-terminal BF28_4755 IPR015590 Aldehyde dehydrogenase domain BF28_4756 IPR002293 Amino acid/polyamine transporter I BF28_4758 IPR029062 Class I glutamine amidotransferase-like BF28_4758 IPR020835 Catalase superfamily BF28_4758 IPR011614 Catalase core domain BF28_4758 IPR010582 Catalase immune-responsive domain BF28_4758 IPR018028 Catalase, mono-functional, haem-containing BF28_4758 IPR024708 Catalase active site BF28_4758 IPR002226 Catalase haem-binding site BF28_4758 IPR037060 Catalase core domain superfamily BF28_4758 IPR024712 Catalase, mono-functional, haem-containing, clade 2 BF28_4758 IPR041399 Large catalase, C-terminal domain BF28_4759 IPR002818 DJ-1/PfpI BF28_4759 IPR006286 Deglycase PfpI BF28_4759 IPR029062 Class I glutamine amidotransferase-like BF28_476 IPR004501 Phosphotransferase system, EIIC component, type 3 BF28_476 IPR003352 Phosphotransferase system, EIIC BF28_476 IPR004796 Phosphotransferase system, cellobiose-type IIC component BF28_4761 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG BF28_4761 IPR005829 Sugar transporter, conserved site BF28_4761 IPR036259 MFS transporter superfamily BF28_4761 IPR011701 Major facilitator superfamily BF28_4761 IPR020846 Major facilitator superfamily domain BF28_4762 IPR039424 Solute-binding protein family 5 BF28_4762 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain BF28_4762 IPR000914 Solute-binding protein family 5 domain BF28_4763 IPR029039 Flavoprotein-like superfamily BF28_4763 IPR003680 Flavodoxin-like fold BF28_4765 IPR002577 Helix-turn-helix, HxlR type BF28_4765 IPR036390 Winged helix DNA-binding domain superfamily BF28_4765 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_4766 IPR013149 Alcohol dehydrogenase, C-terminal BF28_4766 IPR020843 Polyketide synthase, enoylreductase domain BF28_4766 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site BF28_4766 IPR011032 GroES-like superfamily BF28_4766 IPR036291 NAD(P)-binding domain superfamily BF28_4766 IPR013154 Alcohol dehydrogenase, N-terminal BF28_4768 IPR036396 Cytochrome P450 superfamily BF28_4768 IPR017972 Cytochrome P450, conserved site BF28_4768 IPR002397 Cytochrome P450, B-class BF28_4768 IPR001128 Cytochrome P450 BF28_4769 IPR009057 Homeobox-like domain superfamily BF28_4769 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily BF28_4769 IPR041612 YfiR, C-terminal BF28_4769 IPR001647 DNA-binding HTH domain, TetR-type BF28_477 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit BF28_477 IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily BF28_4770 IPR029058 Alpha/Beta hydrolase fold BF28_4770 IPR013094 Alpha/beta hydrolase fold-3 BF28_4771 IPR004638 Drug resistance transporter EmrB-like BF28_4771 IPR011701 Major facilitator superfamily BF28_4771 IPR036259 MFS transporter superfamily BF28_4771 IPR020846 Major facilitator superfamily domain BF28_4772 IPR002938 FAD-binding domain BF28_4772 IPR036188 FAD/NAD(P)-binding domain superfamily BF28_4773 IPR036390 Winged helix DNA-binding domain superfamily BF28_4773 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_4773 IPR023187 Transcriptional regulator MarR-type, conserved site BF28_4773 IPR000835 MarR-type HTH domain BF28_4774 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_4774 IPR002577 Helix-turn-helix, HxlR type BF28_4774 IPR036390 Winged helix DNA-binding domain superfamily BF28_4775 IPR004734 Multidrug resistance protein BF28_4775 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG BF28_4775 IPR005829 Sugar transporter, conserved site BF28_4775 IPR036259 MFS transporter superfamily BF28_4775 IPR020846 Major facilitator superfamily domain BF28_4775 IPR011701 Major facilitator superfamily BF28_4776 IPR041603 YvdT, C-terminal BF28_4776 IPR001647 DNA-binding HTH domain, TetR-type BF28_4776 IPR009057 Homeobox-like domain superfamily BF28_4776 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily BF28_4777 IPR000390 Small multidrug resistance protein family BF28_4778 IPR000390 Small multidrug resistance protein family BF28_478 IPR016067 S-adenosylmethionine decarboxylase, core BF28_478 IPR017716 S-adenosylmethionine decarboxylase proenzyme BF28_478 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic BF28_4780 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_4780 IPR011008 Dimeric alpha-beta barrel BF28_4780 IPR019888 Transcription regulator AsnC-type BF28_4780 IPR036390 Winged helix DNA-binding domain superfamily BF28_4780 IPR019885 Transcription regulator HTH, AsnC-type, conserved site BF28_4780 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain BF28_4780 IPR000485 AsnC-type HTH domain BF28_4781 IPR000620 EamA domain BF28_4784 IPR032808 DoxX family BF28_4787 IPR036878 Glucose permease domain IIB BF28_4787 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site BF28_4787 IPR003352 Phosphotransferase system, EIIC BF28_4787 IPR013013 Phosphotransferase system, EIIC component, type 1 BF28_4787 IPR001996 Phosphotransferase system, IIB component, type 1 BF28_4788 IPR003352 Phosphotransferase system, EIIC BF28_4788 IPR001996 Phosphotransferase system, IIB component, type 1 BF28_4788 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site BF28_4788 IPR013013 Phosphotransferase system, EIIC component, type 1 BF28_4788 IPR036878 Glucose permease domain IIB BF28_4789 IPR040190 N-acetylmuramic acid 6-phosphate etherase/glucokinase regulatory protein BF28_4789 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ BF28_4789 IPR005486 Glucokinase regulatory protein, conserved site BF28_4789 IPR001347 Sugar isomerase (SIS) BF28_479 IPR001045 Spermidine/spermine synthases BF28_479 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BF28_479 IPR030373 Polyamine biosynthesis domain, conserved site BF28_479 IPR030374 Polyamine biosynthesis domain BF28_4790 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_4790 IPR000281 Helix-turn-helix protein RpiR BF28_4790 IPR009057 Homeobox-like domain superfamily BF28_4790 IPR035472 RpiR-like, SIS domain BF28_4790 IPR001347 Sugar isomerase (SIS) BF28_4792 IPR006153 Cation/H+ exchanger BF28_4792 IPR004771 K+/H+ exchanger BF28_4792 IPR038770 Sodium/solute symporter superfamily BF28_4793 IPR002293 Amino acid/polyamine transporter I BF28_48 IPR019972 Ribosomal protein L14P, conserved site BF28_48 IPR036853 Ribosomal protein L14 superfamily BF28_48 IPR000218 Ribosomal protein L14P BF28_48 IPR005745 Ribosomal protein L14P, bacterial-type BF28_480 IPR013012 Phosphotransferase system, EIIB component, type 3 BF28_480 IPR003501 Phosphotransferase system, EIIB component, type 2/3 BF28_480 IPR036095 PTS system IIB component-like superfamily BF28_4800 IPR032816 SNARE associated Golgi protein BF28_4802 IPR009187 Non-homologous end joining protein Ku, prokaryotic type BF28_4802 IPR016194 SPOC-like, C-terminal domain superfamily BF28_4802 IPR006164 Ku70/Ku80 beta-barrel domain BF28_4805 IPR020256 Spore coat protein CotJA BF28_4806 IPR016571 Spore coat assembly protein CotJB BF28_4806 IPR024207 Spore coat assembly protein CotJB, domain BF28_4807 IPR039377 Manganese catalase, ferritin-like di-iron-binding domain BF28_4807 IPR012347 Ferritin-like BF28_4807 IPR007760 Manganese catalase BF28_4807 IPR009078 Ferritin-like superfamily BF28_4808 IPR004685 Branched-chain amino acid transport system II carrier protein BF28_4809 IPR003838 ABC transporter permease protein domain BF28_4809 IPR027022 ABC transporter permease protein, BceB-type BF28_481 IPR004501 Phosphotransferase system, EIIC component, type 3 BF28_481 IPR004796 Phosphotransferase system, cellobiose-type IIC component BF28_481 IPR003352 Phosphotransferase system, EIIC BF28_4812 IPR011737 Conserved hypothetical protein CHP02206, TP0381 BF28_4814 IPR017871 ABC transporter, conserved site BF28_4814 IPR003439 ABC transporter-like BF28_4814 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_4814 IPR003593 AAA+ ATPase domain BF28_4815 IPR025857 MacB-like periplasmic core domain BF28_4815 IPR005085 Carbohydrate binding module family 25 BF28_4815 IPR003838 ABC transporter permease protein domain BF28_4816 IPR010611 3D domain BF28_4816 IPR036779 LysM domain superfamily BF28_4816 IPR036908 RlpA-like domain superfamily BF28_4816 IPR018392 LysM domain BF28_4819 IPR004501 Phosphotransferase system, EIIC component, type 3 BF28_4819 IPR004796 Phosphotransferase system, cellobiose-type IIC component BF28_4819 IPR003352 Phosphotransferase system, EIIC BF28_482 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit BF28_482 IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily BF28_4820 IPR003501 Phosphotransferase system, EIIB component, type 2/3 BF28_4820 IPR013012 Phosphotransferase system, EIIB component, type 3 BF28_4820 IPR036095 PTS system IIB component-like superfamily BF28_4821 IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily BF28_4821 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit BF28_4822 IPR011608 PRD domain BF28_4822 IPR036390 Winged helix DNA-binding domain superfamily BF28_4822 IPR013196 Helix-turn-helix, type 11 BF28_4822 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_4822 IPR036634 PRD domain superfamily BF28_4822 IPR016152 Phosphotransferase/anion transporter BF28_4822 IPR007737 Mga helix-turn-helix domain BF28_4822 IPR013011 Phosphotransferase system, EIIB component, type 2 BF28_4822 IPR002178 PTS EIIA type-2 domain BF28_4822 IPR036095 PTS system IIB component-like superfamily BF28_4824 IPR004734 Multidrug resistance protein BF28_4824 IPR020846 Major facilitator superfamily domain BF28_4824 IPR036259 MFS transporter superfamily BF28_4824 IPR011701 Major facilitator superfamily BF28_4824 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG BF28_4825 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein BF28_4825 IPR003841 Sodium-dependent phosphate transport protein BF28_4826 IPR020843 Polyketide synthase, enoylreductase domain BF28_4826 IPR036291 NAD(P)-binding domain superfamily BF28_4826 IPR013149 Alcohol dehydrogenase, C-terminal BF28_4826 IPR014188 Acrylyl-CoA reductase AcuI BF28_4826 IPR013154 Alcohol dehydrogenase, N-terminal BF28_4826 IPR011032 GroES-like superfamily BF28_4827 IPR004474 Cell envelope-related transcriptional attenuator domain BF28_4829 IPR002781 Transmembrane protein TauE-like BF28_483 IPR036291 NAD(P)-binding domain superfamily BF28_483 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal BF28_483 IPR022616 Glycosyl hydrolase, family 4, C-terminal BF28_483 IPR019802 Glycoside hydrolase, family 4, conserved site BF28_483 IPR001088 Glycoside hydrolase, family 4 BF28_4830 IPR032836 DsrE2-like family BF28_4830 IPR027396 DsrEFH-like BF28_4832 IPR001763 Rhodanese-like domain BF28_4832 IPR036873 Rhodanese-like domain superfamily BF28_4833 IPR036868 TusA-like domain superfamily BF28_4833 IPR001455 TusA-like domain BF28_4834 IPR036873 Rhodanese-like domain superfamily BF28_4834 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BF28_4834 IPR001279 Metallo-beta-lactamase BF28_4834 IPR001763 Rhodanese-like domain BF28_4835 IPR001455 TusA-like domain BF28_4835 IPR036873 Rhodanese-like domain superfamily BF28_4835 IPR036868 TusA-like domain superfamily BF28_4835 IPR001763 Rhodanese-like domain BF28_4836 IPR003735 Metal-sensitive transcriptional repressor BF28_4836 IPR038390 Metal-sensitive transcriptional repressor superfamily BF28_4837 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily BF28_4837 IPR017758 Coenzyme A disulphide reductase BF28_4837 IPR036188 FAD/NAD(P)-binding domain superfamily BF28_4837 IPR023536 Coenzyme A disulphide reductase, staphyolococci BF28_4837 IPR023753 FAD/NAD(P)-binding domain BF28_4837 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BF28_4839 IPR007390 Sporulation stage V, protein R BF28_484 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel BF28_484 IPR006879 Carbohydrate deacetylase YdjC-like BF28_484 IPR022948 Chitooligosaccharide deacetylase ChbG-like, bacteria BF28_4840 IPR026021 Putative NAD(P)H nitroreductase YdjA-like BF28_4840 IPR000415 Nitroreductase-like BF28_4840 IPR029479 Nitroreductase BF28_4842 IPR004995 Bacillus/Clostridium Ger spore germination protein BF28_4844 IPR004761 Spore germination GerAB BF28_4846 IPR025431 YhdB-like protein BF28_4847 IPR003752 Disulphide bond formation protein DsbB/BdbC BF28_4847 IPR023380 DsbB-like superfamily BF28_4847 IPR012187 Disulphide bond formation protein BdbC BF28_4848 IPR036249 Thioredoxin-like superfamily BF28_4848 IPR013766 Thioredoxin domain BF28_485 IPR003370 Chromate transporter BF28_485 IPR014047 Chromate transporter, long chain BF28_4851 IPR038063 L,D-transpeptidase catalytic domain-like BF28_4851 IPR005490 L,D-transpeptidase catalytic domain BF28_4851 IPR041597 L,D-transpeptidase C-terminal domain BF28_4852 IPR020904 Short-chain dehydrogenase/reductase, conserved site BF28_4852 IPR036291 NAD(P)-binding domain superfamily BF28_4852 IPR002347 Short-chain dehydrogenase/reductase SDR BF28_4853 IPR026033 Azaguanine-like transporters BF28_4853 IPR006043 Xanthine/uracil/vitamin C permease BF28_4856 IPR023187 Transcriptional regulator MarR-type, conserved site BF28_4856 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_4856 IPR036390 Winged helix DNA-binding domain superfamily BF28_4856 IPR000835 MarR-type HTH domain BF28_4857 IPR020846 Major facilitator superfamily domain BF28_4857 IPR036259 MFS transporter superfamily BF28_4857 IPR011701 Major facilitator superfamily BF28_4858 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal BF28_4858 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BF28_4859 IPR003820 Potassium-transporting ATPase C chain BF28_4860 IPR023298 P-type ATPase, transmembrane domain superfamily BF28_4860 IPR006391 P-type ATPase, B chain, subfamily IA BF28_4860 IPR018303 P-type ATPase, phosphorylation site BF28_4860 IPR036412 HAD-like superfamily BF28_4860 IPR008250 P-type ATPase, A domain superfamily BF28_4860 IPR023299 P-type ATPase, cytoplasmic domain N BF28_4860 IPR023214 HAD superfamily BF28_4860 IPR001757 P-type ATPase BF28_4861 IPR004623 Potassium-transporting ATPase A chain BF28_4865 IPR029056 Ribokinase-like BF28_4865 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase BF28_4865 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase BF28_4866 IPR000594 THIF-type NAD/FAD binding fold BF28_4866 IPR035985 Ubiquitin-activating enzyme BF28_4867 IPR033983 Thiazole synthase ThiG BF28_4867 IPR013785 Aldolase-type TIM barrel BF28_4867 IPR008867 Thiazole synthase BF28_4868 IPR010035 ThiS, thiamine-biosynthesis BF28_4868 IPR003749 Sulfur carrier ThiS/MoaD-like BF28_4868 IPR012675 Beta-grasp domain superfamily BF28_4868 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp BF28_4869 IPR006076 FAD dependent oxidoreductase BF28_4869 IPR036188 FAD/NAD(P)-binding domain superfamily BF28_4869 IPR012727 Glycine oxidase ThiO BF28_487 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_487 IPR036390 Winged helix DNA-binding domain superfamily BF28_487 IPR001550 Transcription antiterminator, conserved site BF28_487 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 BF28_487 IPR003593 AAA+ ATPase domain BF28_487 IPR011608 PRD domain BF28_487 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily BF28_487 IPR004701 Phosphotransferase system, mannose-type IIA component BF28_487 IPR036634 PRD domain superfamily BF28_487 IPR002078 RNA polymerase sigma factor 54 interaction domain BF28_487 IPR033887 PTS system mannose/sorbose specific IIA subunit BF28_4870 IPR022998 Thiamine phosphate synthase/TenI BF28_4870 IPR036206 Thiamin phosphate synthase superfamily BF28_4870 IPR013785 Aldolase-type TIM barrel BF28_4871 IPR015168 SsuA/THI5-like BF28_4871 IPR027939 NMT1/THI5 family BF28_4872 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BF28_4872 IPR035906 MetI-like superfamily BF28_4873 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_4873 IPR017871 ABC transporter, conserved site BF28_4873 IPR003439 ABC transporter-like BF28_4873 IPR003593 AAA+ ATPase domain BF28_4874 IPR004305 Thiaminase-2/PQQC BF28_4874 IPR027574 Thiaminase II BF28_4874 IPR026285 TenA_E protein BF28_4874 IPR016084 Haem oxygenase-like, multi-helical BF28_4875 IPR000834 Peptidase M14, carboxypeptidase A BF28_4875 IPR003646 SH3-like domain, bacterial-type BF28_4878 IPR000644 CBS domain BF28_489 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site BF28_489 IPR000715 Glycosyl transferase, family 4 BF28_49 IPR019984 30S ribosomal protein S17 BF28_49 IPR000266 Ribosomal protein S17/S11 BF28_49 IPR019979 Ribosomal protein S17, conserved site BF28_49 IPR012340 Nucleic acid-binding, OB-fold BF28_490 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation BF28_490 IPR036291 NAD(P)-binding domain superfamily BF28_490 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type BF28_490 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal BF28_490 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily BF28_490 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal BF28_490 IPR017476 UDP-glucose/GDP-mannose dehydrogenase BF28_490 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily BF28_4903 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BF28_4903 IPR001036 Acriflavin resistance protein BF28_4905 IPR035906 MetI-like superfamily BF28_4905 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BF28_4905 IPR005672 Phosphate transport system permease protein PstA BF28_4906 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BF28_4906 IPR011864 Phosphate ABC transporter, permease protein PstC BF28_4906 IPR035906 MetI-like superfamily BF28_4907 IPR024370 PBP domain BF28_4907 IPR011862 Phosphate binding protein BF28_4908 IPR008988 Transcriptional repressor, C-terminal BF28_4908 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_4908 IPR041069 FeoB, cytosolic helical domain BF28_4908 IPR005225 Small GTP-binding protein domain BF28_4908 IPR038157 Ferrous iron transporter, core domain BF28_4908 IPR006073 GTP binding domain BF28_4908 IPR003373 Ferrous iron transport protein B BF28_4908 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain BF28_4908 IPR030389 FeoB-type guanine nucleotide-binding (G) domain BF28_4908 IPR007167 Ferrous iron transporter FeoA domain BF28_4908 IPR011640 Ferrous iron transport protein B, C-terminal BF28_4909 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain BF28_4909 IPR006073 GTP binding domain BF28_4909 IPR011640 Ferrous iron transport protein B, C-terminal BF28_4909 IPR041069 FeoB, cytosolic helical domain BF28_4909 IPR030389 FeoB-type guanine nucleotide-binding (G) domain BF28_4909 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_4909 IPR003373 Ferrous iron transport protein B BF28_491 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain BF28_491 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like BF28_4910 IPR011640 Ferrous iron transport protein B, C-terminal BF28_4910 IPR003373 Ferrous iron transport protein B BF28_4910 IPR030389 FeoB-type guanine nucleotide-binding (G) domain BF28_4910 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_4910 IPR006073 GTP binding domain BF28_4910 IPR041069 FeoB, cytosolic helical domain BF28_4910 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain BF28_4911 IPR038501 Spore germination GerAC superfamily BF28_4911 IPR008844 Spore germination GerAC BF28_4912 IPR004761 Spore germination GerAB BF28_4913 IPR004995 Bacillus/Clostridium Ger spore germination protein BF28_4914 IPR038377 Sodium/glucose symporter superfamily BF28_4914 IPR001734 Sodium/solute symporter BF28_4915 IPR021741 Protein of unknown function DUF3311 BF28_4916 IPR036264 Bacterial exopeptidase dimerisation domain BF28_4916 IPR017439 Amidohydrolase BF28_4916 IPR002933 Peptidase M20 BF28_4916 IPR011650 Peptidase M20, dimerisation domain BF28_4917 IPR039563 Peptidase C39 single domain protein BF28_4917 IPR039564 Peptidase C39-like BF28_4917 IPR016997 Uncharacterised conserved protein UCP032442 BF28_4918 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily BF28_4918 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain BF28_4918 IPR002429 Cytochrome c oxidase subunit II-like C-terminal BF28_4918 IPR006333 Cytochrome o ubiquinol oxidase subunit II BF28_4918 IPR006332 Quinol oxidase subunit II BF28_4918 IPR034227 Ubiquinol oxidase subunit 2, cupredoxin domain BF28_4918 IPR008972 Cupredoxin BF28_4919 IPR014233 Quinol oxidase subunit I BF28_4919 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site BF28_4919 IPR036927 Cytochrome c oxidase-like, subunit I superfamily BF28_4919 IPR023616 Cytochrome c oxidase-like, subunit I domain BF28_4919 IPR000883 Cytochrome c oxidase subunit I BF28_492 IPR004474 Cell envelope-related transcriptional attenuator domain BF28_4920 IPR000298 Cytochrome c oxidase subunit III-like BF28_4920 IPR024791 Cytochrome c oxidase subunit III BF28_4920 IPR035973 Cytochrome c oxidase subunit III-like superfamily BF28_4920 IPR033946 Ubiquinol oxidase subunit III domain BF28_4920 IPR014246 Quinol oxidase subunit III BF28_4920 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle BF28_4922 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily BF28_4922 IPR003148 Regulator of K+ conductance, N-terminal BF28_4922 IPR036291 NAD(P)-binding domain superfamily BF28_4922 IPR006037 Regulator of K+ conductance, C-terminal BF28_4922 IPR038770 Sodium/solute symporter superfamily BF28_4922 IPR006153 Cation/H+ exchanger BF28_4924 IPR000182 GNAT domain BF28_4924 IPR016181 Acyl-CoA N-acyltransferase BF28_4924 IPR039143 Glucosamine 6-phosphate N-acetyltransferase BF28_4927 IPR006043 Xanthine/uracil/vitamin C permease BF28_4927 IPR026033 Azaguanine-like transporters BF28_4928 IPR004841 Amino acid permease/ SLC12A domain BF28_4928 IPR004840 Amino acid permease, conserved site BF28_493 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal BF28_493 IPR020568 Ribosomal protein S5 domain 2-type fold BF28_493 IPR015796 Impact family, bacterial/archaeal BF28_493 IPR023582 Impact family BF28_493 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site BF28_493 IPR035647 EF-G domain III/V-like BF28_493 IPR036956 Impact, N-terminal domain superfamily BF28_493 IPR001498 Impact, N-terminal BF28_4931 IPR004685 Branched-chain amino acid transport system II carrier protein BF28_4932 IPR036259 MFS transporter superfamily BF28_4932 IPR005279 Dipeptide/tripeptide permease BF28_4932 IPR020846 Major facilitator superfamily domain BF28_4932 IPR000109 Proton-dependent oligopeptide transporter family BF28_4932 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site BF28_4933 IPR042007 Sortase A BF28_4933 IPR005754 Sortase family BF28_4933 IPR023365 Sortase domain superfamily BF28_4935 IPR001387 Cro/C1-type helix-turn-helix domain BF28_4935 IPR010982 Lambda repressor-like, DNA-binding domain superfamily BF28_4936 IPR010611 3D domain BF28_4936 IPR036779 LysM domain superfamily BF28_4936 IPR036908 RlpA-like domain superfamily BF28_4936 IPR018392 LysM domain BF28_4937 IPR003660 HAMP domain BF28_4937 IPR029151 Periplasmic sensor-like domain superfamily BF28_4937 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain BF28_4937 IPR033479 Double Cache domain 1 BF28_4938 IPR003824 Undecaprenyl-diphosphatase UppP BF28_494 IPR003797 DegV BF28_4943 IPR005135 Endonuclease/exonuclease/phosphatase BF28_4943 IPR017766 Sphingomyelinase C/phospholipase C BF28_4943 IPR036691 Endonuclease/exonuclease/phosphatase superfamily BF28_4944 IPR001531 Zinc-dependent phospholipase C BF28_4944 IPR029002 Phospholipase C/D BF28_4944 IPR008947 Phospholipase C/P1 nuclease domain superfamily BF28_4948 IPR036291 NAD(P)-binding domain superfamily BF28_4948 IPR011032 GroES-like superfamily BF28_4948 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site BF28_4948 IPR013154 Alcohol dehydrogenase, N-terminal BF28_4948 IPR013149 Alcohol dehydrogenase, C-terminal BF28_4948 IPR020843 Polyketide synthase, enoylreductase domain BF28_495 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_495 IPR002577 Helix-turn-helix, HxlR type BF28_495 IPR036390 Winged helix DNA-binding domain superfamily BF28_4951 IPR012300 Peptidase M6, InhA BF28_4951 IPR008757 Peptidase M6-like, domain BF28_4952 IPR018225 Transaldolase, active site BF28_4952 IPR033919 Transaldolase/Fructose-6-phosphate aldolase, archaeal/bacterial BF28_4952 IPR022999 Transaldolase type 3B, putative BF28_4952 IPR004731 Transaldolase type 3B/Fructose-6-phosphate aldolase BF28_4952 IPR013785 Aldolase-type TIM barrel BF28_4952 IPR001585 Transaldolase/Fructose-6-phosphate aldolase BF28_4953 IPR025997 Periplasmic binding protein BF28_4953 IPR028082 Periplasmic binding protein-like I BF28_4954 IPR001851 ABC transporter, permease BF28_4955 IPR015861 ABC transporter, ribose import, RbsA BF28_4955 IPR017871 ABC transporter, conserved site BF28_4955 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_4955 IPR003593 AAA+ ATPase domain BF28_4955 IPR003439 ABC transporter-like BF28_4956 IPR023064 D-ribose pyranase BF28_4956 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU BF28_4956 IPR023750 RbsD-like superfamily BF28_4957 IPR011611 Carbohydrate kinase PfkB BF28_4957 IPR029056 Ribokinase-like BF28_4957 IPR011877 Ribokinase BF28_4957 IPR002139 Ribokinase/fructokinase BF28_4957 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site BF28_4958 IPR010982 Lambda repressor-like, DNA-binding domain superfamily BF28_4958 IPR028082 Periplasmic binding protein-like I BF28_4958 IPR000843 LacI-type HTH domain BF28_4959 IPR011701 Major facilitator superfamily BF28_4959 IPR020846 Major facilitator superfamily domain BF28_4959 IPR036259 MFS transporter superfamily BF28_4959 IPR005829 Sugar transporter, conserved site BF28_4959 IPR004638 Drug resistance transporter EmrB-like BF28_496 IPR036779 LysM domain superfamily BF28_496 IPR038765 Papain-like cysteine peptidase superfamily BF28_496 IPR000064 Endopeptidase, NLPC/P60 domain BF28_496 IPR018392 LysM domain BF28_4960 IPR000835 MarR-type HTH domain BF28_4960 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_4960 IPR036390 Winged helix DNA-binding domain superfamily BF28_4961 IPR000849 Sugar phosphate transporter BF28_4961 IPR036259 MFS transporter superfamily BF28_4961 IPR005267 Glycerol-3-phosphate transporter BF28_4961 IPR021159 Glycerate/sugar phosphate transporter, conserved site BF28_4961 IPR011701 Major facilitator superfamily BF28_4961 IPR020846 Major facilitator superfamily domain BF28_4962 IPR003439 ABC transporter-like BF28_4962 IPR003593 AAA+ ATPase domain BF28_4962 IPR017871 ABC transporter, conserved site BF28_4962 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_4962 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal BF28_4963 IPR003593 AAA+ ATPase domain BF28_4963 IPR017871 ABC transporter, conserved site BF28_4963 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal BF28_4963 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_4963 IPR003439 ABC transporter-like BF28_4964 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BF28_4964 IPR035906 MetI-like superfamily BF28_4965 IPR035906 MetI-like superfamily BF28_4965 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BF28_4966 IPR023765 Solute-binding protein family 5, conserved site BF28_4966 IPR000914 Solute-binding protein family 5 domain BF28_4966 IPR030678 Peptide/nickel binding protein, MppA-type BF28_4966 IPR039424 Solute-binding protein family 5 BF28_4968 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BF28_4968 IPR006015 Universal stress protein A family BF28_4968 IPR006016 UspA BF28_4969 IPR001902 SLC26A/SulP transporter BF28_4969 IPR002645 STAS domain BF28_4969 IPR036513 STAS domain superfamily BF28_4969 IPR018045 Sulphate anion transporter, conserved site BF28_4969 IPR011547 SLC26A/SulP transporter domain BF28_497 IPR014001 Helicase superfamily 1/2, ATP-binding domain BF28_497 IPR001650 Helicase, C-terminal BF28_497 IPR006935 Helicase/UvrB, N-terminal BF28_497 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_4971 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_4971 IPR039420 Transcriptional regulatory protein WalR-like BF28_4971 IPR011006 CheY-like superfamily BF28_4971 IPR001789 Signal transduction response regulator, receiver domain BF28_4971 IPR016032 Signal transduction response regulator, C-terminal effector BF28_4971 IPR001867 OmpR/PhoB-type DNA-binding domain BF28_4972 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BF28_4972 IPR013767 PAS fold BF28_4972 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BF28_4972 IPR003660 HAMP domain BF28_4972 IPR041328 ResE, histidine kinase sensor domain BF28_4972 IPR000014 PAS domain BF28_4972 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BF28_4972 IPR005467 Histidine kinase domain BF28_4972 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BF28_4972 IPR003594 Histidine kinase/HSP90-like ATPase BF28_4972 IPR035965 PAS domain superfamily BF28_4973 IPR024072 Dihydrofolate reductase-like domain superfamily BF28_4973 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal BF28_4974 IPR026881 WYL domain BF28_4974 IPR028349 Protein PafC BF28_4974 IPR013196 Helix-turn-helix, type 11 BF28_4974 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_4974 IPR036390 Winged helix DNA-binding domain superfamily BF28_4974 IPR001034 DeoR-type HTH domain BF28_4979 IPR004840 Amino acid permease, conserved site BF28_4979 IPR004841 Amino acid permease/ SLC12A domain BF28_498 IPR005222 Competence protein ComF BF28_498 IPR000836 Phosphoribosyltransferase domain BF28_498 IPR029057 Phosphoribosyltransferase-like BF28_4980 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain BF28_4980 IPR035906 MetI-like superfamily BF28_4980 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BF28_4981 IPR035906 MetI-like superfamily BF28_4981 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BF28_4981 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain BF28_4982 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BF28_4982 IPR001320 Ionotropic glutamate receptor BF28_4982 IPR018313 Solute-binding protein family 3, conserved site BF28_4983 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_4983 IPR017871 ABC transporter, conserved site BF28_4983 IPR003439 ABC transporter-like BF28_4983 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type BF28_4983 IPR003593 AAA+ ATPase domain BF28_4984 IPR001463 Sodium:alanine symporter BF28_4985 IPR002575 Aminoglycoside phosphotransferase BF28_4985 IPR011009 Protein kinase-like domain superfamily BF28_4987 IPR004995 Bacillus/Clostridium Ger spore germination protein BF28_499 IPR002059 Cold-shock protein, DNA-binding BF28_499 IPR012156 Cold shock, CspA BF28_499 IPR011129 Cold shock domain BF28_499 IPR019844 Cold-shock (CSD) domain BF28_499 IPR012340 Nucleic acid-binding, OB-fold BF28_4990 IPR006047 Glycosyl hydrolase, family 13, catalytic domain BF28_4990 IPR013780 Glycosyl hydrolase, all-beta BF28_4990 IPR012769 Trehalose-6-phosphate hydrolase BF28_4990 IPR032091 Maltogenic Amylase, C-terminal BF28_4990 IPR017853 Glycoside hydrolase superfamily BF28_4991 IPR036878 Glucose permease domain IIB BF28_4991 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site BF28_4991 IPR003352 Phosphotransferase system, EIIC BF28_4991 IPR013013 Phosphotransferase system, EIIC component, type 1 BF28_4991 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component BF28_4991 IPR011296 Phosphotransferase system, trehalose-specific IIBC component BF28_4991 IPR001996 Phosphotransferase system, IIB component, type 1 BF28_4992 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily BF28_4992 IPR036390 Winged helix DNA-binding domain superfamily BF28_4992 IPR011663 UbiC transcription regulator-associated BF28_4992 IPR012770 Trehalose operon transcriptional repressor BF28_4992 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_4992 IPR000524 Transcription regulator HTH, GntR BF28_4993 IPR002293 Amino acid/polyamine transporter I BF28_4994 IPR001633 EAL domain BF28_4994 IPR000160 GGDEF domain BF28_4994 IPR035919 EAL domain superfamily BF28_4994 IPR005330 MHYT domain BF28_4994 IPR029787 Nucleotide cyclase BF28_4997 IPR030874 Cardiolipin synthase, Firmicutes-type BF28_4997 IPR001736 Phospholipase D/Transphosphatidylase BF28_4997 IPR027379 Cardiolipin synthase N-terminal BF28_4997 IPR022924 Cardiolipin synthase BF28_4997 IPR025202 Phospholipase D-like domain BF28_4998 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_4998 IPR003593 AAA+ ATPase domain BF28_4998 IPR001270 ClpA/B family BF28_4998 IPR011704 ATPase, dynein-related, AAA domain BF28_4999 IPR036465 von Willebrand factor A-like domain superfamily BF28_4999 IPR002035 von Willebrand factor, type A BF28_50 IPR001854 Ribosomal protein L29/L35 BF28_50 IPR036049 Ribosomal protein L29/L35 superfamily BF28_50 IPR018254 Ribosomal protein L29, conserved site BF28_500 IPR032528 Sigma 54 modulation/S30EA ribosomal protein, C-terminal BF28_500 IPR036567 Ribosome hibernation promotion factor-like BF28_500 IPR038416 Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain superfamily BF28_500 IPR034694 Ribosome hibernation promoting factor, long/plastid BF28_500 IPR003489 Ribosome hibernation promoting factor/RaiA BF28_5000 IPR006357 HAD-superfamily hydrolase, subfamily IIA BF28_5000 IPR023214 HAD superfamily BF28_5000 IPR020476 NUDIX hydrolase BF28_5000 IPR020084 NUDIX hydrolase, conserved site BF28_5000 IPR036412 HAD-like superfamily BF28_5000 IPR015797 NUDIX hydrolase-like domain superfamily BF28_5000 IPR000086 NUDIX hydrolase domain BF28_5001 IPR004467 Orotate phosphoribosyl transferase domain BF28_5001 IPR023031 Orotate phosphoribosyltransferase BF28_5001 IPR000836 Phosphoribosyltransferase domain BF28_5001 IPR029057 Phosphoribosyltransferase-like BF28_5002 IPR036291 NAD(P)-binding domain superfamily BF28_5002 IPR001509 NAD-dependent epimerase/dehydratase BF28_5003 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site BF28_5003 IPR004839 Aminotransferase, class I/classII BF28_5003 IPR010962 Putative 8-amino-7-oxononanoate synthase, Archaea/Firmicutes type BF28_5003 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BF28_5003 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BF28_5003 IPR015424 Pyridoxal phosphate-dependent transferase BF28_5004 IPR013216 Methyltransferase type 11 BF28_5004 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BF28_5005 IPR017871 ABC transporter, conserved site BF28_5005 IPR003439 ABC transporter-like BF28_5005 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_5005 IPR003593 AAA+ ATPase domain BF28_5006 IPR000522 ABC transporter, permease protein, BtuC-like BF28_5006 IPR037294 ABC transporter, BtuC-like BF28_5007 IPR037294 ABC transporter, BtuC-like BF28_5007 IPR000522 ABC transporter, permease protein, BtuC-like BF28_5008 IPR002491 ABC transporter periplasmic binding domain BF28_5009 IPR005279 Dipeptide/tripeptide permease BF28_5009 IPR020846 Major facilitator superfamily domain BF28_5009 IPR000109 Proton-dependent oligopeptide transporter family BF28_5009 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site BF28_5009 IPR036259 MFS transporter superfamily BF28_501 IPR011115 SecA DEAD-like, N-terminal BF28_501 IPR020937 SecA conserved site BF28_501 IPR000185 Protein translocase subunit SecA BF28_501 IPR004027 SEC-C motif BF28_501 IPR036670 SecA, preprotein cross-linking domain superfamily BF28_501 IPR014018 SecA motor DEAD BF28_501 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_501 IPR036266 SecA, Wing/Scaffold superfamily BF28_501 IPR011130 SecA, preprotein cross-linking domain BF28_501 IPR011116 SecA Wing/Scaffold BF28_5010 IPR012610 Small acid-soluble spore protein, SspH BF28_5011 IPR011991 ArsR-like helix-turn-helix domain BF28_5011 IPR001845 HTH ArsR-type DNA-binding domain BF28_5011 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_5011 IPR036390 Winged helix DNA-binding domain superfamily BF28_5012 IPR003804 L-lactate permease BF28_5013 IPR022761 Fumarate lyase, N-terminal BF28_5013 IPR000362 Fumarate lyase family BF28_5013 IPR020557 Fumarate lyase, conserved site BF28_5013 IPR008948 L-Aspartase-like BF28_5013 IPR018951 Fumarase C, C-terminal BF28_5013 IPR024083 Fumarase/histidase, N-terminal BF28_5013 IPR004708 Aspartate ammonia-lyase BF28_5014 IPR000644 CBS domain BF28_5014 IPR002550 CNNM, transmembrane domain BF28_5014 IPR005170 Transporter-associated domain BF28_5014 IPR016169 FAD-binding, type PCMH, subdomain 2 BF28_5014 IPR036318 FAD-binding, type PCMH-like superfamily BF28_5015 IPR037478 YwkD-like domain BF28_5015 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain BF28_5015 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BF28_5015 IPR037523 Vicinal oxygen chelate (VOC) domain BF28_5016 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial BF28_5016 IPR008276 Concentrative nucleoside transporter BF28_5016 IPR002668 Concentrative nucleoside transporter N-terminal domain BF28_5016 IPR011657 Concentrative nucleoside transporter C-terminal domain BF28_5017 IPR004474 Cell envelope-related transcriptional attenuator domain BF28_5018 IPR007391 Vancomycin resistance VanW BF28_502 IPR000352 Peptide chain release factor class I BF28_502 IPR005139 Peptide chain release factor BF28_502 IPR004374 Peptide chain release factor 2 BF28_5022 IPR011096 FTP domain BF28_5022 IPR013856 Peptidase M4 domain BF28_5022 IPR001570 Peptidase M4, C-terminal BF28_5022 IPR027268 Peptidase M4/M1, CTD superfamily BF28_5022 IPR023612 Peptidase M4 BF28_5022 IPR025711 PepSY domain BF28_5025 IPR041525 Nicotinate/nicotinamide phosphoribosyltransferase BF28_5025 IPR041619 Nicotinate phosphoribosyltransferase C-terminal domain BF28_5025 IPR040727 Nicotinate phosphoribosyltransferase, N-terminal domain BF28_5025 IPR007229 Nicotinate phosphoribosyltransferase family BF28_5025 IPR006405 Nicotinate phosphoribosyltransferase pncB-type BF28_5025 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal BF28_5025 IPR013785 Aldolase-type TIM barrel BF28_5026 IPR023299 P-type ATPase, cytoplasmic domain N BF28_5026 IPR018303 P-type ATPase, phosphorylation site BF28_5026 IPR027256 P-type ATPase, subfamily IB BF28_5026 IPR036163 Heavy metal-associated domain superfamily BF28_5026 IPR036412 HAD-like superfamily BF28_5026 IPR008250 P-type ATPase, A domain superfamily BF28_5026 IPR001757 P-type ATPase BF28_5026 IPR023298 P-type ATPase, transmembrane domain superfamily BF28_5026 IPR023214 HAD superfamily BF28_5026 IPR017969 Heavy-metal-associated, conserved site BF28_5026 IPR006121 Heavy metal-associated domain, HMA BF28_5027 IPR036390 Winged helix DNA-binding domain superfamily BF28_5027 IPR011991 ArsR-like helix-turn-helix domain BF28_5027 IPR018334 ArsR-type transcription regulator, HTH motif BF28_5027 IPR001845 HTH ArsR-type DNA-binding domain BF28_5027 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_5028 IPR002293 Amino acid/polyamine transporter I BF28_5029 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain BF28_5029 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal BF28_5029 IPR036291 NAD(P)-binding domain superfamily BF28_5029 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 BF28_5029 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 BF28_5029 IPR008141 Alanine dehydrogenase BF28_503 IPR012218 Cytochrome c, Bacillus subtilis c550-related BF28_503 IPR036909 Cytochrome c-like domain superfamily BF28_503 IPR009056 Cytochrome c-like domain BF28_5031 IPR012440 Protein of unknown function DUF1641 BF28_5032 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain BF28_5032 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain BF28_5032 IPR006656 Molybdopterin oxidoreductase BF28_5032 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding BF28_5032 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BF28_5032 IPR009010 Aspartate decarboxylase-like domain superfamily BF28_5032 IPR041924 Formate dehydrogenase H, N-terminal BF28_5032 IPR006478 Formate dehydrogenase, alpha subunit BF28_5032 IPR006657 Molybdopterin dinucleotide-binding domain BF28_5032 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BF28_5032 IPR036010 2Fe-2S ferredoxin-like superfamily BF28_5033 IPR016193 Cytidine deaminase-like BF28_5033 IPR003786 Sulfur carrier protein FdhD BF28_5034 IPR016181 Acyl-CoA N-acyltransferase BF28_5034 IPR000182 GNAT domain BF28_5034 IPR017813 Mycothiol acetyltransferase BF28_5036 IPR001867 OmpR/PhoB-type DNA-binding domain BF28_5036 IPR016032 Signal transduction response regulator, C-terminal effector BF28_5036 IPR001789 Signal transduction response regulator, receiver domain BF28_5036 IPR039420 Transcriptional regulatory protein WalR-like BF28_5036 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_5036 IPR011006 CheY-like superfamily BF28_5037 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BF28_5037 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BF28_5037 IPR005467 Histidine kinase domain BF28_5037 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BF28_5037 IPR013767 PAS fold BF28_5037 IPR003594 Histidine kinase/HSP90-like ATPase BF28_5037 IPR003660 HAMP domain BF28_5037 IPR035965 PAS domain superfamily BF28_5037 IPR041328 ResE, histidine kinase sensor domain BF28_5037 IPR000014 PAS domain BF28_5037 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BF28_5039 IPR015424 Pyridoxal phosphate-dependent transferase BF28_5039 IPR004839 Aminotransferase, class I/classII BF28_5039 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BF28_5039 IPR000524 Transcription regulator HTH, GntR BF28_5039 IPR036390 Winged helix DNA-binding domain superfamily BF28_5039 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_504 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_504 IPR005286 Cell division protein FtsE, ATP-binding BF28_504 IPR003593 AAA+ ATPase domain BF28_504 IPR003439 ABC transporter-like BF28_504 IPR017871 ABC transporter, conserved site BF28_5040 IPR000620 EamA domain BF28_5042 IPR015884 Malic enzyme, conserved site BF28_5042 IPR037062 Malic enzyme, N-terminal domain superfamily BF28_5042 IPR012301 Malic enzyme, N-terminal domain BF28_5042 IPR001891 Malic oxidoreductase BF28_5042 IPR012302 Malic enzyme, NAD-binding BF28_5042 IPR036291 NAD(P)-binding domain superfamily BF28_5043 IPR004679 2-hydroxycarboxylate transporter BF28_5043 IPR018025 2-hydroxycarboxylate transporter, Proteobacteria/Firmicutes BF28_5044 IPR024187 Signal transduction response regulator, citrate/malate metabolism BF28_5044 IPR001789 Signal transduction response regulator, receiver domain BF28_5044 IPR011006 CheY-like superfamily BF28_5045 IPR003594 Histidine kinase/HSP90-like ATPase BF28_5045 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BF28_5045 IPR005467 Histidine kinase domain BF28_5045 IPR000014 PAS domain BF28_5045 IPR013767 PAS fold BF28_5045 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BF28_5045 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB BF28_5045 IPR029151 Periplasmic sensor-like domain superfamily BF28_5045 IPR033463 Single cache domain 3 BF28_5045 IPR039506 SpoOB, alpha-helical domain BF28_5046 IPR029151 Periplasmic sensor-like domain superfamily BF28_5046 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain BF28_5046 IPR003660 HAMP domain BF28_5046 IPR033479 Double Cache domain 1 BF28_5047 IPR039563 Peptidase C39 single domain protein BF28_5047 IPR039564 Peptidase C39-like BF28_5047 IPR016997 Uncharacterised conserved protein UCP032442 BF28_5049 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BF28_5049 IPR005467 Histidine kinase domain BF28_5049 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BF28_5049 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BF28_5049 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BF28_5049 IPR003594 Histidine kinase/HSP90-like ATPase BF28_505 IPR003838 ABC transporter permease protein domain BF28_505 IPR004513 Cell division protein FtsX BF28_505 IPR040690 FtsX, extracellular domain BF28_5050 IPR001789 Signal transduction response regulator, receiver domain BF28_5050 IPR001867 OmpR/PhoB-type DNA-binding domain BF28_5050 IPR011006 CheY-like superfamily BF28_5050 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_5050 IPR039420 Transcriptional regulatory protein WalR-like BF28_5051 IPR029052 Metallo-dependent phosphatase-like BF28_5051 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type BF28_5051 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) BF28_5052 IPR006061 Solute-binding family 1, conserved site BF28_5052 IPR006059 Bacterial extracellular solute-binding protein BF28_5053 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BF28_5053 IPR030165 sn-Glycerol-3-phosphate transport system permease protein UgpE BF28_5053 IPR035906 MetI-like superfamily BF28_5054 IPR035906 MetI-like superfamily BF28_5054 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BF28_5055 IPR017922 sn-Glycerol-3-phosphate import ATP-binding protein UgpC BF28_5055 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_5055 IPR040582 MalK, OB fold domain BF28_5055 IPR003439 ABC transporter-like BF28_5055 IPR017871 ABC transporter, conserved site BF28_5055 IPR003593 AAA+ ATPase domain BF28_5055 IPR008995 Molybdate/tungstate binding, C-terminal BF28_5056 IPR035928 GlpP-like superfamily BF28_5056 IPR006699 Glycerol uptake operon antiterminator BF28_506 IPR005151 Tail specific protease BF28_506 IPR036365 PGBD-like superfamily BF28_506 IPR036366 PGBD superfamily BF28_506 IPR004447 C-terminal-processing peptidase S41A BF28_506 IPR029045 ClpP/crotonase-like domain superfamily BF28_506 IPR002477 Peptidoglycan binding-like BF28_506 IPR001478 PDZ domain BF28_506 IPR036034 PDZ superfamily BF28_506 IPR041489 PDZ domain 6 BF28_5061 IPR014738 Citrate transporter BF28_5061 IPR004680 Citrate transporter-like domain BF28_5063 IPR028141 Transcriptional regulator BF28_5063 IPR001789 Signal transduction response regulator, receiver domain BF28_5063 IPR024187 Signal transduction response regulator, citrate/malate metabolism BF28_5063 IPR011006 CheY-like superfamily BF28_5064 IPR000014 PAS domain BF28_5064 IPR035965 PAS domain superfamily BF28_5064 IPR003594 Histidine kinase/HSP90-like ATPase BF28_5064 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB BF28_5064 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BF28_5064 IPR033463 Single cache domain 3 BF28_5064 IPR029151 Periplasmic sensor-like domain superfamily BF28_5064 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BF28_5064 IPR005467 Histidine kinase domain BF28_5064 IPR013767 PAS fold BF28_5064 IPR039506 SpoOB, alpha-helical domain BF28_5065 IPR029151 Periplasmic sensor-like domain superfamily BF28_5065 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain BF28_5065 IPR033479 Double Cache domain 1 BF28_5065 IPR003660 HAMP domain BF28_5066 IPR001107 Band 7 domain BF28_5066 IPR036013 Band 7/SPFH domain superfamily BF28_5066 IPR031905 Flotillin, C-terminal domain BF28_5066 IPR027705 Flotillin family BF28_5068 IPR022409 PKD/Chitinase domain BF28_5068 IPR002169 Peptidase M9A/M9B, collagenase, bacterial BF28_5068 IPR013661 Peptidase M9, collagenase, N-terminal domain BF28_5068 IPR013783 Immunoglobulin-like fold BF28_5068 IPR041379 Collagenase ColG, catalytic helper subdomain BF28_5068 IPR000601 PKD domain BF28_5068 IPR035986 PKD domain superfamily BF28_5069 IPR018093 BCCT transporter, conserved site BF28_5069 IPR000060 BCCT transporter family BF28_507 IPR001478 PDZ domain BF28_507 IPR036034 PDZ superfamily BF28_507 IPR041489 PDZ domain 6 BF28_5070 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BF28_5070 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain BF28_5070 IPR035906 MetI-like superfamily BF28_5071 IPR035906 MetI-like superfamily BF28_5071 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BF28_5071 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain BF28_5072 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_5072 IPR003593 AAA+ ATPase domain BF28_5072 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type BF28_5072 IPR017871 ABC transporter, conserved site BF28_5072 IPR003439 ABC transporter-like BF28_5073 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BF28_5073 IPR018313 Solute-binding protein family 3, conserved site BF28_5073 IPR001320 Ionotropic glutamate receptor BF28_5077 IPR006698 Uncharacterised protein family UPF0229 BF28_5077 IPR014230 Sporulation protein YhbH BF28_5078 IPR016230 Serine-protein kinase, PrkA BF28_5078 IPR010650 PrkA C-terminal domain BF28_5078 IPR013153 PrkA AAA domain BF28_5078 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_508 IPR003439 ABC transporter-like BF28_508 IPR036640 ABC transporter type 1, transmembrane domain superfamily BF28_508 IPR011527 ABC transporter type 1, transmembrane domain BF28_508 IPR003593 AAA+ ATPase domain BF28_508 IPR039421 Type I protein exporter BF28_508 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_508 IPR017871 ABC transporter, conserved site BF28_5080 IPR029787 Nucleotide cyclase BF28_5080 IPR035919 EAL domain superfamily BF28_5080 IPR005330 MHYT domain BF28_5080 IPR001633 EAL domain BF28_5080 IPR000160 GGDEF domain BF28_5081 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal BF28_5081 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase BF28_5081 IPR001537 tRNA/rRNA methyltransferase, SpoU type BF28_5081 IPR029028 Alpha/beta knot methyltransferases BF28_5082 IPR024301 Putative amidase domain BF28_5083 IPR013542 Domain of unknown function DUF1730 BF28_5083 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BF28_5083 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BF28_5083 IPR004155 PBS lyase HEAT-like repeat BF28_5083 IPR016024 Armadillo-type fold BF28_5083 IPR004453 Epoxyqueuosine reductase QueG BF28_5083 IPR011989 Armadillo-like helical BF28_5085 IPR012336 Thioredoxin-like fold BF28_5085 IPR036249 Thioredoxin-like superfamily BF28_5086 IPR001460 Penicillin-binding protein, transpeptidase BF28_5086 IPR036950 Penicillin binding protein transglycosylase domain BF28_5086 IPR023346 Lysozyme-like domain superfamily BF28_5086 IPR001264 Glycosyl transferase, family 51 BF28_5086 IPR012338 Beta-lactamase/transpeptidase-like BF28_5087 IPR006357 HAD-superfamily hydrolase, subfamily IIA BF28_5087 IPR000086 NUDIX hydrolase domain BF28_5087 IPR020084 NUDIX hydrolase, conserved site BF28_5087 IPR015797 NUDIX hydrolase-like domain superfamily BF28_5087 IPR020476 NUDIX hydrolase BF28_5087 IPR023214 HAD superfamily BF28_5087 IPR036412 HAD-like superfamily BF28_5088 IPR029072 YebC-like BF28_5088 IPR026562 Probable transcriptional regulatory protein YeeN BF28_5088 IPR026564 Transcriptional regulator TACO1-like, domain 3 BF28_5088 IPR002876 Transcriptional regulator TACO1-like BF28_5088 IPR017856 Integrase-like, N-terminal BF28_509 IPR035439 UPF0145 domain superfamily BF28_509 IPR002765 Uncharacterised protein family UPF0145 BF28_51 IPR036920 Ribosomal protein L10e/L16 superfamily BF28_51 IPR000114 Ribosomal protein L16 BF28_51 IPR020798 Ribosomal protein L16, conserved site BF28_51 IPR016180 Ribosomal protein L10e/L16 BF28_5109 IPR020912 Uncharacterised protein family UPF0295 BF28_511 IPR005025 NADPH-dependent FMN reductase-like BF28_511 IPR029039 Flavoprotein-like superfamily BF28_5110 IPR036390 Winged helix DNA-binding domain superfamily BF28_5110 IPR002481 Ferric-uptake regulator BF28_5110 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_5111 IPR036249 Thioredoxin-like superfamily BF28_5111 IPR024706 Peroxiredoxin, AhpC-type BF28_5111 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant BF28_5111 IPR013766 Thioredoxin domain BF28_5112 IPR013099 Potassium channel domain BF28_5115 IPR003593 AAA+ ATPase domain BF28_5115 IPR017871 ABC transporter, conserved site BF28_5115 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_5115 IPR003439 ABC transporter-like BF28_5116 IPR015424 Pyridoxal phosphate-dependent transferase BF28_5116 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BF28_5116 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BF28_5116 IPR005814 Aminotransferase class-III BF28_5116 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase BF28_5117 IPR017932 Glutamine amidotransferase type 2 domain BF28_5117 IPR002489 Glutamate synthase, alpha subunit, C-terminal BF28_5117 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily BF28_5117 IPR029055 Nucleophile aminohydrolases, N-terminal BF28_5117 IPR002932 Glutamate synthase domain BF28_5117 IPR006982 Glutamate synthase, central-N BF28_5117 IPR013785 Aldolase-type TIM barrel BF28_5118 IPR010343 Aromatic acid exporter family member 1 BF28_5119 IPR003593 AAA+ ATPase domain BF28_5119 IPR011527 ABC transporter type 1, transmembrane domain BF28_5119 IPR036640 ABC transporter type 1, transmembrane domain superfamily BF28_5119 IPR003439 ABC transporter-like BF28_5119 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_5119 IPR017871 ABC transporter, conserved site BF28_5119 IPR039421 Type I protein exporter BF28_512 IPR011789 Cu(I)-responsive transcriptional regulator BF28_512 IPR009061 Putative DNA-binding domain superfamily BF28_512 IPR000551 MerR-type HTH domain BF28_512 IPR015358 Transcription regulator MerR, DNA binding BF28_5120 IPR035930 FomD-like superfamily BF28_5120 IPR007295 Domain of unknown function DUF402 BF28_5120 IPR016882 Uncharacterised protein family UPF0374 BF28_5121 IPR025572 YgaB-like protein BF28_5122 IPR006341 Acid-soluble spore protein, gamma-type BF28_5124 IPR003265 HhH-GPD domain BF28_5124 IPR015797 NUDIX hydrolase-like domain superfamily BF28_5124 IPR029119 MutY, C-terminal BF28_5124 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal BF28_5124 IPR011257 DNA glycosylase BF28_5124 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif BF28_5124 IPR005760 A/G-specific adenine glycosylase MutY BF28_5125 IPR007404 LexA-binding, inner membrane-associated putative hydrolase BF28_5126 IPR026952 WVELL protein BF28_5127 IPR012611 Small acid-soluble spore protein, SspK BF28_513 IPR036390 Winged helix DNA-binding domain superfamily BF28_513 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_513 IPR000847 Transcription regulator HTH, LysR BF28_513 IPR005119 LysR, substrate-binding BF28_5130 IPR003783 Regulatory protein RecX BF28_5130 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_5131 IPR036291 NAD(P)-binding domain superfamily BF28_5131 IPR001509 NAD-dependent epimerase/dehydratase BF28_5131 IPR013549 Domain of unknown function DUF1731 BF28_5131 IPR010099 Epimerase family protein SDR39U1 BF28_5132 IPR032466 Metal-dependent hydrolase BF28_5132 IPR011059 Metal-dependent hydrolase, composite domain superfamily BF28_5132 IPR005920 Imidazolonepropionase BF28_5132 IPR006680 Amidohydrolase-related BF28_5135 IPR009695 Diacylglycerol glucosyltransferase, N-terminal BF28_5135 IPR007235 Glycosyl transferase, family 28, C-terminal BF28_5135 IPR023589 Processive diacylglycerol beta-glucosyltransferase BF28_5136 IPR001989 Radical-activating enzyme, conserved site BF28_5136 IPR007197 Radical SAM BF28_5136 IPR012839 Organic radical enzyme activase BF28_5136 IPR012838 Pyruvate formate-lyase 1 activating enzyme BF28_5136 IPR034465 Pyruvate formate-lyase activase BF28_5136 IPR034457 Organic radical-activating enzymes BF28_5136 IPR013785 Aldolase-type TIM barrel BF28_5137 IPR005949 Formate acetyltransferase BF28_5137 IPR001150 Glycine radical domain BF28_5137 IPR004184 Pyruvate formate lyase domain BF28_5137 IPR019777 Formate C-acetyltransferase glycine radical, conserved site BF28_5138 IPR001173 Glycosyltransferase 2-like BF28_5138 IPR029044 Nucleotide-diphospho-sugar transferases BF28_5139 IPR002376 Formyl transferase, N-terminal BF28_5139 IPR036291 NAD(P)-binding domain superfamily BF28_5139 IPR005793 Formyl transferase, C-terminal BF28_5139 IPR011034 Formyl transferase-like, C-terminal domain superfamily BF28_5139 IPR036477 Formyl transferase, N-terminal domain superfamily BF28_5139 IPR001509 NAD-dependent epimerase/dehydratase BF28_5139 IPR021168 Bifunctional polymyxin resistance protein, ArnA BF28_514 IPR018383 Uncharacterised protein family UPF0324, prokaryote BF28_5140 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase BF28_5140 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation BF28_5140 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily BF28_5140 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal BF28_5140 IPR017476 UDP-glucose/GDP-mannose dehydrogenase BF28_5140 IPR036291 NAD(P)-binding domain superfamily BF28_5140 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily BF28_5140 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal BF28_5141 IPR022857 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase BF28_5141 IPR001173 Glycosyltransferase 2-like BF28_5141 IPR029044 Nucleotide-diphospho-sugar transferases BF28_5145 IPR012338 Beta-lactamase/transpeptidase-like BF28_5145 IPR001466 Beta-lactamase-related BF28_5146 IPR001996 Phosphotransferase system, IIB component, type 1 BF28_5146 IPR003352 Phosphotransferase system, EIIC BF28_5146 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site BF28_5146 IPR036878 Glucose permease domain IIB BF28_5146 IPR013013 Phosphotransferase system, EIIC component, type 1 BF28_5146 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component BF28_5147 IPR012338 Beta-lactamase/transpeptidase-like BF28_5147 IPR015868 Glutaminase BF28_5152 IPR002933 Peptidase M20 BF28_5152 IPR010182 N-formyl-4-amino-5-aminomethyl-2-methylpyrimidine deformylase/Succinyl-diaminopimelate desuccinylase BF28_5152 IPR036264 Bacterial exopeptidase dimerisation domain BF28_5152 IPR011650 Peptidase M20, dimerisation domain BF28_5153 IPR004840 Amino acid permease, conserved site BF28_5153 IPR004841 Amino acid permease/ SLC12A domain BF28_5155 IPR003593 AAA+ ATPase domain BF28_5155 IPR009057 Homeobox-like domain superfamily BF28_5155 IPR002197 DNA binding HTH domain, Fis-type BF28_5155 IPR025944 Sigma-54 interaction domain, conserved site BF28_5155 IPR002078 RNA polymerase sigma factor 54 interaction domain BF28_5155 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_5155 IPR000014 PAS domain BF28_5155 IPR035965 PAS domain superfamily BF28_5155 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 BF28_5155 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 BF28_5157 IPR020103 Pseudouridine synthase, catalytic domain superfamily BF28_5157 IPR001406 Pseudouridine synthase I, TruA BF28_5157 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain BF28_5157 IPR020095 Pseudouridine synthase I, TruA, C-terminal BF28_5158 IPR002792 TRAM domain BF28_5158 IPR010280 (Uracil-5)-methyltransferase family BF28_5158 IPR030390 RNA methyltransferase TrmA, active site BF28_5158 IPR030391 RNA methyltransferase TrmA, conserved site BF28_5158 IPR012340 Nucleic acid-binding, OB-fold BF28_5158 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BF28_5159 IPR011257 DNA glycosylase BF28_5159 IPR003265 HhH-GPD domain BF28_5160 IPR014235 Peptidoglycan-N-acetylmuramic acid deacetylase PdaA BF28_5160 IPR002509 NodB homology domain BF28_5160 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel BF28_5161 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain BF28_5161 IPR011167 Iron-dependent fumarate hydratase BF28_5161 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily BF28_5161 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain BF28_5163 IPR007197 Radical SAM BF28_5163 IPR031004 Radical SAM/CxCxxxxC motif protein YfkAB BF28_5163 IPR014866 YfkB-like domain BF28_5163 IPR013785 Aldolase-type TIM barrel BF28_5164 IPR025548 YfkD-like protein BF28_5165 IPR004713 Calcium/proton exchanger BF28_5165 IPR004798 Calcium/proton exchanger CAX BF28_5165 IPR004837 Sodium/calcium exchanger membrane region BF28_5166 IPR012349 FMN-binding split barrel BF28_5166 IPR038725 General stress protein, FMN-binding split barrel domain BF28_5169 IPR032816 SNARE associated Golgi protein BF28_5171 IPR036286 LexA/Signal peptidase-like superfamily BF28_5171 IPR019757 Peptidase S26A, signal peptidase I, lysine active site BF28_5171 IPR019756 Peptidase S26A, signal peptidase I, serine active site BF28_5171 IPR019533 Peptidase S26 BF28_5171 IPR019758 Peptidase S26A, signal peptidase I, conserved site BF28_5171 IPR000223 Peptidase S26A, signal peptidase I BF28_5173 IPR000620 EamA domain BF28_5174 IPR027256 P-type ATPase, subfamily IB BF28_5174 IPR036412 HAD-like superfamily BF28_5174 IPR008250 P-type ATPase, A domain superfamily BF28_5174 IPR023298 P-type ATPase, transmembrane domain superfamily BF28_5174 IPR018303 P-type ATPase, phosphorylation site BF28_5174 IPR023299 P-type ATPase, cytoplasmic domain N BF28_5174 IPR023214 HAD superfamily BF28_5174 IPR001757 P-type ATPase BF28_5175 IPR017039 Virulence factor BrkB BF28_5177 IPR023485 Phosphotyrosine protein phosphatase I BF28_5177 IPR036196 Phosphotyrosine protein phosphatase I superfamily BF28_5177 IPR017867 Protein-tyrosine phosphatase, low molecular weight BF28_5178 IPR009507 Protein of unknown function UPF0435 BF28_5179 IPR001757 P-type ATPase BF28_5179 IPR036412 HAD-like superfamily BF28_5179 IPR008250 P-type ATPase, A domain superfamily BF28_5179 IPR023298 P-type ATPase, transmembrane domain superfamily BF28_5179 IPR018303 P-type ATPase, phosphorylation site BF28_5179 IPR023299 P-type ATPase, cytoplasmic domain N BF28_5179 IPR004014 Cation-transporting P-type ATPase, N-terminal BF28_5179 IPR006068 Cation-transporting P-type ATPase, C-terminal BF28_5179 IPR023214 HAD superfamily BF28_5180 IPR008863 Toxic anion resistance BF28_5181 IPR025647 Putative component of 'biosynthetic module' BF28_5182 IPR022493 Integral membrane YkoY BF28_5182 IPR005496 Integral membrane protein TerC BF28_5183 IPR003325 TerD domain BF28_5184 IPR003325 TerD domain BF28_5185 IPR003325 TerD domain BF28_5186 IPR000600 ROK family BF28_5188 IPR002316 Proline-tRNA ligase, class IIa BF28_5188 IPR004154 Anticodon-binding BF28_5188 IPR004499 Proline-tRNA ligase, class IIa, archaeal-type BF28_5188 IPR036621 Anticodon-binding domain superfamily BF28_5188 IPR016061 Proline-tRNA ligase, class II, C-terminal BF28_5188 IPR017449 Prolyl-tRNA synthetase, class II BF28_5188 IPR033721 Prolyl-tRNA synthetase, catalytic domain BF28_5188 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) BF28_5188 IPR006195 Aminoacyl-tRNA synthetase, class II BF28_5191 IPR036259 MFS transporter superfamily BF28_5191 IPR020846 Major facilitator superfamily domain BF28_5191 IPR024671 Autophagy-related protein 22-like BF28_5195 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily BF28_5195 IPR023772 DNA-binding HTH domain, TetR-type, conserved site BF28_5195 IPR009057 Homeobox-like domain superfamily BF28_5195 IPR001647 DNA-binding HTH domain, TetR-type BF28_5195 IPR013571 Transcription regulator QacR, C-terminal BF28_5199 IPR003961 Fibronectin type III BF28_5199 IPR029070 Chitinase insertion domain superfamily BF28_5199 IPR013783 Immunoglobulin-like fold BF28_5199 IPR011583 Chitinase II BF28_5199 IPR036573 Carbohydrate-binding module superfamily 5/12 BF28_5199 IPR003610 Carbohydrate-binding module family 5/12 BF28_5199 IPR001579 Glycoside hydrolase, chitinase active site BF28_5199 IPR017853 Glycoside hydrolase superfamily BF28_5199 IPR001223 Glycoside hydrolase family 18, catalytic domain BF28_5199 IPR036116 Fibronectin type III superfamily BF28_52 IPR009019 K homology domain superfamily, prokaryotic type BF28_52 IPR001351 Ribosomal protein S3, C-terminal BF28_52 IPR018280 Ribosomal protein S3, conserved site BF28_52 IPR036419 Ribosomal protein S3, C-terminal domain superfamily BF28_52 IPR005704 Ribosomal protein S3, bacterial-type BF28_52 IPR015946 K homology domain-like, alpha/beta BF28_52 IPR004087 K Homology domain BF28_52 IPR004044 K Homology domain, type 2 BF28_520 IPR000551 MerR-type HTH domain BF28_520 IPR009061 Putative DNA-binding domain superfamily BF28_520 IPR012925 TipAS antibiotic-recognition domain BF28_520 IPR036244 TipA-like multidrug resistance regulator, antibiotic-recognition domain BF28_5200 IPR017871 ABC transporter, conserved site BF28_5200 IPR003593 AAA+ ATPase domain BF28_5200 IPR003439 ABC transporter-like BF28_5200 IPR032781 ABC-transporter extension domain BF28_5200 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_5202 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_5202 IPR017871 ABC transporter, conserved site BF28_5202 IPR003439 ABC transporter-like BF28_5202 IPR003593 AAA+ ATPase domain BF28_5204 IPR035906 MetI-like superfamily BF28_5204 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BF28_5205 IPR029756 MTH1187/YkoF-like BF28_5205 IPR002767 Thiamine-binding protein BF28_5206 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain BF28_5206 IPR004090 Chemotaxis methyl-accepting receptor BF28_5206 IPR003660 HAMP domain BF28_5207 IPR004668 Anaerobic c4-dicarboxylate membrane transporter BF28_5209 IPR022998 Thiamine phosphate synthase/TenI BF28_5209 IPR036206 Thiamin phosphate synthase superfamily BF28_5209 IPR013785 Aldolase-type TIM barrel BF28_5209 IPR034291 Thiamine phosphate synthase BF28_5210 IPR000417 Hydroxyethylthiazole kinase BF28_5210 IPR029056 Ribokinase-like BF28_5211 IPR013497 DNA topoisomerase, type IA, central BF28_5211 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 BF28_5211 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 BF28_5211 IPR003601 DNA topoisomerase, type IA, domain 2 BF28_5211 IPR000380 DNA topoisomerase, type IA BF28_5211 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 BF28_5211 IPR023405 DNA topoisomerase, type IA, core domain BF28_5211 IPR003602 DNA topoisomerase, type IA, DNA-binding domain BF28_5211 IPR005738 DNA topoisomerase III BF28_5211 IPR006171 TOPRIM domain BF28_5211 IPR034144 DNA topoisomerase 3-like, TOPRIM domain BF28_5211 IPR023406 DNA topoisomerase, type IA, active site BF28_5212 IPR013525 ABC-2 type transporter BF28_5212 IPR017501 Phage infection protein, YhgE, C-terminal BF28_5212 IPR017500 Phage infection protein, YhgE, N-terminal BF28_5213 IPR036691 Endonuclease/exonuclease/phosphatase superfamily BF28_5213 IPR005135 Endonuclease/exonuclease/phosphatase BF28_5214 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site BF28_5214 IPR011300 Phosphotransferase system, IIBC component BF28_5214 IPR001996 Phosphotransferase system, IIB component, type 1 BF28_5214 IPR013013 Phosphotransferase system, EIIC component, type 1 BF28_5214 IPR011055 Duplicated hybrid motif BF28_5214 IPR003352 Phosphotransferase system, EIIC BF28_5214 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 BF28_5214 IPR036878 Glucose permease domain IIB BF28_5215 IPR017853 Glycoside hydrolase superfamily BF28_5215 IPR032091 Maltogenic Amylase, C-terminal BF28_5215 IPR006047 Glycosyl hydrolase, family 13, catalytic domain BF28_5215 IPR013780 Glycosyl hydrolase, all-beta BF28_5216 IPR029151 Periplasmic sensor-like domain superfamily BF28_5216 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain BF28_5216 IPR003660 HAMP domain BF28_5216 IPR033479 Double Cache domain 1 BF28_5217 IPR004090 Chemotaxis methyl-accepting receptor BF28_5217 IPR003660 HAMP domain BF28_5217 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain BF28_5217 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain BF28_5218 IPR003593 AAA+ ATPase domain BF28_5218 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_5218 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type BF28_5218 IPR003439 ABC transporter-like BF28_5218 IPR017871 ABC transporter, conserved site BF28_5219 IPR018313 Solute-binding protein family 3, conserved site BF28_5219 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BF28_522 IPR001650 Helicase, C-terminal BF28_522 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_522 IPR014001 Helicase superfamily 1/2, ATP-binding domain BF28_522 IPR001943 UVR domain BF28_522 IPR006935 Helicase/UvrB, N-terminal BF28_522 IPR024759 UvrB, YAD/RRR-motif-containing domain BF28_522 IPR041471 UvrB, interaction domain BF28_522 IPR004807 UvrABC system, subunit B BF28_522 IPR036876 UVR domain superfamily BF28_5220 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain BF28_5220 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BF28_5220 IPR035906 MetI-like superfamily BF28_5222 IPR006076 FAD dependent oxidoreductase BF28_5222 IPR038010 YhfW, C-terminal Rieske domain BF28_5222 IPR005805 Rieske iron-sulphur protein, C-terminal BF28_5222 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily BF28_5222 IPR036188 FAD/NAD(P)-binding domain superfamily BF28_5222 IPR017941 Rieske [2Fe-2S] iron-sulphur domain BF28_5223 IPR020846 Major facilitator superfamily domain BF28_5223 IPR036259 MFS transporter superfamily BF28_5223 IPR004746 Major facilitator superfamily, aromatic acid:H+ symporter family BF28_5223 IPR005829 Sugar transporter, conserved site BF28_5223 IPR011701 Major facilitator superfamily BF28_5224 IPR018775 RNA repair pathway DNA polymerase beta BF28_5229 IPR035965 PAS domain superfamily BF28_5229 IPR013767 PAS fold BF28_5229 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BF28_5229 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BF28_5229 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BF28_5229 IPR005467 Histidine kinase domain BF28_5229 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BF28_5229 IPR003594 Histidine kinase/HSP90-like ATPase BF28_5229 IPR000014 PAS domain BF28_523 IPR003593 AAA+ ATPase domain BF28_523 IPR003439 ABC transporter-like BF28_523 IPR017871 ABC transporter, conserved site BF28_523 IPR004602 UvrABC system subunit A BF28_523 IPR041552 UvrA DNA-binding domain BF28_523 IPR041102 UvrA, interaction domain BF28_523 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_5235 IPR041657 Helix-turn-helix domain, group 17 BF28_5235 IPR010093 SinI-like, DNA-binding domain BF28_5237 IPR036188 FAD/NAD(P)-binding domain superfamily BF28_5237 IPR023753 FAD/NAD(P)-binding domain BF28_5237 IPR022890 Ferredoxin--NADP reductase, type 2 BF28_5238 IPR002491 ABC transporter periplasmic binding domain BF28_5239 IPR000522 ABC transporter, permease protein, BtuC-like BF28_5239 IPR037294 ABC transporter, BtuC-like BF28_5240 IPR000522 ABC transporter, permease protein, BtuC-like BF28_5240 IPR037294 ABC transporter, BtuC-like BF28_5241 IPR004782 L-fucose phosphate aldolase BF28_5241 IPR036409 Class II aldolase/adducin N-terminal domain superfamily BF28_5241 IPR001303 Class II aldolase/adducin N-terminal BF28_5243 IPR002575 Aminoglycoside phosphotransferase BF28_5243 IPR011009 Protein kinase-like domain superfamily BF28_5243 IPR009212 Methylthioribose kinase BF28_5244 IPR013766 Thioredoxin domain BF28_5244 IPR017559 Alkyl hydroperoxide reductase subunit C BF28_5244 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant BF28_5244 IPR024706 Peroxiredoxin, AhpC-type BF28_5244 IPR036249 Thioredoxin-like superfamily BF28_5245 IPR036249 Thioredoxin-like superfamily BF28_5245 IPR002109 Glutaredoxin BF28_5245 IPR012081 Alkyl hydroperoxide reductase subunit F BF28_5245 IPR036188 FAD/NAD(P)-binding domain superfamily BF28_5245 IPR012336 Thioredoxin-like fold BF28_5245 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site BF28_5245 IPR023753 FAD/NAD(P)-binding domain BF28_5247 IPR011650 Peptidase M20, dimerisation domain BF28_5247 IPR002933 Peptidase M20 BF28_5247 IPR036264 Bacterial exopeptidase dimerisation domain BF28_5247 IPR017439 Amidohydrolase BF28_5247 IPR037484 AmhX-like BF28_525 IPR007165 Mycobacterial 4 TMS phage holin, superfamily IV BF28_5250 IPR034603 Dipeptide epimerase BF28_5250 IPR036849 Enolase-like, C-terminal domain superfamily BF28_5250 IPR029017 Enolase-like, N-terminal BF28_5250 IPR029065 Enolase C-terminal domain-like BF28_5250 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal BF28_5250 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain BF28_5253 IPR009921 Domain of unknown function DUF1456 BF28_5254 IPR003594 Histidine kinase/HSP90-like ATPase BF28_5254 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BF28_5254 IPR035965 PAS domain superfamily BF28_5254 IPR000014 PAS domain BF28_5254 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BF28_5254 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BF28_5254 IPR005467 Histidine kinase domain BF28_5254 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BF28_5254 IPR013767 PAS fold BF28_5255 IPR001269 tRNA-dihydrouridine synthase BF28_5255 IPR013785 Aldolase-type TIM barrel BF28_5255 IPR018517 tRNA-dihydrouridine synthase, conserved site BF28_5255 IPR035587 DUS-like, FMN-binding domain BF28_5256 IPR010280 (Uracil-5)-methyltransferase family BF28_5256 IPR030382 SAM-dependent methyltransferase TRM5/TYW2-type BF28_5256 IPR030390 RNA methyltransferase TrmA, active site BF28_5256 IPR030391 RNA methyltransferase TrmA, conserved site BF28_5256 IPR012340 Nucleic acid-binding, OB-fold BF28_5256 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BF28_5256 IPR002792 TRAM domain BF28_5257 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial BF28_5257 IPR002668 Concentrative nucleoside transporter N-terminal domain BF28_5257 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain BF28_5257 IPR008276 Concentrative nucleoside transporter BF28_5257 IPR011657 Concentrative nucleoside transporter C-terminal domain BF28_526 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily BF28_526 IPR003755 HPr(Ser) kinase/phosphorylase BF28_526 IPR011104 HPr kinase/phosphorylase, C-terminal BF28_526 IPR011126 HPr(Ser) kinase/phosphorylase, N-terminal BF28_5260 IPR035097 Peptidase M29, N-terminal BF28_5260 IPR000787 Peptidase M29 BF28_5261 IPR000390 Small multidrug resistance protein family BF28_5262 IPR015590 Aldehyde dehydrogenase domain BF28_5262 IPR016162 Aldehyde dehydrogenase, N-terminal BF28_5262 IPR029510 Aldehyde dehydrogenase, glutamic acid active site BF28_5262 IPR016160 Aldehyde dehydrogenase, cysteine active site BF28_5262 IPR016161 Aldehyde/histidinol dehydrogenase BF28_5262 IPR010102 Succinate semialdehyde dehydrogenase BF28_5262 IPR016163 Aldehyde dehydrogenase, C-terminal BF28_5263 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 BF28_5263 IPR003593 AAA+ ATPase domain BF28_5263 IPR002078 RNA polymerase sigma factor 54 interaction domain BF28_5263 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_5263 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 BF28_5264 IPR005814 Aminotransferase class-III BF28_5264 IPR015424 Pyridoxal phosphate-dependent transferase BF28_5264 IPR004632 4-aminobutyrate aminotransferase, bacterial BF28_5264 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BF28_5264 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BF28_5265 IPR036412 HAD-like superfamily BF28_5265 IPR006439 HAD hydrolase, subfamily IA BF28_5265 IPR041492 Haloacid dehalogenase-like hydrolase BF28_5265 IPR023214 HAD superfamily BF28_5265 IPR023198 Phosphoglycolate phosphatase-like, domain 2 BF28_5265 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic BF28_5266 IPR003333 Mycolic acid cyclopropane synthase BF28_5266 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BF28_5267 IPR005218 Diacylglycerol/lipid kinase BF28_5267 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal BF28_5267 IPR001206 Diacylglycerol kinase, catalytic domain BF28_5267 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily BF28_5268 IPR018027 Asn/Gln amidotransferase BF28_5268 IPR042114 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 1 BF28_5268 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit BF28_5268 IPR017959 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E BF28_5268 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic BF28_5268 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain BF28_5268 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site BF28_5268 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 BF28_5268 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like BF28_5269 IPR020556 Amidase, conserved site BF28_5269 IPR000120 Amidase BF28_5269 IPR036928 Amidase signature (AS) superfamily BF28_5269 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit BF28_5269 IPR023631 Amidase signature domain BF28_527 IPR001640 Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase Lgt BF28_5270 IPR036113 Glu-tRNAGln amidotransferase superfamily, subunit C BF28_5270 IPR003837 Glu-tRNAGln amidotransferase C subunit BF28_5271 IPR038972 Inner membrane protein YiaA-like BF28_5271 IPR008024 YiaAB two helix BF28_5272 IPR011991 ArsR-like helix-turn-helix domain BF28_5272 IPR000835 MarR-type HTH domain BF28_5272 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_5272 IPR036390 Winged helix DNA-binding domain superfamily BF28_5273 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_5273 IPR025723 Anion-transporting ATPase-like domain BF28_5273 IPR040612 ArsA, HSP20-like domain BF28_5273 IPR016300 Arsenical pump ATPase, ArsA/GET3 BF28_5273 IPR008978 HSP20-like chaperone BF28_5276 IPR004872 Lipoprotein NlpA family BF28_5277 IPR035906 MetI-like superfamily BF28_5277 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BF28_5278 IPR026253 Methionine import ATP-binding protein MetN BF28_5278 IPR003593 AAA+ ATPase domain BF28_5278 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_5278 IPR003439 ABC transporter-like BF28_5278 IPR017871 ABC transporter, conserved site BF28_5278 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal BF28_5278 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain BF28_5278 IPR018449 NIL domain BF28_5279 IPR036380 Isochorismatase-like superfamily BF28_5279 IPR000868 Isochorismatase-like BF28_528 IPR006439 HAD hydrolase, subfamily IA BF28_528 IPR023733 Pyrophosphatase PpaX BF28_528 IPR023198 Phosphoglycolate phosphatase-like, domain 2 BF28_528 IPR036412 HAD-like superfamily BF28_528 IPR023214 HAD superfamily BF28_528 IPR041492 Haloacid dehalogenase-like hydrolase BF28_528 IPR006549 HAD-superfamily hydrolase,subfamily IIIA BF28_5281 IPR005932 1-pyrroline-5-carboxylate dehydrogenase BF28_5281 IPR016162 Aldehyde dehydrogenase, N-terminal BF28_5281 IPR015590 Aldehyde dehydrogenase domain BF28_5281 IPR016163 Aldehyde dehydrogenase, C-terminal BF28_5281 IPR029510 Aldehyde dehydrogenase, glutamic acid active site BF28_5281 IPR016160 Aldehyde dehydrogenase, cysteine active site BF28_5281 IPR016161 Aldehyde/histidinol dehydrogenase BF28_5282 IPR002781 Transmembrane protein TauE-like BF28_5283 IPR011426 CamS sex pheromone cAM373 BF28_5284 IPR033136 NAD-dependent DNA ligase, conserved site BF28_5284 IPR001679 NAD-dependent DNA ligase BF28_5284 IPR013839 NAD-dependent DNA ligase, adenylation BF28_5284 IPR013840 NAD-dependent DNA ligase, N-terminal BF28_5284 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 BF28_5284 IPR018239 NAD-dependent DNA ligase, active site BF28_5284 IPR036420 BRCT domain superfamily BF28_5284 IPR001357 BRCT domain BF28_5284 IPR012340 Nucleic acid-binding, OB-fold BF28_5284 IPR004150 NAD-dependent DNA ligase, OB-fold BF28_5284 IPR010994 RuvA domain 2-like BF28_5284 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type BF28_5284 IPR041663 DisA/LigA, helix-hairpin-helix motif BF28_5285 IPR014017 UvrD-like DNA helicase, C-terminal BF28_5285 IPR000212 DNA helicase, UvrD/REP type BF28_5285 IPR005751 ATP-dependent DNA helicase PcrA BF28_5285 IPR014016 UvrD-like helicase, ATP-binding domain BF28_5285 IPR034739 UvrD/AddA helicase, N-terminal BF28_5285 IPR013986 DExx box DNA helicase domain superfamily BF28_5285 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_5286 IPR038597 GGGP/HepGP synthase superfamily BF28_5286 IPR008205 Geranylgeranylglyceryl phosphate synthase/Heptaprenylglyceryl phosphate synthase BF28_5286 IPR039074 GGGP/HepGP synthase group I BF28_529 IPR001451 Hexapeptide repeat BF28_529 IPR011004 Trimeric LpxA-like superfamily BF28_5290 IPR013815 ATP-grasp fold, subdomain 1 BF28_5290 IPR020559 Phosphoribosylglycinamide synthetase, conserved site BF28_5290 IPR000115 Phosphoribosylglycinamide synthetase BF28_5290 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain BF28_5290 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily BF28_5290 IPR011761 ATP-grasp fold BF28_5290 IPR016185 Pre-ATP-grasp domain superfamily BF28_5290 IPR011054 Rudiment single hybrid motif BF28_5290 IPR020560 Phosphoribosylglycinamide synthetase, C-domain BF28_5290 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal BF28_5291 IPR024051 AICAR transformylase, duplicated domain superfamily BF28_5291 IPR002695 Bifunctional purine biosynthesis protein PurH-like BF28_5291 IPR011607 Methylglyoxal synthase-like domain BF28_5291 IPR016193 Cytidine deaminase-like BF28_5291 IPR036914 Methylglyoxal synthase-like domain superfamily BF28_5292 IPR036477 Formyl transferase, N-terminal domain superfamily BF28_5292 IPR001555 Phosphoribosylglycinamide formyltransferase, active site BF28_5292 IPR004607 Phosphoribosylglycinamide formyltransferase BF28_5292 IPR002376 Formyl transferase, N-terminal BF28_5293 IPR010918 PurM-like, C-terminal domain BF28_5293 IPR036921 PurM-like, N-terminal domain superfamily BF28_5293 IPR016188 PurM-like, N-terminal domain BF28_5293 IPR036676 PurM-like, C-terminal domain superfamily BF28_5293 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase BF28_5294 IPR035584 Amidophosphoribosyltransferase, N-terminal BF28_5294 IPR005854 Amidophosphoribosyltransferase BF28_5294 IPR029057 Phosphoribosyltransferase-like BF28_5294 IPR000836 Phosphoribosyltransferase domain BF28_5294 IPR017932 Glutamine amidotransferase type 2 domain BF28_5294 IPR029055 Nucleophile aminohydrolases, N-terminal BF28_5295 IPR010074 Phosphoribosylformylglycinamidine subunit PurL BF28_5295 IPR036921 PurM-like, N-terminal domain superfamily BF28_5295 IPR036676 PurM-like, C-terminal domain superfamily BF28_5295 IPR010918 PurM-like, C-terminal domain BF28_5295 IPR041609 Phosphoribosylformylglycinamidine synthase, linker domain BF28_5295 IPR016188 PurM-like, N-terminal domain BF28_5296 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ BF28_5296 IPR017926 Glutamine amidotransferase BF28_5296 IPR029062 Class I glutamine amidotransferase-like BF28_5297 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS BF28_5297 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily BF28_5298 IPR028923 SAICAR synthetase/ADE2, N-terminal BF28_5298 IPR033934 Bacterial and archaeal 5-aminoimidazole-4-(N-succinylcarboxamide) ribonucleotide synthase BF28_5298 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase BF28_5298 IPR018236 SAICAR synthetase, conserved site BF28_5299 IPR008948 L-Aspartase-like BF28_5299 IPR020557 Fumarate lyase, conserved site BF28_5299 IPR000362 Fumarate lyase family BF28_5299 IPR022761 Fumarate lyase, N-terminal BF28_5299 IPR024083 Fumarase/histidase, N-terminal BF28_5299 IPR019468 Adenylosuccinate lyase C-terminal BF28_5299 IPR004769 Adenylosuccinate lyase BF28_53 IPR036394 Ribosomal protein L22/L17 superfamily BF28_53 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type BF28_53 IPR001063 Ribosomal protein L22/L17 BF28_53 IPR018260 Ribosomal protein L22/L17, conserved site BF28_530 IPR013026 Tetratricopeptide repeat-containing domain BF28_530 IPR011990 Tetratricopeptide-like helical domain superfamily BF28_530 IPR019734 Tetratricopeptide repeat BF28_5300 IPR011761 ATP-grasp fold BF28_5300 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type BF28_5300 IPR013815 ATP-grasp fold, subdomain 1 BF28_5300 IPR016185 Pre-ATP-grasp domain superfamily BF28_5300 IPR011054 Rudiment single hybrid motif BF28_5300 IPR040686 Phosphoribosylaminoimidazole carboxylase, C-terminal domain BF28_5300 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit BF28_5301 IPR035893 PurE domain superfamily BF28_5301 IPR024694 PurE, prokaryotic type BF28_5301 IPR000031 PurE domain BF28_5301 IPR033747 Class I PurE BF28_5302 IPR033747 Class I PurE BF28_5302 IPR000031 PurE domain BF28_5302 IPR024694 PurE, prokaryotic type BF28_5302 IPR035893 PurE domain superfamily BF28_5308 IPR000620 EamA domain BF28_531 IPR036188 FAD/NAD(P)-binding domain superfamily BF28_531 IPR005982 Thioredoxin reductase BF28_531 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site BF28_531 IPR023753 FAD/NAD(P)-binding domain BF28_5312 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_5312 IPR039420 Transcriptional regulatory protein WalR-like BF28_5312 IPR016032 Signal transduction response regulator, C-terminal effector BF28_5312 IPR001867 OmpR/PhoB-type DNA-binding domain BF28_5312 IPR001789 Signal transduction response regulator, receiver domain BF28_5312 IPR011006 CheY-like superfamily BF28_5313 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BF28_5313 IPR003594 Histidine kinase/HSP90-like ATPase BF28_5313 IPR005467 Histidine kinase domain BF28_5313 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BF28_5313 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BF28_5313 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BF28_5314 IPR003593 AAA+ ATPase domain BF28_5314 IPR003439 ABC transporter-like BF28_5314 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_5314 IPR017871 ABC transporter, conserved site BF28_5316 IPR003824 Undecaprenyl-diphosphatase UppP BF28_5326 IPR036249 Thioredoxin-like superfamily BF28_5326 IPR001853 DSBA-like thioredoxin domain BF28_533 IPR015797 NUDIX hydrolase-like domain superfamily BF28_533 IPR020476 NUDIX hydrolase BF28_533 IPR000086 NUDIX hydrolase domain BF28_5332 IPR013767 PAS fold BF28_5332 IPR031967 PhoR, single Cache-like domain BF28_5332 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BF28_5332 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BF28_5332 IPR005467 Histidine kinase domain BF28_5332 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BF28_5332 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BF28_5332 IPR003594 Histidine kinase/HSP90-like ATPase BF28_5332 IPR035965 PAS domain superfamily BF28_5332 IPR000014 PAS domain BF28_5333 IPR011006 CheY-like superfamily BF28_5333 IPR001867 OmpR/PhoB-type DNA-binding domain BF28_5333 IPR016032 Signal transduction response regulator, C-terminal effector BF28_5333 IPR001789 Signal transduction response regulator, receiver domain BF28_5333 IPR039420 Transcriptional regulatory protein WalR-like BF28_5333 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_5334 IPR026033 Azaguanine-like transporters BF28_5334 IPR006043 Xanthine/uracil/vitamin C permease BF28_5335 IPR004739 GMP synthase, glutamine amidotransferase BF28_5335 IPR017926 Glutamine amidotransferase BF28_5335 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BF28_5335 IPR022955 GMP synthase BF28_5335 IPR025777 GMP synthetase ATP pyrophosphatase domain BF28_5335 IPR022310 NAD/GMP synthase BF28_5335 IPR029062 Class I glutamine amidotransferase-like BF28_5335 IPR001674 GMP synthase, C-terminal BF28_5337 IPR003615 HNH nuclease BF28_5337 IPR006829 LXG domain BF28_5337 IPR027797 Pre-toxin TG domain BF28_5338 IPR002423 Chaperonin Cpn60/TCP-1 family BF28_5338 IPR027413 GroEL-like equatorial domain superfamily BF28_5338 IPR027409 GroEL-like apical domain superfamily BF28_5338 IPR001844 Chaperonin Cpn60 BF28_5338 IPR018370 Chaperonin Cpn60, conserved site BF28_5338 IPR027410 TCP-1-like chaperonin intermediate domain superfamily BF28_5339 IPR020818 GroES chaperonin family BF28_5339 IPR011032 GroES-like superfamily BF28_5339 IPR018369 Chaperonin GroES, conserved site BF28_5339 IPR037124 GroES chaperonin superfamily BF28_534 IPR005337 RapZ-like family BF28_534 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_5340 IPR003675 CAAX prenyl protease 2 BF28_5342 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_5342 IPR022876 Redox-sensing transcriptional repressor Rex BF28_5342 IPR036390 Winged helix DNA-binding domain superfamily BF28_5342 IPR003781 CoA-binding BF28_5342 IPR009718 Rex DNA-binding, C-terminal domain BF28_5342 IPR036291 NAD(P)-binding domain superfamily BF28_5343 IPR017871 ABC transporter, conserved site BF28_5343 IPR003593 AAA+ ATPase domain BF28_5343 IPR032524 ABC transporter Uup, C-terminal BF28_5343 IPR032781 ABC-transporter extension domain BF28_5343 IPR003439 ABC transporter-like BF28_5343 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_5343 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily BF28_5344 IPR017861 Kae1/TsaD family BF28_5344 IPR000905 Gcp-like domain BF28_5344 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD BF28_5344 IPR017860 Peptidase M22, conserved site BF28_5345 IPR000182 GNAT domain BF28_5345 IPR016181 Acyl-CoA N-acyltransferase BF28_5345 IPR006464 N-acetyltransferase RimI/Ard1 BF28_5346 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB BF28_5346 IPR000905 Gcp-like domain BF28_5347 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE BF28_5347 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_535 IPR010119 Gluconeogenesis factor BF28_535 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 BF28_535 IPR038136 Gluconeogenesis factor superfamily BF28_536 IPR039518 WhiA, LAGLIDADG-like domain BF28_536 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_536 IPR023054 Sporulation regulator WhiA, C-terminal BF28_536 IPR027434 Homing endonuclease BF28_536 IPR003802 Sporulation regulator WhiA BF28_536 IPR018478 Sporulation transcription regulator WhiA, N-terminal domain BF28_5365 IPR035240 SprT-like, zinc ribbon domain BF28_5365 IPR023524 Uncharacterised protein family SprT-like BF28_5365 IPR006640 SprT-like BF28_5366 IPR006641 YqgF/RNase H-like domain BF28_5366 IPR032639 Tex protein, YqgF-like domain BF28_5366 IPR018974 Tex-like protein, N-terminal BF28_5366 IPR023319 Tex-like protein, HTH domain superfamily BF28_5366 IPR012337 Ribonuclease H-like superfamily BF28_5366 IPR012340 Nucleic acid-binding, OB-fold BF28_5366 IPR037027 YqgF/RNase H-like domain superfamily BF28_5366 IPR041692 HHH domain 9 BF28_5366 IPR003029 S1 domain BF28_5366 IPR010994 RuvA domain 2-like BF28_5366 IPR023323 Tex-like domain superfamily BF28_5366 IPR022967 RNA-binding domain, S1 BF28_5367 IPR003477 mRNA interferase PemK-like BF28_5367 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor BF28_5368 IPR010985 Ribbon-helix-helix BF28_5368 IPR002145 Ribbon-helix-helix protein, CopG BF28_5368 IPR013321 Arc-type ribbon-helix-helix BF28_5369 IPR001608 Alanine racemase, N-terminal BF28_5369 IPR029066 PLP-binding barrel BF28_5369 IPR000821 Alanine racemase BF28_5369 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal BF28_5369 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site BF28_5369 IPR011079 Alanine racemase, C-terminal BF28_537 IPR000032 Phosphocarrier protein HPr-like BF28_537 IPR002114 Phosphotransferase system, HPr serine phosphorylation site BF28_537 IPR035895 HPr-like superfamily BF28_5370 IPR029046 Lipoprotein localisation LolA/LolB/LppX BF28_5371 IPR037143 4'-phosphopantetheinyl transferase domain superfamily BF28_5371 IPR008278 4'-phosphopantetheinyl transferase domain BF28_5371 IPR002582 Holo-[acyl carrier protein] synthase BF28_5371 IPR004568 Phosphopantetheine-protein transferase domain BF28_5372 IPR004601 UV-endonuclease UvdE BF28_5372 IPR036237 Xylose isomerase-like superfamily BF28_5372 IPR023520 UV-endonuclease UvdE, bacterial BF28_5373 IPR022764 Peptidase S54, rhomboid domain BF28_5373 IPR019734 Tetratricopeptide repeat BF28_5373 IPR011990 Tetratricopeptide-like helical domain superfamily BF28_5373 IPR013026 Tetratricopeptide repeat-containing domain BF28_5373 IPR035952 Rhomboid-like superfamily BF28_5374 IPR014001 Helicase superfamily 1/2, ATP-binding domain BF28_5374 IPR030880 DEAD-box ATP-dependent RNA helicase CshA BF28_5374 IPR001650 Helicase, C-terminal BF28_5374 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_5374 IPR014014 RNA helicase, DEAD-box type, Q motif BF28_5374 IPR011545 DEAD/DEAH box helicase domain BF28_5374 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site BF28_5375 IPR004101 Mur ligase, C-terminal BF28_5375 IPR036615 Mur ligase, C-terminal domain superfamily BF28_5375 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase BF28_5375 IPR013221 Mur ligase, central BF28_5375 IPR035911 MurE/MurF, N-terminal BF28_5375 IPR000713 Mur ligase, N-terminal catalytic domain BF28_5375 IPR036565 Mur-like, catalytic domain superfamily BF28_5376 IPR011127 D-alanine--D-alanine ligase, N-terminal domain BF28_5376 IPR011095 D-alanine--D-alanine ligase, C-terminal BF28_5376 IPR005905 D-alanine--D-alanine ligase BF28_5376 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site BF28_5376 IPR013815 ATP-grasp fold, subdomain 1 BF28_5376 IPR011761 ATP-grasp fold BF28_5376 IPR016185 Pre-ATP-grasp domain superfamily BF28_5379 IPR011234 Fumarylacetoacetase-like, C-terminal BF28_5379 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily BF28_538 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA BF28_538 IPR001907 ATP-dependent Clp protease proteolytic subunit BF28_538 IPR029045 ClpP/crotonase-like domain superfamily BF28_538 IPR033135 ClpP, histidine active site BF28_538 IPR018215 ClpP, Ser active site BF28_5380 IPR005956 4-hydroxyphenylpyruvate dioxygenase BF28_5380 IPR041736 4-hydroxyphenylpyruvate dioxygenase, N-terminal BF28_5380 IPR041735 4-hydroxyphenylpyruvate dioxygenase, C-terminal BF28_5380 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain BF28_5380 IPR037523 Vicinal oxygen chelate (VOC) domain BF28_5380 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BF28_5386 IPR036412 HAD-like superfamily BF28_5386 IPR006379 HAD-superfamily hydrolase, subfamily IIB BF28_5386 IPR023214 HAD superfamily BF28_5386 IPR000150 Cof family BF28_5387 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_5387 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal BF28_5387 IPR017871 ABC transporter, conserved site BF28_5387 IPR003439 ABC transporter-like BF28_5387 IPR003593 AAA+ ATPase domain BF28_5388 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_5388 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal BF28_5388 IPR017871 ABC transporter, conserved site BF28_5388 IPR003439 ABC transporter-like BF28_5388 IPR003593 AAA+ ATPase domain BF28_539 IPR023090 UPF0702, alpha/beta domain superfamily BF28_539 IPR007353 Protein of unknown function DUF421 BF28_5390 IPR035906 MetI-like superfamily BF28_5390 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BF28_5391 IPR030678 Peptide/nickel binding protein, MppA-type BF28_5391 IPR039424 Solute-binding protein family 5 BF28_5391 IPR023765 Solute-binding protein family 5, conserved site BF28_5391 IPR000914 Solute-binding protein family 5 domain BF28_5391 IPR011980 Nickel ABC transporter, substrate-binding protein NikA BF28_5395 IPR003593 AAA+ ATPase domain BF28_5395 IPR032524 ABC transporter Uup, C-terminal BF28_5395 IPR032781 ABC-transporter extension domain BF28_5395 IPR003439 ABC transporter-like BF28_5395 IPR017871 ABC transporter, conserved site BF28_5395 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_5395 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily BF28_5399 IPR018763 Protein of unknown function DUF2334 BF28_54 IPR005732 Ribosomal protein S19, bacterial-type BF28_54 IPR020934 Ribosomal protein S19 conserved site BF28_54 IPR023575 Ribosomal protein S19, superfamily BF28_54 IPR002222 Ribosomal protein S19/S15 BF28_5401 IPR018228 Deoxyribonuclease, TatD-related, conserved site BF28_5401 IPR001130 TatD family BF28_5401 IPR032466 Metal-dependent hydrolase BF28_5404 IPR003740 Uncharacterised membrane protein YitT BF28_5404 IPR019264 Domain of unknown function DUF2179 BF28_5404 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal BF28_5406 IPR000843 LacI-type HTH domain BF28_5406 IPR010982 Lambda repressor-like, DNA-binding domain superfamily BF28_5406 IPR001761 Periplasmic binding protein/LacI sugar binding domain BF28_5406 IPR028082 Periplasmic binding protein-like I BF28_5408 IPR002123 Phospholipid/glycerol acyltransferase BF28_5408 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase BF28_541 IPR005562 SpoVA BF28_541 IPR014204 Sporulation stage V, protein AE BF28_5410 IPR025417 YrzO-like protein BF28_5411 IPR000620 EamA domain BF28_5412 IPR005119 LysR, substrate-binding BF28_5412 IPR036390 Winged helix DNA-binding domain superfamily BF28_5412 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_5412 IPR000847 Transcription regulator HTH, LysR BF28_5415 IPR024370 PBP domain BF28_5415 IPR041657 Helix-turn-helix domain, group 17 BF28_5415 IPR010093 SinI-like, DNA-binding domain BF28_5415 IPR009061 Putative DNA-binding domain superfamily BF28_5416 IPR041879 YvgL-like, substrate binding domain BF28_5416 IPR005950 Molybdate ABC transporter, substrate-binding protein BF28_5417 IPR011867 Molybdate ABC transporter, permease protein BF28_5417 IPR035906 MetI-like superfamily BF28_5417 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BF28_5418 IPR010651 Sugar transport protein BF28_5419 IPR006419 Nicotinamide mononucleotide transporter PnuC BF28_542 IPR038369 Stage V sporulation AD superfamily BF28_542 IPR016039 Thiolase-like BF28_542 IPR010894 Stage V sporulation AD BF28_5421 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily BF28_5421 IPR036291 NAD(P)-binding domain superfamily BF28_5421 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal BF28_5421 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain BF28_5421 IPR000304 Pyrroline-5-carboxylate reductase BF28_5422 IPR036812 NADP-dependent oxidoreductase domain superfamily BF28_5422 IPR023210 NADP-dependent oxidoreductase domain BF28_5422 IPR020471 Aldo/keto reductase BF28_5422 IPR018170 Aldo/keto reductase, conserved site BF28_5423 IPR000914 Solute-binding protein family 5 domain BF28_5423 IPR039424 Solute-binding protein family 5 BF28_5423 IPR030678 Peptide/nickel binding protein, MppA-type BF28_5423 IPR023765 Solute-binding protein family 5, conserved site BF28_5424 IPR030678 Peptide/nickel binding protein, MppA-type BF28_5424 IPR023765 Solute-binding protein family 5, conserved site BF28_5424 IPR039424 Solute-binding protein family 5 BF28_5424 IPR000914 Solute-binding protein family 5 domain BF28_5426 IPR001647 DNA-binding HTH domain, TetR-type BF28_5426 IPR009057 Homeobox-like domain superfamily BF28_5426 IPR023772 DNA-binding HTH domain, TetR-type, conserved site BF28_5428 IPR008979 Galactose-binding-like domain superfamily BF28_5428 IPR009057 Homeobox-like domain superfamily BF28_5428 IPR018060 DNA binding HTH domain, AraC-type BF28_543 IPR005562 SpoVA BF28_543 IPR014203 Sporulation stage V, protein AC BF28_5430 IPR030678 Peptide/nickel binding protein, MppA-type BF28_5430 IPR000914 Solute-binding protein family 5 domain BF28_5430 IPR023765 Solute-binding protein family 5, conserved site BF28_5430 IPR039424 Solute-binding protein family 5 BF28_5431 IPR017871 ABC transporter, conserved site BF28_5431 IPR003593 AAA+ ATPase domain BF28_5431 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_5431 IPR003439 ABC transporter-like BF28_5431 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal BF28_5432 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_5432 IPR003439 ABC transporter-like BF28_5432 IPR017871 ABC transporter, conserved site BF28_5432 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal BF28_5432 IPR003593 AAA+ ATPase domain BF28_5433 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BF28_5433 IPR035906 MetI-like superfamily BF28_5433 IPR025966 Oligopeptide transport permease C-like, N-terminal domain BF28_5434 IPR035906 MetI-like superfamily BF28_5434 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BF28_5437 IPR036259 MFS transporter superfamily BF28_5437 IPR020846 Major facilitator superfamily domain BF28_5437 IPR011701 Major facilitator superfamily BF28_5437 IPR004812 Drug resistance transporter Bcr/CmlA subfamily BF28_5439 IPR036259 MFS transporter superfamily BF28_5439 IPR011701 Major facilitator superfamily BF28_5439 IPR020846 Major facilitator superfamily domain BF28_5440 IPR016169 FAD-binding, type PCMH, subdomain 2 BF28_5440 IPR016164 FAD-linked oxidase-like, C-terminal BF28_5440 IPR006094 FAD linked oxidase, N-terminal BF28_5440 IPR036318 FAD-binding, type PCMH-like superfamily BF28_5440 IPR016166 FAD-binding domain, PCMH-type BF28_5443 IPR004872 Lipoprotein NlpA family BF28_5444 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_5444 IPR018449 NIL domain BF28_5444 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain BF28_5444 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal BF28_5444 IPR017871 ABC transporter, conserved site BF28_5444 IPR003593 AAA+ ATPase domain BF28_5444 IPR003439 ABC transporter-like BF28_5444 IPR026253 Methionine import ATP-binding protein MetN BF28_5445 IPR035906 MetI-like superfamily BF28_5445 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BF28_5446 IPR002347 Short-chain dehydrogenase/reductase SDR BF28_5446 IPR020904 Short-chain dehydrogenase/reductase, conserved site BF28_5446 IPR036291 NAD(P)-binding domain superfamily BF28_5452 IPR011659 WD40-like Beta Propeller BF28_5452 IPR011042 Six-bladed beta-propeller, TolB-like BF28_5452 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain BF28_5452 IPR029058 Alpha/Beta hydrolase fold BF28_5453 IPR006183 6-phosphogluconate dehydrogenase BF28_5453 IPR036291 NAD(P)-binding domain superfamily BF28_5453 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily BF28_5453 IPR013328 6-phosphogluconate dehydrogenase, domain 2 BF28_5453 IPR006114 6-phosphogluconate dehydrogenase, C-terminal BF28_5453 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating BF28_5453 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding BF28_5453 IPR006184 6-phosphogluconate-binding site BF28_5454 IPR003474 Gluconate transporter BF28_5455 IPR000577 Carbohydrate kinase, FGGY BF28_5455 IPR018485 Carbohydrate kinase, FGGY, C-terminal BF28_5455 IPR018483 Carbohydrate kinase, FGGY, conserved site BF28_5455 IPR018484 Carbohydrate kinase, FGGY, N-terminal BF28_5455 IPR006002 Gluconate kinase BF28_5456 IPR036390 Winged helix DNA-binding domain superfamily BF28_5456 IPR011711 GntR, C-terminal BF28_5456 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_5456 IPR008920 Transcription regulator FadR/GntR, C-terminal BF28_5456 IPR000524 Transcription regulator HTH, GntR BF28_5457 IPR000073 Alpha/beta hydrolase fold-1 BF28_5457 IPR029058 Alpha/Beta hydrolase fold BF28_5458 IPR035466 GlmS/AgaS, SIS domain 1 BF28_5458 IPR001347 Sugar isomerase (SIS) BF28_5458 IPR029055 Nucleophile aminohydrolases, N-terminal BF28_5458 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising BF28_5458 IPR035490 GlmS/FrlB, SIS domain 2 BF28_5458 IPR017932 Glutamine amidotransferase type 2 domain BF28_5459 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III BF28_5459 IPR006352 Phosphoglucosamine mutase, bacterial type BF28_5459 IPR005841 Alpha-D-phosphohexomutase superfamily BF28_5459 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II BF28_5459 IPR016066 Alpha-D-phosphohexomutase, conserved site BF28_5459 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily BF28_5459 IPR005843 Alpha-D-phosphohexomutase, C-terminal BF28_5459 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III BF28_5459 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I BF28_5461 IPR021027 Transposase, putative, helix-turn-helix domain BF28_5461 IPR010095 Transposase IS605, OrfB, C-terminal BF28_5461 IPR001959 Probable transposase, IS891/IS1136/IS1341 BF28_5463 IPR036465 von Willebrand factor A-like domain superfamily BF28_5463 IPR002035 von Willebrand factor, type A BF28_5466 IPR000380 DNA topoisomerase, type IA BF28_5466 IPR003601 DNA topoisomerase, type IA, domain 2 BF28_5466 IPR034144 DNA topoisomerase 3-like, TOPRIM domain BF28_5466 IPR006171 TOPRIM domain BF28_5466 IPR005738 DNA topoisomerase III BF28_5466 IPR003602 DNA topoisomerase, type IA, DNA-binding domain BF28_5466 IPR023405 DNA topoisomerase, type IA, core domain BF28_5466 IPR023406 DNA topoisomerase, type IA, active site BF28_5466 IPR013497 DNA topoisomerase, type IA, central BF28_5466 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 BF28_5466 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 BF28_5466 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 BF28_5471 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BF28_5471 IPR015424 Pyridoxal phosphate-dependent transferase BF28_5471 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site BF28_5471 IPR004839 Aminotransferase, class I/classII BF28_5471 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BF28_5474 IPR003593 AAA+ ATPase domain BF28_5474 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_5474 IPR012763 DNA polymerase III, subunit gamma/ tau BF28_5474 IPR022754 DNA polymerase III, gamma subunit, domain III BF28_5474 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal BF28_5474 IPR001270 ClpA/B family BF28_548 IPR013026 Tetratricopeptide repeat-containing domain BF28_548 IPR011990 Tetratricopeptide-like helical domain superfamily BF28_548 IPR041617 MalT-like TPR region BF28_548 IPR019734 Tetratricopeptide repeat BF28_548 IPR040702 Response regulator aspartate phosphatase, N-terminal BF28_5480 IPR012337 Ribonuclease H-like superfamily BF28_5480 IPR001584 Integrase, catalytic core BF28_5480 IPR038965 Transposase InsF-like BF28_5480 IPR025948 HTH-like domain BF28_5480 IPR036397 Ribonuclease H superfamily BF28_5481 IPR024203 5-deoxy-glucuronate isomerase, IolB BF28_5481 IPR011051 RmlC-like cupin domain superfamily BF28_5481 IPR023770 5-deoxy-glucuronate isomerase, Bacilli BF28_5481 IPR021120 KduI/IolB isomerase BF28_5481 IPR014710 RmlC-like jelly roll fold BF28_5482 IPR011289 Fructose-1,6-bisphosphate aldolase, class 2 BF28_5482 IPR013785 Aldolase-type TIM barrel BF28_5482 IPR000771 Fructose-bisphosphate aldolase, class-II BF28_5483 IPR028082 Periplasmic binding protein-like I BF28_5483 IPR010982 Lambda repressor-like, DNA-binding domain superfamily BF28_5483 IPR000843 LacI-type HTH domain BF28_5484 IPR013022 Xylose isomerase-like, TIM barrel domain BF28_5484 IPR036237 Xylose isomerase-like superfamily BF28_5484 IPR030823 IolE/MocC family BF28_5484 IPR023952 Inosose dehydratase BF28_5485 IPR030817 3,5/4-Trihydroxycyclohexa-1,2-dione hydrolase BF28_5485 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding BF28_5485 IPR000399 TPP-binding enzyme, conserved site BF28_5485 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain BF28_5485 IPR029035 DHS-like NAD/FAD-binding domain superfamily BF28_5485 IPR012000 Thiamine pyrophosphate enzyme, central domain BF28_5485 IPR023757 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase, Firmicutes BF28_5485 IPR029061 Thiamin diphosphate-binding fold BF28_5486 IPR016162 Aldehyde dehydrogenase, N-terminal BF28_5486 IPR023510 Methylmalonate-semialdehyde dehydrogenase, Gram-positive bacteria BF28_5486 IPR010061 Methylmalonate-semialdehyde dehydrogenase BF28_5486 IPR015590 Aldehyde dehydrogenase domain BF28_5486 IPR016160 Aldehyde dehydrogenase, cysteine active site BF28_5486 IPR016163 Aldehyde dehydrogenase, C-terminal BF28_5486 IPR016161 Aldehyde/histidinol dehydrogenase BF28_5487 IPR011611 Carbohydrate kinase PfkB BF28_5487 IPR030830 5-Dehydro-2-deoxygluconokinase BF28_5487 IPR022841 5-dehydro-2-deoxygluconokinase, Firmicutes BF28_5487 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site BF28_5487 IPR029056 Ribokinase-like BF28_5487 IPR023314 5-Dehydro-2-deoxygluconokinase-like superfamily BF28_5488 IPR004104 Oxidoreductase, C-terminal BF28_5488 IPR036291 NAD(P)-binding domain superfamily BF28_5488 IPR000683 Oxidoreductase, N-terminal BF28_5488 IPR030827 Inositol 2-dehydrogenase BF28_5489 IPR004748 Polyol permease BF28_5489 IPR036259 MFS transporter superfamily BF28_5489 IPR020846 Major facilitator superfamily domain BF28_5489 IPR011701 Major facilitator superfamily BF28_5490 IPR028082 Periplasmic binding protein-like I BF28_5490 IPR010982 Lambda repressor-like, DNA-binding domain superfamily BF28_5490 IPR000843 LacI-type HTH domain BF28_5491 IPR000843 LacI-type HTH domain BF28_5491 IPR010982 Lambda repressor-like, DNA-binding domain superfamily BF28_5491 IPR028082 Periplasmic binding protein-like I BF28_5492 IPR020846 Major facilitator superfamily domain BF28_5492 IPR005829 Sugar transporter, conserved site BF28_5492 IPR003663 Sugar/inositol transporter BF28_5492 IPR036259 MFS transporter superfamily BF28_5492 IPR005828 Major facilitator, sugar transporter-like BF28_5493 IPR030827 Inositol 2-dehydrogenase BF28_5493 IPR000683 Oxidoreductase, N-terminal BF28_5493 IPR036291 NAD(P)-binding domain superfamily BF28_5493 IPR004104 Oxidoreductase, C-terminal BF28_55 IPR008991 Translation protein SH3-like domain superfamily BF28_55 IPR014726 Ribosomal protein L2, domain 3 BF28_55 IPR022671 Ribosomal protein L2, conserved site BF28_55 IPR022669 Ribosomal protein L2, C-terminal BF28_55 IPR005880 Ribosomal protein L2, bacterial/organellar-type BF28_55 IPR002171 Ribosomal protein L2 BF28_55 IPR014722 Ribosomal protein L2, domain 2 BF28_55 IPR012340 Nucleic acid-binding, OB-fold BF28_55 IPR022666 Ribosomal Proteins L2, RNA binding domain BF28_5505 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BF28_5505 IPR035680 Hydroxyacylglutathione hydrolase, MBL domain BF28_5505 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain BF28_5505 IPR017782 Hydroxyacylglutathione hydrolase BF28_5505 IPR001279 Metallo-beta-lactamase BF28_5510 IPR014756 Immunoglobulin E-set BF28_5510 IPR020879 N-acetylglucosamine-binding protein A BF28_5510 IPR041029 N-acetylglucosamine binding protein A domain 2 BF28_5510 IPR004302 Cellulose/chitin-binding protein, N-terminal BF28_5513 IPR038300 SASP, alpha/beta-type superfamily BF28_5513 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site BF28_5513 IPR001448 Small acid-soluble spore protein, alpha/beta-type BF28_5514 IPR003660 HAMP domain BF28_5514 IPR004090 Chemotaxis methyl-accepting receptor BF28_5514 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain BF28_5515 IPR010095 Transposase IS605, OrfB, C-terminal BF28_5515 IPR021027 Transposase, putative, helix-turn-helix domain BF28_5515 IPR001959 Probable transposase, IS891/IS1136/IS1341 BF28_5519 IPR006750 Putative inner membrane exporter, YdcZ BF28_552 IPR000394 RNA polymerase sigma factor 54 BF28_552 IPR007046 RNA polymerase sigma factor 54, core-binding domain BF28_552 IPR007634 RNA polymerase sigma factor 54, DNA-binding BF28_552 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily BF28_5520 IPR001295 Dihydroorotate dehydrogenase, conserved site BF28_5520 IPR005720 Dihydroorotate dehydrogenase domain BF28_5520 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 BF28_5520 IPR013785 Aldolase-type TIM barrel BF28_5520 IPR005719 Dihydroorotate dehydrogenase, class 2 BF28_5521 IPR005720 Dihydroorotate dehydrogenase domain BF28_5521 IPR005719 Dihydroorotate dehydrogenase, class 2 BF28_5521 IPR001295 Dihydroorotate dehydrogenase, conserved site BF28_5521 IPR013785 Aldolase-type TIM barrel BF28_5524 IPR028261 Dihydroprymidine dehydrogenase domain II BF28_5524 IPR023753 FAD/NAD(P)-binding domain BF28_5524 IPR036188 FAD/NAD(P)-binding domain superfamily BF28_5524 IPR009051 Alpha-helical ferredoxin BF28_5525 IPR036412 HAD-like superfamily BF28_5525 IPR023214 HAD superfamily BF28_5525 IPR041492 Haloacid dehalogenase-like hydrolase BF28_5525 IPR006439 HAD hydrolase, subfamily IA BF28_5525 IPR023198 Phosphoglycolate phosphatase-like, domain 2 BF28_5525 IPR023733 Pyrophosphatase PpaX BF28_5526 IPR008231 Probable chaperone CsaA BF28_5526 IPR012340 Nucleic acid-binding, OB-fold BF28_5526 IPR002547 tRNA-binding domain BF28_5527 IPR000620 EamA domain BF28_5529 IPR036412 HAD-like superfamily BF28_5529 IPR015797 NUDIX hydrolase-like domain superfamily BF28_5529 IPR020084 NUDIX hydrolase, conserved site BF28_5529 IPR020476 NUDIX hydrolase BF28_5529 IPR023214 HAD superfamily BF28_5529 IPR000086 NUDIX hydrolase domain BF28_5529 IPR006357 HAD-superfamily hydrolase, subfamily IIA BF28_554 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_554 IPR036390 Winged helix DNA-binding domain superfamily BF28_554 IPR007324 Sugar-binding domain, putative BF28_554 IPR037171 NagB/RpiA transferase-like BF28_5542 IPR007344 GrpB/Dephospho-CoA kinase BF28_5542 IPR000182 GNAT domain BF28_5542 IPR016181 Acyl-CoA N-acyltransferase BF28_5544 IPR020891 Uncharacterised protein family UPF0758, conserved site BF28_5544 IPR010994 RuvA domain 2-like BF28_5544 IPR001405 Uncharacterised protein family UPF0758 BF28_5544 IPR037518 MPN domain BF28_5544 IPR025657 RadC-like JAB domain BF28_5547 IPR027408 PNPase/RNase PH domain superfamily BF28_5547 IPR020568 Ribosomal protein S5 domain 2-type fold BF28_5547 IPR003029 S1 domain BF28_5547 IPR012340 Nucleic acid-binding, OB-fold BF28_5547 IPR036612 K Homology domain, type 1 superfamily BF28_5547 IPR001247 Exoribonuclease, phosphorolytic domain 1 BF28_5547 IPR022967 RNA-binding domain, S1 BF28_5547 IPR004088 K Homology domain, type 1 BF28_5547 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain BF28_5547 IPR004087 K Homology domain BF28_5547 IPR036345 Exoribonuclease, PH domain 2 superfamily BF28_5547 IPR015847 Exoribonuclease, phosphorolytic domain 2 BF28_5547 IPR012162 Polyribonucleotide nucleotidyltransferase BF28_555 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain BF28_555 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site BF28_555 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family BF28_555 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I BF28_555 IPR036291 NAD(P)-binding domain superfamily BF28_555 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain BF28_5555 IPR038765 Papain-like cysteine peptidase superfamily BF28_5555 IPR000064 Endopeptidase, NLPC/P60 domain BF28_5555 IPR023346 Lysozyme-like domain superfamily BF28_556 IPR001576 Phosphoglycerate kinase BF28_556 IPR015911 Phosphoglycerate kinase, conserved site BF28_556 IPR036043 Phosphoglycerate kinase superfamily BF28_556 IPR015824 Phosphoglycerate kinase, N-terminal BF28_557 IPR000652 Triosephosphate isomerase BF28_557 IPR035990 Triosephosphate isomerase superfamily BF28_557 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic BF28_557 IPR020861 Triosephosphate isomerase, active site BF28_557 IPR013785 Aldolase-type TIM barrel BF28_5576 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_5576 IPR028630 RNA polymerase sigma factor RpoD BF28_5576 IPR013324 RNA polymerase sigma factor, region 3/4-like BF28_5576 IPR013325 RNA polymerase sigma factor, region 2 BF28_5576 IPR014284 RNA polymerase sigma-70 like domain BF28_5576 IPR007127 RNA polymerase sigma factor 70, region 1.1 BF28_5576 IPR007630 RNA polymerase sigma-70 region 4 BF28_5576 IPR007624 RNA polymerase sigma-70 region 3 BF28_5576 IPR007627 RNA polymerase sigma-70 region 2 BF28_5576 IPR009042 RNA polymerase sigma-70 region 1.2 BF28_5576 IPR000943 RNA polymerase sigma-70 BF28_5576 IPR042189 Sigma-70 factor, region 1.1 superfamily BF28_5576 IPR012760 RNA polymerase sigma factor RpoD, C-terminal BF28_558 IPR017850 Alkaline-phosphatase-like, core domain superfamily BF28_558 IPR006124 Metalloenzyme BF28_558 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily BF28_558 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent BF28_558 IPR011258 BPG-independent PGAM, N-terminal BF28_5582 IPR019533 Peptidase S26 BF28_5582 IPR019757 Peptidase S26A, signal peptidase I, lysine active site BF28_5582 IPR019756 Peptidase S26A, signal peptidase I, serine active site BF28_5582 IPR019758 Peptidase S26A, signal peptidase I, conserved site BF28_5582 IPR000223 Peptidase S26A, signal peptidase I BF28_5582 IPR036286 LexA/Signal peptidase-like superfamily BF28_559 IPR020810 Enolase, C-terminal TIM barrel domain BF28_559 IPR020811 Enolase, N-terminal BF28_559 IPR036849 Enolase-like, C-terminal domain superfamily BF28_559 IPR000941 Enolase BF28_559 IPR020809 Enolase, conserved site BF28_559 IPR029017 Enolase-like, N-terminal BF28_5592 IPR000477 Reverse transcriptase domain BF28_5594 IPR038965 Transposase InsF-like BF28_5594 IPR036397 Ribonuclease H superfamily BF28_5594 IPR012337 Ribonuclease H-like superfamily BF28_5594 IPR025948 HTH-like domain BF28_5594 IPR001584 Integrase, catalytic core BF28_5596 IPR020852 Ribonucleotide reductase, class Ib, NrdI, bacterial BF28_5596 IPR029039 Flavoprotein-like superfamily BF28_5596 IPR004465 Ribonucleotide reductase Class Ib, NrdI BF28_56 IPR012678 Ribosomal protein L23/L15e core domain superfamily BF28_56 IPR001014 Ribosomal protein L23/L25, conserved site BF28_56 IPR013025 Ribosomal protein L25/L23 BF28_56 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily BF28_560 IPR022975 Pyrimidine-specific ribonucleoside hydrolase RihA BF28_560 IPR036452 Ribonucleoside hydrolase-like BF28_560 IPR023186 Inosine/uridine-preferring nucleoside hydrolase BF28_560 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain BF28_560 IPR015910 Inosine/uridine-preferring nucleoside hydrolase, conserved site BF28_5604 IPR019618 Spore germination protein GerPA/GerPF BF28_5608 IPR010095 Transposase IS605, OrfB, C-terminal BF28_5608 IPR001959 Probable transposase, IS891/IS1136/IS1341 BF28_5608 IPR021027 Transposase, putative, helix-turn-helix domain BF28_561 IPR005538 LrgA/CidA family BF28_561 IPR023760 Holin-like protein CidA BF28_5611 IPR001959 Probable transposase, IS891/IS1136/IS1341 BF28_5611 IPR010095 Transposase IS605, OrfB, C-terminal BF28_5611 IPR021027 Transposase, putative, helix-turn-helix domain BF28_5617 IPR032816 SNARE associated Golgi protein BF28_5619 IPR001867 OmpR/PhoB-type DNA-binding domain BF28_5619 IPR016032 Signal transduction response regulator, C-terminal effector BF28_5619 IPR001789 Signal transduction response regulator, receiver domain BF28_5619 IPR039420 Transcriptional regulatory protein WalR-like BF28_5619 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_5619 IPR011006 CheY-like superfamily BF28_562 IPR007300 CidB/LrgB family BF28_5620 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel BF28_5620 IPR002509 NodB homology domain BF28_5620 IPR023872 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase BF28_5621 IPR006998 DltD BF28_5621 IPR023896 D-alanyl-lipoteichoic acid biosynthesis DltD, Firmicutes BF28_5627 IPR013762 Integrase-like, catalytic domain superfamily BF28_5627 IPR011010 DNA breaking-rejoining enzyme, catalytic core BF28_5627 IPR002104 Integrase, catalytic domain BF28_563 IPR004692 Preprotein translocase SecG subunit BF28_5638 IPR002577 Helix-turn-helix, HxlR type BF28_5638 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_5638 IPR036390 Winged helix DNA-binding domain superfamily BF28_5639 IPR036144 RibA-like superfamily BF28_5639 IPR032677 GTP cyclohydrolase II BF28_5639 IPR000926 GTP cyclohydrolase II, RibA BF28_564 IPR029058 Alpha/Beta hydrolase fold BF28_564 IPR012354 Esterase/lipase BF28_564 IPR022742 Serine aminopeptidase, S33 BF28_5640 IPR004794 Riboflavin biosynthesis protein RibD BF28_5640 IPR024072 Dihydrofolate reductase-like domain superfamily BF28_5640 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal BF28_5640 IPR016193 Cytidine deaminase-like BF28_5640 IPR002125 Cytidine and deoxycytidylate deaminase domain BF28_5640 IPR016192 APOBEC/CMP deaminase, zinc-binding BF28_5640 IPR011549 Riboflavin-specific deaminase, C-terminal BF28_5643 IPR011991 ArsR-like helix-turn-helix domain BF28_5643 IPR001845 HTH ArsR-type DNA-binding domain BF28_5643 IPR036390 Winged helix DNA-binding domain superfamily BF28_5643 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_5644 IPR042047 Cell wall hydrolase SleB, domain 1 BF28_5644 IPR011105 Cell wall hydrolase, SleB BF28_5645 IPR041379 Collagenase ColG, catalytic helper subdomain BF28_5645 IPR013783 Immunoglobulin-like fold BF28_5645 IPR002169 Peptidase M9A/M9B, collagenase, bacterial BF28_5645 IPR022409 PKD/Chitinase domain BF28_5645 IPR035986 PKD domain superfamily BF28_5645 IPR013661 Peptidase M9, collagenase, N-terminal domain BF28_5645 IPR000601 PKD domain BF28_565 IPR022967 RNA-binding domain, S1 BF28_565 IPR011129 Cold shock domain BF28_565 IPR040476 RNase II/RNase R, cold shock domain BF28_565 IPR003029 S1 domain BF28_565 IPR011805 Ribonuclease R BF28_565 IPR012340 Nucleic acid-binding, OB-fold BF28_565 IPR004476 Ribonuclease II/ribonuclease R BF28_565 IPR022966 Ribonuclease II/R, conserved site BF28_565 IPR013223 Ribonuclease B, N-terminal OB domain BF28_565 IPR001900 Ribonuclease II/R BF28_5651 IPR004995 Bacillus/Clostridium Ger spore germination protein BF28_5652 IPR038501 Spore germination GerAC superfamily BF28_5652 IPR008844 Spore germination GerAC BF28_5654 IPR004761 Spore germination GerAB BF28_5655 IPR004761 Spore germination GerAB BF28_5656 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal BF28_5656 IPR036188 FAD/NAD(P)-binding domain superfamily BF28_5656 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal BF28_566 IPR023620 Small protein B BF28_566 IPR000037 SsrA-binding protein BF28_566 IPR020081 SsrA-binding protein, conserved site BF28_5663 IPR023090 UPF0702, alpha/beta domain superfamily BF28_5663 IPR007353 Protein of unknown function DUF421 BF28_5664 IPR016997 Uncharacterised conserved protein UCP032442 BF28_5664 IPR039563 Peptidase C39 single domain protein BF28_5664 IPR039564 Peptidase C39-like BF28_567 IPR001789 Signal transduction response regulator, receiver domain BF28_567 IPR001867 OmpR/PhoB-type DNA-binding domain BF28_567 IPR039420 Transcriptional regulatory protein WalR-like BF28_567 IPR011006 CheY-like superfamily BF28_567 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_567 IPR016032 Signal transduction response regulator, C-terminal effector BF28_5675 IPR010920 LSM domain superfamily BF28_5675 IPR005001 RNA-binding protein Hfq BF28_5676 IPR012337 Ribonuclease H-like superfamily BF28_5676 IPR002559 Transposase, IS4-like BF28_5678 IPR012337 Ribonuclease H-like superfamily BF28_5678 IPR002559 Transposase, IS4-like BF28_5679 IPR012337 Ribonuclease H-like superfamily BF28_5679 IPR002559 Transposase, IS4-like BF28_569 IPR000522 ABC transporter, permease protein, BtuC-like BF28_569 IPR037294 ABC transporter, BtuC-like BF28_5690 IPR011335 Restriction endonuclease type II-like BF28_5690 IPR004612 Holliday junction resolvase RecU BF28_5690 IPR011856 tRNA endonuclease-like domain superfamily BF28_5695 IPR027268 Peptidase M4/M1, CTD superfamily BF28_5695 IPR013856 Peptidase M4 domain BF28_5695 IPR001570 Peptidase M4, C-terminal BF28_5695 IPR023612 Peptidase M4 BF28_5696 IPR001466 Beta-lactamase-related BF28_5696 IPR012338 Beta-lactamase/transpeptidase-like BF28_5697 IPR012338 Beta-lactamase/transpeptidase-like BF28_5697 IPR001466 Beta-lactamase-related BF28_5699 IPR022742 Serine aminopeptidase, S33 BF28_5699 IPR029058 Alpha/Beta hydrolase fold BF28_5699 IPR024981 Domain of unknown function DUF3887 BF28_57 IPR002136 Ribosomal protein L4/L1e BF28_57 IPR013005 50S ribosomal protein uL4 BF28_57 IPR023574 Ribosomal protein L4 domain superfamily BF28_570 IPR037294 ABC transporter, BtuC-like BF28_570 IPR000522 ABC transporter, permease protein, BtuC-like BF28_5702 IPR005279 Dipeptide/tripeptide permease BF28_5702 IPR000109 Proton-dependent oligopeptide transporter family BF28_5702 IPR020846 Major facilitator superfamily domain BF28_5702 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site BF28_5702 IPR036259 MFS transporter superfamily BF28_5704 IPR010095 Transposase IS605, OrfB, C-terminal BF28_5704 IPR001959 Probable transposase, IS891/IS1136/IS1341 BF28_5704 IPR021027 Transposase, putative, helix-turn-helix domain BF28_5705 IPR015424 Pyridoxal phosphate-dependent transferase BF28_5705 IPR036390 Winged helix DNA-binding domain superfamily BF28_5705 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_5705 IPR000524 Transcription regulator HTH, GntR BF28_5705 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BF28_5705 IPR004839 Aminotransferase, class I/classII BF28_5706 IPR000620 EamA domain BF28_5708 IPR008928 Six-hairpin glycosidase superfamily BF28_5708 IPR002037 Glycoside hydrolase, family 8 BF28_5708 IPR012341 Six-hairpin glycosidase-like superfamily BF28_5708 IPR019834 Glycoside hydrolase, family 8, conserved site BF28_571 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_571 IPR003439 ABC transporter-like BF28_571 IPR003593 AAA+ ATPase domain BF28_5714 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel BF28_5714 IPR002509 NodB homology domain BF28_5719 IPR002559 Transposase, IS4-like BF28_5719 IPR012337 Ribonuclease H-like superfamily BF28_5720 IPR002938 FAD-binding domain BF28_5720 IPR036188 FAD/NAD(P)-binding domain superfamily BF28_5721 IPR001647 DNA-binding HTH domain, TetR-type BF28_5721 IPR009057 Homeobox-like domain superfamily BF28_5722 IPR006118 Recombinase, conserved site BF28_5722 IPR006119 Resolvase, N-terminal catalytic domain BF28_5722 IPR009057 Homeobox-like domain superfamily BF28_5722 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily BF28_5722 IPR006120 Resolvase, HTH domain BF28_5723 IPR009057 Homeobox-like domain superfamily BF28_5723 IPR038965 Transposase InsF-like BF28_5723 IPR001584 Integrase, catalytic core BF28_5723 IPR012337 Ribonuclease H-like superfamily BF28_5723 IPR036397 Ribonuclease H superfamily BF28_5723 IPR015378 Transposase-like, Mu, C-terminal BF28_5723 IPR009004 Transposase, Mu, C-terminal BF28_5724 IPR003593 AAA+ ATPase domain BF28_5724 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_5725 IPR002559 Transposase, IS4-like BF28_5725 IPR012337 Ribonuclease H-like superfamily BF28_5726 IPR002513 Tn3 transposase DDE domain BF28_5726 IPR025296 Domain of unknown function DUF4158 BF28_5727 IPR006120 Resolvase, HTH domain BF28_5727 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily BF28_5727 IPR006119 Resolvase, N-terminal catalytic domain BF28_5727 IPR006118 Recombinase, conserved site BF28_5728 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily BF28_5728 IPR041490 HTH-type transcriptional repressor KstR2, C-terminal BF28_5728 IPR001647 DNA-binding HTH domain, TetR-type BF28_5728 IPR009057 Homeobox-like domain superfamily BF28_5729 IPR020846 Major facilitator superfamily domain BF28_5729 IPR011701 Major facilitator superfamily BF28_5729 IPR036259 MFS transporter superfamily BF28_573 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_573 IPR000835 MarR-type HTH domain BF28_573 IPR036390 Winged helix DNA-binding domain superfamily BF28_573 IPR011991 ArsR-like helix-turn-helix domain BF28_5731 IPR003593 AAA+ ATPase domain BF28_5731 IPR025857 MacB-like periplasmic core domain BF28_5731 IPR017911 ABC transporter, macrolide export, ATP-binding domain BF28_5731 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_5731 IPR017871 ABC transporter, conserved site BF28_5731 IPR003439 ABC transporter-like BF28_5731 IPR003838 ABC transporter permease protein domain BF28_5733 IPR002559 Transposase, IS4-like BF28_5733 IPR012337 Ribonuclease H-like superfamily BF28_5744 IPR001584 Integrase, catalytic core BF28_5744 IPR025948 HTH-like domain BF28_5744 IPR036397 Ribonuclease H superfamily BF28_5744 IPR012337 Ribonuclease H-like superfamily BF28_5745 IPR036397 Ribonuclease H superfamily BF28_5745 IPR025948 HTH-like domain BF28_5745 IPR012337 Ribonuclease H-like superfamily BF28_5745 IPR001584 Integrase, catalytic core BF28_5749 IPR038965 Transposase InsF-like BF28_5749 IPR001584 Integrase, catalytic core BF28_5749 IPR012337 Ribonuclease H-like superfamily BF28_5749 IPR036397 Ribonuclease H superfamily BF28_5750 IPR000060 BCCT transporter family BF28_5750 IPR018093 BCCT transporter, conserved site BF28_5753 IPR010095 Transposase IS605, OrfB, C-terminal BF28_5753 IPR021027 Transposase, putative, helix-turn-helix domain BF28_5753 IPR001959 Probable transposase, IS891/IS1136/IS1341 BF28_5754 IPR002559 Transposase, IS4-like BF28_5754 IPR012337 Ribonuclease H-like superfamily BF28_5755 IPR002559 Transposase, IS4-like BF28_5755 IPR012337 Ribonuclease H-like superfamily BF28_5759 IPR023009 Tyrosine recombinase XerC/XerD BF28_5759 IPR011010 DNA breaking-rejoining enzyme, catalytic core BF28_5759 IPR002104 Integrase, catalytic domain BF28_5759 IPR004107 Integrase, SAM-like, N-terminal BF28_5759 IPR010998 Integrase/recombinase, N-terminal BF28_5759 IPR013762 Integrase-like, catalytic domain superfamily BF28_576 IPR020948 Phosphate-starvation-induced PsiE-like BF28_576 IPR009315 Phosphate-starvation-induced PsiE BF28_577 IPR016181 Acyl-CoA N-acyltransferase BF28_577 IPR000182 GNAT domain BF28_5774 IPR003593 AAA+ ATPase domain BF28_5774 IPR011527 ABC transporter type 1, transmembrane domain BF28_5774 IPR039421 Type I protein exporter BF28_5774 IPR003439 ABC transporter-like BF28_5774 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 BF28_5774 IPR005074 Peptidase C39, bacteriocin processing BF28_5774 IPR036640 ABC transporter type 1, transmembrane domain superfamily BF28_5774 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_5775 IPR036249 Thioredoxin-like superfamily BF28_5775 IPR013766 Thioredoxin domain BF28_5776 IPR023380 DsbB-like superfamily BF28_5776 IPR012187 Disulphide bond formation protein BdbC BF28_5776 IPR003752 Disulphide bond formation protein DsbB/BdbC BF28_5777 IPR023670 Tyrosine recombinase XerS BF28_5777 IPR013762 Integrase-like, catalytic domain superfamily BF28_5777 IPR004107 Integrase, SAM-like, N-terminal BF28_5777 IPR010998 Integrase/recombinase, N-terminal BF28_5777 IPR002104 Integrase, catalytic domain BF28_5777 IPR011010 DNA breaking-rejoining enzyme, catalytic core BF28_5779 IPR033479 Double Cache domain 1 BF28_5779 IPR003660 HAMP domain BF28_5779 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain BF28_5779 IPR029151 Periplasmic sensor-like domain superfamily BF28_5786 IPR039286 Exosporium protein C BF28_5795 IPR009057 Homeobox-like domain superfamily BF28_5795 IPR006119 Resolvase, N-terminal catalytic domain BF28_5795 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily BF28_5795 IPR006120 Resolvase, HTH domain BF28_5795 IPR006118 Recombinase, conserved site BF28_58 IPR019927 Ribosomal protein L3, bacterial/organelle-type BF28_58 IPR019926 Ribosomal protein L3, conserved site BF28_58 IPR009000 Translation protein, beta-barrel domain superfamily BF28_58 IPR000597 Ribosomal protein L3 BF28_580 IPR003691 Putative fluoride ion transporter CrcB BF28_5800 IPR000477 Reverse transcriptase domain BF28_581 IPR003691 Putative fluoride ion transporter CrcB BF28_5815 IPR012337 Ribonuclease H-like superfamily BF28_5815 IPR002559 Transposase, IS4-like BF28_5826 IPR010095 Transposase IS605, OrfB, C-terminal BF28_5826 IPR001959 Probable transposase, IS891/IS1136/IS1341 BF28_5826 IPR021027 Transposase, putative, helix-turn-helix domain BF28_5827 IPR013988 PhnA protein, C-terminal BF28_5827 IPR013987 PhnA protein, N-terminal BF28_5827 IPR004624 PhnA protein BF28_5828 IPR036736 ACP-like superfamily BF28_5828 IPR009081 Phosphopantetheine binding ACP domain BF28_5828 IPR003230 D-alanyl carrier protein BF28_583 IPR029151 Periplasmic sensor-like domain superfamily BF28_583 IPR033463 Single cache domain 3 BF28_583 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain BF28_583 IPR003660 HAMP domain BF28_583 IPR004090 Chemotaxis methyl-accepting receptor BF28_5830 IPR002645 STAS domain BF28_5830 IPR011547 SLC26A/SulP transporter domain BF28_5830 IPR001902 SLC26A/SulP transporter BF28_5830 IPR036513 STAS domain superfamily BF28_5832 IPR011991 ArsR-like helix-turn-helix domain BF28_5832 IPR001845 HTH ArsR-type DNA-binding domain BF28_5832 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_5832 IPR036390 Winged helix DNA-binding domain superfamily BF28_5835 IPR001173 Glycosyltransferase 2-like BF28_5835 IPR029044 Nucleotide-diphospho-sugar transferases BF28_5838 IPR012337 Ribonuclease H-like superfamily BF28_5838 IPR002559 Transposase, IS4-like BF28_5839 IPR012337 Ribonuclease H-like superfamily BF28_5839 IPR002559 Transposase, IS4-like BF28_5840 IPR002559 Transposase, IS4-like BF28_5840 IPR012337 Ribonuclease H-like superfamily BF28_5841 IPR012337 Ribonuclease H-like superfamily BF28_5841 IPR002559 Transposase, IS4-like BF28_5843 IPR001525 C-5 cytosine methyltransferase BF28_5843 IPR001387 Cro/C1-type helix-turn-helix domain BF28_5843 IPR018117 DNA methylase, C-5 cytosine-specific, active site BF28_5843 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BF28_5843 IPR010982 Lambda repressor-like, DNA-binding domain superfamily BF28_5843 IPR031303 DNA methylase, C-5 cytosine-specific, conserved site BF28_585 IPR006094 FAD linked oxidase, N-terminal BF28_585 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase BF28_585 IPR016167 FAD-binding, type PCMH, subdomain 1 BF28_585 IPR036318 FAD-binding, type PCMH-like superfamily BF28_585 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal BF28_585 IPR016169 FAD-binding, type PCMH, subdomain 2 BF28_585 IPR016166 FAD-binding domain, PCMH-type BF28_585 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily BF28_5851 IPR012337 Ribonuclease H-like superfamily BF28_5851 IPR002559 Transposase, IS4-like BF28_5852 IPR002559 Transposase, IS4-like BF28_5852 IPR012337 Ribonuclease H-like superfamily BF28_5853 IPR016039 Thiolase-like BF28_5853 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 BF28_5853 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal BF28_5853 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BF28_5854 IPR029069 HotDog domain superfamily BF28_5854 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ BF28_5854 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ BF28_5855 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY BF28_5857 IPR003719 Phenazine biosynthesis PhzF protein BF28_586 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site BF28_586 IPR002305 Aminoacyl-tRNA synthetase, class Ic BF28_586 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BF28_586 IPR002942 RNA-binding S4 domain BF28_586 IPR036986 RNA-binding S4 domain superfamily BF28_586 IPR002307 Tyrosine-tRNA ligase BF28_586 IPR024088 Tyrosine-tRNA ligase, bacterial-type BF28_586 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 BF28_5860 IPR002104 Integrase, catalytic domain BF28_5860 IPR013762 Integrase-like, catalytic domain superfamily BF28_5860 IPR011010 DNA breaking-rejoining enzyme, catalytic core BF28_5862 IPR012337 Ribonuclease H-like superfamily BF28_5862 IPR002559 Transposase, IS4-like BF28_5864 IPR007353 Protein of unknown function DUF421 BF28_5864 IPR023090 UPF0702, alpha/beta domain superfamily BF28_5866 IPR014204 Sporulation stage V, protein AE BF28_5866 IPR005562 SpoVA BF28_5868 IPR001959 Probable transposase, IS891/IS1136/IS1341 BF28_5868 IPR010095 Transposase IS605, OrfB, C-terminal BF28_5868 IPR021027 Transposase, putative, helix-turn-helix domain BF28_587 IPR023753 FAD/NAD(P)-binding domain BF28_587 IPR036188 FAD/NAD(P)-binding domain superfamily BF28_5871 IPR021027 Transposase, putative, helix-turn-helix domain BF28_5871 IPR001959 Probable transposase, IS891/IS1136/IS1341 BF28_5871 IPR010095 Transposase IS605, OrfB, C-terminal BF28_5874 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase BF28_5874 IPR033879 Undecaprenyl-diphosphatase BF28_5874 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily BF28_588 IPR012440 Protein of unknown function DUF1641 BF28_5881 IPR009695 Diacylglycerol glucosyltransferase, N-terminal BF28_5882 IPR001959 Probable transposase, IS891/IS1136/IS1341 BF28_5882 IPR021027 Transposase, putative, helix-turn-helix domain BF28_5882 IPR010095 Transposase IS605, OrfB, C-terminal BF28_5883 IPR029052 Metallo-dependent phosphatase-like BF28_5883 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type BF28_5889 IPR023576 UbiE/COQ5 methyltransferase, conserved site BF28_5889 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BF28_5889 IPR004033 UbiE/COQ5 methyltransferase BF28_589 IPR002577 Helix-turn-helix, HxlR type BF28_589 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_589 IPR036390 Winged helix DNA-binding domain superfamily BF28_5892 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding BF28_5892 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal BF28_5892 IPR036291 NAD(P)-binding domain superfamily BF28_5892 IPR026578 L-carnitine dehydrogenase BF28_5892 IPR013328 6-phosphogluconate dehydrogenase, domain 2 BF28_5892 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily BF28_5893 IPR008567 3-keto-5-aminohexanoate cleavage enzyme BF28_5893 IPR013785 Aldolase-type TIM barrel BF28_5896 IPR013856 Peptidase M4 domain BF28_5896 IPR001570 Peptidase M4, C-terminal BF28_5896 IPR027268 Peptidase M4/M1, CTD superfamily BF28_5896 IPR025711 PepSY domain BF28_5896 IPR011096 FTP domain BF28_5896 IPR023612 Peptidase M4 BF28_5897 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain BF28_5897 IPR004090 Chemotaxis methyl-accepting receptor BF28_5897 IPR003660 HAMP domain BF28_5897 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain BF28_59 IPR036838 Ribosomal protein S10 domain superfamily BF28_59 IPR001848 Ribosomal protein S10 BF28_59 IPR018268 Ribosomal protein S10, conserved site BF28_59 IPR027486 Ribosomal protein S10 domain BF28_590 IPR011701 Major facilitator superfamily BF28_590 IPR036259 MFS transporter superfamily BF28_590 IPR020846 Major facilitator superfamily domain BF28_5900 IPR004090 Chemotaxis methyl-accepting receptor BF28_5900 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain BF28_5900 IPR001610 PAC motif BF28_5900 IPR000014 PAS domain BF28_5900 IPR000700 PAS-associated, C-terminal BF28_5900 IPR035965 PAS domain superfamily BF28_5900 IPR013655 PAS fold-3 BF28_5901 IPR025711 PepSY domain BF28_5901 IPR027268 Peptidase M4/M1, CTD superfamily BF28_5901 IPR001570 Peptidase M4, C-terminal BF28_5901 IPR023612 Peptidase M4 BF28_5901 IPR011096 FTP domain BF28_5901 IPR013856 Peptidase M4 domain BF28_5908 IPR002347 Short-chain dehydrogenase/reductase SDR BF28_5908 IPR020904 Short-chain dehydrogenase/reductase, conserved site BF28_5908 IPR036291 NAD(P)-binding domain superfamily BF28_5909 IPR010651 Sugar transport protein BF28_591 IPR018170 Aldo/keto reductase, conserved site BF28_591 IPR020471 Aldo/keto reductase BF28_591 IPR023210 NADP-dependent oxidoreductase domain BF28_591 IPR036812 NADP-dependent oxidoreductase domain superfamily BF28_5910 IPR029058 Alpha/Beta hydrolase fold BF28_5910 IPR002925 Dienelactone hydrolase BF28_5911 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BF28_5911 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain BF28_5911 IPR037523 Vicinal oxygen chelate (VOC) domain BF28_5912 IPR002563 Flavin reductase like domain BF28_5912 IPR012349 FMN-binding split barrel BF28_5913 IPR037523 Vicinal oxygen chelate (VOC) domain BF28_5913 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain BF28_5913 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BF28_5914 IPR000835 MarR-type HTH domain BF28_5914 IPR023187 Transcriptional regulator MarR-type, conserved site BF28_5914 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_5914 IPR036390 Winged helix DNA-binding domain superfamily BF28_5916 IPR036259 MFS transporter superfamily BF28_5916 IPR011701 Major facilitator superfamily BF28_5916 IPR004638 Drug resistance transporter EmrB-like BF28_5916 IPR020846 Major facilitator superfamily domain BF28_5918 IPR002559 Transposase, IS4-like BF28_5918 IPR012337 Ribonuclease H-like superfamily BF28_5919 IPR013149 Alcohol dehydrogenase, C-terminal BF28_5919 IPR036291 NAD(P)-binding domain superfamily BF28_5919 IPR011032 GroES-like superfamily BF28_5919 IPR020843 Polyketide synthase, enoylreductase domain BF28_5919 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site BF28_5919 IPR013154 Alcohol dehydrogenase, N-terminal BF28_5920 IPR000766 Galactose-1-phosphate uridyl transferase, class II BF28_5920 IPR023425 Galactose-1-phosphate uridyl transferase, class II, conserved site BF28_5920 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal BF28_5920 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal BF28_5921 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BF28_5921 IPR000705 Galactokinase BF28_5921 IPR006206 Mevalonate/galactokinase BF28_5921 IPR006203 GHMP kinase, ATP-binding, conserved site BF28_5921 IPR006204 GHMP kinase N-terminal domain BF28_5921 IPR036554 GHMP kinase, C-terminal domain superfamily BF28_5921 IPR013750 GHMP kinase, C-terminal domain BF28_5921 IPR019741 Galactokinase, conserved site BF28_5921 IPR022963 Galactokinase, bacterial BF28_5921 IPR020568 Ribosomal protein S5 domain 2-type fold BF28_5921 IPR019539 Galactokinase galactose-binding domain BF28_5922 IPR015443 Aldose 1-epimerase BF28_5922 IPR014718 Glycoside hydrolase-type carbohydrate-binding BF28_5922 IPR011013 Galactose mutarotase-like domain superfamily BF28_5922 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase BF28_5922 IPR013458 Aldose 1-epimerase, bacterial BF28_5922 IPR018052 Aldose 1-epimerase, conserved site BF28_5923 IPR020449 Transcription regulator HTH, AraC- type BF28_5923 IPR003313 AraC-type arabinose-binding/dimerisation domain BF28_5923 IPR018062 HTH domain AraC-type, conserved site BF28_5923 IPR018060 DNA binding HTH domain, AraC-type BF28_5923 IPR037923 Transcription regulator HTH-like BF28_5923 IPR009057 Homeobox-like domain superfamily BF28_5924 IPR011071 Polysaccharide lyase family 8-like, C-terminal BF28_5924 IPR012970 Polysaccharide lyase 8, N-terminal alpha-helical BF28_5924 IPR004103 Polysaccharide lyase family 8, C-terminal BF28_5924 IPR003159 Polysaccharide lyase family 8, central domain BF28_5924 IPR038970 Polysaccharide lyase 8 BF28_5924 IPR014718 Glycoside hydrolase-type carbohydrate-binding BF28_5924 IPR019931 LPXTG cell wall anchor domain BF28_5924 IPR008929 Chondroitin AC/alginate lyase BF28_5924 IPR023295 Hyaluronate lyase, beta-sheet domain superfamily BF28_5924 IPR014756 Immunoglobulin E-set BF28_5924 IPR008979 Galactose-binding-like domain superfamily BF28_5924 IPR011013 Galactose mutarotase-like domain superfamily BF28_5925 IPR017853 Glycoside hydrolase superfamily BF28_5925 IPR019801 Glycoside hydrolase, family 35, conserved site BF28_5925 IPR008979 Galactose-binding-like domain superfamily BF28_5925 IPR026283 Beta-galactosidase 1-like BF28_5925 IPR001944 Glycoside hydrolase, family 35 BF28_5925 IPR031330 Glycoside hydrolase 35, catalytic domain BF28_5926 IPR008928 Six-hairpin glycosidase superfamily BF28_5926 IPR012341 Six-hairpin glycosidase-like superfamily BF28_5926 IPR010905 Glycosyl hydrolase, family 88 BF28_5927 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily BF28_5927 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup BF28_5927 IPR013789 Phosphotransferase system, mannose family IIA component BF28_5927 IPR033887 PTS system mannose/sorbose specific IIA subunit BF28_5927 IPR004720 Phosphotransferase system, sorbose subfamily IIB component BF28_5927 IPR004701 Phosphotransferase system, mannose-type IIA component BF28_5927 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily BF28_5928 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component BF28_5929 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit BF28_5931 IPR036291 NAD(P)-binding domain superfamily BF28_5931 IPR020904 Short-chain dehydrogenase/reductase, conserved site BF28_5931 IPR002347 Short-chain dehydrogenase/reductase SDR BF28_5932 IPR027449 5-keto-4-deoxyuronate isomerase, N-terminal BF28_5932 IPR021120 KduI/IolB isomerase BF28_5932 IPR011051 RmlC-like cupin domain superfamily BF28_5932 IPR007045 5-keto 4-deoxyuronate isomerase BF28_5932 IPR014710 RmlC-like jelly roll fold BF28_5933 IPR030830 5-Dehydro-2-deoxygluconokinase BF28_5933 IPR029056 Ribokinase-like BF28_5933 IPR022841 5-dehydro-2-deoxygluconokinase, Firmicutes BF28_5933 IPR011611 Carbohydrate kinase PfkB BF28_5933 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site BF28_5933 IPR023314 5-Dehydro-2-deoxygluconokinase-like superfamily BF28_5935 IPR036390 Winged helix DNA-binding domain superfamily BF28_5935 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_5935 IPR014757 Transcription regulator IclR, C-terminal BF28_5935 IPR029016 GAF-like domain superfamily BF28_5935 IPR005471 Transcription regulator IclR, N-terminal BF28_5937 IPR007404 LexA-binding, inner membrane-associated putative hydrolase BF28_5939 IPR011990 Tetratricopeptide-like helical domain superfamily BF28_5939 IPR040702 Response regulator aspartate phosphatase, N-terminal BF28_594 IPR016040 NAD(P)-binding domain BF28_594 IPR036291 NAD(P)-binding domain superfamily BF28_5940 IPR021027 Transposase, putative, helix-turn-helix domain BF28_5940 IPR010095 Transposase IS605, OrfB, C-terminal BF28_5940 IPR001959 Probable transposase, IS891/IS1136/IS1341 BF28_5943 IPR010499 Bacterial transcription activator, effector binding BF28_5943 IPR009061 Putative DNA-binding domain superfamily BF28_5943 IPR000551 MerR-type HTH domain BF28_5943 IPR011256 Regulatory factor, effector binding domain superfamily BF28_5943 IPR029442 GyrI-like small molecule binding domain BF28_5946 IPR025948 HTH-like domain BF28_5946 IPR038965 Transposase InsF-like BF28_5946 IPR001584 Integrase, catalytic core BF28_5946 IPR012337 Ribonuclease H-like superfamily BF28_5946 IPR036397 Ribonuclease H superfamily BF28_595 IPR001463 Sodium:alanine symporter BF28_5950 IPR025669 AAA domain BF28_5950 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_5955 IPR025052 Domain of unknown function DUF3967 BF28_5955 IPR009061 Putative DNA-binding domain superfamily BF28_5955 IPR000551 MerR-type HTH domain BF28_596 IPR001463 Sodium:alanine symporter BF28_5963 IPR002513 Tn3 transposase DDE domain BF28_5963 IPR025296 Domain of unknown function DUF4158 BF28_5969 IPR011010 DNA breaking-rejoining enzyme, catalytic core BF28_5969 IPR013762 Integrase-like, catalytic domain superfamily BF28_5969 IPR002104 Integrase, catalytic domain BF28_597 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial BF28_597 IPR011657 Concentrative nucleoside transporter C-terminal domain BF28_597 IPR002668 Concentrative nucleoside transporter N-terminal domain BF28_597 IPR008276 Concentrative nucleoside transporter BF28_5973 IPR037914 SpoVT-AbrB domain superfamily BF28_5973 IPR007159 SpoVT-AbrB domain BF28_5973 IPR040678 AbrB, C-terminal BF28_5976 IPR012337 Ribonuclease H-like superfamily BF28_5976 IPR002559 Transposase, IS4-like BF28_5979 IPR038965 Transposase InsF-like BF28_5979 IPR001584 Integrase, catalytic core BF28_5979 IPR025948 HTH-like domain BF28_5979 IPR036397 Ribonuclease H superfamily BF28_5979 IPR012337 Ribonuclease H-like superfamily BF28_598 IPR008276 Concentrative nucleoside transporter BF28_598 IPR011657 Concentrative nucleoside transporter C-terminal domain BF28_598 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial BF28_598 IPR002668 Concentrative nucleoside transporter N-terminal domain BF28_5981 IPR036775 DNA polymerase, Y-family, little finger domain superfamily BF28_5981 IPR024728 DNA polymerase type-Y, HhH motif BF28_5981 IPR001126 UmuC domain BF28_5981 IPR017961 DNA polymerase, Y-family, little finger domain BF28_5982 IPR002559 Transposase, IS4-like BF28_5982 IPR012337 Ribonuclease H-like superfamily BF28_5984 IPR002781 Transmembrane protein TauE-like BF28_5986 IPR024542 Domain of unknown function DUF3880 BF28_5989 IPR006127 Periplasmic solute binding protein, ZnuA-like BF28_5989 IPR006129 Adhesin B BF28_5989 IPR006128 Adhesion lipoprotein BF28_5990 IPR001626 ABC transporter, TroCD-like BF28_5990 IPR037294 ABC transporter, BtuC-like BF28_5991 IPR003593 AAA+ ATPase domain BF28_5991 IPR003439 ABC transporter-like BF28_5991 IPR017871 ABC transporter, conserved site BF28_5991 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_5992 IPR006120 Resolvase, HTH domain BF28_5992 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily BF28_5992 IPR009057 Homeobox-like domain superfamily BF28_5992 IPR006119 Resolvase, N-terminal catalytic domain BF28_5992 IPR006118 Recombinase, conserved site BF28_60 IPR004161 Translation elongation factor EFTu-like, domain 2 BF28_60 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain BF28_60 IPR005225 Small GTP-binding protein domain BF28_60 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal BF28_60 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle BF28_60 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal BF28_60 IPR033720 Elongation factor Tu, domain 2 BF28_60 IPR031157 Tr-type G domain, conserved site BF28_60 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_60 IPR009000 Translation protein, beta-barrel domain superfamily BF28_60 IPR000795 Transcription factor, GTP-binding domain BF28_600 IPR009040 Ferritin-like diiron domain BF28_600 IPR041719 Ferritin, prokaryotic-type BF28_600 IPR008331 Ferritin/DPS protein domain BF28_600 IPR009078 Ferritin-like superfamily BF28_600 IPR012347 Ferritin-like BF28_600 IPR001519 Ferritin BF28_6002 IPR006118 Recombinase, conserved site BF28_6002 IPR006119 Resolvase, N-terminal catalytic domain BF28_6002 IPR006120 Resolvase, HTH domain BF28_6002 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily BF28_6017 IPR036390 Winged helix DNA-binding domain superfamily BF28_6017 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_6017 IPR000835 MarR-type HTH domain BF28_6018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily BF28_6018 IPR001387 Cro/C1-type helix-turn-helix domain BF28_6019 IPR001387 Cro/C1-type helix-turn-helix domain BF28_6019 IPR010982 Lambda repressor-like, DNA-binding domain superfamily BF28_602 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG BF28_602 IPR031100 LOG family BF28_6020 IPR025052 Domain of unknown function DUF3967 BF28_6020 IPR009061 Putative DNA-binding domain superfamily BF28_6020 IPR000551 MerR-type HTH domain BF28_6022 IPR002104 Integrase, catalytic domain BF28_6022 IPR013762 Integrase-like, catalytic domain superfamily BF28_6022 IPR011010 DNA breaking-rejoining enzyme, catalytic core BF28_6026 IPR001668 Plasmid recombination enzyme BF28_6033 IPR001668 Plasmid recombination enzyme BF28_6039 IPR001668 Plasmid recombination enzyme BF28_605 IPR012347 Ferritin-like BF28_605 IPR023188 DNA-binding protein Dps, conserved site BF28_605 IPR009078 Ferritin-like superfamily BF28_605 IPR002177 DNA-binding protein Dps BF28_605 IPR008331 Ferritin/DPS protein domain BF28_606 IPR001463 Sodium:alanine symporter BF28_607 IPR026278 Potassium/proton antiporter subunit KhtT BF28_607 IPR006037 Regulator of K+ conductance, C-terminal BF28_607 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily BF28_608 IPR038770 Sodium/solute symporter superfamily BF28_608 IPR006153 Cation/H+ exchanger BF28_61 IPR041095 Elongation Factor G, domain II BF28_61 IPR009022 Elongation factor G, domain III BF28_61 IPR035647 EF-G domain III/V-like BF28_61 IPR035649 EFG, domain V BF28_61 IPR000640 Elongation factor EFG, domain V-like BF28_61 IPR004161 Translation elongation factor EFTu-like, domain 2 BF28_61 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_61 IPR031157 Tr-type G domain, conserved site BF28_61 IPR004540 Translation elongation factor EFG/EF2 BF28_61 IPR009000 Translation protein, beta-barrel domain superfamily BF28_61 IPR020568 Ribosomal protein S5 domain 2-type fold BF28_61 IPR005517 Translation elongation factor EFG/EF2, domain IV BF28_61 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BF28_61 IPR005225 Small GTP-binding protein domain BF28_61 IPR000795 Transcription factor, GTP-binding domain BF28_611 IPR011051 RmlC-like cupin domain superfamily BF28_611 IPR012093 Pirin BF28_611 IPR003829 Pirin, N-terminal domain BF28_611 IPR041602 Quercetin 2,3-dioxygenase, C-terminal cupin domain BF28_611 IPR014710 RmlC-like jelly roll fold BF28_612 IPR023612 Peptidase M4 BF28_612 IPR001570 Peptidase M4, C-terminal BF28_612 IPR013856 Peptidase M4 domain BF28_612 IPR011096 FTP domain BF28_612 IPR027268 Peptidase M4/M1, CTD superfamily BF28_612 IPR025711 PepSY domain BF28_613 IPR034904 Fe-S cluster assembly domain superfamily BF28_613 IPR002744 MIP18 family-like BF28_614 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain BF28_614 IPR003660 HAMP domain BF28_614 IPR029151 Periplasmic sensor-like domain superfamily BF28_614 IPR033479 Double Cache domain 1 BF28_615 IPR033479 Double Cache domain 1 BF28_615 IPR000727 Target SNARE coiled-coil homology domain BF28_615 IPR003660 HAMP domain BF28_615 IPR029151 Periplasmic sensor-like domain superfamily BF28_615 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain BF28_615 IPR004090 Chemotaxis methyl-accepting receptor BF28_619 IPR031967 PhoR, single Cache-like domain BF28_619 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BF28_619 IPR003594 Histidine kinase/HSP90-like ATPase BF28_619 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BF28_619 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BF28_619 IPR035965 PAS domain superfamily BF28_619 IPR005467 Histidine kinase domain BF28_619 IPR000014 PAS domain BF28_619 IPR013767 PAS fold BF28_619 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BF28_62 IPR005717 Ribosomal protein S7, bacterial/organellar-type BF28_62 IPR020606 Ribosomal protein S7, conserved site BF28_62 IPR000235 Ribosomal protein S5/S7 BF28_62 IPR023798 Ribosomal protein S7 domain BF28_62 IPR036823 Ribosomal protein S7 domain superfamily BF28_620 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_620 IPR039420 Transcriptional regulatory protein WalR-like BF28_620 IPR001789 Signal transduction response regulator, receiver domain BF28_620 IPR011006 CheY-like superfamily BF28_620 IPR001867 OmpR/PhoB-type DNA-binding domain BF28_620 IPR016032 Signal transduction response regulator, C-terminal effector BF28_621 IPR038063 L,D-transpeptidase catalytic domain-like BF28_621 IPR041597 L,D-transpeptidase C-terminal domain BF28_621 IPR005490 L,D-transpeptidase catalytic domain BF28_623 IPR032816 SNARE associated Golgi protein BF28_629 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_629 IPR003593 AAA+ ATPase domain BF28_629 IPR003439 ABC transporter-like BF28_629 IPR017871 ABC transporter, conserved site BF28_63 IPR006032 Ribosomal protein S12/S23 BF28_63 IPR005679 Ribosomal protein S12, bacterial-type BF28_63 IPR012340 Nucleic acid-binding, OB-fold BF28_631 IPR032688 ABC-2 family transporter protein BF28_632 IPR011006 CheY-like superfamily BF28_632 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_632 IPR039420 Transcriptional regulatory protein WalR-like BF28_632 IPR001789 Signal transduction response regulator, receiver domain BF28_632 IPR001867 OmpR/PhoB-type DNA-binding domain BF28_632 IPR016032 Signal transduction response regulator, C-terminal effector BF28_633 IPR003594 Histidine kinase/HSP90-like ATPase BF28_633 IPR001610 PAC motif BF28_633 IPR035965 PAS domain superfamily BF28_633 IPR003660 HAMP domain BF28_633 IPR000700 PAS-associated, C-terminal BF28_633 IPR000014 PAS domain BF28_633 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BF28_633 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BF28_633 IPR005467 Histidine kinase domain BF28_633 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BF28_633 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BF28_636 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal BF28_636 IPR019264 Domain of unknown function DUF2179 BF28_636 IPR003740 Uncharacterised membrane protein YitT BF28_638 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 BF28_638 IPR028055 Membrane insertase YidC/Oxa1, C-terminal BF28_638 IPR023060 Membrane insertase YidC/YidC1/YidC2, Firmicutes BF28_64 IPR029064 50S ribosomal protein L30e-like BF28_64 IPR023460 Ribosomal protein L7Ae, putative BF28_64 IPR004038 Ribosomal protein L7Ae/L30e/S12e/Gadd45 BF28_64 IPR000948 Ribosomal protein L7Ae, prokaryotes BF28_641 IPR002293 Amino acid/polyamine transporter I BF28_642 IPR036259 MFS transporter superfamily BF28_642 IPR020846 Major facilitator superfamily domain BF28_642 IPR011701 Major facilitator superfamily BF28_646 IPR003660 HAMP domain BF28_646 IPR029151 Periplasmic sensor-like domain superfamily BF28_646 IPR033479 Double Cache domain 1 BF28_646 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain BF28_647 IPR002767 Thiamine-binding protein BF28_647 IPR029756 MTH1187/YkoF-like BF28_648 IPR020393 Uncharacterised protein family YusU BF28_649 IPR029041 FAD-linked oxidoreductase-like BF28_649 IPR002872 Proline dehydrogenase domain BF28_649 IPR008219 Proline dehydrogenase, bacteria and archaea BF28_649 IPR015659 Proline oxidase family BF28_65 IPR007083 RNA polymerase Rpb1, domain 4 BF28_65 IPR012754 DNA-directed RNA polymerase, subunit beta-prime BF28_65 IPR042102 RNA polymerase Rpb1, domain 3 superfamily BF28_65 IPR006592 RNA polymerase, N-terminal BF28_65 IPR038120 RNA polymerase Rpb1, funnel domain superfamily BF28_65 IPR007081 RNA polymerase Rpb1, domain 5 BF28_65 IPR007080 RNA polymerase Rpb1, domain 1 BF28_65 IPR000722 RNA polymerase, alpha subunit BF28_65 IPR007066 RNA polymerase Rpb1, domain 3 BF28_650 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal BF28_650 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal BF28_650 IPR012338 Beta-lactamase/transpeptidase-like BF28_650 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A BF28_651 IPR025625 YuzL-like protein BF28_652 IPR029045 ClpP/crotonase-like domain superfamily BF28_652 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding BF28_652 IPR036291 NAD(P)-binding domain superfamily BF28_652 IPR001753 Enoyl-CoA hydratase/isomerase BF28_652 IPR013328 6-phosphogluconate dehydrogenase, domain 2 BF28_652 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily BF28_652 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal BF28_653 IPR020615 Thiolase, acyl-enzyme intermediate active site BF28_653 IPR002155 Thiolase BF28_653 IPR020610 Thiolase, active site BF28_653 IPR020617 Thiolase, C-terminal BF28_653 IPR020616 Thiolase, N-terminal BF28_653 IPR016039 Thiolase-like BF28_653 IPR020613 Thiolase, conserved site BF28_654 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal BF28_654 IPR006089 Acyl-CoA dehydrogenase, conserved site BF28_654 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily BF28_654 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain BF28_654 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal BF28_654 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily BF28_654 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal BF28_655 IPR001279 Metallo-beta-lactamase BF28_655 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BF28_656 IPR001647 DNA-binding HTH domain, TetR-type BF28_656 IPR009057 Homeobox-like domain superfamily BF28_656 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily BF28_656 IPR025996 Tetracyclin repressor-like, C-terminal domain (WHG) BF28_657 IPR010981 SinR repressor/SinI anti-repressor, dimerisation domain BF28_657 IPR001387 Cro/C1-type helix-turn-helix domain BF28_657 IPR036281 SinR repressor/SinI anti-repressor, dimerisation domain superfamily BF28_657 IPR010982 Lambda repressor-like, DNA-binding domain superfamily BF28_66 IPR007642 RNA polymerase Rpb2, domain 2 BF28_66 IPR037034 RNA polymerase Rpb2, domain 2 superfamily BF28_66 IPR007645 RNA polymerase Rpb2, domain 3 BF28_66 IPR042107 DNA-directed RNA polymerase, beta subunit, external 1 domain superfamily BF28_66 IPR007641 RNA polymerase Rpb2, domain 7 BF28_66 IPR014724 RNA polymerase Rpb2, OB-fold BF28_66 IPR007121 RNA polymerase, beta subunit, conserved site BF28_66 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain BF28_66 IPR015712 DNA-directed RNA polymerase, subunit 2 BF28_66 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain BF28_66 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily BF28_66 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type BF28_66 IPR007644 RNA polymerase, beta subunit, protrusion BF28_662 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal BF28_662 IPR001236 Lactate/malate dehydrogenase, N-terminal BF28_662 IPR036291 NAD(P)-binding domain superfamily BF28_662 IPR018177 L-lactate dehydrogenase, active site BF28_662 IPR011304 L-lactate dehydrogenase BF28_662 IPR022383 Lactate/malate dehydrogenase, C-terminal BF28_662 IPR001557 L-lactate/malate dehydrogenase BF28_668 IPR006660 Arsenate reductase-like BF28_668 IPR036249 Thioredoxin-like superfamily BF28_668 IPR006504 Transcriptional regulator Spx/MgsR BF28_669 IPR011053 Single hybrid motif BF28_669 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site BF28_669 IPR000089 Biotin/lipoyl attachment BF28_669 IPR017453 Glycine cleavage system H-protein, subgroup BF28_669 IPR002930 Glycine cleavage system H-protein BF28_669 IPR033753 Glycine cleavage system H-protein/Simiate BF28_67 IPR007848 Methyltransferase small domain BF28_67 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BF28_670 IPR034141 Ribonuclease M5-like, TOPRIM domain BF28_670 IPR006171 TOPRIM domain BF28_671 IPR013766 Thioredoxin domain BF28_671 IPR036249 Thioredoxin-like superfamily BF28_673 IPR003593 AAA+ ATPase domain BF28_673 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_673 IPR018449 NIL domain BF28_673 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain BF28_673 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal BF28_673 IPR017871 ABC transporter, conserved site BF28_673 IPR003439 ABC transporter-like BF28_674 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BF28_674 IPR035906 MetI-like superfamily BF28_675 IPR004872 Lipoprotein NlpA family BF28_676 IPR004872 Lipoprotein NlpA family BF28_677 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_677 IPR003593 AAA+ ATPase domain BF28_677 IPR003439 ABC transporter-like BF28_677 IPR010230 FeS cluster assembly SUF system, ATPase SufC BF28_677 IPR017871 ABC transporter, conserved site BF28_678 IPR000825 SUF system FeS cluster assembly, SufBD BF28_678 IPR037284 SUF system FeS cluster assembly, SufBD superfamily BF28_678 IPR011542 SUF system FeS cluster assembly, SufD BF28_679 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site BF28_679 IPR016454 Cysteine desulfurase BF28_679 IPR015424 Pyridoxal phosphate-dependent transferase BF28_679 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BF28_679 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BF28_679 IPR000192 Aminotransferase class V domain BF28_679 IPR010970 Cysteine desulfurase, SufS BF28_68 IPR000206 Ribosomal protein L7/L12 BF28_68 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like BF28_68 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily BF28_68 IPR013823 Ribosomal protein L7/L12, C-terminal BF28_68 IPR008932 Ribosomal protein L7/L12, oligomerisation BF28_680 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal BF28_681 IPR000825 SUF system FeS cluster assembly, SufBD BF28_681 IPR010231 SUF system FeS cluster assembly, SufB BF28_681 IPR037284 SUF system FeS cluster assembly, SufBD superfamily BF28_682 IPR036907 5'-Nucleotidase, C-terminal domain superfamily BF28_682 IPR006179 5'-Nucleotidase/apyrase BF28_682 IPR029052 Metallo-dependent phosphatase-like BF28_682 IPR011240 Phosphoesterase-related protein YunD BF28_682 IPR008334 5'-Nucleotidase, C-terminal BF28_683 IPR036493 Hypothetical protein YunC superfamily BF28_683 IPR014931 Protein of unknown function DUF1805 BF28_685 IPR011055 Duplicated hybrid motif BF28_685 IPR016047 Peptidase M23 BF28_686 IPR013785 Aldolase-type TIM barrel BF28_686 IPR007197 Radical SAM BF28_686 IPR003698 Lipoyl synthase BF28_686 IPR006638 Elp3/MiaB/NifB BF28_686 IPR031691 Lipoyl synthase, N-terminal BF28_69 IPR001790 Ribosomal protein L10P BF28_69 IPR002363 Ribosomal protein L10, eubacterial, conserved site BF28_69 IPR022973 Ribosomal protein L10 BF28_690 IPR011397 Intramembrane metalloprotease YhfC BF28_691 IPR009061 Putative DNA-binding domain superfamily BF28_691 IPR012925 TipAS antibiotic-recognition domain BF28_691 IPR036244 TipA-like multidrug resistance regulator, antibiotic-recognition domain BF28_691 IPR000551 MerR-type HTH domain BF28_692 IPR019076 Sporulation lipoprotein YhcN/YlaJ-like BF28_693 IPR009370 Protein of unknown function DUF1027 BF28_693 IPR038141 YutD-like superfamily BF28_696 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase BF28_697 IPR008201 Protein of unknown function DUF86 BF28_697 IPR037038 Bsu32300-like superfamily BF28_699 IPR006357 HAD-superfamily hydrolase, subfamily IIA BF28_699 IPR036412 HAD-like superfamily BF28_699 IPR023214 HAD superfamily BF28_699 IPR006354 HAD-superfamily hydrolase, subfamily IIA, hypothetical 1 BF28_70 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein BF28_70 IPR023673 Ribosomal protein L1, conserved site BF28_70 IPR002143 Ribosomal protein L1 BF28_70 IPR005878 Ribosomal protein L1, bacterial-type BF28_70 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich BF28_70 IPR023674 Ribosomal protein L1-like BF28_701 IPR029039 Flavoprotein-like superfamily BF28_701 IPR003680 Flavodoxin-like fold BF28_703 IPR036681 PgpA-like superfamily BF28_703 IPR026038 Putative phosphatidylglycerophosphatase BF28_703 IPR007686 YutG/PgpA domain BF28_704 IPR011009 Protein kinase-like domain superfamily BF28_704 IPR014254 Spore coat protein YutH BF28_706 IPR034904 Fe-S cluster assembly domain superfamily BF28_706 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal BF28_707 IPR036249 Thioredoxin-like superfamily BF28_707 IPR038218 YuzD-like superfamily BF28_707 IPR009190 Protein of unknown function DUF1462 BF28_71 IPR000911 Ribosomal protein L11/L12 BF28_71 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily BF28_71 IPR006519 Ribosomal protein L11, bacterial-type BF28_71 IPR020783 Ribosomal protein L11, C-terminal BF28_71 IPR036769 Ribosomal protein L11, C-terminal domain superfamily BF28_71 IPR020785 Ribosomal protein L11, conserved site BF28_71 IPR020784 Ribosomal protein L11, N-terminal BF28_710 IPR013988 PhnA protein, C-terminal BF28_710 IPR004624 PhnA protein BF28_710 IPR013987 PhnA protein, N-terminal BF28_711 IPR005226 UPF0014 family BF28_712 IPR005897 Peptidase C39, ABC-type bacteriocin transporter BF28_712 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_712 IPR003593 AAA+ ATPase domain BF28_712 IPR011527 ABC transporter type 1, transmembrane domain BF28_712 IPR036640 ABC transporter type 1, transmembrane domain superfamily BF28_712 IPR003439 ABC transporter-like BF28_712 IPR017871 ABC transporter, conserved site BF28_712 IPR039421 Type I protein exporter BF28_712 IPR005074 Peptidase C39, bacteriocin processing BF28_713 IPR023753 FAD/NAD(P)-binding domain BF28_713 IPR036188 FAD/NAD(P)-binding domain superfamily BF28_714 IPR022916 Protein of unknown function UPF0349 BF28_714 IPR009910 Protein of unknown function DUF1450 BF28_715 IPR001653 Diaminopimelate epimerase, DapF BF28_715 IPR018510 Diaminopimelate epimerase, active site BF28_716 IPR017870 FeS cluster insertion, C-terminal, conserved site BF28_716 IPR016092 FeS cluster insertion protein BF28_716 IPR000361 FeS cluster biogenesis BF28_716 IPR035903 HesB-like domain superfamily BF28_719 IPR007553 Domain of unknown function DUF523 BF28_72 IPR001062 Transcription antitermination protein, NusG BF28_72 IPR005824 KOW BF28_72 IPR006645 NusG, N-terminal BF28_72 IPR036735 NusG, N-terminal domain superfamily BF28_72 IPR014722 Ribosomal protein L2, domain 2 BF28_72 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site BF28_72 IPR008991 Translation protein SH3-like domain superfamily BF28_722 IPR011256 Regulatory factor, effector binding domain superfamily BF28_722 IPR029442 GyrI-like small molecule binding domain BF28_722 IPR010499 Bacterial transcription activator, effector binding BF28_724 IPR022890 Ferredoxin--NADP reductase, type 2 BF28_724 IPR023753 FAD/NAD(P)-binding domain BF28_724 IPR036188 FAD/NAD(P)-binding domain superfamily BF28_725 IPR023753 FAD/NAD(P)-binding domain BF28_725 IPR036188 FAD/NAD(P)-binding domain superfamily BF28_726 IPR000086 NUDIX hydrolase domain BF28_726 IPR020084 NUDIX hydrolase, conserved site BF28_726 IPR036412 HAD-like superfamily BF28_726 IPR020476 NUDIX hydrolase BF28_726 IPR023214 HAD superfamily BF28_726 IPR015797 NUDIX hydrolase-like domain superfamily BF28_726 IPR006357 HAD-superfamily hydrolase, subfamily IIA BF28_728 IPR036908 RlpA-like domain superfamily BF28_728 IPR010611 3D domain BF28_729 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal BF28_729 IPR023042 Peptidase M17, leucine aminopeptidase BF28_729 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal BF28_729 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B BF28_73 IPR005807 SecE subunit of protein translocation complex, bacterial-like BF28_73 IPR038379 SecE superfamily BF28_73 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit BF28_730 IPR034693 Diadenylate cyclase CdaS BF28_730 IPR014046 Diadenylate cyclase BF28_730 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily BF28_730 IPR019457 Uncharacterised domain YojJ, N-terminal BF28_730 IPR003390 DNA integrity scanning protein, DisA, N-terminal BF28_731 IPR005841 Alpha-D-phosphohexomutase superfamily BF28_731 IPR016066 Alpha-D-phosphohexomutase, conserved site BF28_731 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily BF28_731 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III BF28_731 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II BF28_731 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III BF28_731 IPR005843 Alpha-D-phosphohexomutase, C-terminal BF28_731 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I BF28_732 IPR029044 Nucleotide-diphospho-sugar transferases BF28_732 IPR005835 Nucleotidyl transferase domain BF28_732 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type BF28_733 IPR003784 BioY protein BF28_735 IPR029069 HotDog domain superfamily BF28_735 IPR003736 Phenylacetic acid degradation-related domain BF28_735 IPR006683 Thioesterase domain BF28_736 IPR033731 Glycyl-tRNA synthetase-like core domain BF28_736 IPR002315 Glycyl-tRNA synthetase BF28_736 IPR022961 Glycine-tRNA ligase, bacterial BF28_736 IPR027031 Glycyl-tRNA synthetase/DNA polymerase subunit gamma-2 BF28_736 IPR036621 Anticodon-binding domain superfamily BF28_736 IPR004154 Anticodon-binding BF28_736 IPR006195 Aminoacyl-tRNA synthetase, class II BF28_736 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) BF28_739 IPR000802 Arsenical pump membrane protein, ArsB BF28_739 IPR004680 Citrate transporter-like domain BF28_74 IPR000792 Transcription regulator LuxR, C-terminal BF28_74 IPR013324 RNA polymerase sigma factor, region 3/4-like BF28_74 IPR013325 RNA polymerase sigma factor, region 2 BF28_74 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 BF28_74 IPR007627 RNA polymerase sigma-70 region 2 BF28_74 IPR000943 RNA polymerase sigma-70 BF28_74 IPR014284 RNA polymerase sigma-70 like domain BF28_74 IPR014218 RNA polymerase sigma-H type BF28_74 IPR016371 RNA polymerase sigma-H factor BF28_740 IPR013520 Exonuclease, RNase T/DNA polymerase III BF28_740 IPR036397 Ribonuclease H superfamily BF28_740 IPR012337 Ribonuclease H-like superfamily BF28_741 IPR014916 Kinase associated protein B BF28_741 IPR038080 Kinase associated protein B superfamily BF28_744 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BF28_744 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BF28_744 IPR015424 Pyridoxal phosphate-dependent transferase BF28_744 IPR027619 Putative C-S lyase BF28_744 IPR004839 Aminotransferase, class I/classII BF28_746 IPR029058 Alpha/Beta hydrolase fold BF28_746 IPR000639 Epoxide hydrolase-like BF28_746 IPR000073 Alpha/beta hydrolase fold-1 BF28_746 IPR013595 Peptidase S33 tripeptidyl aminopeptidase-like, C-terminal BF28_747 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BF28_747 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 BF28_747 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain BF28_747 IPR036291 NAD(P)-binding domain superfamily BF28_747 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site BF28_748 IPR036390 Winged helix DNA-binding domain superfamily BF28_748 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_748 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain BF28_748 IPR019888 Transcription regulator AsnC-type BF28_748 IPR011008 Dimeric alpha-beta barrel BF28_748 IPR000485 AsnC-type HTH domain BF28_749 IPR004839 Aminotransferase, class I/classII BF28_749 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site BF28_749 IPR015424 Pyridoxal phosphate-dependent transferase BF28_749 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BF28_749 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BF28_75 IPR010298 Protein of unknown function DUF901 BF28_750 IPR003029 S1 domain BF28_750 IPR012340 Nucleic acid-binding, OB-fold BF28_750 IPR022967 RNA-binding domain, S1 BF28_751 IPR007211 Protein of unknown function DUF378 BF28_752 IPR018189 Phosphoglucose isomerase, conserved site BF28_752 IPR035476 Phosphoglucose isomerase, SIS domain 1 BF28_752 IPR035482 Phosphoglucose isomerase, SIS domain 2 BF28_752 IPR001672 Phosphoglucose isomerase (PGI) BF28_753 IPR036291 NAD(P)-binding domain superfamily BF28_753 IPR013099 Potassium channel domain BF28_753 IPR003148 Regulator of K+ conductance, N-terminal BF28_754 IPR036491 YugN-like superfamily BF28_754 IPR014967 Uncharacterised protein family, YugN-like BF28_755 IPR003416 MgtC/SapB/SrpB/YhiD family BF28_76 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal BF28_76 IPR013123 RNA 2-O ribose methyltransferase, substrate binding BF28_76 IPR001537 tRNA/rRNA methyltransferase, SpoU type BF28_76 IPR004441 RNA methyltransferase TrmH family BF28_76 IPR029028 Alpha/beta knot methyltransferases BF28_76 IPR029064 50S ribosomal protein L30e-like BF28_763 IPR027304 Trigger factor/SurA domain superfamily BF28_763 IPR036611 Trigger factor ribosome-binding domain superfamily BF28_763 IPR037041 Trigger factor, C-terminal domain superfamily BF28_763 IPR008880 Trigger factor, C-terminal BF28_763 IPR008881 Trigger factor, ribosome-binding, bacterial BF28_763 IPR005215 Trigger factor BF28_77 IPR000999 Ribonuclease III domain BF28_77 IPR008226 Mini-ribonuclease 3 family BF28_77 IPR036389 Ribonuclease III, endonuclease domain superfamily BF28_78 IPR015803 Cysteine-tRNA ligase BF28_78 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding BF28_78 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR BF28_78 IPR032678 tRNA synthetases class I, catalytic domain BF28_78 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BF28_78 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase BF28_782 IPR011304 L-lactate dehydrogenase BF28_782 IPR018177 L-lactate dehydrogenase, active site BF28_782 IPR022383 Lactate/malate dehydrogenase, C-terminal BF28_782 IPR001236 Lactate/malate dehydrogenase, N-terminal BF28_782 IPR001557 L-lactate/malate dehydrogenase BF28_782 IPR036291 NAD(P)-binding domain superfamily BF28_782 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal BF28_784 IPR000209 Peptidase S8/S53 domain BF28_784 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily BF28_784 IPR034213 Vpr-like peptidase, catalytic domain BF28_784 IPR015500 Peptidase S8, subtilisin-related BF28_784 IPR023828 Peptidase S8, subtilisin, Ser-active site BF28_784 IPR022398 Peptidase S8, subtilisin, His-active site BF28_784 IPR023827 Peptidase S8, subtilisin, Asp-active site BF28_784 IPR036852 Peptidase S8/S53 domain superfamily BF28_784 IPR003137 PA domain BF28_784 IPR025965 FlgD Ig-like domain BF28_784 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 BF28_786 IPR013780 Glycosyl hydrolase, all-beta BF28_786 IPR004193 Glycoside hydrolase, family 13, N-terminal BF28_786 IPR006047 Glycosyl hydrolase, family 13, catalytic domain BF28_786 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB BF28_786 IPR037439 1,4-alpha-glucan-branching enzyme BF28_786 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta BF28_786 IPR017853 Glycoside hydrolase superfamily BF28_786 IPR013783 Immunoglobulin-like fold BF28_787 IPR011004 Trimeric LpxA-like superfamily BF28_787 IPR005835 Nucleotidyl transferase domain BF28_787 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial BF28_787 IPR029044 Nucleotide-diphospho-sugar transferases BF28_787 IPR005836 ADP-glucose pyrophosphorylase, conserved site BF28_787 IPR011831 Glucose-1-phosphate adenylyltransferase BF28_788 IPR011004 Trimeric LpxA-like superfamily BF28_788 IPR029044 Nucleotide-diphospho-sugar transferases BF28_788 IPR005835 Nucleotidyl transferase domain BF28_788 IPR011832 Glucose-1-phosphate adenylyltransferase, GlgD subunit BF28_789 IPR001296 Glycosyl transferase, family 1 BF28_789 IPR013534 Starch synthase, catalytic domain BF28_789 IPR011835 Bacterial/plant glycogen synthase BF28_79 IPR010493 Serine acetyltransferase, N-terminal BF28_79 IPR042122 Serine acetyltransferase, N-terminal domain superfamily BF28_79 IPR005881 Serine O-acetyltransferase BF28_79 IPR011004 Trimeric LpxA-like superfamily BF28_79 IPR018357 Hexapeptide transferase, conserved site BF28_79 IPR001451 Hexapeptide repeat BF28_790 IPR035090 Phosphorylase pyridoxal-phosphate attachment site BF28_790 IPR000811 Glycosyl transferase, family 35 BF28_790 IPR011833 Glycogen/starch/alpha-glucan phosphorylase BF28_794 IPR002059 Cold-shock protein, DNA-binding BF28_794 IPR012156 Cold shock, CspA BF28_794 IPR011129 Cold shock domain BF28_794 IPR019844 Cold-shock (CSD) domain BF28_794 IPR012340 Nucleic acid-binding, OB-fold BF28_795 IPR014240 Regulatory protein, YteA family BF28_795 IPR037187 DksA, N-terminal domain superfamily BF28_795 IPR000962 Zinc finger, DksA/TraR C4-type BF28_796 IPR026046 UbiA prenyltransferase domain containing protein 1 BF28_796 IPR000537 UbiA prenyltransferase family BF28_796 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase BF28_797 IPR004561 Isochorismate synthase BF28_797 IPR015890 Chorismate-utilising enzyme, C-terminal BF28_797 IPR005801 ADC synthase BF28_797 IPR034681 Isochorismate synthase MenF BF28_798 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain BF28_798 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding BF28_798 IPR029035 DHS-like NAD/FAD-binding domain superfamily BF28_798 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase BF28_798 IPR032264 Menaquinone biosynthesis protein MenD, middle domain BF28_798 IPR029061 Thiamin diphosphate-binding fold BF28_799 IPR029058 Alpha/Beta hydrolase fold BF28_799 IPR000073 Alpha/beta hydrolase fold-1 BF28_799 IPR000639 Epoxide hydrolase-like BF28_799 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase BF28_80 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BF28_80 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain BF28_80 IPR000924 Glutamyl/glutaminyl-tRNA synthetase BF28_80 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial BF28_80 IPR033910 Glutamyl-tRNA synthetase BF28_80 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site BF28_80 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 BF28_80 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding BF28_800 IPR014748 Enoyl-CoA hydratase, C-terminal BF28_800 IPR001753 Enoyl-CoA hydratase/isomerase BF28_800 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site BF28_800 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB BF28_800 IPR029045 ClpP/crotonase-like domain superfamily BF28_801 IPR010192 2-succinylbenzoate--CoA ligase BF28_801 IPR000873 AMP-dependent synthetase/ligase BF28_801 IPR020845 AMP-binding, conserved site BF28_801 IPR025110 AMP-binding enzyme, C-terminal domain BF28_801 IPR042099 AMP-dependent synthetase-like superfamily BF28_802 IPR010197 o-Succinylbenzoate synthase, MenC type 2 BF28_802 IPR029065 Enolase C-terminal domain-like BF28_802 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal BF28_802 IPR036849 Enolase-like, C-terminal domain superfamily BF28_802 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain BF28_802 IPR029017 Enolase-like, N-terminal BF28_803 IPR001867 OmpR/PhoB-type DNA-binding domain BF28_803 IPR016032 Signal transduction response regulator, C-terminal effector BF28_803 IPR001789 Signal transduction response regulator, receiver domain BF28_803 IPR039420 Transcriptional regulatory protein WalR-like BF28_803 IPR011006 CheY-like superfamily BF28_803 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_804 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BF28_804 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BF28_804 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BF28_804 IPR005467 Histidine kinase domain BF28_804 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BF28_804 IPR003594 Histidine kinase/HSP90-like ATPase BF28_805 IPR003709 Peptidase M15B BF28_805 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily BF28_806 IPR016193 Cytidine deaminase-like BF28_806 IPR016192 APOBEC/CMP deaminase, zinc-binding BF28_806 IPR002125 Cytidine and deoxycytidylate deaminase domain BF28_807 IPR006043 Xanthine/uracil/vitamin C permease BF28_807 IPR006042 Xanthine/uracil permease BF28_808 IPR005119 LysR, substrate-binding BF28_808 IPR000847 Transcription regulator HTH, LysR BF28_808 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_808 IPR036390 Winged helix DNA-binding domain superfamily BF28_809 IPR020043 Deacetylase Atu3266-like BF28_809 IPR006680 Amidohydrolase-related BF28_809 IPR011059 Metal-dependent hydrolase, composite domain superfamily BF28_809 IPR032466 Metal-dependent hydrolase BF28_81 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase BF28_81 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site BF28_81 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily BF28_810 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BF28_810 IPR018319 L-seryl-tRNA selenium transferase-like BF28_810 IPR006337 D-glucosaminate-6-phosphate ammonia lyase DgaE-like BF28_810 IPR015424 Pyridoxal phosphate-dependent transferase BF28_811 IPR010763 2-dehydro-3-deoxy-phosphogluconate aldolase BF28_811 IPR013785 Aldolase-type TIM barrel BF28_814 IPR003474 Gluconate transporter BF28_816 IPR003838 ABC transporter permease protein domain BF28_816 IPR027022 ABC transporter permease protein, BceB-type BF28_817 IPR003439 ABC transporter-like BF28_817 IPR017871 ABC transporter, conserved site BF28_817 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_817 IPR003593 AAA+ ATPase domain BF28_818 IPR003838 ABC transporter permease protein domain BF28_818 IPR027022 ABC transporter permease protein, BceB-type BF28_819 IPR003838 ABC transporter permease protein domain BF28_819 IPR027022 ABC transporter permease protein, BceB-type BF28_82 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase BF28_82 IPR034683 Cytidylyltransferase IspD/TarI BF28_82 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site BF28_82 IPR029044 Nucleotide-diphospho-sugar transferases BF28_820 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BF28_820 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BF28_820 IPR005467 Histidine kinase domain BF28_820 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BF28_820 IPR003594 Histidine kinase/HSP90-like ATPase BF28_821 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_821 IPR039420 Transcriptional regulatory protein WalR-like BF28_821 IPR001789 Signal transduction response regulator, receiver domain BF28_821 IPR016032 Signal transduction response regulator, C-terminal effector BF28_821 IPR001867 OmpR/PhoB-type DNA-binding domain BF28_821 IPR011006 CheY-like superfamily BF28_822 IPR011991 ArsR-like helix-turn-helix domain BF28_822 IPR001845 HTH ArsR-type DNA-binding domain BF28_822 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_822 IPR036390 Winged helix DNA-binding domain superfamily BF28_823 IPR026272 Immunity protein SdpI BF28_823 IPR025962 SdpI/YhfL protein family BF28_823 IPR012867 Domain of unknown function DUF1648 BF28_824 IPR003593 AAA+ ATPase domain BF28_824 IPR003439 ABC transporter-like BF28_824 IPR017871 ABC transporter, conserved site BF28_824 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_826 IPR020449 Transcription regulator HTH, AraC- type BF28_826 IPR018062 HTH domain AraC-type, conserved site BF28_826 IPR018060 DNA binding HTH domain, AraC-type BF28_826 IPR011256 Regulatory factor, effector binding domain superfamily BF28_826 IPR009057 Homeobox-like domain superfamily BF28_826 IPR010499 Bacterial transcription activator, effector binding BF28_826 IPR029442 GyrI-like small molecule binding domain BF28_827 IPR003593 AAA+ ATPase domain BF28_827 IPR003439 ABC transporter-like BF28_827 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_828 IPR003838 ABC transporter permease protein domain BF28_828 IPR027022 ABC transporter permease protein, BceB-type BF28_83 IPR002792 TRAM domain BF28_83 IPR002716 PIN domain BF28_83 IPR029060 PIN-like domain superfamily BF28_830 IPR018062 HTH domain AraC-type, conserved site BF28_830 IPR020449 Transcription regulator HTH, AraC- type BF28_830 IPR018060 DNA binding HTH domain, AraC-type BF28_830 IPR037923 Transcription regulator HTH-like BF28_830 IPR009057 Homeobox-like domain superfamily BF28_830 IPR003313 AraC-type arabinose-binding/dimerisation domain BF28_831 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BF28_831 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm BF28_831 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal BF28_831 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site BF28_831 IPR023165 rRNA adenine dimethylase-like BF28_831 IPR011530 Ribosomal RNA adenine dimethylase BF28_832 IPR032816 SNARE associated Golgi protein BF28_838 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal BF28_838 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily BF28_838 IPR001206 Diacylglycerol kinase, catalytic domain BF28_838 IPR005218 Diacylglycerol/lipid kinase BF28_84 IPR003390 DNA integrity scanning protein, DisA, N-terminal BF28_84 IPR018906 DNA integrity scanning, DisA, linker region BF28_84 IPR010994 RuvA domain 2-like BF28_84 IPR038331 DisA, linker domain superfamily BF28_84 IPR023763 DNA integrity scanning protein, DisA BF28_84 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily BF28_844 IPR001789 Signal transduction response regulator, receiver domain BF28_844 IPR011006 CheY-like superfamily BF28_844 IPR016032 Signal transduction response regulator, C-terminal effector BF28_844 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_844 IPR001867 OmpR/PhoB-type DNA-binding domain BF28_844 IPR039420 Transcriptional regulatory protein WalR-like BF28_845 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BF28_845 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BF28_845 IPR005467 Histidine kinase domain BF28_845 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BF28_845 IPR003594 Histidine kinase/HSP90-like ATPase BF28_845 IPR003660 HAMP domain BF28_846 IPR012651 Thiamine transporter ThiT BF28_848 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_848 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain BF28_848 IPR030389 FeoB-type guanine nucleotide-binding (G) domain BF28_848 IPR041069 FeoB, cytosolic helical domain BF28_848 IPR003373 Ferrous iron transport protein B BF28_848 IPR011640 Ferrous iron transport protein B, C-terminal BF28_85 IPR004504 DNA repair protein RadA BF28_85 IPR041166 LapB, rubredoxin metal binding domain BF28_85 IPR003593 AAA+ ATPase domain BF28_85 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain BF28_85 IPR020568 Ribosomal protein S5 domain 2-type fold BF28_85 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_85 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BF28_851 IPR007157 PspA/IM30 BF28_856 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal BF28_856 IPR003740 Uncharacterised membrane protein YitT BF28_856 IPR019264 Domain of unknown function DUF2179 BF28_859 IPR019618 Spore germination protein GerPA/GerPF BF28_86 IPR003959 ATPase, AAA-type, core BF28_86 IPR019489 Clp ATPase, C-terminal BF28_86 IPR036628 Clp, N-terminal domain superfamily BF28_86 IPR004176 Clp, N-terminal BF28_86 IPR001270 ClpA/B family BF28_86 IPR003593 AAA+ ATPase domain BF28_86 IPR018368 ClpA/B, conserved site 1 BF28_86 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_86 IPR041546 ClpA/ClpB, AAA lid domain BF28_86 IPR028299 ClpA/B, conserved site 2 BF28_86 IPR001943 UVR domain BF28_860 IPR003317 Cytochrome ubiquinol oxidase subunit 2 BF28_861 IPR002585 Cytochrome ubiquinol oxidase subunit 1 BF28_862 IPR002696 Putative membrane protein insertion efficiency factor BF28_863 IPR036874 Carbonic anhydrase superfamily BF28_863 IPR001765 Carbonic anhydrase BF28_864 IPR037005 S-ribosylhomocysteinase (LuxS) superfamily BF28_864 IPR003815 S-ribosylhomocysteinase (LuxS) BF28_864 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like BF28_867 IPR000086 NUDIX hydrolase domain BF28_867 IPR020084 NUDIX hydrolase, conserved site BF28_867 IPR015797 NUDIX hydrolase-like domain superfamily BF28_867 IPR020476 NUDIX hydrolase BF28_867 IPR014078 Nucleoside triphosphatase YtkD BF28_869 IPR036412 HAD-like superfamily BF28_869 IPR041492 Haloacid dehalogenase-like hydrolase BF28_869 IPR023214 HAD superfamily BF28_869 IPR023198 Phosphoglycolate phosphatase-like, domain 2 BF28_869 IPR023733 Pyrophosphatase PpaX BF28_869 IPR006439 HAD hydrolase, subfamily IA BF28_87 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain BF28_87 IPR022414 ATP:guanido phosphotransferase, catalytic domain BF28_87 IPR022415 ATP:guanido phosphotransferase active site BF28_87 IPR000749 ATP:guanido phosphotransferase BF28_87 IPR023660 Protein arginine kinase BF28_872 IPR035906 MetI-like superfamily BF28_872 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BF28_873 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_873 IPR003439 ABC transporter-like BF28_873 IPR003593 AAA+ ATPase domain BF28_873 IPR017871 ABC transporter, conserved site BF28_877 IPR000917 Sulfatase, N-terminal BF28_877 IPR017850 Alkaline-phosphatase-like, core domain superfamily BF28_878 IPR013595 Peptidase S33 tripeptidyl aminopeptidase-like, C-terminal BF28_878 IPR000639 Epoxide hydrolase-like BF28_878 IPR000073 Alpha/beta hydrolase fold-1 BF28_878 IPR029058 Alpha/Beta hydrolase fold BF28_879 IPR001610 PAC motif BF28_879 IPR005467 Histidine kinase domain BF28_879 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BF28_879 IPR003594 Histidine kinase/HSP90-like ATPase BF28_879 IPR013767 PAS fold BF28_879 IPR035965 PAS domain superfamily BF28_879 IPR013655 PAS fold-3 BF28_879 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BF28_879 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BF28_879 IPR000014 PAS domain BF28_879 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BF28_88 IPR036876 UVR domain superfamily BF28_88 IPR025542 YacH protein BF28_88 IPR001943 UVR domain BF28_880 IPR005467 Histidine kinase domain BF28_880 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BF28_880 IPR013767 PAS fold BF28_880 IPR003594 Histidine kinase/HSP90-like ATPase BF28_880 IPR035965 PAS domain superfamily BF28_880 IPR000014 PAS domain BF28_880 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BF28_880 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BF28_880 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BF28_881 IPR023198 Phosphoglycolate phosphatase-like, domain 2 BF28_881 IPR036412 HAD-like superfamily BF28_881 IPR006439 HAD hydrolase, subfamily IA BF28_881 IPR041492 Haloacid dehalogenase-like hydrolase BF28_881 IPR023214 HAD superfamily BF28_881 IPR023733 Pyrophosphatase PpaX BF28_882 IPR001034 DeoR-type HTH domain BF28_882 IPR018356 Transcription regulator, HTH DeoR-type, conserved site BF28_882 IPR037171 NagB/RpiA transferase-like BF28_882 IPR014036 DeoR C-terminal sensor domain BF28_882 IPR036390 Winged helix DNA-binding domain superfamily BF28_882 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_883 IPR023214 HAD superfamily BF28_883 IPR006439 HAD hydrolase, subfamily IA BF28_883 IPR023198 Phosphoglycolate phosphatase-like, domain 2 BF28_883 IPR023733 Pyrophosphatase PpaX BF28_883 IPR041492 Haloacid dehalogenase-like hydrolase BF28_883 IPR036412 HAD-like superfamily BF28_884 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily BF28_884 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 BF28_89 IPR040465 CtsR, N-terminal HTH domain BF28_89 IPR041902 CtsR, N-terminal domain superfamily BF28_89 IPR041908 CtsR, C-terminal domain superfamily BF28_89 IPR041473 CtsR, C-terminal dimerization domain BF28_89 IPR008463 Transcriptional regulator CtsR BF28_890 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising BF28_890 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal BF28_890 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal BF28_890 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site BF28_891 IPR022630 S-adenosylmethionine synthetase, C-terminal BF28_891 IPR022629 S-adenosylmethionine synthetase, central domain BF28_891 IPR022628 S-adenosylmethionine synthetase, N-terminal BF28_891 IPR022631 S-adenosylmethionine synthetase, conserved site BF28_891 IPR002133 S-adenosylmethionine synthetase BF28_891 IPR022636 S-adenosylmethionine synthetase superfamily BF28_892 IPR016181 Acyl-CoA N-acyltransferase BF28_892 IPR000182 GNAT domain BF28_895 IPR008284 Molybdenum cofactor biosynthesis, conserved site BF28_895 IPR001453 MoaB/Mog domain BF28_895 IPR036425 MoaB/Mog-like domain superfamily BF28_895 IPR012245 Molybdenum cofactor biosynthesis protein MoaB BF28_896 IPR029044 Nucleotide-diphospho-sugar transferases BF28_896 IPR013482 Molybdenum cofactor guanylyltransferase BF28_896 IPR025877 MobA-like NTP transferase BF28_897 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain BF28_897 IPR001296 Glycosyl transferase, family 1 BF28_898 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily BF28_898 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase BF28_899 IPR011004 Trimeric LpxA-like superfamily BF28_899 IPR001451 Hexapeptide repeat BF28_900 IPR022742 Serine aminopeptidase, S33 BF28_900 IPR029058 Alpha/Beta hydrolase fold BF28_900 IPR000073 Alpha/beta hydrolase fold-1 BF28_901 IPR019712 Tetraprenyl-beta-curcumene synthase YtpB-like BF28_904 IPR018728 Domain of unknown function DUF2268 BF28_906 IPR033134 Asp/Glu racemase, active site 2 BF28_906 IPR004380 Aspartate racemase BF28_906 IPR018187 Asp/Glu racemase, active site 1 BF28_906 IPR001920 Asp/Glu racemase BF28_906 IPR015942 Asp/Glu/hydantoin racemase BF28_908 IPR003439 ABC transporter-like BF28_908 IPR017871 ABC transporter, conserved site BF28_908 IPR025302 Domain of unknown function DUF4162 BF28_908 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_908 IPR003593 AAA+ ATPase domain BF28_909 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BF28_909 IPR010719 Putative rRNA methylase BF28_910 IPR032432 Radical SAM, C-terminal extension BF28_910 IPR006638 Elp3/MiaB/NifB BF28_910 IPR007197 Radical SAM BF28_910 IPR023404 Radical SAM, alpha/beta horseshoe BF28_910 IPR039661 ELP3/YhcC BF28_910 IPR005911 Protein YhcC-like BF28_911 IPR019668 Uncharacterised protein family YtzC BF28_913 IPR007349 Domain of unknown function DUF418 BF28_913 IPR012429 Domain of unknown function DUF1624 BF28_914 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_914 IPR003593 AAA+ ATPase domain BF28_914 IPR003439 ABC transporter-like BF28_916 IPR011010 DNA breaking-rejoining enzyme, catalytic core BF28_916 IPR013762 Integrase-like, catalytic domain superfamily BF28_916 IPR002104 Integrase, catalytic domain BF28_917 IPR026278 Potassium/proton antiporter subunit KhtT BF28_917 IPR006037 Regulator of K+ conductance, C-terminal BF28_917 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily BF28_918 IPR006153 Cation/H+ exchanger BF28_918 IPR038770 Sodium/solute symporter superfamily BF28_919 IPR020846 Major facilitator superfamily domain BF28_919 IPR011701 Major facilitator superfamily BF28_919 IPR036259 MFS transporter superfamily BF28_920 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BF28_920 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain BF28_920 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding BF28_920 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding BF28_920 IPR015413 Methionyl/Leucyl tRNA synthetase BF28_920 IPR025709 Leucyl-tRNA synthetase, editing domain BF28_920 IPR002302 Leucine-tRNA ligase BF28_920 IPR002300 Aminoacyl-tRNA synthetase, class Ia BF28_920 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site BF28_925 IPR004761 Spore germination GerAB BF28_926 IPR004995 Bacillus/Clostridium Ger spore germination protein BF28_927 IPR029058 Alpha/Beta hydrolase fold BF28_927 IPR000073 Alpha/beta hydrolase fold-1 BF28_927 IPR008220 Homoserine/serine acetyltransferase MetX-like BF28_929 IPR001763 Rhodanese-like domain BF28_929 IPR036873 Rhodanese-like domain superfamily BF28_933 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site BF28_933 IPR006638 Elp3/MiaB/NifB BF28_933 IPR007197 Radical SAM BF28_933 IPR013785 Aldolase-type TIM barrel BF28_933 IPR013483 Molybdenum cofactor biosynthesis protein A BF28_933 IPR010505 Molybdenum cofactor synthesis C-terminal BF28_934 IPR035985 Ubiquitin-activating enzyme BF28_934 IPR000594 THIF-type NAD/FAD binding fold BF28_935 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain BF28_935 IPR023045 Molybdenum cofactor biosynthesis C BF28_935 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily BF28_936 IPR036688 MoeA, C-terminal, domain IV superfamily BF28_936 IPR005111 MoeA, C-terminal, domain IV BF28_936 IPR036135 MoeA, N-terminal and linker domain superfamily BF28_936 IPR038987 Molybdopterin biosynthesis protein MoeA-like BF28_936 IPR001453 MoaB/Mog domain BF28_936 IPR036425 MoaB/Mog-like domain superfamily BF28_936 IPR005110 MoeA, N-terminal and linker domain BF28_937 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain BF28_937 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_938 IPR003448 Molybdopterin biosynthesis MoaE BF28_938 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily BF28_941 IPR010651 Sugar transport protein BF28_942 IPR002347 Short-chain dehydrogenase/reductase SDR BF28_942 IPR020904 Short-chain dehydrogenase/reductase, conserved site BF28_942 IPR036291 NAD(P)-binding domain superfamily BF28_943 IPR036101 CarD-like/TRCF domain superfamily BF28_943 IPR042215 CarD-like, C-terminal domain BF28_943 IPR003711 CarD-like/TRCF domain BF28_945 IPR020296 Sporulation protein Cse60 BF28_947 IPR013538 Activator of Hsp90 ATPase homologue 1-like BF28_947 IPR023393 START-like domain superfamily BF28_948 IPR011991 ArsR-like helix-turn-helix domain BF28_948 IPR018334 ArsR-type transcription regulator, HTH motif BF28_948 IPR001845 HTH ArsR-type DNA-binding domain BF28_948 IPR036390 Winged helix DNA-binding domain superfamily BF28_948 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_949 IPR011701 Major facilitator superfamily BF28_949 IPR020846 Major facilitator superfamily domain BF28_949 IPR036259 MFS transporter superfamily BF28_949 IPR004638 Drug resistance transporter EmrB-like BF28_950 IPR036188 FAD/NAD(P)-binding domain superfamily BF28_950 IPR004792 3-Dehydro-bile acid delta(4,6)-reductase-like BF28_950 IPR023166 HI0933-like insert domain superfamily BF28_951 IPR024923 Peptidoglycan biosynthesis protein, SpoVB-type BF28_951 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain BF28_951 IPR002797 Polysaccharide biosynthesis protein BF28_952 IPR002942 RNA-binding S4 domain BF28_952 IPR006145 Pseudouridine synthase, RsuA/RluA BF28_952 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F BF28_952 IPR036986 RNA-binding S4 domain superfamily BF28_952 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain BF28_952 IPR020103 Pseudouridine synthase, catalytic domain superfamily BF28_952 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site BF28_953 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_953 IPR036390 Winged helix DNA-binding domain superfamily BF28_953 IPR001034 DeoR-type HTH domain BF28_954 IPR002933 Peptidase M20 BF28_954 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site BF28_954 IPR010964 Peptidase M20A, peptidase V-related BF28_954 IPR036264 Bacterial exopeptidase dimerisation domain BF28_955 IPR014051 Phosphoesterase, HXTX BF28_955 IPR009097 Cyclic phosphodiesterase BF28_955 IPR004175 RNA 2',3'-cyclic phosphodiesterase BF28_956 IPR014756 Immunoglobulin E-set BF28_956 IPR017853 Glycoside hydrolase superfamily BF28_956 IPR013783 Immunoglobulin-like fold BF28_956 IPR004193 Glycoside hydrolase, family 13, N-terminal BF28_956 IPR040697 Pullulanase, N1 domain BF28_956 IPR006047 Glycosyl hydrolase, family 13, catalytic domain BF28_956 IPR011840 Pullulanase, type I BF28_956 IPR013780 Glycosyl hydrolase, all-beta BF28_957 IPR011009 Protein kinase-like domain superfamily BF28_957 IPR002575 Aminoglycoside phosphotransferase BF28_958 IPR025547 YtzH-like protein BF28_959 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BF28_959 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type BF28_960 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BF28_960 IPR001279 Metallo-beta-lactamase BF28_962 IPR023367 Peptidase M42, domain 2 BF28_962 IPR008007 Peptidase M42 BF28_963 IPR029001 Inosine triphosphate pyrophosphatase-like BF28_963 IPR002786 Inosine/xanthosine triphosphatase BF28_963 IPR026533 Non-canonical purine NTP phosphatase/PRRC1 BF28_964 IPR013766 Thioredoxin domain BF28_964 IPR036249 Thioredoxin-like superfamily BF28_965 IPR010838 Protein of unknown unction DUF1444 BF28_966 IPR012340 Nucleic acid-binding, OB-fold BF28_966 IPR027855 Domain of unknown function DUF4479 BF28_966 IPR002547 tRNA-binding domain BF28_966 IPR033714 Phenylalanly tRNA synthetase, tRNA-binding-domain BF28_966 IPR037154 YtpR-like superfamily BF28_968 IPR027417 P-loop containing nucleoside triphosphate hydrolase BF28_968 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_968 IPR018541 FtsK gamma domain BF28_968 IPR003593 AAA+ ATPase domain BF28_968 IPR041027 FtsK alpha domain BF28_968 IPR002543 FtsK domain BF28_968 IPR036390 Winged helix DNA-binding domain superfamily BF28_970 IPR036565 Mur-like, catalytic domain superfamily BF28_970 IPR004101 Mur ligase, C-terminal BF28_970 IPR036615 Mur ligase, C-terminal domain superfamily BF28_970 IPR013221 Mur ligase, central BF28_970 IPR000713 Mur ligase, N-terminal catalytic domain BF28_970 IPR005758 UDP-N-acetylmuramate--L-alanine ligase BF28_972 IPR036390 Winged helix DNA-binding domain superfamily BF28_972 IPR005149 Transcription regulator PadR, N-terminal BF28_972 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_973 IPR000182 GNAT domain BF28_973 IPR016181 Acyl-CoA N-acyltransferase BF28_977 IPR035097 Peptidase M29, N-terminal BF28_977 IPR000787 Peptidase M29 BF28_979 IPR022551 Protein of unknown function DUF2847 BF28_979 IPR036249 Thioredoxin-like superfamily BF28_980 IPR011426 CamS sex pheromone cAM373 BF28_982 IPR028082 Periplasmic binding protein-like I BF28_982 IPR010982 Lambda repressor-like, DNA-binding domain superfamily BF28_982 IPR000843 LacI-type HTH domain BF28_982 IPR006377 Catabolite control protein A BF28_987 IPR036019 Gated mechanosensitive channel BF28_987 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L BF28_987 IPR019823 Large-conductance mechanosensitive channel, conserved site BF28_987 IPR001185 Large-conductance mechanosensitive channel BF28_988 IPR036291 NAD(P)-binding domain superfamily BF28_988 IPR000683 Oxidoreductase, N-terminal BF28_989 IPR036770 Ankyrin repeat-containing domain superfamily BF28_989 IPR002110 Ankyrin repeat BF28_989 IPR020683 Ankyrin repeat-containing domain BF28_990 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BF28_990 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BF28_990 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BF28_990 IPR000014 PAS domain BF28_990 IPR035965 PAS domain superfamily BF28_990 IPR003660 HAMP domain BF28_990 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BF28_990 IPR003594 Histidine kinase/HSP90-like ATPase BF28_990 IPR005467 Histidine kinase domain BF28_991 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_991 IPR011006 CheY-like superfamily BF28_991 IPR001867 OmpR/PhoB-type DNA-binding domain BF28_991 IPR016032 Signal transduction response regulator, C-terminal effector BF28_991 IPR001789 Signal transduction response regulator, receiver domain BF28_991 IPR039420 Transcriptional regulatory protein WalR-like BF28_993 IPR023791 2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate hydrolase BF28_993 IPR000639 Epoxide hydrolase-like BF28_993 IPR000073 Alpha/beta hydrolase fold-1 BF28_993 IPR029058 Alpha/Beta hydrolase fold BF28_994 IPR023696 Ureohydrolase domain superfamily BF28_994 IPR023801 Histone deacetylase domain BF28_994 IPR000286 Histone deacetylase family BF28_994 IPR003085 Acetoin utilization protein AcuC BF28_994 IPR037138 Histone deacetylase domain superfamily BF28_995 IPR000644 CBS domain BF28_996 IPR024699 Acetoin utilization protein AcuA BF28_996 IPR016181 Acyl-CoA N-acyltransferase BF28_996 IPR000182 GNAT domain BF28_997 IPR020845 AMP-binding, conserved site BF28_997 IPR042099 AMP-dependent synthetase-like superfamily BF28_997 IPR000873 AMP-dependent synthetase/ligase BF28_997 IPR025110 AMP-binding enzyme, C-terminal domain BF28_999 IPR014284 RNA polymerase sigma-70 like domain BF28_999 IPR014294 RNA polymerase sigma-W, bacillaceae BF28_999 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site BF28_999 IPR007627 RNA polymerase sigma-70 region 2 BF28_999 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 BF28_999 IPR013325 RNA polymerase sigma factor, region 2 BF28_999 IPR013324 RNA polymerase sigma factor, region 3/4-like BF28_999 IPR036388 Winged helix-like DNA-binding domain superfamily BF28_999 IPR039425 RNA polymerase sigma-70 like