FORC48_0001 SM00382 ATPases associated with a variety of cellular activities FORC48_0001 SM00760 Bacterial dnaA protein helix-turn-helix domain FORC48_0002 SM00480 DNA polymerase III beta subunit FORC48_0005 SM00387 Histidine kinase-like ATPases FORC48_0005 SM00433 TopoisomeraseII FORC48_0006 SM00434 DNA Topoisomerase IV FORC48_0008 SM00116 Domain in cystathionine beta-synthase and other proteins. FORC48_0008 SM01240 FORC48_0008 FORC48_0009 SM00936 Penicillin-binding protein 5, C-terminal domain FORC48_0018 SM00382 ATPases associated with a variety of cellular activities FORC48_0020 SM00493 FORC48_0020 FORC48_0032 SM00966 SpoVT / AbrB like domain FORC48_0035 SM00493 FORC48_0035 FORC48_0036 SM00650 Ribosomal RNA adenine dimethylases FORC48_0045 SM01400 FORC48_0045 FORC48_0048 SM00487 DEAD-like helicases superfamily FORC48_0048 SM00490 helicase superfamily c-terminal domain FORC48_0048 SM00982 FORC48_0048 FORC48_0048 SM01058 CarD-like/TRCF domain FORC48_0049 SM00966 SpoVT / AbrB like domain FORC48_0052 SM00363 S4 RNA-binding domain FORC48_0056 SM00316 Ribosomal protein S1-like RNA-binding domain FORC48_0057 SM00331 Sigma factor PP2C-like phosphatases FORC48_0057 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain FORC48_0058 SM00977 TilS substrate C-terminal domain FORC48_0060 SM00382 ATPases associated with a variety of cellular activities FORC48_0068 SM00905 Dihydroneopterin aldolase FORC48_0070 SM00530 Helix-turn-helix XRE-family like proteins FORC48_0077 SM00382 ATPases associated with a variety of cellular activities FORC48_0077 SM01086 C-terminal, D2-small domain, of ClpB protein FORC48_0078 SM00382 ATPases associated with a variety of cellular activities FORC48_0080 SM00670 Large family of predicted nucleotide-binding domains FORC48_0085 SM00840 FORC48_0085 FORC48_0086 SM00535 Ribonuclease III family FORC48_0087 SM00967 RNA 2'-O ribose methyltransferase substrate binding FORC48_0089 SM00421 helix_turn_helix, Lux Regulon FORC48_0091 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. FORC48_0092 SM00649 Ribosomal protein L11/L12 FORC48_0098 SM00663 RNA polymerase I subunit A N-terminus FORC48_0102 SM00838 Elongation factor G C-terminus FORC48_0102 SM00889 Elongation factor G, domain IV FORC48_0104 SM01403 FORC48_0104 FORC48_0108 SM01382 FORC48_0108 FORC48_0108 SM01383 FORC48_0108 FORC48_0111 SM00322 K homology RNA-binding domain FORC48_0115 SM01374 FORC48_0115 FORC48_0116 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. FORC48_0128 SM00316 Ribosomal protein S1-like RNA-binding domain FORC48_0132 SM00662 RNA polymerases D FORC48_0134 SM00382 ATPases associated with a variety of cellular activities FORC48_0135 SM00382 ATPases associated with a variety of cellular activities FORC48_0141 SM00646 FORC48_0141 FORC48_0144 SM01251 FORC48_0144 FORC48_0162 SM00382 ATPases associated with a variety of cellular activities FORC48_0162 SM00930 FORC48_0162 FORC48_0165 SM00829 Enoylreductase FORC48_0175 SM00382 ATPases associated with a variety of cellular activities FORC48_0176 SM00382 ATPases associated with a variety of cellular activities FORC48_0179 SM00342 helix_turn_helix, arabinose operon control protein FORC48_0197 SM00563 Phosphate acyltransferases FORC48_0200 SM00354 helix_turn _helix lactose operon repressor FORC48_0211 SM00382 ATPases associated with a variety of cellular activities FORC48_0216 SM00382 ATPases associated with a variety of cellular activities FORC48_0217 SM00382 ATPases associated with a variety of cellular activities FORC48_0231 SM00487 DEAD-like helicases superfamily FORC48_0231 SM00490 helicase superfamily c-terminal domain FORC48_0236 SM01005 Alanine racemase, C-terminal domain FORC48_0239 SM00316 Ribosomal protein S1-like RNA-binding domain FORC48_0239 SM00732 Likely ribonuclease with RNase H fold. FORC48_0241 SM00731 SprT homologues. FORC48_0246 SM00382 ATPases associated with a variety of cellular activities FORC48_0247 SM00881 CoA binding domain FORC48_0250 SM00883 Chaperonin 10 Kd subunit FORC48_0254 SM00448 cheY-homologous receiver domain FORC48_0254 SM00862 Transcriptional regulatory protein, C terminal FORC48_0255 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC48_0255 SM00387 Histidine kinase-like ATPases FORC48_0255 SM00388 His Kinase A (phosphoacceptor) domain FORC48_0258 SM01022 FORC48_0258 FORC48_0261 SM00382 ATPases associated with a variety of cellular activities FORC48_0262 SM00387 Histidine kinase-like ATPases FORC48_0263 SM00448 cheY-homologous receiver domain FORC48_0263 SM00862 Transcriptional regulatory protein, C terminal FORC48_0274 SM01001 AIR carboxylase FORC48_0276 SM00998 Adenylosuccinate lyase C-terminus FORC48_0279 SM01211 FORC48_0279 FORC48_0284 SM00798 AICARFT/IMPCHase bienzyme FORC48_0284 SM00851 MGS-like domain FORC48_0285 SM01209 FORC48_0285 FORC48_0285 SM01210 FORC48_0285 FORC48_0287 SM00244 prohibitin homologues FORC48_0292 SM00278 Helix-hairpin-helix DNA-binding motif class 1 FORC48_0292 SM00292 breast cancer carboxy-terminal domain FORC48_0292 SM00532 Ligase N family FORC48_0297 SM00382 ATPases associated with a variety of cellular activities FORC48_0297 SM00930 FORC48_0297 FORC48_0303 SM00347 helix_turn_helix multiple antibiotic resistance protein FORC48_0307 SM00845 GatB domain FORC48_0308 SM00046 Diacylglycerol kinase catalytic domain (presumed) FORC48_0311 SM00382 ATPases associated with a variety of cellular activities FORC48_0325 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain FORC48_0334 SM01007 Class II Aldolase and Adducin N-terminal domain FORC48_0346 SM00387 Histidine kinase-like ATPases FORC48_0346 SM00388 His Kinase A (phosphoacceptor) domain FORC48_0355 SM00062 Bacterial periplasmic substrate-binding proteins FORC48_0355 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. FORC48_0356 SM00382 ATPases associated with a variety of cellular activities FORC48_0357 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FORC48_0357 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC48_0363 SM00100 Cyclic nucleotide-monophosphate binding domain FORC48_0363 SM00419 helix_turn_helix, cAMP Regulatory protein FORC48_0366 SM00642 Alpha-amylase domain FORC48_0370 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain FORC48_0370 SM00437 Bacterial DNA topoisomerase I DNA-binding domain FORC48_0370 SM00493 FORC48_0370 FORC48_0374 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FORC48_0374 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC48_0379 SM00382 ATPases associated with a variety of cellular activities FORC48_0381 SM00060 Fibronectin type 3 domain FORC48_0381 SM00636 FORC48_0381 FORC48_0381 SM00637 FORC48_0381 FORC48_0388 SM00530 Helix-turn-helix XRE-family like proteins FORC48_0392 SM00946 Prolyl-tRNA synthetase, C-terminal FORC48_0401 SM00831 Cation transporter/ATPase, N-terminus FORC48_0403 SM00226 Low molecular weight phosphatase family FORC48_0422 SM00478 endonuclease III FORC48_0426 SM00382 ATPases associated with a variety of cellular activities FORC48_0430 SM00530 Helix-turn-helix XRE-family like proteins FORC48_0441 SM00984 UDP binding domain FORC48_0458 SM00478 endonuclease III FORC48_0458 SM00525 FORC48_0458 FORC48_0465 SM00382 ATPases associated with a variety of cellular activities FORC48_0470 SM00382 ATPases associated with a variety of cellular activities FORC48_0483 SM00567 E-Z type HEAT repeats FORC48_0486 SM00052 Putative diguanylate phosphodiesterase FORC48_0486 SM00091 PAS domain FORC48_0486 SM00267 diguanylate cyclase FORC48_0488 SM00763 PrkA AAA domain FORC48_0490 SM00365 Leucine-rich repeat, SDS22-like subfamily FORC48_0490 SM00725 NEAr Transporter domain FORC48_0493 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins FORC48_0495 SM00244 prohibitin homologues FORC48_0496 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FORC48_0496 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC48_0497 SM00091 PAS domain FORC48_0497 SM00387 Histidine kinase-like ATPases FORC48_0498 SM00448 cheY-homologous receiver domain FORC48_0502 SM00248 ankyrin repeats FORC48_0505 SM00382 ATPases associated with a variety of cellular activities FORC48_0511 SM00448 cheY-homologous receiver domain FORC48_0511 SM00862 Transcriptional regulatory protein, C terminal FORC48_0512 SM00387 Histidine kinase-like ATPases FORC48_0512 SM00388 His Kinase A (phosphoacceptor) domain FORC48_0516 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FORC48_0516 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC48_0517 SM00387 Histidine kinase-like ATPases FORC48_0518 SM00448 cheY-homologous receiver domain FORC48_0520 SM00919 Malic enzyme, NAD binding domain FORC48_0520 SM01274 FORC48_0520 FORC48_0524 SM00345 helix_turn_helix gluconate operon transcriptional repressor FORC48_0526 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC48_0526 SM00387 Histidine kinase-like ATPases FORC48_0526 SM00388 His Kinase A (phosphoacceptor) domain FORC48_0527 SM00448 cheY-homologous receiver domain FORC48_0527 SM00862 Transcriptional regulatory protein, C terminal FORC48_0532 SM00926 Molybdopterin oxidoreductase Fe4S4 domain FORC48_0532 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region FORC48_0535 SM01002 Alanine dehydrogenase/PNT, C-terminal domain FORC48_0535 SM01003 Alanine dehydrogenase/PNT, N-terminal domain FORC48_0538 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor FORC48_0541 SM00028 Tetratricopeptide repeats FORC48_0541 SM00530 Helix-turn-helix XRE-family like proteins FORC48_0551 SM01091 Transporter associated domain FORC48_0554 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor FORC48_0560 SM00382 ATPases associated with a variety of cellular activities FORC48_0565 SM00327 von Willebrand factor (vWF) type A domain FORC48_0566 SM00382 ATPases associated with a variety of cellular activities FORC48_0567 SM00155 Phospholipase D. Active site motifs. FORC48_0569 SM00052 Putative diguanylate phosphodiesterase FORC48_0569 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) FORC48_0569 SM00267 diguanylate cyclase FORC48_0571 SM00345 helix_turn_helix gluconate operon transcriptional repressor FORC48_0571 SM00866 FORC48_0571 FORC48_0573 SM00642 Alpha-amylase domain FORC48_0580 SM00382 ATPases associated with a variety of cellular activities FORC48_0581 SM00062 Bacterial periplasmic substrate-binding proteins FORC48_0581 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. FORC48_0591 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC48_0591 SM00387 Histidine kinase-like ATPases FORC48_0591 SM00388 His Kinase A (phosphoacceptor) domain FORC48_0592 SM00448 cheY-homologous receiver domain FORC48_0592 SM00862 Transcriptional regulatory protein, C terminal FORC48_0601 SM00347 helix_turn_helix multiple antibiotic resistance protein FORC48_0603 SM00354 helix_turn _helix lactose operon repressor FORC48_0606 SM00382 ATPases associated with a variety of cellular activities FORC48_0612 SM00829 Enoylreductase FORC48_0614 SM00770 Zinc dependent phospholipase C (alpha toxin) FORC48_0622 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FORC48_0624 SM00530 Helix-turn-helix XRE-family like proteins FORC48_0637 SM00530 Helix-turn-helix XRE-family like proteins FORC48_0657 SM00899 FORC48_0657 FORC48_0663 SM00116 Domain in cystathionine beta-synthase and other proteins. FORC48_0666 SM00287 Bacterial SH3 domain homologues FORC48_0668 SM00382 ATPases associated with a variety of cellular activities FORC48_0687 SM00347 helix_turn_helix multiple antibiotic resistance protein FORC48_0694 SM00640 Glycosyl hydrolases family 32 FORC48_0696 SM00354 helix_turn _helix lactose operon repressor FORC48_0711 SM00347 helix_turn_helix multiple antibiotic resistance protein FORC48_0714 SM00450 Rhodanese Homology Domain FORC48_0716 SM00450 Rhodanese Homology Domain FORC48_0717 SM00450 Rhodanese Homology Domain FORC48_0717 SM00849 Metallo-beta-lactamase superfamily FORC48_0719 SM00450 Rhodanese Homology Domain FORC48_0720 SM00450 Rhodanese Homology Domain FORC48_0725 SM00829 Enoylreductase FORC48_0736 SM00287 Bacterial SH3 domain homologues FORC48_0738 SM00382 ATPases associated with a variety of cellular activities FORC48_0749 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen FORC48_0770 SM00344 helix_turn_helix ASNC type FORC48_0773 SM00422 helix_turn_helix, mercury resistance FORC48_0786 SM01060 FORC48_0786 FORC48_0792 SM00382 ATPases associated with a variety of cellular activities FORC48_0793 SM00382 ATPases associated with a variety of cellular activities FORC48_0794 SM00062 Bacterial periplasmic substrate-binding proteins FORC48_0794 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. FORC48_0796 SM00382 ATPases associated with a variety of cellular activities FORC48_0811 SM00644 FORC48_0811 FORC48_0812 SM00729 Elongator protein 3, MiaB family, Radical SAM FORC48_0819 SM00047 Lysozyme subfamily 2 FORC48_0826 SM00646 FORC48_0826 FORC48_0834 SM00382 ATPases associated with a variety of cellular activities FORC48_0835 SM00382 ATPases associated with a variety of cellular activities FORC48_0840 SM00849 Metallo-beta-lactamase superfamily FORC48_0844 SM00382 ATPases associated with a variety of cellular activities FORC48_0855 SM00091 PAS domain FORC48_0855 SM00387 Histidine kinase-like ATPases FORC48_0856 SM00448 cheY-homologous receiver domain FORC48_0859 SM00927 DNA mismatch repair enzyme MutH FORC48_0866 SM00470 ParB-like nuclease domain FORC48_0893 SM00347 helix_turn_helix multiple antibiotic resistance protein FORC48_0899 SM01120 FORC48_0899 FORC48_0900 SM00287 Bacterial SH3 domain homologues FORC48_0903 SM00530 Helix-turn-helix XRE-family like proteins FORC48_0908 SM00460 Transglutaminase/protease-like homologues FORC48_0928 SM00331 Sigma factor PP2C-like phosphatases FORC48_0928 SM00448 cheY-homologous receiver domain FORC48_0929 SM00138 Methyltransferase, chemotaxis proteins FORC48_0930 SM00387 Histidine kinase-like ATPases FORC48_0930 SM00388 His Kinase A (phosphoacceptor) domain FORC48_0930 SM00448 cheY-homologous receiver domain FORC48_0938 SM00829 Enoylreductase FORC48_0946 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. FORC48_0953 SM00028 Tetratricopeptide repeats FORC48_0960 SM00835 Cupin FORC48_0961 SM00530 Helix-turn-helix XRE-family like proteins FORC48_0980 SM00347 helix_turn_helix multiple antibiotic resistance protein FORC48_0983 SM00382 ATPases associated with a variety of cellular activities FORC48_1018 SM00354 helix_turn _helix lactose operon repressor FORC48_1020 SM00849 Metallo-beta-lactamase superfamily FORC48_1028 SM00382 ATPases associated with a variety of cellular activities FORC48_1056 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. FORC48_1059 SM00342 helix_turn_helix, arabinose operon control protein FORC48_1059 SM00871 Bacterial transcription activator, effector binding domain FORC48_1062 SM00387 Histidine kinase-like ATPases FORC48_1062 SM00388 His Kinase A (phosphoacceptor) domain FORC48_1063 SM00448 cheY-homologous receiver domain FORC48_1063 SM00862 Transcriptional regulatory protein, C terminal FORC48_1068 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FORC48_1068 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC48_1076 SM00357 Cold shock protein domain FORC48_1101 SM01060 FORC48_1101 FORC48_1103 SM00642 Alpha-amylase domain FORC48_1104 SM00530 Helix-turn-helix XRE-family like proteins FORC48_1106 SM00316 Ribosomal protein S1-like RNA-binding domain FORC48_1115 SM00382 ATPases associated with a variety of cellular activities FORC48_1115 SM01086 C-terminal, D2-small domain, of ClpB protein FORC48_1121 SM00825 Beta-ketoacyl synthase FORC48_1130 SM00382 ATPases associated with a variety of cellular activities FORC48_1131 SM00382 ATPases associated with a variety of cellular activities FORC48_1138 SM00155 Phospholipase D. Active site motifs. FORC48_1144 SM01118 FORC48_1144 FORC48_1146 SM00954 Region found in RelA / SpoT proteins FORC48_1177 SM00635 Bacterial Ig-like domain 2 FORC48_1193 SM01324 FORC48_1193 FORC48_1201 SM00861 Transketolase, pyrimidine binding domain FORC48_1203 SM00530 Helix-turn-helix XRE-family like proteins FORC48_1219 SM00530 Helix-turn-helix XRE-family like proteins FORC48_1223 SM00382 ATPases associated with a variety of cellular activities FORC48_1227 SM00014 Acid phosphatase homologues FORC48_1237 SM00448 cheY-homologous receiver domain FORC48_1237 SM00862 Transcriptional regulatory protein, C terminal FORC48_1238 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC48_1238 SM00387 Histidine kinase-like ATPases FORC48_1238 SM00388 His Kinase A (phosphoacceptor) domain FORC48_1239 SM00345 helix_turn_helix gluconate operon transcriptional repressor FORC48_1239 SM00895 FORC48_1239 FORC48_1254 SM00822 FORC48_1254 FORC48_1261 SM00382 ATPases associated with a variety of cellular activities FORC48_1266 SM00420 helix_turn_helix, Deoxyribose operon repressor FORC48_1266 SM01134 FORC48_1266 FORC48_1268 SM00365 Leucine-rich repeat, SDS22-like subfamily FORC48_1268 SM00369 Leucine-rich repeats, typical (most populated) subfamily FORC48_1268 SM00725 NEAr Transporter domain FORC48_1269 SM01007 Class II Aldolase and Adducin N-terminal domain FORC48_1273 SM00387 Histidine kinase-like ATPases FORC48_1273 SM00388 His Kinase A (phosphoacceptor) domain FORC48_1274 SM00347 helix_turn_helix multiple antibiotic resistance protein FORC48_1279 SM00387 Histidine kinase-like ATPases FORC48_1279 SM00388 His Kinase A (phosphoacceptor) domain FORC48_1293 SM00345 helix_turn_helix gluconate operon transcriptional repressor FORC48_1294 SM00382 ATPases associated with a variety of cellular activities FORC48_1296 SM00382 ATPases associated with a variety of cellular activities FORC48_1300 SM00344 helix_turn_helix ASNC type FORC48_1325 SM00347 helix_turn_helix multiple antibiotic resistance protein FORC48_1340 SM01329 FORC48_1340 FORC48_1377 SM00387 Histidine kinase-like ATPases FORC48_1378 SM00421 helix_turn_helix, Lux Regulon FORC48_1378 SM00448 cheY-homologous receiver domain FORC48_1397 SM00387 Histidine kinase-like ATPases FORC48_1397 SM00388 His Kinase A (phosphoacceptor) domain FORC48_1402 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC48_1402 SM00387 Histidine kinase-like ATPases FORC48_1402 SM00388 His Kinase A (phosphoacceptor) domain FORC48_1412 SM00363 S4 RNA-binding domain FORC48_1416 SM00448 cheY-homologous receiver domain FORC48_1416 SM00862 Transcriptional regulatory protein, C terminal FORC48_1417 SM00091 PAS domain FORC48_1417 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC48_1417 SM00387 Histidine kinase-like ATPases FORC48_1417 SM00388 His Kinase A (phosphoacceptor) domain FORC48_1419 SM00257 Lysin motif FORC48_1424 SM00487 DEAD-like helicases superfamily FORC48_1424 SM00490 helicase superfamily c-terminal domain FORC48_1426 SM00257 Lysin motif FORC48_1428 SM00422 helix_turn_helix, mercury resistance FORC48_1430 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase FORC48_1433 SM00644 FORC48_1433 FORC48_1435 SM00870 FORC48_1435 FORC48_1438 SM00316 Ribosomal protein S1-like RNA-binding domain FORC48_1439 SM01240 FORC48_1439 FORC48_1451 SM00411 bacterial (prokaryotic) histone like domain FORC48_1456 SM00562 FORC48_1456 FORC48_1460 SM00028 Tetratricopeptide repeats FORC48_1461 SM00914 FORC48_1461 FORC48_1470 SM00986 Uracil DNA glycosylase superfamily FORC48_1470 SM00987 UreE urease accessory protein, C-terminal domain FORC48_1474 SM00851 MGS-like domain FORC48_1483 SM00479 FORC48_1483 FORC48_1483 SM00487 DEAD-like helicases superfamily FORC48_1483 SM00491 FORC48_1483 FORC48_1488 SM00478 endonuclease III FORC48_1490 SM00060 Fibronectin type 3 domain FORC48_1501 SM00981 FORC48_1501 FORC48_1505 SM00028 Tetratricopeptide repeats FORC48_1510 SM00491 FORC48_1510 FORC48_1522 SM00450 Rhodanese Homology Domain FORC48_1528 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs FORC48_1528 SM00475 5'-3' exonuclease FORC48_1550 SM00357 Cold shock protein domain FORC48_1560 SM00849 Metallo-beta-lactamase superfamily FORC48_1561 SM00422 helix_turn_helix, mercury resistance FORC48_1561 SM00871 Bacterial transcription activator, effector binding domain FORC48_1575 SM00448 cheY-homologous receiver domain FORC48_1576 SM00073 Histidine Phosphotransfer domain FORC48_1576 SM00260 Two component signalling adaptor domain FORC48_1576 SM00387 Histidine kinase-like ATPases FORC48_1576 SM01231 FORC48_1576 FORC48_1580 SM00138 Methyltransferase, chemotaxis proteins FORC48_1595 SM00382 ATPases associated with a variety of cellular activities FORC48_1602 SM00260 Two component signalling adaptor domain FORC48_1602 SM00448 cheY-homologous receiver domain FORC48_1616 SM00382 ATPases associated with a variety of cellular activities FORC48_1616 SM00962 SRP54-type protein, GTPase domain FORC48_1618 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain FORC48_1626 SM00530 Helix-turn-helix XRE-family like proteins FORC48_1630 SM00382 ATPases associated with a variety of cellular activities FORC48_1633 SM00849 Metallo-beta-lactamase superfamily FORC48_1633 SM01027 Beta-Casp domain FORC48_1639 SM00855 Phosphoglycerate mutase family FORC48_1643 SM00347 helix_turn_helix multiple antibiotic resistance protein FORC48_1651 SM00345 helix_turn_helix gluconate operon transcriptional repressor FORC48_1651 SM00895 FORC48_1651 FORC48_1654 SM00833 Cobalamin synthesis protein cobW C-terminal domain FORC48_1659 SM00422 helix_turn_helix, mercury resistance FORC48_1673 SM00530 Helix-turn-helix XRE-family like proteins FORC48_1680 SM00421 helix_turn_helix, Lux Regulon FORC48_1680 SM00448 cheY-homologous receiver domain FORC48_1682 SM00382 ATPases associated with a variety of cellular activities FORC48_1686 SM00155 Phospholipase D. Active site motifs. FORC48_1691 SM00919 Malic enzyme, NAD binding domain FORC48_1691 SM01274 FORC48_1691 FORC48_1692 SM00387 Histidine kinase-like ATPases FORC48_1693 SM00448 cheY-homologous receiver domain FORC48_1695 SM00487 DEAD-like helicases superfamily FORC48_1695 SM00490 helicase superfamily c-terminal domain FORC48_1699 SM00530 Helix-turn-helix XRE-family like proteins FORC48_1738 SM00854 Bacterial capsule synthesis protein PGA_cap FORC48_1744 SM00850 LytTr DNA-binding domain FORC48_1751 SM00448 cheY-homologous receiver domain FORC48_1751 SM00862 Transcriptional regulatory protein, C terminal FORC48_1752 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC48_1752 SM00387 Histidine kinase-like ATPases FORC48_1752 SM00388 His Kinase A (phosphoacceptor) domain FORC48_1755 SM00450 Rhodanese Homology Domain FORC48_1764 SM01276 FORC48_1764 FORC48_1774 SM01133 FORC48_1774 FORC48_1776 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain FORC48_1785 SM01011 Aminopeptidase P, N-terminal domain FORC48_1788 SM00287 Bacterial SH3 domain homologues FORC48_1795 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. FORC48_1801 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain FORC48_1801 SM00437 Bacterial DNA topoisomerase I DNA-binding domain FORC48_1801 SM00493 FORC48_1801 FORC48_1840 SM00833 Cobalamin synthesis protein cobW C-terminal domain FORC48_1842 SM00382 ATPases associated with a variety of cellular activities FORC48_1843 SM00382 ATPases associated with a variety of cellular activities FORC48_1850 SM00347 helix_turn_helix multiple antibiotic resistance protein FORC48_1855 SM00382 ATPases associated with a variety of cellular activities FORC48_1856 SM00382 ATPases associated with a variety of cellular activities FORC48_1869 SM00287 Bacterial SH3 domain homologues FORC48_1871 SM00382 ATPases associated with a variety of cellular activities FORC48_1872 SM00448 cheY-homologous receiver domain FORC48_1872 SM00862 Transcriptional regulatory protein, C terminal FORC48_1873 SM00387 Histidine kinase-like ATPases FORC48_1873 SM00388 His Kinase A (phosphoacceptor) domain FORC48_1887 SM00448 cheY-homologous receiver domain FORC48_1887 SM00862 Transcriptional regulatory protein, C terminal FORC48_1888 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC48_1888 SM00387 Histidine kinase-like ATPases FORC48_1888 SM00388 His Kinase A (phosphoacceptor) domain FORC48_1902 SM00345 helix_turn_helix gluconate operon transcriptional repressor FORC48_1907 SM00460 Transglutaminase/protease-like homologues FORC48_1912 SM00966 SpoVT / AbrB like domain FORC48_1914 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor FORC48_1924 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FORC48_1924 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC48_1936 SM00833 Cobalamin synthesis protein cobW C-terminal domain FORC48_1947 SM00855 Phosphoglycerate mutase family FORC48_1959 SM00155 Phospholipase D. Active site motifs. FORC48_1964 SM01091 Transporter associated domain FORC48_1979 SM00244 prohibitin homologues FORC48_1981 SM00855 Phosphoglycerate mutase family FORC48_1985 SM01005 Alanine racemase, C-terminal domain FORC48_1990 SM00345 helix_turn_helix gluconate operon transcriptional repressor FORC48_2027 SM00487 DEAD-like helicases superfamily FORC48_2027 SM00490 helicase superfamily c-terminal domain FORC48_2031 SM00829 Enoylreductase FORC48_2035 SM00849 Metallo-beta-lactamase superfamily FORC48_2038 SM00460 Transglutaminase/protease-like homologues FORC48_2041 SM00926 Molybdopterin oxidoreductase Fe4S4 domain FORC48_2045 SM00100 Cyclic nucleotide-monophosphate binding domain FORC48_2045 SM00419 helix_turn_helix, cAMP Regulatory protein FORC48_2046 SM00729 Elongator protein 3, MiaB family, Radical SAM FORC48_2048 SM00852 Probable molybdopterin binding domain FORC48_2060 SM00894 Excalibur calcium-binding domain FORC48_2080 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. FORC48_2081 SM00382 ATPases associated with a variety of cellular activities FORC48_2088 SM00567 E-Z type HEAT repeats FORC48_2088 SM00932 Scaffold protein Nfu/NifU N terminal FORC48_2092 SM00836 DALR anticodon binding domain FORC48_2092 SM01016 Arginyl tRNA synthetase N terminal dom FORC48_2095 SM00028 Tetratricopeptide repeats FORC48_2113 SM00530 Helix-turn-helix XRE-family like proteins FORC48_2116 SM00382 ATPases associated with a variety of cellular activities FORC48_2127 SM00563 Phosphate acyltransferases FORC48_2140 SM00646 FORC48_2140 FORC48_2149 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. FORC48_2150 SM00421 helix_turn_helix, Lux Regulon FORC48_2150 SM00448 cheY-homologous receiver domain FORC48_2153 SM00829 Enoylreductase FORC48_2160 SM01350 FORC48_2160 FORC48_2167 SM00382 ATPases associated with a variety of cellular activities FORC48_2175 SM01091 Transporter associated domain FORC48_2178 SM00387 Histidine kinase-like ATPases FORC48_2178 SM00388 His Kinase A (phosphoacceptor) domain FORC48_2181 SM00882 Coenzyme A transferase FORC48_2182 SM00882 Coenzyme A transferase FORC48_2185 SM00382 ATPases associated with a variety of cellular activities FORC48_2193 SM00219 Tyrosine kinase, catalytic domain FORC48_2195 SM00014 Acid phosphatase homologues FORC48_2233 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor FORC48_2243 SM00823 Phosphopantetheine attachment site FORC48_2243 SM00824 Thioesterase FORC48_2244 SM00923 MbtH-like protein FORC48_2248 SM00411 bacterial (prokaryotic) histone like domain FORC48_2258 SM00363 S4 RNA-binding domain FORC48_2259 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain FORC48_2260 SM00382 ATPases associated with a variety of cellular activities FORC48_2267 SM00849 Metallo-beta-lactamase superfamily FORC48_2268 SM00860 SMI1 / KNR4 family FORC48_2273 SM00100 Cyclic nucleotide-monophosphate binding domain FORC48_2277 SM00849 Metallo-beta-lactamase superfamily FORC48_2281 SM01059 Chloramphenicol acetyltransferase FORC48_2285 SM00530 Helix-turn-helix XRE-family like proteins FORC48_2292 SM00357 Cold shock protein domain FORC48_2297 SM00859 Semialdehyde dehydrogenase, NAD binding domain FORC48_2305 SM00382 ATPases associated with a variety of cellular activities FORC48_2306 SM00382 ATPases associated with a variety of cellular activities FORC48_2313 SM00530 Helix-turn-helix XRE-family like proteins FORC48_2317 SM00835 Cupin FORC48_2331 SM01207 FORC48_2331 FORC48_2334 SM00347 helix_turn_helix multiple antibiotic resistance protein FORC48_2338 SM00849 Metallo-beta-lactamase superfamily FORC48_2340 SM00487 DEAD-like helicases superfamily FORC48_2340 SM00490 helicase superfamily c-terminal domain FORC48_2353 SM00347 helix_turn_helix multiple antibiotic resistance protein FORC48_2354 SM00855 Phosphoglycerate mutase family FORC48_2363 SM00421 helix_turn_helix, Lux Regulon FORC48_2364 SM00530 Helix-turn-helix XRE-family like proteins FORC48_2365 SM00966 SpoVT / AbrB like domain FORC48_2369 SM00936 Penicillin-binding protein 5, C-terminal domain FORC48_2373 SM00823 Phosphopantetheine attachment site FORC48_2374 SM00823 Phosphopantetheine attachment site FORC48_2387 SM00047 Lysozyme subfamily 2 FORC48_2395 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins FORC48_2405 SM00382 ATPases associated with a variety of cellular activities FORC48_2411 SM00878 Biotin carboxylase C-terminal domain FORC48_2427 SM00387 Histidine kinase-like ATPases FORC48_2427 SM00388 His Kinase A (phosphoacceptor) domain FORC48_2428 SM00448 cheY-homologous receiver domain FORC48_2428 SM00862 Transcriptional regulatory protein, C terminal FORC48_2435 SM00342 helix_turn_helix, arabinose operon control protein FORC48_2441 SM00382 ATPases associated with a variety of cellular activities FORC48_2442 SM00422 helix_turn_helix, mercury resistance FORC48_2442 SM00871 Bacterial transcription activator, effector binding domain FORC48_2453 SM00345 helix_turn_helix gluconate operon transcriptional repressor FORC48_2468 SM00448 cheY-homologous receiver domain FORC48_2468 SM00862 Transcriptional regulatory protein, C terminal FORC48_2469 SM00387 Histidine kinase-like ATPases FORC48_2471 SM00382 ATPases associated with a variety of cellular activities FORC48_2474 SM00347 helix_turn_helix multiple antibiotic resistance protein FORC48_2477 SM00382 ATPases associated with a variety of cellular activities FORC48_2483 SM00345 helix_turn_helix gluconate operon transcriptional repressor FORC48_2484 SM01209 FORC48_2484 FORC48_2495 SM00530 Helix-turn-helix XRE-family like proteins FORC48_2496 SM00530 Helix-turn-helix XRE-family like proteins FORC48_2544 SM00564 beta-propeller repeat FORC48_2564 SM00091 PAS domain FORC48_2564 SM00387 Histidine kinase-like ATPases FORC48_2564 SM00388 His Kinase A (phosphoacceptor) domain FORC48_2570 SM00382 ATPases associated with a variety of cellular activities FORC48_2573 SM00387 Histidine kinase-like ATPases FORC48_2573 SM00388 His Kinase A (phosphoacceptor) domain FORC48_2584 SM00829 Enoylreductase FORC48_2585 SM00014 Acid phosphatase homologues FORC48_2586 SM00740 FORC48_2586 FORC48_2594 SM00530 Helix-turn-helix XRE-family like proteins FORC48_2597 SM00422 helix_turn_helix, mercury resistance FORC48_2599 SM00422 helix_turn_helix, mercury resistance FORC48_2599 SM00871 Bacterial transcription activator, effector binding domain FORC48_2605 SM00287 Bacterial SH3 domain homologues FORC48_2608 SM00345 helix_turn_helix gluconate operon transcriptional repressor FORC48_2621 SM00480 DNA polymerase III beta subunit FORC48_2638 SM00465 GIY-YIG type nucleases (URI domain) FORC48_2654 SM00448 cheY-homologous receiver domain FORC48_2654 SM00862 Transcriptional regulatory protein, C terminal FORC48_2655 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC48_2655 SM00387 Histidine kinase-like ATPases FORC48_2655 SM00388 His Kinase A (phosphoacceptor) domain FORC48_2658 SM00382 ATPases associated with a variety of cellular activities FORC48_2665 SM00642 Alpha-amylase domain FORC48_2671 SM00871 Bacterial transcription activator, effector binding domain FORC48_2674 SM00345 helix_turn_helix gluconate operon transcriptional repressor FORC48_2675 SM00829 Enoylreductase FORC48_2698 SM00382 ATPases associated with a variety of cellular activities FORC48_2702 SM00420 helix_turn_helix, Deoxyribose operon repressor FORC48_2702 SM01134 FORC48_2702 FORC48_2710 SM00861 Transketolase, pyrimidine binding domain FORC48_2723 SM00116 Domain in cystathionine beta-synthase and other proteins. FORC48_2723 SM00382 ATPases associated with a variety of cellular activities FORC48_2730 SM00060 Fibronectin type 3 domain FORC48_2730 SM00495 Chitin-binding domain type 3 FORC48_2750 SM00341 Helicase and RNase D C-terminal FORC48_2750 SM00487 DEAD-like helicases superfamily FORC48_2750 SM00490 helicase superfamily c-terminal domain FORC48_2750 SM00956 FORC48_2750 FORC48_2757 SM00646 FORC48_2757 FORC48_2760 SM01131 FORC48_2760 FORC48_2763 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. FORC48_2768 SM01130 FORC48_2768 FORC48_2772 SM00091 PAS domain FORC48_2772 SM00382 ATPases associated with a variety of cellular activities FORC48_2787 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain FORC48_2792 SM00248 ankyrin repeats FORC48_2797 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain FORC48_2799 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC48_2799 SM00387 Histidine kinase-like ATPases FORC48_2799 SM00388 His Kinase A (phosphoacceptor) domain FORC48_2800 SM00448 cheY-homologous receiver domain FORC48_2800 SM00862 Transcriptional regulatory protein, C terminal FORC48_2855 SM00062 Bacterial periplasmic substrate-binding proteins FORC48_2856 SM00382 ATPases associated with a variety of cellular activities FORC48_2861 SM00028 Tetratricopeptide repeats FORC48_2878 SM00382 ATPases associated with a variety of cellular activities FORC48_2887 SM00830 Chorismate mutase type II FORC48_2895 SM00287 Bacterial SH3 domain homologues FORC48_2906 SM00382 ATPases associated with a variety of cellular activities FORC48_2911 SM01133 FORC48_2911 FORC48_2916 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor FORC48_2920 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase FORC48_2923 SM00346 helix_turn_helix isocitrate lyase regulation FORC48_2929 SM00098 Alkaline phosphatase homologues FORC48_2931 SM00530 Helix-turn-helix XRE-family like proteins FORC48_2953 SM01060 FORC48_2953 FORC48_2961 SM00382 ATPases associated with a variety of cellular activities FORC48_2972 SM00347 helix_turn_helix multiple antibiotic resistance protein FORC48_2973 SM00889 Elongation factor G, domain IV FORC48_2976 SM00773 Proposed nucleic acid binding domain FORC48_2980 SM00342 helix_turn_helix, arabinose operon control protein FORC48_2980 SM00871 Bacterial transcription activator, effector binding domain FORC48_2985 SM00345 helix_turn_helix gluconate operon transcriptional repressor FORC48_3013 SM00797 Allophanate hydrolase subunit 2 FORC48_3014 SM00796 Allophanate hydrolase subunit 1 FORC48_3015 SM00346 helix_turn_helix isocitrate lyase regulation FORC48_3018 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor FORC48_3036 SM00849 Metallo-beta-lactamase superfamily FORC48_3042 SM00870 FORC48_3042 FORC48_3043 SM00530 Helix-turn-helix XRE-family like proteins FORC48_3048 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) FORC48_3048 SM00091 PAS domain FORC48_3048 SM00387 Histidine kinase-like ATPases FORC48_3048 SM00388 His Kinase A (phosphoacceptor) domain FORC48_3053 SM00342 helix_turn_helix, arabinose operon control protein FORC48_3055 SM00465 GIY-YIG type nucleases (URI domain) FORC48_3059 SM00919 Malic enzyme, NAD binding domain FORC48_3059 SM01274 FORC48_3059 FORC48_3065 SM00448 cheY-homologous receiver domain FORC48_3066 SM00387 Histidine kinase-like ATPases FORC48_3081 SM00347 helix_turn_helix multiple antibiotic resistance protein FORC48_3111 SM00226 Low molecular weight phosphatase family FORC48_3126 SM00448 cheY-homologous receiver domain FORC48_3126 SM00862 Transcriptional regulatory protein, C terminal FORC48_3127 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC48_3127 SM00387 Histidine kinase-like ATPases FORC48_3127 SM00388 His Kinase A (phosphoacceptor) domain FORC48_3134 SM00421 helix_turn_helix, Lux Regulon FORC48_3134 SM00448 cheY-homologous receiver domain FORC48_3137 SM00382 ATPases associated with a variety of cellular activities FORC48_3138 SM00387 Histidine kinase-like ATPases FORC48_3138 SM00388 His Kinase A (phosphoacceptor) domain FORC48_3139 SM00448 cheY-homologous receiver domain FORC48_3139 SM00862 Transcriptional regulatory protein, C terminal FORC48_3156 SM00382 ATPases associated with a variety of cellular activities FORC48_3158 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor FORC48_3161 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC48_3161 SM00387 Histidine kinase-like ATPases FORC48_3161 SM00388 His Kinase A (phosphoacceptor) domain FORC48_3162 SM00448 cheY-homologous receiver domain FORC48_3162 SM00862 Transcriptional regulatory protein, C terminal FORC48_3164 SM00347 helix_turn_helix multiple antibiotic resistance protein FORC48_3181 SM00644 FORC48_3181 FORC48_3195 SM00857 Resolvase, N terminal domain FORC48_3200 SM00857 Resolvase, N terminal domain FORC48_3201 SM00860 SMI1 / KNR4 family FORC48_3208 SM00854 Bacterial capsule synthesis protein PGA_cap FORC48_3213 SM00347 helix_turn_helix multiple antibiotic resistance protein FORC48_3225 SM00382 ATPases associated with a variety of cellular activities FORC48_3248 SM00382 ATPases associated with a variety of cellular activities FORC48_3251 SM00530 Helix-turn-helix XRE-family like proteins FORC48_3270 SM00028 Tetratricopeptide repeats FORC48_3275 SM01091 Transporter associated domain FORC48_3276 SM00422 helix_turn_helix, mercury resistance FORC48_3292 SM01350 FORC48_3292 FORC48_3293 SM00861 Transketolase, pyrimidine binding domain FORC48_3297 SM00829 Enoylreductase FORC48_3304 SM00914 FORC48_3304 FORC48_3308 SM00345 helix_turn_helix gluconate operon transcriptional repressor FORC48_3308 SM00866 FORC48_3308 FORC48_3313 SM00849 Metallo-beta-lactamase superfamily FORC48_3327 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor FORC48_3328 SM00636 FORC48_3328 FORC48_3336 SM00871 Bacterial transcription activator, effector binding domain FORC48_3337 SM00420 helix_turn_helix, Deoxyribose operon repressor FORC48_3339 SM00382 ATPases associated with a variety of cellular activities FORC48_3345 SM00849 Metallo-beta-lactamase superfamily FORC48_3346 SM00641 Glycosyl hydrolases family 25 FORC48_3359 SM00849 Metallo-beta-lactamase superfamily FORC48_3385 SM00829 Enoylreductase FORC48_3388 SM00855 Phosphoglycerate mutase family FORC48_3390 SM00533 DNA-binding domain of DNA mismatch repair MUTS family FORC48_3390 SM00534 ATPase domain of DNA mismatch repair MUTS family FORC48_3391 SM00642 Alpha-amylase domain FORC48_3395 SM00422 helix_turn_helix, mercury resistance FORC48_3395 SM00871 Bacterial transcription activator, effector binding domain FORC48_3407 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor FORC48_3408 SM00829 Enoylreductase FORC48_3411 SM00028 Tetratricopeptide repeats FORC48_3422 SM00450 Rhodanese Homology Domain FORC48_3422 SM00849 Metallo-beta-lactamase superfamily FORC48_3426 SM00148 Phospholipase C, catalytic domain (part); domain X FORC48_3427 SM00060 Fibronectin type 3 domain FORC48_3438 SM00028 Tetratricopeptide repeats FORC48_3440 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FORC48_3440 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC48_3440 SM00319 Homologues of the ligand binding domain of Tar FORC48_3448 SM00060 Fibronectin type 3 domain FORC48_3448 SM00495 Chitin-binding domain type 3 FORC48_3448 SM01276 FORC48_3448 FORC48_3451 SM00052 Putative diguanylate phosphodiesterase FORC48_3451 SM00091 PAS domain FORC48_3451 SM00267 diguanylate cyclase FORC48_3452 SM00382 ATPases associated with a variety of cellular activities FORC48_3459 SM00387 Histidine kinase-like ATPases FORC48_3459 SM00388 His Kinase A (phosphoacceptor) domain FORC48_3460 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins FORC48_3470 SM00479 FORC48_3470 FORC48_3471 SM00357 Cold shock protein domain FORC48_3476 SM01022 FORC48_3476 FORC48_3487 SM00822 FORC48_3487 FORC48_3498 SM00852 Probable molybdopterin binding domain FORC48_3501 SM00729 Elongator protein 3, MiaB family, Radical SAM FORC48_3505 SM00926 Molybdopterin oxidoreductase Fe4S4 domain FORC48_3505 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region FORC48_3526 SM00382 ATPases associated with a variety of cellular activities FORC48_3529 SM00434 DNA Topoisomerase IV FORC48_3530 SM00387 Histidine kinase-like ATPases FORC48_3530 SM00433 TopoisomeraseII FORC48_3531 SM00881 CoA binding domain FORC48_3532 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. FORC48_3533 SM00448 cheY-homologous receiver domain FORC48_3533 SM00862 Transcriptional regulatory protein, C terminal FORC48_3536 SM01207 FORC48_3536 FORC48_3539 SM00257 Lysin motif FORC48_3539 SM00636 FORC48_3539 FORC48_3543 SM00479 FORC48_3543 FORC48_3547 SM00382 ATPases associated with a variety of cellular activities FORC48_3557 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain FORC48_3570 SM00644 FORC48_3570 FORC48_3570 SM00701 Animal peptidoglycan recognition proteins homologous to Bacteriophage T3 lysozyme. FORC48_3571 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain FORC48_3575 SM00091 PAS domain FORC48_3575 SM00387 Histidine kinase-like ATPases FORC48_3575 SM00388 His Kinase A (phosphoacceptor) domain FORC48_3582 SM01058 CarD-like/TRCF domain FORC48_3600 SM00382 ATPases associated with a variety of cellular activities FORC48_3612 SM00287 Bacterial SH3 domain homologues FORC48_3612 SM00641 Glycosyl hydrolases family 25 FORC48_3613 SM00382 ATPases associated with a variety of cellular activities FORC48_3614 SM00382 ATPases associated with a variety of cellular activities FORC48_3617 SM00861 Transketolase, pyrimidine binding domain FORC48_3621 SM00382 ATPases associated with a variety of cellular activities FORC48_3622 SM00062 Bacterial periplasmic substrate-binding proteins FORC48_3625 SM00857 Resolvase, N terminal domain FORC48_3639 SM00530 Helix-turn-helix XRE-family like proteins FORC48_3652 SM00287 Bacterial SH3 domain homologues FORC48_3652 SM00644 FORC48_3652 FORC48_3699 SM00382 ATPases associated with a variety of cellular activities FORC48_3709 SM00530 Helix-turn-helix XRE-family like proteins FORC48_3710 SM00530 Helix-turn-helix XRE-family like proteins FORC48_3714 SM01230 FORC48_3714 FORC48_3715 SM00422 helix_turn_helix, mercury resistance FORC48_3720 SM00382 ATPases associated with a variety of cellular activities FORC48_3726 SM00287 Bacterial SH3 domain homologues FORC48_3729 SM00420 helix_turn_helix, Deoxyribose operon repressor FORC48_3729 SM01134 FORC48_3729 FORC48_3735 SM00636 FORC48_3735 FORC48_3738 SM00411 bacterial (prokaryotic) histone like domain FORC48_3745 SM00382 ATPases associated with a variety of cellular activities FORC48_3750 SM00342 helix_turn_helix, arabinose operon control protein FORC48_3752 SM00478 endonuclease III FORC48_3758 SM00052 Putative diguanylate phosphodiesterase FORC48_3758 SM00091 PAS domain FORC48_3758 SM00267 diguanylate cyclase FORC48_3768 SM00345 helix_turn_helix gluconate operon transcriptional repressor FORC48_3771 SM00345 helix_turn_helix gluconate operon transcriptional repressor FORC48_3771 SM00866 FORC48_3771 FORC48_3774 SM00148 Phospholipase C, catalytic domain (part); domain X FORC48_3776 SM00257 Lysin motif FORC48_3781 SM00853 MutL C terminal dimerisation domain FORC48_3781 SM01340 FORC48_3781 FORC48_3782 SM00533 DNA-binding domain of DNA mismatch repair MUTS family FORC48_3782 SM00534 ATPase domain of DNA mismatch repair MUTS family FORC48_3785 SM00729 Elongator protein 3, MiaB family, Radical SAM FORC48_3791 SM00322 K homology RNA-binding domain FORC48_3791 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. FORC48_3792 SM00382 ATPases associated with a variety of cellular activities FORC48_3793 SM00852 Probable molybdopterin binding domain FORC48_3803 SM00382 ATPases associated with a variety of cellular activities FORC48_3805 SM00345 helix_turn_helix gluconate operon transcriptional repressor FORC48_3805 SM00866 FORC48_3805 FORC48_3806 SM00382 ATPases associated with a variety of cellular activities FORC48_3806 SM00843 FORC48_3806 FORC48_3809 SM00849 Metallo-beta-lactamase superfamily FORC48_3810 SM01130 FORC48_3810 FORC48_3812 SM00859 Semialdehyde dehydrogenase, NAD binding domain FORC48_3818 SM00316 Ribosomal protein S1-like RNA-binding domain FORC48_3818 SM00322 K homology RNA-binding domain FORC48_3819 SM01387 FORC48_3819 FORC48_3820 SM00904 Riboflavin kinase FORC48_3827 SM00316 Ribosomal protein S1-like RNA-binding domain FORC48_3827 SM00322 K homology RNA-binding domain FORC48_3829 SM00479 FORC48_3829 FORC48_3829 SM00481 DNA polymerase alpha chain like domain FORC48_3831 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. FORC48_3841 SM00382 ATPases associated with a variety of cellular activities FORC48_3841 SM01086 C-terminal, D2-small domain, of ClpB protein FORC48_3845 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain FORC48_3845 SM00437 Bacterial DNA topoisomerase I DNA-binding domain FORC48_3845 SM00493 FORC48_3845 FORC48_3847 SM00881 CoA binding domain FORC48_3857 SM00382 ATPases associated with a variety of cellular activities FORC48_3857 SM00962 SRP54-type protein, GTPase domain FORC48_3857 SM00963 SRP54-type protein, helical bundle domain FORC48_3859 SM00382 ATPases associated with a variety of cellular activities FORC48_3859 SM00962 SRP54-type protein, GTPase domain FORC48_3859 SM00963 SRP54-type protein, helical bundle domain FORC48_3860 SM00968 SMC proteins Flexible Hinge Domain FORC48_3861 SM00358 Double-stranded RNA binding motif FORC48_3861 SM00535 Ribonuclease III family FORC48_3863 SM00822 FORC48_3863 FORC48_3864 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. FORC48_3867 SM00487 DEAD-like helicases superfamily FORC48_3867 SM00490 helicase superfamily c-terminal domain FORC48_3868 SM01120 FORC48_3868 FORC48_3868 SM01121 FORC48_3868 FORC48_3872 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain FORC48_3875 SM00220 Serine/Threonine protein kinases, catalytic domain FORC48_3875 SM00740 FORC48_3875 FORC48_3876 SM00331 Sigma factor PP2C-like phosphatases FORC48_3876 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain FORC48_3881 SM00487 DEAD-like helicases superfamily FORC48_3881 SM00490 helicase superfamily c-terminal domain FORC48_3883 SM01409 FORC48_3883 FORC48_3884 SM00072 Guanylate kinase homologues. FORC48_3887 SM00831 Cation transporter/ATPase, N-terminus FORC48_3895 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family FORC48_3898 SM00851 MGS-like domain FORC48_3898 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain FORC48_3898 SM01209 FORC48_3898 FORC48_3899 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain FORC48_3904 SM00363 S4 RNA-binding domain FORC48_3909 SM00363 S4 RNA-binding domain FORC48_3918 SM00864 Tubulin/FtsZ family, GTPase domain FORC48_3918 SM00865 Tubulin/FtsZ family, C-terminal domain FORC48_3919 SM00842 Cell division protein FtsA FORC48_3929 SM00740 FORC48_3929 FORC48_3930 SM00740 FORC48_3930 FORC48_3936 SM00717 SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains FORC48_3940 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. FORC48_3948 SM00855 Phosphoglycerate mutase family FORC48_3962 SM00878 Biotin carboxylase C-terminal domain FORC48_3966 SM00670 Large family of predicted nucleotide-binding domains FORC48_3971 SM00838 Elongation factor G C-terminus FORC48_3987 SM00861 Transketolase, pyrimidine binding domain FORC48_3993 SM00849 Metallo-beta-lactamase superfamily FORC48_4007 SM00052 Putative diguanylate phosphodiesterase FORC48_4024 SM00387 Histidine kinase-like ATPases FORC48_4024 SM00388 His Kinase A (phosphoacceptor) domain FORC48_4028 SM00354 helix_turn _helix lactose operon repressor FORC48_4032 SM00642 Alpha-amylase domain FORC48_4033 SM00642 Alpha-amylase domain FORC48_4034 SM00382 ATPases associated with a variety of cellular activities FORC48_4041 SM00382 ATPases associated with a variety of cellular activities FORC48_4058 SM01007 Class II Aldolase and Adducin N-terminal domain FORC48_4064 SM00267 diguanylate cyclase FORC48_4071 SM01061 CAT RNA binding domain FORC48_4073 SM00866 FORC48_4073 FORC48_4076 SM00849 Metallo-beta-lactamase superfamily FORC48_4095 SM00387 Histidine kinase-like ATPases FORC48_4097 SM00936 Penicillin-binding protein 5, C-terminal domain FORC48_4098 SM00345 helix_turn_helix gluconate operon transcriptional repressor FORC48_4099 SM00382 ATPases associated with a variety of cellular activities FORC48_4103 SM00347 helix_turn_helix multiple antibiotic resistance protein FORC48_4107 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain FORC48_4126 SM00354 helix_turn _helix lactose operon repressor FORC48_4130 SM00704 CDGSH-type zinc finger. Function unknown. FORC48_4136 SM00729 Elongator protein 3, MiaB family, Radical SAM FORC48_4136 SM00876 Biotin and Thiamin Synthesis associated domain FORC48_4146 SM00347 helix_turn_helix multiple antibiotic resistance protein FORC48_4153 SM00859 Semialdehyde dehydrogenase, NAD binding domain FORC48_4156 SM00849 Metallo-beta-lactamase superfamily FORC48_4161 SM00849 Metallo-beta-lactamase superfamily FORC48_4164 SM00831 Cation transporter/ATPase, N-terminus FORC48_4173 SM00382 ATPases associated with a variety of cellular activities FORC48_4175 SM00062 Bacterial periplasmic substrate-binding proteins FORC48_4175 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. FORC48_4182 SM00861 Transketolase, pyrimidine binding domain FORC48_4186 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase FORC48_4188 SM00091 PAS domain FORC48_4188 SM00382 ATPases associated with a variety of cellular activities FORC48_4193 SM00448 cheY-homologous receiver domain FORC48_4194 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. FORC48_4197 SM00363 S4 RNA-binding domain FORC48_4198 SM00861 Transketolase, pyrimidine binding domain FORC48_4205 SM00878 Biotin carboxylase C-terminal domain FORC48_4215 SM00382 ATPases associated with a variety of cellular activities FORC48_4219 SM00841 Elongation factor P, C-terminal FORC48_4219 SM01185 FORC48_4219 FORC48_4226 SM00529 Helix-turn-helix diphteria tox regulatory element FORC48_4232 SM00450 Rhodanese Homology Domain FORC48_4234 SM00354 helix_turn _helix lactose operon repressor FORC48_4244 SM00382 ATPases associated with a variety of cellular activities FORC48_4245 SM00345 helix_turn_helix gluconate operon transcriptional repressor FORC48_4252 SM00487 DEAD-like helicases superfamily FORC48_4252 SM00490 helicase superfamily c-terminal domain FORC48_4260 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. FORC48_4267 SM00382 ATPases associated with a variety of cellular activities FORC48_4278 SM01018 B12 binding domain FORC48_4285 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor FORC48_4287 SM00849 Metallo-beta-lactamase superfamily FORC48_4295 SM00382 ATPases associated with a variety of cellular activities FORC48_4308 SM00382 ATPases associated with a variety of cellular activities FORC48_4311 SM00518 AP endonuclease family 2 FORC48_4312 SM00487 DEAD-like helicases superfamily FORC48_4312 SM00490 helicase superfamily c-terminal domain FORC48_4319 SM00400 zinc finger FORC48_4319 SM00493 FORC48_4319 FORC48_4319 SM00766 DNA primase DnaG DnaB-binding FORC48_4323 SM00116 Domain in cystathionine beta-synthase and other proteins. FORC48_4330 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. FORC48_4338 SM00729 Elongator protein 3, MiaB family, Radical SAM FORC48_4341 SM00271 DnaJ molecular chaperone homology domain FORC48_4345 SM00729 Elongator protein 3, MiaB family, Radical SAM FORC48_4347 SM00838 Elongation factor G C-terminus FORC48_4354 SM00849 Metallo-beta-lactamase superfamily FORC48_4356 SM00278 Helix-hairpin-helix DNA-binding motif class 1 FORC48_4360 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. FORC48_4362 SM01103 FORC48_4362 FORC48_4375 SM00954 Region found in RelA / SpoT proteins FORC48_4377 SM00098 Alkaline phosphatase homologues FORC48_4382 SM00855 Phosphoglycerate mutase family FORC48_4392 SM00530 Helix-turn-helix XRE-family like proteins FORC48_4397 SM00382 ATPases associated with a variety of cellular activities FORC48_4417 SM00732 Likely ribonuclease with RNase H fold. FORC48_4419 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain FORC48_4426 SM00028 Tetratricopeptide repeats FORC48_4430 SM00382 ATPases associated with a variety of cellular activities FORC48_4437 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. FORC48_4437 SM00954 Region found in RelA / SpoT proteins FORC48_4446 SM01323 FORC48_4446 FORC48_4450 SM00382 ATPases associated with a variety of cellular activities FORC48_4451 SM00278 Helix-hairpin-helix DNA-binding motif class 1 FORC48_4456 SM00257 Lysin motif FORC48_4466 SM00382 ATPases associated with a variety of cellular activities FORC48_4467 SM00387 Histidine kinase-like ATPases FORC48_4468 SM00448 cheY-homologous receiver domain FORC48_4468 SM00862 Transcriptional regulatory protein, C terminal FORC48_4470 SM01317 FORC48_4470 FORC48_4488 SM00257 Lysin motif FORC48_4490 SM01004 Delta-aminolevulinic acid dehydratase FORC48_4495 SM00347 helix_turn_helix multiple antibiotic resistance protein FORC48_4498 SM00382 ATPases associated with a variety of cellular activities FORC48_4498 SM00464 Found in ATP-dependent protease La (LON) FORC48_4499 SM00382 ATPases associated with a variety of cellular activities FORC48_4500 SM00382 ATPases associated with a variety of cellular activities FORC48_4500 SM00994 ClpX C4-type zinc finger FORC48_4500 SM01086 C-terminal, D2-small domain, of ClpB protein FORC48_4511 SM00909 Sporulation and spore germination FORC48_4518 SM00421 helix_turn_helix, Lux Regulon FORC48_4523 SM00530 Helix-turn-helix XRE-family like proteins FORC48_4528 SM00382 ATPases associated with a variety of cellular activities FORC48_4538 SM00465 GIY-YIG type nucleases (URI domain) FORC48_4540 SM00893 Electron transfer flavoprotein domain FORC48_4541 SM00893 Electron transfer flavoprotein domain FORC48_4556 SM00382 ATPases associated with a variety of cellular activities FORC48_4557 SM00387 Histidine kinase-like ATPases FORC48_4557 SM00388 His Kinase A (phosphoacceptor) domain FORC48_4558 SM00448 cheY-homologous receiver domain FORC48_4558 SM00862 Transcriptional regulatory protein, C terminal FORC48_4561 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase FORC48_4564 SM00382 ATPases associated with a variety of cellular activities FORC48_4567 SM00725 NEAr Transporter domain FORC48_4568 SM00725 NEAr Transporter domain FORC48_4569 SM00725 NEAr Transporter domain FORC48_4572 SM00363 S4 RNA-binding domain FORC48_4574 SM00463 Small MutS-related domain FORC48_4574 SM00533 DNA-binding domain of DNA mismatch repair MUTS family FORC48_4574 SM00534 ATPase domain of DNA mismatch repair MUTS family FORC48_4575 SM00278 Helix-hairpin-helix DNA-binding motif class 1 FORC48_4575 SM00481 DNA polymerase alpha chain like domain FORC48_4575 SM00483 DNA polymerase X family FORC48_4583 SM00873 B3/4 domain FORC48_4583 SM00874 tRNA synthetase B5 domain FORC48_4583 SM00896 Ferredoxin-fold anticodon binding domain FORC48_4585 SM00967 RNA 2'-O ribose methyltransferase substrate binding FORC48_4599 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain FORC48_4602 SM00382 ATPases associated with a variety of cellular activities FORC48_4607 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FORC48_4610 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain FORC48_4610 SM01232 FORC48_4610 FORC48_4611 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs FORC48_4611 SM00474 3'-5' exonuclease FORC48_4611 SM00475 5'-3' exonuclease FORC48_4611 SM00482 DNA polymerase A domain FORC48_4612 SM00091 PAS domain FORC48_4612 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC48_4612 SM00387 Histidine kinase-like ATPases FORC48_4612 SM00388 His Kinase A (phosphoacceptor) domain FORC48_4613 SM00448 cheY-homologous receiver domain FORC48_4613 SM00862 Transcriptional regulatory protein, C terminal FORC48_4618 SM01329 FORC48_4618 FORC48_4627 SM00345 helix_turn_helix gluconate operon transcriptional repressor FORC48_4628 SM00919 Malic enzyme, NAD binding domain FORC48_4628 SM01274 FORC48_4628 FORC48_4629 SM00481 DNA polymerase alpha chain like domain FORC48_4635 SM00116 Domain in cystathionine beta-synthase and other proteins. FORC48_4637 SM00849 Metallo-beta-lactamase superfamily FORC48_4647 SM01002 Alanine dehydrogenase/PNT, C-terminal domain FORC48_4647 SM01003 Alanine dehydrogenase/PNT, N-terminal domain FORC48_4672 SM00981 FORC48_4672 FORC48_4680 SM00363 S4 RNA-binding domain FORC48_4680 SM01390 FORC48_4680 FORC48_4684 SM00860 SMI1 / KNR4 family FORC48_4688 SM00363 S4 RNA-binding domain FORC48_4689 SM01266 FORC48_4689 FORC48_4692 SM00116 Domain in cystathionine beta-synthase and other proteins. FORC48_4696 SM00448 cheY-homologous receiver domain FORC48_4696 SM00862 Transcriptional regulatory protein, C terminal FORC48_4697 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC48_4697 SM00387 Histidine kinase-like ATPases FORC48_4697 SM00388 His Kinase A (phosphoacceptor) domain FORC48_4698 SM00248 ankyrin repeats FORC48_4705 SM00354 helix_turn _helix lactose operon repressor FORC48_4706 SM00830 Chorismate mutase type II FORC48_4716 SM00382 ATPases associated with a variety of cellular activities FORC48_4716 SM00843 FORC48_4716 FORC48_4717 SM00646 FORC48_4717 FORC48_4725 SM00849 Metallo-beta-lactamase superfamily FORC48_4729 SM00642 Alpha-amylase domain FORC48_4732 SM00420 helix_turn_helix, Deoxyribose operon repressor FORC48_4733 SM00363 S4 RNA-binding domain FORC48_4737 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor FORC48_4742 SM01058 CarD-like/TRCF domain FORC48_4749 SM00852 Probable molybdopterin binding domain FORC48_4752 SM00729 Elongator protein 3, MiaB family, Radical SAM FORC48_4756 SM00450 Rhodanese Homology Domain FORC48_4772 SM00382 ATPases associated with a variety of cellular activities FORC48_4776 SM00729 Elongator protein 3, MiaB family, Radical SAM FORC48_4783 SM00014 Acid phosphatase homologues FORC48_4786 SM00852 Probable molybdopterin binding domain FORC48_4799 SM00387 Histidine kinase-like ATPases FORC48_4800 SM00387 Histidine kinase-like ATPases FORC48_4800 SM00388 His Kinase A (phosphoacceptor) domain FORC48_4810 SM00382 ATPases associated with a variety of cellular activities FORC48_4824 SM01234 FORC48_4824 FORC48_4825 SM00947 Carbonic anhydrase FORC48_4839 SM00899 FORC48_4839 FORC48_4841 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC48_4841 SM00387 Histidine kinase-like ATPases FORC48_4841 SM00388 His Kinase A (phosphoacceptor) domain FORC48_4842 SM00448 cheY-homologous receiver domain FORC48_4842 SM00862 Transcriptional regulatory protein, C terminal FORC48_4848 SM00046 Diacylglycerol kinase catalytic domain (presumed) FORC48_4859 SM00382 ATPases associated with a variety of cellular activities FORC48_4860 SM00342 helix_turn_helix, arabinose operon control protein FORC48_4860 SM00871 Bacterial transcription activator, effector binding domain FORC48_4861 SM00422 helix_turn_helix, mercury resistance FORC48_4865 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor FORC48_4866 SM00448 cheY-homologous receiver domain FORC48_4866 SM00862 Transcriptional regulatory protein, C terminal FORC48_4867 SM00387 Histidine kinase-like ATPases FORC48_4870 SM00382 ATPases associated with a variety of cellular activities FORC48_4876 SM00345 helix_turn_helix gluconate operon transcriptional repressor FORC48_4876 SM00866 FORC48_4876 FORC48_4882 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC48_4882 SM00387 Histidine kinase-like ATPases FORC48_4882 SM00388 His Kinase A (phosphoacceptor) domain FORC48_4883 SM00448 cheY-homologous receiver domain FORC48_4883 SM00862 Transcriptional regulatory protein, C terminal FORC48_4884 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain FORC48_4893 SM00357 Cold shock protein domain FORC48_4902 SM00642 Alpha-amylase domain FORC48_4911 SM00316 Ribosomal protein S1-like RNA-binding domain FORC48_4913 SM00344 helix_turn_helix ASNC type FORC48_4920 SM01298 FORC48_4920 FORC48_4921 SM00479 FORC48_4921 FORC48_4945 SM00871 Bacterial transcription activator, effector binding domain FORC48_4958 SM00382 ATPases associated with a variety of cellular activities FORC48_4986 SM00422 helix_turn_helix, mercury resistance FORC48_4991 SM00729 Elongator protein 3, MiaB family, Radical SAM FORC48_5000 SM00382 ATPases associated with a variety of cellular activities FORC48_5004 SM00382 ATPases associated with a variety of cellular activities FORC48_5004 SM00930 FORC48_5004 FORC48_5007 SM00493 FORC48_5007 FORC48_5022 SM00849 Metallo-beta-lactamase superfamily FORC48_5032 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FORC48_5032 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC48_5049 SM00530 Helix-turn-helix XRE-family like proteins FORC48_5053 SM00448 cheY-homologous receiver domain FORC48_5053 SM00862 Transcriptional regulatory protein, C terminal FORC48_5054 SM00387 Histidine kinase-like ATPases FORC48_5054 SM00388 His Kinase A (phosphoacceptor) domain FORC48_5059 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FORC48_5059 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC48_5060 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FORC48_5060 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC48_5064 SM00347 helix_turn_helix multiple antibiotic resistance protein FORC48_5083 SM01276 FORC48_5083 FORC48_5090 SM00363 S4 RNA-binding domain FORC48_5092 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain FORC48_5093 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FORC48_5100 SM00382 ATPases associated with a variety of cellular activities FORC48_5105 SM00347 helix_turn_helix multiple antibiotic resistance protein FORC48_5109 SM00382 ATPases associated with a variety of cellular activities FORC48_5113 SM00448 cheY-homologous receiver domain FORC48_5113 SM00862 Transcriptional regulatory protein, C terminal FORC48_5115 SM00316 Ribosomal protein S1-like RNA-binding domain FORC48_5115 SM00357 Cold shock protein domain FORC48_5115 SM00955 FORC48_5115 FORC48_5121 SM01192 FORC48_5121 FORC48_5121 SM01193 FORC48_5121 FORC48_5125 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FORC48_5130 SM00382 ATPases associated with a variety of cellular activities FORC48_5132 SM00387 Histidine kinase-like ATPases FORC48_5133 SM00421 helix_turn_helix, Lux Regulon FORC48_5133 SM00448 cheY-homologous receiver domain FORC48_5149 SM00028 Tetratricopeptide repeats FORC48_5157 SM00487 DEAD-like helicases superfamily FORC48_5157 SM00490 helicase superfamily c-terminal domain FORC48_5160 SM00422 helix_turn_helix, mercury resistance FORC48_5162 SM00530 Helix-turn-helix XRE-family like proteins FORC48_5165 SM00422 helix_turn_helix, mercury resistance FORC48_5167 SM00382 ATPases associated with a variety of cellular activities FORC48_5169 SM00382 ATPases associated with a variety of cellular activities FORC48_5171 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. FORC48_5171 SM00245 tail specific protease FORC48_5173 SM00382 ATPases associated with a variety of cellular activities FORC48_5177 SM00957 SecA DEAD-like domain FORC48_5177 SM00958 SecA preprotein cross-linking domain FORC48_5180 SM00357 Cold shock protein domain FORC48_5182 SM00487 DEAD-like helicases superfamily FORC48_5182 SM00490 helicase superfamily c-terminal domain FORC48_5191 SM00984 UDP binding domain FORC48_5194 SM00382 ATPases associated with a variety of cellular activities FORC48_5195 SM00754 A domain in the BMP inhibitor chordin and in microbial proteins. FORC48_5230 SM00287 Bacterial SH3 domain homologues FORC48_5237 SM00287 Bacterial SH3 domain homologues FORC48_5243 SM00487 DEAD-like helicases superfamily FORC48_5243 SM00490 helicase superfamily c-terminal domain FORC48_5252 SM00382 ATPases associated with a variety of cellular activities FORC48_5254 SM00530 Helix-turn-helix XRE-family like proteins FORC48_5259 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC48_5259 SM00387 Histidine kinase-like ATPases FORC48_5259 SM00388 His Kinase A (phosphoacceptor) domain FORC48_5260 SM00448 cheY-homologous receiver domain FORC48_5260 SM00862 Transcriptional regulatory protein, C terminal FORC48_5264 SM00984 UDP binding domain FORC48_5288 SM00382 ATPases associated with a variety of cellular activities FORC48_5289 SM00850 LytTr DNA-binding domain FORC48_5305 SM00052 Putative diguanylate phosphodiesterase FORC48_5305 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) FORC48_5305 SM00091 PAS domain FORC48_5305 SM00267 diguanylate cyclase FORC48_5309 SM00382 ATPases associated with a variety of cellular activities FORC48_5324 SM00226 Low molecular weight phosphatase family FORC48_5327 SM00903 Flavin reductase like domain FORC48_5335 SM00937 FORC48_5335 FORC48_5338 SM00357 Cold shock protein domain FORC48_5338 SM00382 ATPases associated with a variety of cellular activities FORC48_5338 SM00959 Rho termination factor, N-terminal domain FORC48_5343 SM00448 cheY-homologous receiver domain FORC48_5353 SM00155 Phospholipase D. Active site motifs. FORC48_5355 SM00052 Putative diguanylate phosphodiesterase FORC48_5355 SM00267 diguanylate cyclase FORC48_5357 SM00530 Helix-turn-helix XRE-family like proteins FORC48_5359 SM00421 helix_turn_helix, Lux Regulon FORC48_5359 SM00448 cheY-homologous receiver domain FORC48_5362 SM00382 ATPases associated with a variety of cellular activities FORC48_5370 SM00836 DALR anticodon binding domain FORC48_5370 SM01016 Arginyl tRNA synthetase N terminal dom FORC48_5379 SM00422 helix_turn_helix, mercury resistance FORC48_5387 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. FORC48_5389 SM00382 ATPases associated with a variety of cellular activities FORC48_5397 SM00936 Penicillin-binding protein 5, C-terminal domain FORC48_5406 SM00986 Uracil DNA glycosylase superfamily FORC48_5406 SM00987 UreE urease accessory protein, C-terminal domain FORC48_5408 SM00382 ATPases associated with a variety of cellular activities FORC48_5410 SM00354 helix_turn _helix lactose operon repressor FORC48_5417 SM00100 Cyclic nucleotide-monophosphate binding domain FORC48_5419 SM00421 helix_turn_helix, Lux Regulon FORC48_5419 SM00448 cheY-homologous receiver domain FORC48_5420 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. FORC48_5422 SM00267 diguanylate cyclase FORC48_5425 SM00448 cheY-homologous receiver domain FORC48_5425 SM00850 LytTr DNA-binding domain FORC48_5432 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FORC48_5442 SM00382 ATPases associated with a variety of cellular activities FORC48_5449 SM00448 cheY-homologous receiver domain FORC48_5449 SM00850 LytTr DNA-binding domain FORC48_5450 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. FORC48_5450 SM00387 Histidine kinase-like ATPases FORC48_5460 SM00487 DEAD-like helicases superfamily FORC48_5460 SM00490 helicase superfamily c-terminal domain FORC48_5461 SM01240 FORC48_5461 FORC48_5464 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. FORC48_5464 SM00387 Histidine kinase-like ATPases FORC48_5464 SM00388 His Kinase A (phosphoacceptor) domain FORC48_5467 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. FORC48_5468 SM00849 Metallo-beta-lactamase superfamily FORC48_5471 SM00091 PAS domain FORC48_5471 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FORC48_5471 SM00387 Histidine kinase-like ATPases FORC48_5471 SM00388 His Kinase A (phosphoacceptor) domain FORC48_5472 SM00448 cheY-homologous receiver domain FORC48_5472 SM00862 Transcriptional regulatory protein, C terminal FORC48_5473 SM00788 Adenylosuccinate synthetase FORC48_5476 SM00267 diguanylate cyclase FORC48_5485 SM00470 ParB-like nuclease domain FORC48_5487 SM00470 ParB-like nuclease domain FORC48_5489 SM01228 FORC48_5489 FORC48_5491 SM00393 Putative single-stranded nucleic acids-binding domain FORC48_5491 SM01245 FORC48_5491