bcf_00005 SM00382 ATPases associated with a variety of cellular activities bcf_00005 SM00760 Bacterial dnaA protein helix-turn-helix domain bcf_00010 SM00480 DNA polymerase III beta subunit bcf_00025 SM00387 Histidine kinase-like ATPases bcf_00025 SM00433 TopoisomeraseII bcf_00030 SM00434 DNA Topoisomerase IV bcf_00065 SM00116 Domain in cystathionine beta-synthase and other proteins. bcf_00065 SM01240 bcf_00065 bcf_00070 SM01240 bcf_00070 bcf_00075 SM00936 Penicillin-binding protein 5, C-terminal domain bcf_00125 SM00382 ATPases associated with a variety of cellular activities bcf_00135 SM00493 bcf_00135 bcf_00220 SM00966 SpoVT / AbrB like domain bcf_00235 SM00493 bcf_00235 bcf_00240 SM00650 Ribosomal RNA adenine dimethylases bcf_00290 SM01400 bcf_00290 bcf_00305 SM00487 DEAD-like helicases superfamily bcf_00305 SM00490 helicase superfamily c-terminal domain bcf_00305 SM00982 bcf_00305 bcf_00305 SM01058 CarD-like/TRCF domain bcf_00310 SM00966 SpoVT / AbrB like domain bcf_00325 SM00363 S4 RNA-binding domain bcf_00345 SM00316 Ribosomal protein S1-like RNA-binding domain bcf_00360 SM00331 Sigma factor PP2C-like phosphatases bcf_00360 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain bcf_00365 SM00977 TilS substrate C-terminal domain bcf_00375 SM00382 ATPases associated with a variety of cellular activities bcf_00415 SM00905 Dihydroneopterin aldolase bcf_00425 SM00530 Helix-turn-helix XRE-family like proteins bcf_00530 SM00382 ATPases associated with a variety of cellular activities bcf_00530 SM01086 C-terminal, D2-small domain, of ClpB protein bcf_00535 SM00382 ATPases associated with a variety of cellular activities bcf_00545 SM00670 Large family of predicted nucleotide-binding domains bcf_00570 SM00840 bcf_00570 bcf_00575 SM00535 Ribonuclease III family bcf_00580 SM00967 RNA 2'-O ribose methyltransferase substrate binding bcf_00590 SM00421 helix_turn_helix, Lux Regulon bcf_00605 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. bcf_00610 SM00649 Ribosomal protein L11/L12 bcf_00640 SM00663 RNA polymerase I subunit A N-terminus bcf_00665 SM00838 Elongation factor G C-terminus bcf_00665 SM00889 Elongation factor G, domain IV bcf_00675 SM01403 bcf_00675 bcf_00695 SM01382 bcf_00695 bcf_00695 SM01383 bcf_00695 bcf_00710 SM00322 K homology RNA-binding domain bcf_00730 SM01374 bcf_00730 bcf_00735 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. bcf_00795 SM00316 Ribosomal protein S1-like RNA-binding domain bcf_00815 SM00662 RNA polymerases D bcf_00825 SM00382 ATPases associated with a variety of cellular activities bcf_00830 SM00382 ATPases associated with a variety of cellular activities bcf_00860 SM00646 bcf_00860 bcf_00875 SM01251 bcf_00875 bcf_00990 SM00345 helix_turn_helix gluconate operon transcriptional repressor bcf_00990 SM00895 bcf_00990 bcf_01005 SM01350 bcf_01005 bcf_01050 SM00382 ATPases associated with a variety of cellular activities bcf_01050 SM00930 bcf_01050 bcf_01060 SM00829 Enoylreductase bcf_01115 SM00382 ATPases associated with a variety of cellular activities bcf_01120 SM00382 ATPases associated with a variety of cellular activities bcf_01135 SM00342 helix_turn_helix, arabinose operon control protein bcf_01215 SM00563 Phosphate acyltransferases bcf_01225 SM00354 helix_turn _helix lactose operon repressor bcf_01285 SM00382 ATPases associated with a variety of cellular activities bcf_01320 SM00382 ATPases associated with a variety of cellular activities bcf_01325 SM00382 ATPases associated with a variety of cellular activities bcf_01380 SM00487 DEAD-like helicases superfamily bcf_01380 SM00490 helicase superfamily c-terminal domain bcf_01405 SM01005 Alanine racemase, C-terminal domain bcf_01420 SM00316 Ribosomal protein S1-like RNA-binding domain bcf_01420 SM00732 Likely ribonuclease with RNase H fold. bcf_01425 SM00731 SprT homologues. bcf_01530 SM00382 ATPases associated with a variety of cellular activities bcf_01535 SM00881 CoA binding domain bcf_01550 SM00883 Chaperonin 10 Kd subunit bcf_01575 SM00860 SMI1 / KNR4 family bcf_01590 SM00448 cheY-homologous receiver domain bcf_01590 SM00862 Transcriptional regulatory protein, C terminal bcf_01595 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain bcf_01595 SM00387 Histidine kinase-like ATPases bcf_01595 SM00388 His Kinase A (phosphoacceptor) domain bcf_01670 SM01001 AIR carboxylase bcf_01680 SM00998 Adenylosuccinate lyase C-terminus bcf_01695 SM01211 bcf_01695 bcf_01720 SM00798 AICARFT/IMPCHase bienzyme bcf_01720 SM00851 MGS-like domain bcf_01725 SM01209 bcf_01725 bcf_01725 SM01210 bcf_01725 bcf_01735 SM00244 prohibitin homologues bcf_01755 SM00278 Helix-hairpin-helix DNA-binding motif class 1 bcf_01755 SM00292 breast cancer carboxy-terminal domain bcf_01755 SM00532 Ligase N family bcf_01785 SM00382 ATPases associated with a variety of cellular activities bcf_01785 SM00930 bcf_01785 bcf_01815 SM00347 helix_turn_helix multiple antibiotic resistance protein bcf_01835 SM00845 GatB domain bcf_01840 SM00046 Diacylglycerol kinase catalytic domain (presumed) bcf_01855 SM00382 ATPases associated with a variety of cellular activities bcf_01900 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. bcf_01900 SM00387 Histidine kinase-like ATPases bcf_01900 SM00388 His Kinase A (phosphoacceptor) domain bcf_01925 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain bcf_01970 SM01007 Class II Aldolase and Adducin N-terminal domain bcf_02080 SM00062 Bacterial periplasmic substrate-binding proteins bcf_02080 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. bcf_02085 SM00382 ATPases associated with a variety of cellular activities bcf_02090 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). bcf_02090 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain bcf_02095 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). bcf_02095 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain bcf_02100 SM00642 Alpha-amylase domain bcf_02120 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain bcf_02120 SM00437 Bacterial DNA topoisomerase I DNA-binding domain bcf_02120 SM00493 bcf_02120 bcf_02140 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). bcf_02140 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain bcf_02160 SM00382 ATPases associated with a variety of cellular activities bcf_02165 SM00382 ATPases associated with a variety of cellular activities bcf_02170 SM00060 Fibronectin type 3 domain bcf_02170 SM00636 bcf_02170 bcf_02170 SM00637 bcf_02170 bcf_02210 SM00530 Helix-turn-helix XRE-family like proteins bcf_02235 SM00946 Prolyl-tRNA synthetase, C-terminal bcf_02280 SM00831 Cation transporter/ATPase, N-terminus bcf_02290 SM00226 Low molecular weight phosphatase family bcf_02380 SM00478 endonuclease III bcf_02400 SM00382 ATPases associated with a variety of cellular activities bcf_02425 SM00530 Helix-turn-helix XRE-family like proteins bcf_02475 SM00984 UDP binding domain bcf_02555 SM00478 endonuclease III bcf_02555 SM00525 bcf_02555 bcf_02585 SM00382 ATPases associated with a variety of cellular activities bcf_02605 SM00382 ATPases associated with a variety of cellular activities bcf_02765 SM00382 ATPases associated with a variety of cellular activities bcf_02800 SM00567 E-Z type HEAT repeats bcf_02815 SM00052 Putative diguanylate phosphodiesterase bcf_02815 SM00091 PAS domain bcf_02815 SM00267 diguanylate cyclase bcf_02825 SM00763 PrkA AAA domain bcf_02835 SM00364 Leucine-rich repeats, bacterial type bcf_02835 SM00365 Leucine-rich repeat, SDS22-like subfamily bcf_02835 SM00369 Leucine-rich repeats, typical (most populated) subfamily bcf_02835 SM00725 NEAr Transporter domain bcf_02860 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins bcf_02870 SM00244 prohibitin homologues bcf_02875 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). bcf_02875 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain bcf_02880 SM00091 PAS domain bcf_02880 SM00387 Histidine kinase-like ATPases bcf_02885 SM00448 cheY-homologous receiver domain bcf_02905 SM00248 ankyrin repeats bcf_02920 SM00448 cheY-homologous receiver domain bcf_02920 SM00862 Transcriptional regulatory protein, C terminal bcf_02925 SM00387 Histidine kinase-like ATPases bcf_02925 SM00388 His Kinase A (phosphoacceptor) domain bcf_02940 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). bcf_02940 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain bcf_02945 SM00387 Histidine kinase-like ATPases bcf_02950 SM00448 cheY-homologous receiver domain bcf_02960 SM00919 Malic enzyme, NAD binding domain bcf_02960 SM01274 bcf_02960 bcf_02975 SM00345 helix_turn_helix gluconate operon transcriptional repressor bcf_02985 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain bcf_02985 SM00387 Histidine kinase-like ATPases bcf_02985 SM00388 His Kinase A (phosphoacceptor) domain bcf_02990 SM00448 cheY-homologous receiver domain bcf_02990 SM00862 Transcriptional regulatory protein, C terminal bcf_03015 SM00926 Molybdopterin oxidoreductase Fe4S4 domain bcf_03015 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region bcf_03030 SM01002 Alanine dehydrogenase/PNT, C-terminal domain bcf_03030 SM01003 Alanine dehydrogenase/PNT, N-terminal domain bcf_03040 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor bcf_03055 SM00530 Helix-turn-helix XRE-family like proteins bcf_03060 SM00028 Tetratricopeptide repeats bcf_03110 SM01091 Transporter associated domain bcf_03125 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor bcf_03160 SM00382 ATPases associated with a variety of cellular activities bcf_03185 SM00327 von Willebrand factor (vWF) type A domain bcf_03190 SM00382 ATPases associated with a variety of cellular activities bcf_03195 SM00155 Phospholipase D. Active site motifs. bcf_03205 SM00052 Putative diguanylate phosphodiesterase bcf_03205 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) bcf_03205 SM00091 PAS domain bcf_03205 SM00267 diguanylate cyclase bcf_03215 SM00345 helix_turn_helix gluconate operon transcriptional repressor bcf_03215 SM00866 bcf_03215 bcf_03225 SM00642 Alpha-amylase domain bcf_03245 SM00387 Histidine kinase-like ATPases bcf_03250 SM00421 helix_turn_helix, Lux Regulon bcf_03250 SM00448 cheY-homologous receiver domain bcf_03285 SM00382 ATPases associated with a variety of cellular activities bcf_03290 SM00062 Bacterial periplasmic substrate-binding proteins bcf_03290 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. bcf_03340 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain bcf_03340 SM00387 Histidine kinase-like ATPases bcf_03340 SM00388 His Kinase A (phosphoacceptor) domain bcf_03345 SM00448 cheY-homologous receiver domain bcf_03345 SM00862 Transcriptional regulatory protein, C terminal bcf_03385 SM00382 ATPases associated with a variety of cellular activities bcf_03390 SM00382 ATPases associated with a variety of cellular activities bcf_03400 SM00347 helix_turn_helix multiple antibiotic resistance protein bcf_03410 SM00354 helix_turn _helix lactose operon repressor bcf_03425 SM00382 ATPases associated with a variety of cellular activities bcf_03455 SM00829 Enoylreductase bcf_03465 SM00770 Zinc dependent phospholipase C (alpha toxin) bcf_03500 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). bcf_03510 SM00530 Helix-turn-helix XRE-family like proteins bcf_03560 SM00530 Helix-turn-helix XRE-family like proteins bcf_03655 SM00899 bcf_03655 bcf_03800 SM00116 Domain in cystathionine beta-synthase and other proteins. bcf_03820 SM00287 Bacterial SH3 domain homologues bcf_03830 SM00382 ATPases associated with a variety of cellular activities bcf_03915 SM00347 helix_turn_helix multiple antibiotic resistance protein bcf_03940 SM00382 ATPases associated with a variety of cellular activities bcf_03975 SM00640 Glycosyl hydrolases family 32 bcf_03985 SM00354 helix_turn _helix lactose operon repressor bcf_04045 SM00382 ATPases associated with a variety of cellular activities bcf_04055 SM00450 Rhodanese Homology Domain bcf_04065 SM00450 Rhodanese Homology Domain bcf_04070 SM00450 Rhodanese Homology Domain bcf_04070 SM00849 Metallo-beta-lactamase superfamily bcf_04080 SM00450 Rhodanese Homology Domain bcf_04085 SM00450 Rhodanese Homology Domain bcf_04110 SM00829 Enoylreductase bcf_04160 SM00287 Bacterial SH3 domain homologues bcf_04170 SM00382 ATPases associated with a variety of cellular activities bcf_04230 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen bcf_04335 SM00344 helix_turn_helix ASNC type bcf_04385 SM01060 bcf_04385 bcf_04415 SM00382 ATPases associated with a variety of cellular activities bcf_04420 SM00382 ATPases associated with a variety of cellular activities bcf_04425 SM00062 Bacterial periplasmic substrate-binding proteins bcf_04425 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. bcf_04435 SM00382 ATPases associated with a variety of cellular activities bcf_04500 SM00644 bcf_04500 bcf_04505 SM00729 Elongator protein 3, MiaB family, Radical SAM bcf_04545 SM00957 SecA DEAD-like domain bcf_04545 SM00958 SecA preprotein cross-linking domain bcf_04610 SM00646 bcf_04610 bcf_04655 SM00091 PAS domain bcf_04655 SM00387 Histidine kinase-like ATPases bcf_04660 SM00448 cheY-homologous receiver domain bcf_04685 SM00927 DNA mismatch repair enzyme MutH bcf_04690 SM00927 DNA mismatch repair enzyme MutH bcf_04730 SM00422 helix_turn_helix, mercury resistance bcf_04835 SM00347 helix_turn_helix multiple antibiotic resistance protein bcf_04880 SM01120 bcf_04880 bcf_04915 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. bcf_04940 SM00460 Transglutaminase/protease-like homologues bcf_05005 SM00331 Sigma factor PP2C-like phosphatases bcf_05005 SM00448 cheY-homologous receiver domain bcf_05010 SM00138 Methyltransferase, chemotaxis proteins bcf_05015 SM00387 Histidine kinase-like ATPases bcf_05015 SM00388 His Kinase A (phosphoacceptor) domain bcf_05015 SM00448 cheY-homologous receiver domain bcf_05050 SM00829 Enoylreductase bcf_05060 SM00387 Histidine kinase-like ATPases bcf_05065 SM00421 helix_turn_helix, Lux Regulon bcf_05065 SM00448 cheY-homologous receiver domain bcf_05110 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. bcf_05145 SM00028 Tetratricopeptide repeats bcf_05170 SM00530 Helix-turn-helix XRE-family like proteins bcf_05225 SM00347 helix_turn_helix multiple antibiotic resistance protein bcf_05270 SM00347 helix_turn_helix multiple antibiotic resistance protein bcf_05285 SM00382 ATPases associated with a variety of cellular activities bcf_05485 SM00354 helix_turn _helix lactose operon repressor bcf_05495 SM00849 Metallo-beta-lactamase superfamily bcf_05520 SM00725 NEAr Transporter domain bcf_05555 SM00860 SMI1 / KNR4 family bcf_05595 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. bcf_05610 SM00342 helix_turn_helix, arabinose operon control protein bcf_05610 SM00871 Bacterial transcription activator, effector binding domain bcf_05615 SM00387 Histidine kinase-like ATPases bcf_05615 SM00388 His Kinase A (phosphoacceptor) domain bcf_05620 SM00448 cheY-homologous receiver domain bcf_05620 SM00862 Transcriptional regulatory protein, C terminal bcf_05685 SM00357 Cold shock protein domain bcf_05800 SM01060 bcf_05800 bcf_05815 SM00642 Alpha-amylase domain bcf_05820 SM00530 Helix-turn-helix XRE-family like proteins bcf_05830 SM00316 Ribosomal protein S1-like RNA-binding domain bcf_05875 SM00382 ATPases associated with a variety of cellular activities bcf_05875 SM01086 C-terminal, D2-small domain, of ClpB protein bcf_05905 SM00825 Beta-ketoacyl synthase bcf_05950 SM00382 ATPases associated with a variety of cellular activities bcf_05955 SM00382 ATPases associated with a variety of cellular activities bcf_05995 SM00155 Phospholipase D. Active site motifs. bcf_06025 SM01118 bcf_06025 bcf_06035 SM00954 Region found in RelA / SpoT proteins bcf_06190 SM00635 Bacterial Ig-like domain 2 bcf_06305 SM00861 Transketolase, pyrimidine binding domain bcf_06310 SM00530 Helix-turn-helix XRE-family like proteins bcf_06440 SM00382 ATPases associated with a variety of cellular activities bcf_06495 SM00530 Helix-turn-helix XRE-family like proteins bcf_06515 SM00382 ATPases associated with a variety of cellular activities bcf_06535 SM00014 Acid phosphatase homologues bcf_06585 SM00448 cheY-homologous receiver domain bcf_06585 SM00862 Transcriptional regulatory protein, C terminal bcf_06590 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain bcf_06590 SM00387 Histidine kinase-like ATPases bcf_06590 SM00388 His Kinase A (phosphoacceptor) domain bcf_06595 SM00345 helix_turn_helix gluconate operon transcriptional repressor bcf_06595 SM00895 bcf_06595 bcf_06665 SM00822 bcf_06665 bcf_06700 SM00382 ATPases associated with a variety of cellular activities bcf_06725 SM00420 helix_turn_helix, Deoxyribose operon repressor bcf_06725 SM01134 bcf_06725 bcf_06735 SM00365 Leucine-rich repeat, SDS22-like subfamily bcf_06735 SM00369 Leucine-rich repeats, typical (most populated) subfamily bcf_06735 SM00725 NEAr Transporter domain bcf_06740 SM01007 Class II Aldolase and Adducin N-terminal domain bcf_06760 SM00387 Histidine kinase-like ATPases bcf_06760 SM00388 His Kinase A (phosphoacceptor) domain bcf_06765 SM00347 helix_turn_helix multiple antibiotic resistance protein bcf_06785 SM00387 Histidine kinase-like ATPases bcf_06785 SM00388 His Kinase A (phosphoacceptor) domain bcf_06850 SM00507 HNH nucleases bcf_06865 SM00345 helix_turn_helix gluconate operon transcriptional repressor bcf_06870 SM00382 ATPases associated with a variety of cellular activities bcf_06880 SM00382 ATPases associated with a variety of cellular activities bcf_06900 SM00344 helix_turn_helix ASNC type bcf_07020 SM00347 helix_turn_helix multiple antibiotic resistance protein bcf_07090 SM00917 LeuA allosteric (dimerisation) domain bcf_07095 SM01329 bcf_07095 bcf_07280 SM00387 Histidine kinase-like ATPases bcf_07285 SM00448 cheY-homologous receiver domain bcf_07290 SM00421 helix_turn_helix, Lux Regulon bcf_07380 SM00091 PAS domain bcf_07380 SM00387 Histidine kinase-like ATPases bcf_07380 SM00388 His Kinase A (phosphoacceptor) domain bcf_07400 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain bcf_07400 SM00387 Histidine kinase-like ATPases bcf_07400 SM00388 His Kinase A (phosphoacceptor) domain bcf_07450 SM00363 S4 RNA-binding domain bcf_07470 SM00448 cheY-homologous receiver domain bcf_07470 SM00862 Transcriptional regulatory protein, C terminal bcf_07475 SM00091 PAS domain bcf_07475 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain bcf_07475 SM00387 Histidine kinase-like ATPases bcf_07475 SM00388 His Kinase A (phosphoacceptor) domain bcf_07485 SM00257 Lysin motif bcf_07515 SM00487 DEAD-like helicases superfamily bcf_07515 SM00490 helicase superfamily c-terminal domain bcf_07525 SM00257 Lysin motif bcf_07535 SM00422 helix_turn_helix, mercury resistance bcf_07550 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase bcf_07565 SM00644 bcf_07565 bcf_07575 SM00870 bcf_07575 bcf_07585 SM00316 Ribosomal protein S1-like RNA-binding domain bcf_07590 SM01240 bcf_07590 bcf_07645 SM00411 bacterial (prokaryotic) histone like domain bcf_07670 SM00562 bcf_07670 bcf_07690 SM00028 Tetratricopeptide repeats bcf_07695 SM00914 bcf_07695 bcf_07740 SM00986 Uracil DNA glycosylase superfamily bcf_07740 SM00987 UreE urease accessory protein, C-terminal domain bcf_07760 SM00851 MGS-like domain bcf_07805 SM00479 bcf_07805 bcf_07805 SM00491 bcf_07805 bcf_07830 SM00478 endonuclease III bcf_07830 SM00525 bcf_07830 bcf_07840 SM00060 Fibronectin type 3 domain bcf_07900 SM00981 bcf_07900 bcf_07910 SM00491 bcf_07910 bcf_07975 SM00450 Rhodanese Homology Domain bcf_08005 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs bcf_08005 SM00475 5'-3' exonuclease bcf_08070 SM00357 Cold shock protein domain bcf_08120 SM00849 Metallo-beta-lactamase superfamily bcf_08125 SM00422 helix_turn_helix, mercury resistance bcf_08125 SM00871 Bacterial transcription activator, effector binding domain bcf_08220 SM00448 cheY-homologous receiver domain bcf_08225 SM00073 Histidine Phosphotransfer domain bcf_08225 SM00260 Two component signalling adaptor domain bcf_08225 SM00387 Histidine kinase-like ATPases bcf_08225 SM01231 bcf_08225 bcf_08245 SM00138 Methyltransferase, chemotaxis proteins bcf_08320 SM00382 ATPases associated with a variety of cellular activities bcf_08355 SM00260 Two component signalling adaptor domain bcf_08355 SM00448 cheY-homologous receiver domain bcf_08435 SM00382 ATPases associated with a variety of cellular activities bcf_08435 SM00962 SRP54-type protein, GTPase domain bcf_08445 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain bcf_08515 SM00530 Helix-turn-helix XRE-family like proteins bcf_08535 SM00382 ATPases associated with a variety of cellular activities bcf_08550 SM00849 Metallo-beta-lactamase superfamily bcf_08550 SM01027 Beta-Casp domain bcf_08575 SM00835 Cupin bcf_08590 SM00855 Phosphoglycerate mutase family bcf_08610 SM00347 helix_turn_helix multiple antibiotic resistance protein bcf_08650 SM00345 helix_turn_helix gluconate operon transcriptional repressor bcf_08650 SM00895 bcf_08650 bcf_08660 SM00833 Cobalamin synthesis protein cobW C-terminal domain bcf_08755 SM00530 Helix-turn-helix XRE-family like proteins bcf_08795 SM00421 helix_turn_helix, Lux Regulon bcf_08795 SM00448 cheY-homologous receiver domain bcf_08805 SM00382 ATPases associated with a variety of cellular activities bcf_08820 SM00155 Phospholipase D. Active site motifs. bcf_08840 SM00919 Malic enzyme, NAD binding domain bcf_08840 SM01274 bcf_08840 bcf_08845 SM00387 Histidine kinase-like ATPases bcf_08850 SM00448 cheY-homologous receiver domain bcf_08855 SM00487 DEAD-like helicases superfamily bcf_08855 SM00490 helicase superfamily c-terminal domain bcf_08875 SM00530 Helix-turn-helix XRE-family like proteins bcf_08905 SM00646 bcf_08905 bcf_08910 SM00047 Lysozyme subfamily 2 bcf_09085 SM00854 Bacterial capsule synthesis protein PGA_cap bcf_09125 SM00850 LytTr DNA-binding domain bcf_09160 SM00860 SMI1 / KNR4 family bcf_09195 SM00729 Elongator protein 3, MiaB family, Radical SAM bcf_09205 SM00448 cheY-homologous receiver domain bcf_09205 SM00862 Transcriptional regulatory protein, C terminal bcf_09210 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain bcf_09210 SM00387 Histidine kinase-like ATPases bcf_09210 SM00388 His Kinase A (phosphoacceptor) domain bcf_09230 SM00450 Rhodanese Homology Domain bcf_09280 SM00382 ATPases associated with a variety of cellular activities bcf_09305 SM00448 cheY-homologous receiver domain bcf_09305 SM00862 Transcriptional regulatory protein, C terminal bcf_09310 SM00387 Histidine kinase-like ATPases bcf_09310 SM00388 His Kinase A (phosphoacceptor) domain bcf_09320 SM01133 bcf_09320 bcf_09335 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain bcf_09365 SM01011 Aminopeptidase P, N-terminal domain bcf_09375 SM00287 Bacterial SH3 domain homologues bcf_09385 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain bcf_09385 SM00437 Bacterial DNA topoisomerase I DNA-binding domain bcf_09385 SM00493 bcf_09385 bcf_09485 SM00833 Cobalamin synthesis protein cobW C-terminal domain bcf_09520 SM00382 ATPases associated with a variety of cellular activities bcf_09525 SM00382 ATPases associated with a variety of cellular activities bcf_09560 SM00347 helix_turn_helix multiple antibiotic resistance protein bcf_09580 SM00382 ATPases associated with a variety of cellular activities bcf_09585 SM00382 ATPases associated with a variety of cellular activities bcf_09620 SM00287 Bacterial SH3 domain homologues bcf_09630 SM00382 ATPases associated with a variety of cellular activities bcf_09635 SM00448 cheY-homologous receiver domain bcf_09635 SM00862 Transcriptional regulatory protein, C terminal bcf_09640 SM00387 Histidine kinase-like ATPases bcf_09640 SM00388 His Kinase A (phosphoacceptor) domain bcf_09720 SM00448 cheY-homologous receiver domain bcf_09720 SM00862 Transcriptional regulatory protein, C terminal bcf_09725 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain bcf_09725 SM00387 Histidine kinase-like ATPases bcf_09725 SM00388 His Kinase A (phosphoacceptor) domain bcf_09795 SM00345 helix_turn_helix gluconate operon transcriptional repressor bcf_09820 SM00460 Transglutaminase/protease-like homologues bcf_09845 SM00966 SpoVT / AbrB like domain bcf_09855 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor bcf_09890 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). bcf_09890 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain bcf_09950 SM00833 Cobalamin synthesis protein cobW C-terminal domain bcf_10020 SM00855 Phosphoglycerate mutase family bcf_10070 SM00155 Phospholipase D. Active site motifs. bcf_10095 SM01091 Transporter associated domain bcf_10165 SM00244 prohibitin homologues bcf_10175 SM00346 helix_turn_helix isocitrate lyase regulation bcf_10210 SM00859 Semialdehyde dehydrogenase, NAD binding domain bcf_10230 SM00855 Phosphoglycerate mutase family bcf_10245 SM01005 Alanine racemase, C-terminal domain bcf_10275 SM00345 helix_turn_helix gluconate operon transcriptional repressor bcf_10425 SM00487 DEAD-like helicases superfamily bcf_10425 SM00490 helicase superfamily c-terminal domain bcf_10445 SM00829 Enoylreductase bcf_10465 SM00849 Metallo-beta-lactamase superfamily bcf_10480 SM00460 Transglutaminase/protease-like homologues bcf_10505 SM00926 Molybdopterin oxidoreductase Fe4S4 domain bcf_10525 SM00100 Cyclic nucleotide-monophosphate binding domain bcf_10525 SM00419 helix_turn_helix, cAMP Regulatory protein bcf_10530 SM00729 Elongator protein 3, MiaB family, Radical SAM bcf_10540 SM00852 Probable molybdopterin binding domain bcf_10685 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. bcf_10690 SM00382 ATPases associated with a variety of cellular activities bcf_10725 SM00857 Resolvase, N terminal domain bcf_10750 SM00347 helix_turn_helix multiple antibiotic resistance protein bcf_10760 SM01209 bcf_10760 bcf_10780 SM00028 Tetratricopeptide repeats bcf_10790 SM00028 Tetratricopeptide repeats bcf_10790 SM00530 Helix-turn-helix XRE-family like proteins bcf_10795 SM00729 Elongator protein 3, MiaB family, Radical SAM bcf_10825 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor bcf_10835 SM00226 Low molecular weight phosphatase family bcf_10845 SM00382 ATPases associated with a variety of cellular activities bcf_10865 SM00530 Helix-turn-helix XRE-family like proteins bcf_10890 SM00567 E-Z type HEAT repeats bcf_10890 SM00932 Scaffold protein Nfu/NifU N terminal bcf_10910 SM00836 DALR anticodon binding domain bcf_10910 SM01016 Arginyl tRNA synthetase N terminal dom bcf_10925 SM00028 Tetratricopeptide repeats bcf_10955 SM00327 von Willebrand factor (vWF) type A domain bcf_10970 SM00382 ATPases associated with a variety of cellular activities bcf_10980 SM00028 Tetratricopeptide repeats bcf_11010 SM00857 Resolvase, N terminal domain bcf_11095 SM00448 cheY-homologous receiver domain bcf_11095 SM00862 Transcriptional regulatory protein, C terminal bcf_11100 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain bcf_11100 SM00387 Histidine kinase-like ATPases bcf_11100 SM00388 His Kinase A (phosphoacceptor) domain bcf_11175 SM00382 ATPases associated with a variety of cellular activities bcf_11240 SM00563 Phosphate acyltransferases bcf_11300 SM00014 Acid phosphatase homologues bcf_11350 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. bcf_11355 SM00421 helix_turn_helix, Lux Regulon bcf_11355 SM00448 cheY-homologous receiver domain bcf_11365 SM00829 Enoylreductase bcf_11420 SM00382 ATPases associated with a variety of cellular activities bcf_11460 SM01091 Transporter associated domain bcf_11475 SM00387 Histidine kinase-like ATPases bcf_11475 SM00388 His Kinase A (phosphoacceptor) domain bcf_11495 SM00882 Coenzyme A transferase bcf_11500 SM00882 Coenzyme A transferase bcf_11515 SM00382 ATPases associated with a variety of cellular activities bcf_11555 SM00219 Tyrosine kinase, catalytic domain bcf_11565 SM00014 Acid phosphatase homologues bcf_11615 SM00754 A domain in the BMP inhibitor chordin and in microbial proteins. bcf_11760 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor bcf_11800 SM00823 Phosphopantetheine attachment site bcf_11800 SM00824 Thioesterase bcf_11805 SM00923 MbtH-like protein bcf_11825 SM00411 bacterial (prokaryotic) histone like domain bcf_11865 SM00363 S4 RNA-binding domain bcf_11875 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain bcf_11885 SM00382 ATPases associated with a variety of cellular activities bcf_11935 SM00849 Metallo-beta-lactamase superfamily bcf_11970 SM00849 Metallo-beta-lactamase superfamily bcf_11990 SM01059 Chloramphenicol acetyltransferase bcf_12015 SM00530 Helix-turn-helix XRE-family like proteins bcf_12060 SM00357 Cold shock protein domain bcf_12090 SM00859 Semialdehyde dehydrogenase, NAD binding domain bcf_12125 SM00382 ATPases associated with a variety of cellular activities bcf_12130 SM00382 ATPases associated with a variety of cellular activities bcf_12135 SM00646 bcf_12135 bcf_12145 SM00530 Helix-turn-helix XRE-family like proteins bcf_12180 SM00835 Cupin bcf_12185 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. bcf_12260 SM01207 bcf_12260 bcf_12300 SM00849 Metallo-beta-lactamase superfamily bcf_12315 SM00487 DEAD-like helicases superfamily bcf_12315 SM00490 helicase superfamily c-terminal domain bcf_12345 SM00382 ATPases associated with a variety of cellular activities bcf_12410 SM00110 Complement component C1q domain. bcf_12460 SM00347 helix_turn_helix multiple antibiotic resistance protein bcf_12465 SM00855 Phosphoglycerate mutase family bcf_12520 SM00936 Penicillin-binding protein 5, C-terminal domain bcf_12565 SM00354 helix_turn _helix lactose operon repressor bcf_12645 SM00530 Helix-turn-helix XRE-family like proteins bcf_12665 SM00646 bcf_12665 bcf_12685 SM00382 ATPases associated with a variety of cellular activities bcf_12695 SM00052 Putative diguanylate phosphodiesterase bcf_12695 SM00091 PAS domain bcf_12695 SM00267 diguanylate cyclase bcf_12705 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). bcf_12705 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain bcf_12705 SM00319 Homologues of the ligand binding domain of Tar bcf_12725 SM00450 Rhodanese Homology Domain bcf_12725 SM00849 Metallo-beta-lactamase superfamily bcf_12755 SM00878 Biotin carboxylase C-terminal domain bcf_12820 SM00387 Histidine kinase-like ATPases bcf_12820 SM00388 His Kinase A (phosphoacceptor) domain bcf_12825 SM00448 cheY-homologous receiver domain bcf_12825 SM00862 Transcriptional regulatory protein, C terminal bcf_12880 SM00382 ATPases associated with a variety of cellular activities bcf_12900 SM00422 helix_turn_helix, mercury resistance bcf_12900 SM00871 Bacterial transcription activator, effector binding domain bcf_12950 SM00345 helix_turn_helix gluconate operon transcriptional repressor bcf_13025 SM00448 cheY-homologous receiver domain bcf_13025 SM00862 Transcriptional regulatory protein, C terminal bcf_13030 SM00387 Histidine kinase-like ATPases bcf_13045 SM00382 ATPases associated with a variety of cellular activities bcf_13065 SM00382 ATPases associated with a variety of cellular activities bcf_13095 SM00345 helix_turn_helix gluconate operon transcriptional repressor bcf_13105 SM00345 helix_turn_helix gluconate operon transcriptional repressor bcf_13165 SM00480 DNA polymerase III beta subunit bcf_13260 SM00465 GIY-YIG type nucleases (URI domain) bcf_13340 SM00014 Acid phosphatase homologues bcf_13350 SM00642 Alpha-amylase domain bcf_13375 SM00871 Bacterial transcription activator, effector binding domain bcf_13400 SM00345 helix_turn_helix gluconate operon transcriptional repressor bcf_13515 SM00382 ATPases associated with a variety of cellular activities bcf_13535 SM00420 helix_turn_helix, Deoxyribose operon repressor bcf_13535 SM01134 bcf_13535 bcf_13580 SM00861 Transketolase, pyrimidine binding domain bcf_13645 SM00116 Domain in cystathionine beta-synthase and other proteins. bcf_13645 SM00382 ATPases associated with a variety of cellular activities bcf_13680 SM00060 Fibronectin type 3 domain bcf_13680 SM00495 Chitin-binding domain type 3 bcf_13715 SM00849 Metallo-beta-lactamase superfamily bcf_13785 SM00341 Helicase and RNase D C-terminal bcf_13785 SM00487 DEAD-like helicases superfamily bcf_13785 SM00490 helicase superfamily c-terminal domain bcf_13785 SM00956 bcf_13785 bcf_13830 SM01131 bcf_13830 bcf_13860 SM01130 bcf_13860 bcf_13880 SM00091 PAS domain bcf_13880 SM00382 ATPases associated with a variety of cellular activities bcf_13945 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain bcf_13990 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain bcf_13995 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain bcf_13995 SM00387 Histidine kinase-like ATPases bcf_13995 SM00388 His Kinase A (phosphoacceptor) domain bcf_14000 SM00448 cheY-homologous receiver domain bcf_14000 SM00862 Transcriptional regulatory protein, C terminal bcf_14040 SM00344 helix_turn_helix ASNC type bcf_14200 SM00382 ATPases associated with a variety of cellular activities bcf_14205 SM00345 helix_turn_helix gluconate operon transcriptional repressor bcf_14260 SM00062 Bacterial periplasmic substrate-binding proteins bcf_14265 SM00382 ATPases associated with a variety of cellular activities bcf_14285 SM00028 Tetratricopeptide repeats bcf_14385 SM00382 ATPases associated with a variety of cellular activities bcf_14430 SM00830 Chorismate mutase type II bcf_14470 SM00287 Bacterial SH3 domain homologues bcf_14495 SM00091 PAS domain bcf_14495 SM00382 ATPases associated with a variety of cellular activities bcf_14525 SM00382 ATPases associated with a variety of cellular activities bcf_14545 SM01133 bcf_14545 bcf_14585 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor bcf_14605 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase bcf_14630 SM00346 helix_turn_helix isocitrate lyase regulation bcf_14650 SM00098 Alkaline phosphatase homologues bcf_14660 SM00530 Helix-turn-helix XRE-family like proteins bcf_14685 SM00850 LytTr DNA-binding domain bcf_14775 SM01060 bcf_14775 bcf_14805 SM00860 SMI1 / KNR4 family bcf_14820 SM00347 helix_turn_helix multiple antibiotic resistance protein bcf_14825 SM00889 Elongation factor G, domain IV bcf_14850 SM00382 ATPases associated with a variety of cellular activities bcf_14855 SM00345 helix_turn_helix gluconate operon transcriptional repressor bcf_14860 SM00860 SMI1 / KNR4 family bcf_14870 SM00382 ATPases associated with a variety of cellular activities bcf_14900 SM00342 helix_turn_helix, arabinose operon control protein bcf_14900 SM00871 Bacterial transcription activator, effector binding domain bcf_14925 SM00345 helix_turn_helix gluconate operon transcriptional repressor bcf_15050 SM00797 Allophanate hydrolase subunit 2 bcf_15055 SM00796 Allophanate hydrolase subunit 1 bcf_15060 SM00346 helix_turn_helix isocitrate lyase regulation bcf_15085 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor bcf_15160 SM00849 Metallo-beta-lactamase superfamily bcf_15235 SM00870 bcf_15235 bcf_15240 SM00530 Helix-turn-helix XRE-family like proteins bcf_15275 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) bcf_15275 SM00091 PAS domain bcf_15275 SM00387 Histidine kinase-like ATPases bcf_15275 SM00388 His Kinase A (phosphoacceptor) domain bcf_15300 SM00342 helix_turn_helix, arabinose operon control protein bcf_15335 SM00919 Malic enzyme, NAD binding domain bcf_15335 SM01274 bcf_15335 bcf_15365 SM00448 cheY-homologous receiver domain bcf_15370 SM00387 Histidine kinase-like ATPases bcf_15475 SM00347 helix_turn_helix multiple antibiotic resistance protein bcf_15485 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain bcf_15485 SM00387 Histidine kinase-like ATPases bcf_15485 SM00388 His Kinase A (phosphoacceptor) domain bcf_15490 SM00448 cheY-homologous receiver domain bcf_15490 SM00862 Transcriptional regulatory protein, C terminal bcf_15570 SM00382 ATPases associated with a variety of cellular activities bcf_15585 SM00421 helix_turn_helix, Lux Regulon bcf_15585 SM00448 cheY-homologous receiver domain bcf_15600 SM00382 ATPases associated with a variety of cellular activities bcf_15620 SM00226 Low molecular weight phosphatase family bcf_15635 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor bcf_15645 SM00028 Tetratricopeptide repeats bcf_15715 SM00448 cheY-homologous receiver domain bcf_15715 SM00862 Transcriptional regulatory protein, C terminal bcf_15720 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain bcf_15720 SM00387 Histidine kinase-like ATPases bcf_15720 SM00388 His Kinase A (phosphoacceptor) domain bcf_15775 SM00849 Metallo-beta-lactamase superfamily bcf_15875 SM00382 ATPases associated with a variety of cellular activities bcf_15885 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor bcf_15895 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain bcf_15895 SM00387 Histidine kinase-like ATPases bcf_15895 SM00388 His Kinase A (phosphoacceptor) domain bcf_15900 SM00448 cheY-homologous receiver domain bcf_15900 SM00862 Transcriptional regulatory protein, C terminal bcf_15910 SM00347 helix_turn_helix multiple antibiotic resistance protein bcf_15955 SM00450 Rhodanese Homology Domain bcf_15955 SM00849 Metallo-beta-lactamase superfamily bcf_15990 SM00387 Histidine kinase-like ATPases bcf_15990 SM00388 His Kinase A (phosphoacceptor) domain bcf_15995 SM00448 cheY-homologous receiver domain bcf_15995 SM00862 Transcriptional regulatory protein, C terminal bcf_16010 SM00860 SMI1 / KNR4 family bcf_16055 SM00354 helix_turn _helix lactose operon repressor bcf_16060 SM00028 Tetratricopeptide repeats bcf_16090 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). bcf_16090 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain bcf_16090 SM00319 Homologues of the ligand binding domain of Tar bcf_16140 SM00344 helix_turn_helix ASNC type bcf_16190 SM00342 helix_turn_helix, arabinose operon control protein bcf_16200 SM00860 SMI1 / KNR4 family bcf_16220 SM00287 Bacterial SH3 domain homologues bcf_16220 SM00644 bcf_16220 bcf_16270 SM00347 helix_turn_helix multiple antibiotic resistance protein bcf_16295 SM00382 ATPases associated with a variety of cellular activities bcf_16305 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor bcf_16375 SM00382 ATPases associated with a variety of cellular activities bcf_16425 SM00422 helix_turn_helix, mercury resistance bcf_16440 SM00530 Helix-turn-helix XRE-family like proteins bcf_16450 SM00345 helix_turn_helix gluconate operon transcriptional repressor bcf_16475 SM00387 Histidine kinase-like ATPases bcf_16475 SM00421 helix_turn_helix, Lux Regulon bcf_16475 SM00448 cheY-homologous receiver domain bcf_16535 SM00382 ATPases associated with a variety of cellular activities bcf_16550 SM00530 Helix-turn-helix XRE-family like proteins bcf_16620 SM01266 bcf_16620 bcf_16660 SM00028 Tetratricopeptide repeats bcf_16685 SM01091 Transporter associated domain bcf_16690 SM00422 helix_turn_helix, mercury resistance bcf_16730 SM01350 bcf_16730 bcf_16735 SM00861 Transketolase, pyrimidine binding domain bcf_16760 SM00829 Enoylreductase bcf_16795 SM00914 bcf_16795 bcf_16815 SM00345 helix_turn_helix gluconate operon transcriptional repressor bcf_16815 SM00866 bcf_16815 bcf_16835 SM00849 Metallo-beta-lactamase superfamily bcf_16885 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor bcf_16890 SM00636 bcf_16890 bcf_16975 SM00382 ATPases associated with a variety of cellular activities bcf_17010 SM00849 Metallo-beta-lactamase superfamily bcf_17015 SM00641 Glycosyl hydrolases family 25 bcf_17080 SM00849 Metallo-beta-lactamase superfamily bcf_17090 SM00829 Enoylreductase bcf_17195 SM00829 Enoylreductase bcf_17200 SM00855 Phosphoglycerate mutase family bcf_17210 SM00533 DNA-binding domain of DNA mismatch repair MUTS family bcf_17210 SM00534 ATPase domain of DNA mismatch repair MUTS family bcf_17225 SM00642 Alpha-amylase domain bcf_17300 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor bcf_17305 SM00829 Enoylreductase bcf_17315 SM00028 Tetratricopeptide repeats bcf_17385 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins bcf_17430 SM00479 bcf_17430 bcf_17435 SM00357 Cold shock protein domain bcf_17555 SM00530 Helix-turn-helix XRE-family like proteins bcf_17675 SM00852 Probable molybdopterin binding domain bcf_17690 SM00729 Elongator protein 3, MiaB family, Radical SAM bcf_17710 SM00926 Molybdopterin oxidoreductase Fe4S4 domain bcf_17710 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region bcf_17815 SM00382 ATPases associated with a variety of cellular activities bcf_17835 SM00434 DNA Topoisomerase IV bcf_17840 SM00387 Histidine kinase-like ATPases bcf_17840 SM00433 TopoisomeraseII bcf_17845 SM00881 CoA binding domain bcf_17850 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. bcf_17855 SM00448 cheY-homologous receiver domain bcf_17855 SM00862 Transcriptional regulatory protein, C terminal bcf_17880 SM01207 bcf_17880 bcf_17895 SM00257 Lysin motif bcf_17895 SM00636 bcf_17895 bcf_17915 SM00479 bcf_17915 bcf_17935 SM00382 ATPases associated with a variety of cellular activities bcf_17980 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain bcf_18050 SM00644 bcf_18050 bcf_18050 SM00701 Animal peptidoglycan recognition proteins homologous to Bacteriophage T3 lysozyme. bcf_18055 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain bcf_18070 SM00091 PAS domain bcf_18070 SM00387 Histidine kinase-like ATPases bcf_18070 SM00388 His Kinase A (phosphoacceptor) domain bcf_18100 SM01058 CarD-like/TRCF domain bcf_18215 SM00382 ATPases associated with a variety of cellular activities bcf_18260 SM00644 bcf_18260 bcf_18275 SM00382 ATPases associated with a variety of cellular activities bcf_18280 SM00382 ATPases associated with a variety of cellular activities bcf_18295 SM00861 Transketolase, pyrimidine binding domain bcf_18310 SM00382 ATPases associated with a variety of cellular activities bcf_18315 SM00062 Bacterial periplasmic substrate-binding proteins bcf_18330 SM00857 Resolvase, N terminal domain bcf_18360 SM01230 bcf_18360 bcf_18365 SM00422 helix_turn_helix, mercury resistance bcf_18390 SM00382 ATPases associated with a variety of cellular activities bcf_18420 SM00287 Bacterial SH3 domain homologues bcf_18435 SM00420 helix_turn_helix, Deoxyribose operon repressor bcf_18435 SM01134 bcf_18435 bcf_18465 SM00636 bcf_18465 bcf_18485 SM00411 bacterial (prokaryotic) histone like domain bcf_18515 SM00382 ATPases associated with a variety of cellular activities bcf_18545 SM00342 helix_turn_helix, arabinose operon control protein bcf_18555 SM00478 endonuclease III bcf_18595 SM00052 Putative diguanylate phosphodiesterase bcf_18595 SM00091 PAS domain bcf_18595 SM00267 diguanylate cyclase bcf_18630 SM00345 helix_turn_helix gluconate operon transcriptional repressor bcf_18650 SM00148 Phospholipase C, catalytic domain (part); domain X bcf_18665 SM00257 Lysin motif bcf_18695 SM00853 MutL C terminal dimerisation domain bcf_18695 SM01340 bcf_18695 bcf_18700 SM00533 DNA-binding domain of DNA mismatch repair MUTS family bcf_18700 SM00534 ATPase domain of DNA mismatch repair MUTS family bcf_18715 SM00729 Elongator protein 3, MiaB family, Radical SAM bcf_18745 SM00322 K homology RNA-binding domain bcf_18745 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. bcf_18750 SM00382 ATPases associated with a variety of cellular activities bcf_18755 SM00852 Probable molybdopterin binding domain bcf_18810 SM00382 ATPases associated with a variety of cellular activities bcf_18825 SM00345 helix_turn_helix gluconate operon transcriptional repressor bcf_18825 SM00866 bcf_18825 bcf_18830 SM00382 ATPases associated with a variety of cellular activities bcf_18830 SM00843 bcf_18830 bcf_18845 SM00849 Metallo-beta-lactamase superfamily bcf_18855 SM01130 bcf_18855 bcf_18865 SM00859 Semialdehyde dehydrogenase, NAD binding domain bcf_18895 SM00316 Ribosomal protein S1-like RNA-binding domain bcf_18895 SM00322 K homology RNA-binding domain bcf_18900 SM01387 bcf_18900 bcf_18905 SM00904 Riboflavin kinase bcf_18940 SM00316 Ribosomal protein S1-like RNA-binding domain bcf_18940 SM00322 K homology RNA-binding domain bcf_18955 SM00507 HNH nucleases bcf_18960 SM00479 bcf_18960 bcf_18960 SM00481 DNA polymerase alpha chain like domain bcf_18970 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. bcf_19015 SM00382 ATPases associated with a variety of cellular activities bcf_19015 SM01086 C-terminal, D2-small domain, of ClpB protein bcf_19035 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain bcf_19035 SM00437 Bacterial DNA topoisomerase I DNA-binding domain bcf_19035 SM00493 bcf_19035 bcf_19045 SM00881 CoA binding domain bcf_19090 SM00382 ATPases associated with a variety of cellular activities bcf_19090 SM00962 SRP54-type protein, GTPase domain bcf_19090 SM00963 SRP54-type protein, helical bundle domain bcf_19100 SM00382 ATPases associated with a variety of cellular activities bcf_19100 SM00962 SRP54-type protein, GTPase domain bcf_19100 SM00963 SRP54-type protein, helical bundle domain bcf_19105 SM00968 SMC proteins Flexible Hinge Domain bcf_19110 SM00358 Double-stranded RNA binding motif bcf_19110 SM00535 Ribonuclease III family bcf_19130 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. bcf_19145 SM00487 DEAD-like helicases superfamily bcf_19145 SM00490 helicase superfamily c-terminal domain bcf_19150 SM01120 bcf_19150 bcf_19150 SM01121 bcf_19150 bcf_19165 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain bcf_19180 SM00220 Serine/Threonine protein kinases, catalytic domain bcf_19180 SM00740 bcf_19180 bcf_19185 SM00331 Sigma factor PP2C-like phosphatases bcf_19185 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain bcf_19210 SM00487 DEAD-like helicases superfamily bcf_19210 SM00490 helicase superfamily c-terminal domain bcf_19220 SM01409 bcf_19220 bcf_19225 SM00072 Guanylate kinase homologues. bcf_19240 SM00831 Cation transporter/ATPase, N-terminus bcf_19290 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family bcf_19305 SM00851 MGS-like domain bcf_19305 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain bcf_19305 SM01209 bcf_19305 bcf_19310 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain bcf_19335 SM00363 S4 RNA-binding domain bcf_19360 SM00363 S4 RNA-binding domain bcf_19405 SM00864 Tubulin/FtsZ family, GTPase domain bcf_19405 SM00865 Tubulin/FtsZ family, C-terminal domain bcf_19410 SM00842 Cell division protein FtsA bcf_19450 SM00740 bcf_19450 bcf_19455 SM00740 bcf_19455 bcf_19485 SM00717 SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains bcf_19505 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. bcf_19545 SM00855 Phosphoglycerate mutase family bcf_19610 SM00878 Biotin carboxylase C-terminal domain bcf_19630 SM00670 Large family of predicted nucleotide-binding domains bcf_19655 SM00838 Elongation factor G C-terminus bcf_19730 SM00861 Transketolase, pyrimidine binding domain bcf_19760 SM00849 Metallo-beta-lactamase superfamily bcf_19830 SM00052 Putative diguanylate phosphodiesterase bcf_19875 SM00267 diguanylate cyclase bcf_19920 SM00387 Histidine kinase-like ATPases bcf_19920 SM00388 His Kinase A (phosphoacceptor) domain bcf_19935 SM00354 helix_turn _helix lactose operon repressor bcf_19960 SM00642 Alpha-amylase domain bcf_19965 SM00642 Alpha-amylase domain bcf_19970 SM00382 ATPases associated with a variety of cellular activities bcf_20005 SM00382 ATPases associated with a variety of cellular activities bcf_20085 SM01007 Class II Aldolase and Adducin N-terminal domain bcf_20110 SM00267 diguanylate cyclase bcf_20145 SM01061 CAT RNA binding domain bcf_20155 SM00345 helix_turn_helix gluconate operon transcriptional repressor bcf_20155 SM00866 bcf_20155 bcf_20170 SM00849 Metallo-beta-lactamase superfamily bcf_20265 SM00387 Histidine kinase-like ATPases bcf_20275 SM00936 Penicillin-binding protein 5, C-terminal domain bcf_20280 SM00345 helix_turn_helix gluconate operon transcriptional repressor bcf_20285 SM00382 ATPases associated with a variety of cellular activities bcf_20305 SM00347 helix_turn_helix multiple antibiotic resistance protein bcf_20325 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain bcf_20420 SM00354 helix_turn _helix lactose operon repressor bcf_20440 SM00704 CDGSH-type zinc finger. Function unknown. bcf_20470 SM00729 Elongator protein 3, MiaB family, Radical SAM bcf_20470 SM00876 Biotin and Thiamin Synthesis associated domain bcf_20525 SM00347 helix_turn_helix multiple antibiotic resistance protein bcf_20560 SM00859 Semialdehyde dehydrogenase, NAD binding domain bcf_20575 SM00849 Metallo-beta-lactamase superfamily bcf_20600 SM00849 Metallo-beta-lactamase superfamily bcf_20640 SM00382 ATPases associated with a variety of cellular activities bcf_20650 SM00062 Bacterial periplasmic substrate-binding proteins bcf_20650 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. bcf_20680 SM00861 Transketolase, pyrimidine binding domain bcf_20700 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase bcf_20710 SM00091 PAS domain bcf_20710 SM00382 ATPases associated with a variety of cellular activities bcf_20735 SM00448 cheY-homologous receiver domain bcf_20740 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. bcf_20755 SM00363 S4 RNA-binding domain bcf_20760 SM00861 Transketolase, pyrimidine binding domain bcf_20795 SM00878 Biotin carboxylase C-terminal domain bcf_20845 SM00382 ATPases associated with a variety of cellular activities bcf_20860 SM00841 Elongation factor P, C-terminal bcf_20860 SM01185 bcf_20860 bcf_20895 SM00529 Helix-turn-helix diphteria tox regulatory element bcf_20930 SM00450 Rhodanese Homology Domain bcf_20935 SM00354 helix_turn _helix lactose operon repressor bcf_20985 SM00382 ATPases associated with a variety of cellular activities bcf_20990 SM00345 helix_turn_helix gluconate operon transcriptional repressor bcf_21020 SM00487 DEAD-like helicases superfamily bcf_21020 SM00490 helicase superfamily c-terminal domain bcf_21065 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. bcf_21100 SM00382 ATPases associated with a variety of cellular activities bcf_21150 SM01018 B12 binding domain bcf_21175 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor bcf_21185 SM00849 Metallo-beta-lactamase superfamily bcf_21225 SM00382 ATPases associated with a variety of cellular activities bcf_21290 SM00382 ATPases associated with a variety of cellular activities bcf_21305 SM00518 AP endonuclease family 2 bcf_21310 SM00487 DEAD-like helicases superfamily bcf_21310 SM00490 helicase superfamily c-terminal domain bcf_21345 SM00400 zinc finger bcf_21345 SM00493 bcf_21345 bcf_21345 SM00766 DNA primase DnaG DnaB-binding bcf_21365 SM00116 Domain in cystathionine beta-synthase and other proteins. bcf_21400 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. bcf_21430 SM00729 Elongator protein 3, MiaB family, Radical SAM bcf_21445 SM00271 DnaJ molecular chaperone homology domain bcf_21465 SM00729 Elongator protein 3, MiaB family, Radical SAM bcf_21475 SM00838 Elongation factor G C-terminus bcf_21510 SM00849 Metallo-beta-lactamase superfamily bcf_21520 SM00278 Helix-hairpin-helix DNA-binding motif class 1 bcf_21540 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. bcf_21550 SM01103 bcf_21550 bcf_21605 SM00954 Region found in RelA / SpoT proteins bcf_21615 SM00098 Alkaline phosphatase homologues bcf_21645 SM00855 Phosphoglycerate mutase family bcf_21695 SM00530 Helix-turn-helix XRE-family like proteins bcf_21720 SM00382 ATPases associated with a variety of cellular activities bcf_21815 SM00732 Likely ribonuclease with RNase H fold. bcf_21825 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain bcf_21860 SM00028 Tetratricopeptide repeats bcf_21880 SM00382 ATPases associated with a variety of cellular activities bcf_21915 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. bcf_21915 SM00954 Region found in RelA / SpoT proteins bcf_21960 SM01323 bcf_21960 bcf_21985 SM00382 ATPases associated with a variety of cellular activities bcf_21990 SM00278 Helix-hairpin-helix DNA-binding motif class 1 bcf_22010 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor bcf_22025 SM00257 Lysin motif bcf_22075 SM00382 ATPases associated with a variety of cellular activities bcf_22080 SM00387 Histidine kinase-like ATPases bcf_22085 SM00448 cheY-homologous receiver domain bcf_22085 SM00862 Transcriptional regulatory protein, C terminal bcf_22095 SM01317 bcf_22095 bcf_22185 SM00382 ATPases associated with a variety of cellular activities bcf_22255 SM00487 DEAD-like helicases superfamily bcf_22310 SM00257 Lysin motif bcf_22320 SM01004 Delta-aminolevulinic acid dehydratase bcf_22345 SM00347 helix_turn_helix multiple antibiotic resistance protein bcf_22360 SM00382 ATPases associated with a variety of cellular activities bcf_22360 SM00464 Found in ATP-dependent protease La (LON) bcf_22365 SM00382 ATPases associated with a variety of cellular activities bcf_22370 SM00382 ATPases associated with a variety of cellular activities bcf_22370 SM00994 ClpX C4-type zinc finger bcf_22370 SM01086 C-terminal, D2-small domain, of ClpB protein bcf_22435 SM00909 Sporulation and spore germination bcf_22475 SM00421 helix_turn_helix, Lux Regulon bcf_22515 SM00382 ATPases associated with a variety of cellular activities bcf_22520 SM00382 ATPases associated with a variety of cellular activities bcf_22525 SM00342 helix_turn_helix, arabinose operon control protein bcf_22525 SM00448 cheY-homologous receiver domain bcf_22540 SM00530 Helix-turn-helix XRE-family like proteins bcf_22570 SM00382 ATPases associated with a variety of cellular activities bcf_22620 SM00465 GIY-YIG type nucleases (URI domain) bcf_22630 SM00893 Electron transfer flavoprotein domain bcf_22635 SM00893 Electron transfer flavoprotein domain bcf_22700 SM00382 ATPases associated with a variety of cellular activities bcf_22705 SM00387 Histidine kinase-like ATPases bcf_22705 SM00388 His Kinase A (phosphoacceptor) domain bcf_22710 SM00448 cheY-homologous receiver domain bcf_22710 SM00862 Transcriptional regulatory protein, C terminal bcf_22725 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase bcf_22745 SM00382 ATPases associated with a variety of cellular activities bcf_22760 SM00725 NEAr Transporter domain bcf_22765 SM00725 NEAr Transporter domain bcf_22775 SM00363 S4 RNA-binding domain bcf_22780 SM00463 Small MutS-related domain bcf_22780 SM00533 DNA-binding domain of DNA mismatch repair MUTS family bcf_22780 SM00534 ATPase domain of DNA mismatch repair MUTS family bcf_22785 SM00278 Helix-hairpin-helix DNA-binding motif class 1 bcf_22785 SM00481 DNA polymerase alpha chain like domain bcf_22785 SM00483 DNA polymerase X family bcf_22820 SM00873 B3/4 domain bcf_22820 SM00874 tRNA synthetase B5 domain bcf_22820 SM00896 Ferredoxin-fold anticodon binding domain bcf_22830 SM00967 RNA 2'-O ribose methyltransferase substrate binding bcf_22920 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain bcf_22930 SM00382 ATPases associated with a variety of cellular activities bcf_22955 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain bcf_22970 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain bcf_22970 SM01232 bcf_22970 bcf_22975 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs bcf_22975 SM00474 3'-5' exonuclease bcf_22975 SM00475 5'-3' exonuclease bcf_22975 SM00482 DNA polymerase A domain bcf_22980 SM00091 PAS domain bcf_22980 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain bcf_22980 SM00387 Histidine kinase-like ATPases bcf_22980 SM00388 His Kinase A (phosphoacceptor) domain bcf_22985 SM00448 cheY-homologous receiver domain bcf_22985 SM00862 Transcriptional regulatory protein, C terminal bcf_23005 SM01329 bcf_23005 bcf_23050 SM00345 helix_turn_helix gluconate operon transcriptional repressor bcf_23055 SM00919 Malic enzyme, NAD binding domain bcf_23055 SM01274 bcf_23055 bcf_23060 SM00481 DNA polymerase alpha chain like domain bcf_23105 SM00116 Domain in cystathionine beta-synthase and other proteins. bcf_23115 SM00849 Metallo-beta-lactamase superfamily bcf_23175 SM00530 Helix-turn-helix XRE-family like proteins bcf_23185 SM01002 Alanine dehydrogenase/PNT, C-terminal domain bcf_23185 SM01003 Alanine dehydrogenase/PNT, N-terminal domain bcf_23315 SM00981 bcf_23315 bcf_23355 SM00363 S4 RNA-binding domain bcf_23355 SM01390 bcf_23355 bcf_23395 SM00363 S4 RNA-binding domain bcf_23415 SM00116 Domain in cystathionine beta-synthase and other proteins. bcf_23435 SM00448 cheY-homologous receiver domain bcf_23435 SM00862 Transcriptional regulatory protein, C terminal bcf_23440 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain bcf_23440 SM00387 Histidine kinase-like ATPases bcf_23440 SM00388 His Kinase A (phosphoacceptor) domain bcf_23445 SM00248 ankyrin repeats bcf_23480 SM00354 helix_turn _helix lactose operon repressor bcf_23530 SM00382 ATPases associated with a variety of cellular activities bcf_23530 SM00843 bcf_23530 bcf_23570 SM00849 Metallo-beta-lactamase superfamily bcf_23590 SM00642 Alpha-amylase domain bcf_23605 SM00420 helix_turn_helix, Deoxyribose operon repressor bcf_23610 SM00363 S4 RNA-binding domain bcf_23635 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor bcf_23660 SM01058 CarD-like/TRCF domain bcf_23695 SM00852 Probable molybdopterin binding domain bcf_23710 SM00729 Elongator protein 3, MiaB family, Radical SAM bcf_23730 SM00450 Rhodanese Homology Domain bcf_23810 SM00382 ATPases associated with a variety of cellular activities bcf_23830 SM00729 Elongator protein 3, MiaB family, Radical SAM bcf_23840 SM00382 ATPases associated with a variety of cellular activities bcf_23890 SM00014 Acid phosphatase homologues bcf_23905 SM00852 Probable molybdopterin binding domain bcf_23960 SM00387 Histidine kinase-like ATPases bcf_23965 SM00387 Histidine kinase-like ATPases bcf_23965 SM00388 His Kinase A (phosphoacceptor) domain bcf_23995 SM00382 ATPases associated with a variety of cellular activities bcf_24055 SM01234 bcf_24055 bcf_24060 SM00947 Carbonic anhydrase bcf_24080 SM00894 Excalibur calcium-binding domain bcf_24150 SM00899 bcf_24150 bcf_24160 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain bcf_24160 SM00387 Histidine kinase-like ATPases bcf_24160 SM00388 His Kinase A (phosphoacceptor) domain bcf_24165 SM00448 cheY-homologous receiver domain bcf_24165 SM00862 Transcriptional regulatory protein, C terminal bcf_24195 SM00046 Diacylglycerol kinase catalytic domain (presumed) bcf_24235 SM00382 ATPases associated with a variety of cellular activities bcf_24240 SM00342 helix_turn_helix, arabinose operon control protein bcf_24240 SM00871 Bacterial transcription activator, effector binding domain bcf_24245 SM00448 cheY-homologous receiver domain bcf_24245 SM00862 Transcriptional regulatory protein, C terminal bcf_24250 SM00387 Histidine kinase-like ATPases bcf_24265 SM00382 ATPases associated with a variety of cellular activities bcf_24285 SM00345 helix_turn_helix gluconate operon transcriptional repressor bcf_24285 SM00866 bcf_24285 bcf_24315 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain bcf_24315 SM00387 Histidine kinase-like ATPases bcf_24315 SM00388 His Kinase A (phosphoacceptor) domain bcf_24320 SM00448 cheY-homologous receiver domain bcf_24320 SM00862 Transcriptional regulatory protein, C terminal bcf_24325 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain bcf_24365 SM00357 Cold shock protein domain bcf_24400 SM00642 Alpha-amylase domain bcf_24570 SM00316 Ribosomal protein S1-like RNA-binding domain bcf_24580 SM00344 helix_turn_helix ASNC type bcf_24615 SM01298 bcf_24615 bcf_24620 SM00479 bcf_24620 bcf_24710 SM00871 Bacterial transcription activator, effector binding domain bcf_24760 SM00382 ATPases associated with a variety of cellular activities bcf_24825 SM00382 ATPases associated with a variety of cellular activities bcf_24880 SM00422 helix_turn_helix, mercury resistance bcf_24895 SM00855 Phosphoglycerate mutase family bcf_24905 SM00729 Elongator protein 3, MiaB family, Radical SAM bcf_24965 SM00382 ATPases associated with a variety of cellular activities bcf_24985 SM00382 ATPases associated with a variety of cellular activities bcf_24985 SM00930 bcf_24985 bcf_25005 SM00493 bcf_25005 bcf_25090 SM00849 Metallo-beta-lactamase superfamily bcf_25095 SM00382 ATPases associated with a variety of cellular activities bcf_25160 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). bcf_25160 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain bcf_25240 SM00530 Helix-turn-helix XRE-family like proteins bcf_25265 SM00448 cheY-homologous receiver domain bcf_25265 SM00862 Transcriptional regulatory protein, C terminal bcf_25270 SM00387 Histidine kinase-like ATPases bcf_25270 SM00388 His Kinase A (phosphoacceptor) domain bcf_25290 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). bcf_25290 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain bcf_25295 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). bcf_25295 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain bcf_25315 SM00347 helix_turn_helix multiple antibiotic resistance protein bcf_25415 SM01276 bcf_25415 bcf_25450 SM00363 S4 RNA-binding domain bcf_25470 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain bcf_25475 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). bcf_25510 SM00382 ATPases associated with a variety of cellular activities bcf_25535 SM00382 ATPases associated with a variety of cellular activities bcf_25560 SM00448 cheY-homologous receiver domain bcf_25560 SM00862 Transcriptional regulatory protein, C terminal bcf_25570 SM00316 Ribosomal protein S1-like RNA-binding domain bcf_25570 SM00955 bcf_25570 bcf_25575 SM00357 Cold shock protein domain bcf_25575 SM00955 bcf_25575 bcf_25605 SM01192 bcf_25605 bcf_25605 SM01193 bcf_25605 bcf_25625 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain bcf_25655 SM00954 Region found in RelA / SpoT proteins bcf_25760 SM00028 Tetratricopeptide repeats bcf_25800 SM00382 ATPases associated with a variety of cellular activities bcf_25840 SM00487 DEAD-like helicases superfamily bcf_25840 SM00490 helicase superfamily c-terminal domain bcf_25855 SM00422 helix_turn_helix, mercury resistance bcf_25875 SM00530 Helix-turn-helix XRE-family like proteins bcf_25890 SM00422 helix_turn_helix, mercury resistance bcf_25910 SM00382 ATPases associated with a variety of cellular activities bcf_25920 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. bcf_25920 SM00245 tail specific protease bcf_25930 SM00382 ATPases associated with a variety of cellular activities bcf_25945 SM00937 bcf_25945 bcf_25955 SM00957 SecA DEAD-like domain bcf_25955 SM00958 SecA preprotein cross-linking domain bcf_25970 SM00357 Cold shock protein domain bcf_25980 SM00487 DEAD-like helicases superfamily bcf_25980 SM00490 helicase superfamily c-terminal domain bcf_26015 SM00984 UDP binding domain bcf_26030 SM00382 ATPases associated with a variety of cellular activities bcf_26035 SM00754 A domain in the BMP inhibitor chordin and in microbial proteins. bcf_26085 SM00850 LytTr DNA-binding domain bcf_26220 SM00287 Bacterial SH3 domain homologues bcf_26250 SM00287 Bacterial SH3 domain homologues bcf_26280 SM00487 DEAD-like helicases superfamily bcf_26280 SM00490 helicase superfamily c-terminal domain bcf_26325 SM00382 ATPases associated with a variety of cellular activities bcf_26335 SM00530 Helix-turn-helix XRE-family like proteins bcf_26360 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain bcf_26360 SM00387 Histidine kinase-like ATPases bcf_26360 SM00388 His Kinase A (phosphoacceptor) domain bcf_26365 SM00448 cheY-homologous receiver domain bcf_26365 SM00862 Transcriptional regulatory protein, C terminal bcf_26420 SM00984 UDP binding domain bcf_26500 SM00382 ATPases associated with a variety of cellular activities bcf_26505 SM00850 LytTr DNA-binding domain bcf_26585 SM00052 Putative diguanylate phosphodiesterase bcf_26585 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) bcf_26585 SM00091 PAS domain bcf_26585 SM00267 diguanylate cyclase bcf_26605 SM00382 ATPases associated with a variety of cellular activities bcf_26685 SM00226 Low molecular weight phosphatase family bcf_26700 SM00903 Flavin reductase like domain bcf_26745 SM00937 bcf_26745 bcf_26765 SM00357 Cold shock protein domain bcf_26765 SM00382 ATPases associated with a variety of cellular activities bcf_26765 SM00959 Rho termination factor, N-terminal domain bcf_26790 SM00448 cheY-homologous receiver domain bcf_26840 SM00155 Phospholipase D. Active site motifs. bcf_26850 SM00052 Putative diguanylate phosphodiesterase bcf_26850 SM00267 diguanylate cyclase bcf_26860 SM00530 Helix-turn-helix XRE-family like proteins bcf_26870 SM00421 helix_turn_helix, Lux Regulon bcf_26870 SM00448 cheY-homologous receiver domain bcf_26885 SM00382 ATPases associated with a variety of cellular activities bcf_26925 SM00836 DALR anticodon binding domain bcf_26925 SM01016 Arginyl tRNA synthetase N terminal dom bcf_26970 SM00422 helix_turn_helix, mercury resistance bcf_27005 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. bcf_27015 SM00382 ATPases associated with a variety of cellular activities bcf_27065 SM00936 Penicillin-binding protein 5, C-terminal domain bcf_27110 SM00986 Uracil DNA glycosylase superfamily bcf_27110 SM00987 UreE urease accessory protein, C-terminal domain bcf_27120 SM00382 ATPases associated with a variety of cellular activities bcf_27130 SM00354 helix_turn _helix lactose operon repressor bcf_27160 SM00100 Cyclic nucleotide-monophosphate binding domain bcf_27170 SM00421 helix_turn_helix, Lux Regulon bcf_27170 SM00448 cheY-homologous receiver domain bcf_27175 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. bcf_27190 SM00267 diguanylate cyclase bcf_27205 SM00448 cheY-homologous receiver domain bcf_27205 SM00850 LytTr DNA-binding domain bcf_27240 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). bcf_27265 SM00382 ATPases associated with a variety of cellular activities bcf_27320 SM00448 cheY-homologous receiver domain bcf_27320 SM00850 LytTr DNA-binding domain bcf_27325 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. bcf_27325 SM00387 Histidine kinase-like ATPases bcf_27380 SM00487 DEAD-like helicases superfamily bcf_27380 SM00490 helicase superfamily c-terminal domain bcf_27390 SM01240 bcf_27390 bcf_27415 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. bcf_27420 SM00849 Metallo-beta-lactamase superfamily bcf_27435 SM00091 PAS domain bcf_27435 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain bcf_27435 SM00387 Histidine kinase-like ATPases bcf_27435 SM00388 His Kinase A (phosphoacceptor) domain bcf_27440 SM00448 cheY-homologous receiver domain bcf_27440 SM00862 Transcriptional regulatory protein, C terminal bcf_27465 SM00788 Adenylosuccinate synthetase bcf_27480 SM00267 diguanylate cyclase bcf_27525 SM00470 ParB-like nuclease domain bcf_27535 SM00470 ParB-like nuclease domain bcf_27545 SM01228 bcf_27545 bcf_27555 SM00393 Putative single-stranded nucleic acids-binding domain bcf_27555 SM01245 bcf_27555 bcf_27730 SM01040 BRO family, N-terminal domain bcf_27735 SM00530 Helix-turn-helix XRE-family like proteins bcf_27740 SM00530 Helix-turn-helix XRE-family like proteins bcf_27760 SM00530 Helix-turn-helix XRE-family like proteins bcf_27835 SM00422 helix_turn_helix, mercury resistance bcf_27875 SM00646 bcf_27875 bcf_28035 SM00530 Helix-turn-helix XRE-family like proteins