BG03_1 SM00754 A domain in the BMP inhibitor chordin and in microbial proteins. BG03_1001 SM00529 Helix-turn-helix diphteria tox regulatory element BG03_1008 SM00841 Elongation factor P, C-terminal BG03_1008 SM01185 BG03_1008 BG03_101 SM00382 ATPases associated with a variety of cellular activities BG03_1012 SM00382 ATPases associated with a variety of cellular activities BG03_1022 SM00878 Biotin carboxylase C-terminal domain BG03_1029 SM00861 Transketolase, pyrimidine binding domain BG03_1030 SM00363 S4 RNA-binding domain BG03_1033 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BG03_1034 SM00448 cheY-homologous receiver domain BG03_1041 SM00091 PAS domain BG03_1041 SM00382 ATPases associated with a variety of cellular activities BG03_1043 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BG03_1047 SM00861 Transketolase, pyrimidine binding domain BG03_1054 SM00062 Bacterial periplasmic substrate-binding proteins BG03_1054 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BG03_1056 SM00382 ATPases associated with a variety of cellular activities BG03_1065 SM00831 Cation transporter/ATPase, N-terminus BG03_1067 SM00849 Metallo-beta-lactamase superfamily BG03_1071 SM00849 Metallo-beta-lactamase superfamily BG03_1074 SM00859 Semialdehyde dehydrogenase, NAD binding domain BG03_108 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BG03_1081 SM00347 helix_turn_helix multiple antibiotic resistance protein BG03_109 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain BG03_1091 SM00729 Elongator protein 3, MiaB family, Radical SAM BG03_1091 SM00876 Biotin and Thiamin Synthesis associated domain BG03_1097 SM00704 CDGSH-type zinc finger. Function unknown. BG03_1101 SM00354 helix_turn _helix lactose operon repressor BG03_111 SM00363 S4 RNA-binding domain BG03_1120 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain BG03_1124 SM00347 helix_turn_helix multiple antibiotic resistance protein BG03_1128 SM00382 ATPases associated with a variety of cellular activities BG03_1129 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG03_1130 SM00936 Penicillin-binding protein 5, C-terminal domain BG03_1132 SM00387 Histidine kinase-like ATPases BG03_1151 SM00849 Metallo-beta-lactamase superfamily BG03_1154 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG03_1154 SM00866 BG03_1154 BG03_1156 SM01061 CAT RNA binding domain BG03_1163 SM00267 diguanylate cyclase BG03_1169 SM01007 Class II Aldolase and Adducin N-terminal domain BG03_1186 SM00382 ATPases associated with a variety of cellular activities BG03_119 SM01276 BG03_119 BG03_1193 SM00382 ATPases associated with a variety of cellular activities BG03_1194 SM00642 Alpha-amylase domain BG03_1195 SM00642 Alpha-amylase domain BG03_1199 SM00354 helix_turn _helix lactose operon repressor BG03_12 SM00487 DEAD-like helicases superfamily BG03_12 SM00490 helicase superfamily c-terminal domain BG03_1202 SM00387 Histidine kinase-like ATPases BG03_1202 SM00388 His Kinase A (phosphoacceptor) domain BG03_1215 SM00267 diguanylate cyclase BG03_1224 SM00052 Putative diguanylate phosphodiesterase BG03_1237 SM00849 Metallo-beta-lactamase superfamily BG03_1243 SM00861 Transketolase, pyrimidine binding domain BG03_1259 SM00838 Elongation factor G C-terminus BG03_1264 SM00670 Large family of predicted nucleotide-binding domains BG03_1268 SM00878 Biotin carboxylase C-terminal domain BG03_1280 SM00855 Phosphoglycerate mutase family BG03_1288 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BG03_1292 SM00717 SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains BG03_1298 SM00740 BG03_1298 BG03_1299 SM00740 BG03_1299 BG03_1307 SM00842 Cell division protein FtsA BG03_1308 SM00864 Tubulin/FtsZ family, GTPase domain BG03_1308 SM00865 Tubulin/FtsZ family, C-terminal domain BG03_1317 SM00363 S4 RNA-binding domain BG03_1322 SM00363 S4 RNA-binding domain BG03_1327 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain BG03_1328 SM00851 MGS-like domain BG03_1328 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BG03_1328 SM01209 BG03_1328 BG03_1331 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family BG03_1340 SM00831 Cation transporter/ATPase, N-terminus BG03_1343 SM00072 Guanylate kinase homologues. BG03_1344 SM01409 BG03_1344 BG03_1346 SM00487 DEAD-like helicases superfamily BG03_1346 SM00490 helicase superfamily c-terminal domain BG03_1351 SM00331 Sigma factor PP2C-like phosphatases BG03_1351 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain BG03_1352 SM00220 Serine/Threonine protein kinases, catalytic domain BG03_1352 SM00740 BG03_1352 BG03_1355 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain BG03_1358 SM01120 BG03_1358 BG03_1358 SM01121 BG03_1358 BG03_1359 SM00487 DEAD-like helicases superfamily BG03_1359 SM00490 helicase superfamily c-terminal domain BG03_1362 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. BG03_1363 SM00822 BG03_1363 BG03_1365 SM00358 Double-stranded RNA binding motif BG03_1365 SM00535 Ribonuclease III family BG03_1366 SM00968 SMC proteins Flexible Hinge Domain BG03_1367 SM00382 ATPases associated with a variety of cellular activities BG03_1367 SM00962 SRP54-type protein, GTPase domain BG03_1367 SM00963 SRP54-type protein, helical bundle domain BG03_1369 SM00382 ATPases associated with a variety of cellular activities BG03_1369 SM00962 SRP54-type protein, GTPase domain BG03_1369 SM00963 SRP54-type protein, helical bundle domain BG03_137 SM00347 helix_turn_helix multiple antibiotic resistance protein BG03_1379 SM00881 CoA binding domain BG03_1381 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BG03_1381 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BG03_1381 SM00493 BG03_1381 BG03_1385 SM00382 ATPases associated with a variety of cellular activities BG03_1385 SM01086 C-terminal, D2-small domain, of ClpB protein BG03_1394 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BG03_1396 SM00479 BG03_1396 BG03_1396 SM00481 DNA polymerase alpha chain like domain BG03_1398 SM00316 Ribosomal protein S1-like RNA-binding domain BG03_1398 SM00322 K homology RNA-binding domain BG03_14 SM00357 Cold shock protein domain BG03_1405 SM00904 Riboflavin kinase BG03_1406 SM01387 BG03_1406 BG03_1407 SM00316 Ribosomal protein S1-like RNA-binding domain BG03_1407 SM00322 K homology RNA-binding domain BG03_141 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BG03_141 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG03_1413 SM00857 Resolvase, N terminal domain BG03_142 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BG03_142 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG03_1421 SM00859 Semialdehyde dehydrogenase, NAD binding domain BG03_1423 SM01130 BG03_1423 BG03_1424 SM00849 Metallo-beta-lactamase superfamily BG03_1427 SM00382 ATPases associated with a variety of cellular activities BG03_1427 SM00843 BG03_1427 BG03_1428 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG03_1428 SM00866 BG03_1428 BG03_1430 SM00382 ATPases associated with a variety of cellular activities BG03_1440 SM00852 Probable molybdopterin binding domain BG03_1441 SM00382 ATPases associated with a variety of cellular activities BG03_1442 SM00322 K homology RNA-binding domain BG03_1442 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BG03_1448 SM00729 Elongator protein 3, MiaB family, Radical SAM BG03_1451 SM00533 DNA-binding domain of DNA mismatch repair MUTS family BG03_1451 SM00534 ATPase domain of DNA mismatch repair MUTS family BG03_1452 SM00853 MutL C terminal dimerisation domain BG03_1452 SM01340 BG03_1452 BG03_1454 SM00382 ATPases associated with a variety of cellular activities BG03_1457 SM00448 cheY-homologous receiver domain BG03_1457 SM00862 Transcriptional regulatory protein, C terminal BG03_1458 SM00387 Histidine kinase-like ATPases BG03_1458 SM00388 His Kinase A (phosphoacceptor) domain BG03_146 SM00387 Histidine kinase-like ATPases BG03_146 SM00388 His Kinase A (phosphoacceptor) domain BG03_1464 SM00257 Lysin motif BG03_1466 SM00148 Phospholipase C, catalytic domain (part); domain X BG03_1468 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG03_1468 SM00866 BG03_1468 BG03_147 SM00448 cheY-homologous receiver domain BG03_147 SM00862 Transcriptional regulatory protein, C terminal BG03_1472 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG03_1482 SM00052 Putative diguanylate phosphodiesterase BG03_1482 SM00091 PAS domain BG03_1482 SM00267 diguanylate cyclase BG03_1488 SM00478 endonuclease III BG03_1490 SM00342 helix_turn_helix, arabinose operon control protein BG03_1495 SM00382 ATPases associated with a variety of cellular activities BG03_1502 SM00411 bacterial (prokaryotic) histone like domain BG03_1505 SM00636 BG03_1505 BG03_1511 SM00420 helix_turn_helix, Deoxyribose operon repressor BG03_1511 SM01134 BG03_1511 BG03_1514 SM00287 Bacterial SH3 domain homologues BG03_152 SM00530 Helix-turn-helix XRE-family like proteins BG03_1520 SM00382 ATPases associated with a variety of cellular activities BG03_1525 SM00422 helix_turn_helix, mercury resistance BG03_1526 SM01230 BG03_1526 BG03_1536 SM00857 Resolvase, N terminal domain BG03_1539 SM00062 Bacterial periplasmic substrate-binding proteins BG03_1540 SM00382 ATPases associated with a variety of cellular activities BG03_1543 SM00861 Transketolase, pyrimidine binding domain BG03_1546 SM00382 ATPases associated with a variety of cellular activities BG03_1547 SM00382 ATPases associated with a variety of cellular activities BG03_1550 SM00644 BG03_1550 BG03_1559 SM00382 ATPases associated with a variety of cellular activities BG03_1577 SM01058 CarD-like/TRCF domain BG03_1584 SM00091 PAS domain BG03_1584 SM00387 Histidine kinase-like ATPases BG03_1584 SM00388 His Kinase A (phosphoacceptor) domain BG03_1587 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain BG03_1588 SM00644 BG03_1588 BG03_1588 SM00701 Animal peptidoglycan recognition proteins homologous to Bacteriophage T3 lysozyme. BG03_1594 SM00530 Helix-turn-helix XRE-family like proteins BG03_1595 SM00382 ATPases associated with a variety of cellular activities BG03_16 SM00957 SecA DEAD-like domain BG03_16 SM00958 SecA preprotein cross-linking domain BG03_1603 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BG03_1612 SM00382 ATPases associated with a variety of cellular activities BG03_1615 SM00479 BG03_1615 BG03_1619 SM00257 Lysin motif BG03_1619 SM00636 BG03_1619 BG03_1622 SM01207 BG03_1622 BG03_1625 SM00448 cheY-homologous receiver domain BG03_1625 SM00862 Transcriptional regulatory protein, C terminal BG03_1626 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BG03_1627 SM00881 CoA binding domain BG03_1628 SM00387 Histidine kinase-like ATPases BG03_1628 SM00433 TopoisomeraseII BG03_1629 SM00434 DNA Topoisomerase IV BG03_1632 SM00420 helix_turn_helix, Deoxyribose operon repressor BG03_1634 SM00382 ATPases associated with a variety of cellular activities BG03_1656 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BG03_1656 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BG03_1660 SM00729 Elongator protein 3, MiaB family, Radical SAM BG03_1663 SM00852 Probable molybdopterin binding domain BG03_168 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BG03_168 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG03_1686 SM01022 BG03_1686 BG03_1691 SM00357 Cold shock protein domain BG03_1692 SM00479 BG03_1692 BG03_1699 SM00382 ATPases associated with a variety of cellular activities BG03_17 SM00937 BG03_17 BG03_1700 SM00062 Bacterial periplasmic substrate-binding proteins BG03_1700 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BG03_1708 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins BG03_1710 SM00387 Histidine kinase-like ATPases BG03_1710 SM00388 His Kinase A (phosphoacceptor) domain BG03_1713 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BG03_1714 SM00646 BG03_1714 BG03_1720 SM00347 helix_turn_helix multiple antibiotic resistance protein BG03_1729 SM00829 Enoylreductase BG03_1730 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BG03_1742 SM00422 helix_turn_helix, mercury resistance BG03_1742 SM00871 Bacterial transcription activator, effector binding domain BG03_1747 SM00642 Alpha-amylase domain BG03_1749 SM00533 DNA-binding domain of DNA mismatch repair MUTS family BG03_1749 SM00534 ATPase domain of DNA mismatch repair MUTS family BG03_1751 SM00855 Phosphoglycerate mutase family BG03_1752 SM00829 Enoylreductase BG03_177 SM00849 Metallo-beta-lactamase superfamily BG03_1773 SM00829 Enoylreductase BG03_1777 SM00849 Metallo-beta-lactamase superfamily BG03_1791 SM00849 Metallo-beta-lactamase superfamily BG03_1796 SM00382 ATPases associated with a variety of cellular activities BG03_1799 SM00420 helix_turn_helix, Deoxyribose operon repressor BG03_1800 SM00871 Bacterial transcription activator, effector binding domain BG03_1806 SM00636 BG03_1806 BG03_1807 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BG03_1808 SM00248 ankyrin repeats BG03_1821 SM00849 Metallo-beta-lactamase superfamily BG03_1825 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG03_1825 SM00866 BG03_1825 BG03_1829 SM00914 BG03_1829 BG03_1835 SM00829 Enoylreductase BG03_1838 SM00861 Transketolase, pyrimidine binding domain BG03_1839 SM01350 BG03_1839 BG03_1853 SM00422 helix_turn_helix, mercury resistance BG03_1854 SM01091 Transporter associated domain BG03_1872 SM00382 ATPases associated with a variety of cellular activities BG03_1874 SM01266 BG03_1874 BG03_1884 SM00530 Helix-turn-helix XRE-family like proteins BG03_1887 SM00382 ATPases associated with a variety of cellular activities BG03_189 SM00493 BG03_189 BG03_19 SM00382 ATPases associated with a variety of cellular activities BG03_1903 SM00530 Helix-turn-helix XRE-family like proteins BG03_1906 SM00422 helix_turn_helix, mercury resistance BG03_1918 SM00382 ATPases associated with a variety of cellular activities BG03_192 SM00382 ATPases associated with a variety of cellular activities BG03_192 SM00930 BG03_192 BG03_1931 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BG03_1933 SM00382 ATPases associated with a variety of cellular activities BG03_1938 SM00347 helix_turn_helix multiple antibiotic resistance protein BG03_1944 SM00854 Bacterial capsule synthesis protein PGA_cap BG03_1951 SM00287 Bacterial SH3 domain homologues BG03_1951 SM00644 BG03_1951 BG03_1954 SM00421 helix_turn_helix, Lux Regulon BG03_1954 SM00448 cheY-homologous receiver domain BG03_196 SM00382 ATPases associated with a variety of cellular activities BG03_1969 SM00448 cheY-homologous receiver domain BG03_1969 SM00862 Transcriptional regulatory protein, C terminal BG03_1970 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG03_1970 SM00387 Histidine kinase-like ATPases BG03_1970 SM00388 His Kinase A (phosphoacceptor) domain BG03_1972 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BG03_1974 SM00382 ATPases associated with a variety of cellular activities BG03_1981 SM00530 Helix-turn-helix XRE-family like proteins BG03_1991 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG03_1991 SM00387 Histidine kinase-like ATPases BG03_1991 SM00388 His Kinase A (phosphoacceptor) domain BG03_1992 SM00448 cheY-homologous receiver domain BG03_1992 SM00862 Transcriptional regulatory protein, C terminal BG03_2 SM00382 ATPases associated with a variety of cellular activities BG03_2010 SM00344 helix_turn_helix ASNC type BG03_2020 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BG03_2023 SM00226 Low molecular weight phosphatase family BG03_2028 SM00421 helix_turn_helix, Lux Regulon BG03_2028 SM00448 cheY-homologous receiver domain BG03_2029 SM00387 Histidine kinase-like ATPases BG03_2031 SM00382 ATPases associated with a variety of cellular activities BG03_208 SM00729 Elongator protein 3, MiaB family, Radical SAM BG03_2081 SM00387 Histidine kinase-like ATPases BG03_2082 SM00448 cheY-homologous receiver domain BG03_2088 SM00465 GIY-YIG type nucleases (URI domain) BG03_2089 SM00342 helix_turn_helix, arabinose operon control protein BG03_2094 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BG03_2094 SM00091 PAS domain BG03_2094 SM00387 Histidine kinase-like ATPases BG03_2094 SM00388 His Kinase A (phosphoacceptor) domain BG03_2098 SM00530 Helix-turn-helix XRE-family like proteins BG03_2099 SM00870 BG03_2099 BG03_21 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BG03_21 SM00245 tail specific protease BG03_210 SM00855 Phosphoglycerate mutase family BG03_2106 SM00849 Metallo-beta-lactamase superfamily BG03_2122 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BG03_2126 SM00346 helix_turn_helix isocitrate lyase regulation BG03_2127 SM00796 Allophanate hydrolase subunit 1 BG03_2128 SM00797 Allophanate hydrolase subunit 2 BG03_213 SM00422 helix_turn_helix, mercury resistance BG03_2142 SM00422 helix_turn_helix, mercury resistance BG03_2154 SM00448 cheY-homologous receiver domain BG03_2154 SM00862 Transcriptional regulatory protein, C terminal BG03_2155 SM00387 Histidine kinase-like ATPases BG03_2155 SM00388 His Kinase A (phosphoacceptor) domain BG03_2158 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG03_2163 SM00342 helix_turn_helix, arabinose operon control protein BG03_2163 SM00871 Bacterial transcription activator, effector binding domain BG03_2167 SM00773 Proposed nucleic acid binding domain BG03_2170 SM00889 Elongation factor G, domain IV BG03_2171 SM00347 helix_turn_helix multiple antibiotic resistance protein BG03_2174 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BG03_2186 SM01060 BG03_2186 BG03_2199 SM00850 LytTr DNA-binding domain BG03_2204 SM00530 Helix-turn-helix XRE-family like proteins BG03_2206 SM00098 Alkaline phosphatase homologues BG03_2211 SM00346 helix_turn_helix isocitrate lyase regulation BG03_2214 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase BG03_2218 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BG03_2225 SM01133 BG03_2225 BG03_2229 SM00382 ATPases associated with a variety of cellular activities BG03_2235 SM00287 Bacterial SH3 domain homologues BG03_2243 SM00830 Chorismate mutase type II BG03_2257 SM00530 Helix-turn-helix XRE-family like proteins BG03_2259 SM00382 ATPases associated with a variety of cellular activities BG03_2280 SM00028 Tetratricopeptide repeats BG03_2284 SM00382 ATPases associated with a variety of cellular activities BG03_2285 SM00062 Bacterial periplasmic substrate-binding proteins BG03_2298 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG03_2299 SM00382 ATPases associated with a variety of cellular activities BG03_23 SM00382 ATPases associated with a variety of cellular activities BG03_2337 SM00344 helix_turn_helix ASNC type BG03_2345 SM00448 cheY-homologous receiver domain BG03_2345 SM00862 Transcriptional regulatory protein, C terminal BG03_2346 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG03_2346 SM00387 Histidine kinase-like ATPases BG03_2346 SM00388 His Kinase A (phosphoacceptor) domain BG03_2347 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain BG03_2352 SM00248 ankyrin repeats BG03_2356 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BG03_2359 SM00530 Helix-turn-helix XRE-family like proteins BG03_2371 SM00091 PAS domain BG03_2371 SM00382 ATPases associated with a variety of cellular activities BG03_2375 SM01130 BG03_2375 BG03_2382 SM01131 BG03_2382 BG03_239 SM00382 ATPases associated with a variety of cellular activities BG03_2391 SM00341 Helicase and RNase D C-terminal BG03_2391 SM00487 DEAD-like helicases superfamily BG03_2391 SM00490 helicase superfamily c-terminal domain BG03_2391 SM00956 BG03_2391 BG03_2397 SM00347 helix_turn_helix multiple antibiotic resistance protein BG03_2405 SM00849 Metallo-beta-lactamase superfamily BG03_2413 SM00060 Fibronectin type 3 domain BG03_2413 SM00495 Chitin-binding domain type 3 BG03_2420 SM00116 Domain in cystathionine beta-synthase and other proteins. BG03_2420 SM00382 ATPases associated with a variety of cellular activities BG03_2432 SM00861 Transketolase, pyrimidine binding domain BG03_2437 SM00420 helix_turn_helix, Deoxyribose operon repressor BG03_2437 SM01134 BG03_2437 BG03_2441 SM00382 ATPases associated with a variety of cellular activities BG03_2464 SM00829 Enoylreductase BG03_2465 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG03_2470 SM00871 Bacterial transcription activator, effector binding domain BG03_2472 SM00642 Alpha-amylase domain BG03_2473 SM00014 Acid phosphatase homologues BG03_2489 SM00465 GIY-YIG type nucleases (URI domain) BG03_250 SM00871 Bacterial transcription activator, effector binding domain BG03_2505 SM00480 DNA polymerase III beta subunit BG03_2519 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG03_2530 SM00422 helix_turn_helix, mercury resistance BG03_2538 SM00740 BG03_2538 BG03_2539 SM00014 Acid phosphatase homologues BG03_2540 SM00829 Enoylreductase BG03_2541 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG03_2541 SM00387 Histidine kinase-like ATPases BG03_2541 SM00388 His Kinase A (phosphoacceptor) domain BG03_2542 SM00448 cheY-homologous receiver domain BG03_2542 SM00862 Transcriptional regulatory protein, C terminal BG03_2546 SM00387 Histidine kinase-like ATPases BG03_2546 SM00388 His Kinase A (phosphoacceptor) domain BG03_2549 SM00382 ATPases associated with a variety of cellular activities BG03_2553 SM00091 PAS domain BG03_2553 SM00387 Histidine kinase-like ATPases BG03_2553 SM00388 His Kinase A (phosphoacceptor) domain BG03_2583 SM01209 BG03_2583 BG03_2584 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG03_2590 SM00382 ATPases associated with a variety of cellular activities BG03_2593 SM00382 ATPases associated with a variety of cellular activities BG03_2595 SM00387 Histidine kinase-like ATPases BG03_2596 SM00448 cheY-homologous receiver domain BG03_2596 SM00862 Transcriptional regulatory protein, C terminal BG03_26 SM00422 helix_turn_helix, mercury resistance BG03_2610 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG03_2613 SM00342 helix_turn_helix, arabinose operon control protein BG03_2616 SM00382 ATPases associated with a variety of cellular activities BG03_2630 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BG03_2631 SM00448 cheY-homologous receiver domain BG03_2631 SM00862 Transcriptional regulatory protein, C terminal BG03_2632 SM00387 Histidine kinase-like ATPases BG03_2632 SM00388 His Kinase A (phosphoacceptor) domain BG03_2645 SM00878 Biotin carboxylase C-terminal domain BG03_2651 SM00382 ATPases associated with a variety of cellular activities BG03_2679 SM00855 Phosphoglycerate mutase family BG03_268 SM00479 BG03_268 BG03_2680 SM00347 helix_turn_helix multiple antibiotic resistance protein BG03_2685 SM00382 ATPases associated with a variety of cellular activities BG03_269 SM01298 BG03_269 BG03_2692 SM00487 DEAD-like helicases superfamily BG03_2692 SM00490 helicase superfamily c-terminal domain BG03_2696 SM00849 Metallo-beta-lactamase superfamily BG03_2701 SM00347 helix_turn_helix multiple antibiotic resistance protein BG03_2704 SM01207 BG03_2704 BG03_2718 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BG03_2719 SM00835 Cupin BG03_2725 SM00530 Helix-turn-helix XRE-family like proteins BG03_2727 SM00646 BG03_2727 BG03_2729 SM00382 ATPases associated with a variety of cellular activities BG03_2730 SM00382 ATPases associated with a variety of cellular activities BG03_2737 SM00859 Semialdehyde dehydrogenase, NAD binding domain BG03_2743 SM00857 Resolvase, N terminal domain BG03_2750 SM00530 Helix-turn-helix XRE-family like proteins BG03_2757 SM00644 BG03_2757 BG03_276 SM00344 helix_turn_helix ASNC type BG03_278 SM00316 Ribosomal protein S1-like RNA-binding domain BG03_2785 SM00966 SpoVT / AbrB like domain BG03_2797 SM00717 SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains BG03_2803 SM00482 DNA polymerase A domain BG03_2808 SM00487 DEAD-like helicases superfamily BG03_2808 SM00490 helicase superfamily c-terminal domain BG03_2821 SM00530 Helix-turn-helix XRE-family like proteins BG03_2822 SM00530 Helix-turn-helix XRE-family like proteins BG03_2826 SM00530 Helix-turn-helix XRE-family like proteins BG03_2828 SM00357 Cold shock protein domain BG03_2836 SM00530 Helix-turn-helix XRE-family like proteins BG03_2840 SM01059 Chloramphenicol acetyltransferase BG03_2845 SM00347 helix_turn_helix multiple antibiotic resistance protein BG03_2851 SM00849 Metallo-beta-lactamase superfamily BG03_2860 SM00382 ATPases associated with a variety of cellular activities BG03_2861 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BG03_2862 SM00363 S4 RNA-binding domain BG03_2870 SM00411 bacterial (prokaryotic) histone like domain BG03_2874 SM00923 MbtH-like protein BG03_2875 SM00823 Phosphopantetheine attachment site BG03_2875 SM00824 Thioesterase BG03_2879 SM00822 BG03_2879 BG03_2882 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BG03_29 SM00530 Helix-turn-helix XRE-family like proteins BG03_2926 SM00014 Acid phosphatase homologues BG03_2929 SM00219 Tyrosine kinase, catalytic domain BG03_2937 SM00382 ATPases associated with a variety of cellular activities BG03_2940 SM00882 Coenzyme A transferase BG03_2941 SM00882 Coenzyme A transferase BG03_2944 SM00387 Histidine kinase-like ATPases BG03_2944 SM00388 His Kinase A (phosphoacceptor) domain BG03_2947 SM01091 Transporter associated domain BG03_2955 SM00382 ATPases associated with a variety of cellular activities BG03_2962 SM01350 BG03_2962 BG03_2969 SM00829 Enoylreductase BG03_2971 SM00421 helix_turn_helix, Lux Regulon BG03_2971 SM00448 cheY-homologous receiver domain BG03_2972 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BG03_2981 SM00014 Acid phosphatase homologues BG03_2993 SM00563 Phosphate acyltransferases BG03_3004 SM00382 ATPases associated with a variety of cellular activities BG03_3025 SM00028 Tetratricopeptide repeats BG03_3027 SM00836 DALR anticodon binding domain BG03_3027 SM01016 Arginyl tRNA synthetase N terminal dom BG03_3031 SM00567 E-Z type HEAT repeats BG03_3031 SM00932 Scaffold protein Nfu/NifU N terminal BG03_3035 SM00382 ATPases associated with a variety of cellular activities BG03_3036 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BG03_3056 SM00852 Probable molybdopterin binding domain BG03_3058 SM00729 Elongator protein 3, MiaB family, Radical SAM BG03_3059 SM00100 Cyclic nucleotide-monophosphate binding domain BG03_3059 SM00419 helix_turn_helix, cAMP Regulatory protein BG03_3061 SM00382 ATPases associated with a variety of cellular activities BG03_3062 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG03_3066 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BG03_3069 SM00460 Transglutaminase/protease-like homologues BG03_3072 SM00849 Metallo-beta-lactamase superfamily BG03_3078 SM00829 Enoylreductase BG03_3081 SM00487 DEAD-like helicases superfamily BG03_3081 SM00490 helicase superfamily c-terminal domain BG03_3102 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG03_3109 SM01005 Alanine racemase, C-terminal domain BG03_3112 SM00855 Phosphoglycerate mutase family BG03_3116 SM00244 prohibitin homologues BG03_3130 SM01091 Transporter associated domain BG03_3135 SM00155 Phospholipase D. Active site motifs. BG03_3145 SM00855 Phosphoglycerate mutase family BG03_315 SM00642 Alpha-amylase domain BG03_3156 SM00833 Cobalamin synthesis protein cobW C-terminal domain BG03_3168 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BG03_3168 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG03_3175 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BG03_3178 SM00966 SpoVT / AbrB like domain BG03_3183 SM00460 Transglutaminase/protease-like homologues BG03_3188 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG03_3202 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG03_3202 SM00387 Histidine kinase-like ATPases BG03_3202 SM00388 His Kinase A (phosphoacceptor) domain BG03_3203 SM00448 cheY-homologous receiver domain BG03_3203 SM00862 Transcriptional regulatory protein, C terminal BG03_3218 SM00382 ATPases associated with a variety of cellular activities BG03_322 SM00422 helix_turn_helix, mercury resistance BG03_3222 SM00448 cheY-homologous receiver domain BG03_3222 SM00862 Transcriptional regulatory protein, C terminal BG03_3223 SM00387 Histidine kinase-like ATPases BG03_3223 SM00388 His Kinase A (phosphoacceptor) domain BG03_3224 SM00387 Histidine kinase-like ATPases BG03_3224 SM00388 His Kinase A (phosphoacceptor) domain BG03_3225 SM00448 cheY-homologous receiver domain BG03_3225 SM00862 Transcriptional regulatory protein, C terminal BG03_3226 SM00382 ATPases associated with a variety of cellular activities BG03_3228 SM00287 Bacterial SH3 domain homologues BG03_3239 SM00382 ATPases associated with a variety of cellular activities BG03_324 SM00357 Cold shock protein domain BG03_3240 SM00382 ATPases associated with a variety of cellular activities BG03_3244 SM00347 helix_turn_helix multiple antibiotic resistance protein BG03_3250 SM00382 ATPases associated with a variety of cellular activities BG03_3251 SM00382 ATPases associated with a variety of cellular activities BG03_3258 SM00833 Cobalamin synthesis protein cobW C-terminal domain BG03_3285 SM00344 helix_turn_helix ASNC type BG03_3287 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BG03_3287 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BG03_3287 SM00493 BG03_3287 BG03_3290 SM01011 Aminopeptidase P, N-terminal domain BG03_3298 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain BG03_3300 SM01133 BG03_3300 BG03_3313 SM00450 Rhodanese Homology Domain BG03_3316 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG03_3316 SM00387 Histidine kinase-like ATPases BG03_3316 SM00388 His Kinase A (phosphoacceptor) domain BG03_3317 SM00448 cheY-homologous receiver domain BG03_3317 SM00862 Transcriptional regulatory protein, C terminal BG03_332 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BG03_3324 SM00850 LytTr DNA-binding domain BG03_333 SM00448 cheY-homologous receiver domain BG03_333 SM00862 Transcriptional regulatory protein, C terminal BG03_3331 SM00854 Bacterial capsule synthesis protein PGA_cap BG03_334 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG03_334 SM00387 Histidine kinase-like ATPases BG03_334 SM00388 His Kinase A (phosphoacceptor) domain BG03_3362 SM00047 Lysozyme subfamily 2 BG03_3363 SM00646 BG03_3363 BG03_3370 SM00530 Helix-turn-helix XRE-family like proteins BG03_3373 SM00487 DEAD-like helicases superfamily BG03_3373 SM00490 helicase superfamily c-terminal domain BG03_3374 SM00448 cheY-homologous receiver domain BG03_3375 SM00387 Histidine kinase-like ATPases BG03_3376 SM00919 Malic enzyme, NAD binding domain BG03_3376 SM01274 BG03_3376 BG03_3380 SM00155 Phospholipase D. Active site motifs. BG03_3384 SM00382 ATPases associated with a variety of cellular activities BG03_3386 SM00421 helix_turn_helix, Lux Regulon BG03_3386 SM00448 cheY-homologous receiver domain BG03_3393 SM00530 Helix-turn-helix XRE-family like proteins BG03_34 SM00422 helix_turn_helix, mercury resistance BG03_3409 SM00422 helix_turn_helix, mercury resistance BG03_3414 SM00833 Cobalamin synthesis protein cobW C-terminal domain BG03_3416 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG03_3416 SM00895 BG03_3416 BG03_342 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG03_342 SM00866 BG03_342 BG03_3424 SM00347 helix_turn_helix multiple antibiotic resistance protein BG03_3428 SM00855 Phosphoglycerate mutase family BG03_3431 SM00835 Cupin BG03_3435 SM00849 Metallo-beta-lactamase superfamily BG03_3435 SM01027 Beta-Casp domain BG03_3438 SM00382 ATPases associated with a variety of cellular activities BG03_3443 SM00530 Helix-turn-helix XRE-family like proteins BG03_3449 SM01321 BG03_3449 BG03_3459 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BG03_3461 SM00382 ATPases associated with a variety of cellular activities BG03_3461 SM00962 SRP54-type protein, GTPase domain BG03_3475 SM00260 Two component signalling adaptor domain BG03_3475 SM00448 cheY-homologous receiver domain BG03_348 SM00382 ATPases associated with a variety of cellular activities BG03_3482 SM00382 ATPases associated with a variety of cellular activities BG03_3497 SM00138 Methyltransferase, chemotaxis proteins BG03_3501 SM00073 Histidine Phosphotransfer domain BG03_3501 SM00260 Two component signalling adaptor domain BG03_3501 SM00387 Histidine kinase-like ATPases BG03_3501 SM01231 BG03_3501 BG03_3502 SM00448 cheY-homologous receiver domain BG03_351 SM00387 Histidine kinase-like ATPases BG03_352 SM00448 cheY-homologous receiver domain BG03_352 SM00862 Transcriptional regulatory protein, C terminal BG03_3520 SM00422 helix_turn_helix, mercury resistance BG03_3520 SM00871 Bacterial transcription activator, effector binding domain BG03_3521 SM00849 Metallo-beta-lactamase superfamily BG03_353 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BG03_3531 SM00357 Cold shock protein domain BG03_355 SM00342 helix_turn_helix, arabinose operon control protein BG03_355 SM00871 Bacterial transcription activator, effector binding domain BG03_3553 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs BG03_3553 SM00475 5'-3' exonuclease BG03_3559 SM00450 Rhodanese Homology Domain BG03_356 SM00382 ATPases associated with a variety of cellular activities BG03_3571 SM00491 BG03_3571 BG03_3573 SM00981 BG03_3573 BG03_358 SM00342 helix_turn_helix, arabinose operon control protein BG03_3584 SM00060 Fibronectin type 3 domain BG03_3586 SM00478 endonuclease III BG03_3586 SM00525 BG03_3586 BG03_3591 SM00479 BG03_3591 BG03_3591 SM00491 BG03_3591 BG03_3600 SM00851 MGS-like domain BG03_3604 SM00986 Uracil DNA glycosylase superfamily BG03_3604 SM00987 UreE urease accessory protein, C-terminal domain BG03_3613 SM00914 BG03_3613 BG03_3614 SM00028 Tetratricopeptide repeats BG03_3618 SM00562 BG03_3618 BG03_3623 SM00411 bacterial (prokaryotic) histone like domain BG03_3635 SM00316 Ribosomal protein S1-like RNA-binding domain BG03_3638 SM00870 BG03_3638 BG03_3640 SM00644 BG03_3640 BG03_3643 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BG03_3645 SM00422 helix_turn_helix, mercury resistance BG03_3647 SM00257 Lysin motif BG03_3649 SM00487 DEAD-like helicases superfamily BG03_3649 SM00490 helicase superfamily c-terminal domain BG03_365 SM00046 Diacylglycerol kinase catalytic domain (presumed) BG03_3654 SM00257 Lysin motif BG03_3656 SM00091 PAS domain BG03_3656 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG03_3656 SM00387 Histidine kinase-like ATPases BG03_3656 SM00388 His Kinase A (phosphoacceptor) domain BG03_3657 SM00448 cheY-homologous receiver domain BG03_3657 SM00862 Transcriptional regulatory protein, C terminal BG03_3661 SM00363 S4 RNA-binding domain BG03_3672 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG03_3672 SM00387 Histidine kinase-like ATPases BG03_3672 SM00388 His Kinase A (phosphoacceptor) domain BG03_3676 SM00387 Histidine kinase-like ATPases BG03_3676 SM00388 His Kinase A (phosphoacceptor) domain BG03_3694 SM00421 helix_turn_helix, Lux Regulon BG03_3694 SM00448 cheY-homologous receiver domain BG03_3695 SM00387 Histidine kinase-like ATPases BG03_37 SM00487 DEAD-like helicases superfamily BG03_37 SM00490 helicase superfamily c-terminal domain BG03_371 SM00448 cheY-homologous receiver domain BG03_371 SM00862 Transcriptional regulatory protein, C terminal BG03_372 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG03_372 SM00387 Histidine kinase-like ATPases BG03_372 SM00388 His Kinase A (phosphoacceptor) domain BG03_3731 SM01329 BG03_3731 BG03_3732 SM00917 LeuA allosteric (dimerisation) domain BG03_374 SM00899 BG03_374 BG03_3745 SM00347 helix_turn_helix multiple antibiotic resistance protein BG03_3769 SM00344 helix_turn_helix ASNC type BG03_3773 SM00382 ATPases associated with a variety of cellular activities BG03_3775 SM00382 ATPases associated with a variety of cellular activities BG03_3776 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG03_3791 SM00387 Histidine kinase-like ATPases BG03_3791 SM00388 His Kinase A (phosphoacceptor) domain BG03_3795 SM00347 helix_turn_helix multiple antibiotic resistance protein BG03_3796 SM00387 Histidine kinase-like ATPases BG03_3796 SM00388 His Kinase A (phosphoacceptor) domain BG03_3800 SM01007 Class II Aldolase and Adducin N-terminal domain BG03_3801 SM00365 Leucine-rich repeat, SDS22-like subfamily BG03_3801 SM00369 Leucine-rich repeats, typical (most populated) subfamily BG03_3801 SM00725 NEAr Transporter domain BG03_3803 SM00420 helix_turn_helix, Deoxyribose operon repressor BG03_3803 SM01134 BG03_3803 BG03_3808 SM00382 ATPases associated with a variety of cellular activities BG03_3815 SM00822 BG03_3815 BG03_3829 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG03_3829 SM00895 BG03_3829 BG03_3830 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG03_3830 SM00387 Histidine kinase-like ATPases BG03_3830 SM00388 His Kinase A (phosphoacceptor) domain BG03_3831 SM00448 cheY-homologous receiver domain BG03_3831 SM00862 Transcriptional regulatory protein, C terminal BG03_3841 SM00014 Acid phosphatase homologues BG03_3845 SM00382 ATPases associated with a variety of cellular activities BG03_3850 SM00530 Helix-turn-helix XRE-family like proteins BG03_386 SM00894 Excalibur calcium-binding domain BG03_3864 SM00530 Helix-turn-helix XRE-family like proteins BG03_3865 SM00861 Transketolase, pyrimidine binding domain BG03_3875 SM01324 BG03_3875 BG03_3890 SM00100 Cyclic nucleotide-monophosphate binding domain BG03_390 SM01234 BG03_390 BG03_391 SM00947 Carbonic anhydrase BG03_3921 SM00954 Region found in RelA / SpoT proteins BG03_3923 SM01118 BG03_3923 BG03_3929 SM00155 Phospholipase D. Active site motifs. BG03_3936 SM00382 ATPases associated with a variety of cellular activities BG03_3937 SM00382 ATPases associated with a variety of cellular activities BG03_3945 SM00825 Beta-ketoacyl synthase BG03_3952 SM00382 ATPases associated with a variety of cellular activities BG03_3952 SM01086 C-terminal, D2-small domain, of ClpB protein BG03_3966 SM00316 Ribosomal protein S1-like RNA-binding domain BG03_3968 SM00530 Helix-turn-helix XRE-family like proteins BG03_3970 SM00642 Alpha-amylase domain BG03_3972 SM01060 BG03_3972 BG03_3996 SM00357 Cold shock protein domain BG03_4009 SM00448 cheY-homologous receiver domain BG03_4009 SM00862 Transcriptional regulatory protein, C terminal BG03_4010 SM00387 Histidine kinase-like ATPases BG03_4010 SM00388 His Kinase A (phosphoacceptor) domain BG03_4013 SM00342 helix_turn_helix, arabinose operon control protein BG03_4013 SM00871 Bacterial transcription activator, effector binding domain BG03_4018 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BG03_4027 SM00849 Metallo-beta-lactamase superfamily BG03_4029 SM00354 helix_turn _helix lactose operon repressor BG03_4056 SM00382 ATPases associated with a variety of cellular activities BG03_4059 SM00347 helix_turn_helix multiple antibiotic resistance protein BG03_406 SM00382 ATPases associated with a variety of cellular activities BG03_4080 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BG03_4088 SM00829 Enoylreductase BG03_4090 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG03_4090 SM00895 BG03_4090 BG03_4099 SM00387 Histidine kinase-like ATPases BG03_4099 SM00388 His Kinase A (phosphoacceptor) domain BG03_4099 SM00448 cheY-homologous receiver domain BG03_4100 SM00138 Methyltransferase, chemotaxis proteins BG03_4101 SM00331 Sigma factor PP2C-like phosphatases BG03_4101 SM00448 cheY-homologous receiver domain BG03_4116 SM00460 Transglutaminase/protease-like homologues BG03_4118 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BG03_412 SM00387 Histidine kinase-like ATPases BG03_412 SM00388 His Kinase A (phosphoacceptor) domain BG03_4121 SM00028 Tetratricopeptide repeats BG03_4123 SM01120 BG03_4123 BG03_413 SM00387 Histidine kinase-like ATPases BG03_4130 SM00347 helix_turn_helix multiple antibiotic resistance protein BG03_4145 SM00382 ATPases associated with a variety of cellular activities BG03_4158 SM00487 DEAD-like helicases superfamily BG03_4170 SM00448 cheY-homologous receiver domain BG03_4171 SM00091 PAS domain BG03_4171 SM00387 Histidine kinase-like ATPases BG03_4178 SM00530 Helix-turn-helix XRE-family like proteins BG03_4182 SM00287 Bacterial SH3 domain homologues BG03_4182 SM00644 BG03_4182 BG03_4202 SM00646 BG03_4202 BG03_4215 SM00957 SecA DEAD-like domain BG03_4215 SM00958 SecA preprotein cross-linking domain BG03_4222 SM00422 helix_turn_helix, mercury resistance BG03_4227 SM00729 Elongator protein 3, MiaB family, Radical SAM BG03_4228 SM00644 BG03_4228 BG03_4243 SM00382 ATPases associated with a variety of cellular activities BG03_4245 SM00062 Bacterial periplasmic substrate-binding proteins BG03_4245 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BG03_4246 SM00382 ATPases associated with a variety of cellular activities BG03_4247 SM00382 ATPases associated with a variety of cellular activities BG03_4259 SM00849 Metallo-beta-lactamase superfamily BG03_4261 SM00382 ATPases associated with a variety of cellular activities BG03_4263 SM00382 ATPases associated with a variety of cellular activities BG03_4265 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG03_4265 SM00387 Histidine kinase-like ATPases BG03_4265 SM00388 His Kinase A (phosphoacceptor) domain BG03_4266 SM00448 cheY-homologous receiver domain BG03_4266 SM00862 Transcriptional regulatory protein, C terminal BG03_4272 SM00422 helix_turn_helix, mercury resistance BG03_4275 SM00344 helix_turn_helix ASNC type BG03_428 SM00852 Probable molybdopterin binding domain BG03_4295 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen BG03_4307 SM00382 ATPases associated with a variety of cellular activities BG03_4309 SM00287 Bacterial SH3 domain homologues BG03_431 SM00014 Acid phosphatase homologues BG03_4319 SM00829 Enoylreductase BG03_4324 SM00450 Rhodanese Homology Domain BG03_4325 SM00450 Rhodanese Homology Domain BG03_4329 SM00450 Rhodanese Homology Domain BG03_4329 SM00849 Metallo-beta-lactamase superfamily BG03_4330 SM00450 Rhodanese Homology Domain BG03_4332 SM00450 Rhodanese Homology Domain BG03_4354 SM00382 ATPases associated with a variety of cellular activities BG03_4359 SM00347 helix_turn_helix multiple antibiotic resistance protein BG03_4376 SM00382 ATPases associated with a variety of cellular activities BG03_4378 SM00287 Bacterial SH3 domain homologues BG03_4381 SM00116 Domain in cystathionine beta-synthase and other proteins. BG03_441 SM00382 ATPases associated with a variety of cellular activities BG03_4412 SM00899 BG03_4412 BG03_443 SM00729 Elongator protein 3, MiaB family, Radical SAM BG03_4430 SM00530 Helix-turn-helix XRE-family like proteins BG03_4439 SM00530 Helix-turn-helix XRE-family like proteins BG03_4441 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BG03_4448 SM00770 Zinc dependent phospholipase C (alpha toxin) BG03_4450 SM00829 Enoylreductase BG03_4456 SM00382 ATPases associated with a variety of cellular activities BG03_4459 SM00354 helix_turn _helix lactose operon repressor BG03_4461 SM00347 helix_turn_helix multiple antibiotic resistance protein BG03_4463 SM00382 ATPases associated with a variety of cellular activities BG03_4464 SM00382 ATPases associated with a variety of cellular activities BG03_447 SM00382 ATPases associated with a variety of cellular activities BG03_4472 SM00448 cheY-homologous receiver domain BG03_4472 SM00862 Transcriptional regulatory protein, C terminal BG03_4473 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG03_4473 SM00387 Histidine kinase-like ATPases BG03_4473 SM00388 His Kinase A (phosphoacceptor) domain BG03_4483 SM00062 Bacterial periplasmic substrate-binding proteins BG03_4483 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BG03_4484 SM00382 ATPases associated with a variety of cellular activities BG03_4489 SM00421 helix_turn_helix, Lux Regulon BG03_4489 SM00448 cheY-homologous receiver domain BG03_4490 SM00387 Histidine kinase-like ATPases BG03_4494 SM00642 Alpha-amylase domain BG03_4496 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG03_4496 SM00866 BG03_4496 BG03_4498 SM00052 Putative diguanylate phosphodiesterase BG03_4498 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BG03_4498 SM00267 diguanylate cyclase BG03_45 SM00028 Tetratricopeptide repeats BG03_4501 SM00155 Phospholipase D. Active site motifs. BG03_4502 SM00382 ATPases associated with a variety of cellular activities BG03_4503 SM00327 von Willebrand factor (vWF) type A domain BG03_4509 SM00382 ATPases associated with a variety of cellular activities BG03_4515 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BG03_4518 SM01091 Transporter associated domain BG03_4529 SM00028 Tetratricopeptide repeats BG03_4529 SM00530 Helix-turn-helix XRE-family like proteins BG03_4532 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BG03_4534 SM01002 Alanine dehydrogenase/PNT, C-terminal domain BG03_4534 SM01003 Alanine dehydrogenase/PNT, N-terminal domain BG03_4537 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BG03_4537 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BG03_4541 SM00448 cheY-homologous receiver domain BG03_4541 SM00862 Transcriptional regulatory protein, C terminal BG03_4542 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG03_4542 SM00387 Histidine kinase-like ATPases BG03_4542 SM00388 His Kinase A (phosphoacceptor) domain BG03_4544 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG03_4547 SM00919 Malic enzyme, NAD binding domain BG03_4547 SM01274 BG03_4547 BG03_4549 SM00448 cheY-homologous receiver domain BG03_4550 SM00387 Histidine kinase-like ATPases BG03_4551 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BG03_4551 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG03_4554 SM00387 Histidine kinase-like ATPases BG03_4554 SM00388 His Kinase A (phosphoacceptor) domain BG03_4555 SM00448 cheY-homologous receiver domain BG03_4555 SM00862 Transcriptional regulatory protein, C terminal BG03_4557 SM00248 ankyrin repeats BG03_4561 SM00448 cheY-homologous receiver domain BG03_4562 SM00091 PAS domain BG03_4562 SM00387 Histidine kinase-like ATPases BG03_4563 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BG03_4563 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG03_4564 SM00244 prohibitin homologues BG03_4566 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins BG03_4569 SM00365 Leucine-rich repeat, SDS22-like subfamily BG03_4569 SM00369 Leucine-rich repeats, typical (most populated) subfamily BG03_4569 SM00725 NEAr Transporter domain BG03_4570 SM00448 cheY-homologous receiver domain BG03_4570 SM00850 LytTr DNA-binding domain BG03_4573 SM00793 Accessory gene regulator B BG03_4581 SM00382 ATPases associated with a variety of cellular activities BG03_4591 SM00763 PrkA AAA domain BG03_4593 SM00052 Putative diguanylate phosphodiesterase BG03_4593 SM00091 PAS domain BG03_4593 SM00267 diguanylate cyclase BG03_4596 SM00567 E-Z type HEAT repeats BG03_462 SM00450 Rhodanese Homology Domain BG03_4628 SM00382 ATPases associated with a variety of cellular activities BG03_4632 SM00382 ATPases associated with a variety of cellular activities BG03_4637 SM00478 endonuclease III BG03_4637 SM00525 BG03_4637 BG03_4653 SM00984 UDP binding domain BG03_466 SM00729 Elongator protein 3, MiaB family, Radical SAM BG03_4664 SM00530 Helix-turn-helix XRE-family like proteins BG03_4668 SM00382 ATPases associated with a variety of cellular activities BG03_4672 SM00478 endonuclease III BG03_469 SM00852 Probable molybdopterin binding domain BG03_4690 SM00226 Low molecular weight phosphatase family BG03_4692 SM00831 Cation transporter/ATPase, N-terminus BG03_4701 SM00946 Prolyl-tRNA synthetase, C-terminal BG03_4706 SM00530 Helix-turn-helix XRE-family like proteins BG03_4713 SM00060 Fibronectin type 3 domain BG03_4713 SM00636 BG03_4713 BG03_4713 SM00637 BG03_4713 BG03_4714 SM00382 ATPases associated with a variety of cellular activities BG03_4716 SM00382 ATPases associated with a variety of cellular activities BG03_4720 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BG03_4720 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG03_4724 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BG03_4724 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BG03_4724 SM00493 BG03_4724 BG03_4728 SM00642 Alpha-amylase domain BG03_4730 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BG03_4730 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG03_4731 SM00382 ATPases associated with a variety of cellular activities BG03_4732 SM00062 Bacterial periplasmic substrate-binding proteins BG03_4732 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BG03_4752 SM01007 Class II Aldolase and Adducin N-terminal domain BG03_476 SM01058 CarD-like/TRCF domain BG03_4761 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BG03_4765 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BG03_4765 SM00387 Histidine kinase-like ATPases BG03_4765 SM00388 His Kinase A (phosphoacceptor) domain BG03_4774 SM00382 ATPases associated with a variety of cellular activities BG03_4778 SM00046 Diacylglycerol kinase catalytic domain (presumed) BG03_4779 SM00845 GatB domain BG03_4783 SM00347 helix_turn_helix multiple antibiotic resistance protein BG03_4789 SM00382 ATPases associated with a variety of cellular activities BG03_4789 SM00930 BG03_4789 BG03_4795 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BG03_4795 SM00292 breast cancer carboxy-terminal domain BG03_4795 SM00532 Ligase N family BG03_4799 SM00244 prohibitin homologues BG03_4801 SM01209 BG03_4801 BG03_4801 SM01210 BG03_4801 BG03_4802 SM00798 AICARFT/IMPCHase bienzyme BG03_4802 SM00851 MGS-like domain BG03_4807 SM01211 BG03_4807 BG03_481 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BG03_4810 SM00998 Adenylosuccinate lyase C-terminus BG03_4812 SM01001 AIR carboxylase BG03_4824 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG03_4846 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG03_4846 SM00387 Histidine kinase-like ATPases BG03_4846 SM00388 His Kinase A (phosphoacceptor) domain BG03_4847 SM00448 cheY-homologous receiver domain BG03_4847 SM00862 Transcriptional regulatory protein, C terminal BG03_485 SM00363 S4 RNA-binding domain BG03_4851 SM00883 Chaperonin 10 Kd subunit BG03_4854 SM00881 CoA binding domain BG03_4855 SM00382 ATPases associated with a variety of cellular activities BG03_486 SM00420 helix_turn_helix, Deoxyribose operon repressor BG03_4877 SM00731 SprT homologues. BG03_4878 SM00316 Ribosomal protein S1-like RNA-binding domain BG03_4878 SM00732 Likely ribonuclease with RNase H fold. BG03_4881 SM01005 Alanine racemase, C-terminal domain BG03_4886 SM00487 DEAD-like helicases superfamily BG03_4886 SM00490 helicase superfamily c-terminal domain BG03_489 SM00642 Alpha-amylase domain BG03_4900 SM00382 ATPases associated with a variety of cellular activities BG03_4901 SM00382 ATPases associated with a variety of cellular activities BG03_4909 SM00382 ATPases associated with a variety of cellular activities BG03_4910 SM00421 helix_turn_helix, Lux Regulon BG03_4910 SM00448 cheY-homologous receiver domain BG03_4911 SM00387 Histidine kinase-like ATPases BG03_4912 SM00382 ATPases associated with a variety of cellular activities BG03_4922 SM00354 helix_turn _helix lactose operon repressor BG03_4924 SM00563 Phosphate acyltransferases BG03_493 SM00849 Metallo-beta-lactamase superfamily BG03_4942 SM00382 ATPases associated with a variety of cellular activities BG03_4943 SM00382 ATPases associated with a variety of cellular activities BG03_4954 SM00829 Enoylreductase BG03_4985 SM01251 BG03_4985 BG03_4988 SM00646 BG03_4988 BG03_4994 SM00382 ATPases associated with a variety of cellular activities BG03_4995 SM00382 ATPases associated with a variety of cellular activities BG03_4997 SM00662 RNA polymerases D BG03_5 SM00984 UDP binding domain BG03_5001 SM00316 Ribosomal protein S1-like RNA-binding domain BG03_501 SM00646 BG03_501 BG03_5013 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. BG03_5014 SM01374 BG03_5014 BG03_5018 SM00322 K homology RNA-binding domain BG03_502 SM00382 ATPases associated with a variety of cellular activities BG03_502 SM00843 BG03_502 BG03_5021 SM01382 BG03_5021 BG03_5021 SM01383 BG03_5021 BG03_5025 SM01403 BG03_5025 BG03_5027 SM00838 Elongation factor G C-terminus BG03_5027 SM00889 Elongation factor G, domain IV BG03_5031 SM00663 RNA polymerase I subunit A N-terminus BG03_5037 SM00649 Ribosomal protein L11/L12 BG03_5038 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. BG03_5040 SM00421 helix_turn_helix, Lux Regulon BG03_5042 SM00967 RNA 2'-O ribose methyltransferase substrate binding BG03_5043 SM00535 Ribonuclease III family BG03_5044 SM00840 BG03_5044 BG03_5049 SM00670 Large family of predicted nucleotide-binding domains BG03_5051 SM00382 ATPases associated with a variety of cellular activities BG03_5052 SM00382 ATPases associated with a variety of cellular activities BG03_5052 SM01086 C-terminal, D2-small domain, of ClpB protein BG03_507 SM00422 helix_turn_helix, mercury resistance BG03_5074 SM00530 Helix-turn-helix XRE-family like proteins BG03_5076 SM00905 Dihydroneopterin aldolase BG03_5084 SM00382 ATPases associated with a variety of cellular activities BG03_5086 SM00977 TilS substrate C-terminal domain BG03_5087 SM00331 Sigma factor PP2C-like phosphatases BG03_5087 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain BG03_5090 SM00316 Ribosomal protein S1-like RNA-binding domain BG03_5094 SM00363 S4 RNA-binding domain BG03_5097 SM00966 SpoVT / AbrB like domain BG03_5098 SM00487 DEAD-like helicases superfamily BG03_5098 SM00490 helicase superfamily c-terminal domain BG03_5098 SM00982 BG03_5098 BG03_5098 SM01058 CarD-like/TRCF domain BG03_5102 SM01400 BG03_5102 BG03_5111 SM00650 Ribosomal RNA adenine dimethylases BG03_5112 SM00493 BG03_5112 BG03_5115 SM00966 SpoVT / AbrB like domain BG03_5131 SM00493 BG03_5131 BG03_5133 SM00382 ATPases associated with a variety of cellular activities BG03_5143 SM00936 Penicillin-binding protein 5, C-terminal domain BG03_5144 SM00116 Domain in cystathionine beta-synthase and other proteins. BG03_5144 SM01240 BG03_5144 BG03_5151 SM00434 DNA Topoisomerase IV BG03_5152 SM00387 Histidine kinase-like ATPases BG03_5152 SM00433 TopoisomeraseII BG03_5155 SM00480 DNA polymerase III beta subunit BG03_5156 SM00382 ATPases associated with a variety of cellular activities BG03_5156 SM00760 Bacterial dnaA protein helix-turn-helix domain BG03_5160 SM00393 Putative single-stranded nucleic acids-binding domain BG03_5160 SM01245 BG03_5160 BG03_5162 SM01228 BG03_5162 BG03_5164 SM00470 ParB-like nuclease domain BG03_5166 SM00470 ParB-like nuclease domain BG03_517 SM00354 helix_turn _helix lactose operon repressor BG03_5175 SM00267 diguanylate cyclase BG03_5178 SM00788 Adenylosuccinate synthetase BG03_5183 SM00448 cheY-homologous receiver domain BG03_5183 SM00862 Transcriptional regulatory protein, C terminal BG03_5184 SM00091 PAS domain BG03_5184 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG03_5184 SM00387 Histidine kinase-like ATPases BG03_5184 SM00388 His Kinase A (phosphoacceptor) domain BG03_5187 SM00849 Metallo-beta-lactamase superfamily BG03_5188 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BG03_5194 SM01240 BG03_5194 BG03_5196 SM00487 DEAD-like helicases superfamily BG03_5196 SM00490 helicase superfamily c-terminal domain BG03_5207 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BG03_5207 SM00387 Histidine kinase-like ATPases BG03_5208 SM00448 cheY-homologous receiver domain BG03_5208 SM00850 LytTr DNA-binding domain BG03_5219 SM00382 ATPases associated with a variety of cellular activities BG03_5224 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BG03_523 SM00448 cheY-homologous receiver domain BG03_523 SM00862 Transcriptional regulatory protein, C terminal BG03_523 SM01043 Bacterial transcriptional activator domain BG03_5230 SM00448 cheY-homologous receiver domain BG03_5230 SM00850 LytTr DNA-binding domain BG03_5233 SM00267 diguanylate cyclase BG03_5235 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BG03_5236 SM00421 helix_turn_helix, Lux Regulon BG03_5236 SM00448 cheY-homologous receiver domain BG03_5238 SM00100 Cyclic nucleotide-monophosphate binding domain BG03_524 SM00327 von Willebrand factor (vWF) type A domain BG03_5245 SM00354 helix_turn _helix lactose operon repressor BG03_5247 SM00382 ATPases associated with a variety of cellular activities BG03_5249 SM00986 Uracil DNA glycosylase superfamily BG03_5249 SM00987 UreE urease accessory protein, C-terminal domain BG03_5258 SM00936 Penicillin-binding protein 5, C-terminal domain BG03_5266 SM00382 ATPases associated with a variety of cellular activities BG03_5268 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BG03_527 SM00387 Histidine kinase-like ATPases BG03_527 SM00388 His Kinase A (phosphoacceptor) domain BG03_527 SM00448 cheY-homologous receiver domain BG03_5274 SM00422 helix_turn_helix, mercury resistance BG03_5282 SM00836 DALR anticodon binding domain BG03_5282 SM01016 Arginyl tRNA synthetase N terminal dom BG03_5290 SM00382 ATPases associated with a variety of cellular activities BG03_5293 SM00421 helix_turn_helix, Lux Regulon BG03_5293 SM00448 cheY-homologous receiver domain BG03_5295 SM00530 Helix-turn-helix XRE-family like proteins BG03_5296 SM00052 Putative diguanylate phosphodiesterase BG03_5296 SM00267 diguanylate cyclase BG03_5298 SM00155 Phospholipase D. Active site motifs. BG03_5308 SM00448 cheY-homologous receiver domain BG03_531 SM00116 Domain in cystathionine beta-synthase and other proteins. BG03_5312 SM00357 Cold shock protein domain BG03_5312 SM00382 ATPases associated with a variety of cellular activities BG03_5312 SM00959 Rho termination factor, N-terminal domain BG03_5315 SM00937 BG03_5315 BG03_5323 SM00903 Flavin reductase like domain BG03_5326 SM00226 Low molecular weight phosphatase family BG03_5339 SM00382 ATPases associated with a variety of cellular activities BG03_534 SM01266 BG03_534 BG03_5343 SM00052 Putative diguanylate phosphodiesterase BG03_5343 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BG03_5343 SM00091 PAS domain BG03_5343 SM00267 diguanylate cyclase BG03_5360 SM00850 LytTr DNA-binding domain BG03_5361 SM00382 ATPases associated with a variety of cellular activities BG03_5372 SM00382 ATPases associated with a variety of cellular activities BG03_5379 SM00448 cheY-homologous receiver domain BG03_5379 SM00862 Transcriptional regulatory protein, C terminal BG03_538 SM00363 S4 RNA-binding domain BG03_5380 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG03_5380 SM00387 Histidine kinase-like ATPases BG03_5380 SM00388 His Kinase A (phosphoacceptor) domain BG03_5386 SM00382 ATPases associated with a variety of cellular activities BG03_5396 SM00487 DEAD-like helicases superfamily BG03_5396 SM00490 helicase superfamily c-terminal domain BG03_5402 SM00287 Bacterial SH3 domain homologues BG03_5408 SM00287 Bacterial SH3 domain homologues BG03_542 SM00363 S4 RNA-binding domain BG03_542 SM01390 BG03_542 BG03_5446 SM01350 BG03_5446 BG03_5449 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG03_5449 SM00895 BG03_5449 BG03_5464 SM00287 Bacterial SH3 domain homologues BG03_5481 SM00823 Phosphopantetheine attachment site BG03_5482 SM00823 Phosphopantetheine attachment site BG03_5486 SM01321 BG03_5486 BG03_550 SM00981 BG03_550 BG03_5501 SM00530 Helix-turn-helix XRE-family like proteins BG03_5513 SM00448 cheY-homologous receiver domain BG03_5513 SM00862 Transcriptional regulatory protein, C terminal BG03_5514 SM00387 Histidine kinase-like ATPases BG03_5515 SM00382 ATPases associated with a variety of cellular activities BG03_5532 SM00530 Helix-turn-helix XRE-family like proteins BG03_5546 SM00382 ATPases associated with a variety of cellular activities BG03_5548 SM00448 cheY-homologous receiver domain BG03_5548 SM00862 Transcriptional regulatory protein, C terminal BG03_5549 SM00387 Histidine kinase-like ATPases BG03_5549 SM00388 His Kinase A (phosphoacceptor) domain BG03_5551 SM01321 BG03_5551 BG03_5555 SM00770 Zinc dependent phospholipase C (alpha toxin) BG03_5560 SM00382 ATPases associated with a variety of cellular activities BG03_5562 SM00825 Beta-ketoacyl synthase BG03_5578 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BG03_5589 SM00047 Lysozyme subfamily 2 BG03_5590 SM00530 Helix-turn-helix XRE-family like proteins BG03_5598 SM00530 Helix-turn-helix XRE-family like proteins BG03_5600 SM00382 ATPases associated with a variety of cellular activities BG03_5604 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BG03_5604 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG03_5605 SM00319 Homologues of the ligand binding domain of Tar BG03_5613 SM00148 Phospholipase C, catalytic domain (part); domain X BG03_5614 SM00060 Fibronectin type 3 domain BG03_5634 SM00382 ATPases associated with a variety of cellular activities BG03_5637 SM00327 von Willebrand factor (vWF) type A domain BG03_5649 SM00382 ATPases associated with a variety of cellular activities BG03_5664 SM00354 helix_turn _helix lactose operon repressor BG03_5669 SM01321 BG03_5669 BG03_5672 SM00530 Helix-turn-helix XRE-family like proteins BG03_5673 SM00530 Helix-turn-helix XRE-family like proteins BG03_5676 SM00382 ATPases associated with a variety of cellular activities BG03_5706 SM00710 Parallel beta-helix repeats BG03_5727 SM00849 Metallo-beta-lactamase superfamily BG03_5735 SM00257 Lysin motif BG03_5736 SM00421 helix_turn_helix, Lux Regulon BG03_5736 SM00448 cheY-homologous receiver domain BG03_5737 SM00387 Histidine kinase-like ATPases BG03_5738 SM00411 bacterial (prokaryotic) histone like domain BG03_574 SM01002 Alanine dehydrogenase/PNT, C-terminal domain BG03_574 SM01003 Alanine dehydrogenase/PNT, N-terminal domain BG03_5747 SM00752 Horizontally Transferred TransMembrane Domain BG03_5749 SM00422 helix_turn_helix, mercury resistance BG03_576 SM00530 Helix-turn-helix XRE-family like proteins BG03_588 SM00849 Metallo-beta-lactamase superfamily BG03_590 SM00116 Domain in cystathionine beta-synthase and other proteins. BG03_598 SM00481 DNA polymerase alpha chain like domain BG03_599 SM00919 Malic enzyme, NAD binding domain BG03_599 SM01274 BG03_599 BG03_600 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG03_609 SM01329 BG03_609 BG03_614 SM00448 cheY-homologous receiver domain BG03_614 SM00862 Transcriptional regulatory protein, C terminal BG03_615 SM00091 PAS domain BG03_615 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG03_615 SM00387 Histidine kinase-like ATPases BG03_615 SM00388 His Kinase A (phosphoacceptor) domain BG03_616 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs BG03_616 SM00474 3'-5' exonuclease BG03_616 SM00475 5'-3' exonuclease BG03_616 SM00482 DNA polymerase A domain BG03_617 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain BG03_617 SM01232 BG03_617 BG03_620 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BG03_625 SM00382 ATPases associated with a variety of cellular activities BG03_627 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BG03_639 SM00967 RNA 2'-O ribose methyltransferase substrate binding BG03_641 SM00873 B3/4 domain BG03_641 SM00874 tRNA synthetase B5 domain BG03_641 SM00896 Ferredoxin-fold anticodon binding domain BG03_645 SM00382 ATPases associated with a variety of cellular activities BG03_649 SM00271 DnaJ molecular chaperone homology domain BG03_65 SM00954 Region found in RelA / SpoT proteins BG03_653 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BG03_653 SM00481 DNA polymerase alpha chain like domain BG03_653 SM00483 DNA polymerase X family BG03_654 SM00463 Small MutS-related domain BG03_654 SM00533 DNA-binding domain of DNA mismatch repair MUTS family BG03_654 SM00534 ATPase domain of DNA mismatch repair MUTS family BG03_656 SM00363 S4 RNA-binding domain BG03_658 SM00725 NEAr Transporter domain BG03_659 SM00725 NEAr Transporter domain BG03_660 SM00725 NEAr Transporter domain BG03_663 SM00382 ATPases associated with a variety of cellular activities BG03_666 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase BG03_669 SM00448 cheY-homologous receiver domain BG03_669 SM00862 Transcriptional regulatory protein, C terminal BG03_670 SM00387 Histidine kinase-like ATPases BG03_670 SM00388 His Kinase A (phosphoacceptor) domain BG03_671 SM00382 ATPases associated with a variety of cellular activities BG03_682 SM00893 Electron transfer flavoprotein domain BG03_683 SM00893 Electron transfer flavoprotein domain BG03_685 SM00465 GIY-YIG type nucleases (URI domain) BG03_69 SM00530 Helix-turn-helix XRE-family like proteins BG03_695 SM00382 ATPases associated with a variety of cellular activities BG03_700 SM00530 Helix-turn-helix XRE-family like proteins BG03_704 SM00421 helix_turn_helix, Lux Regulon BG03_711 SM00909 Sporulation and spore germination BG03_723 SM00382 ATPases associated with a variety of cellular activities BG03_723 SM00994 ClpX C4-type zinc finger BG03_723 SM01086 C-terminal, D2-small domain, of ClpB protein BG03_724 SM00382 ATPases associated with a variety of cellular activities BG03_725 SM00382 ATPases associated with a variety of cellular activities BG03_725 SM00464 Found in ATP-dependent protease La (LON) BG03_728 SM00347 helix_turn_helix multiple antibiotic resistance protein BG03_733 SM01004 Delta-aminolevulinic acid dehydratase BG03_735 SM00257 Lysin motif BG03_753 SM01317 BG03_753 BG03_755 SM00448 cheY-homologous receiver domain BG03_755 SM00862 Transcriptional regulatory protein, C terminal BG03_756 SM00387 Histidine kinase-like ATPases BG03_757 SM00382 ATPases associated with a variety of cellular activities BG03_767 SM00257 Lysin motif BG03_770 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BG03_774 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BG03_775 SM00382 ATPases associated with a variety of cellular activities BG03_779 SM01323 BG03_779 BG03_78 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BG03_788 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BG03_788 SM00954 Region found in RelA / SpoT proteins BG03_795 SM00382 ATPases associated with a variety of cellular activities BG03_796 SM00382 ATPases associated with a variety of cellular activities BG03_800 SM00028 Tetratricopeptide repeats BG03_807 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BG03_809 SM00732 Likely ribonuclease with RNase H fold. BG03_82 SM01192 BG03_82 BG03_82 SM01193 BG03_82 BG03_828 SM00382 ATPases associated with a variety of cellular activities BG03_833 SM00530 Helix-turn-helix XRE-family like proteins BG03_843 SM00855 Phosphoglycerate mutase family BG03_848 SM00098 Alkaline phosphatase homologues BG03_850 SM00954 Region found in RelA / SpoT proteins BG03_861 SM01103 BG03_861 BG03_863 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BG03_867 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BG03_869 SM00849 Metallo-beta-lactamase superfamily BG03_875 SM00838 Elongation factor G C-terminus BG03_877 SM00729 Elongator protein 3, MiaB family, Radical SAM BG03_88 SM00316 Ribosomal protein S1-like RNA-binding domain BG03_88 SM00357 Cold shock protein domain BG03_88 SM00955 BG03_88 BG03_881 SM00271 DnaJ molecular chaperone homology domain BG03_884 SM00729 Elongator protein 3, MiaB family, Radical SAM BG03_890 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BG03_897 SM00116 Domain in cystathionine beta-synthase and other proteins. BG03_899 SM00400 zinc finger BG03_899 SM00493 BG03_899 BG03_899 SM00766 DNA primase DnaG DnaB-binding BG03_906 SM00487 DEAD-like helicases superfamily BG03_906 SM00490 helicase superfamily c-terminal domain BG03_907 SM00518 AP endonuclease family 2 BG03_91 SM00448 cheY-homologous receiver domain BG03_91 SM00862 Transcriptional regulatory protein, C terminal BG03_910 SM00382 ATPases associated with a variety of cellular activities BG03_923 SM00382 ATPases associated with a variety of cellular activities BG03_931 SM00849 Metallo-beta-lactamase superfamily BG03_933 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BG03_938 SM01018 B12 binding domain BG03_949 SM00857 Resolvase, N terminal domain BG03_95 SM00382 ATPases associated with a variety of cellular activities BG03_952 SM00857 Resolvase, N terminal domain BG03_968 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. BG03_976 SM00487 DEAD-like helicases superfamily BG03_976 SM00490 helicase superfamily c-terminal domain BG03_982 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG03_983 SM00382 ATPases associated with a variety of cellular activities BG03_993 SM00354 helix_turn _helix lactose operon repressor BG03_995 SM00450 Rhodanese Homology Domain