locus-tag class description AQ16_10 PF03070 TENA/THI-4/PQQC family AQ16_1001 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AQ16_1001 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AQ16_1002 PF05389 Negative regulator of genetic competence (MecA) AQ16_1003 PF02310 B12 binding domain AQ16_1003 PF02607 B12 binding domain AQ16_1003 PF13411 MerR HTH family regulatory protein AQ16_1004 PF00149 Calcineurin-like phosphoesterase AQ16_1006 PF02517 CPBP intramembrane metalloprotease AQ16_1007 PF00270 DEAD/DEAH box helicase AQ16_1007 PF00271 Helicase conserved C-terminal domain AQ16_101 PF01734 Patatin-like phospholipase AQ16_101 PF00027 Cyclic nucleotide-binding domain AQ16_1010 PF12822 ECF transporter, substrate-specific component AQ16_1012 PF01551 Peptidase family M23 AQ16_1013 PF01923 Cobalamin adenosyltransferase AQ16_1014 PF00512 His Kinase A (phospho-acceptor) domain AQ16_1014 PF18698 Histidine kinase sensor domain AQ16_1014 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ16_1014 PF00672 HAMP domain AQ16_1014 PF00989 PAS fold AQ16_1015 PF00072 Response regulator receiver domain AQ16_1015 PF00486 Transcriptional regulatory protein, C terminal AQ16_1016 PF01578 Cytochrome C assembly protein AQ16_1017 PF05140 ResB-like family AQ16_1018 PF00578 AhpC/TSA family AQ16_1019 PF00849 RNA pseudouridylate synthase AQ16_1019 PF01479 S4 domain AQ16_1020 PF07670 Nucleoside recognition AQ16_1021 PF07670 Nucleoside recognition AQ16_1022 PF07943 Penicillin-binding protein 5, C-terminal domain AQ16_1022 PF00768 D-alanyl-D-alanine carboxypeptidase AQ16_1023 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AQ16_1023 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AQ16_1026 PF03706 Lysylphosphatidylglycerol synthase TM region AQ16_1026 PF09924 Uncharacterised conserved protein (DUF2156) AQ16_1029 PF01048 Phosphorylase superfamily AQ16_103 PF00132 Bacterial transferase hexapeptide (six repeats) AQ16_1030 PF00989 PAS fold AQ16_1030 PF00512 His Kinase A (phospho-acceptor) domain AQ16_1030 PF16736 Single Cache-like AQ16_1030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ16_1031 PF00589 Phage integrase family AQ16_1033 PF01904 Protein of unknown function DUF72 AQ16_1034 PF00989 PAS fold AQ16_1034 PF00512 His Kinase A (phospho-acceptor) domain AQ16_1034 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ16_1037 PF00912 Transglycosylase AQ16_1037 PF00905 Penicillin binding protein transpeptidase domain AQ16_1038 PF01865 Protein of unknown function DUF47 AQ16_1039 PF01384 Phosphate transporter family AQ16_1040 PF01925 Sulfite exporter TauE/SafE AQ16_1043 PF00970 Oxidoreductase FAD-binding domain AQ16_1043 PF00042 Globin AQ16_1043 PF00175 Oxidoreductase NAD-binding domain AQ16_1048 PF01209 ubiE/COQ5 methyltransferase family AQ16_105 PF07687 Peptidase dimerisation domain AQ16_105 PF01546 Peptidase family M20/M25/M40 AQ16_1050 PF05525 Branched-chain amino acid transport protein AQ16_1052 PF00072 Response regulator receiver domain AQ16_1052 PF00196 Bacterial regulatory proteins, luxR family AQ16_1053 PF07730 Histidine kinase AQ16_1053 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ16_1053 PF00672 HAMP domain AQ16_1054 PF09922 Cell wall-active antibiotics response 4TMS YvqF AQ16_1057 PF03553 Na+/H+ antiporter family AQ16_1059 PF00375 Sodium:dicarboxylate symporter family AQ16_1061 PF00209 Sodium:neurotransmitter symporter family AQ16_1063 PF01903 CbiX AQ16_1064 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AQ16_1066 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AQ16_1066 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AQ16_1068 PF14306 PUA-like domain AQ16_1068 PF01747 ATP-sulfurylase AQ16_1069 PF01507 Phosphoadenosine phosphosulfate reductase family AQ16_107 PF14171 Toxin SpoIISA, type II toxin-antitoxin system AQ16_1071 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AQ16_1071 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AQ16_1073 PF00884 Sulfatase AQ16_1074 PF01066 CDP-alcohol phosphatidyltransferase AQ16_1075 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AQ16_1075 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AQ16_1077 PF02811 PHP domain AQ16_1078 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase AQ16_1079 PF01502 Phosphoribosyl-AMP cyclohydrolase AQ16_108 PF00300 Histidine phosphatase superfamily (branch 1) AQ16_1080 PF00977 Histidine biosynthesis protein AQ16_1081 PF00977 Histidine biosynthesis protein AQ16_1082 PF00117 Glutamine amidotransferase class-I AQ16_1083 PF00475 Imidazoleglycerol-phosphate dehydratase AQ16_1084 PF00815 Histidinol dehydrogenase AQ16_1085 PF01634 ATP phosphoribosyltransferase AQ16_1086 PF13393 Histidyl-tRNA synthetase AQ16_1087 PF00694 Aconitase C-terminal domain AQ16_1088 PF00330 Aconitase family (aconitate hydratase) AQ16_1089 PF00180 Isocitrate/isopropylmalate dehydrogenase AQ16_109 PF01047 MarR family AQ16_1090 PF00682 HMGL-like AQ16_1090 PF08502 LeuA allosteric (dimerisation) domain AQ16_1091 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AQ16_1091 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AQ16_1092 PF10369 Small subunit of acetolactate synthase AQ16_1092 PF01842 ACT domain AQ16_1093 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AQ16_1093 PF00205 Thiamine pyrophosphate enzyme, central domain AQ16_1093 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AQ16_1094 PF01063 Amino-transferase class IV AQ16_1096 PF03698 Uncharacterised protein family (UPF0180) AQ16_1098 PF09579 Sporulation protein YtfJ (Spore_YtfJ) AQ16_11 PF01820 D-ala D-ala ligase N-terminus AQ16_11 PF07478 D-ala D-ala ligase C-terminus AQ16_110 PF00205 Thiamine pyrophosphate enzyme, central domain AQ16_110 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AQ16_110 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AQ16_1100 PF02386 Cation transport protein AQ16_1101 PF00375 Sodium:dicarboxylate symporter family AQ16_1103 PF01047 MarR family AQ16_1106 PF02673 Bacitracin resistance protein BacA AQ16_1107 PF01554 MatE AQ16_111 PF08241 Methyltransferase domain AQ16_1111 PF01636 Phosphotransferase enzyme family AQ16_1114 PF00258 Flavodoxin AQ16_1116 PF01546 Peptidase family M20/M25/M40 AQ16_1116 PF07687 Peptidase dimerisation domain AQ16_1118 PF13193 AMP-binding enzyme C-terminal domain AQ16_1118 PF00501 AMP-binding enzyme AQ16_1119 PF03062 MBOAT, membrane-bound O-acyltransferase family AQ16_1120 PF00550 Phosphopantetheine attachment site AQ16_1121 PF04914 DltD protein AQ16_1122 PF03060 Nitronate monooxygenase AQ16_1123 PF17676 LD-carboxypeptidase C-terminal domain AQ16_1123 PF02016 LD-carboxypeptidase N-terminal domain AQ16_1125 PF00857 Isochorismatase family AQ16_1127 PF01037 Lrp/AsnC ligand binding domain AQ16_1129 PF02517 CPBP intramembrane metalloprotease AQ16_113 PF03848 Tellurite resistance protein TehB AQ16_113 PF09313 Domain of unknown function (DUF1971) AQ16_1131 PF00005 ABC transporter AQ16_1133 PF00005 ABC transporter AQ16_1134 PF00392 Bacterial regulatory proteins, gntR family AQ16_1135 PF00268 Ribonucleotide reductase, small chain AQ16_1136 PF08343 Ribonucleotide reductase N-terminal AQ16_1136 PF00317 Ribonucleotide reductase, all-alpha domain AQ16_1136 PF02867 Ribonucleotide reductase, barrel domain AQ16_1137 PF02867 Ribonucleotide reductase, barrel domain AQ16_1137 PF00317 Ribonucleotide reductase, all-alpha domain AQ16_1137 PF08343 Ribonucleotide reductase N-terminal AQ16_1138 PF07972 NrdI Flavodoxin like AQ16_114 PF12704 MacB-like periplasmic core domain AQ16_114 PF02687 FtsX-like permease family AQ16_114 PF00005 ABC transporter AQ16_1144 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) AQ16_1145 PF14489 QueF-like protein AQ16_1146 PF04055 Radical SAM superfamily AQ16_1147 PF01242 6-pyruvoyl tetrahydropterin synthase AQ16_1148 PF06508 Queuosine biosynthesis protein QueC AQ16_1149 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ16_1149 PF00512 His Kinase A (phospho-acceptor) domain AQ16_1149 PF00989 PAS fold AQ16_1149 PF13188 PAS domain AQ16_1149 PF13426 PAS domain AQ16_1151 PF12867 DinB superfamily AQ16_1153 PF01047 MarR family AQ16_1154 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ16_1154 PF00512 His Kinase A (phospho-acceptor) domain AQ16_1154 PF02743 Cache domain AQ16_1155 PF09388 Spo0E like sporulation regulatory protein AQ16_1156 PF04748 Divergent polysaccharide deacetylase AQ16_1158 PF00596 Class II Aldolase and Adducin N-terminal domain AQ16_1159 PF01520 N-acetylmuramoyl-L-alanine amidase AQ16_1159 PF00395 S-layer homology domain AQ16_1161 PF08220 DeoR-like helix-turn-helix domain AQ16_1161 PF00455 DeoR C terminal sensor domain AQ16_1163 PF00266 Aminotransferase class-V AQ16_1164 PF13419 Haloacid dehalogenase-like hydrolase AQ16_1165 PF00528 Binding-protein-dependent transport system inner membrane component AQ16_1166 PF08402 TOBE domain AQ16_1166 PF00005 ABC transporter AQ16_117 PF17932 Tetracyclin repressor-like, C-terminal domain AQ16_117 PF00440 Bacterial regulatory proteins, tetR family AQ16_1170 PF02386 Cation transport protein AQ16_1172 PF00561 alpha/beta hydrolase fold AQ16_1177 PF01575 MaoC like domain AQ16_1178 PF00269 Small, acid-soluble spore proteins, alpha/beta type AQ16_1179 PF02386 Cation transport protein AQ16_1180 PF03741 Integral membrane protein TerC family AQ16_1181 PF01226 Formate/nitrite transporter AQ16_1183 PF06750 Bacterial Peptidase A24 N-terminal domain AQ16_1183 PF01478 Type IV leader peptidase family AQ16_1184 PF02589 LUD domain AQ16_1185 PF11870 Domain of unknown function (DUF3390) AQ16_1185 PF13183 4Fe-4S dicluster domain AQ16_1185 PF02589 LUD domain AQ16_1186 PF02754 Cysteine-rich domain AQ16_1187 PF07729 FCD domain AQ16_1187 PF00392 Bacterial regulatory proteins, gntR family AQ16_1188 PF00989 PAS fold AQ16_1188 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ16_1188 PF00512 His Kinase A (phospho-acceptor) domain AQ16_1188 PF00672 HAMP domain AQ16_1188 PF18698 Histidine kinase sensor domain AQ16_1189 PF00486 Transcriptional regulatory protein, C terminal AQ16_1189 PF00072 Response regulator receiver domain AQ16_1191 PF13556 PucR C-terminal helix-turn-helix domain AQ16_1191 PF17853 GGDEF-like domain AQ16_1191 PF05651 Putative sugar diacid recognition AQ16_1192 PF02913 FAD linked oxidases, C-terminal domain AQ16_1192 PF01565 FAD binding domain AQ16_1193 PF02754 Cysteine-rich domain AQ16_1193 PF13183 4Fe-4S dicluster domain AQ16_1194 PF00188 Cysteine-rich secretory protein family AQ16_1196 PF00849 RNA pseudouridylate synthase AQ16_1196 PF01479 S4 domain AQ16_1198 PF03176 MMPL family AQ16_1199 PF01569 PAP2 superfamily AQ16_12 PF00392 Bacterial regulatory proteins, gntR family AQ16_12 PF00155 Aminotransferase class I and II AQ16_1200 PF13416 Bacterial extracellular solute-binding protein AQ16_1201 PF00528 Binding-protein-dependent transport system inner membrane component AQ16_1202 PF00528 Binding-protein-dependent transport system inner membrane component AQ16_1203 PF08402 TOBE domain AQ16_1203 PF00005 ABC transporter AQ16_1204 PF00171 Aldehyde dehydrogenase family AQ16_1206 PF05547 Immune inhibitor A peptidase M6 AQ16_1208 PF08671 Anti-repressor SinI AQ16_1208 PF01381 Helix-turn-helix AQ16_1209 PF12389 Camelysin metallo-endopeptidase AQ16_121 PF01609 Transposase DDE domain AQ16_1211 PF12389 Camelysin metallo-endopeptidase AQ16_1213 PF07943 Penicillin-binding protein 5, C-terminal domain AQ16_1213 PF00768 D-alanyl-D-alanine carboxypeptidase AQ16_1217 PF00589 Phage integrase family AQ16_1217 PF02899 Phage integrase, N-terminal SAM-like domain AQ16_1223 PF00239 Resolvase, N terminal domain AQ16_1223 PF02796 Helix-turn-helix domain of resolvase AQ16_123 PF00270 DEAD/DEAH box helicase AQ16_123 PF00271 Helicase conserved C-terminal domain AQ16_1237 PF01381 Helix-turn-helix AQ16_1238 PF00676 Dehydrogenase E1 component AQ16_1238 PF16870 2-oxoglutarate dehydrogenase C-terminal AQ16_1238 PF02779 Transketolase, pyrimidine binding domain AQ16_1239 PF02817 e3 binding domain AQ16_1239 PF00364 Biotin-requiring enzyme AQ16_1239 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AQ16_1246 PF07992 Pyridine nucleotide-disulphide oxidoreductase AQ16_1246 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AQ16_1248 PF13240 zinc-ribbon domain AQ16_1251 PF10042 Uncharacterized conserved protein (DUF2278) AQ16_1252 PF02652 L-lactate permease AQ16_1254 PF00290 Tryptophan synthase alpha chain AQ16_1255 PF00291 Pyridoxal-phosphate dependent enzyme AQ16_1256 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AQ16_1257 PF00218 Indole-3-glycerol phosphate synthase AQ16_1258 PF02885 Glycosyl transferase family, helical bundle domain AQ16_1258 PF00591 Glycosyl transferase family, a/b domain AQ16_1259 PF00117 Glutamine amidotransferase class-I AQ16_1259 PF02885 Glycosyl transferase family, helical bundle domain AQ16_1259 PF00591 Glycosyl transferase family, a/b domain AQ16_126 PF12323 Helix-turn-helix domain AQ16_126 PF07282 Putative transposase DNA-binding domain AQ16_126 PF01385 Probable transposase AQ16_1261 PF00474 Sodium:solute symporter family AQ16_1262 PF02368 Bacterial Ig-like domain (group 2) AQ16_1266 PF00756 Putative esterase AQ16_1268 PF13673 Acetyltransferase (GNAT) domain AQ16_1269 PF00580 UvrD/REP helicase N-terminal domain AQ16_1269 PF13361 UvrD-like helicase C-terminal domain AQ16_127 PF16123 Hydroxyacylglutathione hydrolase C-terminus AQ16_127 PF00753 Metallo-beta-lactamase superfamily AQ16_1272 PF07098 Protein of unknown function (DUF1360) AQ16_1276 PF04321 RmlD substrate binding domain AQ16_1277 PF16363 GDP-mannose 4,6 dehydratase AQ16_1278 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase AQ16_1279 PF00483 Nucleotidyl transferase AQ16_1283 PF13181 Tetratricopeptide repeat AQ16_1283 PF00535 Glycosyl transferase family 2 AQ16_1285 PF05711 Macrocin-O-methyltransferase (TylF) AQ16_1286 PF08241 Methyltransferase domain AQ16_1287 PF00535 Glycosyl transferase family 2 AQ16_1288 PF01098 Cell cycle protein AQ16_1289 PF00149 Calcineurin-like phosphoesterase AQ16_1291 PF00849 RNA pseudouridylate synthase AQ16_1292 PF01513 ATP-NAD kinase AQ16_1293 PF04607 Region found in RelA / SpoT proteins AQ16_1295 PF01928 CYTH domain AQ16_1296 PF01152 Bacterial-like globin AQ16_1299 PF01432 Peptidase family M3 AQ16_1299 PF08439 Oligopeptidase F AQ16_13 PF00742 Homoserine dehydrogenase AQ16_13 PF03447 Homoserine dehydrogenase, NAD binding domain AQ16_13 PF01842 ACT domain AQ16_1301 PF13396 Phospholipase_D-nuclease N-terminal AQ16_1301 PF13091 PLD-like domain AQ16_1302 PF05389 Negative regulator of genetic competence (MecA) AQ16_1303 PF03741 Integral membrane protein TerC family AQ16_1304 PF03960 ArsC family AQ16_1306 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AQ16_1307 PF01554 MatE AQ16_1308 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AQ16_1308 PF00005 ABC transporter AQ16_1309 PF00005 ABC transporter AQ16_1309 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AQ16_131 PF07690 Major Facilitator Superfamily AQ16_1310 PF00528 Binding-protein-dependent transport system inner membrane component AQ16_1310 PF12911 N-terminal TM domain of oligopeptide transport permease C AQ16_1311 PF00528 Binding-protein-dependent transport system inner membrane component AQ16_1312 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AQ16_1314 PF00579 tRNA synthetases class I (W and Y) AQ16_1315 PF12227 Protein of unknown function (DUF3603) AQ16_1316 PF10026 Predicted Zn-dependent protease (DUF2268) AQ16_1317 PF00109 Beta-ketoacyl synthase, N-terminal domain AQ16_1317 PF02801 Beta-ketoacyl synthase, C-terminal domain AQ16_1318 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AQ16_1318 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AQ16_1319 PF10815 ComZ AQ16_132 PF01047 MarR family AQ16_1324 PF17871 AAA lid domain AQ16_1324 PF07724 AAA domain (Cdc48 subfamily) AQ16_1324 PF02861 Clp amino terminal domain, pathogenicity island component AQ16_1324 PF10431 C-terminal, D2-small domain, of ClpB protein AQ16_1324 PF00004 ATPase family associated with various cellular activities (AAA) AQ16_1325 PF14168 YjzC-like protein AQ16_1328 PF12758 Protein of unknown function (DUF3813) AQ16_1329 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 AQ16_1329 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AQ16_133 PF00291 Pyridoxal-phosphate dependent enzyme AQ16_1331 PF00639 PPIC-type PPIASE domain AQ16_1334 PF05593 RHS Repeat AQ16_1337 PF05593 RHS Repeat AQ16_1338 PF13509 S1 domain AQ16_1338 PF17783 CvfB-like winged helix domain AQ16_1339 PF04461 Protein of unknown function (DUF520) AQ16_134 PF00266 Aminotransferase class-V AQ16_1342 PF00128 Alpha amylase, catalytic domain AQ16_1343 PF00909 Ammonium Transporter Family AQ16_1344 PF06628 Catalase-related immune-responsive AQ16_1344 PF00199 Catalase AQ16_1346 PF00733 Asparagine synthase AQ16_1346 PF13537 Glutamine amidotransferase domain AQ16_1348 PF07457 Protein of unknown function (DUF1516) AQ16_1349 PF00202 Aminotransferase class-III AQ16_135 PF02660 Glycerol-3-phosphate acyltransferase AQ16_1351 PF01557 Fumarylacetoacetate (FAA) hydrolase family AQ16_1352 PF09388 Spo0E like sporulation regulatory protein AQ16_1353 PF10676 Spore germination protein gerPA/gerPF AQ16_1354 PF10803 Spore germination GerPB AQ16_1355 PF10737 Spore germination protein GerPC AQ16_1357 PF10970 Spore germination protein GerPE AQ16_1358 PF10676 Spore germination protein gerPA/gerPF AQ16_136 PF01869 BadF/BadG/BcrA/BcrD ATPase family AQ16_1360 PF00580 UvrD/REP helicase N-terminal domain AQ16_1360 PF12705 PD-(D/E)XK nuclease superfamily AQ16_1360 PF13361 UvrD-like helicase C-terminal domain AQ16_1361 PF12705 PD-(D/E)XK nuclease superfamily AQ16_1361 PF13361 UvrD-like helicase C-terminal domain AQ16_1362 PF10502 Signal peptidase, peptidase S26 AQ16_1363 PF09335 SNARE associated Golgi protein AQ16_1365 PF06338 ComK protein AQ16_1368 PF00313 'Cold-shock' DNA-binding domain AQ16_137 PF03702 Anhydro-N-acetylmuramic acid kinase AQ16_1370 PF00463 Isocitrate lyase family AQ16_1371 PF01274 Malate synthase AQ16_1372 PF00395 S-layer homology domain AQ16_1374 PF00395 S-layer homology domain AQ16_1374 PF03424 Carbohydrate binding domain (family 17/28) AQ16_1374 PF00150 Cellulase (glycosyl hydrolase family 5) AQ16_1375 PF00892 EamA-like transporter family AQ16_1376 PF01435 Peptidase family M48 AQ16_1376 PF16491 CAAX prenyl protease N-terminal, five membrane helices AQ16_1381 PF00072 Response regulator receiver domain AQ16_1381 PF00486 Transcriptional regulatory protein, C terminal AQ16_1382 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ16_1382 PF00512 His Kinase A (phospho-acceptor) domain AQ16_1385 PF12833 Helix-turn-helix domain AQ16_1385 PF06445 GyrI-like small molecule binding domain AQ16_1386 PF08281 Sigma-70, region 4 AQ16_1386 PF04542 Sigma-70 region 2 AQ16_1388 PF01966 HD domain AQ16_1389 PF00149 Calcineurin-like phosphoesterase AQ16_139 PF02378 Phosphotransferase system, EIIC AQ16_1390 PF12146 Serine aminopeptidase, S33 AQ16_1391 PF00440 Bacterial regulatory proteins, tetR family AQ16_1392 PF07968 Leukocidin/Hemolysin toxin family AQ16_1394 PF13193 AMP-binding enzyme C-terminal domain AQ16_1394 PF00501 AMP-binding enzyme AQ16_1396 PF03099 Biotin/lipoate A/B protein ligase family AQ16_1396 PF10437 Bacterial lipoate protein ligase C-terminus AQ16_1397 PF12706 Beta-lactamase superfamily domain AQ16_1398 PF14149 YhfH-like protein AQ16_1399 PF00356 Bacterial regulatory proteins, lacI family AQ16_1400 PF13302 Acetyltransferase (GNAT) domain AQ16_1404 PF00440 Bacterial regulatory proteins, tetR family AQ16_1404 PF17932 Tetracyclin repressor-like, C-terminal domain AQ16_141 PF02638 Glycosyl hydrolase-like 10 AQ16_1411 PF01208 Uroporphyrinogen decarboxylase (URO-D) AQ16_1412 PF00905 Penicillin binding protein transpeptidase domain AQ16_1412 PF00912 Transglycosylase AQ16_1413 PF03992 Antibiotic biosynthesis monooxygenase AQ16_1414 PF03703 Bacterial PH domain AQ16_1415 PF03703 Bacterial PH domain AQ16_1418 PF03703 Bacterial PH domain AQ16_1419 PF03703 Bacterial PH domain AQ16_1421 PF17934 Tetracyclin repressor-like, C-terminal domain AQ16_1421 PF00440 Bacterial regulatory proteins, tetR family AQ16_1423 PF12787 EcsC protein family AQ16_1424 PF05975 Bacterial ABC transporter protein EcsB AQ16_1425 PF00005 ABC transporter AQ16_1426 PF01230 HIT domain AQ16_1427 PF12732 YtxH-like protein AQ16_1428 PF01047 MarR family AQ16_1437 PF04542 Sigma-70 region 2 AQ16_1437 PF08281 Sigma-70, region 4 AQ16_1439 PF01266 FAD dependent oxidoreductase AQ16_1439 PF16901 C-terminal domain of alpha-glycerophosphate oxidase AQ16_1440 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AQ16_1440 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AQ16_1441 PF00230 Major intrinsic protein AQ16_1442 PF04309 Glycerol-3-phosphate responsive antiterminator AQ16_1445 PF00561 alpha/beta hydrolase fold AQ16_1445 PF08386 TAP-like protein AQ16_1447 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AQ16_1448 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AQ16_1449 PF00144 Beta-lactamase AQ16_1450 PF01966 HD domain AQ16_1450 PF01336 OB-fold nucleic acid binding domain AQ16_1451 PF13514 AAA domain AQ16_1452 PF00149 Calcineurin-like phosphoesterase AQ16_1455 PF11121 Protein of unknown function (DUF2639) AQ16_1458 PF08240 Alcohol dehydrogenase GroES-like domain AQ16_1458 PF00107 Zinc-binding dehydrogenase AQ16_146 PF12680 SnoaL-like domain AQ16_146 PF08281 Sigma-70, region 4 AQ16_146 PF04542 Sigma-70 region 2 AQ16_1462 PF01906 Putative heavy-metal-binding AQ16_1467 PF00672 HAMP domain AQ16_1467 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AQ16_1467 PF00072 Response regulator receiver domain AQ16_1467 PF00512 His Kinase A (phospho-acceptor) domain AQ16_1467 PF01627 Hpt domain AQ16_1467 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ16_1468 PF01739 CheR methyltransferase, SAM binding domain AQ16_1468 PF03705 CheR methyltransferase, all-alpha domain AQ16_1469 PF13426 PAS domain AQ16_1469 PF07228 Stage II sporulation protein E (SpoIIE) AQ16_147 PF07992 Pyridine nucleotide-disulphide oxidoreductase AQ16_1471 PF04545 Sigma-70, region 4 AQ16_1471 PF04539 Sigma-70 region 3 AQ16_1471 PF04542 Sigma-70 region 2 AQ16_1472 PF13581 Histidine kinase-like ATPase domain AQ16_1473 PF01740 STAS domain AQ16_1475 PF04226 Transglycosylase associated protein AQ16_1477 PF11181 Heat induced stress protein YflT AQ16_1480 PF12697 Alpha/beta hydrolase family AQ16_1483 PF00395 S-layer homology domain AQ16_1483 PF00150 Cellulase (glycosyl hydrolase family 5) AQ16_1483 PF03424 Carbohydrate binding domain (family 17/28) AQ16_1487 PF02368 Bacterial Ig-like domain (group 2) AQ16_1487 PF00395 S-layer homology domain AQ16_1489 PF00672 HAMP domain AQ16_1489 PF01966 HD domain AQ16_149 PF02824 TGS domain AQ16_149 PF04607 Region found in RelA / SpoT proteins AQ16_149 PF13291 ACT domain AQ16_1492 PF18801 response regulator aspartate phosphatase H, N terminal AQ16_1494 PF02733 Dak1 domain AQ16_1496 PF02733 Dak1 domain AQ16_1500 PF01066 CDP-alcohol phosphatidyltransferase AQ16_1511 PF07690 Major Facilitator Superfamily AQ16_1514 PF03606 C4-dicarboxylate anaerobic carrier AQ16_1515 PF07722 Peptidase C26 AQ16_1516 PF02954 Bacterial regulatory protein, Fis family AQ16_1516 PF13426 PAS domain AQ16_1516 PF00158 Sigma-54 interaction domain AQ16_1518 PF01925 Sulfite exporter TauE/SafE AQ16_1520 PF00772 DnaB-like helicase N terminal domain AQ16_1520 PF03796 DnaB-like helicase C terminal domain AQ16_1523 PF00772 DnaB-like helicase N terminal domain AQ16_1523 PF03796 DnaB-like helicase C terminal domain AQ16_1539 PF02342 TerD domain AQ16_154 PF01381 Helix-turn-helix AQ16_154 PF07883 Cupin domain AQ16_1540 PF03401 Tripartite tricarboxylate transporter family receptor AQ16_1541 PF08279 HTH domain AQ16_1541 PF00072 Response regulator receiver domain AQ16_1541 PF12431 Transcriptional regulator AQ16_1542 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain AQ16_1542 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ16_1543 PF00083 Sugar (and other) transporter AQ16_1548 PF08924 Domain of unknown function (DUF1906) AQ16_1548 PF01471 Putative peptidoglycan binding domain AQ16_1549 PF01381 Helix-turn-helix AQ16_155 PF01810 LysE type translocator AQ16_1553 PF01510 N-acetylmuramoyl-L-alanine amidase AQ16_1557 PF08924 Domain of unknown function (DUF1906) AQ16_1557 PF01471 Putative peptidoglycan binding domain AQ16_1564 PF03796 DnaB-like helicase C terminal domain AQ16_1564 PF00772 DnaB-like helicase N terminal domain AQ16_1570 PF02423 Ornithine cyclodeaminase/mu-crystallin family AQ16_1571 PF05544 Proline racemase AQ16_1572 PF11121 Protein of unknown function (DUF2639) AQ16_1574 PF00395 S-layer homology domain AQ16_1574 PF01520 N-acetylmuramoyl-L-alanine amidase AQ16_1575 PF05343 M42 glutamyl aminopeptidase AQ16_1579 PF00378 Enoyl-CoA hydratase/isomerase AQ16_158 PF00664 ABC transporter transmembrane region AQ16_158 PF00005 ABC transporter AQ16_1581 PF03062 MBOAT, membrane-bound O-acyltransferase family AQ16_1583 PF00395 S-layer homology domain AQ16_1584 PF00395 S-layer homology domain AQ16_1584 PF02368 Bacterial Ig-like domain (group 2) AQ16_1584 PF13205 Bacterial Ig-like domain AQ16_1586 PF01943 Polysaccharide biosynthesis protein AQ16_1586 PF14667 Polysaccharide biosynthesis C-terminal domain AQ16_1587 PF07516 SecA Wing and Scaffold domain AQ16_1587 PF01043 SecA preprotein cross-linking domain AQ16_1587 PF07517 SecA DEAD-like domain AQ16_159 PF00664 ABC transporter transmembrane region AQ16_159 PF00005 ABC transporter AQ16_1592 PF00916 Sulfate permease family AQ16_1592 PF01740 STAS domain AQ16_1594 PF06445 GyrI-like small molecule binding domain AQ16_1594 PF13411 MerR HTH family regulatory protein AQ16_1596 PF09335 SNARE associated Golgi protein AQ16_1597 PF17802 Prealbumin-like fold domain AQ16_1597 PF05737 Collagen binding domain AQ16_1597 PF05738 Cna protein B-type domain AQ16_1598 PF13193 AMP-binding enzyme C-terminal domain AQ16_1598 PF00501 AMP-binding enzyme AQ16_1599 PF04055 Radical SAM superfamily AQ16_1600 PF01510 N-acetylmuramoyl-L-alanine amidase AQ16_1600 PF01471 Putative peptidoglycan binding domain AQ16_1603 PF02245 Methylpurine-DNA glycosylase (MPG) AQ16_1605 PF03306 Alpha-acetolactate decarboxylase AQ16_1606 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AQ16_1606 PF00205 Thiamine pyrophosphate enzyme, central domain AQ16_1606 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AQ16_1608 PF01048 Phosphorylase superfamily AQ16_1611 PF06133 Control of competence regulator ComK, YlbF/YmcA AQ16_1612 PF04286 Protein of unknown function (DUF445) AQ16_1614 PF14398 YheC/D like ATP-grasp AQ16_1616 PF00269 Small, acid-soluble spore proteins, alpha/beta type AQ16_1617 PF00005 ABC transporter AQ16_1618 PF00528 Binding-protein-dependent transport system inner membrane component AQ16_1619 PF00497 Bacterial extracellular solute-binding proteins, family 3 AQ16_1620 PF00005 ABC transporter AQ16_1620 PF00664 ABC transporter transmembrane region AQ16_1621 PF00664 ABC transporter transmembrane region AQ16_1621 PF00005 ABC transporter AQ16_1622 PF00171 Aldehyde dehydrogenase family AQ16_1624 PF01177 Asp/Glu/Hydantoin racemase AQ16_1625 PF13520 Amino acid permease AQ16_1627 PF01965 DJ-1/PfpI family AQ16_163 PF03473 MOSC domain AQ16_163 PF03475 3-alpha domain AQ16_1630 PF02525 Flavodoxin-like fold AQ16_1632 PF01638 HxlR-like helix-turn-helix AQ16_1634 PF02687 FtsX-like permease family AQ16_1635 PF00005 ABC transporter AQ16_1636 PF02687 FtsX-like permease family AQ16_1636 PF12704 MacB-like periplasmic core domain AQ16_1637 PF00005 ABC transporter AQ16_1639 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ16_1639 PF00512 His Kinase A (phospho-acceptor) domain AQ16_164 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AQ16_164 PF03466 LysR substrate binding domain AQ16_1640 PF00072 Response regulator receiver domain AQ16_1640 PF00486 Transcriptional regulatory protein, C terminal AQ16_1642 PF07690 Major Facilitator Superfamily AQ16_1643 PF00440 Bacterial regulatory proteins, tetR family AQ16_1643 PF17934 Tetracyclin repressor-like, C-terminal domain AQ16_1644 PF00893 Small Multidrug Resistance protein AQ16_1645 PF00893 Small Multidrug Resistance protein AQ16_1646 PF13411 MerR HTH family regulatory protein AQ16_1647 PF00106 short chain dehydrogenase AQ16_1647 PF00561 alpha/beta hydrolase fold AQ16_1649 PF01037 Lrp/AsnC ligand binding domain AQ16_1650 PF00892 EamA-like transporter family AQ16_1653 PF07681 DoxX AQ16_1655 PF02378 Phosphotransferase system, EIIC AQ16_1655 PF00367 phosphotransferase system, EIIB AQ16_1656 PF13580 SIS domain AQ16_1657 PF01418 Helix-turn-helix domain, rpiR family AQ16_1657 PF01380 SIS domain AQ16_1659 PF00999 Sodium/hydrogen exchanger family AQ16_1660 PF13520 Amino acid permease AQ16_1667 PF09335 SNARE associated Golgi protein AQ16_1669 PF02735 Ku70/Ku80 beta-barrel domain AQ16_167 PF01118 Semialdehyde dehydrogenase, NAD binding domain AQ16_167 PF02774 Semialdehyde dehydrogenase, dimerisation domain AQ16_1672 PF11007 Spore coat associated protein JA (CotJA) AQ16_1673 PF12652 CotJB protein AQ16_1674 PF05067 Manganese containing catalase AQ16_1675 PF05525 Branched-chain amino acid transport protein AQ16_1679 PF09529 Integral membrane protein (intg_mem_TP0381) AQ16_168 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AQ16_168 PF03466 LysR substrate binding domain AQ16_1681 PF00005 ABC transporter AQ16_1682 PF02687 FtsX-like permease family AQ16_1682 PF12704 MacB-like periplasmic core domain AQ16_1683 PF01476 LysM domain AQ16_1683 PF06725 3D domain AQ16_1686 PF02378 Phosphotransferase system, EIIC AQ16_1687 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AQ16_1688 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit AQ16_1689 PF08279 HTH domain AQ16_1689 PF05043 Mga helix-turn-helix domain AQ16_1689 PF00874 PRD domain AQ16_1689 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AQ16_1691 PF07690 Major Facilitator Superfamily AQ16_1692 PF02690 Na+/Pi-cotransporter AQ16_1693 PF08240 Alcohol dehydrogenase GroES-like domain AQ16_1693 PF00107 Zinc-binding dehydrogenase AQ16_1694 PF03816 Cell envelope-related transcriptional attenuator domain AQ16_1696 PF01925 Sulfite exporter TauE/SafE AQ16_1697 PF13686 DsrE/DsrF/DrsH-like family AQ16_1699 PF01206 Sulfurtransferase TusA AQ16_1699 PF00581 Rhodanese-like domain AQ16_17 PF02687 FtsX-like permease family AQ16_1701 PF01206 Sulfurtransferase TusA AQ16_1702 PF01206 Sulfurtransferase TusA AQ16_1703 PF00753 Metallo-beta-lactamase superfamily AQ16_1703 PF00581 Rhodanese-like domain AQ16_1704 PF01206 Sulfurtransferase TusA AQ16_1704 PF00581 Rhodanese-like domain AQ16_1705 PF02583 Metal-sensitive transcriptional repressor AQ16_1706 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AQ16_1706 PF07992 Pyridine nucleotide-disulphide oxidoreductase AQ16_1708 PF00089 Trypsin AQ16_1710 PF04293 SpoVR like protein AQ16_1711 PF00881 Nitroreductase family AQ16_1713 PF03323 Bacillus/Clostridium GerA spore germination protein AQ16_1715 PF03845 Spore germination protein AQ16_1717 PF14148 YhdB-like protein AQ16_1718 PF02600 Disulfide bond formation protein DsbB AQ16_1719 PF00085 Thioredoxin AQ16_1722 PF03734 L,D-transpeptidase catalytic domain AQ16_1722 PF17969 L,D-transpeptidase C-terminal domain AQ16_1724 PF00860 Permease family AQ16_1726 PF13276 HTH-like domain AQ16_1726 PF00665 Integrase core domain AQ16_1726 PF13333 Integrase core domain AQ16_1728 PF00005 ABC transporter AQ16_1733 PF01047 MarR family AQ16_1735 PF02702 Osmosensitive K+ channel His kinase sensor domain AQ16_1737 PF02669 K+-transporting ATPase, c chain AQ16_1739 PF03814 Potassium-transporting ATPase A subunit AQ16_174 PF00313 'Cold-shock' DNA-binding domain AQ16_1743 PF08543 Phosphomethylpyrimidine kinase AQ16_1744 PF00899 ThiF family AQ16_1745 PF05690 Thiazole biosynthesis protein ThiG AQ16_1746 PF02597 ThiS family AQ16_1747 PF01266 FAD dependent oxidoreductase AQ16_1748 PF02581 Thiamine monophosphate synthase AQ16_1749 PF09084 NMT1/THI5 like AQ16_1750 PF00528 Binding-protein-dependent transport system inner membrane component AQ16_1751 PF00005 ABC transporter AQ16_1752 PF03070 TENA/THI-4/PQQC family AQ16_1753 PF00246 Zinc carboxypeptidase AQ16_1753 PF08239 Bacterial SH3 domain AQ16_1756 PF00571 CBS domain AQ16_176 PF13302 Acetyltransferase (GNAT) domain AQ16_1781 PF00873 AcrB/AcrD/AcrF family AQ16_1784 PF00528 Binding-protein-dependent transport system inner membrane component AQ16_1785 PF00528 Binding-protein-dependent transport system inner membrane component AQ16_1786 PF12849 PBP superfamily domain AQ16_1787 PF07670 Nucleoside recognition AQ16_1787 PF02421 Ferrous iron transport protein B AQ16_1787 PF17910 FeoB cytosolic helical domain AQ16_1787 PF07664 Ferrous iron transport protein B C terminus AQ16_1787 PF04023 FeoA domain AQ16_1788 PF02421 Ferrous iron transport protein B AQ16_1788 PF07670 Nucleoside recognition AQ16_1788 PF17910 FeoB cytosolic helical domain AQ16_1788 PF07664 Ferrous iron transport protein B C terminus AQ16_1789 PF07670 Nucleoside recognition AQ16_1789 PF02421 Ferrous iron transport protein B AQ16_1789 PF17910 FeoB cytosolic helical domain AQ16_1789 PF07664 Ferrous iron transport protein B C terminus AQ16_179 PF00561 alpha/beta hydrolase fold AQ16_1790 PF05504 Spore germination B3/ GerAC like, C-terminal AQ16_1791 PF03845 Spore germination protein AQ16_1792 PF03323 Bacillus/Clostridium GerA spore germination protein AQ16_1793 PF00474 Sodium:solute symporter family AQ16_1794 PF11755 Protein of unknown function (DUF3311) AQ16_1795 PF07687 Peptidase dimerisation domain AQ16_1795 PF01546 Peptidase family M20/M25/M40 AQ16_1796 PF13529 Peptidase_C39 like family AQ16_1797 PF00324 Amino acid permease AQ16_1798 PF02790 Cytochrome C oxidase subunit II, transmembrane domain AQ16_1799 PF00115 Cytochrome C and Quinol oxidase polypeptide I AQ16_18 PF00005 ABC transporter AQ16_1800 PF00510 Cytochrome c oxidase subunit III AQ16_1802 PF02254 TrkA-N domain AQ16_1802 PF02080 TrkA-C domain AQ16_1802 PF00999 Sodium/hydrogen exchanger family AQ16_1803 PF13673 Acetyltransferase (GNAT) domain AQ16_1806 PF00860 Permease family AQ16_1807 PF00324 Amino acid permease AQ16_1810 PF05525 Branched-chain amino acid transport protein AQ16_1811 PF00854 POT family AQ16_1812 PF04203 Sortase domain AQ16_1814 PF01381 Helix-turn-helix AQ16_1815 PF07501 G5 domain AQ16_1815 PF03990 G5-linked-Ubiquitin-like domain AQ16_1815 PF06725 3D domain AQ16_1816 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AQ16_1816 PF02743 Cache domain AQ16_1816 PF00672 HAMP domain AQ16_1817 PF02673 Bacitracin resistance protein BacA AQ16_1822 PF03372 Endonuclease/Exonuclease/phosphatase family AQ16_1823 PF00882 Zinc dependent phospholipase C AQ16_1825 PF00107 Zinc-binding dehydrogenase AQ16_1825 PF08240 Alcohol dehydrogenase GroES-like domain AQ16_1827 PF05547 Immune inhibitor A peptidase M6 AQ16_1828 PF00923 Transaldolase/Fructose-6-phosphate aldolase AQ16_1829 PF13407 Periplasmic binding protein domain AQ16_1830 PF02653 Branched-chain amino acid transport system / permease component AQ16_1831 PF00005 ABC transporter AQ16_1832 PF05025 RbsD / FucU transport protein family AQ16_1833 PF00294 pfkB family carbohydrate kinase AQ16_1834 PF00356 Bacterial regulatory proteins, lacI family AQ16_1835 PF07690 Major Facilitator Superfamily AQ16_1836 PF01047 MarR family AQ16_1837 PF07690 Major Facilitator Superfamily AQ16_1838 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AQ16_1838 PF00005 ABC transporter AQ16_1839 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AQ16_1839 PF00005 ABC transporter AQ16_184 PF00583 Acetyltransferase (GNAT) family AQ16_1840 PF00528 Binding-protein-dependent transport system inner membrane component AQ16_1841 PF00528 Binding-protein-dependent transport system inner membrane component AQ16_1842 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AQ16_1844 PF00582 Universal stress protein family AQ16_1845 PF01740 STAS domain AQ16_1845 PF00916 Sulfate permease family AQ16_1847 PF00072 Response regulator receiver domain AQ16_1847 PF00486 Transcriptional regulatory protein, C terminal AQ16_1848 PF00989 PAS fold AQ16_1848 PF00512 His Kinase A (phospho-acceptor) domain AQ16_1848 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ16_1848 PF00672 HAMP domain AQ16_1848 PF18698 Histidine kinase sensor domain AQ16_1849 PF01872 RibD C-terminal domain AQ16_1850 PF13280 WYL domain AQ16_1850 PF08279 HTH domain AQ16_1855 PF00324 Amino acid permease AQ16_1856 PF00528 Binding-protein-dependent transport system inner membrane component AQ16_1857 PF00528 Binding-protein-dependent transport system inner membrane component AQ16_1858 PF00497 Bacterial extracellular solute-binding proteins, family 3 AQ16_1859 PF00005 ABC transporter AQ16_186 PF00302 Chloramphenicol acetyltransferase AQ16_1860 PF01235 Sodium:alanine symporter family AQ16_1861 PF01636 Phosphotransferase enzyme family AQ16_1862 PF12389 Camelysin metallo-endopeptidase AQ16_1863 PF05922 Peptidase inhibitor I9 AQ16_1863 PF02225 PA domain AQ16_1863 PF00082 Subtilase family AQ16_1863 PF13860 FlgD Ig-like domain AQ16_1864 PF00072 Response regulator receiver domain AQ16_1864 PF00196 Bacterial regulatory proteins, luxR family AQ16_1865 PF07730 Histidine kinase AQ16_1865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ16_1865 PF13492 GAF domain AQ16_1866 PF03323 Bacillus/Clostridium GerA spore germination protein AQ16_1870 PF00128 Alpha amylase, catalytic domain AQ16_1870 PF16657 Maltogenic Amylase, C-terminal domain AQ16_1871 PF02378 Phosphotransferase system, EIIC AQ16_1871 PF00367 phosphotransferase system, EIIB AQ16_1872 PF00392 Bacterial regulatory proteins, gntR family AQ16_1872 PF07702 UTRA domain AQ16_1873 PF13520 Amino acid permease AQ16_1874 PF03707 Bacterial signalling protein N terminal repeat AQ16_1874 PF00990 Diguanylate cyclase, GGDEF domain AQ16_1874 PF00563 EAL domain AQ16_1877 PF13091 PLD-like domain AQ16_1877 PF13396 Phospholipase_D-nuclease N-terminal AQ16_1878 PF07728 AAA domain (dynein-related subfamily) AQ16_1879 PF00092 von Willebrand factor type A domain AQ16_188 PF03176 MMPL family AQ16_1880 PF00293 NUDIX domain AQ16_1880 PF13344 Haloacid dehalogenase-like hydrolase AQ16_1881 PF00156 Phosphoribosyl transferase domain AQ16_1882 PF01370 NAD dependent epimerase/dehydratase family AQ16_1883 PF00155 Aminotransferase class I and II AQ16_1884 PF08241 Methyltransferase domain AQ16_1885 PF00005 ABC transporter AQ16_1886 PF01032 FecCD transport family AQ16_1887 PF01032 FecCD transport family AQ16_1888 PF01497 Periplasmic binding protein AQ16_1889 PF00854 POT family AQ16_1890 PF08141 Small acid-soluble spore protein H family AQ16_1891 PF01022 Bacterial regulatory protein, arsR family AQ16_1892 PF02652 L-lactate permease AQ16_1893 PF00206 Lyase AQ16_1893 PF10415 Fumarase C C-terminus AQ16_1894 PF01595 Cyclin M transmembrane N-terminal domain AQ16_1894 PF00571 CBS domain AQ16_1894 PF03471 Transporter associated domain AQ16_1895 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AQ16_1896 PF01773 Na+ dependent nucleoside transporter N-terminus AQ16_1896 PF07662 Na+ dependent nucleoside transporter C-terminus AQ16_1897 PF03816 Cell envelope-related transcriptional attenuator domain AQ16_1898 PF04294 VanW like protein AQ16_1902 PF01447 Thermolysin metallopeptidase, catalytic domain AQ16_1902 PF07504 Fungalysin/Thermolysin Propeptide Motif AQ16_1902 PF03413 Peptidase propeptide and YPEB domain AQ16_1902 PF02868 Thermolysin metallopeptidase, alpha-helical domain AQ16_1905 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain AQ16_1905 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain AQ16_1905 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AQ16_1906 PF00403 Heavy-metal-associated domain AQ16_1907 PF01022 Bacterial regulatory protein, arsR family AQ16_1908 PF13520 Amino acid permease AQ16_1909 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AQ16_1909 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AQ16_191 PF01047 MarR family AQ16_1911 PF07849 Protein of unknown function (DUF1641) AQ16_1912 PF00037 4Fe-4S binding domain AQ16_1912 PF00384 Molybdopterin oxidoreductase AQ16_1912 PF01568 Molydopterin dinucleotide binding domain AQ16_1912 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AQ16_1912 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AQ16_1913 PF02634 FdhD/NarQ family AQ16_1914 PF13508 Acetyltransferase (GNAT) domain AQ16_1914 PF00583 Acetyltransferase (GNAT) family AQ16_1916 PF00486 Transcriptional regulatory protein, C terminal AQ16_1916 PF00072 Response regulator receiver domain AQ16_1917 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ16_1917 PF18698 Histidine kinase sensor domain AQ16_1917 PF00672 HAMP domain AQ16_1917 PF00989 PAS fold AQ16_1917 PF00512 His Kinase A (phospho-acceptor) domain AQ16_1919 PF00392 Bacterial regulatory proteins, gntR family AQ16_1919 PF00155 Aminotransferase class I and II AQ16_1920 PF00892 EamA-like transporter family AQ16_1922 PF00390 Malic enzyme, N-terminal domain AQ16_1922 PF03949 Malic enzyme, NAD binding domain AQ16_1923 PF03390 2-hydroxycarboxylate transporter family AQ16_1924 PF00072 Response regulator receiver domain AQ16_1925 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain AQ16_1925 PF17203 Single cache domain 3 AQ16_1925 PF00989 PAS fold AQ16_1925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ16_1926 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AQ16_1926 PF00672 HAMP domain AQ16_1926 PF02743 Cache domain AQ16_1927 PF13529 Peptidase_C39 like family AQ16_1929 PF00512 His Kinase A (phospho-acceptor) domain AQ16_1929 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ16_1930 PF00486 Transcriptional regulatory protein, C terminal AQ16_1930 PF00072 Response regulator receiver domain AQ16_1935 PF03600 Citrate transporter AQ16_1936 PF00072 Response regulator receiver domain AQ16_1936 PF12431 Transcriptional regulator AQ16_1937 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain AQ16_1937 PF17203 Single cache domain 3 AQ16_1937 PF00989 PAS fold AQ16_1937 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ16_1938 PF02743 Cache domain AQ16_1938 PF00672 HAMP domain AQ16_1938 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AQ16_1939 PF01145 SPFH domain / Band 7 family AQ16_1939 PF15975 Flotillin AQ16_1941 PF08453 Peptidase family M9 N-terminal AQ16_1941 PF01752 Collagenase AQ16_1941 PF18496 Collagenase G catalytic helper subdomain AQ16_1942 PF02028 BCCT, betaine/carnitine/choline family transporter AQ16_1945 PF00072 Response regulator receiver domain AQ16_1945 PF04397 LytTr DNA-binding domain AQ16_1946 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ16_1946 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain AQ16_1948 PF04647 Accessory gene regulator B AQ16_1956 PF00005 ABC transporter AQ16_1964 PF00005 ABC transporter AQ16_1965 PF04285 Protein of unknown function (DUF444) AQ16_1966 PF06798 PrkA serine protein kinase C-terminal domain AQ16_1966 PF08298 PrkA AAA domain AQ16_1968 PF03707 Bacterial signalling protein N terminal repeat AQ16_1968 PF00990 Diguanylate cyclase, GGDEF domain AQ16_1968 PF00563 EAL domain AQ16_1969 PF00588 SpoU rRNA Methylase family AQ16_1970 PF12671 Putative amidase domain AQ16_1971 PF08331 Domain of unknown function (DUF1730) AQ16_1973 PF13462 Thioredoxin AQ16_1974 PF00905 Penicillin binding protein transpeptidase domain AQ16_1974 PF00912 Transglycosylase AQ16_1975 PF00293 NUDIX domain AQ16_1975 PF13344 Haloacid dehalogenase-like hydrolase AQ16_1976 PF01709 Transcriptional regulator AQ16_199 PF13649 Methyltransferase domain AQ16_1997 PF11023 Zinc-ribbon containing domain AQ16_1998 PF01475 Ferric uptake regulator family AQ16_1999 PF00578 AhpC/TSA family AQ16_2000 PF07885 Ion channel AQ16_2003 PF00005 ABC transporter AQ16_2004 PF00202 Aminotransferase class-III AQ16_2005 PF04898 Glutamate synthase central domain AQ16_2005 PF01645 Conserved region in glutamate synthase AQ16_2005 PF00310 Glutamine amidotransferases class-II AQ16_2005 PF01493 GXGXG motif AQ16_2006 PF06081 Aromatic acid exporter family member 1 AQ16_2007 PF00005 ABC transporter AQ16_2007 PF00664 ABC transporter transmembrane region AQ16_2008 PF04167 Protein of unknown function (DUF402) AQ16_2009 PF14182 YgaB-like protein AQ16_2010 PF04259 Small, acid-soluble spore protein, gamma-type AQ16_2012 PF00730 HhH-GPD superfamily base excision DNA repair protein AQ16_2012 PF14815 NUDIX domain AQ16_2013 PF04307 LexA-binding, inner membrane-associated putative hydrolase AQ16_2014 PF14043 WVELL protein AQ16_2015 PF08176 Small acid-soluble spore protein K family AQ16_2018 PF02631 RecX family AQ16_2019 PF01370 NAD dependent epimerase/dehydratase family AQ16_2019 PF08338 Domain of unknown function (DUF1731) AQ16_2020 PF01979 Amidohydrolase family AQ16_2023 PF04101 Glycosyltransferase family 28 C-terminal domain AQ16_2023 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase AQ16_2024 PF04055 Radical SAM superfamily AQ16_2025 PF02901 Pyruvate formate lyase-like AQ16_2025 PF01228 Glycine radical AQ16_2026 PF00535 Glycosyl transferase family 2 AQ16_2027 PF01370 NAD dependent epimerase/dehydratase family AQ16_2027 PF00551 Formyl transferase AQ16_2027 PF02911 Formyl transferase, C-terminal domain AQ16_2028 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AQ16_2028 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AQ16_2028 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AQ16_2029 PF00535 Glycosyl transferase family 2 AQ16_2033 PF00144 Beta-lactamase AQ16_2034 PF00367 phosphotransferase system, EIIB AQ16_2034 PF02378 Phosphotransferase system, EIIC AQ16_2035 PF04960 Glutaminase AQ16_2040 PF01546 Peptidase family M20/M25/M40 AQ16_2040 PF07687 Peptidase dimerisation domain AQ16_2041 PF00324 Amino acid permease AQ16_2043 PF00158 Sigma-54 interaction domain AQ16_2043 PF13426 PAS domain AQ16_2043 PF02954 Bacterial regulatory protein, Fis family AQ16_2045 PF01416 tRNA pseudouridine synthase AQ16_2046 PF05958 tRNA (Uracil-5-)-methyltransferase AQ16_2046 PF01938 TRAM domain AQ16_2047 PF00730 HhH-GPD superfamily base excision DNA repair protein AQ16_2048 PF01522 Polysaccharide deacetylase AQ16_2049 PF05683 Fumarase C-terminus AQ16_2049 PF05681 Fumarate hydratase (Fumerase) AQ16_205 PF07690 Major Facilitator Superfamily AQ16_2051 PF08756 YfkB-like domain AQ16_2051 PF04055 Radical SAM superfamily AQ16_2052 PF14167 YfkD-like protein AQ16_2053 PF01699 Sodium/calcium exchanger protein AQ16_2054 PF16242 Pyridoxamine 5'-phosphate oxidase like AQ16_2057 PF09335 SNARE associated Golgi protein AQ16_2059 PF10502 Signal peptidase, peptidase S26 AQ16_2061 PF00892 EamA-like transporter family AQ16_2063 PF03631 Virulence factor BrkB AQ16_2065 PF01451 Low molecular weight phosphotyrosine protein phosphatase AQ16_2066 PF06569 Protein of unknown function (DUF1128) AQ16_2067 PF00690 Cation transporter/ATPase, N-terminus AQ16_2067 PF00689 Cation transporting ATPase, C-terminus AQ16_2068 PF05816 Toxic anion resistance protein (TelA) AQ16_2069 PF14266 Putative component of 'biosynthetic module' AQ16_207 PF00005 ABC transporter AQ16_2070 PF03741 Integral membrane protein TerC family AQ16_2071 PF02342 TerD domain AQ16_2072 PF02342 TerD domain AQ16_2073 PF02342 TerD domain AQ16_2074 PF00480 ROK family AQ16_2076 PF03129 Anticodon binding domain AQ16_2076 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AQ16_2076 PF09180 Prolyl-tRNA synthetase, C-terminal AQ16_2079 PF11700 Vacuole effluxer Atg22 like AQ16_208 PF11188 Protein of unknown function (DUF2975) AQ16_2083 PF08360 QacR-like protein, C-terminal region AQ16_2083 PF00440 Bacterial regulatory proteins, tetR family AQ16_2089 PF00704 Glycosyl hydrolases family 18 AQ16_2089 PF00041 Fibronectin type III domain AQ16_209 PF02824 TGS domain AQ16_209 PF03129 Anticodon binding domain AQ16_209 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AQ16_209 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AQ16_2090 PF12848 ABC transporter AQ16_2090 PF00005 ABC transporter AQ16_2092 PF00005 ABC transporter AQ16_2094 PF00528 Binding-protein-dependent transport system inner membrane component AQ16_2095 PF01910 Thiamine-binding protein AQ16_2096 PF00672 HAMP domain AQ16_2096 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AQ16_2097 PF03605 Anaerobic c4-dicarboxylate membrane transporter AQ16_2098 PF02581 Thiamine monophosphate synthase AQ16_2099 PF02110 Hydroxyethylthiazole kinase family AQ16_210 PF01479 S4 domain AQ16_210 PF00849 RNA pseudouridylate synthase AQ16_2100 PF01751 Toprim domain AQ16_2100 PF01131 DNA topoisomerase AQ16_2101 PF01061 ABC-2 type transporter AQ16_2102 PF03372 Endonuclease/Exonuclease/phosphatase family AQ16_2103 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AQ16_2103 PF00367 phosphotransferase system, EIIB AQ16_2103 PF02378 Phosphotransferase system, EIIC AQ16_2104 PF16657 Maltogenic Amylase, C-terminal domain AQ16_2104 PF00128 Alpha amylase, catalytic domain AQ16_2105 PF08031 Berberine and berberine like AQ16_2105 PF01565 FAD binding domain AQ16_2106 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AQ16_2106 PF02743 Cache domain AQ16_2106 PF00672 HAMP domain AQ16_2107 PF00005 ABC transporter AQ16_2108 PF00497 Bacterial extracellular solute-binding proteins, family 3 AQ16_2109 PF00528 Binding-protein-dependent transport system inner membrane component AQ16_211 PF16291 Domain of unknown function (DUF4937 AQ16_2111 PF00355 Rieske [2Fe-2S] domain AQ16_2111 PF01266 FAD dependent oxidoreductase AQ16_2112 PF07690 Major Facilitator Superfamily AQ16_2113 PF10127 RNA repair pathway DNA polymerase beta family AQ16_2117 PF01609 Transposase DDE domain AQ16_2123 PF12728 Helix-turn-helix domain AQ16_2125 PF07992 Pyridine nucleotide-disulphide oxidoreductase AQ16_2126 PF01497 Periplasmic binding protein AQ16_2127 PF01032 FecCD transport family AQ16_2128 PF01032 FecCD transport family AQ16_2129 PF00596 Class II Aldolase and Adducin N-terminal domain AQ16_2131 PF01636 Phosphotransferase enzyme family AQ16_2132 PF00578 AhpC/TSA family AQ16_2133 PF13192 Thioredoxin domain AQ16_2133 PF07992 Pyridine nucleotide-disulphide oxidoreductase AQ16_2135 PF07687 Peptidase dimerisation domain AQ16_2135 PF01546 Peptidase family M20/M25/M40 AQ16_2138 PF13378 Enolase C-terminal domain-like AQ16_2138 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AQ16_214 PF01235 Sodium:alanine symporter family AQ16_2141 PF07308 Protein of unknown function (DUF1456) AQ16_2142 PF13426 PAS domain AQ16_2142 PF13188 PAS domain AQ16_2142 PF00989 PAS fold AQ16_2142 PF00512 His Kinase A (phospho-acceptor) domain AQ16_2142 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ16_2143 PF01207 Dihydrouridine synthase (Dus) AQ16_2144 PF02475 Met-10+ like-protein AQ16_2144 PF05958 tRNA (Uracil-5-)-methyltransferase AQ16_2144 PF01938 TRAM domain AQ16_2145 PF07662 Na+ dependent nucleoside transporter C-terminus AQ16_2145 PF01773 Na+ dependent nucleoside transporter N-terminus AQ16_2145 PF07670 Nucleoside recognition AQ16_2148 PF02073 Thermophilic metalloprotease (M29) AQ16_2149 PF00893 Small Multidrug Resistance protein AQ16_215 PF00082 Subtilase family AQ16_2150 PF00171 Aldehyde dehydrogenase family AQ16_2151 PF00158 Sigma-54 interaction domain AQ16_2152 PF00202 Aminotransferase class-III AQ16_2154 PF13419 Haloacid dehalogenase-like hydrolase AQ16_2155 PF00781 Diacylglycerol kinase catalytic domain AQ16_2156 PF02637 GatB domain AQ16_2156 PF02934 GatB/GatE catalytic domain AQ16_2157 PF01425 Amidase AQ16_2158 PF02686 Glu-tRNAGln amidotransferase C subunit AQ16_2159 PF05360 yiaA/B two helix domain AQ16_216 PF05163 DinB family AQ16_2160 PF01047 MarR family AQ16_2161 PF17886 HSP20-like domain found in ArsA AQ16_2161 PF02374 Anion-transporting ATPase AQ16_2164 PF03180 NLPA lipoprotein AQ16_2165 PF00528 Binding-protein-dependent transport system inner membrane component AQ16_2166 PF09383 NIL domain AQ16_2166 PF00005 ABC transporter AQ16_2167 PF00857 Isochorismatase family AQ16_2169 PF00171 Aldehyde dehydrogenase family AQ16_2170 PF01925 Sulfite exporter TauE/SafE AQ16_2171 PF07537 CamS sex pheromone cAM373 precursor AQ16_2172 PF00533 BRCA1 C Terminus (BRCT) domain AQ16_2172 PF01653 NAD-dependent DNA ligase adenylation domain AQ16_2172 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AQ16_2172 PF03120 NAD-dependent DNA ligase OB-fold domain AQ16_2172 PF12826 Helix-hairpin-helix motif AQ16_2173 PF00580 UvrD/REP helicase N-terminal domain AQ16_2173 PF13361 UvrD-like helicase C-terminal domain AQ16_2174 PF01884 PcrB family AQ16_2178 PF02843 Phosphoribosylglycinamide synthetase, C domain AQ16_2178 PF02844 Phosphoribosylglycinamide synthetase, N domain AQ16_2178 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AQ16_2179 PF01808 AICARFT/IMPCHase bienzyme AQ16_2179 PF02142 MGS-like domain AQ16_218 PF00216 Bacterial DNA-binding protein AQ16_2180 PF00551 Formyl transferase AQ16_2181 PF00586 AIR synthase related protein, N-terminal domain AQ16_2181 PF02769 AIR synthase related protein, C-terminal domain AQ16_2182 PF00156 Phosphoribosyl transferase domain AQ16_2183 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AQ16_2183 PF02769 AIR synthase related protein, C-terminal domain AQ16_2183 PF00586 AIR synthase related protein, N-terminal domain AQ16_2185 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase AQ16_2186 PF01259 SAICAR synthetase AQ16_2187 PF10397 Adenylosuccinate lyase C-terminus AQ16_2187 PF00206 Lyase AQ16_2188 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain AQ16_2188 PF02222 ATP-grasp domain AQ16_2189 PF00731 AIR carboxylase AQ16_2194 PF01619 Proline dehydrogenase AQ16_2195 PF00155 Aminotransferase class I and II AQ16_2195 PF00392 Bacterial regulatory proteins, gntR family AQ16_2200 PF00535 Glycosyl transferase family 2 AQ16_2204 PF08241 Methyltransferase domain AQ16_221 PF07690 Major Facilitator Superfamily AQ16_2212 PF01323 DSBA-like thioredoxin domain AQ16_2218 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ16_2218 PF00989 PAS fold AQ16_2218 PF00512 His Kinase A (phospho-acceptor) domain AQ16_2218 PF16736 Single Cache-like AQ16_2219 PF00072 Response regulator receiver domain AQ16_2219 PF00486 Transcriptional regulatory protein, C terminal AQ16_222 PF03621 MbtH-like protein AQ16_2220 PF00860 Permease family AQ16_2221 PF00117 Glutamine amidotransferase class-I AQ16_2221 PF00958 GMP synthase C terminal domain AQ16_2221 PF02540 NAD synthase AQ16_2222 PF00118 TCP-1/cpn60 chaperonin family AQ16_2223 PF00166 Chaperonin 10 Kd subunit AQ16_2224 PF02517 CPBP intramembrane metalloprotease AQ16_2226 PF06971 Putative DNA-binding protein N-terminus AQ16_2226 PF02629 CoA binding domain AQ16_2227 PF16326 ABC transporter C-terminal domain AQ16_2227 PF00005 ABC transporter AQ16_2227 PF12848 ABC transporter AQ16_2228 PF00814 Glycoprotease family AQ16_2229 PF00583 Acetyltransferase (GNAT) family AQ16_223 PF00550 Phosphopantetheine attachment site AQ16_223 PF00501 AMP-binding enzyme AQ16_223 PF13193 AMP-binding enzyme C-terminal domain AQ16_223 PF00668 Condensation domain AQ16_223 PF00975 Thioesterase domain AQ16_2230 PF00814 Glycoprotease family AQ16_2231 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE AQ16_224 PF00550 Phosphopantetheine attachment site AQ16_224 PF00857 Isochorismatase family AQ16_2249 PF17283 SprT-like zinc ribbon domain AQ16_2249 PF10263 SprT-like family AQ16_225 PF00501 AMP-binding enzyme AQ16_225 PF13193 AMP-binding enzyme C-terminal domain AQ16_2250 PF17674 HHH domain AQ16_2250 PF00575 S1 RNA binding domain AQ16_2250 PF09371 Tex-like protein N-terminal domain AQ16_2250 PF16921 Tex protein YqgF-like domain AQ16_2251 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system AQ16_2252 PF01402 Ribbon-helix-helix protein, copG family AQ16_2253 PF01168 Alanine racemase, N-terminal domain AQ16_2253 PF00842 Alanine racemase, C-terminal domain AQ16_2255 PF01648 4'-phosphopantetheinyl transferase superfamily AQ16_2256 PF03851 UV-endonuclease UvdE AQ16_2257 PF01694 Rhomboid family AQ16_2258 PF00271 Helicase conserved C-terminal domain AQ16_2258 PF00270 DEAD/DEAH box helicase AQ16_2259 PF01225 Mur ligase family, catalytic domain AQ16_2259 PF08245 Mur ligase middle domain AQ16_2259 PF02875 Mur ligase family, glutamate ligase domain AQ16_226 PF00425 chorismate binding enzyme AQ16_2260 PF01820 D-ala D-ala ligase N-terminus AQ16_2260 PF07478 D-ala D-ala ligase C-terminus AQ16_2261 PF07690 Major Facilitator Superfamily AQ16_2262 PF13520 Amino acid permease AQ16_2264 PF01557 Fumarylacetoacetate (FAA) hydrolase family AQ16_2265 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AQ16_227 PF00106 short chain dehydrogenase AQ16_2272 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AQ16_2272 PF00005 ABC transporter AQ16_2273 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AQ16_2273 PF00005 ABC transporter AQ16_2275 PF00528 Binding-protein-dependent transport system inner membrane component AQ16_2276 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AQ16_2277 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AQ16_228 PF07690 Major Facilitator Superfamily AQ16_2281 PF00005 ABC transporter AQ16_2282 PF00196 Bacterial regulatory proteins, luxR family AQ16_2282 PF00072 Response regulator receiver domain AQ16_2283 PF07730 Histidine kinase AQ16_2284 PF00005 ABC transporter AQ16_2284 PF16326 ABC transporter C-terminal domain AQ16_2284 PF12848 ABC transporter AQ16_2287 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) AQ16_2290 PF01026 TatD related DNase AQ16_2293 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 AQ16_2293 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AQ16_2295 PF00356 Bacterial regulatory proteins, lacI family AQ16_2295 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AQ16_2297 PF01553 Acyltransferase AQ16_2298 PF14142 YrzO-like protein AQ16_2299 PF00892 EamA-like transporter family AQ16_23 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ16_230 PF01022 Bacterial regulatory protein, arsR family AQ16_2300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AQ16_2300 PF03466 LysR substrate binding domain AQ16_2302 PF12728 Helix-turn-helix domain AQ16_2302 PF12727 PBP superfamily domain AQ16_2304 PF00528 Binding-protein-dependent transport system inner membrane component AQ16_2305 PF06800 Sugar transport protein AQ16_2306 PF04973 Nicotinamide mononucleotide transporter AQ16_2307 PF03807 NADP oxidoreductase coenzyme F420-dependent AQ16_2307 PF14748 Pyrroline-5-carboxylate reductase dimerisation AQ16_2308 PF00248 Aldo/keto reductase family AQ16_2309 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AQ16_2310 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AQ16_2312 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AQ16_2313 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AQ16_2313 PF00005 ABC transporter AQ16_2314 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AQ16_2314 PF00005 ABC transporter AQ16_2315 PF12911 N-terminal TM domain of oligopeptide transport permease C AQ16_2315 PF00528 Binding-protein-dependent transport system inner membrane component AQ16_2316 PF00528 Binding-protein-dependent transport system inner membrane component AQ16_232 PF13476 AAA domain AQ16_2320 PF07690 Major Facilitator Superfamily AQ16_2323 PF07690 Major Facilitator Superfamily AQ16_2324 PF01565 FAD binding domain AQ16_233 PF12320 Type 5 capsule protein repressor C-terminal domain AQ16_233 PF00149 Calcineurin-like phosphoesterase AQ16_2333 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region AQ16_2333 PF00326 Prolyl oligopeptidase family AQ16_2334 PF01380 SIS domain AQ16_2335 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AQ16_2335 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AQ16_2335 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AQ16_2335 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AQ16_2336 PF07949 YbbR-like protein AQ16_2337 PF02457 DisA bacterial checkpoint controller nucleotide-binding AQ16_2338 PF00491 Arginase family AQ16_2339 PF02595 Glycerate kinase family AQ16_234 PF10763 Protein of unknown function (DUF2584) AQ16_2354 PF01522 Polysaccharide deacetylase AQ16_2355 PF14089 KinB-signalling pathway activation in sporulation AQ16_2356 PF17898 Spore germination GerD central core domain AQ16_2357 PF10609 NUBPL iron-transfer P-loop NTPase AQ16_2358 PF01520 N-acetylmuramoyl-L-alanine amidase AQ16_236 PF00378 Enoyl-CoA hydratase/isomerase AQ16_2360 PF00380 Ribosomal protein S9/S16 AQ16_2361 PF00572 Ribosomal protein L13 AQ16_2362 PF01416 tRNA pseudouridine synthase AQ16_2363 PF02361 Cobalt transport protein AQ16_2364 PF00005 ABC transporter AQ16_2365 PF00005 ABC transporter AQ16_2366 PF01196 Ribosomal protein L17 AQ16_2367 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AQ16_2367 PF01000 RNA polymerase Rpb3/RpoA insert domain AQ16_2367 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AQ16_2368 PF00411 Ribosomal protein S11 AQ16_2369 PF00416 Ribosomal protein S13/S18 AQ16_237 PF01810 LysE type translocator AQ16_2370 PF00444 Ribosomal protein L36 AQ16_2371 PF01176 Translation initiation factor 1A / IF-1 AQ16_2372 PF00557 Metallopeptidase family M24 AQ16_2373 PF05191 Adenylate kinase, active site lid AQ16_2374 PF00344 SecY translocase AQ16_2375 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AQ16_2376 PF00327 Ribosomal protein L30p/L7e AQ16_2377 PF00333 Ribosomal protein S5, N-terminal domain AQ16_2377 PF03719 Ribosomal protein S5, C-terminal domain AQ16_2378 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AQ16_2379 PF00347 Ribosomal protein L6 AQ16_238 PF00171 Aldehyde dehydrogenase family AQ16_2380 PF00410 Ribosomal protein S8 AQ16_2381 PF00253 Ribosomal protein S14p/S29e AQ16_2382 PF00673 ribosomal L5P family C-terminus AQ16_2382 PF00281 Ribosomal protein L5 AQ16_2383 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AQ16_2383 PF00467 KOW motif AQ16_2384 PF00238 Ribosomal protein L14p/L23e AQ16_2385 PF00366 Ribosomal protein S17 AQ16_2386 PF00831 Ribosomal L29 protein AQ16_2387 PF00252 Ribosomal protein L16p/L10e AQ16_2388 PF00189 Ribosomal protein S3, C-terminal domain AQ16_2388 PF07650 KH domain AQ16_2389 PF00237 Ribosomal protein L22p/L17e AQ16_239 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AQ16_239 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AQ16_2390 PF00203 Ribosomal protein S19 AQ16_2391 PF00181 Ribosomal Proteins L2, RNA binding domain AQ16_2391 PF03947 Ribosomal Proteins L2, C-terminal domain AQ16_2392 PF00276 Ribosomal protein L23 AQ16_2393 PF00573 Ribosomal protein L4/L1 family AQ16_2394 PF00297 Ribosomal protein L3 AQ16_2395 PF00338 Ribosomal protein S10p/S20e AQ16_2396 PF00009 Elongation factor Tu GTP binding domain AQ16_2396 PF03144 Elongation factor Tu domain 2 AQ16_2396 PF03143 Elongation factor Tu C-terminal domain AQ16_2397 PF14492 Elongation Factor G, domain II AQ16_2397 PF03764 Elongation factor G, domain IV AQ16_2397 PF00679 Elongation factor G C-terminus AQ16_2397 PF00009 Elongation factor Tu GTP binding domain AQ16_2397 PF03144 Elongation factor Tu domain 2 AQ16_2398 PF00177 Ribosomal protein S7p/S5e AQ16_2399 PF00164 Ribosomal protein S12/S23 AQ16_24 PF00072 Response regulator receiver domain AQ16_24 PF00486 Transcriptional regulatory protein, C terminal AQ16_240 PF02770 Acyl-CoA dehydrogenase, middle domain AQ16_240 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AQ16_240 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AQ16_2400 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family AQ16_2401 PF04997 RNA polymerase Rpb1, domain 1 AQ16_2401 PF04998 RNA polymerase Rpb1, domain 5 AQ16_2401 PF05000 RNA polymerase Rpb1, domain 4 AQ16_2401 PF04983 RNA polymerase Rpb1, domain 3 AQ16_2401 PF00623 RNA polymerase Rpb1, domain 2 AQ16_2402 PF04563 RNA polymerase beta subunit AQ16_2402 PF10385 RNA polymerase beta subunit external 1 domain AQ16_2402 PF04565 RNA polymerase Rpb2, domain 3 AQ16_2402 PF04561 RNA polymerase Rpb2, domain 2 AQ16_2402 PF00562 RNA polymerase Rpb2, domain 6 AQ16_2402 PF04560 RNA polymerase Rpb2, domain 7 AQ16_2403 PF05175 Methyltransferase small domain AQ16_2404 PF00542 Ribosomal protein L7/L12 C-terminal domain AQ16_2404 PF16320 Ribosomal protein L7/L12 dimerisation domain AQ16_2405 PF00466 Ribosomal protein L10 AQ16_2406 PF00687 Ribosomal protein L1p/L10e family AQ16_2407 PF03946 Ribosomal protein L11, N-terminal domain AQ16_2407 PF00298 Ribosomal protein L11, RNA binding domain AQ16_2408 PF02357 Transcription termination factor nusG AQ16_2408 PF00467 KOW motif AQ16_2409 PF00584 SecE/Sec61-gamma subunits of protein translocation complex AQ16_2410 PF04542 Sigma-70 region 2 AQ16_2410 PF08281 Sigma-70, region 4 AQ16_2411 PF05991 YacP-like NYN domain AQ16_2412 PF08032 RNA 2'-O ribose methyltransferase substrate binding AQ16_2412 PF00588 SpoU rRNA Methylase family AQ16_2413 PF00636 Ribonuclease III domain AQ16_2414 PF01406 tRNA synthetases class I (C) catalytic domain AQ16_2414 PF09190 DALR domain AQ16_2415 PF06426 Serine acetyltransferase, N-terminal AQ16_2415 PF00132 Bacterial transferase hexapeptide (six repeats) AQ16_2416 PF00749 tRNA synthetases class I (E and Q), catalytic domain AQ16_2417 PF02542 YgbB family AQ16_2418 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AQ16_242 PF03972 MmgE/PrpD family AQ16_2420 PF02457 DisA bacterial checkpoint controller nucleotide-binding AQ16_2420 PF10635 DisA bacterial checkpoint controller linker region AQ16_2421 PF18073 Rubredoxin metal binding domain AQ16_2422 PF02861 Clp amino terminal domain, pathogenicity island component AQ16_2422 PF07724 AAA domain (Cdc48 subfamily) AQ16_2422 PF10431 C-terminal, D2-small domain, of ClpB protein AQ16_2422 PF00004 ATPase family associated with various cellular activities (AAA) AQ16_2422 PF17871 AAA lid domain AQ16_2423 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain AQ16_2424 PF02151 UvrB/uvrC motif AQ16_2425 PF17727 CtsR C-terminal dimerization domain AQ16_2425 PF05848 CtsR N-terminal HTH domain AQ16_243 PF00285 Citrate synthase, C-terminal domain AQ16_244 PF01521 Iron-sulphur cluster biosynthesis AQ16_2443 PF00152 tRNA synthetases class II (D, K and N) AQ16_2443 PF01336 OB-fold nucleic acid binding domain AQ16_2444 PF01207 Dihydrouridine synthase (Dus) AQ16_2445 PF01381 Helix-turn-helix AQ16_2446 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AQ16_2447 PF02152 Dihydroneopterin aldolase AQ16_2448 PF00809 Pterin binding enzyme AQ16_2449 PF01063 Amino-transferase class IV AQ16_245 PF07690 Major Facilitator Superfamily AQ16_2450 PF00117 Glutamine amidotransferase class-I AQ16_2451 PF04715 Anthranilate synthase component I, N terminal region AQ16_2451 PF00425 chorismate binding enzyme AQ16_2452 PF00291 Pyridoxal-phosphate dependent enzyme AQ16_2453 PF01430 Hsp33 protein AQ16_2454 PF03309 Type III pantothenate kinase AQ16_2455 PF00004 ATPase family associated with various cellular activities (AAA) AQ16_2455 PF06480 FtsH Extracellular AQ16_2455 PF17862 AAA+ lid domain AQ16_2455 PF01434 Peptidase family M41 AQ16_2457 PF11734 TilS substrate C-terminal domain AQ16_2457 PF09179 TilS substrate binding domain AQ16_2457 PF01171 PP-loop family AQ16_2458 PF07228 Stage II sporulation protein E (SpoIIE) AQ16_2461 PF00575 S1 RNA binding domain AQ16_2463 PF09578 Spore cortex protein YabQ (Spore_YabQ) AQ16_2464 PF07873 YabP family AQ16_2465 PF01479 S4 domain AQ16_2466 PF03819 MazG nucleotide pyrophosphohydrolase domain AQ16_2466 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AQ16_2467 PF01943 Polysaccharide biosynthesis protein AQ16_2467 PF14667 Polysaccharide biosynthesis C-terminal domain AQ16_2468 PF15714 Stage V sporulation protein T C-terminal, transcription factor AQ16_2468 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin AQ16_2469 PF03461 TRCF domain AQ16_2469 PF02559 CarD-like/TRCF domain AQ16_2469 PF00270 DEAD/DEAH box helicase AQ16_2469 PF00271 Helicase conserved C-terminal domain AQ16_2469 PF17757 UvrB interaction domain AQ16_247 PF00905 Penicillin binding protein transpeptidase domain AQ16_247 PF00912 Transglycosylase AQ16_2471 PF01195 Peptidyl-tRNA hydrolase AQ16_2472 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AQ16_2472 PF14572 Phosphoribosyl synthetase-associated domain AQ16_2473 PF00483 Nucleotidyl transferase AQ16_2473 PF00132 Bacterial transferase hexapeptide (six repeats) AQ16_2474 PF04026 SpoVG AQ16_2475 PF01042 Endoribonuclease L-PSP AQ16_2476 PF09182 Bacterial purine repressor, N-terminal AQ16_2476 PF00156 Phosphoribosyl transferase domain AQ16_2477 PF08544 GHMP kinases C terminal AQ16_2477 PF00288 GHMP kinases N terminal domain AQ16_2478 PF00269 Small, acid-soluble spore proteins, alpha/beta type AQ16_2479 PF06257 Biofilm formation stimulator VEG AQ16_2480 PF05582 YabG peptidase U57 AQ16_2481 PF00398 Ribosomal RNA adenine dimethylase AQ16_2482 PF13331 Domain of unknown function (DUF4093) AQ16_2482 PF13662 Toprim domain AQ16_2483 PF01026 TatD related DNase AQ16_2484 PF08264 Anticodon-binding domain of tRNA AQ16_2484 PF01588 Putative tRNA binding domain AQ16_2484 PF09334 tRNA synthetases class I (M) AQ16_2485 PF18277 AbrB C-terminal domain AQ16_2485 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin AQ16_2486 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AQ16_2487 PF01541 GIY-YIG catalytic domain AQ16_2488 PF05175 Methyltransferase small domain AQ16_2489 PF06156 Initiation control protein YabA AQ16_2490 PF04468 PSP1 C-terminal conserved region AQ16_2491 PF09115 DNA polymerase III, delta subunit, C terminal AQ16_2492 PF02223 Thymidylate kinase AQ16_2493 PF01276 Orn/Lys/Arg decarboxylase, major domain AQ16_2493 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain AQ16_25 PF03069 Acetamidase/Formamidase family AQ16_2501 PF07441 SigmaK-factor processing regulatory protein BofA AQ16_2502 PF10704 Protein of unknown function (DUF2508) AQ16_2503 PF02132 RecR protein AQ16_2503 PF13662 Toprim domain AQ16_2504 PF02575 YbaB/EbfC DNA-binding family AQ16_2505 PF12169 DNA polymerase III subunits gamma and tau domain III AQ16_2506 PF14437 MafB19-like deaminase AQ16_2507 PF00857 Isochorismatase family AQ16_2508 PF01712 Deoxynucleoside kinase AQ16_2509 PF01712 Deoxynucleoside kinase AQ16_2512 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AQ16_2512 PF02403 Seryl-tRNA synthetase N-terminal domain AQ16_2513 PF01174 SNO glutamine amidotransferase family AQ16_2514 PF01680 SOR/SNZ family AQ16_2515 PF07943 Penicillin-binding protein 5, C-terminal domain AQ16_2515 PF00768 D-alanyl-D-alanine carboxypeptidase AQ16_2516 PF00571 CBS domain AQ16_2516 PF00478 IMP dehydrogenase / GMP reductase domain AQ16_2517 PF14175 YaaC-like Protein AQ16_2525 PF00521 DNA gyrase/topoisomerase IV, subunit A AQ16_2525 PF03989 DNA gyrase C-terminal domain, beta-propeller AQ16_2526 PF00204 DNA gyrase B AQ16_2526 PF01751 Toprim domain AQ16_2526 PF00986 DNA gyrase B subunit, carboxyl terminus AQ16_2526 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ16_2527 PF02463 RecF/RecN/SMC N terminal domain AQ16_2529 PF00712 DNA polymerase III beta subunit, N-terminal domain AQ16_2529 PF02768 DNA polymerase III beta subunit, C-terminal domain AQ16_2529 PF02767 DNA polymerase III beta subunit, central domain AQ16_2530 PF08299 Bacterial dnaA protein helix-turn-helix AQ16_2530 PF00308 Bacterial dnaA protein AQ16_2530 PF11638 DnaA N-terminal domain AQ16_2531 PF00468 Ribosomal protein L34 AQ16_2532 PF00825 Ribonuclease P AQ16_2533 PF02096 60Kd inner membrane protein AQ16_2534 PF14804 Jag N-terminus AQ16_2534 PF01424 R3H domain AQ16_2535 PF12631 MnmE helical domain AQ16_2535 PF10396 GTP-binding protein TrmE N-terminus AQ16_2535 PF01926 50S ribosome-binding GTPase AQ16_2536 PF13932 GidA associated domain AQ16_2536 PF01134 Glucose inhibited division protein A AQ16_2537 PF02527 rRNA small subunit methyltransferase G AQ16_2538 PF02195 ParB-like nuclease domain AQ16_2538 PF17762 HTH domain found in ParB protein AQ16_2539 PF13614 AAA domain AQ16_254 PF10676 Spore germination protein gerPA/gerPF AQ16_2540 PF02195 ParB-like nuclease domain AQ16_2540 PF17762 HTH domain found in ParB protein AQ16_2541 PF06866 Protein of unknown function (DUF1256) AQ16_2542 PF00924 Mechanosensitive ion channel AQ16_2543 PF06107 Bacterial protein of unknown function (DUF951) AQ16_2544 PF06071 Protein of unknown function (DUF933) AQ16_2544 PF01926 50S ribosome-binding GTPase AQ16_2545 PF01250 Ribosomal protein S6 AQ16_2546 PF00436 Single-strand binding protein family AQ16_2547 PF01084 Ribosomal protein S18 AQ16_2548 PF09991 Predicted membrane protein (DUF2232) AQ16_2549 PF02272 DHHA1 domain AQ16_2549 PF01368 DHH family AQ16_2550 PF03948 Ribosomal protein L9, C-terminal domain AQ16_2550 PF01281 Ribosomal protein L9, N-terminal domain AQ16_2551 PF03796 DnaB-like helicase C terminal domain AQ16_2551 PF00772 DnaB-like helicase N terminal domain AQ16_2552 PF00709 Adenylosuccinate synthetase AQ16_2557 PF00072 Response regulator receiver domain AQ16_2557 PF00486 Transcriptional regulatory protein, C terminal AQ16_2558 PF00512 His Kinase A (phospho-acceptor) domain AQ16_2558 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ16_2558 PF00672 HAMP domain AQ16_2558 PF13426 PAS domain AQ16_2559 PF07435 YycH protein AQ16_2560 PF09648 YycH protein AQ16_2561 PF00753 Metallo-beta-lactamase superfamily AQ16_2562 PF13180 PDZ domain AQ16_2564 PF02590 Predicted SPOUT methyltransferase AQ16_2567 PF01432 Peptidase family M3 AQ16_2567 PF08439 Oligopeptidase F AQ16_2568 PF00478 IMP dehydrogenase / GMP reductase domain AQ16_2570 PF00271 Helicase conserved C-terminal domain AQ16_2570 PF00270 DEAD/DEAH box helicase AQ16_2570 PF03880 DbpA RNA binding domain AQ16_2572 PF03006 Haemolysin-III related AQ16_2573 PF16363 GDP-mannose 4,6 dehydratase AQ16_2575 PF02293 AmiS/UreI family transporter AQ16_2577 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AQ16_2577 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AQ16_2578 PF02898 Nitric oxide synthase, oxygenase domain AQ16_2579 PF02028 BCCT, betaine/carnitine/choline family transporter AQ16_2580 PF07690 Major Facilitator Superfamily AQ16_2581 PF13492 GAF domain AQ16_2581 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ16_2581 PF07694 5TMR of 5TMR-LYT AQ16_2581 PF06580 Histidine kinase AQ16_2582 PF00072 Response regulator receiver domain AQ16_2582 PF04397 LytTr DNA-binding domain AQ16_2583 PF03788 LrgA family AQ16_2584 PF04172 LrgB-like family AQ16_2585 PF01594 AI-2E family transporter AQ16_2586 PF01625 Peptide methionine sulfoxide reductase AQ16_2586 PF01641 SelR domain AQ16_2587 PF00873 AcrB/AcrD/AcrF family AQ16_2588 PF00440 Bacterial regulatory proteins, tetR family AQ16_2589 PF00535 Glycosyl transferase family 2 AQ16_2593 PF12848 ABC transporter AQ16_2593 PF00005 ABC transporter AQ16_2594 PF00535 Glycosyl transferase family 2 AQ16_2596 PF03061 Thioesterase superfamily AQ16_2598 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AQ16_2599 PF03458 UPF0126 domain AQ16_26 PF07486 Cell Wall Hydrolase AQ16_2602 PF03808 Glycosyl transferase WecB/TagA/CpsF family AQ16_2603 PF07690 Major Facilitator Superfamily AQ16_2604 PF00072 Response regulator receiver domain AQ16_2604 PF04397 LytTr DNA-binding domain AQ16_2605 PF02554 Carbon starvation protein CstA AQ16_2605 PF13722 5TM C-terminal transporter carbon starvation CstA AQ16_2606 PF04328 Selenoprotein, putative AQ16_2607 PF07694 5TMR of 5TMR-LYT AQ16_2607 PF00990 Diguanylate cyclase, GGDEF domain AQ16_2608 PF08543 Phosphomethylpyrimidine kinase AQ16_2609 PF07730 Histidine kinase AQ16_2609 PF13185 GAF domain AQ16_2610 PF00196 Bacterial regulatory proteins, luxR family AQ16_2610 PF00072 Response regulator receiver domain AQ16_2611 PF02525 Flavodoxin-like fold AQ16_2612 PF00027 Cyclic nucleotide-binding domain AQ16_2613 PF13419 Haloacid dehalogenase-like hydrolase AQ16_2615 PF01053 Cys/Met metabolism PLP-dependent enzyme AQ16_2616 PF04204 Homoserine O-succinyltransferase AQ16_2617 PF03447 Homoserine dehydrogenase, NAD binding domain AQ16_2617 PF01842 ACT domain AQ16_2617 PF00742 Homoserine dehydrogenase AQ16_2619 PF00356 Bacterial regulatory proteins, lacI family AQ16_2619 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AQ16_2620 PF13472 GDSL-like Lipase/Acylhydrolase family AQ16_2621 PF00005 ABC transporter AQ16_2622 PF12679 ABC-2 family transporter protein AQ16_2623 PF03167 Uracil DNA glycosylase superfamily AQ16_2624 PF12823 Domain of unknown function (DUF3817) AQ16_2626 PF00860 Permease family AQ16_2627 PF07885 Ion channel AQ16_2627 PF02254 TrkA-N domain AQ16_2629 PF04241 Protein of unknown function (DUF423) AQ16_2630 PF09671 Spore coat protein (Spore_GerQ) AQ16_2631 PF07486 Cell Wall Hydrolase AQ16_2632 PF00768 D-alanyl-D-alanine carboxypeptidase AQ16_2632 PF07943 Penicillin-binding protein 5, C-terminal domain AQ16_2634 PF01515 Phosphate acetyl/butaryl transferase AQ16_2635 PF03099 Biotin/lipoate A/B protein ligase family AQ16_2637 PF07293 Protein of unknown function (DUF1450) AQ16_2638 PF01032 FecCD transport family AQ16_2639 PF01032 FecCD transport family AQ16_264 PF08281 Sigma-70, region 4 AQ16_264 PF04542 Sigma-70 region 2 AQ16_2640 PF00005 ABC transporter AQ16_2641 PF01497 Periplasmic binding protein AQ16_2642 PF01966 HD domain AQ16_2643 PF01361 Tautomerase enzyme AQ16_2644 PF02163 Peptidase family M50 AQ16_2645 PF08741 YwhD family AQ16_2646 PF00905 Penicillin binding protein transpeptidase domain AQ16_2646 PF00912 Transglycosylase AQ16_2647 PF03009 Glycerophosphoryl diester phosphodiesterase family AQ16_2648 PF13411 MerR HTH family regulatory protein AQ16_2649 PF07690 Major Facilitator Superfamily AQ16_2650 PF17284 Spermidine synthase tetramerisation domain AQ16_2651 PF00491 Arginase family AQ16_2654 PF17676 LD-carboxypeptidase C-terminal domain AQ16_2654 PF02016 LD-carboxypeptidase N-terminal domain AQ16_2655 PF09148 Domain of unknown function (DUF1934) AQ16_2656 PF03485 Arginyl tRNA synthetase N terminal domain AQ16_2656 PF05746 DALR anticodon binding domain AQ16_2656 PF00750 tRNA synthetases class I (R) AQ16_2657 PF04542 Sigma-70 region 2 AQ16_2657 PF08281 Sigma-70, region 4 AQ16_2661 PF05738 Cna protein B-type domain AQ16_2661 PF17802 Prealbumin-like fold domain AQ16_2661 PF05737 Collagen binding domain AQ16_2662 PF02225 PA domain AQ16_2662 PF04389 Peptidase family M28 AQ16_2663 PF00557 Metallopeptidase family M24 AQ16_2664 PF00005 ABC transporter AQ16_2666 PF07730 Histidine kinase AQ16_2666 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ16_2667 PF00196 Bacterial regulatory proteins, luxR family AQ16_2667 PF00072 Response regulator receiver domain AQ16_2671 PF00990 Diguanylate cyclase, GGDEF domain AQ16_2671 PF03707 Bacterial signalling protein N terminal repeat AQ16_2671 PF00563 EAL domain AQ16_2672 PF03851 UV-endonuclease UvdE AQ16_2673 PF13091 PLD-like domain AQ16_2674 PF02754 Cysteine-rich domain AQ16_2674 PF13183 4Fe-4S dicluster domain AQ16_2675 PF02803 Thiolase, C-terminal domain AQ16_2675 PF00108 Thiolase, N-terminal domain AQ16_2676 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AQ16_2676 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AQ16_2677 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AQ16_2677 PF02770 Acyl-CoA dehydrogenase, middle domain AQ16_2677 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AQ16_2678 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AQ16_2678 PF02770 Acyl-CoA dehydrogenase, middle domain AQ16_2678 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AQ16_2680 PF05066 HB1, ASXL, restriction endonuclease HTH domain AQ16_2681 PF00117 Glutamine amidotransferase class-I AQ16_2681 PF06418 CTP synthase N-terminus AQ16_2682 PF10740 Domain of unknown function (DUF2529) AQ16_2683 PF00072 Response regulator receiver domain AQ16_2684 PF01116 Fructose-bisphosphate aldolase class-II AQ16_2685 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AQ16_2686 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded AQ16_2687 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AQ16_2687 PF07497 Rho termination factor, RNA-binding domain AQ16_2687 PF07498 Rho termination factor, N-terminal domain AQ16_2688 PF01197 Ribosomal protein L31 AQ16_2689 PF00265 Thymidine kinase AQ16_2690 PF03462 PCRF domain AQ16_2690 PF00472 RF-1 domain AQ16_2691 PF13847 Methyltransferase domain AQ16_2691 PF17827 PrmC N-terminal domain AQ16_2692 PF09551 Stage II sporulation protein R (spore_II_R) AQ16_2694 PF03481 Putative GTP-binding controlling metal-binding AQ16_2694 PF01300 Telomere recombination AQ16_2695 PF02659 Putative manganese efflux pump AQ16_2698 PF01613 Flavin reductase like domain AQ16_2699 PF07681 DoxX AQ16_27 PF01921 tRNA synthetases class I (K) AQ16_2700 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AQ16_2701 PF01451 Low molecular weight phosphotyrosine protein phosphatase AQ16_2702 PF02502 Ribose/Galactose Isomerase AQ16_2703 PF04260 Protein of unknown function (DUF436) AQ16_2704 PF00464 Serine hydroxymethyltransferase AQ16_2707 PF03899 ATP synthase I chain AQ16_2708 PF00119 ATP synthase A chain AQ16_2709 PF00137 ATP synthase subunit C AQ16_2710 PF00430 ATP synthase B/B' CF(0) AQ16_2711 PF00213 ATP synthase delta (OSCP) subunit AQ16_2712 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AQ16_2712 PF00306 ATP synthase alpha/beta chain, C terminal domain AQ16_2712 PF02874 ATP synthase alpha/beta family, beta-barrel domain AQ16_2713 PF00231 ATP synthase AQ16_2714 PF02874 ATP synthase alpha/beta family, beta-barrel domain AQ16_2714 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AQ16_2715 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain AQ16_2715 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AQ16_2718 PF00990 Diguanylate cyclase, GGDEF domain AQ16_2718 PF00563 EAL domain AQ16_2718 PF03707 Bacterial signalling protein N terminal repeat AQ16_2719 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AQ16_2720 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AQ16_2721 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AQ16_2722 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AQ16_2723 PF00146 NADH dehydrogenase AQ16_2725 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 AQ16_2726 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AQ16_2727 PF00361 Proton-conducting membrane transporter AQ16_2727 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AQ16_2727 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus AQ16_2728 PF00361 Proton-conducting membrane transporter AQ16_2729 PF00361 Proton-conducting membrane transporter AQ16_273 PF00085 Thioredoxin AQ16_2730 PF06612 Protein of unknown function (DUF1146) AQ16_2732 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AQ16_2733 PF08486 Stage II sporulation protein AQ16_2734 PF00501 AMP-binding enzyme AQ16_2734 PF13193 AMP-binding enzyme C-terminal domain AQ16_2735 PF00072 Response regulator receiver domain AQ16_2735 PF04397 LytTr DNA-binding domain AQ16_2736 PF00005 ABC transporter AQ16_2738 PF01551 Peptidase family M23 AQ16_2739 PF14883 Hypothetical glycosyl hydrolase family 13 AQ16_2739 PF01522 Polysaccharide deacetylase AQ16_274 PF01569 PAP2 superfamily AQ16_2740 PF12116 Stage III sporulation protein D AQ16_2742 PF01467 Cytidylyltransferase-like AQ16_2743 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase AQ16_2744 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase AQ16_2744 PF00535 Glycosyl transferase family 2 AQ16_2745 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase AQ16_2746 PF01061 ABC-2 type transporter AQ16_2747 PF08239 Bacterial SH3 domain AQ16_2747 PF00005 ABC transporter AQ16_2749 PF02350 UDP-N-acetylglucosamine 2-epimerase AQ16_275 PF16916 Dimerisation domain of Zinc Transporter AQ16_275 PF01545 Cation efflux family AQ16_2750 PF07977 FabA-like domain AQ16_2751 PF03816 Cell envelope-related transcriptional attenuator domain AQ16_2753 PF16363 GDP-mannose 4,6 dehydratase AQ16_2754 PF00072 Response regulator receiver domain AQ16_2754 PF00486 Transcriptional regulatory protein, C terminal AQ16_2755 PF18719 ArlS sensor domain AQ16_2755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ16_2755 PF00512 His Kinase A (phospho-acceptor) domain AQ16_2758 PF07690 Major Facilitator Superfamily AQ16_2759 PF12323 Helix-turn-helix domain AQ16_2759 PF01385 Probable transposase AQ16_2759 PF07282 Putative transposase DNA-binding domain AQ16_276 PF07070 SpoOM protein AQ16_2761 PF00005 ABC transporter AQ16_2762 PF12704 MacB-like periplasmic core domain AQ16_2762 PF02687 FtsX-like permease family AQ16_2763 PF04893 Yip1 domain AQ16_2764 PF04893 Yip1 domain AQ16_2765 PF04542 Sigma-70 region 2 AQ16_2765 PF04545 Sigma-70, region 4 AQ16_277 PF08239 Bacterial SH3 domain AQ16_277 PF00069 Protein kinase domain AQ16_2771 PF00271 Helicase conserved C-terminal domain AQ16_2771 PF12419 SNF2 Helicase protein AQ16_2771 PF00176 SNF2 family N-terminal domain AQ16_2772 PF04434 SWIM zinc finger AQ16_2777 PF06725 3D domain AQ16_2777 PF01476 LysM domain AQ16_2778 PF02028 BCCT, betaine/carnitine/choline family transporter AQ16_2782 PF01773 Na+ dependent nucleoside transporter N-terminus AQ16_2782 PF07662 Na+ dependent nucleoside transporter C-terminus AQ16_2783 PF00877 NlpC/P60 family AQ16_2783 PF01476 LysM domain AQ16_2784 PF01063 Amino-transferase class IV AQ16_2785 PF00884 Sulfatase AQ16_2787 PF09988 Uncharacterized metal-binding protein (DUF2227) AQ16_2789 PF02652 L-lactate permease AQ16_279 PF14162 YozD-like protein AQ16_2790 PF13667 ThiC-associated domain AQ16_2790 PF01964 Radical SAM ThiC family AQ16_2791 PF02040 Arsenical pump membrane protein AQ16_2792 PF02322 Cytochrome bd terminal oxidase subunit II AQ16_2793 PF01654 Cytochrome bd terminal oxidase subunit I AQ16_2796 PF03466 LysR substrate binding domain AQ16_2796 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AQ16_2798 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AQ16_2800 PF00375 Sodium:dicarboxylate symporter family AQ16_2801 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AQ16_2802 PF02378 Phosphotransferase system, EIIC AQ16_2803 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit AQ16_2804 PF02675 S-adenosylmethionine decarboxylase AQ16_2806 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AQ16_2807 PF02378 Phosphotransferase system, EIIC AQ16_2808 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit AQ16_2809 PF11975 Family 4 glycosyl hydrolase C-terminal domain AQ16_2809 PF02056 Family 4 glycosyl hydrolase AQ16_2810 PF04794 YdjC-like protein AQ16_2811 PF02417 Chromate transporter AQ16_2813 PF00158 Sigma-54 interaction domain AQ16_2813 PF03610 PTS system fructose IIA component AQ16_2813 PF00874 PRD domain AQ16_2815 PF00953 Glycosyl transferase family 4 AQ16_2816 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AQ16_2816 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AQ16_2816 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AQ16_2817 PF02350 UDP-N-acetylglucosamine 2-epimerase AQ16_2818 PF02350 UDP-N-acetylglucosamine 2-epimerase AQ16_2819 PF03816 Cell envelope-related transcriptional attenuator domain AQ16_282 PF06855 YozE SAM-like fold AQ16_2820 PF01205 Uncharacterized protein family UPF0029 AQ16_2820 PF09186 Domain of unknown function (DUF1949) AQ16_2821 PF02645 Uncharacterised protein, DegV family COG1307 AQ16_2822 PF01638 HxlR-like helix-turn-helix AQ16_2823 PF01476 LysM domain AQ16_2823 PF00877 NlpC/P60 family AQ16_2824 PF00271 Helicase conserved C-terminal domain AQ16_2824 PF04851 Type III restriction enzyme, res subunit AQ16_2826 PF00313 'Cold-shock' DNA-binding domain AQ16_2827 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus AQ16_2827 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AQ16_2828 PF02810 SEC-C motif AQ16_2828 PF07517 SecA DEAD-like domain AQ16_2828 PF01043 SecA preprotein cross-linking domain AQ16_2828 PF07516 SecA Wing and Scaffold domain AQ16_2829 PF03462 PCRF domain AQ16_2829 PF00472 RF-1 domain AQ16_283 PF14122 YokU-like protein, putative antitoxin AQ16_2830 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AQ16_2831 PF00005 ABC transporter AQ16_2832 PF02687 FtsX-like permease family AQ16_2832 PF18075 FtsX extracellular domain AQ16_2833 PF03572 Peptidase family S41 AQ16_2833 PF17820 PDZ domain AQ16_2833 PF01471 Putative peptidoglycan binding domain AQ16_2834 PF17820 PDZ domain AQ16_2835 PF00005 ABC transporter AQ16_2835 PF00664 ABC transporter transmembrane region AQ16_2836 PF01906 Putative heavy-metal-binding AQ16_2837 PF03358 NADPH-dependent FMN reductase AQ16_2838 PF00376 MerR family regulatory protein AQ16_2838 PF09278 MerR, DNA binding AQ16_2839 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AQ16_2839 PF03466 LysR substrate binding domain AQ16_284 PF12544 Lysine-2,3-aminomutase AQ16_2840 PF03601 Conserved hypothetical protein 698 AQ16_2846 PF13411 MerR HTH family regulatory protein AQ16_2846 PF07739 TipAS antibiotic-recognition domain AQ16_2849 PF17757 UvrB interaction domain AQ16_2849 PF00271 Helicase conserved C-terminal domain AQ16_2849 PF04851 Type III restriction enzyme, res subunit AQ16_2849 PF12344 Ultra-violet resistance protein B AQ16_2849 PF02151 UvrB/uvrC motif AQ16_285 PF02954 Bacterial regulatory protein, Fis family AQ16_285 PF13426 PAS domain AQ16_285 PF00158 Sigma-54 interaction domain AQ16_2850 PF00005 ABC transporter AQ16_2850 PF17755 UvrA DNA-binding domain AQ16_2850 PF17760 UvrA interaction domain AQ16_2852 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV AQ16_2853 PF07475 HPr Serine kinase C-terminal domain AQ16_2853 PF02603 HPr Serine kinase N terminus AQ16_2854 PF01790 Prolipoprotein diacylglyceryl transferase AQ16_2855 PF13419 Haloacid dehalogenase-like hydrolase AQ16_2856 PF14602 Hexapeptide repeat of succinyl-transferase AQ16_2858 PF07992 Pyridine nucleotide-disulphide oxidoreductase AQ16_286 PF00583 Acetyltransferase (GNAT) family AQ16_2860 PF00293 NUDIX domain AQ16_2861 PF03668 P-loop ATPase protein family AQ16_2862 PF01933 Uncharacterised protein family UPF0052 AQ16_2863 PF14527 WhiA LAGLIDADG-like domain AQ16_2863 PF10298 WhiA N-terminal LAGLIDADG-like domain AQ16_2863 PF02650 WhiA C-terminal HTH domain AQ16_2864 PF00381 PTS HPr component phosphorylation site AQ16_2865 PF00574 Clp protease AQ16_2866 PF04239 Protein of unknown function (DUF421) AQ16_2868 PF03862 SpoVAC/SpoVAEB sporulation membrane protein AQ16_2869 PF07451 Stage V sporulation protein AD (SpoVAD) AQ16_287 PF07687 Peptidase dimerisation domain AQ16_287 PF01546 Peptidase family M20/M25/M40 AQ16_2870 PF03862 SpoVAC/SpoVAEB sporulation membrane protein AQ16_2874 PF04552 Sigma-54, DNA binding domain AQ16_2874 PF04963 Sigma-54 factor, core binding domain AQ16_2874 PF00309 Sigma-54 factor, Activator interacting domain (AID) AQ16_2876 PF04198 Putative sugar-binding domain AQ16_2877 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AQ16_2877 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AQ16_2878 PF00162 Phosphoglycerate kinase AQ16_2879 PF00121 Triosephosphate isomerase AQ16_288 PF01144 Coenzyme A transferase AQ16_2880 PF01676 Metalloenzyme superfamily AQ16_2880 PF06415 BPG-independent PGAM N-terminus (iPGM_N) AQ16_2881 PF03952 Enolase, N-terminal domain AQ16_2881 PF00113 Enolase, C-terminal TIM barrel domain AQ16_2882 PF01156 Inosine-uridine preferring nucleoside hydrolase AQ16_2883 PF03788 LrgA family AQ16_2884 PF04172 LrgB-like family AQ16_2885 PF03840 Preprotein translocase SecG subunit AQ16_2886 PF12146 Serine aminopeptidase, S33 AQ16_2887 PF00575 S1 RNA binding domain AQ16_2887 PF00773 RNB domain AQ16_2887 PF08206 Ribonuclease B OB domain AQ16_2887 PF17876 Cold shock domain AQ16_2888 PF01668 SmpB protein AQ16_289 PF01144 Coenzyme A transferase AQ16_2890 PF00072 Response regulator receiver domain AQ16_2890 PF00486 Transcriptional regulatory protein, C terminal AQ16_2892 PF01032 FecCD transport family AQ16_2893 PF01032 FecCD transport family AQ16_2894 PF00005 ABC transporter AQ16_2895 PF06146 Phosphate-starvation-inducible E AQ16_2899 PF13302 Acetyltransferase (GNAT) domain AQ16_29 PF08450 SMP-30/Gluconolactonase/LRE-like region AQ16_290 PF00202 Aminotransferase class-III AQ16_2900 PF12848 ABC transporter AQ16_2900 PF00005 ABC transporter AQ16_2901 PF07690 Major Facilitator Superfamily AQ16_2904 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AQ16_2905 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AQ16_2907 PF00672 HAMP domain AQ16_2907 PF17202 Single cache domain 3 AQ16_2907 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AQ16_2909 PF01565 FAD binding domain AQ16_2909 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AQ16_2910 PF01479 S4 domain AQ16_2910 PF00579 tRNA synthetases class I (W and Y) AQ16_2911 PF07992 Pyridine nucleotide-disulphide oxidoreductase AQ16_2912 PF07849 Protein of unknown function (DUF1641) AQ16_2914 PF01638 HxlR-like helix-turn-helix AQ16_2915 PF07690 Major Facilitator Superfamily AQ16_2916 PF00248 Aldo/keto reductase family AQ16_2919 PF13460 NAD(P)H-binding AQ16_292 PF09385 Histidine kinase N terminal AQ16_2920 PF01235 Sodium:alanine symporter family AQ16_2921 PF01235 Sodium:alanine symporter family AQ16_2922 PF01773 Na+ dependent nucleoside transporter N-terminus AQ16_2922 PF07662 Na+ dependent nucleoside transporter C-terminus AQ16_2923 PF07662 Na+ dependent nucleoside transporter C-terminus AQ16_2923 PF01773 Na+ dependent nucleoside transporter N-terminus AQ16_2925 PF00210 Ferritin-like domain AQ16_2927 PF03641 Possible lysine decarboxylase AQ16_293 PF07997 Protein of unknown function (DUF1694) AQ16_2930 PF00210 Ferritin-like domain AQ16_2931 PF01235 Sodium:alanine symporter family AQ16_2932 PF02080 TrkA-C domain AQ16_2933 PF00999 Sodium/hydrogen exchanger family AQ16_2934 PF09335 SNARE associated Golgi protein AQ16_2936 PF01047 MarR family AQ16_2937 PF02678 Pirin AQ16_2937 PF17954 Quercetinase C-terminal cupin domain AQ16_2938 PF03413 Peptidase propeptide and YPEB domain AQ16_2938 PF07504 Fungalysin/Thermolysin Propeptide Motif AQ16_2938 PF01447 Thermolysin metallopeptidase, catalytic domain AQ16_2938 PF02868 Thermolysin metallopeptidase, alpha-helical domain AQ16_2939 PF01883 Iron-sulfur cluster assembly protein AQ16_294 PF00171 Aldehyde dehydrogenase family AQ16_2940 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AQ16_2940 PF00672 HAMP domain AQ16_2940 PF02743 Cache domain AQ16_2941 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AQ16_2941 PF00672 HAMP domain AQ16_2941 PF02743 Cache domain AQ16_2943 PF09334 tRNA synthetases class I (M) AQ16_2943 PF08264 Anticodon-binding domain of tRNA AQ16_2945 PF16736 Single Cache-like AQ16_2945 PF00512 His Kinase A (phospho-acceptor) domain AQ16_2945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ16_2945 PF00989 PAS fold AQ16_2946 PF00072 Response regulator receiver domain AQ16_2946 PF00486 Transcriptional regulatory protein, C terminal AQ16_2947 PF03734 L,D-transpeptidase catalytic domain AQ16_2947 PF17969 L,D-transpeptidase C-terminal domain AQ16_2949 PF09335 SNARE associated Golgi protein AQ16_295 PF01595 Cyclin M transmembrane N-terminal domain AQ16_295 PF03471 Transporter associated domain AQ16_295 PF00571 CBS domain AQ16_2957 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 AQ16_2957 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AQ16_2959 PF02096 60Kd inner membrane protein AQ16_2962 PF13520 Amino acid permease AQ16_2963 PF07690 Major Facilitator Superfamily AQ16_2967 PF00672 HAMP domain AQ16_2967 PF02743 Cache domain AQ16_2967 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AQ16_2968 PF01910 Thiamine-binding protein AQ16_2969 PF10835 Protein of unknown function (DUF2573) AQ16_2970 PF01619 Proline dehydrogenase AQ16_2971 PF00768 D-alanyl-D-alanine carboxypeptidase AQ16_2971 PF07943 Penicillin-binding protein 5, C-terminal domain AQ16_2972 PF14115 YuzL-like protein AQ16_2973 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AQ16_2973 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AQ16_2973 PF00378 Enoyl-CoA hydratase/isomerase AQ16_2974 PF00108 Thiolase, N-terminal domain AQ16_2974 PF02803 Thiolase, C-terminal domain AQ16_2975 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AQ16_2975 PF02770 Acyl-CoA dehydrogenase, middle domain AQ16_2975 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AQ16_2976 PF00753 Metallo-beta-lactamase superfamily AQ16_2977 PF00440 Bacterial regulatory proteins, tetR family AQ16_2977 PF13305 Tetracyclin repressor-like, C-terminal domain AQ16_2981 PF00056 lactate/malate dehydrogenase, NAD binding domain AQ16_2981 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AQ16_2986 PF03960 ArsC family AQ16_2987 PF01597 Glycine cleavage H-protein AQ16_2988 PF01751 Toprim domain AQ16_2989 PF00085 Thioredoxin AQ16_2991 PF09383 NIL domain AQ16_2991 PF00005 ABC transporter AQ16_2992 PF00528 Binding-protein-dependent transport system inner membrane component AQ16_2993 PF03180 NLPA lipoprotein AQ16_2994 PF03180 NLPA lipoprotein AQ16_2995 PF00005 ABC transporter AQ16_2996 PF01458 Uncharacterized protein family (UPF0051) AQ16_2997 PF00266 Aminotransferase class-V AQ16_2998 PF01592 NifU-like N terminal domain AQ16_2999 PF01458 Uncharacterized protein family (UPF0051) AQ16_3000 PF04892 VanZ like family AQ16_3001 PF03551 Transcriptional regulator PadR-like family AQ16_3003 PF02872 5'-nucleotidase, C-terminal domain AQ16_3004 PF08827 Domain of unknown function (DUF1805) AQ16_3005 PF09560 Sporulation protein YunB (Spo_YunB) AQ16_3006 PF01551 Peptidase family M23 AQ16_3007 PF04055 Radical SAM superfamily AQ16_3007 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family AQ16_301 PF13520 Amino acid permease AQ16_3011 PF10086 YhfC intramembrane metalloprotease AQ16_3012 PF13411 MerR HTH family regulatory protein AQ16_3012 PF07739 TipAS antibiotic-recognition domain AQ16_3013 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) AQ16_3014 PF06265 Protein of unknown function (DUF1027) AQ16_3017 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded AQ16_3018 PF01934 Protein of unknown function DUF86 AQ16_302 PF00528 Binding-protein-dependent transport system inner membrane component AQ16_3020 PF13344 Haloacid dehalogenase-like hydrolase AQ16_3022 PF02525 Flavodoxin-like fold AQ16_3024 PF11202 Phosphoribosyl transferase (PRTase) AQ16_3024 PF15608 PELOTA RNA binding domain AQ16_3028 PF04608 Phosphatidylglycerophosphatase A AQ16_303 PF00005 ABC transporter AQ16_303 PF00571 CBS domain AQ16_3031 PF01106 NifU-like domain AQ16_3032 PF07315 Protein of unknown function (DUF1462) AQ16_3036 PF03831 PhnA domain AQ16_3036 PF08274 PhnA Zinc-Ribbon AQ16_3037 PF03649 Uncharacterised protein family (UPF0014) AQ16_3038 PF00005 ABC transporter AQ16_3038 PF09383 NIL domain AQ16_3039 PF07992 Pyridine nucleotide-disulphide oxidoreductase AQ16_3040 PF07293 Protein of unknown function (DUF1450) AQ16_3041 PF01678 Diaminopimelate epimerase AQ16_3042 PF01521 Iron-sulphur cluster biosynthesis AQ16_3046 PF04463 Protein of unknown function (DUF523) AQ16_3049 PF06445 GyrI-like small molecule binding domain AQ16_3050 PF07992 Pyridine nucleotide-disulphide oxidoreductase AQ16_3051 PF07992 Pyridine nucleotide-disulphide oxidoreductase AQ16_3052 PF13344 Haloacid dehalogenase-like hydrolase AQ16_3052 PF00293 NUDIX domain AQ16_3054 PF06725 3D domain AQ16_3055 PF00883 Cytosol aminopeptidase family, catalytic domain AQ16_3055 PF02789 Cytosol aminopeptidase family, N-terminal domain AQ16_3056 PF10372 Bacterial membrane-spanning protein N-terminus AQ16_3056 PF02457 DisA bacterial checkpoint controller nucleotide-binding AQ16_3057 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AQ16_3057 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AQ16_3057 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AQ16_3057 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AQ16_3058 PF00483 Nucleotidyl transferase AQ16_3060 PF02632 BioY family AQ16_3062 PF03061 Thioesterase superfamily AQ16_3063 PF03129 Anticodon binding domain AQ16_3063 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AQ16_3066 PF03600 Citrate transporter AQ16_3067 PF00929 Exonuclease AQ16_3068 PF08810 Kinase associated protein B AQ16_307 PF03358 NADPH-dependent FMN reductase AQ16_3071 PF00155 Aminotransferase class I and II AQ16_3073 PF00561 alpha/beta hydrolase fold AQ16_3073 PF08386 TAP-like protein AQ16_3074 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AQ16_3074 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AQ16_3075 PF01037 Lrp/AsnC ligand binding domain AQ16_3076 PF00155 Aminotransferase class I and II AQ16_3077 PF00575 S1 RNA binding domain AQ16_3078 PF04070 Domain of unknown function (DUF378) AQ16_3079 PF00342 Phosphoglucose isomerase AQ16_3080 PF02254 TrkA-N domain AQ16_3080 PF07885 Ion channel AQ16_3081 PF08868 YugN-like family AQ16_3082 PF02308 MgtC family AQ16_3090 PF05697 Bacterial trigger factor protein (TF) AQ16_3090 PF05698 Bacterial trigger factor protein (TF) C-terminus AQ16_31 PF08245 Mur ligase middle domain AQ16_31 PF01225 Mur ligase family, catalytic domain AQ16_31 PF02875 Mur ligase family, glutamate ligase domain AQ16_310 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain AQ16_310 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AQ16_3109 PF04542 Sigma-70 region 2 AQ16_3109 PF08281 Sigma-70, region 4 AQ16_311 PF02447 GntP family permease AQ16_3111 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AQ16_3111 PF00056 lactate/malate dehydrogenase, NAD binding domain AQ16_3112 PF13860 FlgD Ig-like domain AQ16_3112 PF02225 PA domain AQ16_3112 PF00082 Subtilase family AQ16_3112 PF05922 Peptidase inhibitor I9 AQ16_3114 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AQ16_3114 PF00128 Alpha amylase, catalytic domain AQ16_3114 PF02806 Alpha amylase, C-terminal all-beta domain AQ16_3115 PF00483 Nucleotidyl transferase AQ16_3116 PF00483 Nucleotidyl transferase AQ16_3117 PF08323 Starch synthase catalytic domain AQ16_3117 PF00534 Glycosyl transferases group 1 AQ16_3118 PF00343 Carbohydrate phosphorylase AQ16_312 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AQ16_312 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AQ16_3121 PF00376 MerR family regulatory protein AQ16_3121 PF09278 MerR, DNA binding AQ16_3123 PF00313 'Cold-shock' DNA-binding domain AQ16_3124 PF01258 Prokaryotic dksA/traR C4-type zinc finger AQ16_3125 PF01040 UbiA prenyltransferase family AQ16_3126 PF00425 chorismate binding enzyme AQ16_3127 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AQ16_3127 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AQ16_3127 PF16582 Middle domain of thiamine pyrophosphate AQ16_3128 PF00561 alpha/beta hydrolase fold AQ16_3129 PF00378 Enoyl-CoA hydratase/isomerase AQ16_3130 PF13193 AMP-binding enzyme C-terminal domain AQ16_3130 PF00501 AMP-binding enzyme AQ16_3131 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AQ16_3131 PF13378 Enolase C-terminal domain-like AQ16_3132 PF00486 Transcriptional regulatory protein, C terminal AQ16_3132 PF00072 Response regulator receiver domain AQ16_3133 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ16_3133 PF00512 His Kinase A (phospho-acceptor) domain AQ16_3134 PF02557 D-alanyl-D-alanine carboxypeptidase AQ16_3137 PF01979 Amidohydrolase family AQ16_3138 PF03841 L-seryl-tRNA selenium transferase AQ16_3139 PF07071 KDGP aldolase AQ16_3142 PF02447 GntP family permease AQ16_3144 PF13977 BetI-type transcriptional repressor, C-terminal AQ16_3144 PF00440 Bacterial regulatory proteins, tetR family AQ16_3146 PF02687 FtsX-like permease family AQ16_3147 PF00005 ABC transporter AQ16_3148 PF02687 FtsX-like permease family AQ16_3149 PF02687 FtsX-like permease family AQ16_315 PF00144 Beta-lactamase AQ16_3150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ16_3151 PF00486 Transcriptional regulatory protein, C terminal AQ16_3151 PF00072 Response regulator receiver domain AQ16_3152 PF01022 Bacterial regulatory protein, arsR family AQ16_3153 PF13630 SdpI/YhfL protein family AQ16_3153 PF07853 Protein of unknown function (DUF1648) AQ16_3154 PF12833 Helix-turn-helix domain AQ16_3154 PF06445 GyrI-like small molecule binding domain AQ16_3155 PF00005 ABC transporter AQ16_3156 PF02687 FtsX-like permease family AQ16_3158 PF12833 Helix-turn-helix domain AQ16_3158 PF02311 AraC-like ligand binding domain AQ16_3159 PF00398 Ribosomal RNA adenine dimethylase AQ16_3160 PF09335 SNARE associated Golgi protein AQ16_3165 PF00781 Diacylglycerol kinase catalytic domain AQ16_3171 PF00486 Transcriptional regulatory protein, C terminal AQ16_3171 PF00072 Response regulator receiver domain AQ16_3172 PF00512 His Kinase A (phospho-acceptor) domain AQ16_3172 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ16_3172 PF00672 HAMP domain AQ16_3173 PF09515 Thiamine transporter protein (Thia_YuaJ) AQ16_3175 PF07664 Ferrous iron transport protein B C terminus AQ16_3175 PF02421 Ferrous iron transport protein B AQ16_3175 PF07670 Nucleoside recognition AQ16_3175 PF17910 FeoB cytosolic helical domain AQ16_3178 PF04012 PspA/IM30 family AQ16_318 PF00107 Zinc-binding dehydrogenase AQ16_318 PF08240 Alcohol dehydrogenase GroES-like domain AQ16_3183 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 AQ16_3183 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AQ16_3187 PF10676 Spore germination protein gerPA/gerPF AQ16_3188 PF02322 Cytochrome bd terminal oxidase subunit II AQ16_3189 PF01654 Cytochrome bd terminal oxidase subunit I AQ16_319 PF01418 Helix-turn-helix domain, rpiR family AQ16_319 PF01380 SIS domain AQ16_3190 PF01809 Putative membrane protein insertion efficiency factor AQ16_3191 PF00484 Carbonic anhydrase AQ16_3192 PF02664 S-Ribosylhomocysteinase (LuxS) AQ16_32 PF08241 Methyltransferase domain AQ16_320 PF00072 Response regulator receiver domain AQ16_320 PF00196 Bacterial regulatory proteins, luxR family AQ16_3201 PF00293 NUDIX domain AQ16_3206 PF00528 Binding-protein-dependent transport system inner membrane component AQ16_3207 PF00005 ABC transporter AQ16_321 PF13185 GAF domain AQ16_321 PF07730 Histidine kinase AQ16_3211 PF00884 Sulfatase AQ16_3212 PF00561 alpha/beta hydrolase fold AQ16_3212 PF08386 TAP-like protein AQ16_3213 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ16_3213 PF00512 His Kinase A (phospho-acceptor) domain AQ16_3213 PF00989 PAS fold AQ16_3213 PF08447 PAS fold AQ16_3214 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ16_3214 PF00512 His Kinase A (phospho-acceptor) domain AQ16_3214 PF00989 PAS fold AQ16_3214 PF13188 PAS domain AQ16_3214 PF13426 PAS domain AQ16_322 PF00924 Mechanosensitive ion channel AQ16_3226 PF01293 Phosphoenolpyruvate carboxykinase AQ16_3227 PF02772 S-adenosylmethionine synthetase, central domain AQ16_3227 PF02773 S-adenosylmethionine synthetase, C-terminal domain AQ16_3227 PF00438 S-adenosylmethionine synthetase, N-terminal domain AQ16_3229 PF00994 Probable molybdopterin binding domain AQ16_323 PF00857 Isochorismatase family AQ16_3230 PF12804 MobA-like NTP transferase domain AQ16_3231 PF13439 Glycosyltransferase Family 4 AQ16_3231 PF00534 Glycosyl transferases group 1 AQ16_3232 PF01569 PAP2 superfamily AQ16_3233 PF00132 Bacterial transferase hexapeptide (six repeats) AQ16_3234 PF12146 Serine aminopeptidase, S33 AQ16_3235 PF10776 Protein of unknown function (DUF2600) AQ16_3240 PF01177 Asp/Glu/Hydantoin racemase AQ16_3242 PF13732 Domain of unknown function (DUF4162) AQ16_3242 PF00005 ABC transporter AQ16_3243 PF06962 Putative rRNA methylase AQ16_3244 PF16199 Radical_SAM C-terminal domain AQ16_3244 PF04055 Radical SAM superfamily AQ16_3245 PF10732 Protein of unknown function (DUF2524) AQ16_3247 PF07786 Protein of unknown function (DUF1624) AQ16_3247 PF04235 Protein of unknown function (DUF418) AQ16_3248 PF00005 ABC transporter AQ16_325 PF00881 Nitroreductase family AQ16_3250 PF00589 Phage integrase family AQ16_3251 PF02080 TrkA-C domain AQ16_3252 PF00999 Sodium/hydrogen exchanger family AQ16_3253 PF07690 Major Facilitator Superfamily AQ16_3254 PF09334 tRNA synthetases class I (M) AQ16_3254 PF13603 Leucyl-tRNA synthetase, Domain 2 AQ16_3254 PF00133 tRNA synthetases class I (I, L, M and V) AQ16_3254 PF08264 Anticodon-binding domain of tRNA AQ16_3259 PF03845 Spore germination protein AQ16_326 PF01063 Amino-transferase class IV AQ16_3260 PF03323 Bacillus/Clostridium GerA spore germination protein AQ16_3261 PF00561 alpha/beta hydrolase fold AQ16_3263 PF00581 Rhodanese-like domain AQ16_3267 PF06463 Molybdenum Cofactor Synthesis C AQ16_3267 PF04055 Radical SAM superfamily AQ16_3268 PF00899 ThiF family AQ16_3269 PF01967 MoaC family AQ16_327 PF01497 Periplasmic binding protein AQ16_3270 PF00994 Probable molybdopterin binding domain AQ16_3270 PF03454 MoeA C-terminal region (domain IV) AQ16_3270 PF03453 MoeA N-terminal region (domain I and II) AQ16_3271 PF03205 Molybdopterin guanine dinucleotide synthesis protein B AQ16_3272 PF02391 MoaE protein AQ16_3275 PF06800 Sugar transport protein AQ16_3277 PF02559 CarD-like/TRCF domain AQ16_3279 PF10957 Sporulation protein Cse60 AQ16_3281 PF08327 Activator of Hsp90 ATPase homolog 1-like protein AQ16_3282 PF01022 Bacterial regulatory protein, arsR family AQ16_3283 PF07690 Major Facilitator Superfamily AQ16_3285 PF14667 Polysaccharide biosynthesis C-terminal domain AQ16_3285 PF01943 Polysaccharide biosynthesis protein AQ16_3286 PF01479 S4 domain AQ16_3286 PF00849 RNA pseudouridylate synthase AQ16_3287 PF08220 DeoR-like helix-turn-helix domain AQ16_3288 PF01546 Peptidase family M20/M25/M40 AQ16_3289 PF02834 LigT like Phosphoesterase AQ16_3290 PF00128 Alpha amylase, catalytic domain AQ16_3290 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AQ16_3290 PF17999 Pullulanase N1-terminal domain AQ16_3291 PF01636 Phosphotransferase enzyme family AQ16_3292 PF14165 YtzH-like protein AQ16_3293 PF02390 Putative methyltransferase AQ16_3294 PF00753 Metallo-beta-lactamase superfamily AQ16_3296 PF05343 M42 glutamyl aminopeptidase AQ16_3297 PF01931 Protein of unknown function DUF84 AQ16_3298 PF00085 Thioredoxin AQ16_3299 PF07285 Protein of unknown function (DUF1444) AQ16_33 PF04239 Protein of unknown function (DUF421) AQ16_3300 PF14794 Domain of unknown function (DUF4479) AQ16_3300 PF01588 Putative tRNA binding domain AQ16_3302 PF01520 N-acetylmuramoyl-L-alanine amidase AQ16_3302 PF08239 Bacterial SH3 domain AQ16_3303 PF01580 FtsK/SpoIIIE family AQ16_3303 PF09397 Ftsk gamma domain AQ16_3303 PF17854 FtsK alpha domain AQ16_3305 PF02875 Mur ligase family, glutamate ligase domain AQ16_3305 PF01225 Mur ligase family, catalytic domain AQ16_3305 PF08245 Mur ligase middle domain AQ16_3307 PF03551 Transcriptional regulator PadR-like family AQ16_3308 PF13411 MerR HTH family regulatory protein AQ16_3309 PF00892 EamA-like transporter family AQ16_331 PF13537 Glutamine amidotransferase domain AQ16_331 PF00733 Asparagine synthase AQ16_3310 PF13302 Acetyltransferase (GNAT) domain AQ16_3314 PF02073 Thermophilic metalloprotease (M29) AQ16_3316 PF11009 Protein of unknown function (DUF2847) AQ16_3317 PF07537 CamS sex pheromone cAM373 precursor AQ16_3318 PF00356 Bacterial regulatory proteins, lacI family AQ16_332 PF00011 Hsp20/alpha crystallin family AQ16_3322 PF01741 Large-conductance mechanosensitive channel, MscL AQ16_3323 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AQ16_3324 PF00072 Response regulator receiver domain AQ16_3324 PF04397 LytTr DNA-binding domain AQ16_3328 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ16_3328 PF06580 Histidine kinase AQ16_333 PF02630 SCO1/SenC AQ16_3330 PF00561 alpha/beta hydrolase fold AQ16_3331 PF00850 Histone deacetylase domain AQ16_3332 PF00571 CBS domain AQ16_3333 PF00583 Acetyltransferase (GNAT) family AQ16_3334 PF13193 AMP-binding enzyme C-terminal domain AQ16_3334 PF00501 AMP-binding enzyme AQ16_3335 PF14602 Hexapeptide repeat of succinyl-transferase AQ16_3335 PF12464 Maltose acetyltransferase AQ16_3339 PF00579 tRNA synthetases class I (W and Y) AQ16_3339 PF01479 S4 domain AQ16_3343 PF01479 S4 domain AQ16_3343 PF00163 Ribosomal protein S4/S9 N-terminal domain AQ16_3344 PF01053 Cys/Met metabolism PLP-dependent enzyme AQ16_3345 PF13185 GAF domain AQ16_3346 PF00440 Bacterial regulatory proteins, tetR family AQ16_3347 PF00892 EamA-like transporter family AQ16_3348 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AQ16_3348 PF03466 LysR substrate binding domain AQ16_3349 PF06160 Septation ring formation regulator, EzrA AQ16_335 PF02645 Uncharacterised protein, DegV family COG1307 AQ16_3350 PF00266 Aminotransferase class-V AQ16_3351 PF02568 Thiamine biosynthesis protein (ThiI) AQ16_3351 PF02926 THUMP domain AQ16_3352 PF00269 Small, acid-soluble spore proteins, alpha/beta type AQ16_3353 PF13193 AMP-binding enzyme C-terminal domain AQ16_3353 PF00501 AMP-binding enzyme AQ16_3355 PF07969 Amidohydrolase family AQ16_3356 PF01513 ATP-NAD kinase AQ16_3358 PF09579 Sporulation protein YtfJ (Spore_YtfJ) AQ16_3359 PF08534 Redoxin AQ16_3360 PF02384 N-6 DNA Methylase AQ16_3361 PF00871 Acetokinase family AQ16_3364 PF12787 EcsC protein family AQ16_3365 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AQ16_3365 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 AQ16_3369 PF00764 Arginosuccinate synthase AQ16_337 PF00902 Sec-independent protein translocase protein (TatC) AQ16_3370 PF14698 Argininosuccinate lyase C-terminal AQ16_3370 PF00206 Lyase AQ16_3373 PF00582 Universal stress protein family AQ16_3375 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AQ16_3375 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AQ16_3377 PF01381 Helix-turn-helix AQ16_3379 PF07883 Cupin domain AQ16_338 PF02416 mttA/Hcf106 family AQ16_3380 PF12746 GNAT acetyltransferase AQ16_3387 PF11518 Protein of unknown function (DUF3221) AQ16_3388 PF00557 Metallopeptidase family M24 AQ16_3388 PF01321 Creatinase/Prolidase N-terminal domain AQ16_339 PF03006 Haemolysin-III related AQ16_3391 PF00392 Bacterial regulatory proteins, gntR family AQ16_3391 PF07085 DRTGG domain AQ16_3391 PF00571 CBS domain AQ16_3391 PF03061 Thioesterase superfamily AQ16_3393 PF01636 Phosphotransferase enzyme family AQ16_3395 PF14007 YtpI-like protein AQ16_3396 PF01368 DHH family AQ16_3396 PF02272 DHHA1 domain AQ16_3398 PF14034 Sporulation protein YtrH AQ16_3399 PF07733 Bacterial DNA polymerase III alpha NTPase domain AQ16_3399 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AQ16_3399 PF01336 OB-fold nucleic acid binding domain AQ16_3399 PF02811 PHP domain AQ16_3399 PF14579 Helix-hairpin-helix motif AQ16_340 PF01553 Acyltransferase AQ16_3400 PF00390 Malic enzyme, N-terminal domain AQ16_3400 PF03949 Malic enzyme, NAD binding domain AQ16_3401 PF00392 Bacterial regulatory proteins, gntR family AQ16_3402 PF17848 Acetyl-coA carboxylase zinc finger domain AQ16_3402 PF01039 Carboxyl transferase domain AQ16_3403 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AQ16_3404 PF00365 Phosphofructokinase AQ16_3405 PF00391 PEP-utilising enzyme, mobile domain AQ16_3405 PF00224 Pyruvate kinase, barrel domain AQ16_3405 PF02887 Pyruvate kinase, alpha/beta domain AQ16_3406 PF04186 FxsA cytoplasmic membrane protein AQ16_3407 PF01594 AI-2E family transporter AQ16_3408 PF04284 Protein of unknown function (DUF441) AQ16_3409 PF00285 Citrate synthase, C-terminal domain AQ16_341 PF02525 Flavodoxin-like fold AQ16_3410 PF00180 Isocitrate/isopropylmalate dehydrogenase AQ16_3411 PF00056 lactate/malate dehydrogenase, NAD binding domain AQ16_3411 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AQ16_3415 PF00072 Response regulator receiver domain AQ16_3415 PF00486 Transcriptional regulatory protein, C terminal AQ16_3416 PF16736 Single Cache-like AQ16_3416 PF00989 PAS fold AQ16_3416 PF00512 His Kinase A (phospho-acceptor) domain AQ16_3416 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ16_3417 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AQ16_3417 PF01367 5'-3' exonuclease, C-terminal SAM fold AQ16_3417 PF00476 DNA polymerase family A AQ16_3418 PF06827 Zinc finger found in FPG and IleRS AQ16_3418 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AQ16_3418 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AQ16_3419 PF02659 Putative manganese efflux pump AQ16_342 PF03717 Penicillin-binding Protein dimerisation domain AQ16_342 PF05223 NTF2-like N-terminal transpeptidase domain AQ16_342 PF00905 Penicillin binding protein transpeptidase domain AQ16_3420 PF01121 Dephospho-CoA kinase AQ16_3421 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AQ16_3421 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AQ16_3423 PF02675 S-adenosylmethionine decarboxylase AQ16_3424 PF03477 ATP cone domain AQ16_3425 PF07261 Replication initiation and membrane attachment AQ16_3426 PF07319 Primosomal protein DnaI N-terminus AQ16_3426 PF01695 IstB-like ATP binding protein AQ16_3427 PF08812 YtxC-like family AQ16_3428 PF02824 TGS domain AQ16_3428 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AQ16_3428 PF03129 Anticodon binding domain AQ16_3428 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AQ16_3429 PF00707 Translation initiation factor IF-3, C-terminal domain AQ16_3429 PF05198 Translation initiation factor IF-3, N-terminal domain AQ16_343 PF00186 Dihydrofolate reductase AQ16_3430 PF01632 Ribosomal protein L35 AQ16_3431 PF00453 Ribosomal protein L20 AQ16_3433 PF05343 M42 glutamyl aminopeptidase AQ16_3434 PF00440 Bacterial regulatory proteins, tetR family AQ16_3434 PF16859 Tetracyclin repressor-like, C-terminal domain AQ16_3436 PF07690 Major Facilitator Superfamily AQ16_3438 PF01966 HD domain AQ16_3439 PF14098 Small, acid-soluble spore protein I AQ16_344 PF00303 Thymidylate synthase AQ16_3440 PF00588 SpoU rRNA Methylase family AQ16_3440 PF08032 RNA 2'-O ribose methyltransferase substrate binding AQ16_3441 PF01409 tRNA synthetases class II core domain (F) AQ16_3441 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AQ16_3442 PF03147 Ferredoxin-fold anticodon binding domain AQ16_3442 PF03484 tRNA synthetase B5 domain AQ16_3442 PF01588 Putative tRNA binding domain AQ16_3442 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AQ16_3442 PF03483 B3/4 domain AQ16_3443 PF00152 tRNA synthetases class II (D, K and N) AQ16_3443 PF01336 OB-fold nucleic acid binding domain AQ16_3446 PF11858 Domain of unknown function (DUF3378) AQ16_3446 PF01351 Ribonuclease HII AQ16_3447 PF05164 Cell division protein ZapA AQ16_3448 PF02674 Colicin V production protein AQ16_3449 PF14716 Helix-hairpin-helix domain AQ16_3449 PF02811 PHP domain AQ16_3449 PF14791 DNA polymerase beta thumb AQ16_345 PF00144 Beta-lactamase AQ16_345 PF07930 D-aminopeptidase, domain B AQ16_3450 PF00488 MutS domain V AQ16_3450 PF01713 Smr domain AQ16_3452 PF01479 S4 domain AQ16_3452 PF00849 RNA pseudouridylate synthase AQ16_3453 PF05525 Branched-chain amino acid transport protein AQ16_3454 PF05031 Iron Transport-associated domain AQ16_3456 PF05031 Iron Transport-associated domain AQ16_3457 PF01497 Periplasmic binding protein AQ16_3458 PF01032 FecCD transport family AQ16_3459 PF00005 ABC transporter AQ16_3460 PF04203 Sortase domain AQ16_3461 PF03992 Antibiotic biosynthesis monooxygenase AQ16_3462 PF10672 S-adenosylmethionine-dependent methyltransferase AQ16_3462 PF17785 PUA-like domain AQ16_3463 PF09962 Uncharacterized conserved protein (DUF2196) AQ16_3465 PF00072 Response regulator receiver domain AQ16_3465 PF00486 Transcriptional regulatory protein, C terminal AQ16_3466 PF00512 His Kinase A (phospho-acceptor) domain AQ16_3466 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ16_3467 PF00005 ABC transporter AQ16_3473 PF05163 DinB family AQ16_3475 PF13193 AMP-binding enzyme C-terminal domain AQ16_3475 PF00501 AMP-binding enzyme AQ16_3476 PF00440 Bacterial regulatory proteins, tetR family AQ16_3476 PF08359 YsiA-like protein, C-terminal region AQ16_3477 PF00378 Enoyl-CoA hydratase/isomerase AQ16_3478 PF01012 Electron transfer flavoprotein domain AQ16_3479 PF00766 Electron transfer flavoprotein FAD-binding domain AQ16_3479 PF01012 Electron transfer flavoprotein domain AQ16_348 PF13419 Haloacid dehalogenase-like hydrolase AQ16_3480 PF00085 Thioredoxin AQ16_3481 PF02151 UvrB/uvrC motif AQ16_3481 PF08459 UvrC Helix-hairpin-helix N-terminal AQ16_3481 PF01541 GIY-YIG catalytic domain AQ16_3482 PF10702 Protein of unknown function (DUF2507) AQ16_3483 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AQ16_3484 PF00890 FAD binding domain AQ16_3484 PF02910 Fumarate reductase flavoprotein C-term AQ16_3485 PF13183 4Fe-4S dicluster domain AQ16_3485 PF13085 2Fe-2S iron-sulfur cluster binding domain AQ16_3486 PF03061 Thioesterase superfamily AQ16_3489 PF01618 MotA/TolQ/ExbB proton channel family AQ16_349 PF14005 YpjP-like protein AQ16_3490 PF13677 Membrane MotB of proton-channel complex MotA/MotB AQ16_3490 PF00691 OmpA family AQ16_3491 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) AQ16_3492 PF13732 Domain of unknown function (DUF4162) AQ16_3492 PF00005 ABC transporter AQ16_3494 PF02082 Transcriptional regulator AQ16_3495 PF00230 Major intrinsic protein AQ16_3496 PF13536 Putative multidrug resistance efflux transporter AQ16_3497 PF01381 Helix-turn-helix AQ16_3497 PF07883 Cupin domain AQ16_3498 PF04024 PspC domain AQ16_3499 PF07969 Amidohydrolase family AQ16_350 PF05975 Bacterial ABC transporter protein EcsB AQ16_3500 PF00860 Permease family AQ16_3501 PF00196 Bacterial regulatory proteins, luxR family AQ16_351 PF00005 ABC transporter AQ16_3526 PF11490 DNA polymerase III polC-type N-terminus II AQ16_3526 PF07733 Bacterial DNA polymerase III alpha NTPase domain AQ16_3526 PF00929 Exonuclease AQ16_3526 PF02811 PHP domain AQ16_3526 PF14579 Helix-hairpin-helix motif AQ16_3526 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AQ16_3535 PF00440 Bacterial regulatory proteins, tetR family AQ16_3537 PF07690 Major Facilitator Superfamily AQ16_3538 PF01177 Asp/Glu/Hydantoin racemase AQ16_3539 PF10646 Sporulation and spore germination AQ16_354 PF00583 Acetyltransferase (GNAT) family AQ16_3540 PF03725 3' exoribonuclease family, domain 2 AQ16_3540 PF01138 3' exoribonuclease family, domain 1 AQ16_3541 PF01725 Ham1 family AQ16_3542 PF12850 Calcineurin-like phosphoesterase superfamily domain AQ16_3546 PF11724 YvbH-like oligomerisation region AQ16_3546 PF08000 Bacterial PH domain AQ16_355 PF01980 tRNA-methyltransferase O AQ16_3550 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AQ16_3550 PF05698 Bacterial trigger factor protein (TF) C-terminus AQ16_3550 PF05697 Bacterial trigger factor protein (TF) AQ16_3551 PF06689 ClpX C4-type zinc finger AQ16_3551 PF10431 C-terminal, D2-small domain, of ClpB protein AQ16_3551 PF07724 AAA domain (Cdc48 subfamily) AQ16_3552 PF00004 ATPase family associated with various cellular activities (AAA) AQ16_3552 PF05362 Lon protease (S16) C-terminal proteolytic domain AQ16_3553 PF00004 ATPase family associated with various cellular activities (AAA) AQ16_3553 PF05362 Lon protease (S16) C-terminal proteolytic domain AQ16_3553 PF02190 ATP-dependent protease La (LON) substrate-binding domain AQ16_3554 PF01926 50S ribosome-binding GTPase AQ16_3555 PF02566 OsmC-like protein AQ16_3556 PF01047 MarR family AQ16_3557 PF01488 Shikimate / quinate 5-dehydrogenase AQ16_3557 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AQ16_3557 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AQ16_3558 PF01578 Cytochrome C assembly protein AQ16_3559 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AQ16_3559 PF03900 Porphobilinogen deaminase, C-terminal domain AQ16_356 PF01177 Asp/Glu/Hydantoin racemase AQ16_3560 PF02602 Uroporphyrinogen-III synthase HemD AQ16_3561 PF00490 Delta-aminolevulinic acid dehydratase AQ16_3562 PF00202 Aminotransferase class-III AQ16_3563 PF01476 LysM domain AQ16_3565 PF00133 tRNA synthetases class I (I, L, M and V) AQ16_3565 PF08264 Anticodon-binding domain of tRNA AQ16_3565 PF10458 Valyl tRNA synthetase tRNA binding arm AQ16_3566 PF02875 Mur ligase family, glutamate ligase domain AQ16_3566 PF08245 Mur ligase middle domain AQ16_3568 PF02545 Maf-like protein AQ16_3569 PF04002 RadC-like JAB domain AQ16_357 PF00465 Iron-containing alcohol dehydrogenase AQ16_3571 PF04085 rod shape-determining protein MreC AQ16_3573 PF03775 Septum formation inhibitor MinC, C-terminal domain AQ16_3574 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AQ16_3575 PF01551 Peptidase family M23 AQ16_3576 PF02163 Peptidase family M50 AQ16_3577 PF10150 Ribonuclease E/G family AQ16_3577 PF00575 S1 RNA binding domain AQ16_3578 PF00829 Ribosomal prokaryotic L21 protein AQ16_3579 PF04327 Cysteine protease Prp AQ16_3580 PF01016 Ribosomal L27 protein AQ16_3581 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain AQ16_3581 PF14682 Sporulation initiation phospho-transferase B, C-terminal AQ16_3582 PF09269 Domain of unknown function (DUF1967) AQ16_3582 PF01018 GTP1/OBG AQ16_3582 PF01926 50S ribosome-binding GTPase AQ16_3583 PF00486 Transcriptional regulatory protein, C terminal AQ16_3583 PF00072 Response regulator receiver domain AQ16_3584 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ16_3585 PF00005 ABC transporter AQ16_3586 PF02687 FtsX-like permease family AQ16_3587 PF02687 FtsX-like permease family AQ16_3588 PF00800 Prephenate dehydratase AQ16_3588 PF01842 ACT domain AQ16_3589 PF03473 MOSC domain AQ16_3589 PF03475 3-alpha domain AQ16_359 PF13419 Haloacid dehalogenase-like hydrolase AQ16_3590 PF02829 3H domain AQ16_3590 PF08279 HTH domain AQ16_3591 PF00266 Aminotransferase class-V AQ16_3592 PF00890 FAD binding domain AQ16_3592 PF02910 Fumarate reductase flavoprotein C-term AQ16_3593 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AQ16_3593 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AQ16_3594 PF02445 Quinolinate synthetase A protein AQ16_3595 PF01476 LysM domain AQ16_3598 PF01022 Bacterial regulatory protein, arsR family AQ16_3599 PF00892 EamA-like transporter family AQ16_360 PF13419 Haloacid dehalogenase-like hydrolase AQ16_3601 PF01497 Periplasmic binding protein AQ16_3602 PF01330 RuvA N terminal domain AQ16_3602 PF07499 RuvA, C-terminal domain AQ16_3603 PF05496 Holliday junction DNA helicase RuvB P-loop domain AQ16_3603 PF05491 RuvB C-terminal winged helix domain AQ16_3603 PF17864 RuvB AAA lid domain AQ16_3604 PF11146 Protein of unknown function (DUF2905) AQ16_3605 PF02547 Queuosine biosynthesis protein AQ16_3606 PF01702 Queuine tRNA-ribosyltransferase AQ16_3607 PF02699 Preprotein translocase subunit AQ16_3609 PF04239 Protein of unknown function (DUF421) AQ16_361 PF10997 Alternate to MurJ AQ16_3610 PF01943 Polysaccharide biosynthesis protein AQ16_3610 PF14667 Polysaccharide biosynthesis C-terminal domain AQ16_3611 PF13797 Post-transcriptional regulator AQ16_3612 PF02355 Protein export membrane protein AQ16_3612 PF07549 SecD/SecF GG Motif AQ16_3613 PF16916 Dimerisation domain of Zinc Transporter AQ16_3613 PF01545 Cation efflux family AQ16_3614 PF01368 DHH family AQ16_3614 PF02272 DHHA1 domain AQ16_3614 PF17768 RecJ OB domain AQ16_3614 PF10141 Single-strand DNA-specific exonuclease, C terminal domain AQ16_3615 PF00156 Phosphoribosyl transferase domain AQ16_3616 PF04607 Region found in RelA / SpoT proteins AQ16_3616 PF02824 TGS domain AQ16_3616 PF13291 ACT domain AQ16_3617 PF02580 D-Tyr-tRNA(Tyr) deacylase AQ16_3619 PF03129 Anticodon binding domain AQ16_3619 PF13393 Histidyl-tRNA synthetase AQ16_3620 PF02938 GAD domain AQ16_3620 PF00152 tRNA synthetases class II (D, K and N) AQ16_3620 PF01336 OB-fold nucleic acid binding domain AQ16_3621 PF00899 ThiF family AQ16_3623 PF17866 AAA lid domain AQ16_3623 PF00004 ATPase family associated with various cellular activities (AAA) AQ16_3624 PF16193 AAA C-terminal domain AQ16_3624 PF12002 MgsA AAA+ ATPase C terminal AQ16_3624 PF05496 Holliday junction DNA helicase RuvB P-loop domain AQ16_3625 PF02082 Transcriptional regulator AQ16_3626 PF00266 Aminotransferase class-V AQ16_3629 PF14490 Helix-hairpin-helix containing domain AQ16_3629 PF13538 UvrD-like helicase C-terminal domain AQ16_3629 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain AQ16_3633 PF01594 AI-2E family transporter AQ16_3635 PF01411 tRNA synthetases class II (A) AQ16_3635 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AQ16_3635 PF02272 DHHA1 domain AQ16_3636 PF06135 IreB regulatory phosphoprotein AQ16_3637 PF03652 Holliday junction resolvase AQ16_3638 PF06949 Protein of unknown function (DUF1292) AQ16_3639 PF02618 YceG-like family AQ16_364 PF00209 Sodium:neurotransmitter symporter family AQ16_3643 PF00485 Phosphoribulokinase / Uridine kinase family AQ16_3644 PF03449 Transcription elongation factor, N-terminal AQ16_3644 PF01272 Transcription elongation factor, GreA/GreB, C-term AQ16_3645 PF03717 Penicillin-binding Protein dimerisation domain AQ16_3645 PF00905 Penicillin binding protein transpeptidase domain AQ16_3648 PF08241 Methyltransferase domain AQ16_3649 PF01048 Phosphorylase superfamily AQ16_3650 PF00291 Pyridoxal-phosphate dependent enzyme AQ16_3651 PF01053 Cys/Met metabolism PLP-dependent enzyme AQ16_3652 PF00171 Aldehyde dehydrogenase family AQ16_3652 PF00465 Iron-containing alcohol dehydrogenase AQ16_3653 PF14143 YrhC-like protein AQ16_3654 PF01497 Periplasmic binding protein AQ16_3655 PF01032 FecCD transport family AQ16_3656 PF00005 ABC transporter AQ16_366 PF02595 Glycerate kinase family AQ16_3662 PF07681 DoxX AQ16_3663 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AQ16_3665 PF00351 Biopterin-dependent aromatic amino acid hydroxylase AQ16_3666 PF13860 FlgD Ig-like domain AQ16_3666 PF05922 Peptidase inhibitor I9 AQ16_3666 PF02225 PA domain AQ16_3666 PF00082 Subtilase family AQ16_367 PF01336 OB-fold nucleic acid binding domain AQ16_367 PF00152 tRNA synthetases class II (D, K and N) AQ16_3674 PF01526 Tn3 transposase DDE domain AQ16_3674 PF13700 Domain of unknown function (DUF4158) AQ16_3675 PF02796 Helix-turn-helix domain of resolvase AQ16_3675 PF00239 Resolvase, N terminal domain AQ16_3676 PF03845 Spore germination protein AQ16_3677 PF03323 Bacillus/Clostridium GerA spore germination protein AQ16_3678 PF05504 Spore germination B3/ GerAC like, C-terminal AQ16_3680 PF08386 TAP-like protein AQ16_3680 PF00561 alpha/beta hydrolase fold AQ16_3682 PF00245 Alkaline phosphatase AQ16_3684 PF04607 Region found in RelA / SpoT proteins AQ16_3685 PF00881 Nitroreductase family AQ16_3686 PF00471 Ribosomal protein L33 AQ16_3687 PF16244 Domain of unknown function (DUF4901) AQ16_3689 PF04542 Sigma-70 region 2 AQ16_3689 PF04545 Sigma-70, region 4 AQ16_3690 PF02666 Phosphatidylserine decarboxylase AQ16_3693 PF01926 50S ribosome-binding GTPase AQ16_3694 PF08501 Shikimate dehydrogenase substrate binding domain AQ16_3694 PF01488 Shikimate / quinate 5-dehydrogenase AQ16_3694 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AQ16_3695 PF01985 CRS1 / YhbY (CRM) domain AQ16_3696 PF01467 Cytidylyltransferase-like AQ16_3697 PF01966 HD domain AQ16_3699 PF13649 Methyltransferase domain AQ16_37 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal AQ16_37 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal AQ16_370 PF00133 tRNA synthetases class I (I, L, M and V) AQ16_370 PF08264 Anticodon-binding domain of tRNA AQ16_3700 PF03807 NADP oxidoreductase coenzyme F420-dependent AQ16_3700 PF14748 Pyrroline-5-carboxylate reductase dimerisation AQ16_3701 PF10531 SLBB domain AQ16_3702 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AQ16_3703 PF03772 Competence protein AQ16_3703 PF00753 Metallo-beta-lactamase superfamily AQ16_3703 PF13567 Domain of unknown function (DUF4131) AQ16_3704 PF14141 YqzM-like protein AQ16_3705 PF06144 DNA polymerase III, delta subunit AQ16_3706 PF01649 Ribosomal protein S20 AQ16_3707 PF03418 Germination protease AQ16_3709 PF06421 GTP-binding protein LepA C-terminus AQ16_3709 PF00679 Elongation factor G C-terminus AQ16_3709 PF00009 Elongation factor Tu GTP binding domain AQ16_3709 PF03144 Elongation factor Tu domain 2 AQ16_3710 PF01638 HxlR-like helix-turn-helix AQ16_3711 PF04055 Radical SAM superfamily AQ16_3711 PF06969 HemN C-terminal domain AQ16_3712 PF01628 HrcA protein C terminal domain AQ16_3713 PF01025 GrpE AQ16_3714 PF00012 Hsp70 protein AQ16_3715 PF00226 DnaJ domain AQ16_3715 PF01556 DnaJ C terminal domain AQ16_3715 PF00684 DnaJ central domain AQ16_3717 PF04452 RNA methyltransferase AQ16_3718 PF00919 Uncharacterized protein family UPF0004 AQ16_3718 PF01938 TRAM domain AQ16_3718 PF04055 Radical SAM superfamily AQ16_3719 PF01165 Ribosomal protein S21 AQ16_3720 PF09424 Yqey-like protein AQ16_3721 PF07873 YabP family AQ16_3722 PF06898 Putative stage IV sporulation protein YqfD AQ16_3723 PF02562 PhoH-like protein AQ16_3724 PF01966 HD domain AQ16_3724 PF07697 7TM-HD extracellular AQ16_3724 PF07698 7TM receptor with intracellular HD hydrolase AQ16_3725 PF02130 Uncharacterized protein family UPF0054 AQ16_3726 PF01219 Prokaryotic diacylglycerol kinase AQ16_3727 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AQ16_3728 PF01926 50S ribosome-binding GTPase AQ16_3728 PF07650 KH domain AQ16_3730 PF11967 Recombination protein O N terminal AQ16_3730 PF02565 Recombination protein O C terminal AQ16_3731 PF08279 HTH domain AQ16_3731 PF00571 CBS domain AQ16_3732 PF03618 Kinase/pyrophosphorylase AQ16_3733 PF10410 DnaB-helicase binding domain of primase AQ16_3733 PF08275 DNA primase catalytic core, N-terminal domain AQ16_3733 PF01807 CHC2 zinc finger AQ16_3734 PF04545 Sigma-70, region 4 AQ16_3734 PF03979 Sigma-70 factor, region 1.1 AQ16_3734 PF00140 Sigma-70 factor, region 1.2 AQ16_3734 PF04542 Sigma-70 region 2 AQ16_3734 PF04539 Sigma-70 region 3 AQ16_3735 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AQ16_3736 PF04816 tRNA (adenine(22)-N(1))-methyltransferase AQ16_3737 PF01784 NIF3 (NGG1p interacting factor 3) AQ16_3738 PF02401 LytB protein AQ16_374 PF03485 Arginyl tRNA synthetase N terminal domain AQ16_374 PF00750 tRNA synthetases class I (R) AQ16_374 PF05746 DALR anticodon binding domain AQ16_3740 PF00271 Helicase conserved C-terminal domain AQ16_3740 PF00270 DEAD/DEAH box helicase AQ16_3741 PF01261 Xylose isomerase-like TIM barrel AQ16_3742 PF11116 Protein of unknown function (DUF2624) AQ16_3743 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AQ16_3743 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 AQ16_3744 PF00005 ABC transporter AQ16_3745 PF00950 ABC 3 transport family AQ16_3746 PF01475 Ferric uptake regulator family AQ16_3747 PF04551 GcpE protein AQ16_375 PF04445 Putative SAM-dependent methyltransferase AQ16_3751 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AQ16_3751 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AQ16_3752 PF07690 Major Facilitator Superfamily AQ16_3754 PF12849 PBP superfamily domain AQ16_3755 PF00528 Binding-protein-dependent transport system inner membrane component AQ16_3756 PF00528 Binding-protein-dependent transport system inner membrane component AQ16_3757 PF00005 ABC transporter AQ16_3758 PF01895 PhoU domain AQ16_3759 PF00483 Nucleotidyl transferase AQ16_376 PF06491 Disulphide isomerase AQ16_3760 PF00471 Ribosomal protein L33 AQ16_3761 PF01812 5-formyltetrahydrofolate cyclo-ligase family AQ16_3762 PF06014 Bacterial protein of unknown function (DUF910) AQ16_3763 PF00480 ROK family AQ16_3764 PF10958 Protein of unknown function (DUF2759) AQ16_3765 PF00753 Metallo-beta-lactamase superfamily AQ16_3767 PF01022 Bacterial regulatory protein, arsR family AQ16_3769 PF01053 Cys/Met metabolism PLP-dependent enzyme AQ16_3770 PF01053 Cys/Met metabolism PLP-dependent enzyme AQ16_3771 PF02574 Homocysteine S-methyltransferase AQ16_3771 PF02219 Methylenetetrahydrofolate reductase AQ16_3772 PF02965 Vitamin B12 dependent methionine synthase, activation domain AQ16_3772 PF00809 Pterin binding enzyme AQ16_3772 PF02574 Homocysteine S-methyltransferase AQ16_3772 PF02310 B12 binding domain AQ16_3772 PF02607 B12 binding domain AQ16_3773 PF03033 Glycosyltransferase family 28 N-terminal domain AQ16_3773 PF04101 Glycosyltransferase family 28 C-terminal domain AQ16_378 PF13769 Virulence factor AQ16_378 PF08712 Scaffold protein Nfu/NifU N terminal AQ16_3780 PF00375 Sodium:dicarboxylate symporter family AQ16_3781 PF11117 Protein of unknown function (DUF2626) AQ16_3783 PF00437 Type II/IV secretion system protein AQ16_3785 PF01609 Transposase DDE domain AQ16_3786 PF00482 Type II secretion system (T2SS), protein F AQ16_3788 PF07963 Prokaryotic N-terminal methylation motif AQ16_379 PF00436 Single-strand binding protein family AQ16_3793 PF01202 Shikimate kinase AQ16_3794 PF14038 YqzE-like protein AQ16_3799 PF11079 Bacterial protein YqhG of unknown function AQ16_3800 PF00271 Helicase conserved C-terminal domain AQ16_3800 PF00176 SNF2 family N-terminal domain AQ16_3801 PF08669 Glycine cleavage T-protein C-terminal barrel domain AQ16_3801 PF01571 Aminomethyltransferase folate-binding domain AQ16_3802 PF02347 Glycine cleavage system P-protein AQ16_3803 PF02347 Glycine cleavage system P-protein AQ16_3806 PF00392 Bacterial regulatory proteins, gntR family AQ16_3807 PF00005 ABC transporter AQ16_3814 PF00893 Small Multidrug Resistance protein AQ16_3815 PF00893 Small Multidrug Resistance protein AQ16_3817 PF00356 Bacterial regulatory proteins, lacI family AQ16_3817 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AQ16_3819 PF00581 Rhodanese-like domain AQ16_382 PF16326 ABC transporter C-terminal domain AQ16_382 PF12848 ABC transporter AQ16_382 PF00005 ABC transporter AQ16_3820 PF03099 Biotin/lipoate A/B protein ligase family AQ16_3824 PF01609 Transposase DDE domain AQ16_3827 PF01325 Iron dependent repressor, N-terminal DNA binding domain AQ16_3827 PF02742 Iron dependent repressor, metal binding and dimerisation domain AQ16_3829 PF13419 Haloacid dehalogenase-like hydrolase AQ16_383 PF01966 HD domain AQ16_3830 PF07136 Protein of unknown function (DUF1385) AQ16_3831 PF11085 Conserved membrane protein YqhR AQ16_3832 PF01220 Dehydroquinase class II AQ16_3833 PF01321 Creatinase/Prolidase N-terminal domain AQ16_3833 PF00557 Metallopeptidase family M24 AQ16_3834 PF08207 Elongation factor P (EF-P) KOW-like domain AQ16_3834 PF09285 Elongation factor P, C-terminal AQ16_3834 PF01132 Elongation factor P (EF-P) OB domain AQ16_3839 PF09548 Stage III sporulation protein AB (spore_III_AB) AQ16_3840 PF06686 Stage III sporulation protein AC/AD protein family AQ16_3841 PF06686 Stage III sporulation protein AC/AD protein family AQ16_3842 PF09546 Stage III sporulation protein AE (spore_III_AE) AQ16_3843 PF09581 Stage III sporulation protein AF (Spore_III_AF) AQ16_3845 PF12685 SpoIIIAH-like protein AQ16_3847 PF00364 Biotin-requiring enzyme AQ16_3848 PF02785 Biotin carboxylase C-terminal domain AQ16_3848 PF00289 Biotin carboxylase, N-terminal domain AQ16_3848 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AQ16_3849 PF03780 Asp23 family, cell envelope-related function AQ16_385 PF04232 Stage V sporulation protein S (SpoVS) AQ16_3850 PF01029 NusB family AQ16_3851 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AQ16_3851 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AQ16_3852 PF02601 Exonuclease VII, large subunit AQ16_3852 PF13742 OB-fold nucleic acid binding domain AQ16_3853 PF02609 Exonuclease VII small subunit AQ16_3854 PF00348 Polyprenyl synthetase AQ16_3855 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AQ16_3855 PF02779 Transketolase, pyrimidine binding domain AQ16_3855 PF02780 Transketolase, C-terminal domain AQ16_3856 PF01479 S4 domain AQ16_3856 PF01728 FtsJ-like methyltransferase AQ16_3857 PF02863 Arginine repressor, C-terminal domain AQ16_3857 PF01316 Arginine repressor, DNA binding domain AQ16_3858 PF13476 AAA domain AQ16_3859 PF17820 PDZ domain AQ16_3859 PF05580 SpoIVB peptidase S55 AQ16_3860 PF08769 Sporulation initiation factor Spo0A C terminal AQ16_3860 PF00072 Response regulator receiver domain AQ16_3863 PF01609 Transposase DDE domain AQ16_3864 PF01609 Transposase DDE domain AQ16_3867 PF01609 Transposase DDE domain AQ16_3869 PF01609 Transposase DDE domain AQ16_3874 PF14174 YycC-like protein AQ16_3875 PF03009 Glycerophosphoryl diester phosphodiesterase family AQ16_3877 PF00158 Sigma-54 interaction domain AQ16_3877 PF00989 PAS fold AQ16_3877 PF02954 Bacterial regulatory protein, Fis family AQ16_3878 PF01515 Phosphate acetyl/butaryl transferase AQ16_3879 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AQ16_3879 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AQ16_3880 PF00871 Acetokinase family AQ16_3881 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AQ16_3881 PF07992 Pyridine nucleotide-disulphide oxidoreductase AQ16_3882 PF00676 Dehydrogenase E1 component AQ16_3883 PF02780 Transketolase, C-terminal domain AQ16_3883 PF02779 Transketolase, pyrimidine binding domain AQ16_3884 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AQ16_3884 PF00364 Biotin-requiring enzyme AQ16_3884 PF02817 e3 binding domain AQ16_3885 PF01098 Cell cycle protein AQ16_3886 PF04239 Protein of unknown function (DUF421) AQ16_3887 PF00293 NUDIX domain AQ16_3887 PF09297 NADH pyrophosphatase zinc ribbon domain AQ16_3888 PF11208 Protein of unknown function (DUF2992) AQ16_3889 PF06491 Disulphide isomerase AQ16_3890 PF00497 Bacterial extracellular solute-binding proteins, family 3 AQ16_3891 PF00528 Binding-protein-dependent transport system inner membrane component AQ16_3892 PF00005 ABC transporter AQ16_3893 PF11728 Putative aromatic acid exporter C-terminal domain AQ16_3893 PF06081 Aromatic acid exporter family member 1 AQ16_3894 PF03734 L,D-transpeptidase catalytic domain AQ16_3896 PF13302 Acetyltransferase (GNAT) domain AQ16_3897 PF01546 Peptidase family M20/M25/M40 AQ16_3897 PF07687 Peptidase dimerisation domain AQ16_3899 PF11798 IMS family HHH motif AQ16_3899 PF11799 impB/mucB/samB family C-terminal domain AQ16_3899 PF00817 impB/mucB/samB family AQ16_39 PF00392 Bacterial regulatory proteins, gntR family AQ16_39 PF00155 Aminotransferase class I and II AQ16_3900 PF02308 MgtC family AQ16_3901 PF00690 Cation transporter/ATPase, N-terminus AQ16_3901 PF00689 Cation transporting ATPase, C-terminus AQ16_3903 PF12706 Beta-lactamase superfamily domain AQ16_3903 PF00753 Metallo-beta-lactamase superfamily AQ16_3904 PF03315 Serine dehydratase beta chain AQ16_3904 PF01842 ACT domain AQ16_3905 PF03313 Serine dehydratase alpha chain AQ16_3906 PF14748 Pyrroline-5-carboxylate reductase dimerisation AQ16_3906 PF03807 NADP oxidoreductase coenzyme F420-dependent AQ16_3907 PF00753 Metallo-beta-lactamase superfamily AQ16_3908 PF00106 short chain dehydrogenase AQ16_391 PF01814 Hemerythrin HHE cation binding domain AQ16_391 PF04405 Domain of Unknown function (DUF542) AQ16_3910 PF02774 Semialdehyde dehydrogenase, dimerisation domain AQ16_3910 PF01118 Semialdehyde dehydrogenase, NAD binding domain AQ16_3911 PF01960 ArgJ family AQ16_3912 PF00696 Amino acid kinase family AQ16_3913 PF00202 Aminotransferase class-III AQ16_3914 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AQ16_3914 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AQ16_3917 PF01037 Lrp/AsnC ligand binding domain AQ16_3917 PF13404 AsnC-type helix-turn-helix domain AQ16_3919 PF02872 5'-nucleotidase, C-terminal domain AQ16_3919 PF00149 Calcineurin-like phosphoesterase AQ16_392 PF18267 Rubredoxin NAD+ reductase C-terminal domain AQ16_392 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AQ16_392 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AQ16_392 PF04324 BFD-like [2Fe-2S] binding domain AQ16_392 PF07992 Pyridine nucleotide-disulphide oxidoreductase AQ16_3922 PF00202 Aminotransferase class-III AQ16_3924 PF00155 Aminotransferase class I and II AQ16_3925 PF08241 Methyltransferase domain AQ16_3925 PF12697 Alpha/beta hydrolase family AQ16_3926 PF13847 Methyltransferase domain AQ16_3927 PF04055 Radical SAM superfamily AQ16_3927 PF06968 Biotin and Thiamin Synthesis associated domain AQ16_3929 PF00885 6,7-dimethyl-8-ribityllumazine synthase AQ16_393 PF00355 Rieske [2Fe-2S] domain AQ16_3930 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AQ16_3930 PF00925 GTP cyclohydrolase II AQ16_3931 PF00677 Lumazine binding domain AQ16_3932 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AQ16_3932 PF01872 RibD C-terminal domain AQ16_3934 PF10827 Protein of unknown function (DUF2552) AQ16_3935 PF12146 Serine aminopeptidase, S33 AQ16_3936 PF00583 Acetyltransferase (GNAT) family AQ16_3937 PF00356 Bacterial regulatory proteins, lacI family AQ16_3938 PF13726 Na+-H+ antiporter family AQ16_3938 PF03553 Na+/H+ antiporter family AQ16_3939 PF12146 Serine aminopeptidase, S33 AQ16_394 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AQ16_3941 PF02872 5'-nucleotidase, C-terminal domain AQ16_3941 PF00746 LPXTG cell wall anchor motif AQ16_3941 PF00149 Calcineurin-like phosphoesterase AQ16_3941 PF00565 Staphylococcal nuclease homologue AQ16_3943 PF13673 Acetyltransferase (GNAT) domain AQ16_3943 PF04229 GrpB protein AQ16_3944 PF00248 Aldo/keto reductase family AQ16_3945 PF00248 Aldo/keto reductase family AQ16_3946 PF13072 Mother cell inhibitor of FtsZ AQ16_3947 PF00293 NUDIX domain AQ16_3949 PF01944 Stage II sporulation protein M AQ16_395 PF01903 CbiX AQ16_3950 PF01475 Ferric uptake regulator family AQ16_3951 PF14004 Protein of unknown function (DUF4227) AQ16_3952 PF00589 Phage integrase family AQ16_3952 PF02899 Phage integrase, N-terminal SAM-like domain AQ16_3953 PF13115 YtkA-like AQ16_3954 PF01676 Metalloenzyme superfamily AQ16_3955 PF01048 Phosphorylase superfamily AQ16_3956 PF02885 Glycosyl transferase family, helical bundle domain AQ16_3956 PF00591 Glycosyl transferase family, a/b domain AQ16_3956 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain AQ16_3957 PF01544 CorA-like Mg2+ transporter protein AQ16_3958 PF00860 Permease family AQ16_3960 PF01047 MarR family AQ16_3964 PF00005 ABC transporter AQ16_3965 PF00392 Bacterial regulatory proteins, gntR family AQ16_3966 PF00768 D-alanyl-D-alanine carboxypeptidase AQ16_3966 PF07943 Penicillin-binding protein 5, C-terminal domain AQ16_3967 PF01740 STAS domain AQ16_3968 PF13581 Histidine kinase-like ATPase domain AQ16_3969 PF04539 Sigma-70 region 3 AQ16_3969 PF04545 Sigma-70, region 4 AQ16_3969 PF04542 Sigma-70 region 2 AQ16_3970 PF00209 Sodium:neurotransmitter symporter family AQ16_3972 PF12164 Stage V sporulation protein AA AQ16_3973 PF13782 Stage V sporulation protein AB AQ16_3974 PF03862 SpoVAC/SpoVAEB sporulation membrane protein AQ16_3975 PF07451 Stage V sporulation protein AD (SpoVAD) AQ16_3976 PF03862 SpoVAC/SpoVAEB sporulation membrane protein AQ16_3977 PF14097 Stage V sporulation protein AE1 AQ16_3978 PF03323 Bacillus/Clostridium GerA spore germination protein AQ16_3980 PF06207 Protein of unknown function (DUF1002) AQ16_3981 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AQ16_3982 PF00583 Acetyltransferase (GNAT) family AQ16_3983 PF03745 Domain of unknown function (DUF309) AQ16_3985 PF02616 Segregation and condensation protein ScpA AQ16_3986 PF04079 Segregation and condensation complex subunit ScpB AQ16_3988 PF01979 Amidohydrolase family AQ16_3989 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AQ16_3992 PF00874 PRD domain AQ16_3992 PF03123 CAT RNA binding domain AQ16_3993 PF00367 phosphotransferase system, EIIB AQ16_3993 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AQ16_3993 PF02378 Phosphotransferase system, EIIC AQ16_3994 PF00381 PTS HPr component phosphorylation site AQ16_3995 PF05524 PEP-utilising enzyme, N-terminal AQ16_3995 PF02896 PEP-utilising enzyme, TIM barrel domain AQ16_3995 PF00391 PEP-utilising enzyme, mobile domain AQ16_3998 PF00881 Nitroreductase family AQ16_3999 PF00990 Diguanylate cyclase, GGDEF domain AQ16_400 PF07690 Major Facilitator Superfamily AQ16_4000 PF00144 Beta-lactamase AQ16_4001 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AQ16_4001 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AQ16_4004 PF03079 ARD/ARD' family AQ16_4005 PF00596 Class II Aldolase and Adducin N-terminal domain AQ16_4007 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain AQ16_4007 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain AQ16_4008 PF00155 Aminotransferase class I and II AQ16_4009 PF00795 Carbon-nitrogen hydrolase AQ16_4010 PF01636 Phosphotransferase enzyme family AQ16_4011 PF01008 Initiation factor 2 subunit family AQ16_4014 PF03551 Transcriptional regulator PadR-like family AQ16_402 PF02391 MoaE protein AQ16_4020 PF00293 NUDIX domain AQ16_4021 PF00108 Thiolase, N-terminal domain AQ16_4021 PF02803 Thiolase, C-terminal domain AQ16_4022 PF02463 RecF/RecN/SMC N terminal domain AQ16_4029 PF17912 MalK OB fold domain AQ16_4029 PF00005 ABC transporter AQ16_4029 PF03459 TOBE domain AQ16_403 PF03453 MoeA N-terminal region (domain I and II) AQ16_403 PF00994 Probable molybdopterin binding domain AQ16_403 PF03454 MoeA C-terminal region (domain IV) AQ16_4030 PF16657 Maltogenic Amylase, C-terminal domain AQ16_4030 PF00128 Alpha amylase, catalytic domain AQ16_4031 PF00128 Alpha amylase, catalytic domain AQ16_4031 PF16657 Maltogenic Amylase, C-terminal domain AQ16_4031 PF02903 Alpha amylase, N-terminal ig-like domain AQ16_4032 PF13416 Bacterial extracellular solute-binding protein AQ16_4033 PF00528 Binding-protein-dependent transport system inner membrane component AQ16_4034 PF00528 Binding-protein-dependent transport system inner membrane component AQ16_4035 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AQ16_4035 PF00356 Bacterial regulatory proteins, lacI family AQ16_4036 PF00155 Aminotransferase class I and II AQ16_4038 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ16_4038 PF00512 His Kinase A (phospho-acceptor) domain AQ16_404 PF00899 ThiF family AQ16_4040 PF14040 Deoxyribonuclease NucA/NucB AQ16_4042 PF08267 Cobalamin-independent synthase, N-terminal domain AQ16_4042 PF01717 Cobalamin-independent synthase, Catalytic domain AQ16_4043 PF13344 Haloacid dehalogenase-like hydrolase AQ16_4043 PF00293 NUDIX domain AQ16_4048 PF07690 Major Facilitator Superfamily AQ16_405 PF06463 Molybdenum Cofactor Synthesis C AQ16_405 PF04055 Radical SAM superfamily AQ16_4054 PF14177 YkyB-like protein AQ16_4055 PF02541 Ppx/GppA phosphatase family AQ16_4056 PF13089 Polyphosphate kinase N-terminal domain AQ16_4056 PF17941 Polyphosphate kinase C-terminal domain 1 AQ16_4056 PF13090 Polyphosphate kinase C-terminal domain 2 AQ16_4056 PF02503 Polyphosphate kinase middle domain AQ16_4058 PF00149 Calcineurin-like phosphoesterase AQ16_4058 PF10518 TAT (twin-arginine translocation) pathway signal sequence AQ16_406 PF00027 Cyclic nucleotide-binding domain AQ16_406 PF00325 Bacterial regulatory proteins, crp family AQ16_4060 PF00563 EAL domain AQ16_4060 PF10388 EAL-domain associated signalling protein domain AQ16_4063 PF08796 Protein of unknown function (DUF1797) AQ16_4065 PF04308 Ribonuclease H-like AQ16_4068 PF03466 LysR substrate binding domain AQ16_4068 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AQ16_4069 PF14602 Hexapeptide repeat of succinyl-transferase AQ16_4069 PF00132 Bacterial transferase hexapeptide (six repeats) AQ16_4069 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal AQ16_4070 PF01546 Peptidase family M20/M25/M40 AQ16_4070 PF07687 Peptidase dimerisation domain AQ16_4072 PF02254 TrkA-N domain AQ16_4072 PF02080 TrkA-C domain AQ16_4073 PF17770 Ribonuclease J C-terminal domain AQ16_4073 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AQ16_4073 PF00753 Metallo-beta-lactamase superfamily AQ16_4076 PF01327 Polypeptide deformylase AQ16_4078 PF00676 Dehydrogenase E1 component AQ16_4079 PF02779 Transketolase, pyrimidine binding domain AQ16_4079 PF02780 Transketolase, C-terminal domain AQ16_408 PF00005 ABC transporter AQ16_4080 PF02817 e3 binding domain AQ16_4080 PF00364 Biotin-requiring enzyme AQ16_4080 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AQ16_4081 PF07992 Pyridine nucleotide-disulphide oxidoreductase AQ16_4081 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AQ16_4089 PF01276 Orn/Lys/Arg decarboxylase, major domain AQ16_4089 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain AQ16_409 PF00155 Aminotransferase class I and II AQ16_409 PF00392 Bacterial regulatory proteins, gntR family AQ16_4090 PF05256 Uncharacterised protein family (UPF0223) AQ16_4091 PF06335 Protein of unknown function (DUF1054) AQ16_4093 PF00459 Inositol monophosphatase family AQ16_4096 PF14036 YlaH-like protein AQ16_4098 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) AQ16_4100 PF02562 PhoH-like protein AQ16_4100 PF13638 PIN domain AQ16_4102 PF07408 Protein of unknown function (DUF1507) AQ16_4103 PF01098 Cell cycle protein AQ16_4104 PF00364 Biotin-requiring enzyme AQ16_4104 PF00289 Biotin carboxylase, N-terminal domain AQ16_4104 PF02436 Conserved carboxylase domain AQ16_4104 PF00682 HMGL-like AQ16_4104 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AQ16_4104 PF02785 Biotin carboxylase C-terminal domain AQ16_4105 PF02628 Cytochrome oxidase assembly protein AQ16_4106 PF01040 UbiA prenyltransferase family AQ16_4107 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AQ16_4107 PF00034 Cytochrome c AQ16_4107 PF02790 Cytochrome C oxidase subunit II, transmembrane domain AQ16_4108 PF00115 Cytochrome C and Quinol oxidase polypeptide I AQ16_4109 PF00510 Cytochrome c oxidase subunit III AQ16_411 PF02665 Nitrate reductase gamma subunit AQ16_4110 PF03626 Prokaryotic Cytochrome C oxidase subunit IV AQ16_4111 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) AQ16_4112 PF08868 YugN-like family AQ16_4113 PF00188 Cysteine-rich secretory protein family AQ16_4113 PF14504 CAP-associated N-terminal AQ16_4114 PF14071 Putative coat protein AQ16_4115 PF14003 YlbE-like protein AQ16_4116 PF00300 Histidine phosphatase superfamily (branch 1) AQ16_4117 PF06133 Control of competence regulator ComK, YlbF/YmcA AQ16_4118 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) AQ16_412 PF02613 Nitrate reductase delta subunit AQ16_4121 PF07670 Nucleoside recognition AQ16_4122 PF01467 Cytidylyltransferase-like AQ16_4123 PF01734 Patatin-like phospholipase AQ16_4124 PF05362 Lon protease (S16) C-terminal proteolytic domain AQ16_4124 PF13180 PDZ domain AQ16_4125 PF05636 HIGH Nucleotidyl Transferase AQ16_4126 PF02620 Large ribosomal RNA subunit accumulation protein YceD AQ16_4127 PF01783 Ribosomal L32p protein family AQ16_4129 PF00583 Acetyltransferase (GNAT) family AQ16_413 PF13247 4Fe-4S dicluster domain AQ16_413 PF14711 Respiratory nitrate reductase beta C-terminal AQ16_4130 PF08546 Ketopantoate reductase PanE/ApbA C terminal AQ16_4130 PF02558 Ketopantoate reductase PanE/ApbA AQ16_4131 PF10079 Bacillithiol biosynthesis BshC AQ16_4132 PF01795 MraW methylase family AQ16_4133 PF04977 Septum formation initiator AQ16_4135 PF03793 PASTA domain AQ16_4135 PF00905 Penicillin binding protein transpeptidase domain AQ16_4135 PF03717 Penicillin-binding Protein dimerisation domain AQ16_4136 PF01225 Mur ligase family, catalytic domain AQ16_4136 PF02875 Mur ligase family, glutamate ligase domain AQ16_4136 PF08245 Mur ligase middle domain AQ16_4137 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 AQ16_4137 PF00953 Glycosyl transferase family 4 AQ16_4138 PF02875 Mur ligase family, glutamate ligase domain AQ16_4138 PF08245 Mur ligase middle domain AQ16_4139 PF01098 Cell cycle protein AQ16_414 PF00384 Molybdopterin oxidoreductase AQ16_414 PF01568 Molydopterin dinucleotide binding domain AQ16_414 PF14710 Respiratory nitrate reductase alpha N-terminal AQ16_4140 PF04101 Glycosyltransferase family 28 C-terminal domain AQ16_4140 PF03033 Glycosyltransferase family 28 N-terminal domain AQ16_4141 PF01565 FAD binding domain AQ16_4141 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AQ16_4142 PF08478 POTRA domain, FtsQ-type AQ16_4142 PF03799 Cell division protein FtsQ AQ16_4143 PF02491 SHS2 domain inserted in FTSA AQ16_4144 PF00091 Tubulin/FtsZ family, GTPase domain AQ16_4144 PF12327 FtsZ family, C-terminal domain AQ16_4145 PF03419 Sporulation factor SpoIIGA AQ16_4146 PF04542 Sigma-70 region 2 AQ16_4146 PF04545 Sigma-70, region 4 AQ16_4147 PF04542 Sigma-70 region 2 AQ16_4147 PF04539 Sigma-70 region 3 AQ16_4147 PF04545 Sigma-70, region 4 AQ16_4148 PF05239 PRC-barrel domain AQ16_415 PF07726 ATPase family associated with various cellular activities (AAA) AQ16_415 PF17863 AAA lid domain AQ16_4150 PF01168 Alanine racemase, N-terminal domain AQ16_4151 PF04472 Cell division protein SepF AQ16_4152 PF02325 YGGT family AQ16_4153 PF01479 S4 domain AQ16_4153 PF17774 Putative RNA-binding domain in YlmH AQ16_4154 PF05103 DivIVA protein AQ16_4155 PF06827 Zinc finger found in FPG and IleRS AQ16_4155 PF08264 Anticodon-binding domain of tRNA AQ16_4155 PF00133 tRNA synthetases class I (I, L, M and V) AQ16_4157 PF01252 Signal peptidase (SPase) II AQ16_4158 PF00849 RNA pseudouridylate synthase AQ16_4158 PF01479 S4 domain AQ16_4159 PF00156 Phosphoribosyl transferase domain AQ16_416 PF01882 Protein of unknown function DUF58 AQ16_4160 PF00860 Permease family AQ16_4161 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AQ16_4161 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AQ16_4162 PF01979 Amidohydrolase family AQ16_4163 PF00117 Glutamine amidotransferase class-I AQ16_4163 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AQ16_4164 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AQ16_4164 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AQ16_4164 PF02142 MGS-like domain AQ16_4165 PF00175 Oxidoreductase NAD-binding domain AQ16_4165 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B AQ16_4166 PF01180 Dihydroorotate dehydrogenase AQ16_4167 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AQ16_4168 PF00156 Phosphoribosyl transferase domain AQ16_417 PF01841 Transglutaminase-like superfamily AQ16_417 PF13559 Domain of unknown function (DUF4129) AQ16_417 PF11992 Domain of unknown function (DUF3488) AQ16_4173 PF01321 Creatinase/Prolidase N-terminal domain AQ16_4173 PF00557 Metallopeptidase family M24 AQ16_4176 PF00690 Cation transporter/ATPase, N-terminus AQ16_4176 PF00689 Cation transporting ATPase, C-terminus AQ16_4177 PF03755 YicC-like family, N-terminal region AQ16_4177 PF08340 Domain of unknown function (DUF1732) AQ16_4178 PF04025 Domain of unknown function (DUF370) AQ16_4179 PF00625 Guanylate kinase AQ16_418 PF00255 Glutathione peroxidase AQ16_4180 PF01192 RNA polymerase Rpb6 AQ16_4181 PF04127 DNA / pantothenate metabolism flavoprotein AQ16_4181 PF02441 Flavoprotein AQ16_4182 PF04851 Type III restriction enzyme, res subunit AQ16_4182 PF18319 PriA DNA helicase Cys-rich region (CRR) domain AQ16_4182 PF00271 Helicase conserved C-terminal domain AQ16_4182 PF17764 3′ DNA-binding domain (3′BD) AQ16_4182 PF18074 Primosomal protein N C-terminal domain AQ16_4183 PF01327 Polypeptide deformylase AQ16_4184 PF02911 Formyl transferase, C-terminal domain AQ16_4184 PF00551 Formyl transferase AQ16_4185 PF01189 16S rRNA methyltransferase RsmB/F AQ16_4185 PF01029 NusB family AQ16_4186 PF04055 Radical SAM superfamily AQ16_4188 PF03793 PASTA domain AQ16_4188 PF00069 Protein kinase domain AQ16_4189 PF03193 RsgA GTPase AQ16_4189 PF16745 RsgA N-terminal domain AQ16_4190 PF00834 Ribulose-phosphate 3 epimerase family AQ16_4191 PF04263 Thiamin pyrophosphokinase, catalytic domain AQ16_4191 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain AQ16_4192 PF00830 Ribosomal L28 family AQ16_4193 PF03780 Asp23 family, cell envelope-related function AQ16_4194 PF13684 Dihydroxyacetone kinase family AQ16_4194 PF02734 DAK2 domain AQ16_4195 PF00271 Helicase conserved C-terminal domain AQ16_4195 PF17191 RecG wedge domain AQ16_4195 PF00270 DEAD/DEAH box helicase AQ16_4196 PF03061 Thioesterase superfamily AQ16_4197 PF02504 Fatty acid synthesis protein AQ16_4198 PF00698 Acyl transferase domain AQ16_42 PF12833 Helix-turn-helix domain AQ16_4200 PF00550 Phosphopantetheine attachment site AQ16_4201 PF00035 Double-stranded RNA binding motif AQ16_4201 PF14622 Ribonuclease-III-like AQ16_4202 PF06470 SMC proteins Flexible Hinge Domain AQ16_4202 PF02463 RecF/RecN/SMC N terminal domain AQ16_4203 PF00448 SRP54-type protein, GTPase domain AQ16_4203 PF02881 SRP54-type protein, helical bundle domain AQ16_4204 PF04297 Putative helix-turn-helix protein, YlxM / p13 like AQ16_4205 PF02978 Signal peptide binding domain AQ16_4205 PF00448 SRP54-type protein, GTPase domain AQ16_4205 PF02881 SRP54-type protein, helical bundle domain AQ16_4206 PF00886 Ribosomal protein S16 AQ16_4208 PF05239 PRC-barrel domain AQ16_4208 PF01782 RimM N-terminal domain AQ16_4209 PF01746 tRNA (Guanine-1)-methyltransferase AQ16_4210 PF01245 Ribosomal protein L19 AQ16_4211 PF10502 Signal peptidase, peptidase S26 AQ16_4212 PF01926 50S ribosome-binding GTPase AQ16_4213 PF01351 Ribonuclease HII AQ16_4214 PF00549 CoA-ligase AQ16_4214 PF08442 ATP-grasp domain AQ16_4215 PF02629 CoA binding domain AQ16_4215 PF00549 CoA-ligase AQ16_4216 PF02481 DNA recombination-mediator protein A AQ16_4217 PF01131 DNA topoisomerase AQ16_4217 PF01396 Topoisomerase DNA binding C4 zinc finger AQ16_4217 PF01751 Toprim domain AQ16_4218 PF01134 Glucose inhibited division protein A AQ16_4219 PF00589 Phage integrase family AQ16_4219 PF02899 Phage integrase, N-terminal SAM-like domain AQ16_422 PF03109 ABC1 family AQ16_4220 PF00227 Proteasome subunit AQ16_4221 PF00004 ATPase family associated with various cellular activities (AAA) AQ16_4221 PF07724 AAA domain (Cdc48 subfamily) AQ16_4221 PF10431 C-terminal, D2-small domain, of ClpB protein AQ16_4222 PF06018 CodY GAF-like domain AQ16_4222 PF08222 CodY helix-turn-helix domain AQ16_4223 PF00318 Ribosomal protein S2 AQ16_4224 PF00889 Elongation factor TS AQ16_4225 PF00696 Amino acid kinase family AQ16_4226 PF01765 Ribosome recycling factor AQ16_4227 PF01255 Putative undecaprenyl diphosphate synthase AQ16_4229 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AQ16_4229 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain AQ16_4229 PF13288 DXP reductoisomerase C-terminal domain AQ16_4230 PF17820 PDZ domain AQ16_4230 PF02163 Peptidase family M50 AQ16_4231 PF03129 Anticodon binding domain AQ16_4231 PF04073 Aminoacyl-tRNA editing domain AQ16_4231 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AQ16_4232 PF00929 Exonuclease AQ16_4232 PF02811 PHP domain AQ16_4232 PF14480 DNA polymerase III polC-type N-terminus I AQ16_4232 PF14579 Helix-hairpin-helix motif AQ16_4232 PF11490 DNA polymerase III polC-type N-terminus II AQ16_4232 PF07733 Bacterial DNA polymerase III alpha NTPase domain AQ16_4232 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AQ16_4233 PF02576 RimP N-terminal domain AQ16_4233 PF17384 RimP C-terminal SH3 domain AQ16_4234 PF00575 S1 RNA binding domain AQ16_4234 PF08529 NusA N-terminal domain AQ16_4234 PF13184 NusA-like KH domain AQ16_4235 PF04296 Protein of unknown function (DUF448) AQ16_4236 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family AQ16_4237 PF00009 Elongation factor Tu GTP binding domain AQ16_4237 PF11987 Translation-initiation factor 2 AQ16_4237 PF04760 Translation initiation factor IF-2, N-terminal region AQ16_4238 PF04456 Protein of unknown function (DUF503) AQ16_4239 PF02033 Ribosome-binding factor A AQ16_4240 PF01509 TruB family pseudouridylate synthase (N terminal domain) AQ16_4240 PF16198 tRNA pseudouridylate synthase B C-terminal domain AQ16_4241 PF06574 FAD synthetase AQ16_4241 PF01687 Riboflavin kinase AQ16_4242 PF00312 Ribosomal protein S15 AQ16_4243 PF00013 KH domain AQ16_4243 PF03725 3' exoribonuclease family, domain 2 AQ16_4243 PF01138 3' exoribonuclease family, domain 1 AQ16_4243 PF00575 S1 RNA binding domain AQ16_4243 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AQ16_4244 PF01522 Polysaccharide deacetylase AQ16_4245 PF00675 Insulinase (Peptidase family M16) AQ16_4245 PF05193 Peptidase M16 inactive domain AQ16_4246 PF05239 PRC-barrel domain AQ16_4247 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AQ16_4247 PF16924 Dipicolinate synthase subunit A N-terminal domain AQ16_4248 PF02441 Flavoprotein AQ16_425 PF08281 Sigma-70, region 4 AQ16_425 PF04542 Sigma-70 region 2 AQ16_4257 PF01118 Semialdehyde dehydrogenase, NAD binding domain AQ16_4257 PF02774 Semialdehyde dehydrogenase, dimerisation domain AQ16_4258 PF00696 Amino acid kinase family AQ16_4258 PF13840 ACT domain AQ16_4259 PF00701 Dihydrodipicolinate synthetase family AQ16_426 PF08240 Alcohol dehydrogenase GroES-like domain AQ16_426 PF00107 Zinc-binding dehydrogenase AQ16_4260 PF00753 Metallo-beta-lactamase superfamily AQ16_4260 PF17770 Ribonuclease J C-terminal domain AQ16_4260 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AQ16_4261 PF00574 Clp protease AQ16_4262 PF14035 YlzJ-like protein AQ16_4263 PF17854 FtsK alpha domain AQ16_4263 PF01580 FtsK/SpoIIIE family AQ16_4263 PF09397 Ftsk gamma domain AQ16_4264 PF07702 UTRA domain AQ16_4264 PF00392 Bacterial regulatory proteins, gntR family AQ16_4269 PF05193 Peptidase M16 inactive domain AQ16_4270 PF00675 Insulinase (Peptidase family M16) AQ16_4270 PF05193 Peptidase M16 inactive domain AQ16_4272 PF11588 Protein of unknown function (DUF3243) AQ16_4273 PF11868 Protein of unknown function (DUF3388) AQ16_4274 PF13464 Domain of unknown function (DUF4115) AQ16_4275 PF01066 CDP-alcohol phosphatidyltransferase AQ16_4276 PF00994 Probable molybdopterin binding domain AQ16_4276 PF18146 Damage-inducible protein CinA KH domain AQ16_4276 PF02464 Competence-damaged protein AQ16_4277 PF00154 recA bacterial DNA recombination protein AQ16_4278 PF12072 Domain of unknown function (DUF3552) AQ16_4278 PF00013 KH domain AQ16_4278 PF01966 HD domain AQ16_4279 PF13277 YmdB-like protein AQ16_428 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AQ16_4280 PF04232 Stage V sporulation protein S (SpoVS) AQ16_4281 PF01244 Membrane dipeptidase (Peptidase family M19) AQ16_4282 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg AQ16_4282 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase AQ16_4282 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II AQ16_4283 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AQ16_4284 PF01938 TRAM domain AQ16_4284 PF00919 Uncharacterized protein family UPF0004 AQ16_4284 PF04055 Radical SAM superfamily AQ16_4285 PF06133 Control of competence regulator ComK, YlbF/YmcA AQ16_4286 PF10628 Outer spore coat protein E (CotE) AQ16_4287 PF01624 MutS domain I AQ16_4287 PF00488 MutS domain V AQ16_4287 PF05190 MutS family domain IV AQ16_4287 PF05192 MutS domain III AQ16_4287 PF05188 MutS domain II AQ16_4288 PF01119 DNA mismatch repair protein, C-terminal domain AQ16_4288 PF08676 MutL C terminal dimerisation domain AQ16_429 PF00271 Helicase conserved C-terminal domain AQ16_429 PF00270 DEAD/DEAH box helicase AQ16_4290 PF00005 ABC transporter AQ16_4293 PF00486 Transcriptional regulatory protein, C terminal AQ16_4293 PF00072 Response regulator receiver domain AQ16_4294 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ16_4294 PF00512 His Kinase A (phospho-acceptor) domain AQ16_4295 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family AQ16_4297 PF00350 Dynamin family AQ16_4298 PF00884 Sulfatase AQ16_43 PF01636 Phosphotransferase enzyme family AQ16_4300 PF07486 Cell Wall Hydrolase AQ16_4301 PF00082 Subtilase family AQ16_4304 PF00232 Glycosyl hydrolase family 1 AQ16_4305 PF00392 Bacterial regulatory proteins, gntR family AQ16_4305 PF07702 UTRA domain AQ16_4307 PF02585 GlcNAc-PI de-N-acetylase AQ16_4308 PF00561 alpha/beta hydrolase fold AQ16_4309 PF00392 Bacterial regulatory proteins, gntR family AQ16_4309 PF00155 Aminotransferase class I and II AQ16_431 PF01268 Formate--tetrahydrofolate ligase AQ16_4310 PF03788 LrgA family AQ16_4311 PF04172 LrgB-like family AQ16_4312 PF10787 Uncharacterised protein from bacillus cereus group AQ16_4313 PF02567 Phenazine biosynthesis-like protein AQ16_4315 PF02719 Polysaccharide biosynthesis protein AQ16_4315 PF08485 Polysaccharide biosynthesis protein C-terminal AQ16_4316 PF16363 GDP-mannose 4,6 dehydratase AQ16_4318 PF04101 Glycosyltransferase family 28 C-terminal domain AQ16_4318 PF03033 Glycosyltransferase family 28 N-terminal domain AQ16_4319 PF00990 Diguanylate cyclase, GGDEF domain AQ16_4319 PF03707 Bacterial signalling protein N terminal repeat AQ16_4319 PF00563 EAL domain AQ16_432 PF01209 ubiE/COQ5 methyltransferase family AQ16_4324 PF01546 Peptidase family M20/M25/M40 AQ16_4324 PF07687 Peptidase dimerisation domain AQ16_4325 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain AQ16_4325 PF00730 HhH-GPD superfamily base excision DNA repair protein AQ16_4326 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AQ16_4326 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AQ16_4327 PF12833 Helix-turn-helix domain AQ16_4327 PF02805 Metal binding domain of Ada AQ16_4328 PF03372 Endonuclease/Exonuclease/phosphatase family AQ16_4329 PF01497 Periplasmic binding protein AQ16_4330 PF01032 FecCD transport family AQ16_4331 PF01032 FecCD transport family AQ16_4332 PF00005 ABC transporter AQ16_4333 PF00756 Putative esterase AQ16_4335 PF02583 Metal-sensitive transcriptional repressor AQ16_4336 PF00403 Heavy-metal-associated domain AQ16_4337 PF00403 Heavy-metal-associated domain AQ16_4339 PF00216 Bacterial DNA-binding protein AQ16_4340 PF01226 Formate/nitrite transporter AQ16_4341 PF10518 TAT (twin-arginine translocation) pathway signal sequence AQ16_4341 PF00149 Calcineurin-like phosphoesterase AQ16_4342 PF00704 Glycosyl hydrolases family 18 AQ16_4342 PF00041 Fibronectin type III domain AQ16_4343 PF00324 Amino acid permease AQ16_4346 PF04238 Protein of unknown function (DUF420) AQ16_4347 PF00465 Iron-containing alcohol dehydrogenase AQ16_4348 PF00455 DeoR C terminal sensor domain AQ16_4348 PF08220 DeoR-like helix-turn-helix domain AQ16_4349 PF00294 pfkB family carbohydrate kinase AQ16_4350 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AQ16_4350 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AQ16_4351 PF01476 LysM domain AQ16_4351 PF06725 3D domain AQ16_4354 PF17209 Hfq protein AQ16_4356 PF13276 HTH-like domain AQ16_4356 PF13333 Integrase core domain AQ16_4356 PF00665 Integrase core domain AQ16_4361 PF00004 ATPase family associated with various cellular activities (AAA) AQ16_4361 PF17866 AAA lid domain AQ16_4363 PF03458 UPF0126 domain AQ16_4364 PF01926 50S ribosome-binding GTPase AQ16_4364 PF16360 GTP-binding GTPase Middle Region AQ16_4364 PF13167 GTP-binding GTPase N-terminal AQ16_4365 PF06838 Methionine gamma-lyase AQ16_4366 PF13411 MerR HTH family regulatory protein AQ16_4367 PF00120 Glutamine synthetase, catalytic domain AQ16_4367 PF03951 Glutamine synthetase, beta-Grasp domain AQ16_437 PF09579 Sporulation protein YtfJ (Spore_YtfJ) AQ16_4373 PF03551 Transcriptional regulator PadR-like family AQ16_4376 PF00717 Peptidase S24-like AQ16_4376 PF01726 LexA DNA binding domain AQ16_4377 PF00239 Resolvase, N terminal domain AQ16_4378 PF05979 Bacterial protein of unknown function (DUF896) AQ16_4379 PF00149 Calcineurin-like phosphoesterase AQ16_4379 PF02872 5'-nucleotidase, C-terminal domain AQ16_4380 PF00497 Bacterial extracellular solute-binding proteins, family 3 AQ16_4381 PF00005 ABC transporter AQ16_4382 PF00528 Binding-protein-dependent transport system inner membrane component AQ16_4383 PF00528 Binding-protein-dependent transport system inner membrane component AQ16_4384 PF00456 Transketolase, thiamine diphosphate binding domain AQ16_4384 PF02779 Transketolase, pyrimidine binding domain AQ16_4384 PF02780 Transketolase, C-terminal domain AQ16_4385 PF10747 Sporulation inhibitor of replication protein SirA AQ16_4386 PF03672 Uncharacterised protein family (UPF0154) AQ16_4387 PF00005 ABC transporter AQ16_4387 PF00664 ABC transporter transmembrane region AQ16_4388 PF00664 ABC transporter transmembrane region AQ16_4388 PF00005 ABC transporter AQ16_4391 PF01510 N-acetylmuramoyl-L-alanine amidase AQ16_4391 PF01471 Putative peptidoglycan binding domain AQ16_4393 PF01925 Sulfite exporter TauE/SafE AQ16_4395 PF13344 Haloacid dehalogenase-like hydrolase AQ16_4395 PF00293 NUDIX domain AQ16_4396 PF04172 LrgB-like family AQ16_4397 PF03788 LrgA family AQ16_4398 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AQ16_4398 PF03466 LysR substrate binding domain AQ16_4400 PF00005 ABC transporter AQ16_4404 PF02683 Cytochrome C biogenesis protein transmembrane region AQ16_4405 PF07301 Protein of unknown function (DUF1453) AQ16_4408 PF11084 Protein of unknown function (DUF2621) AQ16_4412 PF01209 ubiE/COQ5 methyltransferase family AQ16_4413 PF09021 HutP AQ16_4414 PF00221 Aromatic amino acid lyase AQ16_4415 PF17392 Urocanase C-terminal domain AQ16_4415 PF01175 Urocanase Rossmann-like domain AQ16_4415 PF17391 Urocanase N-terminal domain AQ16_4416 PF01979 Amidohydrolase family AQ16_4417 PF00491 Arginase family AQ16_4418 PF02559 CarD-like/TRCF domain AQ16_4419 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AQ16_4420 PF01645 Conserved region in glutamate synthase AQ16_4422 PF00474 Sodium:solute symporter family AQ16_4423 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AQ16_4424 PF01738 Dienelactone hydrolase family AQ16_4425 PF00989 PAS fold AQ16_4425 PF13426 PAS domain AQ16_4425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ16_4425 PF00512 His Kinase A (phospho-acceptor) domain AQ16_4425 PF13188 PAS domain AQ16_4427 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AQ16_4427 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 AQ16_4432 PF05532 CsbD-like AQ16_4435 PF01381 Helix-turn-helix AQ16_4436 PF00005 ABC transporter AQ16_4438 PF13193 AMP-binding enzyme C-terminal domain AQ16_4438 PF00501 AMP-binding enzyme AQ16_4439 PF02632 BioY family AQ16_444 PF00583 Acetyltransferase (GNAT) family AQ16_4440 PF13193 AMP-binding enzyme C-terminal domain AQ16_4440 PF00501 AMP-binding enzyme AQ16_4441 PF00108 Thiolase, N-terminal domain AQ16_4441 PF02803 Thiolase, C-terminal domain AQ16_4443 PF13344 Haloacid dehalogenase-like hydrolase AQ16_4443 PF00293 NUDIX domain AQ16_4444 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AQ16_4444 PF01411 tRNA synthetases class II (A) AQ16_4444 PF02272 DHHA1 domain AQ16_4446 PF07690 Major Facilitator Superfamily AQ16_4448 PF08179 Small acid-soluble spore protein P family AQ16_4450 PF01522 Polysaccharide deacetylase AQ16_4452 PF00694 Aconitase C-terminal domain AQ16_4452 PF00330 Aconitase family (aconitate hydratase) AQ16_4453 PF03412 Peptidase C39 family AQ16_4453 PF00005 ABC transporter AQ16_4453 PF00664 ABC transporter transmembrane region AQ16_4455 PF00578 AhpC/TSA family AQ16_4456 PF00929 Exonuclease AQ16_4456 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AQ16_4456 PF14579 Helix-hairpin-helix motif AQ16_4456 PF01336 OB-fold nucleic acid binding domain AQ16_4456 PF11490 DNA polymerase III polC-type N-terminus II AQ16_4456 PF02811 PHP domain AQ16_4456 PF07733 Bacterial DNA polymerase III alpha NTPase domain AQ16_4457 PF13040 Fur-regulated basic protein B AQ16_4458 PF08177 Small acid-soluble spore protein N family AQ16_4460 PF00704 Glycosyl hydrolases family 18 AQ16_4460 PF01476 LysM domain AQ16_4461 PF03061 Thioesterase superfamily AQ16_4462 PF01521 Iron-sulphur cluster biosynthesis AQ16_4463 PF02660 Glycerol-3-phosphate acyltransferase AQ16_4464 PF03477 ATP cone domain AQ16_4464 PF13597 Anaerobic ribonucleoside-triphosphate reductase AQ16_4466 PF00486 Transcriptional regulatory protein, C terminal AQ16_4466 PF00072 Response regulator receiver domain AQ16_4467 PF13180 PDZ domain AQ16_4468 PF13380 CoA binding domain AQ16_4469 PF00204 DNA gyrase B AQ16_4469 PF01751 Toprim domain AQ16_4469 PF00986 DNA gyrase B subunit, carboxyl terminus AQ16_4469 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ16_4470 PF03989 DNA gyrase C-terminal domain, beta-propeller AQ16_4470 PF00521 DNA gyrase/topoisomerase IV, subunit A AQ16_4471 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AQ16_4471 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AQ16_4475 PF00005 ABC transporter AQ16_4475 PF13732 Domain of unknown function (DUF4162) AQ16_4477 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AQ16_4478 PF08281 Sigma-70, region 4 AQ16_4478 PF04542 Sigma-70 region 2 AQ16_4480 PF03816 Cell envelope-related transcriptional attenuator domain AQ16_4481 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AQ16_4483 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AQ16_4484 PF00899 ThiF family AQ16_4486 PF08241 Methyltransferase domain AQ16_4493 PF13520 Amino acid permease AQ16_4496 PF03323 Bacillus/Clostridium GerA spore germination protein AQ16_4497 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AQ16_4497 PF00384 Molybdopterin oxidoreductase AQ16_4497 PF00037 4Fe-4S binding domain AQ16_4497 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AQ16_4497 PF01568 Molydopterin dinucleotide binding domain AQ16_4498 PF07849 Protein of unknown function (DUF1641) AQ16_4499 PF10057 Uncharacterized conserved protein (DUF2294) AQ16_450 PF00155 Aminotransferase class I and II AQ16_450 PF00392 Bacterial regulatory proteins, gntR family AQ16_4500 PF02634 FdhD/NarQ family AQ16_4501 PF04055 Radical SAM superfamily AQ16_4501 PF06463 Molybdenum Cofactor Synthesis C AQ16_4502 PF01226 Formate/nitrite transporter AQ16_4503 PF00899 ThiF family AQ16_4504 PF00994 Probable molybdopterin binding domain AQ16_4504 PF03453 MoeA N-terminal region (domain I and II) AQ16_4504 PF03454 MoeA C-terminal region (domain IV) AQ16_4505 PF02391 MoaE protein AQ16_4507 PF10609 NUBPL iron-transfer P-loop NTPase AQ16_451 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 AQ16_451 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AQ16_4510 PF06961 Protein of unknown function (DUF1294) AQ16_4511 PF00892 EamA-like transporter family AQ16_4512 PF02681 Divergent PAP2 family AQ16_4513 PF13243 Squalene-hopene cyclase C-terminal domain AQ16_4513 PF13249 Squalene-hopene cyclase N-terminal domain AQ16_4516 PF00171 Aldehyde dehydrogenase family AQ16_4518 PF00474 Sodium:solute symporter family AQ16_4519 PF01156 Inosine-uridine preferring nucleoside hydrolase AQ16_452 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase AQ16_4521 PF00206 Lyase AQ16_4521 PF14698 Argininosuccinate lyase C-terminal AQ16_4523 PF00106 short chain dehydrogenase AQ16_4526 PF00293 NUDIX domain AQ16_4528 PF00258 Flavodoxin AQ16_4530 PF00313 'Cold-shock' DNA-binding domain AQ16_4533 PF13037 Domain of unknown function (DUF3898) AQ16_4533 PF13039 Protein of unknown function (DUF3900) AQ16_4535 PF04294 VanW like protein AQ16_4536 PF00528 Binding-protein-dependent transport system inner membrane component AQ16_4537 PF00005 ABC transporter AQ16_4538 PF00497 Bacterial extracellular solute-binding proteins, family 3 AQ16_4539 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AQ16_4541 PF00899 ThiF family AQ16_4542 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AQ16_4545 PF02308 MgtC family AQ16_4546 PF18496 Collagenase G catalytic helper subdomain AQ16_4546 PF01752 Collagenase AQ16_4546 PF08453 Peptidase family M9 N-terminal AQ16_4548 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ16_4548 PF00989 PAS fold AQ16_4548 PF00512 His Kinase A (phospho-acceptor) domain AQ16_4551 PF01022 Bacterial regulatory protein, arsR family AQ16_4552 PF01520 N-acetylmuramoyl-L-alanine amidase AQ16_4552 PF00395 S-layer homology domain AQ16_4553 PF07968 Leukocidin/Hemolysin toxin family AQ16_4554 PF00440 Bacterial regulatory proteins, tetR family AQ16_4557 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AQ16_4560 PF01609 Transposase DDE domain AQ16_4561 PF02913 FAD linked oxidases, C-terminal domain AQ16_4561 PF01565 FAD binding domain AQ16_4562 PF01758 Sodium Bile acid symporter family AQ16_4565 PF04299 Putative FMN-binding domain AQ16_4566 PF18801 response regulator aspartate phosphatase H, N terminal AQ16_4568 PF02696 Uncharacterized ACR, YdiU/UPF0061 family AQ16_4569 PF00107 Zinc-binding dehydrogenase AQ16_4569 PF08240 Alcohol dehydrogenase GroES-like domain AQ16_457 PF01168 Alanine racemase, N-terminal domain AQ16_457 PF00842 Alanine racemase, C-terminal domain AQ16_4570 PF01022 Bacterial regulatory protein, arsR family AQ16_4571 PF01494 FAD binding domain AQ16_4572 PF03009 Glycerophosphoryl diester phosphodiesterase family AQ16_4575 PF03466 LysR substrate binding domain AQ16_4575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AQ16_4576 PF07690 Major Facilitator Superfamily AQ16_4578 PF00144 Beta-lactamase AQ16_4580 PF04371 Porphyromonas-type peptidyl-arginine deiminase AQ16_4584 PF04371 Porphyromonas-type peptidyl-arginine deiminase AQ16_4585 PF08439 Oligopeptidase F AQ16_4585 PF01432 Peptidase family M3 AQ16_4586 PF00797 N-acetyltransferase AQ16_4587 PF09154 Domain of unknown function (DUF1939) AQ16_4587 PF00128 Alpha amylase, catalytic domain AQ16_4589 PF00488 MutS domain V AQ16_4589 PF01713 Smr domain AQ16_4592 PF08240 Alcohol dehydrogenase GroES-like domain AQ16_4592 PF00107 Zinc-binding dehydrogenase AQ16_4593 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AQ16_4593 PF03466 LysR substrate binding domain AQ16_4595 PF10901 Protein of unknown function (DUF2690) AQ16_460 PF00300 Histidine phosphatase superfamily (branch 1) AQ16_4600 PF05675 Protein of unknown function (DUF817) AQ16_4601 PF01032 FecCD transport family AQ16_4602 PF01032 FecCD transport family AQ16_4603 PF01497 Periplasmic binding protein AQ16_4606 PF03600 Citrate transporter AQ16_4607 PF08830 Protein of unknown function (DUF1806) AQ16_4608 PF02585 GlcNAc-PI de-N-acetylase AQ16_4611 PF07690 Major Facilitator Superfamily AQ16_4612 PF00324 Amino acid permease AQ16_4613 PF08240 Alcohol dehydrogenase GroES-like domain AQ16_4613 PF00107 Zinc-binding dehydrogenase AQ16_4614 PF03551 Transcriptional regulator PadR-like family AQ16_4617 PF00753 Metallo-beta-lactamase superfamily AQ16_4626 PF00144 Beta-lactamase AQ16_4629 PF12650 Domain of unknown function (DUF3784) AQ16_4631 PF00753 Metallo-beta-lactamase superfamily AQ16_4633 PF03063 Prismane/CO dehydrogenase family AQ16_4636 PF13732 Domain of unknown function (DUF4162) AQ16_4636 PF00005 ABC transporter AQ16_4637 PF01061 ABC-2 type transporter AQ16_4638 PF05656 Protein of unknown function (DUF805) AQ16_464 PF01145 SPFH domain / Band 7 family AQ16_4642 PF01810 LysE type translocator AQ16_4643 PF00535 Glycosyl transferase family 2 AQ16_4643 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 AQ16_4644 PF04542 Sigma-70 region 2 AQ16_4645 PF12791 Anti-sigma factor N-terminus AQ16_4646 PF01522 Polysaccharide deacetylase AQ16_4646 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain AQ16_4647 PF01022 Bacterial regulatory protein, arsR family AQ16_4651 PF01638 HxlR-like helix-turn-helix AQ16_4652 PF02525 Flavodoxin-like fold AQ16_4653 PF13193 AMP-binding enzyme C-terminal domain AQ16_4653 PF00501 AMP-binding enzyme AQ16_4654 PF13302 Acetyltransferase (GNAT) domain AQ16_4658 PF02567 Phenazine biosynthesis-like protein AQ16_466 PF07690 Major Facilitator Superfamily AQ16_4665 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AQ16_4665 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AQ16_4666 PF00392 Bacterial regulatory proteins, gntR family AQ16_4666 PF07702 UTRA domain AQ16_4667 PF03960 ArsC family AQ16_4674 PF03928 Haem-degrading AQ16_4676 PF00550 Phosphopantetheine attachment site AQ16_4676 PF14765 Polyketide synthase dehydratase AQ16_4676 PF08240 Alcohol dehydrogenase GroES-like domain AQ16_4676 PF08659 KR domain AQ16_4676 PF00698 Acyl transferase domain AQ16_4676 PF02801 Beta-ketoacyl synthase, C-terminal domain AQ16_4676 PF00109 Beta-ketoacyl synthase, N-terminal domain AQ16_4676 PF00107 Zinc-binding dehydrogenase AQ16_4676 PF16197 Ketoacyl-synthetase C-terminal extension AQ16_4678 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain AQ16_4678 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain AQ16_4679 PF02780 Transketolase, C-terminal domain AQ16_4679 PF00456 Transketolase, thiamine diphosphate binding domain AQ16_4679 PF02779 Transketolase, pyrimidine binding domain AQ16_4680 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain AQ16_4680 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AQ16_4681 PF00923 Transaldolase/Fructose-6-phosphate aldolase AQ16_4682 PF02447 GntP family permease AQ16_4683 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AQ16_4683 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AQ16_4684 PF10282 Lactonase, 7-bladed beta-propeller AQ16_4685 PF06906 Protein of unknown function (DUF1272) AQ16_4686 PF00805 Pentapeptide repeats (8 copies) AQ16_4687 PF00892 EamA-like transporter family AQ16_4688 PF01370 NAD dependent epimerase/dehydratase family AQ16_469 PF02557 D-alanyl-D-alanine carboxypeptidase AQ16_4690 PF08421 Putative zinc binding domain AQ16_4690 PF08484 C-methyltransferase C-terminal domain AQ16_4691 PF16363 GDP-mannose 4,6 dehydratase AQ16_4692 PF00483 Nucleotidyl transferase AQ16_4694 PF13411 MerR HTH family regulatory protein AQ16_4695 PF00571 CBS domain AQ16_4695 PF03471 Transporter associated domain AQ16_4695 PF01595 Cyclin M transmembrane N-terminal domain AQ16_4697 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AQ16_47 PF13847 Methyltransferase domain AQ16_4701 PF07690 Major Facilitator Superfamily AQ16_4703 PF08003 Protein of unknown function (DUF1698) AQ16_4709 PF01594 AI-2E family transporter AQ16_471 PF07454 Stage II sporulation protein P (SpoIIP) AQ16_4711 PF00579 tRNA synthetases class I (W and Y) AQ16_4713 PF02687 FtsX-like permease family AQ16_4713 PF12704 MacB-like periplasmic core domain AQ16_4713 PF00005 ABC transporter AQ16_4715 PF14602 Hexapeptide repeat of succinyl-transferase AQ16_4715 PF12464 Maltose acetyltransferase AQ16_4716 PF00480 ROK family AQ16_4717 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AQ16_4718 PF00293 NUDIX domain AQ16_4718 PF13344 Haloacid dehalogenase-like hydrolase AQ16_4724 PF13419 Haloacid dehalogenase-like hydrolase AQ16_4729 PF00005 ABC transporter AQ16_4735 PF00391 PEP-utilising enzyme, mobile domain AQ16_4735 PF02887 Pyruvate kinase, alpha/beta domain AQ16_4735 PF00224 Pyruvate kinase, barrel domain AQ16_4737 PF00881 Nitroreductase family AQ16_4738 PF01638 HxlR-like helix-turn-helix AQ16_474 PF01588 Putative tRNA binding domain AQ16_4741 PF03129 Anticodon binding domain AQ16_4741 PF13393 Histidyl-tRNA synthetase AQ16_4742 PF04073 Aminoacyl-tRNA editing domain AQ16_4748 PF13411 MerR HTH family regulatory protein AQ16_4748 PF07739 TipAS antibiotic-recognition domain AQ16_475 PF05525 Branched-chain amino acid transport protein AQ16_4750 PF00440 Bacterial regulatory proteins, tetR family AQ16_4751 PF07690 Major Facilitator Superfamily AQ16_4752 PF01048 Phosphorylase superfamily AQ16_4754 PF04231 Endonuclease I AQ16_4755 PF03606 C4-dicarboxylate anaerobic carrier AQ16_4756 PF03737 Aldolase/RraA AQ16_4759 PF02361 Cobalt transport protein AQ16_4760 PF00005 ABC transporter AQ16_4762 PF14256 YwiC-like protein AQ16_4766 PF02525 Flavodoxin-like fold AQ16_4768 PF02667 Short chain fatty acid transporter AQ16_4769 PF01289 Thiol-activated cytolysin AQ16_4769 PF17440 Thiol-activated cytolysin beta sandwich domain AQ16_4770 PF00440 Bacterial regulatory proteins, tetR family AQ16_4771 PF00893 Small Multidrug Resistance protein AQ16_4772 PF17314 Family of unknown function (DUF5360) AQ16_4774 PF13396 Phospholipase_D-nuclease N-terminal AQ16_4775 PF13732 Domain of unknown function (DUF4162) AQ16_4775 PF00005 ABC transporter AQ16_4776 PF12679 ABC-2 family transporter protein AQ16_4779 PF07690 Major Facilitator Superfamily AQ16_478 PF01595 Cyclin M transmembrane N-terminal domain AQ16_478 PF03471 Transporter associated domain AQ16_478 PF00571 CBS domain AQ16_4780 PF01047 MarR family AQ16_4781 PF12697 Alpha/beta hydrolase family AQ16_4783 PF07690 Major Facilitator Superfamily AQ16_4784 PF14044 NETI protein AQ16_4786 PF09587 Bacterial capsule synthesis protein PGA_cap AQ16_4787 PF02557 D-alanyl-D-alanine carboxypeptidase AQ16_479 PF04306 Protein of unknown function (DUF456) AQ16_4794 PF01510 N-acetylmuramoyl-L-alanine amidase AQ16_4794 PF01471 Putative peptidoglycan binding domain AQ16_4794 PF01476 LysM domain AQ16_4796 PF01804 Penicillin amidase AQ16_4797 PF00196 Bacterial regulatory proteins, luxR family AQ16_4797 PF00072 Response regulator receiver domain AQ16_480 PF13460 NAD(P)H-binding AQ16_4803 PF00266 Aminotransferase class-V AQ16_4804 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AQ16_4804 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AQ16_4804 PF01842 ACT domain AQ16_4808 PF17676 LD-carboxypeptidase C-terminal domain AQ16_4808 PF02016 LD-carboxypeptidase N-terminal domain AQ16_4811 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AQ16_4811 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 AQ16_4812 PF00486 Transcriptional regulatory protein, C terminal AQ16_4812 PF00072 Response regulator receiver domain AQ16_4813 PF00672 HAMP domain AQ16_4813 PF00512 His Kinase A (phospho-acceptor) domain AQ16_4813 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ16_4816 PF02687 FtsX-like permease family AQ16_4817 PF00005 ABC transporter AQ16_4820 PF04072 Leucine carboxyl methyltransferase AQ16_4824 PF01381 Helix-turn-helix AQ16_4826 PF00144 Beta-lactamase AQ16_4829 PF00291 Pyridoxal-phosphate dependent enzyme AQ16_483 PF13091 PLD-like domain AQ16_483 PF13396 Phospholipase_D-nuclease N-terminal AQ16_4835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ16_4835 PF00672 HAMP domain AQ16_4835 PF00512 His Kinase A (phospho-acceptor) domain AQ16_4836 PF00072 Response regulator receiver domain AQ16_4836 PF00486 Transcriptional regulatory protein, C terminal AQ16_484 PF03061 Thioesterase superfamily AQ16_4842 PF07690 Major Facilitator Superfamily AQ16_4843 PF00667 FAD binding domain AQ16_4843 PF00258 Flavodoxin AQ16_4843 PF00067 Cytochrome P450 AQ16_4843 PF00175 Oxidoreductase NAD-binding domain AQ16_4844 PF13302 Acetyltransferase (GNAT) domain AQ16_4845 PF08241 Methyltransferase domain AQ16_485 PF09323 Domain of unknown function (DUF1980) AQ16_4850 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AQ16_4854 PF01037 Lrp/AsnC ligand binding domain AQ16_4856 PF00440 Bacterial regulatory proteins, tetR family AQ16_4857 PF07690 Major Facilitator Superfamily AQ16_4858 PF18665 Tetracyclin repressor-like, C-terminal domain AQ16_4858 PF00440 Bacterial regulatory proteins, tetR family AQ16_486 PF03773 Predicted permease AQ16_4861 PF01609 Transposase DDE domain AQ16_4862 PF01609 Transposase DDE domain AQ16_4866 PF01022 Bacterial regulatory protein, arsR family AQ16_4867 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AQ16_4868 PF01758 Sodium Bile acid symporter family AQ16_4869 PF01451 Low molecular weight phosphotyrosine protein phosphatase AQ16_4871 PF12746 GNAT acetyltransferase AQ16_4874 PF12833 Helix-turn-helix domain AQ16_4874 PF01965 DJ-1/PfpI family AQ16_4875 PF04397 LytTr DNA-binding domain AQ16_4875 PF00072 Response regulator receiver domain AQ16_4876 PF07730 Histidine kinase AQ16_4876 PF05384 Sensor protein DegS AQ16_4876 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ16_4877 PF02687 FtsX-like permease family AQ16_4878 PF00005 ABC transporter AQ16_4879 PF12996 DUF based on E. rectale Gene description (DUF3880) AQ16_488 PF01943 Polysaccharide biosynthesis protein AQ16_488 PF14667 Polysaccharide biosynthesis C-terminal domain AQ16_4880 PF01040 UbiA prenyltransferase family AQ16_4884 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AQ16_4884 PF03466 LysR substrate binding domain AQ16_4885 PF07690 Major Facilitator Superfamily AQ16_4887 PF07690 Major Facilitator Superfamily AQ16_4888 PF10057 Uncharacterized conserved protein (DUF2294) AQ16_4889 PF00361 Proton-conducting membrane transporter AQ16_4889 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AQ16_489 PF09335 SNARE associated Golgi protein AQ16_4890 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) AQ16_4892 PF07859 alpha/beta hydrolase fold AQ16_4894 PF07690 Major Facilitator Superfamily AQ16_4896 PF00875 DNA photolyase AQ16_4896 PF03441 FAD binding domain of DNA photolyase AQ16_4897 PF03073 TspO/MBR family AQ16_49 PF07690 Major Facilitator Superfamily AQ16_490 PF00293 NUDIX domain AQ16_4903 PF11181 Heat induced stress protein YflT AQ16_4906 PF01544 CorA-like Mg2+ transporter protein AQ16_4907 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AQ16_4907 PF03466 LysR substrate binding domain AQ16_4908 PF01979 Amidohydrolase family AQ16_491 PF08757 CotH kinase protein AQ16_4911 PF00857 Isochorismatase family AQ16_4912 PF00561 alpha/beta hydrolase fold AQ16_4913 PF02872 5'-nucleotidase, C-terminal domain AQ16_4913 PF17936 Bacterial Ig domain AQ16_4913 PF00149 Calcineurin-like phosphoesterase AQ16_4918 PF01235 Sodium:alanine symporter family AQ16_4920 PF04960 Glutaminase AQ16_4921 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ16_4922 PF00072 Response regulator receiver domain AQ16_4922 PF08664 YcbB domain AQ16_4923 PF03323 Bacillus/Clostridium GerA spore germination protein AQ16_4924 PF03845 Spore germination protein AQ16_4925 PF05504 Spore germination B3/ GerAC like, C-terminal AQ16_4926 PF14748 Pyrroline-5-carboxylate reductase dimerisation AQ16_4926 PF03807 NADP oxidoreductase coenzyme F420-dependent AQ16_4927 PF13520 Amino acid permease AQ16_4928 PF08459 UvrC Helix-hairpin-helix N-terminal AQ16_4928 PF02151 UvrB/uvrC motif AQ16_4928 PF12826 Helix-hairpin-helix motif AQ16_4928 PF01541 GIY-YIG catalytic domain AQ16_4929 PF17853 GGDEF-like domain AQ16_4929 PF12833 Helix-turn-helix domain AQ16_493 PF00300 Histidine phosphatase superfamily (branch 1) AQ16_4932 PF05791 Bacillus haemolytic enterotoxin (HBL) AQ16_4933 PF05791 Bacillus haemolytic enterotoxin (HBL) AQ16_4934 PF00512 His Kinase A (phospho-acceptor) domain AQ16_4934 PF00989 PAS fold AQ16_4934 PF13188 PAS domain AQ16_4934 PF13426 PAS domain AQ16_4934 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ16_4935 PF03323 Bacillus/Clostridium GerA spore germination protein AQ16_4936 PF03845 Spore germination protein AQ16_4937 PF05504 Spore germination B3/ GerAC like, C-terminal AQ16_4938 PF01381 Helix-turn-helix AQ16_4939 PF00710 Asparaginase, N-terminal AQ16_4939 PF17763 Glutaminase/Asparaginase C-terminal domain AQ16_4940 PF00206 Lyase AQ16_4940 PF10415 Fumarase C C-terminus AQ16_4942 PF13823 Alcohol dehydrogenase GroES-associated AQ16_4942 PF00107 Zinc-binding dehydrogenase AQ16_4942 PF08240 Alcohol dehydrogenase GroES-like domain AQ16_4943 PF00269 Small, acid-soluble spore proteins, alpha/beta type AQ16_4944 PF11553 Protein of unknown function (DUF3231) AQ16_4945 PF10710 Protein of unknown function (DUF2512) AQ16_4946 PF00753 Metallo-beta-lactamase superfamily AQ16_4948 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AQ16_4948 PF00391 PEP-utilising enzyme, mobile domain AQ16_4949 PF00440 Bacterial regulatory proteins, tetR family AQ16_495 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AQ16_4951 PF02915 Rubrerythrin AQ16_4954 PF00395 S-layer homology domain AQ16_4954 PF01520 N-acetylmuramoyl-L-alanine amidase AQ16_4959 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AQ16_4959 PF02770 Acyl-CoA dehydrogenase, middle domain AQ16_4959 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AQ16_496 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AQ16_4962 PF07454 Stage II sporulation protein P (SpoIIP) AQ16_4963 PF03932 CutC family AQ16_4964 PF10502 Signal peptidase, peptidase S26 AQ16_4965 PF09339 IclR helix-turn-helix domain AQ16_4965 PF01614 Bacterial transcriptional regulator AQ16_4966 PF02682 Carboxyltransferase domain, subdomain C and D AQ16_4967 PF02626 Carboxyltransferase domain, subdomain A and B AQ16_4968 PF03746 LamB/YcsF family AQ16_4971 PF01470 Pyroglutamyl peptidase AQ16_4973 PF02146 Sir2 family AQ16_4976 PF10502 Signal peptidase, peptidase S26 AQ16_4978 PF00293 NUDIX domain AQ16_498 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AQ16_498 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AQ16_4981 PF06445 GyrI-like small molecule binding domain AQ16_4981 PF13411 MerR HTH family regulatory protein AQ16_4982 PF08713 DNA alkylation repair enzyme AQ16_4984 PF00324 Amino acid permease AQ16_4986 PF01925 Sulfite exporter TauE/SafE AQ16_499 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AQ16_4992 PF13031 Protein of unknown function (DUF3892) AQ16_4993 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 AQ16_4994 PF00392 Bacterial regulatory proteins, gntR family AQ16_4994 PF00155 Aminotransferase class I and II AQ16_4995 PF00892 EamA-like transporter family AQ16_4998 PF00583 Acetyltransferase (GNAT) family AQ16_4999 PF12833 Helix-turn-helix domain AQ16_500 PF13460 NAD(P)H-binding AQ16_5004 PF00392 Bacterial regulatory proteins, gntR family AQ16_5005 PF00005 ABC transporter AQ16_5008 PF00293 NUDIX domain AQ16_5010 PF03764 Elongation factor G, domain IV AQ16_5010 PF14492 Elongation Factor G, domain II AQ16_5010 PF00679 Elongation factor G C-terminus AQ16_5010 PF00009 Elongation factor Tu GTP binding domain AQ16_5011 PF01047 MarR family AQ16_5012 PF00881 Nitroreductase family AQ16_5014 PF01022 Bacterial regulatory protein, arsR family AQ16_5016 PF00916 Sulfate permease family AQ16_5016 PF01740 STAS domain AQ16_5017 PF03831 PhnA domain AQ16_5017 PF08274 PhnA Zinc-Ribbon AQ16_5019 PF07726 ATPase family associated with various cellular activities (AAA) AQ16_5019 PF17863 AAA lid domain AQ16_502 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment AQ16_502 PF01297 Zinc-uptake complex component A periplasmic AQ16_5023 PF00144 Beta-lactamase AQ16_5024 PF13382 Adenine deaminase C-terminal domain AQ16_5024 PF01979 Amidohydrolase family AQ16_5026 PF06628 Catalase-related immune-responsive AQ16_5026 PF00199 Catalase AQ16_5027 PF00202 Aminotransferase class-III AQ16_5028 PF07690 Major Facilitator Superfamily AQ16_503 PF00583 Acetyltransferase (GNAT) family AQ16_5031 PF07726 ATPase family associated with various cellular activities (AAA) AQ16_5031 PF17863 AAA lid domain AQ16_5035 PF12681 Glyoxalase-like domain AQ16_5036 PF13302 Acetyltransferase (GNAT) domain AQ16_504 PF02492 CobW/HypB/UreG, nucleotide-binding domain AQ16_504 PF07683 Cobalamin synthesis protein cobW C-terminal domain AQ16_5041 PF10086 YhfC intramembrane metalloprotease AQ16_5044 PF13443 Cro/C1-type HTH DNA-binding domain AQ16_5045 PF11188 Protein of unknown function (DUF2975) AQ16_5046 PF00245 Alkaline phosphatase AQ16_5047 PF05547 Immune inhibitor A peptidase M6 AQ16_5048 PF00487 Fatty acid desaturase AQ16_5049 PF01139 tRNA-splicing ligase RtcB AQ16_505 PF00248 Aldo/keto reductase family AQ16_5050 PF00324 Amino acid permease AQ16_5051 PF01614 Bacterial transcriptional regulator AQ16_5051 PF09339 IclR helix-turn-helix domain AQ16_5052 PF01546 Peptidase family M20/M25/M40 AQ16_5053 PF03807 NADP oxidoreductase coenzyme F420-dependent AQ16_5053 PF14748 Pyrroline-5-carboxylate reductase dimerisation AQ16_5054 PF00696 Amino acid kinase family AQ16_5054 PF01472 PUA domain AQ16_5055 PF00171 Aldehyde dehydrogenase family AQ16_5056 PF01773 Na+ dependent nucleoside transporter N-terminus AQ16_5056 PF07662 Na+ dependent nucleoside transporter C-terminus AQ16_506 PF13302 Acetyltransferase (GNAT) domain AQ16_5060 PF03992 Antibiotic biosynthesis monooxygenase AQ16_5065 PF01791 DeoC/LacD family aldolase AQ16_5067 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AQ16_5067 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AQ16_5068 PF04198 Putative sugar-binding domain AQ16_5068 PF00325 Bacterial regulatory proteins, crp family AQ16_5069 PF00005 ABC transporter AQ16_507 PF01593 Flavin containing amine oxidoreductase AQ16_5070 PF02653 Branched-chain amino acid transport system / permease component AQ16_5071 PF02653 Branched-chain amino acid transport system / permease component AQ16_5072 PF13407 Periplasmic binding protein domain AQ16_5073 PF06039 Malate:quinone oxidoreductase (Mqo) AQ16_5075 PF06725 3D domain AQ16_5075 PF01476 LysM domain AQ16_5078 PF01636 Phosphotransferase enzyme family AQ16_5083 PF00793 DAHP synthetase I family AQ16_5083 PF01817 Chorismate mutase type II AQ16_5084 PF01264 Chorismate synthase AQ16_5085 PF00155 Aminotransferase class I and II AQ16_5086 PF01842 ACT domain AQ16_5086 PF02153 Prephenate dehydrogenase AQ16_5087 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AQ16_5089 PF00440 Bacterial regulatory proteins, tetR family AQ16_5089 PF16295 Tetracyclin repressor-like, C-terminal domain AQ16_509 PF00296 Luciferase-like monooxygenase AQ16_5090 PF03176 MMPL family AQ16_5099 PF00005 ABC transporter AQ16_5099 PF12848 ABC transporter AQ16_5100 PF00884 Sulfatase AQ16_5101 PF03741 Integral membrane protein TerC family AQ16_5102 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AQ16_5104 PF03611 PTS system sugar-specific permease component AQ16_5106 PF01522 Polysaccharide deacetylase AQ16_5107 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AQ16_5112 PF00583 Acetyltransferase (GNAT) family AQ16_5113 PF12867 DinB superfamily AQ16_5114 PF13536 Putative multidrug resistance efflux transporter AQ16_5118 PF02522 Aminoglycoside 3-N-acetyltransferase AQ16_512 PF00210 Ferritin-like domain AQ16_5122 PF09297 NADH pyrophosphatase zinc ribbon domain AQ16_5122 PF00293 NUDIX domain AQ16_5124 PF00005 ABC transporter AQ16_5125 PF09084 NMT1/THI5 like AQ16_5126 PF00528 Binding-protein-dependent transport system inner membrane component AQ16_5127 PF00296 Luciferase-like monooxygenase AQ16_5129 PF01594 AI-2E family transporter AQ16_5140 PF00005 ABC transporter AQ16_5144 PF03630 Fumble AQ16_5145 PF07977 FabA-like domain AQ16_5146 PF00155 Aminotransferase class I and II AQ16_5153 PF08241 Methyltransferase domain AQ16_5156 PF04226 Transglycosylase associated protein AQ16_516 PF00672 HAMP domain AQ16_516 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AQ16_516 PF02743 Cache domain AQ16_5161 PF07690 Major Facilitator Superfamily AQ16_5162 PF12793 Sugar transport-related sRNA regulator N-term AQ16_5162 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AQ16_5163 PF13171 Protein of unknown function (DUF4004) AQ16_5164 PF04519 Polymer-forming cytoskeletal AQ16_5166 PF07690 Major Facilitator Superfamily AQ16_517 PF03193 RsgA GTPase AQ16_5176 PF07552 Spore Coat Protein X and V domain AQ16_5177 PF02645 Uncharacterised protein, DegV family COG1307 AQ16_5178 PF01037 Lrp/AsnC ligand binding domain AQ16_5180 PF13520 Amino acid permease AQ16_5181 PF01432 Peptidase family M3 AQ16_5181 PF08439 Oligopeptidase F AQ16_5182 PF03808 Glycosyl transferase WecB/TagA/CpsF family AQ16_5184 PF01048 Phosphorylase superfamily AQ16_5185 PF13419 Haloacid dehalogenase-like hydrolase AQ16_5190 PF00072 Response regulator receiver domain AQ16_5190 PF00486 Transcriptional regulatory protein, C terminal AQ16_5191 PF00512 His Kinase A (phospho-acceptor) domain AQ16_5191 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ16_5191 PF00672 HAMP domain AQ16_5192 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain AQ16_5192 PF02129 X-Pro dipeptidyl-peptidase (S15 family) AQ16_5197 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AQ16_5199 PF01965 DJ-1/PfpI family AQ16_52 PF01447 Thermolysin metallopeptidase, catalytic domain AQ16_52 PF03413 Peptidase propeptide and YPEB domain AQ16_52 PF07504 Fungalysin/Thermolysin Propeptide Motif AQ16_52 PF02868 Thermolysin metallopeptidase, alpha-helical domain AQ16_5202 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AQ16_5202 PF13378 Enolase C-terminal domain-like AQ16_5203 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain AQ16_5203 PF00877 NlpC/P60 family AQ16_5204 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AQ16_5208 PF04914 DltD protein AQ16_521 PF07690 Major Facilitator Superfamily AQ16_5211 PF09335 SNARE associated Golgi protein AQ16_5212 PF08876 Domain of unknown function (DUF1836) AQ16_5215 PF04324 BFD-like [2Fe-2S] binding domain AQ16_5215 PF07992 Pyridine nucleotide-disulphide oxidoreductase AQ16_5217 PF07992 Pyridine nucleotide-disulphide oxidoreductase AQ16_5217 PF04324 BFD-like [2Fe-2S] binding domain AQ16_5218 PF02954 Bacterial regulatory protein, Fis family AQ16_5218 PF00158 Sigma-54 interaction domain AQ16_5218 PF13188 PAS domain AQ16_5219 PF01266 FAD dependent oxidoreductase AQ16_522 PF00248 Aldo/keto reductase family AQ16_5220 PF05544 Proline racemase AQ16_5221 PF05544 Proline racemase AQ16_5222 PF00701 Dihydrodipicolinate synthetase family AQ16_5223 PF00171 Aldehyde dehydrogenase family AQ16_5224 PF01235 Sodium:alanine symporter family AQ16_5225 PF02627 Carboxymuconolactone decarboxylase family AQ16_5226 PF03193 RsgA GTPase AQ16_5228 PF18416 N-acetylglucosamine binding protein domain 2 AQ16_5228 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading AQ16_5229 PF01368 DHH family AQ16_5229 PF02833 DHHA2 domain AQ16_523 PF01022 Bacterial regulatory protein, arsR family AQ16_5238 PF16124 RecQ zinc-binding AQ16_5238 PF09382 RQC domain AQ16_5238 PF00271 Helicase conserved C-terminal domain AQ16_5238 PF00270 DEAD/DEAH box helicase AQ16_5238 PF00570 HRDC domain AQ16_5239 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like AQ16_524 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain AQ16_524 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain AQ16_5242 PF13538 UvrD-like helicase C-terminal domain AQ16_5248 PF00583 Acetyltransferase (GNAT) family AQ16_525 PF00082 Subtilase family AQ16_5251 PF00753 Metallo-beta-lactamase superfamily AQ16_5251 PF03772 Competence protein AQ16_5251 PF13567 Domain of unknown function (DUF4131) AQ16_5253 PF04237 YjbR AQ16_5254 PF08241 Methyltransferase domain AQ16_5255 PF10990 Protein of unknown function (DUF2809) AQ16_5257 PF03781 Sulfatase-modifying factor enzyme 1 AQ16_5258 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase AQ16_5259 PF18416 N-acetylglucosamine binding protein domain 2 AQ16_5259 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading AQ16_526 PF18277 AbrB C-terminal domain AQ16_526 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin AQ16_5260 PF13673 Acetyltransferase (GNAT) domain AQ16_5261 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AQ16_5264 PF00574 Clp protease AQ16_5265 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AQ16_5266 PF00005 ABC transporter AQ16_5266 PF00571 CBS domain AQ16_5267 PF00528 Binding-protein-dependent transport system inner membrane component AQ16_527 PF02687 FtsX-like permease family AQ16_5273 PF00485 Phosphoribulokinase / Uridine kinase family AQ16_5274 PF04229 GrpB protein AQ16_5274 PF13673 Acetyltransferase (GNAT) domain AQ16_5275 PF00106 short chain dehydrogenase AQ16_5277 PF00676 Dehydrogenase E1 component AQ16_5278 PF02779 Transketolase, pyrimidine binding domain AQ16_5278 PF02780 Transketolase, C-terminal domain AQ16_5279 PF02817 e3 binding domain AQ16_5279 PF00364 Biotin-requiring enzyme AQ16_5279 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AQ16_528 PF02540 NAD synthase AQ16_5280 PF07992 Pyridine nucleotide-disulphide oxidoreductase AQ16_5280 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AQ16_5283 PF00455 DeoR C terminal sensor domain AQ16_5283 PF08220 DeoR-like helix-turn-helix domain AQ16_5284 PF13302 Acetyltransferase (GNAT) domain AQ16_5287 PF01590 GAF domain AQ16_5287 PF00158 Sigma-54 interaction domain AQ16_5287 PF02954 Bacterial regulatory protein, Fis family AQ16_529 PF13344 Haloacid dehalogenase-like hydrolase AQ16_529 PF00293 NUDIX domain AQ16_5291 PF08359 YsiA-like protein, C-terminal region AQ16_5291 PF00440 Bacterial regulatory proteins, tetR family AQ16_5292 PF00266 Aminotransferase class-V AQ16_5293 PF04199 Putative cyclase AQ16_5294 PF03301 Tryptophan 2,3-dioxygenase AQ16_5298 PF07486 Cell Wall Hydrolase AQ16_5298 PF01471 Putative peptidoglycan binding domain AQ16_5299 PF03413 Peptidase propeptide and YPEB domain AQ16_5299 PF14620 YpeB sporulation AQ16_5300 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) AQ16_5309 PF00561 alpha/beta hydrolase fold AQ16_5310 PF00107 Zinc-binding dehydrogenase AQ16_5310 PF08240 Alcohol dehydrogenase GroES-like domain AQ16_5311 PF00155 Aminotransferase class I and II AQ16_5311 PF00392 Bacterial regulatory proteins, gntR family AQ16_5312 PF00892 EamA-like transporter family AQ16_5313 PF11638 DnaA N-terminal domain AQ16_5313 PF08299 Bacterial dnaA protein helix-turn-helix AQ16_5313 PF00308 Bacterial dnaA protein AQ16_5314 PF00344 SecY translocase AQ16_5315 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AQ16_5317 PF03413 Peptidase propeptide and YPEB domain AQ16_5317 PF07504 Fungalysin/Thermolysin Propeptide Motif AQ16_5317 PF02868 Thermolysin metallopeptidase, alpha-helical domain AQ16_5317 PF01447 Thermolysin metallopeptidase, catalytic domain AQ16_5318 PF03714 Bacterial pullanase-associated domain AQ16_5318 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AQ16_5318 PF00128 Alpha amylase, catalytic domain AQ16_5319 PF01569 PAP2 superfamily AQ16_5327 PF01266 FAD dependent oxidoreductase AQ16_5330 PF01609 Transposase DDE domain AQ16_5333 PF00155 Aminotransferase class I and II AQ16_5333 PF00392 Bacterial regulatory proteins, gntR family AQ16_5334 PF00892 EamA-like transporter family AQ16_5335 PF01270 Glycosyl hydrolases family 8 AQ16_5336 PF01156 Inosine-uridine preferring nucleoside hydrolase AQ16_5338 PF01784 NIF3 (NGG1p interacting factor 3) AQ16_5339 PF13344 Haloacid dehalogenase-like hydrolase AQ16_5339 PF00293 NUDIX domain AQ16_534 PF01734 Patatin-like phospholipase AQ16_5343 PF07690 Major Facilitator Superfamily AQ16_5346 PF09297 NADH pyrophosphatase zinc ribbon domain AQ16_5346 PF00293 NUDIX domain AQ16_5347 PF02768 DNA polymerase III beta subunit, C-terminal domain AQ16_5347 PF02767 DNA polymerase III beta subunit, central domain AQ16_5347 PF00712 DNA polymerase III beta subunit, N-terminal domain AQ16_5348 PF00293 NUDIX domain AQ16_5350 PF12706 Beta-lactamase superfamily domain AQ16_5352 PF09234 Domain of unknown function (DUF1963) AQ16_5356 PF01734 Patatin-like phospholipase AQ16_5357 PF08000 Bacterial PH domain AQ16_5359 PF12867 DinB superfamily AQ16_536 PF00155 Aminotransferase class I and II AQ16_536 PF00392 Bacterial regulatory proteins, gntR family AQ16_5362 PF02673 Bacitracin resistance protein BacA AQ16_5364 PF01541 GIY-YIG catalytic domain AQ16_537 PF01810 LysE type translocator AQ16_5371 PF01609 Transposase DDE domain AQ16_5373 PF03009 Glycerophosphoryl diester phosphodiesterase family AQ16_5378 PF07690 Major Facilitator Superfamily AQ16_5379 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AQ16_5379 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AQ16_538 PF07690 Major Facilitator Superfamily AQ16_5380 PF07690 Major Facilitator Superfamily AQ16_5383 PF01965 DJ-1/PfpI family AQ16_539 PF00269 Small, acid-soluble spore proteins, alpha/beta type AQ16_5391 PF01569 PAP2 superfamily AQ16_5392 PF08240 Alcohol dehydrogenase GroES-like domain AQ16_5392 PF00107 Zinc-binding dehydrogenase AQ16_5393 PF18719 ArlS sensor domain AQ16_5393 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ16_5393 PF00512 His Kinase A (phospho-acceptor) domain AQ16_5394 PF00072 Response regulator receiver domain AQ16_5394 PF00486 Transcriptional regulatory protein, C terminal AQ16_5396 PF04229 GrpB protein AQ16_5398 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ16_5398 PF00512 His Kinase A (phospho-acceptor) domain AQ16_540 PF01261 Xylose isomerase-like TIM barrel AQ16_5401 PF12558 ATP-binding cassette cobalt transporter AQ16_5401 PF00005 ABC transporter AQ16_5402 PF07155 ECF-type riboflavin transporter, S component AQ16_5403 PF01177 Asp/Glu/Hydantoin racemase AQ16_5404 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase AQ16_5405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ16_5405 PF13426 PAS domain AQ16_5405 PF00512 His Kinase A (phospho-acceptor) domain AQ16_5405 PF13188 PAS domain AQ16_5405 PF00989 PAS fold AQ16_5408 PF00067 Cytochrome P450 AQ16_5410 PF07561 Domain of Unknown Function (DUF1540) AQ16_5411 PF00132 Bacterial transferase hexapeptide (six repeats) AQ16_5413 PF00067 Cytochrome P450 AQ16_5414 PF00535 Glycosyl transferase family 2 AQ16_5419 PF13276 HTH-like domain AQ16_5419 PF00665 Integrase core domain AQ16_5419 PF13333 Integrase core domain AQ16_5424 PF01609 Transposase DDE domain AQ16_5426 PF01609 Transposase DDE domain AQ16_5428 PF12169 DNA polymerase III subunits gamma and tau domain III AQ16_5429 PF07282 Putative transposase DNA-binding domain AQ16_5429 PF01385 Probable transposase AQ16_5429 PF12323 Helix-turn-helix domain AQ16_543 PF00501 AMP-binding enzyme AQ16_543 PF13193 AMP-binding enzyme C-terminal domain AQ16_5433 PF02810 SEC-C motif AQ16_544 PF04183 IucA / IucC family AQ16_544 PF06276 Ferric iron reductase FhuF-like transporter AQ16_5443 PF09397 Ftsk gamma domain AQ16_5443 PF17854 FtsK alpha domain AQ16_5443 PF01580 FtsK/SpoIIIE family AQ16_5447 PF11799 impB/mucB/samB family C-terminal domain AQ16_5447 PF11798 IMS family HHH motif AQ16_5447 PF00817 impB/mucB/samB family AQ16_545 PF04183 IucA / IucC family AQ16_545 PF06276 Ferric iron reductase FhuF-like transporter AQ16_5458 PF01494 FAD binding domain AQ16_5459 PF00753 Metallo-beta-lactamase superfamily AQ16_546 PF00583 Acetyltransferase (GNAT) family AQ16_5465 PF12323 Helix-turn-helix domain AQ16_5465 PF07282 Putative transposase DNA-binding domain AQ16_5465 PF01385 Probable transposase AQ16_5469 PF16295 Tetracyclin repressor-like, C-terminal domain AQ16_5469 PF00440 Bacterial regulatory proteins, tetR family AQ16_547 PF02308 MgtC family AQ16_5472 PF00877 NlpC/P60 family AQ16_5482 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain AQ16_5482 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AQ16_5483 PF02447 GntP family permease AQ16_5484 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AQ16_5484 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AQ16_5485 PF07729 FCD domain AQ16_5485 PF00392 Bacterial regulatory proteins, gntR family AQ16_549 PF01522 Polysaccharide deacetylase AQ16_5499 PF01385 Probable transposase AQ16_5499 PF07282 Putative transposase DNA-binding domain AQ16_5499 PF12323 Helix-turn-helix domain AQ16_550 PF00512 His Kinase A (phospho-acceptor) domain AQ16_550 PF00989 PAS fold AQ16_550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ16_550 PF16736 Single Cache-like AQ16_5501 PF04539 Sigma-70 region 3 AQ16_5501 PF04542 Sigma-70 region 2 AQ16_5501 PF04545 Sigma-70, region 4 AQ16_5501 PF03979 Sigma-70 factor, region 1.1 AQ16_5501 PF00140 Sigma-70 factor, region 1.2 AQ16_5504 PF10502 Signal peptidase, peptidase S26 AQ16_5506 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AQ16_5509 PF01609 Transposase DDE domain AQ16_551 PF00072 Response regulator receiver domain AQ16_551 PF00486 Transcriptional regulatory protein, C terminal AQ16_5525 PF07972 NrdI Flavodoxin like AQ16_553 PF03816 Cell envelope-related transcriptional attenuator domain AQ16_5536 PF00269 Small, acid-soluble spore proteins, alpha/beta type AQ16_5537 PF13700 Domain of unknown function (DUF4158) AQ16_5537 PF01526 Tn3 transposase DDE domain AQ16_5538 PF02796 Helix-turn-helix domain of resolvase AQ16_5538 PF00239 Resolvase, N terminal domain AQ16_5539 PF03845 Spore germination protein AQ16_5540 PF03323 Bacillus/Clostridium GerA spore germination protein AQ16_5541 PF05504 Spore germination B3/ GerAC like, C-terminal AQ16_5547 PF01526 Tn3 transposase DDE domain AQ16_5547 PF13700 Domain of unknown function (DUF4158) AQ16_5553 PF01520 N-acetylmuramoyl-L-alanine amidase AQ16_5553 PF00395 S-layer homology domain AQ16_5557 PF07690 Major Facilitator Superfamily AQ16_5559 PF00005 ABC transporter AQ16_556 PF00288 GHMP kinases N terminal domain AQ16_556 PF08544 GHMP kinases C terminal AQ16_5560 PF12704 MacB-like periplasmic core domain AQ16_5560 PF02687 FtsX-like permease family AQ16_5563 PF00072 Response regulator receiver domain AQ16_5563 PF00486 Transcriptional regulatory protein, C terminal AQ16_5564 PF00512 His Kinase A (phospho-acceptor) domain AQ16_5564 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ16_5567 PF13180 PDZ domain AQ16_5567 PF00595 PDZ domain AQ16_5568 PF17476 Clostridial binary toxin B/anthrax toxin PA domain 3 AQ16_5568 PF17475 Clostridial binary toxin B/anthrax toxin PA domain 2 AQ16_5568 PF03495 Clostridial binary toxin B/anthrax toxin PA Ca-binding domain AQ16_5568 PF07691 PA14 domain AQ16_5569 PF07737 Anthrax toxin lethal factor, N- and C-terminal domain AQ16_5569 PF03496 ADP-ribosyltransferase exoenzyme AQ16_557 PF00291 Pyridoxal-phosphate dependent enzyme AQ16_5576 PF00239 Resolvase, N terminal domain AQ16_5576 PF02796 Helix-turn-helix domain of resolvase AQ16_558 PF00742 Homoserine dehydrogenase AQ16_558 PF01842 ACT domain AQ16_558 PF03447 Homoserine dehydrogenase, NAD binding domain AQ16_5584 PF13333 Integrase core domain AQ16_5584 PF00665 Integrase core domain AQ16_5593 PF13180 PDZ domain AQ16_5594 PF01022 Bacterial regulatory protein, arsR family AQ16_5595 PF00892 EamA-like transporter family AQ16_5597 PF00291 Pyridoxal-phosphate dependent enzyme AQ16_5599 PF09385 Histidine kinase N terminal AQ16_56 PF01048 Phosphorylase superfamily AQ16_5600 PF05043 Mga helix-turn-helix domain AQ16_5600 PF08279 HTH domain AQ16_5600 PF00874 PRD domain AQ16_5601 PF13333 Integrase core domain AQ16_5601 PF00665 Integrase core domain AQ16_5602 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AQ16_5604 PF00665 Integrase core domain AQ16_5604 PF13333 Integrase core domain AQ16_5604 PF13276 HTH-like domain AQ16_5605 PF02638 Glycosyl hydrolase-like 10 AQ16_5607 PF01609 Transposase DDE domain AQ16_5611 PF01022 Bacterial regulatory protein, arsR family AQ16_5613 PF02348 Cytidylyltransferase AQ16_5614 PF02350 UDP-N-acetylglucosamine 2-epimerase AQ16_5615 PF03102 NeuB family AQ16_5615 PF08666 SAF domain AQ16_5616 PF02397 Bacterial sugar transferase AQ16_5617 PF00483 Nucleotidyl transferase AQ16_5619 PF13614 AAA domain AQ16_562 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain AQ16_562 PF01522 Polysaccharide deacetylase AQ16_5620 PF02706 Chain length determinant protein AQ16_5620 PF13807 G-rich domain on putative tyrosine kinase AQ16_5622 PF03816 Cell envelope-related transcriptional attenuator domain AQ16_5627 PF03808 Glycosyl transferase WecB/TagA/CpsF family AQ16_563 PF04439 Streptomycin adenylyltransferase AQ16_5642 PF00437 Type II/IV secretion system protein AQ16_565 PF00106 short chain dehydrogenase AQ16_566 PF00005 ABC transporter AQ16_5666 PF10087 Uncharacterized protein conserved in bacteria (DUF2325) AQ16_5669 PF04235 Protein of unknown function (DUF418) AQ16_5674 PF00395 S-layer homology domain AQ16_5675 PF01569 PAP2 superfamily AQ16_5677 PF00535 Glycosyl transferase family 2 AQ16_5678 PF00483 Nucleotidyl transferase AQ16_5679 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AQ16_5679 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AQ16_5679 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AQ16_5681 PF13276 HTH-like domain AQ16_5681 PF13333 Integrase core domain AQ16_5681 PF00665 Integrase core domain AQ16_5688 PF07737 Anthrax toxin lethal factor, N- and C-terminal domain AQ16_5688 PF03497 Anthrax toxin LF subunit AQ16_5689 PF00156 Phosphoribosyl transferase domain AQ16_5694 PF08279 HTH domain AQ16_5694 PF00874 PRD domain AQ16_5694 PF05043 Mga helix-turn-helix domain AQ16_5695 PF09385 Histidine kinase N terminal AQ16_5699 PF01526 Tn3 transposase DDE domain AQ16_5699 PF13700 Domain of unknown function (DUF4158) AQ16_57 PF13021 Domain of unknown function (DUF3885) AQ16_570 PF00072 Response regulator receiver domain AQ16_570 PF00486 Transcriptional regulatory protein, C terminal AQ16_5700 PF02796 Helix-turn-helix domain of resolvase AQ16_5700 PF00239 Resolvase, N terminal domain AQ16_5701 PF03845 Spore germination protein AQ16_5702 PF03323 Bacillus/Clostridium GerA spore germination protein AQ16_5703 PF05504 Spore germination B3/ GerAC like, C-terminal AQ16_5705 PF17475 Clostridial binary toxin B/anthrax toxin PA domain 2 AQ16_5705 PF03495 Clostridial binary toxin B/anthrax toxin PA Ca-binding domain AQ16_5705 PF17476 Clostridial binary toxin B/anthrax toxin PA domain 3 AQ16_5705 PF07691 PA14 domain AQ16_5706 PF01022 Bacterial regulatory protein, arsR family AQ16_571 PF00512 His Kinase A (phospho-acceptor) domain AQ16_571 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ16_5710 PF07737 Anthrax toxin lethal factor, N- and C-terminal domain AQ16_5710 PF09156 Anthrax toxin lethal factor, middle domain AQ16_5714 PF18277 AbrB C-terminal domain AQ16_5714 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin AQ16_5716 PF02899 Phage integrase, N-terminal SAM-like domain AQ16_5716 PF00589 Phage integrase family AQ16_572 PF00512 His Kinase A (phospho-acceptor) domain AQ16_572 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ16_572 PF16736 Single Cache-like AQ16_572 PF00989 PAS fold AQ16_5724 PF04740 LXG domain of WXG superfamily AQ16_5724 PF14436 Bacterial EndoU nuclease AQ16_5726 PF13276 HTH-like domain AQ16_5726 PF00665 Integrase core domain AQ16_5726 PF13333 Integrase core domain AQ16_5728 PF13276 HTH-like domain AQ16_5728 PF00665 Integrase core domain AQ16_5728 PF13333 Integrase core domain AQ16_573 PF00486 Transcriptional regulatory protein, C terminal AQ16_573 PF00072 Response regulator receiver domain AQ16_5730 PF01609 Transposase DDE domain AQ16_5732 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment AQ16_5734 PF00589 Phage integrase family AQ16_5739 PF18801 response regulator aspartate phosphatase H, N terminal AQ16_574 PF00005 ABC transporter AQ16_574 PF00664 ABC transporter transmembrane region AQ16_5741 PF17209 Hfq protein AQ16_5742 PF01022 Bacterial regulatory protein, arsR family AQ16_5743 PF02600 Disulfide bond formation protein DsbB AQ16_5746 PF00565 Staphylococcal nuclease homologue AQ16_5748 PF01131 DNA topoisomerase AQ16_5748 PF13342 C-terminal repeat of topoisomerase AQ16_5748 PF01751 Toprim domain AQ16_5751 PF08378 Nuclease-related domain AQ16_5759 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AQ16_576 PF00877 NlpC/P60 family AQ16_576 PF01476 LysM domain AQ16_5779 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AQ16_579 PF07943 Penicillin-binding protein 5, C-terminal domain AQ16_579 PF00768 D-alanyl-D-alanine carboxypeptidase AQ16_5791 PF01609 Transposase DDE domain AQ16_5792 PF01609 Transposase DDE domain AQ16_5798 PF01609 Transposase DDE domain AQ16_5799 PF01609 Transposase DDE domain AQ16_58 PF01966 HD domain AQ16_580 PF17676 LD-carboxypeptidase C-terminal domain AQ16_580 PF02016 LD-carboxypeptidase N-terminal domain AQ16_5802 PF01609 Transposase DDE domain AQ16_5803 PF01609 Transposase DDE domain AQ16_5808 PF01609 Transposase DDE domain AQ16_5809 PF01609 Transposase DDE domain AQ16_5814 PF17854 FtsK alpha domain AQ16_5814 PF13491 4TM region of DNA translocase FtsK/SpoIIIE AQ16_5814 PF09397 Ftsk gamma domain AQ16_5814 PF01580 FtsK/SpoIIIE family AQ16_583 PF00132 Bacterial transferase hexapeptide (six repeats) AQ16_584 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AQ16_5843 PF13152 Protein of unknown function (DUF3967) AQ16_5843 PF13411 MerR HTH family regulatory protein AQ16_5846 PF13614 AAA domain AQ16_585 PF00535 Glycosyl transferase family 2 AQ16_5853 PF01381 Helix-turn-helix AQ16_5861 PF01385 Probable transposase AQ16_5861 PF07282 Putative transposase DNA-binding domain AQ16_5861 PF12323 Helix-turn-helix domain AQ16_587 PF00005 ABC transporter AQ16_587 PF00664 ABC transporter transmembrane region AQ16_5871 PF01695 IstB-like ATP binding protein AQ16_588 PF00005 ABC transporter AQ16_588 PF00664 ABC transporter transmembrane region AQ16_589 PF02322 Cytochrome bd terminal oxidase subunit II AQ16_5897 PF00589 Phage integrase family AQ16_5898 PF03592 Terminase small subunit AQ16_5898 PF10668 Phage terminase small subunit AQ16_59 PF00072 Response regulator receiver domain AQ16_59 PF00486 Transcriptional regulatory protein, C terminal AQ16_590 PF01654 Cytochrome bd terminal oxidase subunit I AQ16_593 PF01047 MarR family AQ16_594 PF14552 Tautomerase enzyme AQ16_596 PF03466 LysR substrate binding domain AQ16_596 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AQ16_598 PF02653 Branched-chain amino acid transport system / permease component AQ16_599 PF00005 ABC transporter AQ16_60 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ16_60 PF00512 His Kinase A (phospho-acceptor) domain AQ16_600 PF12399 Branched-chain amino acid ATP-binding cassette transporter AQ16_600 PF00005 ABC transporter AQ16_603 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AQ16_603 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AQ16_604 PF01575 MaoC like domain AQ16_605 PF00501 AMP-binding enzyme AQ16_605 PF13193 AMP-binding enzyme C-terminal domain AQ16_607 PF07683 Cobalamin synthesis protein cobW C-terminal domain AQ16_607 PF02492 CobW/HypB/UreG, nucleotide-binding domain AQ16_608 PF01593 Flavin containing amine oxidoreductase AQ16_609 PF00056 lactate/malate dehydrogenase, NAD binding domain AQ16_609 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AQ16_61 PF07943 Penicillin-binding protein 5, C-terminal domain AQ16_61 PF00768 D-alanyl-D-alanine carboxypeptidase AQ16_610 PF01594 AI-2E family transporter AQ16_614 PF00881 Nitroreductase family AQ16_615 PF01323 DSBA-like thioredoxin domain AQ16_616 PF02082 Transcriptional regulator AQ16_617 PF03466 LysR substrate binding domain AQ16_617 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AQ16_618 PF00892 EamA-like transporter family AQ16_619 PF07987 Domain of unkown function (DUF1775) AQ16_62 PF05163 DinB family AQ16_620 PF05425 Copper resistance protein D AQ16_620 PF13115 YtkA-like AQ16_620 PF04234 CopC domain AQ16_622 PF05525 Branched-chain amino acid transport protein AQ16_623 PF02525 Flavodoxin-like fold AQ16_626 PF01385 Probable transposase AQ16_626 PF07282 Putative transposase DNA-binding domain AQ16_626 PF12323 Helix-turn-helix domain AQ16_627 PF13537 Glutamine amidotransferase domain AQ16_627 PF00733 Asparagine synthase AQ16_628 PF03466 LysR substrate binding domain AQ16_628 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AQ16_636 PF01037 Lrp/AsnC ligand binding domain AQ16_64 PF00485 Phosphoribulokinase / Uridine kinase family AQ16_641 PF07731 Multicopper oxidase AQ16_641 PF00394 Multicopper oxidase AQ16_641 PF07732 Multicopper oxidase AQ16_642 PF00557 Metallopeptidase family M24 AQ16_642 PF05195 Aminopeptidase P, N-terminal domain AQ16_646 PF05979 Bacterial protein of unknown function (DUF896) AQ16_647 PF07301 Protein of unknown function (DUF1453) AQ16_649 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AQ16_650 PF00591 Glycosyl transferase family, a/b domain AQ16_650 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain AQ16_650 PF02885 Glycosyl transferase family, helical bundle domain AQ16_651 PF01773 Na+ dependent nucleoside transporter N-terminus AQ16_651 PF07662 Na+ dependent nucleoside transporter C-terminus AQ16_652 PF01791 DeoC/LacD family aldolase AQ16_653 PF04198 Putative sugar-binding domain AQ16_654 PF00440 Bacterial regulatory proteins, tetR family AQ16_656 PF01906 Putative heavy-metal-binding AQ16_658 PF05791 Bacillus haemolytic enterotoxin (HBL) AQ16_659 PF05791 Bacillus haemolytic enterotoxin (HBL) AQ16_661 PF13520 Amino acid permease AQ16_663 PF02558 Ketopantoate reductase PanE/ApbA AQ16_663 PF08546 Ketopantoate reductase PanE/ApbA C terminal AQ16_666 PF01566 Natural resistance-associated macrophage protein AQ16_668 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ16_668 PF00512 His Kinase A (phospho-acceptor) domain AQ16_669 PF00486 Transcriptional regulatory protein, C terminal AQ16_669 PF00072 Response regulator receiver domain AQ16_670 PF13302 Acetyltransferase (GNAT) domain AQ16_671 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AQ16_672 PF01979 Amidohydrolase family AQ16_675 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain AQ16_675 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain AQ16_676 PF04397 LytTr DNA-binding domain AQ16_676 PF00072 Response regulator receiver domain AQ16_677 PF00144 Beta-lactamase AQ16_679 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AQ16_68 PF16177 Acetyl-coenzyme A synthetase N-terminus AQ16_68 PF13193 AMP-binding enzyme C-terminal domain AQ16_68 PF00501 AMP-binding enzyme AQ16_680 PF07690 Major Facilitator Superfamily AQ16_683 PF09587 Bacterial capsule synthesis protein PGA_cap AQ16_685 PF00291 Pyridoxal-phosphate dependent enzyme AQ16_685 PF00585 C-terminal regulatory domain of Threonine dehydratase AQ16_686 PF00920 Dehydratase family AQ16_687 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AQ16_687 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AQ16_689 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AQ16_689 PF00205 Thiamine pyrophosphate enzyme, central domain AQ16_689 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AQ16_69 PF01039 Carboxyl transferase domain AQ16_690 PF01063 Amino-transferase class IV AQ16_691 PF01625 Peptide methionine sulfoxide reductase AQ16_695 PF04239 Protein of unknown function (DUF421) AQ16_697 PF01522 Polysaccharide deacetylase AQ16_697 PF00457 Glycosyl hydrolases family 11 AQ16_697 PF03422 Carbohydrate binding module (family 6) AQ16_698 PF00209 Sodium:neurotransmitter symporter family AQ16_699 PF14667 Polysaccharide biosynthesis C-terminal domain AQ16_699 PF01943 Polysaccharide biosynthesis protein AQ16_70 PF00378 Enoyl-CoA hydratase/isomerase AQ16_702 PF00291 Pyridoxal-phosphate dependent enzyme AQ16_703 PF07690 Major Facilitator Superfamily AQ16_704 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AQ16_705 PF16360 GTP-binding GTPase Middle Region AQ16_705 PF13167 GTP-binding GTPase N-terminal AQ16_705 PF01926 50S ribosome-binding GTPase AQ16_707 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AQ16_707 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AQ16_709 PF07690 Major Facilitator Superfamily AQ16_71 PF00682 HMGL-like AQ16_710 PF03976 Polyphosphate kinase 2 (PPK2) AQ16_712 PF07690 Major Facilitator Superfamily AQ16_713 PF13302 Acetyltransferase (GNAT) domain AQ16_715 PF00395 S-layer homology domain AQ16_715 PF02368 Bacterial Ig-like domain (group 2) AQ16_716 PF00293 NUDIX domain AQ16_717 PF14158 YndJ-like protein AQ16_718 PF13761 Domain of unknown function (DUF4166) AQ16_72 PF00364 Biotin-requiring enzyme AQ16_720 PF13840 ACT domain AQ16_720 PF00696 Amino acid kinase family AQ16_722 PF01381 Helix-turn-helix AQ16_723 PF03590 Aspartate-ammonia ligase AQ16_725 PF00271 Helicase conserved C-terminal domain AQ16_725 PF12419 SNF2 Helicase protein AQ16_725 PF00176 SNF2 family N-terminal domain AQ16_726 PF00072 Response regulator receiver domain AQ16_726 PF08664 YcbB domain AQ16_727 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ16_728 PF00390 Malic enzyme, N-terminal domain AQ16_728 PF03949 Malic enzyme, NAD binding domain AQ16_729 PF00206 Lyase AQ16_729 PF10415 Fumarase C C-terminus AQ16_73 PF02785 Biotin carboxylase C-terminal domain AQ16_73 PF00289 Biotin carboxylase, N-terminal domain AQ16_73 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AQ16_730 PF00375 Sodium:dicarboxylate symporter family AQ16_731 PF00696 Amino acid kinase family AQ16_732 PF13091 PLD-like domain AQ16_737 PF00005 ABC transporter AQ16_738 PF07730 Histidine kinase AQ16_738 PF13185 GAF domain AQ16_738 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ16_738 PF13492 GAF domain AQ16_739 PF00072 Response regulator receiver domain AQ16_739 PF00196 Bacterial regulatory proteins, luxR family AQ16_74 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AQ16_74 PF02770 Acyl-CoA dehydrogenase, middle domain AQ16_74 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AQ16_744 PF04286 Protein of unknown function (DUF445) AQ16_745 PF00291 Pyridoxal-phosphate dependent enzyme AQ16_749 PF00578 AhpC/TSA family AQ16_750 PF02683 Cytochrome C biogenesis protein transmembrane region AQ16_754 PF03575 Peptidase family S51 AQ16_755 PF01554 MatE AQ16_759 PF00206 Lyase AQ16_759 PF10415 Fumarase C C-terminus AQ16_761 PF10415 Fumarase C C-terminus AQ16_761 PF00206 Lyase AQ16_762 PF00106 short chain dehydrogenase AQ16_763 PF13411 MerR HTH family regulatory protein AQ16_764 PF03553 Na+/H+ antiporter family AQ16_765 PF00535 Glycosyl transferase family 2 AQ16_767 PF03773 Predicted permease AQ16_768 PF02492 CobW/HypB/UreG, nucleotide-binding domain AQ16_768 PF07683 Cobalamin synthesis protein cobW C-terminal domain AQ16_769 PF00892 EamA-like transporter family AQ16_77 PF08359 YsiA-like protein, C-terminal region AQ16_77 PF00440 Bacterial regulatory proteins, tetR family AQ16_770 PF00392 Bacterial regulatory proteins, gntR family AQ16_770 PF07729 FCD domain AQ16_772 PF01545 Cation efflux family AQ16_772 PF16916 Dimerisation domain of Zinc Transporter AQ16_776 PF13537 Glutamine amidotransferase domain AQ16_776 PF00733 Asparagine synthase AQ16_778 PF01047 MarR family AQ16_780 PF00561 alpha/beta hydrolase fold AQ16_783 PF00300 Histidine phosphatase superfamily (branch 1) AQ16_784 PF13021 Domain of unknown function (DUF3885) AQ16_785 PF00768 D-alanyl-D-alanine carboxypeptidase AQ16_785 PF07943 Penicillin-binding protein 5, C-terminal domain AQ16_788 PF10787 Uncharacterised protein from bacillus cereus group AQ16_79 PF00005 ABC transporter AQ16_791 PF00528 Binding-protein-dependent transport system inner membrane component AQ16_793 PF08402 TOBE domain AQ16_793 PF00005 ABC transporter AQ16_799 PF08141 Small acid-soluble spore protein H family AQ16_800 PF04203 Sortase domain AQ16_801 PF04203 Sortase domain AQ16_802 PF17802 Prealbumin-like fold domain AQ16_802 PF05737 Collagen binding domain AQ16_802 PF05738 Cna protein B-type domain AQ16_806 PF03992 Antibiotic biosynthesis monooxygenase AQ16_81 PF00149 Calcineurin-like phosphoesterase AQ16_814 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AQ16_814 PF01411 tRNA synthetases class II (A) AQ16_814 PF02272 DHHA1 domain AQ16_815 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AQ16_815 PF00460 Flagella basal body rod protein AQ16_816 PF00448 SRP54-type protein, GTPase domain AQ16_817 PF00771 FHIPEP family AQ16_818 PF01312 FlhB HrpN YscU SpaS Family AQ16_820 PF01313 Bacterial export proteins, family 3 AQ16_821 PF00813 FliP family AQ16_823 PF04509 CheC-like family AQ16_823 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AQ16_824 PF02154 Flagellar motor switch protein FliM AQ16_824 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AQ16_826 PF01464 Transglycosylase SLT domain AQ16_827 PF00669 Bacterial flagellin N-terminal helical region AQ16_827 PF00700 Bacterial flagellin C-terminal helical region AQ16_828 PF00669 Bacterial flagellin N-terminal helical region AQ16_828 PF00700 Bacterial flagellin C-terminal helical region AQ16_829 PF00700 Bacterial flagellin C-terminal helical region AQ16_829 PF00669 Bacterial flagellin N-terminal helical region AQ16_830 PF00669 Bacterial flagellin N-terminal helical region AQ16_830 PF00700 Bacterial flagellin C-terminal helical region AQ16_831 PF00700 Bacterial flagellin C-terminal helical region AQ16_831 PF00669 Bacterial flagellin N-terminal helical region AQ16_832 PF12181 DNA binding domain of the motility gene repressor (MogR) AQ16_833 PF00072 Response regulator receiver domain AQ16_833 PF01584 CheW-like domain AQ16_836 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AQ16_836 PF07559 Flagellar basal body protein FlaE AQ16_836 PF00460 Flagella basal body rod protein AQ16_840 PF02874 ATP synthase alpha/beta family, beta-barrel domain AQ16_840 PF18269 T3SS EscN ATPase C-terminal domain AQ16_840 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AQ16_842 PF14842 FliG N-terminal domain AQ16_842 PF14841 FliG middle domain AQ16_842 PF01706 FliG C-terminal domain AQ16_843 PF08345 Flagellar M-ring protein C-terminal AQ16_843 PF01514 Secretory protein of YscJ/FliF family AQ16_844 PF02049 Flagellar hook-basal body complex protein FliE AQ16_845 PF00460 Flagella basal body rod protein AQ16_845 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AQ16_846 PF00460 Flagella basal body rod protein AQ16_849 PF07196 Flagellin hook IN motif AQ16_849 PF02465 Flagellar hook-associated protein 2 N-terminus AQ16_849 PF07195 Flagellar hook-associated protein 2 C-terminus AQ16_851 PF00460 Flagella basal body rod protein AQ16_851 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AQ16_855 PF01739 CheR methyltransferase, SAM binding domain AQ16_855 PF03705 CheR methyltransferase, all-alpha domain AQ16_858 PF04509 CheC-like family AQ16_858 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AQ16_859 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ16_859 PF02895 Signal transducing histidine kinase, homodimeric domain AQ16_859 PF01627 Hpt domain AQ16_859 PF07194 P2 response regulator binding domain AQ16_859 PF01584 CheW-like domain AQ16_86 PF08281 Sigma-70, region 4 AQ16_86 PF04542 Sigma-70 region 2 AQ16_860 PF00072 Response regulator receiver domain AQ16_861 PF00691 OmpA family AQ16_861 PF13677 Membrane MotB of proton-channel complex MotA/MotB AQ16_862 PF01618 MotA/TolQ/ExbB proton channel family AQ16_864 PF17209 Hfq protein AQ16_868 PF07690 Major Facilitator Superfamily AQ16_87 PF03717 Penicillin-binding Protein dimerisation domain AQ16_87 PF05223 NTF2-like N-terminal transpeptidase domain AQ16_87 PF00905 Penicillin binding protein transpeptidase domain AQ16_873 PF00881 Nitroreductase family AQ16_875 PF02698 DUF218 domain AQ16_876 PF04239 Protein of unknown function (DUF421) AQ16_878 PF13411 MerR HTH family regulatory protein AQ16_878 PF06445 GyrI-like small molecule binding domain AQ16_879 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AQ16_879 PF17770 Ribonuclease J C-terminal domain AQ16_879 PF00753 Metallo-beta-lactamase superfamily AQ16_88 PF00905 Penicillin binding protein transpeptidase domain AQ16_88 PF03717 Penicillin-binding Protein dimerisation domain AQ16_88 PF05223 NTF2-like N-terminal transpeptidase domain AQ16_880 PF00999 Sodium/hydrogen exchanger family AQ16_882 PF00202 Aminotransferase class-III AQ16_883 PF00474 Sodium:solute symporter family AQ16_884 PF04341 Protein of unknown function, DUF485 AQ16_887 PF01810 LysE type translocator AQ16_888 PF08892 YqcI/YcgG family AQ16_889 PF00313 'Cold-shock' DNA-binding domain AQ16_894 PF01263 Aldose 1-epimerase AQ16_895 PF13456 Reverse transcriptase-like AQ16_899 PF18014 Acetyltransferase (GNAT) domain AQ16_899 PF13673 Acetyltransferase (GNAT) domain AQ16_90 PF11738 Protein of unknown function (DUF3298) AQ16_90 PF13739 Deacetylase PdaC AQ16_90 PF01522 Polysaccharide deacetylase AQ16_902 PF13439 Glycosyltransferase Family 4 AQ16_902 PF00534 Glycosyl transferases group 1 AQ16_903 PF00535 Glycosyl transferase family 2 AQ16_906 PF02397 Bacterial sugar transferase AQ16_91 PF00355 Rieske [2Fe-2S] domain AQ16_911 PF01367 5'-3' exonuclease, C-terminal SAM fold AQ16_911 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AQ16_912 PF00690 Cation transporter/ATPase, N-terminus AQ16_912 PF00689 Cation transporting ATPase, C-terminus AQ16_914 PF03738 Glutathionylspermidine synthase preATP-grasp AQ16_917 PF00581 Rhodanese-like domain AQ16_918 PF10752 Protein of unknown function (DUF2533) AQ16_919 PF00583 Acetyltransferase (GNAT) family AQ16_92 PF00282 Pyridoxal-dependent decarboxylase conserved domain AQ16_921 PF00350 Dynamin family AQ16_923 PF04235 Protein of unknown function (DUF418) AQ16_924 PF00860 Permease family AQ16_925 PF00156 Phosphoribosyl transferase domain AQ16_926 PF00557 Metallopeptidase family M24 AQ16_928 PF02074 Carboxypeptidase Taq (M32) metallopeptidase AQ16_929 PF13307 Helicase C-terminal domain AQ16_931 PF02926 THUMP domain AQ16_931 PF01170 Putative RNA methylase family UPF0020 AQ16_932 PF05103 DivIVA protein AQ16_933 PF06908 YspA SLOG family AQ16_940 PF10720 Protein of unknown function (DUF2515) AQ16_941 PF03838 Recombination protein U AQ16_942 PF00905 Penicillin binding protein transpeptidase domain AQ16_942 PF00912 Transglycosylase AQ16_944 PF00730 HhH-GPD superfamily base excision DNA repair protein AQ16_944 PF10576 Iron-sulfur binding domain of endonuclease III AQ16_944 PF00633 Helix-hairpin-helix motif AQ16_945 PF07261 Replication initiation and membrane attachment AQ16_946 PF00155 Aminotransferase class I and II AQ16_948 PF14084 Protein of unknown function (DUF4264) AQ16_949 PF13307 Helicase C-terminal domain AQ16_949 PF04851 Type III restriction enzyme, res subunit AQ16_949 PF00929 Exonuclease AQ16_950 PF02261 Aspartate decarboxylase AQ16_951 PF02569 Pantoate-beta-alanine ligase AQ16_952 PF02548 Ketopantoate hydroxymethyltransferase AQ16_954 PF02237 Biotin protein ligase C terminal domain AQ16_954 PF03099 Biotin/lipoate A/B protein ligase family AQ16_954 PF08279 HTH domain AQ16_955 PF01743 Poly A polymerase head domain AQ16_955 PF12627 Probable RNA and SrmB- binding site of polymerase A AQ16_955 PF13735 tRNA nucleotidyltransferase domain 2 putative AQ16_956 PF00534 Glycosyl transferases group 1 AQ16_956 PF13439 Glycosyltransferase Family 4 AQ16_957 PF02585 GlcNAc-PI de-N-acetylase AQ16_958 PF02142 MGS-like domain AQ16_959 PF01113 Dihydrodipicolinate reductase, N-terminus AQ16_959 PF05173 Dihydrodipicolinate reductase, C-terminus AQ16_960 PF03819 MazG nucleotide pyrophosphohydrolase domain AQ16_961 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AQ16_961 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 AQ16_963 PF04298 Putative neutral zinc metallopeptidase AQ16_964 PF09577 Sporulation protein YpjB (SpoYpjB) AQ16_966 PF07187 Protein of unknown function (DUF1405) AQ16_967 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AQ16_967 PF00032 Cytochrome b(C-terminal)/b6/petD AQ16_968 PF00033 Cytochrome b/b6/petB AQ16_969 PF00355 Rieske [2Fe-2S] domain AQ16_970 PF10673 Protein of unknown function (DUF2487) AQ16_971 PF08858 IDEAL domain AQ16_971 PF08864 UPF0302 domain AQ16_973 PF00155 Aminotransferase class I and II AQ16_974 PF01761 3-dehydroquinate synthase AQ16_975 PF01264 Chorismate synthase AQ16_976 PF00334 Nucleoside diphosphate kinase AQ16_977 PF00348 Polyprenyl synthetase AQ16_978 PF01209 ubiE/COQ5 methyltransferase family AQ16_979 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 AQ16_98 PF03313 Serine dehydratase alpha chain AQ16_980 PF01227 GTP cyclohydrolase I AQ16_981 PF00216 Bacterial DNA-binding protein AQ16_982 PF09547 Stage IV sporulation protein A (spore_IV_A) AQ16_984 PF10966 Protein of unknown function (DUF2768) AQ16_986 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AQ16_986 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AQ16_987 PF01926 50S ribosome-binding GTPase AQ16_987 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AQ16_989 PF14045 YIEGIA protein AQ16_99 PF03315 Serine dehydratase beta chain AQ16_99 PF01842 ACT domain AQ16_991 PF14140 YpzI-like protein AQ16_992 PF01070 FMN-dependent dehydrogenase AQ16_993 PF00575 S1 RNA binding domain AQ16_994 PF02224 Cytidylate kinase AQ16_996 PF00710 Asparaginase, N-terminal AQ16_996 PF17763 Glutaminase/Asparaginase C-terminal domain