locus_tag old_locus_tag gene Name start end strand product note type ID NCBI BCG9842_0003 BCG9842_0003 BCG9842_0003 31828 32394 + hypothetical protein identified by glimmer%3B putative gene gene5786 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0003 BCG9842_0004 BCG9842_0004 BCG9842_0004 32609 35959 + helicase conserved C- domain protein identified by match to protein family HMM PF00271 gene gene5787 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0004 BCG9842_0005 BCG9842_0005 BCG9842_0005 35985 36848 + hypothetical protein identified by glimmer%3B putative gene gene5788 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0005 BCG9842_0006 BCG9842_0006 BCG9842_0006 37077 38075 + YdjC gene gene5789 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0006 BCG9842_0007 BCG9842_0007 BCG9842_0007 38097 39449 + multi-sensor signal transduction histidine kinase%2C putative identified by match to protein family HMM PF02518 gene gene5790 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0007 BCG9842_0008 BCG9842_0008 BCG9842_0008 39462 40040 + Two-component response regulator YhcZ%2C putative identified by match to protein family HMM PF00072 gene gene5791 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0008 BCG9842_0009 BCG9842_0009 BCG9842_0009 40487 40669 + HTH-type transcriptional regulator SinR identified by match to protein family HMM PF01381 gene gene5792 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0009 BCG9842_0010 BCG9842_0010 BCG9842_0010 40881 42056 + hypothetical protein identified by glimmer%3B putative gene gene5793 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0010 BCG9842_0011 BCG9842_0011 BCG9842_0011 42053 42205 + hypothetical protein identified by glimmer%3B putative gene gene5794 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0011 BCG9842_0012 BCG9842_0012 BCG9842_0012 42484 43185 + hypothetical protein identified by glimmer%3B putative gene gene5795 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0012 BCG9842_0013 BCG9842_0013 BCG9842_0013 43197 43736 + conserved hypothetical protein gene gene5796 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0013 BCG9842_0014 BCG9842_0014 BCG9842_0014 43757 44332 + hypothetical protein identified by glimmer%3B putative gene gene5797 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0014 BCG9842_0015 BCG9842_0015 BCG9842_0015 44606 46252 + DNA polymerase III subunit gamma/tau identified by match to protein family HMM PF00004%3B match to protein family HMM TIGR02397 gene gene5798 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0015 BCG9842_0016 BCG9842_0016 BCG9842_0016 46269 46436 - hypothetical protein identified by glimmer%3B putative gene gene5799 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0016 BCG9842_0017 BCG9842_0017 BCG9842_0017 46519 46884 - YtvB gene gene5800 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0017 BCG9842_0018 BCG9842_0018 BCG9842_0018 47320 47778 + hypothetical protein identified by glimmer%3B putative gene gene5801 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0018 BCG9842_0019 BCG9842_0019 BCG9842_0019 47792 48391 + hypothetical protein identified by glimmer%3B putative gene gene5802 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0019 BCG9842_0020 BCG9842_0020 BCG9842_0020 48449 48604 + hypothetical protein identified by glimmer%3B putative gene gene5803 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0020 BCG9842_0021 BCG9842_0021 BCG9842_0021 48703 50694 + conserved hypothetical protein gene gene5804 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0021 BCG9842_0022 BCG9842_0022 BCG9842_0022 50823 51989 + conserved hypothetical protein gene gene5805 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0022 BCG9842_0023 BCG9842_0023 lepB_4 lepB_4 52063 52587 - signal peptidase I identified by match to protein family HMM PF00717%3B match to protein family HMM TIGR02227 gene gene5806 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0023 BCG9842_0024 BCG9842_0024 BCG9842_0024 52888 53379 + conserved hypothetical protein gene gene5807 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0024 BCG9842_0025 BCG9842_0025 BCG9842_0025 53473 53841 + hypothetical protein identified by glimmer%3B putative gene gene5808 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0025 BCG9842_0026 BCG9842_0026 BCG9842_0026 53972 55012 + conserved hypothetical protein gene gene5809 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0026 BCG9842_0027 BCG9842_0027 BCG9842_0027 55251 55910 + group-specific protein gene gene5810 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0027 BCG9842_0028 BCG9842_0028 BCG9842_0028 55927 57174 + glutathionylspermidine synthetase identified by match to protein family HMM PF03738 gene gene5811 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0028 BCG9842_0029 BCG9842_0029 BCG9842_0029 57635 58108 + hypothetical protein identified by glimmer%3B putative gene gene5812 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0029 BCG9842_0030 BCG9842_0030 BCG9842_0030 58320 58964 + thermonuclease family protein identified by match to protein family HMM PF00565 gene gene5813 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0030 BCG9842_0031 BCG9842_0031 BCG9842_0031 58978 59247 + actin binding protein gene gene5814 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0031 BCG9842_0032 BCG9842_0032 BCG9842_0032 59293 59895 + hypothetical protein identified by glimmer%3B putative gene gene5815 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0032 BCG9842_0033 BCG9842_0033 BCG9842_0033 60000 60353 + conserved hypothetical protein gene gene5816 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0033 BCG9842_0034 BCG9842_0034 lepB_5 lepB_5 60420 61064 - signal peptidase I identified by match to protein family HMM PF00717%3B match to protein family HMM TIGR02227 gene gene5817 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0034 BCG9842_0035 BCG9842_0035 BCG9842_0035 61336 62223 + RNA polymerase sigma factor%2C sigma-70 family identified by match to protein family HMM PF04542%3B match to protein family HMM PF04545%3B match to protein family HMM TIGR02937 gene gene5818 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0035 BCG9842_0036 BCG9842_0036 BCG9842_0036 62387 62770 + conserved hypothetical protein gene gene5819 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0036 BCG9842_0037 BCG9842_0037 BCG9842_0037 62803 63057 + recombination protein RecR%2C putative gene gene5820 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0037 BCG9842_0038 BCG9842_0038 BCG9842_0038 63125 63583 + hypothetical protein identified by glimmer%3B putative gene gene5821 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0038 BCG9842_0039 BCG9842_0039 BCG9842_0039 63614 64000 + hypothetical protein identified by glimmer%3B putative gene gene5822 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0039 BCG9842_0040 BCG9842_0040 BCG9842_0040 64003 64275 + hypothetical protein identified by glimmer%3B putative gene gene5823 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0040 BCG9842_0041 BCG9842_0041 BCG9842_0041 64390 65331 + hypothetical protein identified by glimmer%3B putative gene gene5824 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0041 BCG9842_0042 BCG9842_0042 BCG9842_0042 65446 67197 + hypothetical protein identified by glimmer%3B putative gene gene5825 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0042 BCG9842_0043 BCG9842_0043 holA_2 holA_2 67410 68381 + DNA polymerase III%2C delta subunit identified by match to protein family HMM PF06144%3B match to protein family HMM TIGR01128 gene gene5826 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0043 BCG9842_0044 BCG9842_0044 BCG9842_0044 68451 68990 + hypothetical protein identified by glimmer%3B putative gene gene5827 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0044 BCG9842_0045 BCG9842_0045 BCG9842_0045 69024 69683 + conserved hypothetical protein gene gene5828 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0045 BCG9842_0046 BCG9842_0046 BCG9842_0046 70015 70266 + host factor Hfq identified by match to protein family HMM PF01423 gene gene5829 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0046 BCG9842_0047 BCG9842_0047 BCG9842_0047 70320 70721 + hypothetical protein identified by glimmer%3B putative gene gene5830 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0047 BCG9842_0048 BCG9842_0048 BCG9842_0048 70742 71386 + hypothetical protein identified by glimmer%3B putative gene gene5831 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0048 BCG9842_0049 BCG9842_0049 BCG9842_0049 71892 72350 + hypothetical protein identified by glimmer%3B putative gene gene5832 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0049 BCG9842_0050 BCG9842_0050 BCG9842_0050 72390 72503 + hypothetical protein identified by glimmer%3B putative gene gene5833 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0050 BCG9842_0051 BCG9842_0051 BCG9842_0051 72708 72998 + conserved hypothetical protein gene gene5834 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0051 BCG9842_0052 BCG9842_0052 BCG9842_0052 73075 73353 + transcriptional regulator%2C ArsR family identified by match to protein family HMM PF01022 gene gene5835 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0052 BCG9842_0053 BCG9842_0053 BCG9842_0053 73621 74103 + conserved hypothetical protein gene gene5836 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0053 BCG9842_0054 BCG9842_0054 BCG9842_0054 74220 74687 + hypothetical protein identified by glimmer%3B putative gene gene5837 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0054 BCG9842_0055 BCG9842_0055 BCG9842_0055 74744 75037 + conserved hypothetical protein gene gene5838 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0055 BCG9842_0056 BCG9842_0056 BCG9842_0056 75338 75568 + hypothetical protein identified by glimmer%3B putative gene gene5839 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0056 BCG9842_0057 BCG9842_0057 BCG9842_0057 75727 76872 - integrase-recombinase identified by match to protein family HMM PF00589 gene gene5840 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0057 BCG9842_0058 BCG9842_0058 BCG9842_0058 77042 77872 + conserved hypothetical protein identified by match to protein family HMM PF02810%3B match to protein family HMM PF03692 gene gene5841 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0058 BCG9842_0059 BCG9842_0059 BCG9842_0059 77997 78275 + transition state regulatory protein AbrB identified by match to protein family HMM PF04014%3B match to protein family HMM TIGR01439 gene gene5842 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0059 BCG9842_0060 BCG9842_0060 BCG9842_0060 78587 79102 + hypothetical protein identified by glimmer%3B putative gene gene5843 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0060 BCG9842_0061 BCG9842_0061 BCG9842_0061 79730 80704 + DNA-methyltransferase identified by match to protein family HMM PF02086 gene gene5844 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0061 BCG9842_0062 BCG9842_0062 BCG9842_0062 80763 81041 + conserved hypothetical protein gene gene5845 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0062 BCG9842_0063 BCG9842_0063 BCG9842_0063 81309 82295 - hypothetical protein identified by glimmer%3B putative gene gene5846 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0063 BCG9842_0064 BCG9842_0064 BCG9842_0064 82414 82545 - hypothetical protein identified by glimmer%3B putative gene gene5847 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0064 BCG9842_0065 BCG9842_0065 BCG9842_0065 82636 82851 + conserved domain protein identified by match to protein family HMM PF00269 gene gene5848 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0065 BCG9842_0066 BCG9842_0066 BCG9842_0066 83025 83447 + conserved hypothetical protein gene gene5849 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0066 BCG9842_0067 BCG9842_0067 BCG9842_0067 83956 84183 + conserved hypothetical protein gene gene5850 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0067 BCG9842_0068 BCG9842_0068 BCG9842_0068 84257 84982 + conserved hypothetical protein gene gene5851 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0068 BCG9842_0069 BCG9842_0069 BCG9842_0069 85064 85348 + hypothetical protein identified by glimmer%3B putative gene gene5852 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0069 BCG9842_0070 BCG9842_0070 BCG9842_0070 85493 85945 + hypothetical protein identified by glimmer%3B putative gene gene5853 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0070 BCG9842_0071 BCG9842_0071 BCG9842_0071 86008 86988 + hypothetical protein identified by glimmer%3B putative gene gene5854 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0071 BCG9842_0072 BCG9842_0072 BCG9842_0072 87175 88095 + conserved hypothetical protein identified by match to protein family HMM PF06013 gene gene5855 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0072 BCG9842_0073 BCG9842_0073 BCG9842_0073 88108 88467 + conserved hypothetical protein gene gene5856 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0073 BCG9842_0074 BCG9842_0074 hup hup 88556 88828 - DNA-binding protein HU identified by match to protein family HMM PF00216 gene gene5857 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0074 BCG9842_0075 BCG9842_0075 BCG9842_0075 89168 89305 - conserved domain protein gene gene5858 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0075 BCG9842_0076 BCG9842_0076 BCG9842_0076 89302 90396 - response regulator aspartate phosphatase gene gene5859 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0076 BCG9842_0077 BCG9842_0077 BCG9842_0077 90743 91156 + conserved hypothetical protein gene gene5860 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0077 BCG9842_0078 BCG9842_0078 BCG9842_0078 91473 91682 + hypothetical protein identified by glimmer%3B putative gene gene5861 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0078 BCG9842_0079 BCG9842_0079 BCG9842_0079 91696 92124 + hypothetical protein identified by glimmer%3B putative gene gene5862 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0079 BCG9842_0080 BCG9842_0080 BCG9842_0080 92575 93558 + hypothetical protein identified by glimmer%3B putative gene gene5863 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0080 BCG9842_0081 BCG9842_0081 BCG9842_0081 93772 94173 + hypothetical protein identified by glimmer%3B putative gene gene5864 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0081 BCG9842_0082 BCG9842_0082 BCG9842_0082 94264 94395 - hypothetical protein identified by glimmer%3B putative gene gene5865 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0082 BCG9842_0083 BCG9842_0083 BCG9842_0083 94379 94969 + protein of unknown function gene gene5866 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0083 BCG9842_0084 BCG9842_0084 BCG9842_0084 95094 95342 + hypothetical protein identified by glimmer%3B putative gene gene5867 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0084 BCG9842_0085 BCG9842_0085 BCG9842_0085 95522 95704 - conserved hypothetical protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift gene gene5868 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0085 BCG9842_0086 BCG9842_0086 BCG9842_0086 95965 96522 + histidinol-phosphate phosphatase family domain protein identified by match to protein family HMM PF08645%3B match to protein family HMM TIGR01656%3B match to protein family HMM TIGR01662 gene gene5869 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0086 BCG9842_0087 BCG9842_0087 BCG9842_0087 96766 97191 + conserved hypothetical protein gene gene5870 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0087 BCG9842_0088 BCG9842_0088 BCG9842_0088 97295 97816 + hypothetical protein identified by glimmer%3B putative gene gene5871 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0088 BCG9842_0089 BCG9842_0089 BCG9842_0089 97907 98365 + hypothetical protein identified by glimmer%3B putative gene gene5872 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0089 BCG9842_0090 BCG9842_0090 BCG9842_0090 98393 98866 + hypothetical protein identified by glimmer%3B putative gene gene5873 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0090 BCG9842_0091 BCG9842_0091 BCG9842_0091 98886 99182 + conserved hypothetical protein gene gene5874 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0091 BCG9842_0092 BCG9842_0092 BCG9842_0092 99344 101344 + helicase%2C UvrD/Rep family an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF00580 gene gene5875 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0092 BCG9842_0093 BCG9842_0093 BCG9842_0093 101678 102658 + DNA polymerase III subunit delta' identified by match to protein family HMM TIGR00678 gene gene5876 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0093 BCG9842_0094 BCG9842_0094 BCG9842_0094 102691 102951 + hypothetical protein identified by glimmer%3B putative gene gene5877 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0094 BCG9842_0095 BCG9842_0095 BCG9842_0095 103311 104384 + hypothetical protein identified by glimmer%3B putative gene gene5878 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0095 BCG9842_0096 BCG9842_0096 BCG9842_0096 104551 104949 - hypothetical protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a premature stop%3B identified by glimmer%3B putative gene gene5879 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0096 BCG9842_0097 BCG9842_0097 BCG9842_0097 105369 105596 + hypothetical protein identified by glimmer%3B putative gene gene5880 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0097 BCG9842_0098 BCG9842_0098 BCG9842_0098 105813 106211 + hypothetical protein identified by glimmer%3B putative gene gene5881 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0098 BCG9842_0099 BCG9842_0099 BCG9842_0099 106251 106616 + conserved hypothetical protein gene gene5882 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0099 BCG9842_0100 BCG9842_0100 BCG9842_0100 106733 108490 + hypothetical protein identified by glimmer%3B putative gene gene5883 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0100 BCG9842_0101 BCG9842_0101 BCG9842_0101 108839 109084 + hypothetical protein identified by glimmer%3B putative gene gene5884 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0101 BCG9842_0102 BCG9842_0102 dcm dcm 109404 110720 + DNA-cytosine methyltransferase identified by match to protein family HMM PF00145%3B match to protein family HMM TIGR00675 gene gene5885 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0102 BCG9842_0103 BCG9842_0103 BCG9842_0103 110774 111403 + thermonuclease identified by match to protein family HMM PF00565 gene gene5886 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0103 BCG9842_0104 BCG9842_0104 BCG9842_0104 111805 112086 - conserved hypothetical protein gene gene5887 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0104 BCG9842_0105 BCG9842_0105 BCG9842_0105 112122 112460 - lysin%2C putative gene gene5888 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0105 BCG9842_0106 BCG9842_0106 BCG9842_0106 112843 113742 + foldase protein PrsA identified by match to protein family HMM PF00639 gene gene5889 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0106 BCG9842_0107 BCG9842_0107 BCG9842_0107 113817 114161 + hypothetical protein identified by glimmer%3B putative gene gene5890 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0107 BCG9842_0108 BCG9842_0108 BCG9842_0108 114216 114371 + hypothetical protein identified by glimmer%3B putative gene gene5891 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0108 BCG9842_0109 BCG9842_0109 BCG9842_0109 114507 114632 + phage protein gene gene5892 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0109 BCG9842_0110 BCG9842_0110 BCG9842_0110 114686 114865 + kinesin gene gene5893 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0110 BCG9842_0111 BCG9842_0111 BCG9842_0111 114912 115307 + conserved hypothetical protein gene gene5894 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0111 BCG9842_0112 BCG9842_0112 BCG9842_0112 115382 115777 + gp52 identified by match to protein family HMM PF09643 gene gene5895 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0112 BCG9842_0113 BCG9842_0113 BCG9842_0113 115917 116147 + conserved hypothetical protein gene gene5896 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0113 BCG9842_0114 BCG9842_0114 BCG9842_0114 116528 116734 + conserved hypothetical protein gene gene5897 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0114 BCG9842_0115 BCG9842_0115 BCG9842_0115 116796 116924 + hypothetical protein identified by glimmer%3B putative gene gene5898 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0115 BCG9842_0116 BCG9842_0116 BCG9842_0116 117019 117348 + hypothetical protein identified by glimmer%3B putative gene gene5899 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0116 BCG9842_0117 BCG9842_0117 BCG9842_0117 117437 117940 - hypothetical protein identified by glimmer%3B putative gene gene5900 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0117 BCG9842_0118 BCG9842_0118 BCG9842_0118 117955 119346 - type II DNA-methyltransferase%2C putative identified by match to protein family HMM PF00145 gene gene5901 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0118 BCG9842_0119 BCG9842_0119 BCG9842_0119 120015 120365 + hypothetical protein identified by glimmer%3B putative gene gene5902 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0119 BCG9842_0120 BCG9842_0120 BCG9842_0120 120537 120971 + hypothetical protein identified by glimmer%3B putative gene gene5903 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0120 BCG9842_0121 BCG9842_0121 BCG9842_0121 121143 121646 + hypothetical protein identified by glimmer%3B putative gene gene5904 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0121 BCG9842_0122 BCG9842_0122 BCG9842_0122 121740 122753 - primosomal protein DnaI gene gene5905 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0122 BCG9842_0123 BCG9842_0123 BCG9842_0123 122983 123243 - hypothetical protein identified by glimmer%3B putative gene gene5906 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0123 BCG9842_0124 BCG9842_0124 BCG9842_0124 124060 124230 + conserved hypothetical protein gene gene5907 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0124 BCG9842_0125 BCG9842_0125 hfq hfq 124835 125023 + RNA chaperone Hfq identified by match to protein family HMM PF01423%3B match to protein family HMM TIGR02383 gene gene5908 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0125 BCG9842_0126 BCG9842_0126 BCG9842_0126 125066 126445 + hypothetical protein identified by glimmer%3B putative gene gene5909 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0126 BCG9842_0127 BCG9842_0127 BCG9842_0127 126758 127057 + transcriptional regulator%2C ArsR family identified by match to protein family HMM PF01022 gene gene5910 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0127 BCG9842_0128 BCG9842_0128 BCG9842_0128 127501 128025 + hypothetical protein identified by glimmer%3B putative gene gene5911 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0128 BCG9842_0129 BCG9842_0129 BCG9842_0129 128067 128375 + hypothetical protein identified by glimmer%3B putative gene gene5912 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0129 BCG9842_0130 BCG9842_0130 BCG9842_0130 128887 129162 + conserved hypothetical protein gene gene5913 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0130 BCG9842_0131 BCG9842_0131 BCG9842_0131 129816 130961 - hypothetical protein identified by glimmer%3B putative gene gene5914 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0131 BCG9842_0132 BCG9842_0132 BCG9842_0132 130991 131863 - DNA processing protein%2C Smf family identified by match to protein family HMM PF02481 gene gene5915 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0132 BCG9842_0133 BCG9842_0133 BCG9842_0133 132314 132436 - hypothetical protein identified by glimmer%3B putative gene gene5916 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0133 BCG9842_0134 BCG9842_0134 BCG9842_0134 132676 133836 + hypothetical protein identified by glimmer%3B putative gene gene5917 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0134 BCG9842_0135 BCG9842_0135 BCG9842_0135 134422 134712 + conserved hypothetical protein gene gene5918 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0135 BCG9842_0136 BCG9842_0136 BCG9842_0136 134869 135954 + integrase/recombinase%2C phage integrase family protein identified by match to protein family HMM PF00589 gene gene5919 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0136 BCG9842_0137 BCG9842_0137 BCG9842_0137 136096 136743 - hypothetical protein identified by glimmer%3B putative gene gene5920 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0137 BCG9842_0138 BCG9842_0138 BCG9842_0138 136843 137562 - conserved hypothetical protein gene gene5921 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0138 BCG9842_0139 BCG9842_0139 BCG9842_0139 137931 138281 - conserved hypothetical protein identified by match to protein family HMM PF08863 gene gene5922 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0139 BCG9842_0140 BCG9842_0140 BCG9842_0140 138278 139543 - DNA-damage repair protein identified by match to protein family HMM PF00817 gene gene5923 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0140 BCG9842_0141 BCG9842_0141 BCG9842_0141 139755 140105 - TrsE%2C putative gene gene5924 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0141 BCG9842_0142 BCG9842_0142 BCG9842_0142 140122 140304 - hypothetical protein identified by glimmer%3B putative gene gene5925 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0142 BCG9842_0143 BCG9842_0143 BCG9842_0143 140388 140891 - conserved hypothetical protein gene gene5926 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0143 BCG9842_0144 BCG9842_0144 BCG9842_0144 140912 141307 - conserved hypothetical protein gene gene5927 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0144 BCG9842_0145 BCG9842_0145 BCG9842_0145 141369 141590 - hypothetical protein identified by glimmer%3B putative gene gene5928 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0145 BCG9842_0146 BCG9842_0146 BCG9842_0146 141721 141852 - hypothetical protein identified by glimmer%3B putative gene gene5929 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0146 BCG9842_0147 BCG9842_0147 BCG9842_0147 141852 142262 - hypothetical protein identified by glimmer%3B putative gene gene5930 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0147 BCG9842_0148 BCG9842_0148 BCG9842_0148 142348 142836 - conserved hypothetical protein gene gene5931 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0148 BCG9842_0149 BCG9842_0149 BCG9842_0149 142894 143196 - conserved hypothetical protein gene gene5932 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0149 BCG9842_0150 BCG9842_0150 BCG9842_0150 143222 143491 - hypothetical protein identified by glimmer%3B putative gene gene5933 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0150 BCG9842_0151 BCG9842_0151 BCG9842_0151 143524 143694 - hypothetical protein identified by glimmer%3B putative gene gene5934 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0151 BCG9842_0152 BCG9842_0152 BCG9842_0152 143950 144216 - conserved hypothetical protein gene gene5935 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0152 BCG9842_0153 BCG9842_0153 BCG9842_0153 144632 145072 - conserved hypothetical protein gene gene5936 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0153 BCG9842_0154 BCG9842_0154 BCG9842_0154 145145 145327 - hypothetical protein identified by glimmer%3B putative gene gene5937 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0154 BCG9842_0155 BCG9842_0155 BCG9842_0155 145576 146124 - hypothetical protein identified by glimmer%3B putative gene gene5938 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0155 BCG9842_0156 BCG9842_0156 BCG9842_0156 146248 147645 - hypothetical protein identified by glimmer%3B putative gene gene5939 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0156 BCG9842_0157 BCG9842_0157 BCG9842_0157 147699 147989 - hypothetical protein identified by glimmer%3B putative gene gene5940 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0157 BCG9842_0158 BCG9842_0158 BCG9842_0158 148121 148237 - hypothetical protein identified by glimmer%3B putative gene gene5941 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0158 BCG9842_0159 BCG9842_0159 BCG9842_0159 148609 149427 + conserved hypothetical protein gene gene5942 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0159 BCG9842_0160 BCG9842_0160 BCG9842_0160 149518 149697 - conserved hypothetical protein gene gene5943 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0160 BCG9842_0161 BCG9842_0161 BCG9842_0161 150119 150292 - hypothetical protein identified by glimmer%3B putative gene gene5944 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0161 BCG9842_0162 BCG9842_0162 BCG9842_0162 150360 151241 - DNA integration/recombination/invertion protein gene gene5945 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0162 BCG9842_0163 BCG9842_0163 BCG9842_0163 151396 151806 - hypothetical protein identified by glimmer%3B putative gene gene5946 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0163 BCG9842_0164 BCG9842_0164 BCG9842_0164 151857 152348 - hypothetical protein identified by glimmer%3B putative gene gene5947 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0164 BCG9842_0165 BCG9842_0165 BCG9842_0165 152446 153183 - hypothetical protein identified by glimmer%3B putative gene gene5948 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0165 BCG9842_0166 BCG9842_0166 BCG9842_0166 153316 155379 - DNA topoisomerase III identified by match to protein family HMM PF01131%3B match to protein family HMM PF01396 gene gene5949 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0166 BCG9842_0167 BCG9842_0167 BCG9842_0167 155440 155622 - hypothetical protein identified by glimmer%3B putative gene gene5950 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0167 BCG9842_0169 BCG9842_0169 BCG9842_0169 156172 156537 - DNA topoisomerase 3 gene gene5951 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0169 BCG9842_0170 BCG9842_0170 BCG9842_0170 156673 158325 - stage V sporulation protein K identified by match to protein family HMM PF00004 gene gene5952 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0170 BCG9842_0171 BCG9842_0171 BCG9842_0171 158661 158801 - hypothetical protein identified by glimmer%3B putative gene gene5953 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0171 BCG9842_0172 BCG9842_0172 BCG9842_0172 158803 159882 - hypothetical protein identified by glimmer%3B putative gene gene5954 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0172 BCG9842_0173 BCG9842_0173 BCG9842_0173 160047 161423 + NlpC/P60 family protein identified by match to protein family HMM PF00877 gene gene5955 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0173 BCG9842_0174 BCG9842_0174 BCG9842_0174 161519 162157 - leucine Rich Repeat family protein%2C putative gene gene5956 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0174 BCG9842_0175 BCG9842_0175 BCG9842_0175 162251 165397 - cell wall endopeptidase%2C family M23/M37 identified by match to protein family HMM PF00877%3B match to protein family HMM PF01551%3B match to protein family HMM PF06725 gene gene5957 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0175 BCG9842_0176 BCG9842_0176 BCG9842_0176 165401 170089 - membrane protein%2C putative an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a premature stop gene gene5958 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0176 BCG9842_0177 BCG9842_0177 BCG9842_0177 170133 172223 - conserved hypothetical protein gene gene5959 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0177 BCG9842_0178 BCG9842_0178 BCG9842_0178 172262 173167 - conserved hypothetical protein gene gene5960 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0178 BCG9842_0179 BCG9842_0179 BCG9842_0179 173181 173507 - conserved hypothetical protein gene gene5961 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0179 BCG9842_0180 BCG9842_0180 BCG9842_0180 173565 174215 - hypothetical protein identified by glimmer%3B putative gene gene5962 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0180 BCG9842_0181 BCG9842_0181 BCG9842_0181 174306 174734 - hypothetical protein identified by glimmer%3B putative gene gene5963 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0181 BCG9842_0182 BCG9842_0182 BCG9842_0182 175035 175325 + hypothetical protein identified by glimmer%3B putative gene gene5964 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0182 BCG9842_0183 BCG9842_0183 BCG9842_0183 175556 176857 - putative DNA primase gene gene5965 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0183 BCG9842_0184 BCG9842_0184 BCG9842_0184 177055 178710 - hypothetical protein identified by glimmer%3B putative gene gene5966 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0184 BCG9842_0185 BCG9842_0185 BCG9842_0185 178728 178949 - hypothetical protein identified by glimmer%3B putative gene gene5967 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0185 BCG9842_0186 BCG9842_0186 dnaN dnaN 179250 180389 + DNA polymerase III%2C beta subunit identified by match to protein family HMM PF00712%3B match to protein family HMM PF02767%3B match to protein family HMM PF02768%3B match to protein family HMM TIGR00663 gene gene5968 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0186 BCG9842_0187 BCG9842_0187 BCG9842_0187 180449 180862 + hypothetical protein identified by glimmer%3B putative gene gene5969 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0187 BCG9842_0188 BCG9842_0188 BCG9842_0188 180859 181395 + hypothetical protein identified by glimmer%3B putative gene gene5970 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0188 BCG9842_0189 BCG9842_0189 BCG9842_0189 181392 182075 + hypothetical protein identified by glimmer%3B putative gene gene5971 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0189 BCG9842_0190 BCG9842_0190 BCG9842_0190 182087 183307 + conserved hypothetical protein gene gene5972 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0190 BCG9842_0191 BCG9842_0191 BCG9842_0191 183308 184231 + ThiF family protein identified by match to protein family HMM PF00899 gene gene5973 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0191 BCG9842_0192 BCG9842_0192 BCG9842_0192 184361 185374 - hypothetical protein identified by glimmer%3B putative gene gene5974 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0192 BCG9842_0193 BCG9842_0193 BCG9842_0193 185409 186077 - hypothetical protein identified by glimmer%3B putative gene gene5975 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0193 BCG9842_0194 BCG9842_0194 BCG9842_0194 186091 186501 - conserved hypothetical protein gene gene5976 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0194 BCG9842_0195 BCG9842_0195 BCG9842_0195 186609 186860 - hypothetical protein identified by glimmer%3B putative gene gene5977 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0195 BCG9842_0196 BCG9842_0196 BCG9842_0196 186863 187108 - conserved hypothetical protein gene gene5978 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0196 BCG9842_0197 BCG9842_0197 BCG9842_0197 187173 187418 - conserved hypothetical protein gene gene5979 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0197 BCG9842_0198 BCG9842_0198 BCG9842_0198 187537 188409 - conserved hypothetical protein gene gene5980 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0198 BCG9842_0199 BCG9842_0199 BCG9842_0199 188517 189500 - conserved membrane protein%2C putative gene gene5981 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0199 BCG9842_0200 BCG9842_0200 BCG9842_0200 189502 190998 - bacterial type II/IV secretion system protein identified by match to protein family HMM PF00437 gene gene5982 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0200 BCG9842_0201 BCG9842_0201 BCG9842_0201 191035 191853 - conserved hypothetical protein gene gene5983 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0201 BCG9842_0202 BCG9842_0202 BCG9842_0202 191954 192865 - hypothetical secreted protein identified by match to protein family HMM PF08666 gene gene5984 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0202 BCG9842_0203 BCG9842_0203 BCG9842_0203 192939 193418 - hypothetical protein identified by glimmer%3B putative gene gene5985 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0203 BCG9842_0204 BCG9842_0204 BCG9842_0204 193550 196141 - hypothetical protein identified by glimmer%3B putative gene gene5986 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0204 BCG9842_0205 BCG9842_0205 BCG9842_0205 196165 196911 - hypothetical protein identified by glimmer%3B putative gene gene5987 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0205 BCG9842_0206 BCG9842_0206 BCG9842_0206 197016 197153 - hypothetical protein identified by glimmer%3B putative gene gene5988 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0206 BCG9842_0207 BCG9842_0207 BCG9842_0207 197158 197802 - conserved hypothetical protein gene gene5989 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0207 BCG9842_0208 BCG9842_0208 BCG9842_0208 197810 198358 - conserved hypothetical membrane protein%2C putative gene gene5990 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0208 BCG9842_0209 BCG9842_0209 BCG9842_0209 198497 200020 - putative FtsZ/tubulin-related protein gene gene5991 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0209 BCG9842_0210 BCG9842_0210 BCG9842_0210 200041 200469 - conserved hypothetical protein gene gene5992 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0210 BCG9842_0211 BCG9842_0211 BCG9842_0211 200653 200799 - hypothetical protein identified by glimmer%3B putative gene gene5993 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0211 BCG9842_0212 BCG9842_0212 BCG9842_0212 200819 200935 + hypothetical protein identified by glimmer%3B putative gene gene5994 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0212 BCG9842_0213 BCG9842_0213 BCG9842_0213 201443 202972 + conserved hypothetical protein gene gene5995 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0213 BCG9842_0214 BCG9842_0214 BCG9842_0214 202975 203130 - hypothetical protein identified by glimmer%3B putative gene gene5996 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0214 BCG9842_0215 BCG9842_0215 BCG9842_0215 203466 205844 + conjugation protein%2C TraG/TraD family gene gene5997 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0215 BCG9842_0216 BCG9842_0216 dnaB_3 dnaB_3 206008 207351 - replicative DNA helicase identified by match to protein family HMM PF00772%3B match to protein family HMM PF03796%3B match to protein family HMM TIGR00665 gene gene5998 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0216 BCG9842_0217 BCG9842_0217 BCG9842_0217 207748 208284 + transcription factor%2C RsfA family gene gene5999 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0217 BCG9842_0218 BCG9842_0218 BCG9842_0218 208413 209141 - conserved hypothetical protein gene gene6000 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0218 BCG9842_0219 BCG9842_0219 BCG9842_0219 678 2099 + hypothetical protein identified by glimmer%3B putative gene gene5750 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0219 BCG9842_0220 BCG9842_0220 BCG9842_0220 2688 3260 + metallophosphoesterase%2C calcineurin superfamily%2C putative identified by match to protein family HMM PF00149 gene gene5751 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0220 BCG9842_0221 BCG9842_0221 BCG9842_0221 3329 3721 + hypothetical protein identified by glimmer%3B putative gene gene5752 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0221 BCG9842_0222 BCG9842_0222 BCG9842_0222 3824 4237 + hypothetical protein identified by glimmer%3B putative gene gene5753 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0222 BCG9842_0223 BCG9842_0223 BCG9842_0223 4328 4747 + hypothetical protein identified by glimmer%3B putative gene gene5754 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0223 BCG9842_0224 BCG9842_0224 BCG9842_0224 4793 5233 + conserved hypothetical protein gene gene5755 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0224 BCG9842_0225 BCG9842_0225 BCG9842_0225 5360 5779 - hypothetical protein identified by glimmer%3B putative gene gene5756 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0225 BCG9842_0226 BCG9842_0226 BCG9842_0226 5915 6268 - hypothetical protein identified by glimmer%3B putative gene gene5757 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0226 BCG9842_0227 BCG9842_0227 BCG9842_0227 6571 6990 + hypothetical protein identified by glimmer%3B putative gene gene5758 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0227 BCG9842_0228 BCG9842_0228 BCG9842_0228 7738 7929 + hypothetical protein identified by glimmer%3B putative gene gene5759 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0228 BCG9842_0229 BCG9842_0229 BCG9842_0229 8181 8471 + hypothetical protein identified by glimmer%3B putative gene gene5760 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0229 BCG9842_0230 BCG9842_0230 BCG9842_0230 8881 9114 + hypothetical protein identified by glimmer%3B putative gene gene5761 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0230 BCG9842_0231 BCG9842_0231 BCG9842_0231 9307 9732 + hypothetical protein identified by glimmer%3B putative gene gene5762 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0231 BCG9842_0232 BCG9842_0232 BCG9842_0232 9757 9900 + hypothetical protein identified by glimmer%3B putative gene gene5763 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0232 BCG9842_0233 BCG9842_0233 BCG9842_0233 9990 10466 + conserved hypothetical protein gene gene5764 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0233 BCG9842_0234 BCG9842_0234 BCG9842_0234 10567 11292 - S-layer protein identified by match to protein family HMM PF00395 gene gene5765 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0234 BCG9842_0235 BCG9842_0235 BCG9842_0235 11553 12440 + ribosomal protein S1 domain protein gene gene5766 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0235 BCG9842_0236 BCG9842_0236 BCG9842_0236 12459 13424 + conserved hypothetical protein gene gene5767 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0236 BCG9842_0237 BCG9842_0237 BCG9842_0237 13544 13966 + hypothetical protein identified by glimmer%3B putative gene gene5768 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0237 BCG9842_0238 BCG9842_0238 BCG9842_0238 14003 15781 + hypothetical protein identified by glimmer%3B putative gene gene5769 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0238 BCG9842_0239 BCG9842_0239 BCG9842_0239 16062 16364 + hypothetical protein identified by glimmer%3B putative gene gene5770 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0239 BCG9842_0240 BCG9842_0240 BCG9842_0240 16638 17003 + hypothetical protein identified by glimmer%3B putative gene gene5771 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0240 BCG9842_0241 BCG9842_0241 BCG9842_0241 17156 17632 + conserved hypothetical protein gene gene5772 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0241 BCG9842_0242 BCG9842_0242 BCG9842_0242 17840 18247 + single-strand binding protein family identified by match to protein family HMM PF00436 gene gene5773 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0242 BCG9842_0243 BCG9842_0243 BCG9842_0243 19430 21142 - conserved hypothetical protein gene gene5774 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0243 BCG9842_0244 BCG9842_0244 BCG9842_0244 21849 23303 + hypothetical protein identified by glimmer%3B putative gene gene5775 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0244 BCG9842_0245 BCG9842_0245 BCG9842_0245 23354 25078 + conserved hypothetical protein gene gene5776 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0245 BCG9842_0246 BCG9842_0246 BCG9842_0246 25178 25567 - hypothetical protein identified by glimmer%3B putative gene gene5777 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0246 BCG9842_0247 BCG9842_0247 BCG9842_0247 25568 26035 - hypothetical protein identified by glimmer%3B putative gene gene5778 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0247 BCG9842_0248 BCG9842_0248 BCG9842_0248 26311 27057 + hypothetical protein identified by glimmer%3B putative gene gene5779 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0248 BCG9842_0249 BCG9842_0249 BCG9842_0249 27111 27710 + hypothetical protein identified by glimmer%3B putative gene gene5780 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0249 BCG9842_0250 BCG9842_0250 BCG9842_0250 27806 28891 + conserved hypothetical protein gene gene5781 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0250 BCG9842_0251 BCG9842_0251 BCG9842_0251 28964 29608 - hypothetical protein identified by glimmer%3B putative gene gene5782 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0251 BCG9842_0252 BCG9842_0252 BCG9842_0252 29610 29765 + hypothetical protein identified by glimmer%3B putative gene gene5783 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0252 BCG9842_0253 BCG9842_0253 BCG9842_0253 29838 30065 + hypothetical protein identified by glimmer%3B putative gene gene5784 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0253 BCG9842_0254 BCG9842_0254 BCG9842_0254 30210 31481 + hypothetical protein identified by glimmer%3B putative gene gene5785 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_0254 BCG9842_A0002 BCG9842_A0002 BCG9842_A0002 59426 60202 + fibronectin type III domain protein%2C putative gene gene5681 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0002 BCG9842_A0003 BCG9842_A0003 BCG9842_A0003 60214 60552 + conserved hypothetical protein gene gene5682 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0003 BCG9842_A0004 BCG9842_A0004 BCG9842_A0004 60568 61800 + hypothetical protein identified by glimmer%3B putative gene gene5683 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0004 BCG9842_A0005 BCG9842_A0005 BCG9842_A0005 61833 63830 + fibronectin type III domain protein identified by match to protein family HMM PF00041 gene gene5684 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0005 BCG9842_A0006 BCG9842_A0006 BCG9842_A0006 63845 64672 + hypothetical protein identified by glimmer%3B putative gene gene5685 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0006 BCG9842_A0007 BCG9842_A0007 BCG9842_A0007 64688 65893 + hypothetical protein identified by glimmer%3B putative gene gene5686 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0007 BCG9842_A0008 BCG9842_A0008 BCG9842_A0008 65909 66142 + conserved hypothetical protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift gene gene5687 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0008 BCG9842_A0009 BCG9842_A0009 BCG9842_A0009 66201 66470 + hypothetical protein identified by glimmer%3B putative gene gene5688 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0009 BCG9842_A0010 BCG9842_A0010 BCG9842_A0010 66703 67080 + cell wall/surface repeat protein gene gene5689 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0010 BCG9842_A0011 BCG9842_A0011 BCG9842_A0011 67098 68738 + hypothetical protein identified by glimmer%3B putative gene gene5690 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0011 BCG9842_A0012 BCG9842_A0012 BCG9842_A0012 68739 70196 + hypothetical protein identified by glimmer%3B putative gene gene5691 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0012 BCG9842_A0013 BCG9842_A0013 BCG9842_A0013 70219 72210 + F5/8 type C domain protein identified by match to protein family HMM PF00754 gene gene5692 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0013 BCG9842_A0014 BCG9842_A0014 BCG9842_A0014 72226 73827 + hypothetical protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a premature stop%3B identified by glimmer%3B putative gene gene5693 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0014 BCG9842_A0015 BCG9842_A0015 BCG9842_A0015 73847 74293 + hypothetical protein identified by glimmer%3B putative gene gene5694 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0015 BCG9842_A0016 BCG9842_A0016 BCG9842_A0016 74372 74869 + conserved hypothetical protein gene gene5695 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0016 BCG9842_A0017 BCG9842_A0017 BCG9842_A0017 74902 75525 + fibronectin type III domain protein identified by match to protein family HMM PF00041 gene gene5696 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0017 BCG9842_A0018 BCG9842_A0018 BCG9842_A0018 75809 77074 + low copy number virion structural protein%2C putative gene gene5697 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0018 BCG9842_A0019 BCG9842_A0019 BCG9842_A0019 77088 84266 + PA14 domain protein identified by match to protein family HMM PF07691 gene gene5698 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0019 BCG9842_A0020 BCG9842_A0020 BCG9842_A0020 84308 89284 + virion structural protein%2C putative gene gene5699 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0020 BCG9842_A0021 BCG9842_A0021 BCG9842_A0021 89335 90399 + hypothetical protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a premature stop%3B identified by glimmer%3B putative gene gene5700 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0021 BCG9842_A0022 BCG9842_A0022 BCG9842_A0022 90451 92916 + virion structural protein%2C putative gene gene5701 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0022 BCG9842_A0023 BCG9842_A0023 BCG9842_A0023 92918 98521 + hypothetical protein identified by glimmer%3B putative gene gene5702 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0023 BCG9842_A0024 BCG9842_A0024 BCG9842_A0024 98536 100650 + hypothetical protein identified by glimmer%3B putative gene gene5703 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0024 BCG9842_A0025 BCG9842_A0025 BCG9842_A0025 100660 101916 + hypothetical protein identified by glimmer%3B putative gene gene5704 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0025 BCG9842_A0026 BCG9842_A0026 BCG9842_A0026 101897 103150 + hypothetical protein identified by glimmer%3B putative gene gene5705 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0026 BCG9842_A0027 BCG9842_A0027 BCG9842_A0027 103171 103578 + conserved hypothetical protein gene gene5706 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0027 BCG9842_A0028 BCG9842_A0028 BCG9842_A0028 103743 104336 + hypothetical protein identified by glimmer%3B putative gene gene5707 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0028 BCG9842_A0029 BCG9842_A0029 BCG9842_A0029 104380 104733 + conserved hypothetical protein gene gene5708 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0029 BCG9842_A0030 BCG9842_A0030 BCG9842_A0030 104747 105439 + hypothetical protein identified by glimmer%3B putative gene gene5709 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0030 BCG9842_A0031 BCG9842_A0031 BCG9842_A0031 105408 106508 + hypothetical protein identified by glimmer%3B putative gene gene5710 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0031 BCG9842_A0032 BCG9842_A0032 BCG9842_A0032 106702 106959 + hypothetical protein identified by glimmer%3B putative gene gene5711 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0032 BCG9842_A0033 BCG9842_A0033 BCG9842_A0033 107083 108165 + DnaB%2C putative gene gene5712 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0033 BCG9842_A0034 BCG9842_A0034 BCG9842_A0034 108180 108473 + hypothetical protein identified by glimmer%3B putative gene gene5713 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0034 BCG9842_A0035 BCG9842_A0035 BCG9842_A0035 108487 108993 + hypothetical protein identified by glimmer%3B putative gene gene5714 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0035 BCG9842_A0036 BCG9842_A0036 BCG9842_A0036 108993 110015 + hypothetical protein identified by glimmer%3B putative gene gene5715 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0036 BCG9842_A0037 BCG9842_A0037 BCG9842_A0037 110163 110309 + hypothetical protein identified by glimmer%3B putative gene gene5716 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0037 BCG9842_A0038 BCG9842_A0038 BCG9842_A0038 110315 110842 + hypothetical protein identified by glimmer%3B putative gene gene5717 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0038 BCG9842_A0039 BCG9842_A0039 BCG9842_A0039 110871 111065 + hypothetical protein identified by glimmer%3B putative gene gene5718 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0039 BCG9842_A0040 BCG9842_A0040 BCG9842_A0040 111845 112738 + minor extracellular protease epr identified by match to protein family HMM PF00082 gene gene5719 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0040 BCG9842_A0041 BCG9842_A0041 BCG9842_A0041 112915 113049 + hypothetical protein identified by glimmer%3B putative gene gene5720 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0041 BCG9842_A0042 BCG9842_A0042 BCG9842_A0042 113131 113946 + hypothetical protein identified by glimmer%3B putative gene gene5721 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0042 BCG9842_A0043 BCG9842_A0043 BCG9842_A0043 113916 114161 + hypothetical protein identified by glimmer%3B putative gene gene5722 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0043 BCG9842_A0044 BCG9842_A0044 BCG9842_A0044 114882 115205 + protein Dvul_2085 gene gene5723 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0044 BCG9842_A0045 BCG9842_A0045 dnaE_2 dnaE_2 115228 118719 + DNA polymerase III%2C alpha subunit identified by match to protein family HMM PF01336%3B match to protein family HMM PF02811%3B match to protein family HMM PF07733%3B match to protein family HMM TIGR00594 gene gene5724 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0045 BCG9842_A0046 BCG9842_A0046 BCG9842_A0046 119042 119173 + hypothetical protein identified by glimmer%3B putative gene gene5725 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0046 BCG9842_A0047 BCG9842_A0047 BCG9842_A0047 119764 120018 + deoxyuridine 5'-triphosphate nucleotidohydrolase gene gene5726 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0047 BCG9842_A0048 BCG9842_A0048 BCG9842_A0048 120073 121167 + N-acetylmuramoyl-L-alanine amidase CwlA identified by match to protein family HMM PF01471%3B match to protein family HMM PF01510 gene gene5727 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0048 BCG9842_A0049 BCG9842_A0049 BCG9842_A0049 121342 121581 + hypothetical protein identified by glimmer%3B putative gene gene5728 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0049 BCG9842_A0050 BCG9842_A0050 BCG9842_A0050 121838 122290 + hypothetical protein identified by glimmer%3B putative gene gene5729 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0050 BCG9842_A0051 BCG9842_A0051 BCG9842_A0051 122781 123818 + replication initiation factor RepA gene gene5730 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0051 BCG9842_A0052 BCG9842_A0052 BCG9842_A0052 125108 125233 + hypothetical protein identified by glimmer%3B putative gene gene5731 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0052 BCG9842_A0053 BCG9842_A0053 BCG9842_A0053 125386 125562 + hypothetical protein identified by glimmer%3B putative gene gene5732 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0053 BCG9842_A0054 BCG9842_A0054 BCG9842_A0054 127284 127445 - hypothetical protein identified by glimmer%3B putative gene gene5733 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0054 BCG9842_A0055 BCG9842_A0055 BCG9842_A0055 128176 128349 - hypothetical protein identified by glimmer%3B putative gene gene5734 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0055 BCG9842_A0056 BCG9842_A0056 BCG9842_A0056 128783 129013 - hypothetical protein identified by glimmer%3B putative gene gene5735 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0056 BCG9842_A0057 BCG9842_A0057 BCG9842_A0057 129664 130212 - hypothetical protein identified by glimmer%3B putative gene gene5736 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0057 BCG9842_A0058 BCG9842_A0058 BCG9842_A0058 130766 131803 - hypothetical protein identified by glimmer%3B putative gene gene5737 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0058 BCG9842_A0059 BCG9842_A0059 BCG9842_A0059 132315 132563 - hypothetical protein identified by glimmer%3B putative gene gene5738 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0059 BCG9842_A0060 BCG9842_A0060 BCG9842_A0060 133346 133561 - hypothetical protein identified by glimmer%3B putative gene gene5739 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0060 BCG9842_A0061 BCG9842_A0061 BCG9842_A0061 133583 134101 - hypothetical protein identified by glimmer%3B putative gene gene5740 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0061 BCG9842_A0062 BCG9842_A0062 BCG9842_A0062 134374 134604 - MerR-family transcriptional regulator identified by match to protein family HMM PF00376 gene gene5741 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0062 BCG9842_A0063 BCG9842_A0063 BCG9842_A0063 134784 134927 - hypothetical protein identified by glimmer%3B putative gene gene5742 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0063 BCG9842_A0064 BCG9842_A0064 BCG9842_A0064 134936 135334 - hypothetical protein identified by glimmer%3B putative gene gene5743 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0064 BCG9842_A0065 BCG9842_A0065 BCG9842_A0065 135569 136270 - single-strand binding protein%2C putative identified by match to protein family HMM TIGR00621 gene gene5744 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0065 BCG9842_A0066 BCG9842_A0066 BCG9842_A0066 136511 136816 - hypothetical protein identified by glimmer%3B putative gene gene5745 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0066 BCG9842_A0067 BCG9842_A0067 BCG9842_A0067 137570 138484 - hypothetical protein identified by glimmer%3B putative gene gene5746 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0067 BCG9842_A0068 BCG9842_A0068 BCG9842_A0068 138537 138752 - hypothetical protein identified by glimmer%3B putative gene gene5747 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0068 BCG9842_A0069 BCG9842_A0069 BCG9842_A0069 138891 139082 - hypothetical protein identified by glimmer%3B putative gene gene5748 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0069 BCG9842_A0070 BCG9842_A0070 BCG9842_A0070 139175 139324 - hypothetical protein identified by glimmer%3B putative gene gene5749 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0070 BCG9842_A0071 BCG9842_A0071 BCG9842_A0071 1120 1674 + conserved hypothetical protein gene gene5630 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0071 BCG9842_A0072 BCG9842_A0072 BCG9842_A0072 2125 3531 - RecQ helicase%2C putative identified by match to protein family HMM PF00176%3B match to protein family HMM PF00271 gene gene5631 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0072 BCG9842_A0073 BCG9842_A0073 BCG9842_A0073 4114 4545 - hypothetical protein identified by glimmer%3B putative gene gene5632 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0073 BCG9842_A0074 BCG9842_A0074 BCG9842_A0074 5532 5708 - hypothetical protein identified by glimmer%3B putative gene gene5633 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0074 BCG9842_A0075 BCG9842_A0075 BCG9842_A0075 5797 6237 - HepN domain protein identified by match to protein family HMM PF05168 gene gene5634 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0075 BCG9842_A0076 BCG9842_A0076 BCG9842_A0076 6224 6556 - nucleotidyltransferase domain protein identified by match to protein family HMM PF01909 gene gene5635 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0076 BCG9842_A0077 BCG9842_A0077 BCG9842_A0077 7564 7692 + hypothetical protein identified by glimmer%3B putative gene gene5636 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0077 BCG9842_A0078 BCG9842_A0078 BCG9842_A0078 8091 8169 + tRNA-Met tRNA gene5637 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0078 BCG9842_A0079 BCG9842_A0079 BCG9842_A0079 8172 8265 + tRNA-Ile tRNA gene5638 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0079 BCG9842_A0080 BCG9842_A0080 BCG9842_A0080 8858 10039 + hypothetical protein identified by glimmer%3B putative gene gene5639 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0080 BCG9842_A0081 BCG9842_A0081 BCG9842_A0081 10039 10230 + hypothetical protein identified by glimmer%3B putative gene gene5640 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0081 BCG9842_A0082 BCG9842_A0082 BCG9842_A0082 10575 11006 + hypothetical protein identified by glimmer%3B putative gene gene5641 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0082 BCG9842_A0083 BCG9842_A0083 BCG9842_A0083 11249 11566 + hypothetical protein identified by glimmer%3B putative gene gene5642 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0083 BCG9842_A0084 BCG9842_A0084 BCG9842_A0084 11569 12360 + hypothetical protein identified by glimmer%3B putative gene gene5643 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0084 BCG9842_A0085 BCG9842_A0085 BCG9842_A0085 12373 12528 + hypothetical protein identified by glimmer%3B putative gene gene5644 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0085 BCG9842_A0086 BCG9842_A0086 BCG9842_A0086 13064 13183 + hypothetical protein identified by glimmer%3B putative gene gene5645 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0086 BCG9842_A0087 BCG9842_A0087 BCG9842_A0087 13207 13527 + hypothetical protein identified by glimmer%3B putative gene gene5646 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0087 BCG9842_A0088 BCG9842_A0088 BCG9842_A0088 13693 14967 + conserved hypothetical protein gene gene5647 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0088 BCG9842_A0089 BCG9842_A0089 BCG9842_A0089 15567 17663 + hypothetical protein identified by glimmer%3B putative gene gene5648 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0089 BCG9842_A0090 BCG9842_A0090 BCG9842_A0090 17660 19786 + hypothetical protein identified by glimmer%3B putative gene gene5649 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0090 BCG9842_A0091 BCG9842_A0091 BCG9842_A0091 19808 21613 + hypothetical protein identified by glimmer%3B putative gene gene5650 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0091 BCG9842_A0092 BCG9842_A0092 BCG9842_A0092 21629 22156 + hypothetical protein identified by glimmer%3B putative gene gene5651 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0092 BCG9842_A0093 BCG9842_A0093 BCG9842_A0093 22171 22506 + conserved hypothetical protein gene gene5652 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0093 BCG9842_A0094 BCG9842_A0094 BCG9842_A0094 22510 23448 + hypothetical protein identified by glimmer%3B putative gene gene5653 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0094 BCG9842_A0095 BCG9842_A0095 BCG9842_A0095 23508 24587 + hypothetical protein identified by glimmer%3B putative gene gene5654 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0095 BCG9842_A0096 BCG9842_A0096 BCG9842_A0096 24595 25080 + hypothetical protein identified by glimmer%3B putative gene gene5655 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0096 BCG9842_A0097 BCG9842_A0097 BCG9842_A0097 25055 26107 + hypothetical protein identified by glimmer%3B putative gene gene5656 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0097 BCG9842_A0098 BCG9842_A0098 BCG9842_A0098 26123 26809 + hypothetical protein identified by glimmer%3B putative gene gene5657 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0098 BCG9842_A0099 BCG9842_A0099 BCG9842_A0099 26841 29762 + tail sheath subunit gene gene5658 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0099 BCG9842_A0100 BCG9842_A0100 BCG9842_A0100 29834 30601 + major structural protein gene gene5659 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0100 BCG9842_A0101 BCG9842_A0101 BCG9842_A0101 30656 31540 + virion structural protein gene gene5660 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0101 BCG9842_A0102 BCG9842_A0102 BCG9842_A0102 31553 32422 + virion structural protein gene gene5661 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0102 BCG9842_A0103 BCG9842_A0103 BCG9842_A0103 32495 32992 + hypothetical tail chaperonin gene gene5662 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0103 BCG9842_A0104 BCG9842_A0104 BCG9842_A0104 33049 33813 + hypothetical protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a premature stop%3B identified by glimmer%3B putative gene gene5663 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0104 BCG9842_A0105 BCG9842_A0105 BCG9842_A0105 33850 34704 + hypothetical protein identified by glimmer%3B putative gene gene5664 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0105 BCG9842_A0106 BCG9842_A0106 BCG9842_A0106 34720 40053 + hypothetical protein identified by glimmer%3B putative gene gene5665 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0106 BCG9842_A0107 BCG9842_A0107 BCG9842_A0107 40065 46484 + baseplate hub protein%2C putative gene gene5666 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0107 BCG9842_A0108 BCG9842_A0108 BCG9842_A0108 46500 46955 + hypothetical protein identified by glimmer%3B putative gene gene5667 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0108 BCG9842_A0109 BCG9842_A0109 BCG9842_A0109 46952 47308 + hypothetical protein identified by glimmer%3B putative gene gene5668 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0109 BCG9842_A0110 BCG9842_A0110 BCG9842_A0110 47311 47712 + conserved hypothetical protein gene gene5669 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0110 BCG9842_A0111 BCG9842_A0111 BCG9842_A0111 47725 48594 + putative baseplate protein gene gene5670 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0111 BCG9842_A0112 BCG9842_A0112 BCG9842_A0112 48662 49438 + hypothetical protein identified by glimmer%3B putative gene gene5671 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0112 BCG9842_A0113 BCG9842_A0113 BCG9842_A0113 49450 49788 + hypothetical protein identified by glimmer%3B putative gene gene5672 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0113 BCG9842_A0114 BCG9842_A0114 BCG9842_A0114 49804 51003 + hypothetical protein identified by glimmer%3B putative gene gene5673 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0114 BCG9842_A0115 BCG9842_A0115 BCG9842_A0115 51054 52274 + hypothetical protein identified by glimmer%3B putative gene gene5674 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0115 BCG9842_A0116 BCG9842_A0116 BCG9842_A0116 52290 53477 + conserved hypothetical protein gene gene5675 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0116 BCG9842_A0117 BCG9842_A0117 BCG9842_A0117 53494 54771 + fibronectin type III domain protein gene gene5676 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0117 BCG9842_A0118 BCG9842_A0118 BCG9842_A0118 54784 55626 + hypothetical protein identified by glimmer%3B putative gene gene5677 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0118 BCG9842_A0119 BCG9842_A0119 BCG9842_A0119 55627 56685 + hypothetical protein identified by glimmer%3B putative gene gene5678 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0119 BCG9842_A0120 BCG9842_A0120 BCG9842_A0120 56707 58125 + hypothetical protein identified by glimmer%3B putative gene gene5679 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0120 BCG9842_A0121 BCG9842_A0121 BCG9842_A0121 58141 59229 + hypothetical protein identified by glimmer%3B putative gene gene5680 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_A0121 BCG9842_B0001 BCG9842_B0001 BCG9842_B0001 4996439 4996840 - conserved hypothetical protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift gene gene5244 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0001 BCG9842_B0002 BCG9842_B0002 smpB_1 smpB_1 4995991 4996458 - SsrA-binding protein identified by match to protein family HMM PF01668%3B match to protein family HMM TIGR00086 gene gene5243 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0002 BCG9842_B0003 BCG9842_B0003 ssrA ssrA 4995511 4995864 - tmRNA gene5242 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0003 BCG9842_B0005 BCG9842_B0005 BCG9842_B0005 4994692 4995237 + conserved hypothetical protein identified by match to protein family HMM PF04167 gene gene5241 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0005 BCG9842_B0006 BCG9842_B0006 BCG9842_B0006 4993423 4994100 - DNA-binding response regulator identified by match to protein family HMM PF00072%3B match to protein family HMM PF00486 gene gene5240 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0006 BCG9842_B0007 BCG9842_B0007 BCG9842_B0007 4992018 4993037 - iron compound ABC transporter%2C iron compound-binding protein identified by match to protein family HMM PF01497 gene gene5239 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0007 BCG9842_B0008 BCG9842_B0008 BCG9842_B0008 4990982 4991830 - iron compound ABC transporter%2C permease protein identified by match to protein family HMM PF01032 gene gene5238 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0008 BCG9842_B0009 BCG9842_B0009 BCG9842_B0009 4989921 4990985 - iron compound ABC transporter%2C permease protein identified by match to protein family HMM PF01032 gene gene5237 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0009 BCG9842_B0010 BCG9842_B0010 BCG9842_B0010 4989172 4989924 - iron compound ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005 gene gene5236 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0010 BCG9842_B0011 BCG9842_B0011 alo alo 4987199 4988737 - anthrolysin O identified by match to protein family HMM PF01289 gene gene5235 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0011 BCG9842_B0012 BCG9842_B0012 BCG9842_B0012 4985884 4987164 + xanthine/uracil permease family protein identified by match to protein family HMM PF00860%3B match to protein family HMM PF03594 gene gene5234 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0012 BCG9842_B0013 BCG9842_B0013 cynS cynS 4985286 4985756 + cyanate hydratase identified by match to protein family HMM PF02560%3B match to protein family HMM TIGR00673 gene gene5233 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0013 BCG9842_B0014 BCG9842_B0014 BCG9842_B0014 4984670 4985251 + carbonate dehydratase identified by match to protein family HMM PF00484 gene gene5232 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0014 BCG9842_B0015 BCG9842_B0015 BCG9842_B0015 4984071 4984493 - HTH-type transcriptional regulator LrpB identified by match to protein family HMM PF01037 gene gene5231 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0015 BCG9842_B0016 BCG9842_B0016 BCG9842_B0016 4982842 4983807 + putative lipoprotein gene gene5230 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0016 BCG9842_B0017 BCG9842_B0017 BCG9842_B0017 4982063 4982491 - HTH-type transcriptional regulator LrpB identified by match to protein family HMM PF01037 gene gene5229 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0017 BCG9842_B0018 BCG9842_B0018 BCG9842_B0018 4981469 4982026 + isochorismatase family protein identified by match to protein family HMM PF00857 gene gene5228 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0018 BCG9842_B0019 BCG9842_B0019 BCG9842_B0019 4980034 4980996 - nerd domain protein identified by match to protein family HMM PF08378 gene gene5227 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0019 BCG9842_B0020 BCG9842_B0020 BCG9842_B0020 4979580 4979984 - putative membrane protein identified by match to protein family HMM PF06146 gene gene5226 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0020 BCG9842_B0021 BCG9842_B0021 BCG9842_B0021 4979055 4979531 + hypothetical protein identified by glimmer%3B putative gene gene5225 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0021 BCG9842_B0022 BCG9842_B0022 speG speG 4978254 4978769 - diamine N-acetyltransferase identified by match to protein family HMM PF00583 gene gene5224 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0022 BCG9842_B0023 BCG9842_B0023 BCG9842_B0023 4976270 4977817 - ABC transporter ATP-binding protein identified by match to protein family HMM PF00005%3B match to protein family HMM PF02463 gene gene5223 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0023 BCG9842_B0024 BCG9842_B0024 BCG9842_B0024 4975071 4976264 - macrolide-efflux protein identified by match to protein family HMM PF07690 gene gene5222 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0024 BCG9842_B0025 BCG9842_B0025 BCG9842_B0025 4974678 4974890 - group-specific protein gene gene5221 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0025 BCG9842_B0026 BCG9842_B0026 BCG9842_B0026 4974359 4974598 - hypothetical protein identified by glimmer%3B putative gene gene5220 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0026 BCG9842_B0027 BCG9842_B0027 BCG9842_B0027 4973973 4974329 + crcB protein identified by match to protein family HMM PF02537 gene gene5219 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0027 BCG9842_B0028 BCG9842_B0028 BCG9842_B0028 4973542 4973976 + crcB protein identified by match to protein family HMM PF02537%3B match to protein family HMM TIGR00494 gene gene5218 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0028 BCG9842_B0029 BCG9842_B0029 BCG9842_B0029 4972168 4973226 - endonuclease/exonuclease/phosphatase family identified by match to protein family HMM PF03372 gene gene5217 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0029 BCG9842_B0030 BCG9842_B0030 BCG9842_B0030 4970633 4972135 - methyl-accepting chemotaxis protein identified by match to protein family HMM PF00015 gene gene5216 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0030 BCG9842_B0031 BCG9842_B0031 BCG9842_B0031 4970041 4970436 - SET domain protein gene gene5215 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0031 BCG9842_B0032 BCG9842_B0032 murB2 murB2 4968740 4969657 - UDP-N-acetylenolpyruvoylglucosamine reductase identified by match to protein family HMM PF01565%3B match to protein family HMM PF02873%3B match to protein family HMM TIGR00179 gene gene5214 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0032 BCG9842_B0033 BCG9842_B0033 tyrS tyrS 4967108 4968370 - tyrosyl-tRNA synthetase identified by match to protein family HMM PF00579%3B match to protein family HMM PF01479%3B match to protein family HMM TIGR00234 gene gene5213 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0033 BCG9842_B0034 BCG9842_B0034 BCG9842_B0034 4965586 4966764 + pyridine nucleotide-disulphide oxidoreductase identified by match to protein family HMM PF00070%3B match to protein family HMM PF07992 gene gene5212 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0034 BCG9842_B0035 BCG9842_B0035 BCG9842_B0035 4965101 4965541 + conserved hypothetical protein gene gene5211 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0035 BCG9842_B0036 BCG9842_B0036 BCG9842_B0036 4964323 4964667 + conserved hypothetical protein identified by match to protein family HMM PF01638 gene gene5210 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0036 BCG9842_B0037 BCG9842_B0037 BCG9842_B0037 4962786 4964000 - major facilitator family transporter identified by match to protein family HMM PF00083%3B match to protein family HMM PF07690 gene gene5209 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0037 BCG9842_B0038 BCG9842_B0038 BCG9842_B0038 4961930 4962769 - oxidoreductase%2C aldo/keto reductase family identified by match to protein family HMM PF00248 gene gene5208 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0038 BCG9842_B0039 BCG9842_B0039 BCG9842_B0039 4960893 4961816 - collagen adhesion protein gene gene5207 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0039 BCG9842_B0040 BCG9842_B0040 BCG9842_B0040 4955904 4960334 - wall-associated protein gene gene5206 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0040 BCG9842_B0041 BCG9842_B0041 BCG9842_B0041 4955222 4955860 + conserved hypothetical protein identified by match to protein family HMM PF01370 gene gene5205 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0041 BCG9842_B0042 BCG9842_B0042 BCG9842_B0042 4953491 4954921 - sodium/alanine symporter family protein identified by match to protein family HMM PF01235%3B match to protein family HMM TIGR00835 gene gene5204 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0042 BCG9842_B0043 BCG9842_B0043 BCG9842_B0043 4951713 4953155 - sodium/alanine symporter family protein identified by match to protein family HMM PF01235%3B match to protein family HMM TIGR00835 gene gene5203 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0043 BCG9842_B0044 BCG9842_B0044 BCG9842_B0044 4950201 4951382 - nucleoside transporter%2C NupC family identified by match to protein family HMM PF01773%3B match to protein family HMM PF07662%3B match to protein family HMM PF07670 gene gene5202 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0044 BCG9842_B0045 BCG9842_B0045 BCG9842_B0045 4948988 4950157 + conserved hypothetical protein identified by match to protein family HMM PF04171%3B match to protein family HMM PF04235 gene gene5201 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0045 BCG9842_B0046 BCG9842_B0046 BCG9842_B0046 4948333 4948839 + ferritin identified by match to protein family HMM PF00210 gene gene5200 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0046 BCG9842_B0047 BCG9842_B0047 BCG9842_B0047 4947956 4948279 + conserved hypothetical protein identified by match to protein family HMM PF03819 gene gene5199 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0047 BCG9842_B0048 BCG9842_B0048 BCG9842_B0048 4947304 4947882 - decarboxylase family protein identified by match to protein family HMM PF03641%3B match to protein family HMM TIGR00730 gene gene5198 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0048 BCG9842_B0049 BCG9842_B0049 BCG9842_B0049 4946918 4947199 - group-specific protein gene gene5197 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0049 BCG9842_B0050 BCG9842_B0050 BCG9842_B0050 4946705 4946902 + hypothetical protein identified by glimmer%3B putative gene gene5196 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0050 BCG9842_B0051 BCG9842_B0051 BCG9842_B0051 4946202 4946327 + conserved hypothetical protein gene gene5195 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0051 BCG9842_B0052 BCG9842_B0052 dps2 dps2 4945670 4946110 + DNA protection during starvation protein 2 identified by match to protein family HMM PF00210 gene gene5194 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0052 BCG9842_B0053 BCG9842_B0053 BCG9842_B0053 4943774 4945207 + sodium/alanine symporter family protein identified by match to protein family HMM PF01235%3B match to protein family HMM TIGR00835 gene gene5193 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0053 BCG9842_B0054 BCG9842_B0054 BCG9842_B0054 4943419 4943592 - hypothetical protein identified by glimmer%3B putative gene gene5192 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0054 BCG9842_B0055 BCG9842_B0055 BCG9842_B0055 4942870 4943364 - trkA domain protein identified by match to protein family HMM PF02080 gene gene5191 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0055 BCG9842_B0056 BCG9842_B0056 BCG9842_B0056 4941666 4942865 - sodium/hydrogen exchanger family protein identified by match to protein family HMM PF00999 gene gene5190 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0056 BCG9842_B0057 BCG9842_B0057 BCG9842_B0057 4940994 4941587 - alkaline phosphatase like protein identified by match to protein family HMM PF09335 gene gene5189 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0057 BCG9842_B0058 BCG9842_B0058 BCG9842_B0058 4940422 4940856 - hypothetical protein identified by glimmer%3B putative gene gene5188 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0058 BCG9842_B0059 BCG9842_B0059 BCG9842_B0059 4939900 4940310 - transcriptional regulator%2C MarR family identified by match to protein family HMM PF01047 gene gene5187 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0059 BCG9842_B0060 BCG9842_B0060 BCG9842_B0060 4939150 4939848 - conserved hypothetical protein identified by match to protein family HMM PF02678 gene gene5186 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0060 BCG9842_B0061 BCG9842_B0061 BCG9842_B0061 4937344 4939014 - neutral protease B identified by match to protein family HMM PF01447%3B match to protein family HMM PF02868%3B match to protein family HMM PF03413%3B match to protein family HMM PF07504 gene gene5185 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0061 BCG9842_B0062 BCG9842_B0062 BCG9842_B0062 4936825 4937142 + phenylacetic acid degradation protein PaaD identified by match to protein family HMM PF01883 gene gene5184 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0062 BCG9842_B0063 BCG9842_B0063 BCG9842_B0063 4935013 4936704 + methyl-accepting chemotaxis protein identified by match to protein family HMM PF00015%3B match to protein family HMM PF00672 gene gene5183 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0063 BCG9842_B0064 BCG9842_B0064 BCG9842_B0064 4934842 4935012 - hypothetical protein identified by glimmer%3B putative gene gene5182 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0064 BCG9842_B0065 BCG9842_B0065 BCG9842_B0065 4933106 4934800 + methyl-accepting chemotaxis protein identified by match to protein family HMM PF00015%3B match to protein family HMM PF00672 gene gene5181 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0065 BCG9842_B0066 BCG9842_B0066 BCG9842_B0066 4931874 4932692 + conserved hypothetical protein identified by match to protein family HMM PF08241%3B match to protein family HMM PF08242 gene gene5180 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0066 BCG9842_B0067 BCG9842_B0067 BCG9842_B0067 4929803 4931437 - putative methionyl-tRNA synthetase identified by match to protein family HMM PF09334%3B match to protein family HMM TIGR00398 gene gene5179 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0067 BCG9842_B0068 BCG9842_B0068 BCG9842_B0068 4929507 4929761 + conserved hypothetical protein gene gene5178 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0068 BCG9842_B0069 BCG9842_B0069 BCG9842_B0069 4928386 4929288 + transporter%2C Drug/Metabolite Exporter family identified by match to protein family HMM PF00892 gene gene5177 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0069 BCG9842_B0070 BCG9842_B0070 BCG9842_B0070 4926802 4928244 + sensor histidine kinase identified by match to protein family HMM PF00512%3B match to protein family HMM PF02518 gene gene5176 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0070 BCG9842_B0071 BCG9842_B0071 BCG9842_B0071 4926159 4926824 + DNA-binding response regulator identified by match to protein family HMM PF00072%3B match to protein family HMM PF00486 gene gene5175 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0071 BCG9842_B0072 BCG9842_B0072 BCG9842_B0072 4925333 4925794 + conserved hypothetical protein identified by match to protein family HMM PF03734 gene gene5174 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0072 BCG9842_B0073 BCG9842_B0073 BCG9842_B0073 4924859 4925302 + hypothetical protein identified by glimmer%3B putative gene gene5173 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0073 BCG9842_B0074 BCG9842_B0074 BCG9842_B0074 4923844 4924458 - dedA protein identified by match to protein family HMM PF09335 gene gene5172 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0074 BCG9842_B0075 BCG9842_B0075 BCG9842_B0075 4923392 4923613 - DNA-binding protein identified by match to protein family HMM PF01381 gene gene5171 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0075 BCG9842_B0076 BCG9842_B0076 BCG9842_B0076 4922695 4923405 - hypothetical protein identified by glimmer%3B putative gene gene5170 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0076 BCG9842_B0077 BCG9842_B0077 BCG9842_B0077 4921600 4922682 - cytolysin immunity CylI domain protein gene gene5169 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0077 BCG9842_B0078 BCG9842_B0078 BCG9842_B0078 4920729 4921115 + hypothetical protein identified by glimmer%3B putative gene gene5168 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0078 BCG9842_B0079 BCG9842_B0079 BCG9842_B0079 4919747 4920268 - ribosomal-protein-serine acetyltransferase identified by match to protein family HMM PF00583 gene gene5167 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0079 BCG9842_B0080 BCG9842_B0080 BCG9842_B0080 4918743 4919636 + conserved hypothetical protein identified by match to protein family HMM PF02588 gene gene5166 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0080 BCG9842_B0081 BCG9842_B0081 BCG9842_B0081 4918181 4918465 - hypothetical protein identified by glimmer%3B putative gene gene5165 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0081 BCG9842_B0082 BCG9842_B0082 spoIIIJ1 spoIIIJ1 4917370 4918152 - stage III sporulation protein J identified by match to protein family HMM PF02096%3B match to protein family HMM TIGR03592 gene gene5164 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0082 BCG9842_B0083 BCG9842_B0083 BCG9842_B0083 4916425 4917240 - conserved domain protein gene gene5163 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0083 BCG9842_B0084 BCG9842_B0084 BCG9842_B0084 4914488 4915651 - threonine transporter identified by match to protein family HMM PF00324 gene gene5162 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0084 BCG9842_B0085 BCG9842_B0085 BCG9842_B0085 4913196 4914368 - major facilitator family transporter identified by match to protein family HMM PF00083%3B match to protein family HMM PF07690 gene gene5161 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0085 BCG9842_B0086 BCG9842_B0086 BCG9842_B0086 4912935 4913117 - conserved hypothetical protein gene gene5160 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0086 BCG9842_B0087 BCG9842_B0087 BCG9842_B0087 4912149 4912907 + conserved hypothetical protein identified by match to protein family HMM PF01978 gene gene5159 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0087 BCG9842_B0088 BCG9842_B0088 BCG9842_B0088 4909962 4911962 - methyl-accepting chemotaxis protein identified by match to protein family HMM PF00015%3B match to protein family HMM PF00672%3B match to protein family HMM PF02743 gene gene5158 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0088 BCG9842_B0089 BCG9842_B0089 BCG9842_B0089 4909582 4909884 - conserved hypothetical protein TIGR00106 identified by match to protein family HMM PF01910%3B match to protein family HMM TIGR00106 gene gene5157 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0089 BCG9842_B0090 BCG9842_B0090 BCG9842_B0090 4909288 4909533 - conserved hypothetical protein gene gene5156 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0090 BCG9842_B0091 BCG9842_B0091 BCG9842_B0091 4908062 4908979 - proline dehydrogenase family protein identified by match to protein family HMM PF01619 gene gene5155 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0091 BCG9842_B0092 BCG9842_B0092 BCG9842_B0092 4907134 4908039 + D-alanyl-D-alanine carboxypeptidase family protein identified by match to protein family HMM PF00768%3B match to protein family HMM PF00905 gene gene5154 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0092 BCG9842_B0093 BCG9842_B0093 BCG9842_B0093 4906956 4907102 + hypothetical protein identified by glimmer%3B putative gene gene5153 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0093 BCG9842_B0094 BCG9842_B0094 BCG9842_B0094 4904337 4906718 - 3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase/isomerase family protein identified by match to protein family HMM PF00378%3B match to protein family HMM PF00725%3B match to protein family HMM PF02737 gene gene5152 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0094 BCG9842_B0095 BCG9842_B0095 BCG9842_B0095 4903143 4904315 - acetyl-CoA acetyltransferase identified by match to protein family HMM PF00108%3B match to protein family HMM PF02803%3B match to protein family HMM TIGR01930 gene gene5151 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0095 BCG9842_B0096 BCG9842_B0096 BCG9842_B0096 4901214 4902998 - acyl-CoA dehydrogenase identified by match to protein family HMM PF00441%3B match to protein family HMM PF02770%3B match to protein family HMM PF02771%3B match to protein family HMM PF08028 gene gene5150 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0096 BCG9842_B0097 BCG9842_B0097 BCG9842_B0097 4900379 4901098 - metal-dependent hydrolase identified by match to protein family HMM PF00753 gene gene5149 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0097 BCG9842_B0098 BCG9842_B0098 BCG9842_B0098 4900080 4900265 - conserved hypothetical protein gene gene5148 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0098 BCG9842_B0099 BCG9842_B0099 BCG9842_B0099 4899818 4900066 - spore coat protein F-related protein identified by match to protein family HMM PF07875 gene gene5147 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0099 BCG9842_B0100 BCG9842_B0100 ldh3 ldh3 4898622 4899572 - L-lactate dehydrogenase identified by match to protein family HMM PF00056%3B match to protein family HMM PF02866%3B match to protein family HMM TIGR01771 gene gene5146 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0100 BCG9842_B0101 BCG9842_B0101 BCG9842_B0101 4897586 4898599 - conserved hypothetical protein gene gene5145 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0101 BCG9842_B0102 BCG9842_B0102 BCG9842_B0102 4896879 4897526 + PAP2 family protein gene gene5144 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0102 BCG9842_B0103 BCG9842_B0103 BCG9842_B0103 4896207 4896734 - putative lipoprotein gene gene5143 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0103 BCG9842_B0104 BCG9842_B0104 BCG9842_B0104 4895430 4895795 - conserved hypothetical protein identified by match to protein family HMM PF03960%3B match to protein family HMM TIGR01617 gene gene5142 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0104 BCG9842_B0105 BCG9842_B0105 gcvH gcvH 4895005 4895388 - glycine cleavage system H protein identified by match to protein family HMM PF01597%3B match to protein family HMM TIGR00527 gene gene5141 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0105 BCG9842_B0106 BCG9842_B0106 BCG9842_B0106 4894269 4894820 - conserved hypothetical protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift gene gene5140 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0106 BCG9842_B0107 BCG9842_B0107 BCG9842_B0107 4893810 4894154 - Toprim domain protein identified by match to protein family HMM PF01751 gene gene5139 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0107 BCG9842_B0108 BCG9842_B0108 BCG9842_B0108 4893498 4893797 - putative thioredoxin gene gene5138 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0108 BCG9842_B0109 BCG9842_B0109 BCG9842_B0109 4893001 4893330 - hypothetical protein identified by glimmer%3B putative gene gene5137 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0109 BCG9842_B0111 BCG9842_B0111 BCG9842_B0111 4891561 4892586 - ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005%3B match to protein family HMM PF09383 gene gene5136 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0111 BCG9842_B0112 BCG9842_B0112 BCG9842_B0112 4890903 4891568 - ABC transporter%2C permease protein identified by match to protein family HMM PF00528 gene gene5135 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0112 BCG9842_B0113 BCG9842_B0113 BCG9842_B0113 4890067 4890879 - putative ABC transporter%2C substrate-binding protein identified by match to protein family HMM PF03180 gene gene5134 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0113 BCG9842_B0114 BCG9842_B0114 BCG9842_B0114 4889189 4889995 - putative ABC transporter%2C substrate-binding protein identified by match to protein family HMM PF03180 gene gene5133 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0114 BCG9842_B0115 BCG9842_B0115 sufC sufC 4888165 4888950 - FeS assembly ATPase SufC identified by match to protein family HMM PF00005%3B match to protein family HMM TIGR01978 gene gene5132 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0115 BCG9842_B0116 BCG9842_B0116 sufD sufD 4886857 4888149 - FeS assembly protein SufD identified by match to protein family HMM PF01458%3B match to protein family HMM TIGR01981 gene gene5131 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0116 BCG9842_B0117 BCG9842_B0117 sufS sufS 4885637 4886857 - cysteine desulfurase SufS identified by match to protein family HMM PF00266%3B match to protein family HMM PF01212%3B match to protein family HMM TIGR01979 gene gene5130 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0117 BCG9842_B0118 BCG9842_B0118 sufA sufA 4885216 4885647 - iron-sulfur cluster assembly scaffold SufA identified by match to protein family HMM PF01592%3B match to protein family HMM TIGR01994 gene gene5129 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0118 BCG9842_B0119 BCG9842_B0119 sufB sufB 4883770 4885167 - FeS assembly protein SufB identified by match to protein family HMM PF01458%3B match to protein family HMM TIGR01980 gene gene5128 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0119 BCG9842_B0120 BCG9842_B0120 BCG9842_B0120 4881582 4882862 - 5'-nucleotidase family protein gene gene5127 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0120 BCG9842_B0121 BCG9842_B0121 BCG9842_B0121 4881214 4881516 - conserved hypothetical protein identified by match to protein family HMM PF08827 gene gene5126 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0121 BCG9842_B0122 BCG9842_B0122 BCG9842_B0122 4880428 4881159 - conserved hypothetical protein identified by match to protein family HMM PF09560%3B match to protein family HMM TIGR02832 gene gene5125 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0122 BCG9842_B0123 BCG9842_B0123 BCG9842_B0123 4879372 4880355 + peptidase%2C M23/M37 family identified by match to protein family HMM PF01551 gene gene5124 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0123 BCG9842_B0124 BCG9842_B0124 lipA lipA 4878286 4879182 - lipoic acid synthetase identified by match to protein family HMM PF04055%3B match to protein family HMM TIGR00510 gene gene5123 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0124 BCG9842_B0125 BCG9842_B0125 BCG9842_B0125 4877786 4878265 + conserved hypothetical protein identified by match to protein family HMM PF04073 gene gene5122 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0125 BCG9842_B0126 BCG9842_B0126 BCG9842_B0126 4877157 4877711 + putative phosphoglycerate mutase family protein identified by match to protein family HMM PF00300 gene gene5121 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0126 BCG9842_B0127 BCG9842_B0127 BCG9842_B0127 4876580 4877023 - conserved hypothetical protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a premature stop gene gene5120 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0127 BCG9842_B0128 BCG9842_B0128 BCG9842_B0128 4875893 4876555 + membrane protein gene gene5119 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0128 BCG9842_B0129 BCG9842_B0129 BCG9842_B0129 4874905 4875639 - putative transcriptional activator tipA identified by match to protein family HMM PF00376%3B match to protein family HMM PF07739%3B match to protein family HMM PF09278 gene gene5118 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0129 BCG9842_B0130 BCG9842_B0130 BCG9842_B0130 4874299 4874877 + putative lipoprotein identified by match to protein family HMM PF09580 gene gene5117 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0130 BCG9842_B0131 BCG9842_B0131 BCG9842_B0131 4873872 4874180 - conserved hypothetical protein identified by match to protein family HMM PF06265 gene gene5116 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0131 BCG9842_B0132 BCG9842_B0132 BCG9842_B0132 4873329 4873826 + conserved hypothetical protein gene gene5115 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0132 BCG9842_B0133 BCG9842_B0133 BCG9842_B0133 4872689 4872955 + conserved hypothetical protein gene gene5114 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0133 BCG9842_B0134 BCG9842_B0134 fbp1 fbp1 4871701 4872672 + fructose-1%2C6-bisphosphatase%2C class II identified by match to protein family HMM PF03320%3B match to protein family HMM TIGR00330 gene gene5113 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0134 BCG9842_B0135 BCG9842_B0135 BCG9842_B0135 4871113 4871553 - conserved hypothetical protein identified by match to protein family HMM PF01934 gene gene5112 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0135 BCG9842_B0136 BCG9842_B0136 BCG9842_B0136 4870400 4871032 - transcriptional regulator%2C DeoR family identified by match to protein family HMM PF01022%3B match to protein family HMM PF08220%3B match to protein family HMM PF08279 gene gene5111 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0136 BCG9842_B0137 BCG9842_B0137 BCG9842_B0137 4869526 4870290 - phosphatase%2Chaloacid dehalogenase family identified by match to protein family HMM PF00702%3B match to protein family HMM TIGR01457%3B match to protein family HMM TIGR01460 gene gene5110 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0137 BCG9842_B0138 BCG9842_B0138 BCG9842_B0138 4868840 4869370 - conserved hypothetical protein gene gene5109 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0138 BCG9842_B0139 BCG9842_B0139 BCG9842_B0139 4868226 4868807 + NAD(P)H dehydrogenase%2C quinone family identified by match to protein family HMM PF02525%3B match to protein family HMM PF03358 gene gene5108 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0139 BCG9842_B0140 BCG9842_B0140 BCG9842_B0140 4866858 4867673 + conserved hypothetical protein identified by match to protein family HMM PF08282 gene gene5107 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0140 BCG9842_B0141 BCG9842_B0141 BCG9842_B0141 4865749 4866861 + conserved hypothetical protein gene gene5106 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0141 BCG9842_B0142 BCG9842_B0142 BCG9842_B0142 4864529 4865743 + conserved hypothetical protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift gene gene5105 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0142 BCG9842_B0143 BCG9842_B0143 BCG9842_B0143 4863349 4864452 + ATP/GTP-binding protein gene gene5104 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0143 BCG9842_B0144 BCG9842_B0144 BCG9842_B0144 4862708 4862953 - ribosomal-protein-alanine acetyltransferase an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a premature stop gene gene5103 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0144 BCG9842_B0145 BCG9842_B0145 BCG9842_B0145 4862193 4862684 + conserved hypothetical protein identified by match to protein family HMM PF04608 gene gene5102 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0145 BCG9842_B0146 BCG9842_B0146 cotS cotS 4861071 4862072 - spore coat protein cotS identified by match to protein family HMM TIGR02905 gene gene5101 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0146 BCG9842_B0147 BCG9842_B0147 BCG9842_B0147 4860796 4861011 + hypothetical protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts%3B identified by glimmer%3B putative gene gene5100 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0147 BCG9842_B0148 BCG9842_B0148 BCG9842_B0148 4860243 4860479 + nifU domain protein identified by match to protein family HMM PF01106 gene gene5099 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0148 BCG9842_B0149 BCG9842_B0149 BCG9842_B0149 4859739 4860047 - conserved hypothetical protein identified by match to protein family HMM PF07315 gene gene5098 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0149 BCG9842_B0150 BCG9842_B0150 BCG9842_B0150 4858892 4859686 - nucleotidyltransferase domain protein identified by match to protein family HMM PF01909 gene gene5097 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0150 BCG9842_B0151 BCG9842_B0151 BCG9842_B0151 4857344 4858618 - lipoprotein%2C putative gene gene5096 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0151 BCG9842_B0152 BCG9842_B0152 BCG9842_B0152 4856459 4857127 - hypothetical protein identified by glimmer%3B putative gene gene5095 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0152 BCG9842_B0153 BCG9842_B0153 BCG9842_B0153 4855644 4856447 - internalin G gene gene5094 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0153 BCG9842_B0154 BCG9842_B0154 BCG9842_B0154 4855408 4855641 + conserved hypothetical protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a premature stop gene gene5093 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0154 BCG9842_B0155 BCG9842_B0155 BCG9842_B0155 4855003 4855383 + conserved hypothetical protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a premature stop gene gene5092 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0155 BCG9842_B0156 BCG9842_B0156 BCG9842_B0156 4854546 4855016 + conserved hypothetical protein identified by match to protein family HMM PF09346 gene gene5091 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0156 BCG9842_B0157 BCG9842_B0157 BCG9842_B0157 4852801 4854459 - hypothetical protein identified by glimmer%3B putative gene gene5090 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0157 BCG9842_B0158 BCG9842_B0158 BCG9842_B0158 4851704 4852492 - hypothetical protein identified by glimmer%3B putative gene gene5089 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0158 BCG9842_B0159 BCG9842_B0159 BCG9842_B0159 4851352 4851633 - conserved hypothetical protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift gene gene5088 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0159 BCG9842_B0160 BCG9842_B0160 phnA phnA 4850851 4851192 - alkylphosphonate utilization operon protein PhnA identified by match to protein family HMM PF03831%3B match to protein family HMM PF08274%3B match to protein family HMM TIGR00686 gene gene5087 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0160 BCG9842_B0161 BCG9842_B0161 BCG9842_B0161 4849832 4850629 + conserved hypothetical protein identified by match to protein family HMM PF03649%3B match to protein family HMM TIGR00245 gene gene5086 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0161 BCG9842_B0162 BCG9842_B0162 BCG9842_B0162 4849189 4849848 + ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005 gene gene5085 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0162 BCG9842_B0163 BCG9842_B0163 BCG9842_B0163 4848961 4849134 + stage 0 sporulation regulatory protein identified by match to protein family HMM PF09388 gene gene5084 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0163 BCG9842_B0164 BCG9842_B0164 BCG9842_B0164 4847657 4848727 + pyridine nucleotide-disulphide oxidoreductase identified by match to protein family HMM PF00070%3B match to protein family HMM PF07992 gene gene5083 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0164 BCG9842_B0165 BCG9842_B0165 BCG9842_B0165 4847065 4847304 - conserved hypothetical protein identified by match to protein family HMM PF07293 gene gene5082 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0165 BCG9842_B0166 BCG9842_B0166 dapF dapF 4845960 4846826 - diaminopimelate epimerase identified by match to protein family HMM PF01678%3B match to protein family HMM TIGR00652 gene gene5081 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0166 BCG9842_B0167 BCG9842_B0167 BCG9842_B0167 4845565 4845918 - hesB/yadR/yfhF family protein identified by match to protein family HMM PF01521%3B match to protein family HMM TIGR00049 gene gene5080 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0167 BCG9842_B0168 BCG9842_B0168 BCG9842_B0168 4844896 4845459 + acetyltransferase%2C GNAT family identified by match to protein family HMM PF00583 gene gene5079 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0168 BCG9842_B0169 BCG9842_B0169 BCG9842_B0169 4843104 4843916 - conserved hypothetical protein gene gene5078 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0169 BCG9842_B0170 BCG9842_B0170 BCG9842_B0170 4842516 4842701 - O-methyltransferase an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift gene gene5077 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0170 BCG9842_B0171 BCG9842_B0171 BCG9842_B0171 4842057 4842410 - putative lipoprotein identified by match to protein family HMM PF06486%3B match to protein family HMM TIGR01655 gene gene5076 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0171 BCG9842_B0172 BCG9842_B0172 BCG9842_B0172 4841565 4842026 + conserved hypothetical protein identified by match to protein family HMM PF04463 gene gene5075 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0172 BCG9842_B0173 BCG9842_B0173 BCG9842_B0173 4840603 4841484 - conserved domain protein gene gene5074 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0173 BCG9842_B0174 BCG9842_B0174 BCG9842_B0174 4839338 4840585 + putative transporter identified by match to protein family HMM PF07690 gene gene5073 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0174 BCG9842_B0175 BCG9842_B0175 BCG9842_B0175 4838633 4839109 + conserved hypothetical protein identified by match to protein family HMM PF06445 gene gene5072 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0175 BCG9842_B0176 BCG9842_B0176 BCG9842_B0176 4837518 4838507 + pyridine nucleotide-disulphide oxidoreductase identified by match to protein family HMM PF00070%3B match to protein family HMM PF03486%3B match to protein family HMM PF07992 gene gene5071 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0176 BCG9842_B0177 BCG9842_B0177 BCG9842_B0177 4835848 4837059 - pyridine nucleotide-disulphide oxidoreductase identified by match to protein family HMM PF00070%3B match to protein family HMM PF07992 gene gene5070 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0177 BCG9842_B0178 BCG9842_B0178 BCG9842_B0178 4835218 4835724 - mutT/nudix family protein identified by match to protein family HMM PF00293 gene gene5069 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0178 BCG9842_B0179 BCG9842_B0179 BCG9842_B0179 4834904 4835221 - conserved hypothetical protein gene gene5068 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0179 BCG9842_B0180 BCG9842_B0180 BCG9842_B0180 4834191 4834817 - conserved hypothetical protein identified by match to protein family HMM PF06725 gene gene5067 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0180 BCG9842_B0181 BCG9842_B0181 pepA pepA 4832561 4834045 - leucyl aminopeptidase identified by match to protein family HMM PF00883%3B match to protein family HMM PF02789 gene gene5066 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0181 BCG9842_B0182 BCG9842_B0182 BCG9842_B0182 4831774 4832379 + conserved hypothetical protein identified by match to protein family HMM PF02457 gene gene5065 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0182 BCG9842_B0183 BCG9842_B0183 BCG9842_B0183 4829906 4831630 - phosphoglucomutase/phosphomannomutase family protein identified by match to protein family HMM PF00408%3B match to protein family HMM PF02878%3B match to protein family HMM PF02879%3B match to protein family HMM PF02880 gene gene5064 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0183 BCG9842_B0184 BCG9842_B0184 gtaB gtaB 4828911 4829801 - UTP-glucose-1-phosphate uridylyltransferase identified by match to protein family HMM PF00483%3B match to protein family HMM TIGR01099 gene gene5063 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0184 BCG9842_B0185 BCG9842_B0185 BCG9842_B0185 4828272 4828865 + bioY family protein identified by match to protein family HMM PF02632 gene gene5062 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0185 BCG9842_B0186 BCG9842_B0186 BCG9842_B0186 4827478 4828221 + conserved hypothetical protein gene gene5061 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0186 BCG9842_B0187 BCG9842_B0187 BCG9842_B0187 4826999 4827382 - putative comA operon protein identified by match to protein family HMM PF03061%3B match to protein family HMM TIGR00369 gene gene5060 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0187 BCG9842_B0188 BCG9842_B0188 glyS glyS 4825583 4826959 + glycyl-tRNA synthetase identified by match to protein family HMM PF00587%3B match to protein family HMM PF03129%3B match to protein family HMM TIGR00389 gene gene5059 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0188 BCG9842_B0189 BCG9842_B0189 BCG9842_B0189 4824523 4825236 + conserved hypothetical protein identified by match to protein family HMM PF08713 gene gene5058 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0189 BCG9842_B0190 BCG9842_B0190 BCG9842_B0190 4823938 4824405 - conserved hypothetical protein gene gene5057 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0190 BCG9842_B0191 BCG9842_B0191 BCG9842_B0191 4822533 4823858 + arsenical pump family protein identified by match to protein family HMM PF00939%3B match to protein family HMM PF02040%3B match to protein family HMM PF03600 gene gene5056 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0191 BCG9842_B0192 BCG9842_B0192 kapD kapD 4821620 4822243 - sporulation inhibitor KapD identified by match to protein family HMM PF00929 gene gene5055 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0192 BCG9842_B0193 BCG9842_B0193 BCG9842_B0193 4821195 4821578 + kinase-associated protein B identified by match to protein family HMM PF08810 gene gene5054 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0193 BCG9842_B0194 BCG9842_B0194 BCG9842_B0194 4820852 4821028 - conserved domain protein gene gene5053 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0194 BCG9842_B0195 BCG9842_B0195 sodC sodC 4820244 4820783 - superoxide dismutase%2C Cu-Zn identified by match to protein family HMM PF00080 gene gene5052 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0195 BCG9842_B0196 BCG9842_B0196 BCG9842_B0196 4818994 4820145 + aminotransferase%2C classes I and II identified by match to protein family HMM PF00155 gene gene5051 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0196 BCG9842_B0197 BCG9842_B0197 BCG9842_B0197 4818625 4818876 - conserved hypothetical protein identified by match to protein family HMM PF08958 gene gene5050 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0197 BCG9842_B0198 BCG9842_B0198 BCG9842_B0198 4817666 4818505 + hydrolase%2C alpha/beta fold family identified by match to protein family HMM PF00561 gene gene5049 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0198 BCG9842_B0199 BCG9842_B0199 BCG9842_B0199 4816564 4817556 + D-isomer specific 2-hydroxyacid dehydrogenase family protein identified by match to protein family HMM PF00389%3B match to protein family HMM PF02826 gene gene5048 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0199 BCG9842_B0200 BCG9842_B0200 BCG9842_B0200 4815948 4816445 - transcriptional regulator%2C AsnC family identified by match to protein family HMM PF01037 gene gene5047 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0200 BCG9842_B0201 BCG9842_B0201 BCG9842_B0201 4814761 4815951 - aminotransferase%2C classes I and II identified by match to protein family HMM PF00155 gene gene5046 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0201 BCG9842_B0202 BCG9842_B0202 yugI yugI 4814163 4814507 - general stress protein 13 identified by match to protein family HMM PF00575 gene gene5045 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0202 BCG9842_B0203 BCG9842_B0203 BCG9842_B0203 4813820 4814053 + conserved hypothetical protein identified by match to protein family HMM PF04070 gene gene5044 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0203 BCG9842_B0204 BCG9842_B0204 pgi pgi 4812193 4813545 - phosphoglucose isomerase identified by match to protein family HMM PF00342 gene gene5043 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0204 BCG9842_B0205 BCG9842_B0205 BCG9842_B0205 4810690 4811685 + conserved hypothetical protein identified by match to protein family HMM PF02254%3B match to protein family HMM PF07885 gene gene5041 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0205 BCG9842_B0206 BCG9842_B0206 BCG9842_B0206 4811672 4812085 - conserved hypothetical protein identified by match to protein family HMM PF08868 gene gene5042 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0206 BCG9842_B0207 BCG9842_B0207 sapB sapB 4809917 4810597 + sapB protein identified by match to protein family HMM PF02308 gene gene5040 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0207 BCG9842_B0208 BCG9842_B0208 rrs_1 rrs_1 4807978 4809486 - 16S ribosomal RNA rRNA gene5039 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0208 BCG9842_B0210 BCG9842_B0210 rrl_1 rrl_1 4804892 4807799 - 23S ribosomal RNA rRNA gene5038 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0210 BCG9842_B0211 BCG9842_B0211 rrf_1 rrf_1 4804675 4804790 - 5S ribosomal RNA rRNA gene5037 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0211 BCG9842_B0212 BCG9842_B0212 BCG9842_B0212 4804594 4804671 - tRNA-Val tRNA gene5036 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0212 BCG9842_B0213 BCG9842_B0213 BCG9842_B0213 4804515 4804590 - tRNA-Thr tRNA gene5035 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0213 BCG9842_B0214 BCG9842_B0214 BCG9842_B0214 4804428 4804505 - tRNA-His tRNA gene5034 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0214 BCG9842_B0215 BCG9842_B0215 BCG9842_B0215 4804322 4804407 - tRNA-Leu tRNA gene5033 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0215 BCG9842_B0216 BCG9842_B0216 BCG9842_B0216 4804222 4804296 - tRNA-Gly tRNA gene5032 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0216 BCG9842_B0217 BCG9842_B0217 BCG9842_B0217 4804116 4804206 - tRNA-Leu tRNA gene5031 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0217 BCG9842_B0218 BCG9842_B0218 BCG9842_B0218 4804036 4804114 - tRNA-Arg tRNA gene5030 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0218 BCG9842_B0219 BCG9842_B0219 BCG9842_B0219 4803953 4804029 - tRNA-Pro tRNA gene5029 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0219 BCG9842_B0220 BCG9842_B0220 BCG9842_B0220 4803864 4803941 - tRNA-Ala tRNA gene5028 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0220 BCG9842_B0221 BCG9842_B0221 BCG9842_B0221 4803770 4803848 - tRNA-Met tRNA gene5027 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0221 BCG9842_B0222 BCG9842_B0222 BCG9842_B0222 4803690 4803766 - tRNA-Met tRNA gene5026 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0222 BCG9842_B0223 BCG9842_B0223 BCG9842_B0223 4803580 4803672 - tRNA-Ser tRNA gene5025 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0223 BCG9842_B0224 BCG9842_B0224 BCG9842_B0224 4803474 4803552 - tRNA-Met tRNA gene5024 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0224 BCG9842_B0225 BCG9842_B0225 BCG9842_B0225 4803395 4803472 - tRNA-Asp tRNA gene5023 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0225 BCG9842_B0226 BCG9842_B0226 BCG9842_B0226 4803311 4803386 - tRNA-Phe tRNA gene5022 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0226 BCG9842_B0227 BCG9842_B0227 BCG9842_B0227 4803221 4803296 - tRNA-Thr tRNA gene5021 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0227 BCG9842_B0228 BCG9842_B0228 BCG9842_B0228 4803134 4803211 - tRNA-Lys tRNA gene5020 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0228 BCG9842_B0229 BCG9842_B0229 BCG9842_B0229 4803048 4803121 - tRNA-Gly tRNA gene5019 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0229 BCG9842_B0230 BCG9842_B0230 BCG9842_B0230 4802963 4803041 - tRNA-Ile tRNA gene5018 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0230 BCG9842_B0231 BCG9842_B0231 BCG9842_B0231 4802881 4802957 - tRNA-Asn tRNA gene5017 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0231 BCG9842_B0232 BCG9842_B0232 BCG9842_B0232 4802783 4802875 - tRNA-Ser tRNA gene5016 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0232 BCG9842_B0233 BCG9842_B0233 BCG9842_B0233 4802703 4802779 - tRNA-Glu tRNA gene5015 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0233 BCG9842_B0234 BCG9842_B0234 BCG9842_B0234 4801337 4802560 + transmembrane efflux protein identified by match to protein family HMM PF07690 gene gene5014 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0234 BCG9842_B0235 BCG9842_B0235 BCG9842_B0235 4800416 4801015 - transcriptional regulator%2C TetR family identified by match to protein family HMM PF00440 gene gene5013 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0235 BCG9842_B0236 BCG9842_B0236 ldh2 ldh2 4799007 4799951 - L-lactate dehydrogenase identified by match to protein family HMM PF00056%3B match to protein family HMM PF02866%3B match to protein family HMM TIGR01771 gene gene5012 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0236 BCG9842_B0237 BCG9842_B0237 BCG9842_B0237 4798366 4798494 + cell envelope-bound metalloprotease gene gene5011 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0237 BCG9842_B0238 BCG9842_B0238 glgB glgB 4795959 4797896 - 1%2C4-alpha-glucan branching enzyme identified by match to protein family HMM PF00128%3B match to protein family HMM PF02806%3B match to protein family HMM PF02922%3B match to protein family HMM TIGR01515 gene gene5010 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0238 BCG9842_B0239 BCG9842_B0239 glgC glgC 4794881 4795984 - glucose-1-phosphate adenylyltransferase identified by match to protein family HMM PF00483%3B match to protein family HMM TIGR02091 gene gene5009 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0239 BCG9842_B0240 BCG9842_B0240 glgD glgD 4793828 4794862 - glycogen biosynthesis protein GlgD identified by match to protein family HMM PF00132%3B match to protein family HMM TIGR02092 gene gene5008 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0240 BCG9842_B0241 BCG9842_B0241 glgA glgA 4792285 4793727 - glycogen synthase identified by match to protein family HMM PF00534%3B match to protein family HMM PF08323%3B match to protein family HMM TIGR02095 gene gene5007 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0241 BCG9842_B0242 BCG9842_B0242 glgP glgP 4789858 4792266 - glycogen phosphorylase identified by match to protein family HMM PF00343%3B match to protein family HMM TIGR02093 gene gene5006 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0242 BCG9842_B0243 BCG9842_B0243 BCG9842_B0243 4789620 4789754 + hypothetical protein identified by glimmer%3B putative gene gene5005 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0243 BCG9842_B0244 BCG9842_B0244 BCG9842_B0244 4788821 4789543 + lipase family protein identified by match to protein family HMM PF01764 gene gene5004 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0244 BCG9842_B0245 BCG9842_B0245 BCG9842_B0245 4787910 4788680 - transcriptional regulator%2C MerR family identified by match to protein family HMM PF00376%3B match to protein family HMM PF07739 gene gene5003 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0245 BCG9842_B0246 BCG9842_B0246 BCG9842_B0246 4787509 4787658 + conserved hypothetical protein gene gene5002 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0246 BCG9842_B0247 BCG9842_B0247 BCG9842_B0247 4786512 4787294 + conserved hypothetical protein identified by match to protein family HMM PF01987%3B match to protein family HMM TIGR00266 gene gene5001 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0247 BCG9842_B0248 BCG9842_B0248 cspD cspD 4785989 4786189 - cold shock protein CspD identified by match to protein family HMM PF00313 gene gene5000 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0248 BCG9842_B0249 BCG9842_B0249 BCG9842_B0249 4785213 4785944 + DNA binding protein%2C DksA/TraR family identified by match to protein family HMM TIGR02890 gene gene4999 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0249 BCG9842_B0250 BCG9842_B0250 BCG9842_B0250 4783995 4784948 + putative 1%2C4-dihydroxy-2-naphthoate octaprenyltransferase identified by match to protein family HMM PF01040%3B match to protein family HMM TIGR00751 gene gene4998 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0250 BCG9842_B0251 BCG9842_B0251 menF menF 4782406 4783800 - menaquinone-specific isochorismate synthase identified by match to protein family HMM PF00425%3B match to protein family HMM TIGR00543 gene gene4997 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0251 BCG9842_B0252 BCG9842_B0252 menD menD 4780655 4782409 - 2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase identified by match to protein family HMM PF02776%3B match to protein family HMM TIGR00173 gene gene4996 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0252 BCG9842_B0253 BCG9842_B0253 BCG9842_B0253 4779846 4780658 - hydrolase%2C alpha/beta fold family identified by match to protein family HMM PF00561 gene gene4995 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0253 BCG9842_B0254 BCG9842_B0254 menB menB 4778959 4779777 - naphthoate synthase identified by match to protein family HMM PF00378%3B match to protein family HMM TIGR01929 gene gene4994 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0254 BCG9842_B0255 BCG9842_B0255 menE menE 4777195 4778643 - O-succinylbenzoate-CoA ligase identified by match to protein family HMM PF00501%3B match to protein family HMM TIGR01923 gene gene4993 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0255 BCG9842_B0256 BCG9842_B0256 BCG9842_B0256 4776089 4777195 - N-acylamino acid racemase identified by match to protein family HMM PF01188%3B match to protein family HMM PF02746%3B match to protein family HMM TIGR01928 gene gene4992 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0256 BCG9842_B0257 BCG9842_B0257 BCG9842_B0257 4775191 4775889 - DNA-binding response regulator identified by match to protein family HMM PF00072%3B match to protein family HMM PF00486 gene gene4991 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0257 BCG9842_B0258 BCG9842_B0258 BCG9842_B0258 4774092 4775198 - sensor histidine kinase identified by match to protein family HMM PF00512%3B match to protein family HMM PF00672%3B match to protein family HMM PF02518 gene gene4990 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0258 BCG9842_B0259 BCG9842_B0259 BCG9842_B0259 4773149 4774009 - D-alanyl-D-alanine carboxypeptidase family protein identified by match to protein family HMM PF02557 gene gene4989 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0259 BCG9842_B0260 BCG9842_B0260 BCG9842_B0260 4771688 4772788 - conserved hypothetical protein identified by match to protein family HMM PF01979%3B match to protein family HMM TIGR03583 gene gene4988 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0260 BCG9842_B0261 BCG9842_B0261 BCG9842_B0261 4770607 4771710 - putative pyridoxal phosphate-dependent enzyme identified by match to protein family HMM PF01212%3B match to protein family HMM PF03841%3B match to protein family HMM TIGR01437 gene gene4987 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0261 BCG9842_B0262 BCG9842_B0262 BCG9842_B0262 4769850 4770605 - conserved hypothetical protein identified by match to protein family HMM PF07071%3B match to protein family HMM TIGR03581 gene gene4986 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0262 BCG9842_B0263 BCG9842_B0263 BCG9842_B0263 4768841 4769857 - carbohydrate kinase%2C PfkB family identified by match to protein family HMM PF00294 gene gene4985 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0263 BCG9842_B0264 BCG9842_B0264 BCG9842_B0264 4768116 4768841 - transcriptional regulator%2C GntR family identified by match to protein family HMM PF00392%3B match to protein family HMM PF07702 gene gene4984 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0264 BCG9842_B0265 BCG9842_B0265 gntP3 gntP3 4766676 4768001 - gluconate permease identified by match to protein family HMM PF02447%3B match to protein family HMM PF03600%3B match to protein family HMM TIGR00791 gene gene4983 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0265 BCG9842_B0266 BCG9842_B0266 BCG9842_B0266 4766315 4766506 - conserved hypothetical protein identified by match to protein family HMM PF09680%3B match to protein family HMM TIGR01732 gene gene4982 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0266 BCG9842_B0267 BCG9842_B0267 BCG9842_B0267 4764291 4766264 + ABC transporter%2C permease component identified by match to protein family HMM PF02687 gene gene4981 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0267 BCG9842_B0268 BCG9842_B0268 BCG9842_B0268 4763542 4764294 + ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005 gene gene4980 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0268 BCG9842_B0269 BCG9842_B0269 BCG9842_B0269 4761566 4763521 + putative permease identified by match to protein family HMM PF02687 gene gene4979 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0269 BCG9842_B0270 BCG9842_B0270 BCG9842_B0270 4759519 4761498 + putative membrane protein identified by match to protein family HMM PF02687 gene gene4978 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0270 BCG9842_B0271 BCG9842_B0271 BCG9842_B0271 4758402 4759424 + sensor histidine kinase identified by match to protein family HMM PF00512%3B match to protein family HMM PF02518 gene gene4977 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0271 BCG9842_B0272 BCG9842_B0272 BCG9842_B0272 4757704 4758399 + DNA-binding response regulator identified by match to protein family HMM PF00072%3B match to protein family HMM PF00486 gene gene4976 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0272 BCG9842_B0273 BCG9842_B0273 BCG9842_B0273 4757029 4757442 - RNA polymerase sigma-70 factor gene gene4975 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0273 BCG9842_B0274 BCG9842_B0274 BCG9842_B0274 4756638 4756910 - transcriptional regulator%2C ArsR family identified by match to protein family HMM PF01022 gene gene4974 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0274 BCG9842_B0275 BCG9842_B0275 BCG9842_B0275 4756006 4756641 - conserved membrane protein YvaZ identified by match to protein family HMM PF07853 gene gene4973 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0275 BCG9842_B0276 BCG9842_B0276 BCG9842_B0276 4755144 4755860 - ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005 gene gene4972 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0276 BCG9842_B0277 BCG9842_B0277 BCG9842_B0277 4753580 4755154 - conserved hypothetical protein gene gene4971 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0277 BCG9842_B0278 BCG9842_B0278 BCG9842_B0278 4752642 4753514 + transcriptional regulator%2C AraC family identified by match to protein family HMM PF00165%3B match to protein family HMM PF06445 gene gene4970 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0278 BCG9842_B0279 BCG9842_B0279 BCG9842_B0279 4751565 4752335 - efflux ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005 gene gene4969 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0279 BCG9842_B0280 BCG9842_B0280 BCG9842_B0280 4749629 4751578 - ABC transporter%2C permease component identified by match to protein family HMM PF02687 gene gene4968 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0280 BCG9842_B0281 BCG9842_B0281 BCG9842_B0281 4748908 4749486 - ribosomal RNA adenine dimethylase domain protein gene gene4967 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0281 BCG9842_B0282 BCG9842_B0282 BCG9842_B0282 4748294 4748908 - DedA family protein identified by match to protein family HMM PF09335 gene gene4966 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0282 BCG9842_B0283 BCG9842_B0283 BCG9842_B0283 4747564 4748265 - regulatory protein VanR identified by match to protein family HMM PF00072%3B match to protein family HMM PF00486 gene gene4965 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0283 BCG9842_B0284 BCG9842_B0284 BCG9842_B0284 4746072 4747478 - integral membrane sensor signal transduction histidine kinase identified by match to protein family HMM PF00512%3B match to protein family HMM PF00672%3B match to protein family HMM PF02518 gene gene4964 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0284 BCG9842_B0285 BCG9842_B0285 BCG9842_B0285 4745594 4745995 - YxeA identified by match to protein family HMM PF06486%3B match to protein family HMM TIGR01655 gene gene4963 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0285 BCG9842_B0286 BCG9842_B0286 mreC_1 mreC_1 4744649 4745410 - rod shape-determining protein MreC identified by match to protein family HMM PF04085%3B match to protein family HMM TIGR00219 gene gene4962 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0286 BCG9842_B0287 BCG9842_B0287 BCG9842_B0287 4743997 4744119 - hypothetical protein identified by glimmer%3B putative gene gene4961 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0287 BCG9842_B0288 BCG9842_B0288 BCG9842_B0288 4742144 4744006 - ABC transporter%2C permease identified by match to protein family HMM PF02687 gene gene4960 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0288 BCG9842_B0289 BCG9842_B0289 BCG9842_B0289 4741705 4741866 - cell wall surface anchor family protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift gene gene4959 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0289 BCG9842_B0290 BCG9842_B0290 BCG9842_B0290 4741051 4741230 + conserved domain protein gene gene4958 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0290 BCG9842_B0291 BCG9842_B0291 BCG9842_B0291 4740418 4740696 - conserved hypothetical protein gene gene4957 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0291 BCG9842_B0292 BCG9842_B0292 BCG9842_B0292 4740213 4740344 - conserved domain protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a premature stop gene gene4956 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0292 BCG9842_B0293 BCG9842_B0293 BCG9842_B0293 4739903 4740142 - conserved hypothetical protein gene gene4955 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0293 BCG9842_B0294 BCG9842_B0294 BCG9842_B0294 4738915 4739862 + conserved hypothetical protein identified by match to protein family HMM TIGR01784 gene gene4954 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0294 BCG9842_B0295 BCG9842_B0295 BCG9842_B0295 4738175 4738684 - conserved hypothetical protein gene gene4953 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0295 BCG9842_B0296 BCG9842_B0296 BCG9842_B0296 4737231 4738133 + bmrU protein identified by match to protein family HMM PF00781%3B match to protein family HMM TIGR00147 gene gene4952 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0296 BCG9842_B0297 BCG9842_B0297 hpt_1 hpt_1 4736620 4737147 + hypoxanthine phosphoribosyltransferase identified by match to protein family HMM PF00156%3B match to protein family HMM TIGR01203 gene gene4951 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0297 BCG9842_B0298 BCG9842_B0298 BCG9842_B0298 4736243 4736455 - hypothetical protein identified by glimmer%3B putative gene gene4950 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0298 BCG9842_B0299 BCG9842_B0299 BCG9842_B0299 4735728 4736060 - hypothetical protein identified by glimmer%3B putative gene gene4949 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0299 BCG9842_B0300 BCG9842_B0300 BCG9842_B0300 4735058 4735549 - cell surface protein identified by match to protein family HMM TIGR01167 gene gene4948 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0300 BCG9842_B0301 BCG9842_B0301 BCG9842_B0301 4734348 4734968 - LPXTG-site transpeptidase family protein identified by match to protein family HMM PF04203%3B match to protein family HMM TIGR01076 gene gene4947 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0301 BCG9842_B0302 BCG9842_B0302 BCG9842_B0302 4733616 4734308 - DNA-binding response regulator identified by match to protein family HMM PF00072%3B match to protein family HMM PF00486 gene gene4946 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0302 BCG9842_B0303 BCG9842_B0303 BCG9842_B0303 4731769 4733619 - sensory box histidine kinase identified by match to protein family HMM PF00512%3B match to protein family HMM PF00672%3B match to protein family HMM PF02518 gene gene4945 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0303 BCG9842_B0304 BCG9842_B0304 BCG9842_B0304 4730889 4731560 + probable proton-coupled thiamine transporter YuaJ identified by match to protein family HMM PF09515%3B match to protein family HMM TIGR02357 gene gene4944 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0304 BCG9842_B0306 BCG9842_B0306 BCG9842_B0306 4730280 4730507 - FeoA family protein identified by match to protein family HMM PF04023 gene gene4943 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0306 BCG9842_B0307 BCG9842_B0307 feoB feoB 4728295 4730283 - ferrous iron transport protein B identified by match to protein family HMM PF01926%3B match to protein family HMM PF02421%3B match to protein family HMM PF07664%3B match to protein family HMM PF07670%3B match to protein family HMM TIGR00437 gene gene4942 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0307 BCG9842_B0308 BCG9842_B0308 BCG9842_B0308 4728111 4728281 - conserved hypothetical protein gene gene4941 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0308 BCG9842_B0309 BCG9842_B0309 BCG9842_B0309 4727498 4728076 + putative lipoprotein gene gene4940 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0309 BCG9842_B0310 BCG9842_B0310 BCG9842_B0310 4726430 4727095 - conserved hypothetical protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF04012 gene gene4939 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0310 BCG9842_B0311 BCG9842_B0311 BCG9842_B0311 4725945 4726349 - conserved hypothetical protein gene gene4938 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0311 BCG9842_B0312 BCG9842_B0312 BCG9842_B0312 4725417 4725923 - hypothetical protein identified by glimmer%3B putative gene gene4937 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0312 BCG9842_B0313 BCG9842_B0313 BCG9842_B0313 4724586 4725404 - putative lipoprotein gene gene4936 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0313 BCG9842_B0314 BCG9842_B0314 BCG9842_B0314 4723298 4724170 + putative membrane protein identified by match to protein family HMM PF02588 gene gene4935 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0314 BCG9842_B0315 BCG9842_B0315 BCG9842_B0315 4722727 4723056 - conserved hypothetical protein gene gene4934 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0315 BCG9842_B0316 BCG9842_B0316 BCG9842_B0316 4721616 4722653 + conserved domain protein identified by match to protein family HMM PF02698 gene gene4933 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0316 BCG9842_B0317 BCG9842_B0317 BCG9842_B0317 4720708 4720923 - spore germination protein GerPF-like protein gene gene4932 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0317 BCG9842_B0318 BCG9842_B0318 cydB2 cydB2 4719513 4720541 + cytochrome d ubiquinol oxidase%2C subunit II identified by match to protein family HMM PF02322%3B match to protein family HMM TIGR00203 gene gene4931 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0318 BCG9842_B0319 BCG9842_B0319 cydA2 cydA2 4718174 4719523 + cytochrome d ubiquinol oxidase%2C subunit I identified by match to protein family HMM PF01654 gene gene4930 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0319 BCG9842_B0320 BCG9842_B0320 BCG9842_B0320 4717153 4717389 + conserved hypothetical protein TIGR00278 identified by match to protein family HMM PF01809%3B match to protein family HMM TIGR00278 gene gene4928 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0320 BCG9842_B0321 BCG9842_B0321 BCG9842_B0321 4717386 4717949 - putative carbonic anhydrase%2C prokaryotic type identified by match to protein family HMM PF00484 gene gene4929 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0321 BCG9842_B0322 BCG9842_B0322 luxS luxS 4716551 4717024 - autoinducer-2 production protein LuxS identified by match to protein family HMM PF02664 gene gene4927 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0322 BCG9842_B0323 BCG9842_B0323 BCG9842_B0323 4715661 4716422 - transcription regulator family identified by match to protein family HMM PF00376 gene gene4926 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0323 BCG9842_B0324 BCG9842_B0324 BCG9842_B0324 4714969 4715664 - SugE protein identified by match to protein family HMM PF00893 gene gene4925 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0324 BCG9842_B0325 BCG9842_B0325 BCG9842_B0325 4714653 4714967 - SugE protein identified by match to protein family HMM PF00893 gene gene4924 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0325 BCG9842_B0326 BCG9842_B0326 BCG9842_B0326 4713824 4714054 + conserved domain protein gene gene4923 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0326 BCG9842_B0327 BCG9842_B0327 BCG9842_B0327 4713579 4713809 + conserved hypothetical protein gene gene4922 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0327 BCG9842_B0328 BCG9842_B0328 BCG9842_B0328 4713428 4713577 + hypothetical protein identified by glimmer%3B putative gene gene4921 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0328 BCG9842_B0329 BCG9842_B0329 BCG9842_B0329 4713027 4713344 - conserved hypothetical protein gene gene4920 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0329 BCG9842_B0330 BCG9842_B0330 mutTA mutTA 4712463 4712942 - antimutator 8-oxo-(dGTP/GTP)ase identified by match to protein family HMM PF00293%3B match to protein family HMM TIGR02705 gene gene4919 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0330 BCG9842_B0331 BCG9842_B0331 BCG9842_B0331 4711813 4712349 - conserved hypothetical protein gene gene4918 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0331 BCG9842_B0332 BCG9842_B0332 BCG9842_B0332 4711056 4711727 + conserved hypothetical protein identified by match to protein family HMM PF00702%3B match to protein family HMM TIGR01509%3B match to protein family HMM TIGR01549 gene gene4917 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0332 BCG9842_B0333 BCG9842_B0333 BCG9842_B0333 4709851 4710963 - hypothetical protein identified by glimmer%3B putative gene gene4916 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0333 BCG9842_B0334 BCG9842_B0334 BCG9842_B0334 4709396 4709623 - hypothetical protein identified by glimmer%3B putative gene gene4915 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0334 BCG9842_B0335 BCG9842_B0335 BCG9842_B0335 4708555 4709361 + ABC transporter%2C permease protein identified by match to protein family HMM PF00528 gene gene4914 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0335 BCG9842_B0336 BCG9842_B0336 BCG9842_B0336 4707798 4708562 + ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005 gene gene4913 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0336 BCG9842_B0337 BCG9842_B0337 BCG9842_B0337 4706779 4707786 + putative ABC transporter%2C substrate-binding protein identified by match to protein family HMM PF09084 gene gene4912 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0337 BCG9842_B0338 BCG9842_B0338 BCG9842_B0338 4706362 4706658 - hypothetical protein identified by glimmer%3B putative gene gene4911 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0338 BCG9842_B0339 BCG9842_B0339 BCG9842_B0339 4706121 4706351 - group-specific protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift gene gene4910 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0339 BCG9842_B0340 BCG9842_B0340 BCG9842_B0340 4705343 4705759 - conserved hypothetical protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift gene gene4909 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0340 BCG9842_B0341 BCG9842_B0341 BCG9842_B0341 4704049 4705302 + conserved hypothetical protein gene gene4908 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0341 BCG9842_B0342 BCG9842_B0342 BCG9842_B0342 4701692 4703758 - phosphoglycerol transferase identified by match to protein family HMM PF00884 gene gene4907 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0342 BCG9842_B0343 BCG9842_B0343 BCG9842_B0343 4700669 4701478 + hydrolase%2C alpha/beta fold family identified by match to protein family HMM PF00561 gene gene4906 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0343 BCG9842_B0344 BCG9842_B0344 BCG9842_B0344 4698623 4700653 + catalase-2 identified by match to protein family HMM PF00199%3B match to protein family HMM PF06628 gene gene4905 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0344 BCG9842_B0345 BCG9842_B0345 BCG9842_B0345 4698121 4698441 - sensor histidine kinase an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift gene gene4904 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0345 BCG9842_B0346 BCG9842_B0346 BCG9842_B0346 4697189 4697995 - sporulation kinase an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF00512%3B match to protein family HMM PF02518 gene gene4903 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0346 BCG9842_B0347 BCG9842_B0347 BCG9842_B0347 4695972 4697192 - sporulation kinase identified by match to protein family HMM PF02518 gene gene4902 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0347 BCG9842_B0348 BCG9842_B0348 BCG9842_B0348 4692566 4695151 - conserved hypothetical protein gene gene4901 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0348 BCG9842_B0349 BCG9842_B0349 BCG9842_B0349 4692209 4692526 - conserved hypothetical protein gene gene4900 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0349 BCG9842_B0350 BCG9842_B0350 BCG9842_B0350 4691444 4692172 - cell surface protein gene gene4899 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0350 BCG9842_B0351 BCG9842_B0351 BCG9842_B0351 4690651 4691376 - cell surface protein gene gene4898 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0351 BCG9842_B0352 BCG9842_B0352 BCG9842_B0352 4689525 4690541 - cell surface protein identified by match to protein family HMM PF06030 gene gene4897 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0352 BCG9842_B0353 BCG9842_B0353 BCG9842_B0353 4689236 4689385 + hypothetical protein identified by glimmer%3B putative gene gene4896 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0353 BCG9842_B0354 BCG9842_B0354 BCG9842_B0354 4688222 4689142 + NIF3-related protein identified by match to protein family HMM PF01784 gene gene4895 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0354 BCG9842_B0355 BCG9842_B0355 BCG9842_B0355 4687525 4687848 - conserved hypothetical protein gene gene4894 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0355 BCG9842_B0356 BCG9842_B0356 BCG9842_B0356 4686411 4687316 - transporter%2C EamA family identified by match to protein family HMM PF00892 gene gene4893 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0356 BCG9842_B0357 BCG9842_B0357 BCG9842_B0357 4686161 4686382 + hypothetical protein identified by glimmer%3B putative gene gene4892 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0357 BCG9842_B0358 BCG9842_B0358 BCG9842_B0358 4686002 4686133 + hypothetical protein identified by glimmer%3B putative gene gene4891 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0358 BCG9842_B0359 BCG9842_B0359 BCG9842_B0359 4685498 4685881 - putative ATP synthase protein I identified by match to protein family HMM PF05468 gene gene4890 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0359 BCG9842_B0360 BCG9842_B0360 BCG9842_B0360 4685035 4685232 + hypothetical protein identified by glimmer%3B putative gene gene4889 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0360 BCG9842_B0361 BCG9842_B0361 pckA pckA 4683159 4684745 + phosphoenolpyruvate carboxykinase (ATP) identified by match to protein family HMM PF01293%3B match to protein family HMM TIGR00224 gene gene4888 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0361 BCG9842_B0363 BCG9842_B0363 metK metK 4681440 4682639 - S-adenosylmethionine synthetase identified by match to protein family HMM PF00438%3B match to protein family HMM PF02772%3B match to protein family HMM PF02773%3B match to protein family HMM TIGR01034 gene gene4887 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0363 BCG9842_B0364 BCG9842_B0364 BCG9842_B0364 4681219 4681398 + conserved hypothetical protein gene gene4886 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0364 BCG9842_B0365 BCG9842_B0365 BCG9842_B0365 4681033 4681212 + hypothetical protein identified by glimmer%3B putative gene gene4885 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0365 BCG9842_B0366 BCG9842_B0366 BCG9842_B0366 4680287 4680796 - molybdenum cofactor biosynthesis protein B identified by match to protein family HMM PF00994%3B match to protein family HMM TIGR00177 gene gene4884 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0366 BCG9842_B0367 BCG9842_B0367 BCG9842_B0367 4679688 4680290 - putative molybdopterin-guanine dinucleotide biosynthesis protein A gene gene4883 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0367 BCG9842_B0368 BCG9842_B0368 BCG9842_B0368 4678267 4679409 + glycosyl transferase%2C group 1 family protein identified by match to protein family HMM PF00534 gene gene4882 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0368 BCG9842_B0369 BCG9842_B0369 BCG9842_B0369 4677721 4678254 + PAP2 family protein identified by match to protein family HMM PF01569 gene gene4881 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0369 BCG9842_B0370 BCG9842_B0370 BCG9842_B0370 4677065 4677577 + bacterial transferase family protein identified by match to protein family HMM PF00132 gene gene4880 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0370 BCG9842_B0371 BCG9842_B0371 BCG9842_B0371 4676187 4676990 - conserved hypothetical protein identified by match to protein family HMM PF00561 gene gene4879 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0371 BCG9842_B0372 BCG9842_B0372 BCG9842_B0372 4675082 4676158 - conserved hypothetical protein gene gene4878 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0372 BCG9842_B0373 BCG9842_B0373 BCG9842_B0373 4673743 4675044 + conserved hypothetical protein identified by match to protein family HMM PF03929 gene gene4877 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0373 BCG9842_B0374 BCG9842_B0374 BCG9842_B0374 4672949 4673623 + probable amino-acid racemase identified by match to protein family HMM PF01177%3B match to protein family HMM TIGR00035 gene gene4876 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0374 BCG9842_B0375 BCG9842_B0375 BCG9842_B0375 4672021 4672593 + conserved hypothetical protein identified by match to protein family HMM PF06962 gene gene4875 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0375 BCG9842_B0376 BCG9842_B0376 BCG9842_B0376 4671065 4672024 + conserved hypothetical protein TIGR01212 identified by match to protein family HMM PF04055%3B match to protein family HMM TIGR01212 gene gene4874 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0376 BCG9842_B0377 BCG9842_B0377 BCG9842_B0377 4670690 4670953 - conserved hypothetical protein gene gene4873 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0377 BCG9842_B0378 BCG9842_B0378 BCG9842_B0378 4670525 4670674 - hypothetical protein identified by glimmer%3B putative gene gene4872 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0378 BCG9842_B0379 BCG9842_B0379 BCG9842_B0379 4669366 4670388 - putative membrane protein identified by match to protein family HMM PF04171%3B match to protein family HMM PF04235 gene gene4871 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0379 BCG9842_B0380 BCG9842_B0380 BCG9842_B0380 4668372 4669133 - ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005 gene gene4870 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0380 BCG9842_B0381 BCG9842_B0381 BCG9842_B0381 4666505 4668355 - ABC transporter%2C permease component identified by match to protein family HMM PF02687 gene gene4869 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0381 BCG9842_B0382 BCG9842_B0382 BCG9842_B0382 4665590 4666156 - site-specific recombinase%2C phage integrase family identified by match to protein family HMM PF00589 gene gene4868 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0382 BCG9842_B0383 BCG9842_B0383 BCG9842_B0383 4665058 4665555 - trkA domain protein identified by match to protein family HMM PF02080 gene gene4867 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0383 BCG9842_B0384 BCG9842_B0384 BCG9842_B0384 4663831 4665054 - sodium/hydrogen exchanger family protein identified by match to protein family HMM PF00999 gene gene4866 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0384 BCG9842_B0385 BCG9842_B0385 BCG9842_B0385 4662398 4663591 - putative permease identified by match to protein family HMM PF07690 gene gene4865 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0385 BCG9842_B0386 BCG9842_B0386 leuS leuS 4659517 4661925 - leucyl-tRNA synthetase identified by match to protein family HMM PF00133%3B match to protein family HMM PF08264%3B match to protein family HMM PF09334%3B match to protein family HMM TIGR00396 gene gene4864 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0386 BCG9842_B0387 BCG9842_B0387 BCG9842_B0387 4658288 4659313 - VrrB protein identified by match to protein family HMM PF01391 gene gene4863 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0387 BCG9842_B0388 BCG9842_B0388 BCG9842_B0388 4657822 4658244 + conserved hypothetical protein gene gene4862 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0388 BCG9842_B0389 BCG9842_B0389 BCG9842_B0389 4657539 4657724 + conserved domain protein gene gene4861 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0389 BCG9842_B0390 BCG9842_B0390 gerHC gerHC 4656367 4657446 + spore germination protein GerHC identified by match to protein family HMM PF05504%3B match to protein family HMM TIGR02887 gene gene4860 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0390 BCG9842_B0391 BCG9842_B0391 gerHB gerHB 4655297 4656391 + spore germination protein GerHB identified by match to protein family HMM PF03845%3B match to protein family HMM TIGR00912 gene gene4859 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0391 BCG9842_B0392 BCG9842_B0392 BCG9842_B0392 4653016 4655280 + spore germination protein IA identified by match to protein family HMM PF03323 gene gene4858 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0392 BCG9842_B0393 BCG9842_B0393 BCG9842_B0393 4651739 4652863 - putative homoserine O-acetyltransferase identified by match to protein family HMM PF00561 gene gene4857 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0393 BCG9842_B0394 BCG9842_B0394 BCG9842_B0394 4651507 4651689 + hypothetical protein identified by glimmer%3B putative gene gene4856 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0394 BCG9842_B0395 BCG9842_B0395 BCG9842_B0395 4651004 4651309 - rhodanese-like domain protein identified by match to protein family HMM PF00581 gene gene4855 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0395 BCG9842_B0396 BCG9842_B0396 BCG9842_B0396 4650701 4650925 - conserved hypothetical protein gene gene4854 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0396 BCG9842_B0397 BCG9842_B0397 BCG9842_B0397 4650357 4650614 - hypothetical protein identified by glimmer%3B putative gene gene4853 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0397 BCG9842_B0398 BCG9842_B0398 BCG9842_B0398 4647385 4650240 - collagen triple helix repeat domain protein identified by match to protein family HMM PF01391 gene gene4852 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0398 BCG9842_B0399 BCG9842_B0399 BCG9842_B0399 4646171 4647184 - molybdenum cofactor biosynthesis protein A identified by match to protein family HMM PF04055%3B match to protein family HMM PF06463%3B match to protein family HMM TIGR02666 gene gene4851 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0399 BCG9842_B0400 BCG9842_B0400 BCG9842_B0400 4645141 4646154 - putative molybdopterin biosynthesis protein MoeB identified by match to protein family HMM PF00899%3B match to protein family HMM PF05237 gene gene4850 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0400 BCG9842_B0401 BCG9842_B0401 moaC moaC 4644618 4645103 + molybdenum cofactor biosynthesis protein MoaC identified by match to protein family HMM PF01967%3B match to protein family HMM TIGR00581 gene gene4849 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0401 BCG9842_B0402 BCG9842_B0402 moeA3 moeA3 4643245 4644534 - molybdopterin biosynthesis protein MoeA identified by match to protein family HMM PF00994%3B match to protein family HMM PF03453%3B match to protein family HMM PF03454%3B match to protein family HMM TIGR00177 gene gene4848 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0402 BCG9842_B0403 BCG9842_B0403 mobB mobB 4642760 4643275 - molybdopterin-guanine dinucleotide biosynthesis protein MobB identified by match to protein family HMM PF03205%3B match to protein family HMM TIGR00176 gene gene4847 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0403 BCG9842_B0404 BCG9842_B0404 moaE3 moaE3 4642299 4642763 - molybdopterin converting factor%2C subunit 2 identified by match to protein family HMM PF02391 gene gene4846 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0404 BCG9842_B0405 BCG9842_B0405 moaD3 moaD3 4642063 4642296 - molybdopterin converting factor%2C subunit 1 identified by match to protein family HMM PF02597%3B match to protein family HMM TIGR01682 gene gene4845 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0405 BCG9842_B0406 BCG9842_B0406 BCG9842_B0406 4641556 4641969 - hypothetical protein identified by glimmer%3B putative gene gene4844 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0406 BCG9842_B0407 BCG9842_B0407 glcU glcU 4640619 4641476 - glucose uptake protein identified by match to protein family HMM PF06800%3B match to protein family HMM TIGR00776 gene gene4843 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0407 BCG9842_B0408 BCG9842_B0408 gdH gdH 4639820 4640605 - glucose 1-dehydrogenase identified by match to protein family HMM PF00106%3B match to protein family HMM PF08659 gene gene4842 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0408 BCG9842_B0409 BCG9842_B0409 BCG9842_B0409 4639255 4639749 + transcriptional regulator%2C CarD family identified by match to protein family HMM PF02559 gene gene4841 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0409 BCG9842_B0410 BCG9842_B0410 BCG9842_B0410 4638764 4639000 - conserved hypothetical protein gene gene4840 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0410 BCG9842_B0411 BCG9842_B0411 BCG9842_B0411 4638580 4638762 - conserved hypothetical protein gene gene4839 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0411 BCG9842_B0412 BCG9842_B0412 BCG9842_B0412 4638318 4638545 + hypothetical protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by glimmer%3B putative gene gene4838 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0412 BCG9842_B0413 BCG9842_B0413 BCG9842_B0413 4637465 4637896 - conserved hypothetical protein identified by match to protein family HMM PF08327 gene gene4837 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0413 BCG9842_B0414 BCG9842_B0414 BCG9842_B0414 4637141 4637464 - transcriptional regulator%2C ArsR family identified by match to protein family HMM PF01022 gene gene4836 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0414 BCG9842_B0415 BCG9842_B0415 BCG9842_B0415 4635663 4637102 + drug resistance transporter%2C EmrB/QacA family identified by match to protein family HMM PF00083%3B match to protein family HMM PF07690%3B match to protein family HMM TIGR00711 gene gene4835 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0415 BCG9842_B0416 BCG9842_B0416 BCG9842_B0416 4634188 4635459 + conserved hypothetical protein TIGR00275 identified by match to protein family HMM PF00070%3B match to protein family HMM PF00890%3B match to protein family HMM PF01134%3B match to protein family HMM PF01266%3B match to protein family HMM PF03486%3B match to protein family HMM PF07992%3B match to protein family HMM TIGR00275 gene gene4834 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0416 BCG9842_B0417 BCG9842_B0417 BCG9842_B0417 4632241 4633893 - polysaccharide synthase family protein identified by match to protein family HMM PF01943%3B match to protein family HMM PF03023 gene gene4833 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0417 BCG9842_B0418 BCG9842_B0418 BCG9842_B0418 4631471 4632199 - RNA pseudouridine synthase family protein identified by match to protein family HMM PF00849%3B match to protein family HMM PF01479%3B match to protein family HMM TIGR00093 gene gene4832 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0418 BCG9842_B0419 BCG9842_B0419 BCG9842_B0419 4631170 4631391 + transcriptional regulator%2C DeoR family identified by match to protein family HMM PF08220 gene gene4831 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0419 BCG9842_B0420 BCG9842_B0420 BCG9842_B0420 4629406 4630812 - Xaa-His dipeptidase identified by match to protein family HMM PF01546%3B match to protein family HMM PF07687%3B match to protein family HMM TIGR01887 gene gene4830 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0420 BCG9842_B0421 BCG9842_B0421 BCG9842_B0421 4628741 4629286 - putative 2'-5' RNA ligase family protein identified by match to protein family HMM PF02834%3B match to protein family HMM TIGR02258 gene gene4829 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0421 BCG9842_B0422 BCG9842_B0422 BCG9842_B0422 4626388 4628529 - putative pullulanase identified by match to protein family HMM PF00128%3B match to protein family HMM PF02922%3B match to protein family HMM TIGR02104 gene gene4828 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0422 BCG9842_B0423 BCG9842_B0423 BCG9842_B0423 4625363 4626160 - aminoglycoside phosphotransferase family protein identified by match to protein family HMM PF01636 gene gene4827 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0423 BCG9842_B0424 BCG9842_B0424 BCG9842_B0424 4625081 4625359 + conserved hypothetical protein gene gene4826 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0424 BCG9842_B0425 BCG9842_B0425 trmB trmB 4624198 4624851 - tRNA (guanine-N(7)-)-methyltransferase identified by match to protein family HMM PF02390%3B match to protein family HMM TIGR00091 gene gene4825 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0425 BCG9842_B0426 BCG9842_B0426 BCG9842_B0426 4623274 4624128 - metallo-beta-lactamase family protein identified by match to protein family HMM PF00753 gene gene4824 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0426 BCG9842_B0427 BCG9842_B0427 BCG9842_B0427 4622804 4623115 + conserved hypothetical protein identified by match to protein family HMM PF03413 gene gene4823 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0427 BCG9842_B0428 BCG9842_B0428 BCG9842_B0428 4621582 4622655 - peptidase%2C M42 family identified by match to protein family HMM PF05343 gene gene4822 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0428 BCG9842_B0429 BCG9842_B0429 BCG9842_B0429 4620790 4621299 - conserved hypothetical protein identified by match to protein family HMM PF01931 gene gene4821 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0429 BCG9842_B0430 BCG9842_B0430 BCG9842_B0430 4620393 4620707 - thioredoxin family protein identified by match to protein family HMM PF00085 gene gene4820 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0430 BCG9842_B0431 BCG9842_B0431 BCG9842_B0431 4619502 4620314 - conserved hypothetical protein identified by match to protein family HMM PF07285 gene gene4819 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0431 BCG9842_B0432 BCG9842_B0432 BCG9842_B0432 4618891 4619505 - putative tRNA binding domain protein identified by match to protein family HMM PF01588 gene gene4818 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0432 BCG9842_B0433 BCG9842_B0433 BCG9842_B0433 4618322 4618666 - hypothetical protein identified by glimmer%3B putative gene gene4817 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0433 BCG9842_B0434 BCG9842_B0434 BCG9842_B0434 4617321 4618274 - N-acetylmuramoyl-L-alanine amidase identified by match to protein family HMM PF01520 gene gene4816 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0434 BCG9842_B0435 BCG9842_B0435 BCG9842_B0435 4613096 4617166 - ftsk/spoiiie family protein identified by match to protein family HMM PF01580%3B match to protein family HMM PF09397 gene gene4815 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0435 BCG9842_B0436 BCG9842_B0436 BCG9842_B0436 4611916 4613034 - conserved hypothetical protein gene gene4814 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0436 BCG9842_B0437 BCG9842_B0437 murC murC 4610353 4611663 - UDP-N-acetylmuramate--alanine ligase identified by match to protein family HMM PF01225%3B match to protein family HMM PF02875%3B match to protein family HMM PF08245%3B match to protein family HMM TIGR01082 gene gene4813 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0437 BCG9842_B0438 BCG9842_B0438 BCG9842_B0438 4609768 4610181 - transcriptional regulator%2C MerR family identified by match to protein family HMM PF00376 gene gene4812 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0438 BCG9842_B0439 BCG9842_B0439 BCG9842_B0439 4608873 4609778 - YyaM identified by match to protein family HMM PF00892 gene gene4811 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0439 BCG9842_B0440 BCG9842_B0440 BCG9842_B0440 4608267 4608815 - ribosomal-protein-serine acetyltransferase identified by match to protein family HMM PF00583 gene gene4810 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0440 BCG9842_B0441 BCG9842_B0441 BCG9842_B0441 4607767 4608270 - acetyltransferase%2C gnat family identified by match to protein family HMM PF00583 gene gene4809 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0441 BCG9842_B0442 BCG9842_B0442 BCG9842_B0442 4607298 4607702 - group-specific protein gene gene4808 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0442 BCG9842_B0443 BCG9842_B0443 BCG9842_B0443 4606146 4607261 + putative aminopeptidase identified by match to protein family HMM PF02073 gene gene4807 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0443 BCG9842_B0444 BCG9842_B0444 BCG9842_B0444 4605446 4605958 - conserved hypothetical protein identified by match to protein family HMM PF06103 gene gene4806 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0444 BCG9842_B0445 BCG9842_B0445 BCG9842_B0445 4605120 4605446 - conserved hypothetical protein gene gene4805 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0445 BCG9842_B0446 BCG9842_B0446 BCG9842_B0446 4603980 4605002 - putative lipoprotein identified by match to protein family HMM PF07537 gene gene4804 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0446 BCG9842_B0447 BCG9842_B0447 BCG9842_B0447 4603693 4603815 - 3-deoxy-7-phosphoheptulonate synthase an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a premature stop gene gene4803 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0447 BCG9842_B0448 BCG9842_B0448 BCG9842_B0448 4603118 4603258 - protein AroA(G) an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts gene gene4802 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0448 BCG9842_B0449 BCG9842_B0449 ccpA ccpA 4601678 4602676 - catabolite control protein A identified by match to protein family HMM PF00356%3B match to protein family HMM PF00532%3B match to protein family HMM TIGR01481 gene gene4801 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0449 BCG9842_B0450 BCG9842_B0450 BCG9842_B0450 4601335 4601643 + conserved hypothetical protein gene gene4800 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0450 BCG9842_B0451 BCG9842_B0451 BCG9842_B0451 4601043 4601279 + hypothetical protein identified by glimmer%3B putative gene gene4799 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0451 BCG9842_B0452 BCG9842_B0452 BCG9842_B0452 4600666 4600800 + minD family ATPase domain protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift gene gene4798 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0452 BCG9842_B0453 BCG9842_B0453 BCG9842_B0453 4600244 4600516 - conserved domain protein gene gene4797 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0453 BCG9842_B0454 BCG9842_B0454 mscL mscL 4599797 4600195 + large conductance mechanosensitive channel protein identified by match to protein family HMM PF01741%3B match to protein family HMM TIGR00220 gene gene4796 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0454 BCG9842_B0455 BCG9842_B0455 BCG9842_B0455 4598742 4599668 + oxidoreductase%2C Gfo/Idh/MocA family identified by match to protein family HMM PF01408 gene gene4795 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0455 BCG9842_B0456 BCG9842_B0456 BCG9842_B0456 4598072 4598662 + ankyrin repeat domain protein identified by match to protein family HMM PF00023 gene gene4794 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0456 BCG9842_B0457 BCG9842_B0457 BCG9842_B0457 4596378 4597832 - sensor histidine kinase identified by match to protein family HMM PF00512%3B match to protein family HMM PF00672%3B match to protein family HMM PF02518 gene gene4793 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0457 BCG9842_B0458 BCG9842_B0458 BCG9842_B0458 4595687 4596376 - DNA-binding response regulator identified by match to protein family HMM PF00072%3B match to protein family HMM PF00486 gene gene4792 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0458 BCG9842_B0459 BCG9842_B0459 BCG9842_B0459 4595279 4595566 - hypothetical protein identified by glimmer%3B putative gene gene4791 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0459 BCG9842_B0460 BCG9842_B0460 BCG9842_B0460 4594358 4595212 + proline iminopeptidase identified by match to protein family HMM PF00561 gene gene4790 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0460 BCG9842_B0461 BCG9842_B0461 acuC acuC 4593049 4594215 + acetoin utilization protein AcuC identified by match to protein family HMM PF00850 gene gene4789 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0461 BCG9842_B0462 BCG9842_B0462 acuB acuB 4592408 4593052 + acetoin utilization protein AcuB identified by match to protein family HMM PF00571%3B match to protein family HMM PF01842 gene gene4788 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0462 BCG9842_B0463 BCG9842_B0463 acuA acuA 4591758 4592390 + acetoin utilization protein AcuA gene gene4787 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0463 BCG9842_B0464 BCG9842_B0464 acsA acsA 4589863 4591581 - acetyl-CoA synthetase identified by match to protein family HMM PF00501 gene gene4786 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0464 BCG9842_B0465 BCG9842_B0465 BCG9842_B0465 4589220 4589780 - maltose O-acetyltransferase identified by match to protein family HMM PF00132 gene gene4785 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0465 BCG9842_B0466 BCG9842_B0466 tyrS1 tyrS1 4587489 4588745 - tyrosyl-tRNA synthetase identified by match to protein family HMM PF00579%3B match to protein family HMM PF01479%3B match to protein family HMM TIGR00234 gene gene4784 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0466 BCG9842_B0467 BCG9842_B0467 BCG9842_B0467 4587232 4587360 - hypothetical protein identified by glimmer%3B putative gene gene4783 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0467 BCG9842_B0468 BCG9842_B0468 BCG9842_B0468 4586702 4587166 + conserved hypothetical protein gene gene4782 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0468 BCG9842_B0469 BCG9842_B0469 BCG9842_B0469 4585920 4586138 + conserved hypothetical protein gene gene4781 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0469 BCG9842_B0470 BCG9842_B0470 BCG9842_B0470 4584212 4585897 + hypothetical Cytosolic Protein gene gene4780 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0470 BCG9842_B0471 BCG9842_B0471 rpsD rpsD 4583111 4583713 + ribosomal protein S4 identified by match to protein family HMM PF00163%3B match to protein family HMM PF01479%3B match to protein family HMM TIGR01017 gene gene4779 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0471 BCG9842_B0472 BCG9842_B0472 megL megL 4581537 4582712 - methionine gamma-lyase identified by match to protein family HMM PF01053%3B match to protein family HMM TIGR01328 gene gene4778 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0472 BCG9842_B0473 BCG9842_B0473 BCG9842_B0473 4580995 4581474 + conserved hypothetical protein gene gene4777 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0473 BCG9842_B0474 BCG9842_B0474 BCG9842_B0474 4580209 4580847 - transcriptional regulator%2C TetR family identified by match to protein family HMM PF00440 gene gene4776 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0474 BCG9842_B0475 BCG9842_B0475 BCG9842_B0475 4579253 4580197 + transporter%2C EamA family identified by match to protein family HMM PF00892 gene gene4775 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0475 BCG9842_B0476 BCG9842_B0476 BCG9842_B0476 4578289 4579128 - transcriptional regulator%2C LysR family identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466 gene gene4774 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0476 BCG9842_B0477 BCG9842_B0477 ezrA ezrA 4576366 4578078 - septation ring formation regulator identified by match to protein family HMM PF06160 gene gene4773 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0477 BCG9842_B0478 BCG9842_B0478 BCG9842_B0478 4574843 4575985 - aminotransferase%2C class V identified by match to protein family HMM PF00266 gene gene4772 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0478 BCG9842_B0479 BCG9842_B0479 thiI thiI 4573622 4574836 - thiamine biosynthesis protein ThiI identified by match to protein family HMM PF02568%3B match to protein family HMM PF02926%3B match to protein family HMM PF06508%3B match to protein family HMM TIGR00342 gene gene4771 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0479 BCG9842_B0480 BCG9842_B0480 sspB sspB 4573344 4573541 - small%2C acid-soluble spore protein B identified by match to protein family HMM PF00269 gene gene4770 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0480 BCG9842_B0481 BCG9842_B0481 BCG9842_B0481 4571584 4573170 - putative acetyl-CoA synthetase identified by match to protein family HMM PF00501 gene gene4769 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0481 BCG9842_B0482 BCG9842_B0482 BCG9842_B0482 4571050 4571481 - conserved hypothetical protein identified by match to protein family HMM PF00903%3B match to protein family HMM PF06983 gene gene4768 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0482 BCG9842_B0483 BCG9842_B0483 BCG9842_B0483 4569412 4570980 - conserved hypothetical protein identified by match to protein family HMM PF07969 gene gene4767 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0483 BCG9842_B0484 BCG9842_B0484 BCG9842_B0484 4568491 4569294 + conserved hypothetical protein identified by match to protein family HMM PF01513 gene gene4766 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0484 BCG9842_B0485 BCG9842_B0485 BCG9842_B0485 4567647 4568276 - conserved hypothetical protein gene gene4765 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0485 BCG9842_B0486 BCG9842_B0486 BCG9842_B0486 4567239 4567634 - conserved hypothetical protein identified by match to protein family HMM PF09579%3B match to protein family HMM TIGR02874 gene gene4764 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0486 BCG9842_B0487 BCG9842_B0487 BCG9842_B0487 4566604 4567104 - thiol peroxidase identified by match to protein family HMM PF00578%3B match to protein family HMM PF08534 gene gene4763 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0487 BCG9842_B0488 BCG9842_B0488 BCG9842_B0488 4565418 4566404 - conserved hypothetical protein identified by match to protein family HMM PF02384 gene gene4762 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0488 BCG9842_B0489 BCG9842_B0489 ackA ackA 4563925 4565118 - acetate kinase identified by match to protein family HMM PF00871%3B match to protein family HMM TIGR00016 gene gene4761 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0489 BCG9842_B0490 BCG9842_B0490 BCG9842_B0490 4563467 4563901 + mutT/nudix family protein identified by match to protein family HMM PF00293 gene gene4760 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0490 BCG9842_B0491 BCG9842_B0491 BCG9842_B0491 4562760 4562948 + hypothetical protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a premature stop%3B identified by glimmer%3B putative gene gene4759 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0491 BCG9842_B0492 BCG9842_B0492 BCG9842_B0492 4561789 4562622 - conserved hypothetical protein gene gene4758 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0492 BCG9842_B0493 BCG9842_B0493 BCG9842_B0493 4561095 4561757 + conserved hypothetical protein identified by match to protein family HMM PF02588 gene gene4757 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0493 BCG9842_B0494 BCG9842_B0494 BCG9842_B0494 4560326 4560463 + hypothetical protein identified by glimmer%3B putative gene gene4756 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0494 BCG9842_B0495 BCG9842_B0495 BCG9842_B0495 4560046 4560240 - conserved hypothetical protein gene gene4755 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0495 BCG9842_B0496 BCG9842_B0496 BCG9842_B0496 4559700 4560017 + conserved hypothetical protein gene gene4754 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0496 BCG9842_B0497 BCG9842_B0497 argG argG 4558328 4559533 - argininosuccinate synthase identified by match to protein family HMM PF00764%3B match to protein family HMM TIGR00032 gene gene4753 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0497 BCG9842_B0498 BCG9842_B0498 argH2 argH2 4556943 4558331 - argininosuccinate lyase identified by match to protein family HMM PF00206%3B match to protein family HMM TIGR00838 gene gene4752 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0498 BCG9842_B0499 BCG9842_B0499 BCG9842_B0499 4556491 4556844 - conserved hypothetical protein gene gene4751 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0499 BCG9842_B0500 BCG9842_B0500 BCG9842_B0500 4556272 4556451 + proA domain protein gene gene4750 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0500 BCG9842_B0501 BCG9842_B0501 BCG9842_B0501 4555455 4555994 - group-specific protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a premature stop gene gene4749 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0501 BCG9842_B0502 BCG9842_B0502 BCG9842_B0502 4554829 4555287 + universal stress protein family identified by match to protein family HMM PF00582 gene gene4748 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0502 BCG9842_B0503 BCG9842_B0503 BCG9842_B0503 4553890 4554648 - putative 3-oxoacyl-(acyl-carrier-protein) reductase identified by match to protein family HMM PF00106 gene gene4747 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0503 BCG9842_B0504 BCG9842_B0504 ald2 ald2 4552543 4553676 - alanine dehydrogenase identified by match to protein family HMM PF01262%3B match to protein family HMM PF01488%3B match to protein family HMM PF05222%3B match to protein family HMM TIGR00518 gene gene4746 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0504 BCG9842_B0505 BCG9842_B0505 BCG9842_B0505 4551872 4552294 - hypothetical protein identified by glimmer%3B putative gene gene4745 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0505 BCG9842_B0506 BCG9842_B0506 BCG9842_B0506 4551495 4551827 - conserved hypothetical protein identified by match to protein family HMM PF07883 gene gene4744 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0506 BCG9842_B0507 BCG9842_B0507 BCG9842_B0507 4550710 4551498 - acetyltransferase%2C GNAT family identified by match to protein family HMM PF00583 gene gene4743 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0507 BCG9842_B0508 BCG9842_B0508 BCG9842_B0508 4550363 4550707 - conserved domain protein gene gene4742 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0508 BCG9842_B0509 BCG9842_B0509 BCG9842_B0509 4549943 4550092 - conserved hypothetical protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift gene gene4741 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0509 BCG9842_B0510 BCG9842_B0510 BCG9842_B0510 4549673 4549879 - conserved domain protein gene gene4740 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0510 BCG9842_B0511 BCG9842_B0511 BCG9842_B0511 4548832 4549659 + conserved hypothetical protein gene gene4739 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0511 BCG9842_B0512 BCG9842_B0512 BCG9842_B0512 4548267 4548641 - putative lipoprotein gene gene4738 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0512 BCG9842_B0513 BCG9842_B0513 BCG9842_B0513 4547890 4548246 - putative lipoprotein gene gene4737 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0513 BCG9842_B0514 BCG9842_B0514 pepQ2 pepQ2 4546762 4547859 + X-Pro dipeptidase identified by match to protein family HMM PF00557%3B match to protein family HMM PF01321 gene gene4736 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0514 BCG9842_B0515 BCG9842_B0515 BCG9842_B0515 4545929 4546612 - metallo-beta-lactamase family protein identified by match to protein family HMM PF00753 gene gene4735 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0515 BCG9842_B0516 BCG9842_B0516 BCG9842_B0516 4545727 4545888 + hypothetical protein identified by glimmer%3B putative gene gene4734 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0516 BCG9842_B0517 BCG9842_B0517 BCG9842_B0517 4544169 4545482 - thioesterase family protein identified by match to protein family HMM PF00571%3B match to protein family HMM PF03061%3B match to protein family HMM PF07085 gene gene4733 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0517 BCG9842_B0518 BCG9842_B0518 BCG9842_B0518 4543695 4543958 - group-specific protein gene gene4732 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0518 BCG9842_B0519 BCG9842_B0519 BCG9842_B0519 4543465 4543686 + conserved membrane protein YtpI gene gene4731 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0519 BCG9842_B0520 BCG9842_B0520 BCG9842_B0520 4542289 4543359 - DHH subfamily 1 protein identified by match to protein family HMM PF01368%3B match to protein family HMM PF02272 gene gene4730 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0520 BCG9842_B0521 BCG9842_B0521 BCG9842_B0521 4541734 4542237 + conserved hypothetical protein gene gene4729 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0521 BCG9842_B0522 BCG9842_B0522 BCG9842_B0522 4541399 4541737 + conserved hypothetical protein gene gene4728 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0522 BCG9842_B0523 BCG9842_B0523 dnaE_1 dnaE_1 4537955 4541281 - DNA polymerase III%2C alpha subunit identified by match to protein family HMM PF01336%3B match to protein family HMM PF02811%3B match to protein family HMM PF07733%3B match to protein family HMM TIGR00594 gene gene4727 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0523 BCG9842_B0524 BCG9842_B0524 BCG9842_B0524 4536613 4537851 - putative malate dehydrogenase identified by match to protein family HMM PF00390%3B match to protein family HMM PF03949 gene gene4726 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0524 BCG9842_B0525 BCG9842_B0525 BCG9842_B0525 4535954 4536598 - transcriptional regulator%2C GntR family identified by match to protein family HMM PF00392 gene gene4725 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0525 BCG9842_B0526 BCG9842_B0526 accD accD 4534899 4535768 - acetyl-CoA carboxylase%2C carboxyl transferase%2C beta subunit identified by match to protein family HMM TIGR00515 gene gene4724 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0526 BCG9842_B0527 BCG9842_B0527 accA accA 4533937 4534911 - acetyl-CoA carboxylase%2C carboxyl transferase%2C alpha subunit identified by match to protein family HMM PF03255%3B match to protein family HMM TIGR00513 gene gene4723 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0527 BCG9842_B0528 BCG9842_B0528 pfkA pfkA 4532849 4533808 - 6-phosphofructokinase identified by match to protein family HMM PF00365%3B match to protein family HMM TIGR02482 gene gene4722 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0528 BCG9842_B0529 BCG9842_B0529 pyk pyk 4531038 4532795 - pyruvate kinase identified by match to protein family HMM PF00224%3B match to protein family HMM PF00391%3B match to protein family HMM PF02887%3B match to protein family HMM TIGR01064 gene gene4721 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0529 BCG9842_B0530 BCG9842_B0530 BCG9842_B0530 4530453 4530842 - putative fxsA cytoplasmic membrane protein identified by match to protein family HMM PF04186 gene gene4720 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0530 BCG9842_B0531 BCG9842_B0531 ytvI ytvI 4528744 4529862 + sporulation integral membrane protein YtvI identified by match to protein family HMM PF01594%3B match to protein family HMM TIGR02872 gene gene4719 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0531 BCG9842_B0532 BCG9842_B0532 BCG9842_B0532 4528382 4528504 - hypothetical protein identified by glimmer%3B putative gene gene4718 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0532 BCG9842_B0533 BCG9842_B0533 BCG9842_B0533 4527785 4528246 - conserved hypothetical protein identified by match to protein family HMM PF04284 gene gene4717 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0533 BCG9842_B0534 BCG9842_B0534 citZ citZ 4526249 4527397 - citrate synthase CitZ identified by match to protein family HMM PF00285%3B match to protein family HMM TIGR01800 gene gene4716 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0534 BCG9842_B0535 BCG9842_B0535 citC citC 4524796 4526088 - isocitrate dehydrogenase%2C NADP-dependent identified by match to protein family HMM PF00180%3B match to protein family HMM TIGR00183 gene gene4715 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0535 BCG9842_B0536 BCG9842_B0536 mdh mdh 4523838 4524776 - malate dehydrogenase identified by match to protein family HMM PF00056%3B match to protein family HMM PF02866%3B match to protein family HMM TIGR01763 gene gene4714 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0536 BCG9842_B0537 BCG9842_B0537 BCG9842_B0537 4523149 4523622 - maoC like domain protein identified by match to protein family HMM PF01575 gene gene4713 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0537 BCG9842_B0538 BCG9842_B0538 BCG9842_B0538 4522691 4522870 - conserved domain protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts gene gene4712 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0538 BCG9842_B0539 BCG9842_B0539 phoP phoP 4521603 4522322 - DNA-binding response regulator PhoP identified by match to protein family HMM PF00072%3B match to protein family HMM PF00486 gene gene4711 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0539 BCG9842_B0540 BCG9842_B0540 phoR phoR 4519847 4521610 - sensory box histidine kinase PhoR identified by match to protein family HMM PF00512%3B match to protein family HMM PF00672%3B match to protein family HMM PF00989%3B match to protein family HMM PF02518%3B match to protein family HMM PF08448%3B match to protein family HMM TIGR00229 gene gene4710 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0540 BCG9842_B0541 BCG9842_B0541 polA polA 4516928 4519561 - DNA polymerase I identified by match to protein family HMM PF00476%3B match to protein family HMM PF01367%3B match to protein family HMM PF02739%3B match to protein family HMM TIGR00593 gene gene4709 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0541 BCG9842_B0542 BCG9842_B0542 mutM mutM 4516085 4516915 - formamidopyrimidine-DNA glycosylase identified by match to protein family HMM PF01149%3B match to protein family HMM PF06827%3B match to protein family HMM PF06831%3B match to protein family HMM TIGR00577 gene gene4708 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0542 BCG9842_B0543 BCG9842_B0543 BCG9842_B0543 4515380 4516012 - putative membrane protein identified by match to protein family HMM PF02659%3B match to protein family HMM TIGR02840 gene gene4707 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0543 BCG9842_B0544 BCG9842_B0544 BCG9842_B0544 4514726 4515328 - dephospho-CoA kinase identified by match to protein family HMM PF01121%3B match to protein family HMM TIGR00152 gene gene4706 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0544 BCG9842_B0545 BCG9842_B0545 gap1 gap1 4513588 4514616 - glyceraldehyde-3-phosphate dehydrogenase%2C type I identified by match to protein family HMM PF00044%3B match to protein family HMM PF02800%3B match to protein family HMM TIGR01534 gene gene4705 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0545 BCG9842_B0546 BCG9842_B0546 BCG9842_B0546 4513364 4513477 - hypothetical protein identified by glimmer%3B putative gene gene4704 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0546 BCG9842_B0547 BCG9842_B0547 speD1 speD1 4512817 4513209 - S-adenosylmethionine decarboxylase proenzyme identified by match to protein family HMM PF02675%3B match to protein family HMM TIGR03330 gene gene4703 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0547 BCG9842_B0548 BCG9842_B0548 nrdR nrdR 4512072 4512533 - transcriptional regulator%2C NrdR family identified by match to protein family HMM PF03477%3B match to protein family HMM TIGR00244 gene gene4702 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0548 BCG9842_B0549 BCG9842_B0549 BCG9842_B0549 4510510 4511919 - replication initiation and membrane attachment protein identified by match to protein family HMM PF07261 gene gene4701 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0549 BCG9842_B0550 BCG9842_B0550 dnaI dnaI 4509538 4510476 - primosomal protein DnaI identified by match to protein family HMM PF07319 gene gene4700 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0550 BCG9842_B0551 BCG9842_B0551 BCG9842_B0551 4508192 4509073 - conserved hypothetical protein identified by match to protein family HMM PF08812%3B match to protein family HMM TIGR02834 gene gene4699 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0551 BCG9842_B0552 BCG9842_B0552 thrS2 thrS2 4505947 4507884 - threonyl-tRNA synthetase identified by match to protein family HMM PF00587%3B match to protein family HMM PF02824%3B match to protein family HMM PF03129%3B match to protein family HMM PF07973%3B match to protein family HMM TIGR00418 gene gene4698 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0552 BCG9842_B0554 BCG9842_B0554 infC infC 4505050 4505550 - translation initiation factor IF-3 identified by match to protein family HMM PF00707%3B match to protein family HMM PF05198%3B match to protein family HMM TIGR00168 gene gene4697 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0554 BCG9842_B0555 BCG9842_B0555 rpmI rpmI 4504828 4505028 - ribosomal protein L35 identified by match to protein family HMM PF01632%3B match to protein family HMM TIGR00001 gene gene4696 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0555 BCG9842_B0556 BCG9842_B0556 rplT rplT 4504434 4504790 - ribosomal protein L20 identified by match to protein family HMM PF00453%3B match to protein family HMM TIGR01032 gene gene4695 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0556 BCG9842_B0557 BCG9842_B0557 BCG9842_B0557 4503510 4504001 - conserved hypothetical protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF08761 gene gene4694 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0557 BCG9842_B0558 BCG9842_B0558 BCG9842_B0558 4502354 4503439 - peptidase%2C M42 family identified by match to protein family HMM PF05343 gene gene4693 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0558 BCG9842_B0559 BCG9842_B0559 BCG9842_B0559 4501696 4502313 + transcriptional regulator%2C TetR family identified by match to protein family HMM PF00440 gene gene4692 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0559 BCG9842_B0560 BCG9842_B0560 BCG9842_B0560 4500746 4501399 - conserved hypothetical protein gene gene4691 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0560 BCG9842_B0561 BCG9842_B0561 BCG9842_B0561 4498934 4500733 - drug resistance transporter%2C EmrB/QacA family identified by match to protein family HMM PF07690%3B match to protein family HMM TIGR00711 gene gene4690 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0561 BCG9842_B0562 BCG9842_B0562 BCG9842_B0562 4498525 4498896 + hypothetical protein identified by glimmer%3B putative gene gene4689 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0562 BCG9842_B0563 BCG9842_B0563 BCG9842_B0563 4497621 4498337 + caax amino protease family identified by match to protein family HMM PF02517 gene gene4688 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0563 BCG9842_B0564 BCG9842_B0564 BCG9842_B0564 4496924 4497481 + HD domain protein identified by match to protein family HMM PF01966 gene gene4687 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0564 BCG9842_B0565 BCG9842_B0565 sspI sspI 4496538 4496747 + small%2C acid-soluble spore protein I identified by match to protein family HMM TIGR03092 gene gene4686 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0565 BCG9842_B0566 BCG9842_B0566 BCG9842_B0566 4495658 4496455 - RNA methyltransferase%2C TrmH family identified by match to protein family HMM PF00588%3B match to protein family HMM PF08032 gene gene4685 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0566 BCG9842_B0567 BCG9842_B0567 pheS pheS 4494302 4495336 - phenylalanyl-tRNA synthetase%2C alpha subunit identified by match to protein family HMM PF01409%3B match to protein family HMM PF02912%3B match to protein family HMM TIGR00468 gene gene4684 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0567 BCG9842_B0568 BCG9842_B0568 pheT pheT 4491863 4494283 - phenylalanyl-tRNA synthetase%2C beta subunit identified by match to protein family HMM PF01588%3B match to protein family HMM PF03147%3B match to protein family HMM PF03483%3B match to protein family HMM PF03484%3B match to protein family HMM TIGR00472 gene gene4683 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0568 BCG9842_B0569 BCG9842_B0569 asnS asnS 4490014 4491405 - asparaginyl-tRNA synthetase identified by match to protein family HMM PF00152%3B match to protein family HMM PF01336%3B match to protein family HMM TIGR00457 gene gene4682 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0569 BCG9842_B0570 BCG9842_B0570 BCG9842_B0570 4489786 4489920 - hypothetical protein identified by glimmer%3B putative gene gene4681 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0570 BCG9842_B0571 BCG9842_B0571 BCG9842_B0571 4489365 4489745 + conserved domain protein gene gene4680 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0571 BCG9842_B0572 BCG9842_B0572 rnh rnh 4488250 4489248 + ribonuclease HIII identified by match to protein family HMM PF01351%3B match to protein family HMM TIGR00716 gene gene4679 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0572 BCG9842_B0573 BCG9842_B0573 BCG9842_B0573 4487919 4488188 - conserved hypothetical protein identified by match to protein family HMM PF05164 gene gene4678 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0573 BCG9842_B0574 BCG9842_B0574 BCG9842_B0574 4487378 4487917 - cvpA family protein identified by match to protein family HMM PF02674 gene gene4677 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0574 BCG9842_B0575 BCG9842_B0575 BCG9842_B0575 4485604 4487325 - PHP domain protein identified by match to protein family HMM PF02811 gene gene4676 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0575 BCG9842_B0576 BCG9842_B0576 BCG9842_B0576 4483224 4485584 - MutS2 family protein identified by match to protein family HMM PF00488%3B match to protein family HMM PF01713%3B match to protein family HMM TIGR01069 gene gene4675 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0576 BCG9842_B0577 BCG9842_B0577 BCG9842_B0577 4482339 4483028 - RNA pseudouridine synthase family protein identified by match to protein family HMM PF00849%3B match to protein family HMM PF01479%3B match to protein family HMM TIGR00093 gene gene4674 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0577 BCG9842_B0578 BCG9842_B0578 brnQ6 brnQ6 4480534 4481859 - branched-chain amino acid transport system II carrier protein identified by match to protein family HMM PF05525%3B match to protein family HMM TIGR00796 gene gene4673 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0578 BCG9842_B0579 BCG9842_B0579 BCG9842_B0579 4479330 4480043 - iron transport associated protein identified by match to protein family HMM PF05031%3B match to protein family HMM TIGR03063 gene gene4672 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0579 BCG9842_B0580 BCG9842_B0580 BCG9842_B0580 4478848 4479306 - Iron transport-associated protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a premature stop%3B identified by match to protein family HMM PF05031 gene gene4671 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0580 BCG9842_B0581 BCG9842_B0581 BCG9842_B0581 4475998 4478823 - cell surface protein identified by match to protein family HMM PF05031%3B match to protein family HMM TIGR03063 gene gene4670 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0581 BCG9842_B0582 BCG9842_B0582 BCG9842_B0582 4475047 4475922 - iron compound ABC transporter%2C iron compound-binding protein identified by match to protein family HMM PF01497 gene gene4669 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0582 BCG9842_B0583 BCG9842_B0583 BCG9842_B0583 4474036 4475019 - iron compound ABC transporter%2C permease protein identified by match to protein family HMM PF01032 gene gene4668 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0583 BCG9842_B0584 BCG9842_B0584 BCG9842_B0584 4473276 4474046 - iron compound ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005 gene gene4667 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0584 BCG9842_B0585 BCG9842_B0585 srtB srtB 4472479 4473135 - sortase B identified by match to protein family HMM PF07170%3B match to protein family HMM TIGR03064 gene gene4666 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0585 BCG9842_B0586 BCG9842_B0586 isdG isdG 4472083 4472406 + heme oxygenase identified by match to protein family HMM PF03992 gene gene4665 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0586 BCG9842_B0587 BCG9842_B0587 BCG9842_B0587 4470589 4471788 - conserved hypothetical protein gene gene4664 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0587 BCG9842_B0588 BCG9842_B0588 BCG9842_B0588 4470355 4470549 + conserved hypothetical protein gene gene4663 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0588 BCG9842_B0589 BCG9842_B0589 BCG9842_B0589 4470181 4470354 + hypothetical protein identified by glimmer%3B putative gene gene4662 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0589 BCG9842_B0590 BCG9842_B0590 BCG9842_B0590 4469318 4470010 - DNA-binding response regulator identified by match to protein family HMM PF00072%3B match to protein family HMM PF00486 gene gene4661 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0590 BCG9842_B0591 BCG9842_B0591 BCG9842_B0591 4468381 4469316 - sensor histidine kinase identified by match to protein family HMM PF00512%3B match to protein family HMM PF02518 gene gene4660 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0591 BCG9842_B0592 BCG9842_B0592 BCG9842_B0592 4467332 4468255 - bacitracin ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005 gene gene4659 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0592 BCG9842_B0593 BCG9842_B0593 BCG9842_B0593 4467178 4467294 - hypothetical protein identified by glimmer%3B putative gene gene4658 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0593 BCG9842_B0594 BCG9842_B0594 BCG9842_B0594 4466439 4467143 - conserved hypothetical protein gene gene4657 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0594 BCG9842_B0595 BCG9842_B0595 BCG9842_B0595 4465617 4466309 - bacitracin transport permease protein bcrb gene gene4656 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0595 BCG9842_B0596 BCG9842_B0596 BCG9842_B0596 4465050 4465553 + conserved hypothetical protein identified by match to protein family HMM PF05163 gene gene4655 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0596 BCG9842_B0597 BCG9842_B0597 BCG9842_B0597 4463997 4464896 - conserved hypothetical protein gene gene4654 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0597 BCG9842_B0598 BCG9842_B0598 BCG9842_B0598 4461760 4463796 + iron compound ABC transporter%2C permease protein identified by match to protein family HMM PF01032 gene gene4653 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0598 BCG9842_B0599 BCG9842_B0599 BCG9842_B0599 4460778 4461752 + iron compound ABC transporter%2C iron compound-binding protein identified by match to protein family HMM PF01497 gene gene4652 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0599 BCG9842_B0600 BCG9842_B0600 BCG9842_B0600 4459424 4460326 - collagen triple helix repeat domain protein identified by match to protein family HMM PF01391 gene gene4651 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0600 BCG9842_B0601 BCG9842_B0601 fadD fadD 4457400 4459085 - long-chain-fatty-acid--CoA ligase identified by match to protein family HMM PF00501 gene gene4650 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0601 BCG9842_B0602 BCG9842_B0602 BCG9842_B0602 4456706 4457293 - transcriptional regulator%2C TetR family identified by match to protein family HMM PF00440%3B match to protein family HMM PF08359 gene gene4649 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0602 BCG9842_B0603 BCG9842_B0603 BCG9842_B0603 4455918 4456694 - enoyl-CoA hydratase/isomerase family protein identified by match to protein family HMM PF00378 gene gene4648 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0603 BCG9842_B0604 BCG9842_B0604 etfB etfB 4455066 4455839 - electron transfer flavoprotein%2C beta subunit identified by match to protein family HMM PF01012 gene gene4647 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0604 BCG9842_B0605 BCG9842_B0605 etfA etfA 4454052 4455029 - electron transfer flavoprotein%2C alpha subunit identified by match to protein family HMM PF00766%3B match to protein family HMM PF01012 gene gene4646 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0605 BCG9842_B0606 BCG9842_B0606 trx trx 4453526 4453840 - thioredoxin identified by match to protein family HMM PF00085%3B match to protein family HMM TIGR01068 gene gene4645 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0606 BCG9842_B0607 BCG9842_B0607 uvrC uvrC 4451592 4453376 - excinuclease ABC%2C C subunit identified by match to protein family HMM PF01541%3B match to protein family HMM PF02151%3B match to protein family HMM PF08459%3B match to protein family HMM TIGR00194 gene gene4644 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0607 BCG9842_B0608 BCG9842_B0608 BCG9842_B0608 4451027 4451476 + conserved hypothetical protein gene gene4643 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0608 BCG9842_B0609 BCG9842_B0609 sdhC sdhC 4450101 4450727 - succinate dehydrogenase%2C cytochrome b558 subunit identified by match to protein family HMM TIGR02046 gene gene4642 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0609 BCG9842_B0610 BCG9842_B0610 sdhA sdhA 4448294 4450087 - succinate dehydrogenase%2C flavoprotein subunit identified by match to protein family HMM PF00890%3B match to protein family HMM PF01134%3B match to protein family HMM PF02910%3B match to protein family HMM PF07992%3B match to protein family HMM TIGR01811 gene gene4641 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0610 BCG9842_B0611 BCG9842_B0611 sdhB sdhB 4447540 4448301 - succinate dehydrogenase%2C iron-sulfur protein identified by match to protein family HMM TIGR00384 gene gene4640 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0611 BCG9842_B0612 BCG9842_B0612 BCG9842_B0612 4447004 4447450 - putative 4-hydroxybenzoyl-CoA thioesterase identified by match to protein family HMM PF03061 gene gene4639 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0612 BCG9842_B0613 BCG9842_B0613 BCG9842_B0613 4446188 4446967 + D-alanyl-D-alanine carboxypeptidase family protein identified by match to protein family HMM PF02557 gene gene4638 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0613 BCG9842_B0614 BCG9842_B0614 BCG9842_B0614 4445128 4445922 - chemotaxis protein MotA identified by match to protein family HMM PF01618 gene gene4637 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0614 BCG9842_B0615 BCG9842_B0615 BCG9842_B0615 4444350 4445138 - chemotaxis protein MotB identified by match to protein family HMM PF00691 gene gene4636 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0615 BCG9842_B0616 BCG9842_B0616 BCG9842_B0616 4443498 4444325 + 5'-nucleotidase%2C lipoprotein e(P4) family identified by match to protein family HMM PF03767%3B match to protein family HMM TIGR01533 gene gene4635 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0616 BCG9842_B0617 BCG9842_B0617 BCG9842_B0617 4442270 4443154 - ABC transporter%2C ATP-binding protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a premature stop%3B identified by match to protein family HMM PF00005 gene gene4634 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0617 BCG9842_B0618 BCG9842_B0618 BCG9842_B0618 4441041 4442267 - sodium export permease protein gene gene4633 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0618 BCG9842_B0619 BCG9842_B0619 BCG9842_B0619 4440491 4440922 - rrf2 family protein identified by match to protein family HMM PF02082 gene gene4632 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0619 BCG9842_B0620 BCG9842_B0620 BCG9842_B0620 4439766 4440431 + aquaporin Z identified by match to protein family HMM PF00230 gene gene4631 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0620 BCG9842_B0621 BCG9842_B0621 BCG9842_B0621 4438657 4439622 + putative membrane protein gene gene4630 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0621 BCG9842_B0622 BCG9842_B0622 BCG9842_B0622 4437984 4438556 - DNA-binding protein identified by match to protein family HMM PF01381%3B match to protein family HMM PF07883 gene gene4629 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0622 BCG9842_B0623 BCG9842_B0623 BCG9842_B0623 4437737 4437922 + conserved hypothetical protein identified by match to protein family HMM PF04024 gene gene4628 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0623 BCG9842_B0624 BCG9842_B0624 BCG9842_B0624 4436312 4437553 - cytosine deaminase identified by match to protein family HMM PF07969 gene gene4627 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0624 BCG9842_B0625 BCG9842_B0625 BCG9842_B0625 4434918 4436204 - xanthine permease identified by match to protein family HMM PF00860 gene gene4626 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0625 BCG9842_B0626 BCG9842_B0626 gerE gerE 4434528 4434752 - germination protein GerE identified by match to protein family HMM PF00196%3B match to protein family HMM PF08281 gene gene4625 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0626 BCG9842_B0627 BCG9842_B0627 BCG9842_B0627 4433758 4434417 - thiJ/pfpI family protein identified by match to protein family HMM PF01965 gene gene4624 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0627 BCG9842_B0628 BCG9842_B0628 BCG9842_B0628 4432827 4433465 - transcriptional regulator%2C TetR family identified by match to protein family HMM PF00440 gene gene4623 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0628 BCG9842_B0629 BCG9842_B0629 BCG9842_B0629 4432277 4432777 + thiJ/pfpI family protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF01965 gene gene4622 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0629 BCG9842_B0630 BCG9842_B0630 BCG9842_B0630 4430377 4431702 - major facilitator family transporter identified by match to protein family HMM PF07690 gene gene4621 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0630 BCG9842_B0631 BCG9842_B0631 BCG9842_B0631 4430201 4430317 - hypothetical protein identified by glimmer%3B putative gene gene4620 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0631 BCG9842_B0632 BCG9842_B0632 racE2 racE2 4429354 4430163 - glutamate racemase identified by match to protein family HMM PF01177%3B match to protein family HMM TIGR00067 gene gene4619 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0632 BCG9842_B0633 BCG9842_B0633 gerM gerM 4428120 4429169 - germination protein gerM gene gene4618 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0633 BCG9842_B0634 BCG9842_B0634 rph rph 4427251 4427988 - ribonuclease PH identified by match to protein family HMM PF01138%3B match to protein family HMM PF03725%3B match to protein family HMM TIGR01966 gene gene4617 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0634 BCG9842_B0635 BCG9842_B0635 BCG9842_B0635 4426631 4427239 - HAM1 protein identified by match to protein family HMM PF01725%3B match to protein family HMM TIGR00042 gene gene4616 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0635 BCG9842_B0636 BCG9842_B0636 BCG9842_B0636 4426114 4426617 - putative phosphoesterase identified by match to protein family HMM PF00149%3B match to protein family HMM TIGR00040 gene gene4615 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0636 BCG9842_B0637 BCG9842_B0637 BCG9842_B0637 4425932 4426005 - tRNA-Gly tRNA gene4614 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0637 BCG9842_B0638 BCG9842_B0638 BCG9842_B0638 4425853 4425931 - tRNA-Arg tRNA gene4613 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0638 BCG9842_B0639 BCG9842_B0639 BCG9842_B0639 4425110 4425310 - hypothetical protein identified by glimmer%3B putative gene gene4612 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0639 BCG9842_B0640 BCG9842_B0640 BCG9842_B0640 4424406 4425020 + conserved hypothetical protein gene gene4611 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0640 BCG9842_B0641 BCG9842_B0641 BCG9842_B0641 4423638 4423886 - hypothetical protein identified by glimmer%3B putative gene gene4610 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0641 BCG9842_B0642 BCG9842_B0642 BCG9842_B0642 4422442 4423440 - conserved hypothetical protein gene gene4609 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0642 BCG9842_B0643 BCG9842_B0643 tig tig 4420855 4422132 - trigger factor identified by match to protein family HMM PF00254%3B match to protein family HMM PF05697%3B match to protein family HMM PF05698%3B match to protein family HMM TIGR00115 gene gene4608 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0643 BCG9842_B0644 BCG9842_B0644 clpX clpX 4419331 4420590 - ATP-dependent Clp protease%2C ATP-binding subunit ClpX identified by match to protein family HMM PF00004%3B match to protein family HMM PF06689%3B match to protein family HMM PF07724%3B match to protein family HMM TIGR00382 gene gene4607 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0644 BCG9842_B0645 BCG9842_B0645 lonB lonB 4417554 4419224 - ATP-dependent protease LonB identified by match to protein family HMM PF00004%3B match to protein family HMM PF01078%3B match to protein family HMM PF05362%3B match to protein family HMM TIGR02902 gene gene4606 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0645 BCG9842_B0646 BCG9842_B0646 loN loN 4415041 4417371 - ATP-dependent protease La 1 identified by match to protein family HMM PF00004%3B match to protein family HMM PF02190%3B match to protein family HMM PF05362%3B match to protein family HMM PF07728%3B match to protein family HMM TIGR00763 gene gene4605 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0646 BCG9842_B0647 BCG9842_B0647 BCG9842_B0647 4414448 4415044 - GTP-binding protein identified by match to protein family HMM PF01926%3B match to protein family HMM PF08477%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR03598 gene gene4604 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0647 BCG9842_B0648 BCG9842_B0648 BCG9842_B0648 4413997 4414413 + organic hydroperoxide resistance protein identified by match to protein family HMM PF02566%3B match to protein family HMM TIGR03561 gene gene4603 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0648 BCG9842_B0649 BCG9842_B0649 BCG9842_B0649 4413542 4413994 + transcriptional regulator%2C MarR family identified by match to protein family HMM PF01047 gene gene4602 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0649 BCG9842_B0650 BCG9842_B0650 hemA hemA 4411791 4413125 - glutamyl-tRNA reductase identified by match to protein family HMM PF00745%3B match to protein family HMM PF01488%3B match to protein family HMM PF05201%3B match to protein family HMM TIGR01035 gene gene4601 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0650 BCG9842_B0651 BCG9842_B0651 BCG9842_B0651 4410940 4411773 - hemX protein identified by match to protein family HMM PF01578 gene gene4600 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0651 BCG9842_B0652 BCG9842_B0652 hemC hemC 4409995 4410924 - porphobilinogen deaminase identified by match to protein family HMM PF01379%3B match to protein family HMM PF03900%3B match to protein family HMM TIGR00212 gene gene4599 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0652 BCG9842_B0653 BCG9842_B0653 hemD hemD 4409240 4409992 - uroporphyrinogen-III synthase identified by match to protein family HMM PF02602 gene gene4598 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0653 BCG9842_B0654 BCG9842_B0654 hemB hemB 4408230 4409219 - delta-aminolevulinic acid dehydratase identified by match to protein family HMM PF00490 gene gene4597 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0654 BCG9842_B0655 BCG9842_B0655 hemL2 hemL2 4406944 4408230 - glutamate-1-semialdehyde-2%2C1-aminomutase identified by match to protein family HMM PF00202%3B match to protein family HMM TIGR00713 gene gene4596 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0655 BCG9842_B0656 BCG9842_B0656 BCG9842_B0656 4405862 4406833 - putative stage VI sporulation protein D identified by match to protein family HMM PF01476%3B match to protein family HMM TIGR02907 gene gene4595 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0656 BCG9842_B0657 BCG9842_B0657 ysxE ysxE 4404770 4405795 - spore coat protein YsxE identified by match to protein family HMM TIGR02904 gene gene4594 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0657 BCG9842_B0658 BCG9842_B0658 valS valS 4401641 4404286 - valyl-tRNA synthetase identified by match to protein family HMM PF00133%3B match to protein family HMM PF08264%3B match to protein family HMM PF09334%3B match to protein family HMM TIGR00422 gene gene4593 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0658 BCG9842_B0659 BCG9842_B0659 folC folC 4400246 4401547 - tetrahydrofolylpolyglutamate synthase/dihydrofolate synthase identified by match to protein family HMM PF02875%3B match to protein family HMM PF08245%3B match to protein family HMM TIGR01499 gene gene4592 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0659 BCG9842_B0660 BCG9842_B0660 BCG9842_B0660 4399131 4400081 - putative stage II sporulation protein B gene gene4591 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0660 BCG9842_B0661 BCG9842_B0661 maF maF 4398323 4398898 - septum formation protein MaF identified by match to protein family HMM PF02545%3B match to protein family HMM TIGR00172 gene gene4590 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0661 BCG9842_B0662 BCG9842_B0662 radC radC 4397599 4398276 - DNA repair protein RadC identified by match to protein family HMM PF00633%3B match to protein family HMM PF04002%3B match to protein family HMM TIGR00608 gene gene4589 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0662 BCG9842_B0663 BCG9842_B0663 mreB mreB 4396422 4397441 - rod shape-determining protein MreB identified by match to protein family HMM PF02491%3B match to protein family HMM PF06723%3B match to protein family HMM TIGR00904 gene gene4588 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0663 BCG9842_B0664 BCG9842_B0664 mreC_2 mreC_2 4395529 4396380 - rod shape-determining protein MreC identified by match to protein family HMM PF04085%3B match to protein family HMM TIGR00219 gene gene4587 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0664 BCG9842_B0665 BCG9842_B0665 mreD mreD 4394969 4395514 - rod shape-determining protein MreD identified by match to protein family HMM PF04093%3B match to protein family HMM TIGR03426 gene gene4586 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0665 BCG9842_B0666 BCG9842_B0666 minC minC 4394247 4394933 - septum site-determining protein MinC identified by match to protein family HMM PF03775%3B match to protein family HMM TIGR01222 gene gene4585 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0666 BCG9842_B0667 BCG9842_B0667 minD minD 4393447 4394244 - septum site-determining protein MinD identified by match to protein family HMM PF01656%3B match to protein family HMM TIGR01968 gene gene4584 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0667 BCG9842_B0668 BCG9842_B0668 spoIVFA spoIVFA 4392567 4393313 - stage IV sporulation protein FA identified by match to protein family HMM PF01551 gene gene4583 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0668 BCG9842_B0669 BCG9842_B0669 spoIVFB spoIVFB 4391714 4392574 - stage IV sporulation protein FB identified by match to protein family HMM PF02163 gene gene4582 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0669 BCG9842_B0670 BCG9842_B0670 BCG9842_B0670 4390258 4391646 - ribonuclease%2C Rne/Rng family identified by match to protein family HMM TIGR00757 gene gene4581 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0670 BCG9842_B0672 BCG9842_B0672 rplU rplU 4389780 4390088 - ribosomal protein L21 identified by match to protein family HMM PF00829%3B match to protein family HMM TIGR00061 gene gene4580 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0672 BCG9842_B0673 BCG9842_B0673 BCG9842_B0673 4389424 4389768 - conserved hypothetical protein identified by match to protein family HMM PF04327 gene gene4579 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0673 BCG9842_B0674 BCG9842_B0674 rpmA rpmA 4389130 4389420 - ribosomal protein L27 identified by match to protein family HMM PF01016%3B match to protein family HMM TIGR00062 gene gene4578 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0674 BCG9842_B0675 BCG9842_B0675 BCG9842_B0675 4388524 4389066 - putative sporulation initiation phosphotransferase gene gene4577 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0675 BCG9842_B0676 BCG9842_B0676 obG obG 4387233 4388519 - spo0B-associated GTP-binding protein identified by match to protein family HMM PF01018%3B match to protein family HMM PF01926%3B match to protein family HMM PF09269%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR02729%3B match to protein family HMM TIGR03595 gene gene4576 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0676 BCG9842_B0677 BCG9842_B0677 BCG9842_B0677 4386337 4387095 - DNA-binding response regulator identified by match to protein family HMM PF00072%3B match to protein family HMM PF00486 gene gene4575 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0677 BCG9842_B0678 BCG9842_B0678 BCG9842_B0678 4385265 4386326 - sensor histidine kinase identified by match to protein family HMM PF00512%3B match to protein family HMM PF02518 gene gene4574 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0678 BCG9842_B0679 BCG9842_B0679 BCG9842_B0679 4384395 4385171 - ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005 gene gene4573 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0679 BCG9842_B0680 BCG9842_B0680 BCG9842_B0680 4382498 4384420 - ABC transporter permease protein identified by match to protein family HMM PF02687 gene gene4572 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0680 BCG9842_B0681 BCG9842_B0681 BCG9842_B0681 4380538 4382448 - ABC transporter%2C permease protein identified by match to protein family HMM PF02687 gene gene4571 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0681 BCG9842_B0682 BCG9842_B0682 pheA pheA 4379590 4380441 - prephenate dehydratase identified by match to protein family HMM PF00800 gene gene4570 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0682 BCG9842_B0683 BCG9842_B0683 BCG9842_B0683 4378942 4379412 + exosporium protein D gene gene4569 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0683 BCG9842_B0684 BCG9842_B0684 BCG9842_B0684 4378102 4378749 + conserved hypothetical protein identified by match to protein family HMM PF03473%3B match to protein family HMM PF03475 gene gene4568 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0684 BCG9842_B0685 BCG9842_B0685 BCG9842_B0685 4377480 4378022 + conserved hypothetical protein identified by match to protein family HMM PF02829%3B match to protein family HMM PF08279 gene gene4567 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0685 BCG9842_B0686 BCG9842_B0686 BCG9842_B0686 4376338 4377480 + aminotransferase%2C class V identified by match to protein family HMM PF00266%3B match to protein family HMM PF01212 gene gene4566 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0686 BCG9842_B0687 BCG9842_B0687 nadB nadB 4374656 4376185 - L-aspartate oxidase identified by match to protein family HMM PF00890%3B match to protein family HMM PF02910%3B match to protein family HMM PF07992%3B match to protein family HMM TIGR00551 gene gene4565 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0687 BCG9842_B0688 BCG9842_B0688 nadC nadC 4373803 4374636 - nicotinate-nucleotide pyrophosphorylase%2C carboxylating identified by match to protein family HMM PF01729%3B match to protein family HMM PF02749%3B match to protein family HMM TIGR00078 gene gene4564 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0688 BCG9842_B0689 BCG9842_B0689 nadA nadA 4372665 4373771 - quinolinate synthetase complex%2C subunit A identified by match to protein family HMM PF02445%3B match to protein family HMM TIGR00550 gene gene4563 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0689 BCG9842_B0690 BCG9842_B0690 BCG9842_B0690 4370543 4372438 - SpoVID-dependent spore coat assembly factor SafA identified by match to protein family HMM PF01476%3B match to protein family HMM TIGR02899 gene gene4562 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0690 BCG9842_B0691 BCG9842_B0691 BCG9842_B0691 4369717 4370364 - putative forespore-specific protein identified by match to protein family HMM PF09580 gene gene4561 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0691 BCG9842_B0692 BCG9842_B0692 BCG9842_B0692 4369303 4369683 + hypothetical protein identified by glimmer%3B putative gene gene4560 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0692 BCG9842_B0693 BCG9842_B0693 BCG9842_B0693 4368291 4368821 - putative bypass-of-forespore protein C identified by match to protein family HMM PF08955%3B match to protein family HMM PF08977 gene gene4559 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0693 BCG9842_B0694 BCG9842_B0694 BCG9842_B0694 4367335 4368279 + putative iron compound-binding protein identified by match to protein family HMM PF01497 gene gene4558 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0694 BCG9842_B0695 BCG9842_B0695 ruvA ruvA 4366529 4367146 - Holliday junction DNA helicase RuvA identified by match to protein family HMM PF01330%3B match to protein family HMM PF07499%3B match to protein family HMM TIGR00084 gene gene4557 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0695 BCG9842_B0696 BCG9842_B0696 ruvB ruvB 4365522 4366523 - Holliday junction DNA helicase RuvB identified by match to protein family HMM PF00004%3B match to protein family HMM PF01078%3B match to protein family HMM PF05491%3B match to protein family HMM PF05496%3B match to protein family HMM PF07728%3B match to protein family HMM TIGR00635 gene gene4556 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0696 BCG9842_B0697 BCG9842_B0697 BCG9842_B0697 4365325 4365525 - conserved hypothetical protein gene gene4555 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0697 BCG9842_B0698 BCG9842_B0698 queA queA 4364253 4365305 - S-adenosylmethionine:tRNA ribosyltransferase-isomerase identified by match to protein family HMM PF02547%3B match to protein family HMM TIGR00113 gene gene4554 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0698 BCG9842_B0699 BCG9842_B0699 tgt tgt 4363101 4364240 - queuine tRNA-ribosyltransferase identified by match to protein family HMM PF01702%3B match to protein family HMM TIGR00430%3B match to protein family HMM TIGR00449 gene gene4553 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0699 BCG9842_B0700 BCG9842_B0700 yajC yajC 4362813 4363073 - preprotein translocase%2C YajC subunit identified by match to protein family HMM PF02699%3B match to protein family HMM TIGR00739 gene gene4552 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0700 BCG9842_B0701 BCG9842_B0701 BCG9842_B0701 4362393 4362776 + conserved hypothetical protein gene gene4551 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0701 BCG9842_B0702 BCG9842_B0702 BCG9842_B0702 4361642 4362289 - conserved hypothetical protein identified by match to protein family HMM PF04239 gene gene4550 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0702 BCG9842_B0703 BCG9842_B0703 spoVB spoVB 4360002 4361561 + stage V sporulation protein B identified by match to protein family HMM PF01554%3B match to protein family HMM PF01943%3B match to protein family HMM PF03023%3B match to protein family HMM TIGR02900 gene gene4549 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0703 BCG9842_B0704 BCG9842_B0704 BCG9842_B0704 4359532 4359816 - conserved hypothetical protein gene gene4548 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0704 BCG9842_B0705 BCG9842_B0705 secDF secDF 4356998 4359262 - protein-export membrane protein SecDF identified by match to protein family HMM PF02355%3B match to protein family HMM PF07549%3B match to protein family HMM TIGR00916%3B match to protein family HMM TIGR00966%3B match to protein family HMM TIGR01129 gene gene4547 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0705 BCG9842_B0706 BCG9842_B0706 BCG9842_B0706 4355948 4356841 - cation efflux family protein identified by match to protein family HMM PF01545%3B match to protein family HMM TIGR01297 gene gene4546 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0706 BCG9842_B0707 BCG9842_B0707 recJ recJ 4353507 4355846 - single-stranded-DNA-specific exonuclease RecJ identified by match to protein family HMM PF01368%3B match to protein family HMM PF02272%3B match to protein family HMM TIGR00644 gene gene4545 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0707 BCG9842_B0708 BCG9842_B0708 apt1 apt1 4352947 4353459 - adenine phosphoribosyltransferase identified by match to protein family HMM PF00156%3B match to protein family HMM TIGR01090 gene gene4544 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0708 BCG9842_B0709 BCG9842_B0709 relA relA 4350553 4352736 - GTP diphosphokinase identified by match to protein family HMM PF01842%3B match to protein family HMM PF01966%3B match to protein family HMM PF02824%3B match to protein family HMM PF04607%3B match to protein family HMM TIGR00691 gene gene4543 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0709 BCG9842_B0710 BCG9842_B0710 dtD dtD 4350096 4350536 - D-tyrosyl-tRNA(Tyr) deacylase identified by match to protein family HMM PF02580%3B match to protein family HMM TIGR00256 gene gene4542 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0710 BCG9842_B0711 BCG9842_B0711 BCG9842_B0711 4349648 4349980 - conserved hypothetical protein gene gene4541 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0711 BCG9842_B0712 BCG9842_B0712 BCG9842_B0712 4349389 4349565 - conserved hypothetical protein gene gene4540 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0712 BCG9842_B0713 BCG9842_B0713 hisS2 hisS2 4347763 4349034 - histidyl-tRNA synthetase identified by match to protein family HMM PF00587%3B match to protein family HMM PF03129%3B match to protein family HMM TIGR00442 gene gene4539 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0713 BCG9842_B0714 BCG9842_B0714 aspS2 aspS2 4345975 4347750 - aspartyl-tRNA synthetase identified by match to protein family HMM PF00152%3B match to protein family HMM PF01336%3B match to protein family HMM PF02938%3B match to protein family HMM TIGR00459 gene gene4538 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0714 BCG9842_B0715 BCG9842_B0715 BCG9842_B0715 4344698 4345465 - hesA/moeB/thiF family protein identified by match to protein family HMM PF00899 gene gene4537 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0715 BCG9842_B0716 BCG9842_B0716 BCG9842_B0716 4343683 4344324 + putative prespore-specific transcriptional regulator rsfA identified by match to protein family HMM TIGR02894 gene gene4536 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0716 BCG9842_B0717 BCG9842_B0717 BCG9842_B0717 4342359 4343645 + ATPase%2C AAA family identified by match to protein family HMM PF00004 gene gene4535 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0717 BCG9842_B0718 BCG9842_B0718 BCG9842_B0718 4341649 4342065 - rrf2 family protein identified by match to protein family HMM PF02082%3B match to protein family HMM TIGR00738 gene gene4534 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0718 BCG9842_B0719 BCG9842_B0719 BCG9842_B0719 4340468 4341613 - aminotransferase%2C class V identified by match to protein family HMM PF00266 gene gene4533 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0719 BCG9842_B0720 BCG9842_B0720 trmU trmU 4339336 4340454 - tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase identified by match to protein family HMM PF03054%3B match to protein family HMM TIGR00420 gene gene4532 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0720 BCG9842_B0721 BCG9842_B0721 BCG9842_B0721 4338567 4339226 - TPR domain protein identified by match to protein family HMM PF00515%3B match to protein family HMM PF07719 gene gene4531 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0721 BCG9842_B0722 BCG9842_B0722 BCG9842_B0722 4336135 4338471 - putative helicase identified by match to protein family HMM TIGR01448 gene gene4530 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0722 BCG9842_B0723 BCG9842_B0723 BCG9842_B0723 4335819 4336007 - conserved hypothetical protein gene gene4529 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0723 BCG9842_B0724 BCG9842_B0724 BCG9842_B0724 4335672 4335800 - hypothetical protein identified by glimmer%3B putative gene gene4528 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0724 BCG9842_B0725 BCG9842_B0725 BCG9842_B0725 4335413 4335625 + hypothetical protein identified by glimmer%3B putative gene gene4527 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0725 BCG9842_B0726 BCG9842_B0726 BCG9842_B0726 4334169 4335236 - putative membrane protein identified by match to protein family HMM PF01594 gene gene4526 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0726 BCG9842_B0727 BCG9842_B0727 BCG9842_B0727 4333897 4334124 + group-specific protein gene gene4525 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0727 BCG9842_B0728 BCG9842_B0728 alaS alaS 4330636 4333278 - alanyl-tRNA synthetase identified by match to protein family HMM PF01411%3B match to protein family HMM PF02272%3B match to protein family HMM PF07973%3B match to protein family HMM TIGR00344 gene gene4524 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0728 BCG9842_B0729 BCG9842_B0729 BCG9842_B0729 4330293 4330559 - conserved hypothetical protein identified by match to protein family HMM PF06135 gene gene4523 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0729 BCG9842_B0730 BCG9842_B0730 BCG9842_B0730 4329876 4330289 - conserved hypothetical protein TIGR00250 identified by match to protein family HMM PF03652%3B match to protein family HMM TIGR00250 gene gene4522 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0730 BCG9842_B0731 BCG9842_B0731 BCG9842_B0731 4329585 4329863 - conserved hypothetical protein identified by match to protein family HMM PF06949 gene gene4521 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0731 BCG9842_B0732 BCG9842_B0732 BCG9842_B0732 4328290 4329360 - conserved hypothetical protein TIGR00247 identified by match to protein family HMM PF02618%3B match to protein family HMM TIGR00247 gene gene4520 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0732 BCG9842_B0733 BCG9842_B0733 BCG9842_B0733 4327445 4328086 - O-methyltransferase family protein identified by match to protein family HMM PF01596 gene gene4519 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0733 BCG9842_B0734 BCG9842_B0734 BCG9842_B0734 4326508 4327437 - peptidase%2C U32 family identified by match to protein family HMM PF01136 gene gene4518 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0734 BCG9842_B0735 BCG9842_B0735 BCG9842_B0735 4325209 4326489 - peptidase%2C U32 family identified by match to protein family HMM PF01136 gene gene4517 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0735 BCG9842_B0736 BCG9842_B0736 udk udk 4324553 4325191 - uridine kinase identified by match to protein family HMM PF00485%3B match to protein family HMM TIGR00235 gene gene4516 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0736 BCG9842_B0737 BCG9842_B0737 greA greA 4323798 4324325 - transcription elongation factor GreA identified by match to protein family HMM PF01272%3B match to protein family HMM PF03449%3B match to protein family HMM TIGR01462 gene gene4515 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0737 BCG9842_B0738 BCG9842_B0738 BCG9842_B0738 4322960 4323640 - conserved hypothetical protein gene gene4514 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0738 BCG9842_B0739 BCG9842_B0739 BCG9842_B0739 4321117 4322871 - penicillin-binding protein identified by match to protein family HMM PF00905 gene gene4513 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0739 BCG9842_B0740 BCG9842_B0740 BCG9842_B0740 4320338 4321000 - conserved hypothetical protein gene gene4512 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0740 BCG9842_B0741 BCG9842_B0741 BCG9842_B0741 4320087 4320302 + conserved hypothetical protein gene gene4511 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0741 BCG9842_B0742 BCG9842_B0742 BCG9842_B0742 4319312 4319950 - conserved hypothetical protein identified by match to protein family HMM PF08241%3B match to protein family HMM PF08242 gene gene4510 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0742 BCG9842_B0743 BCG9842_B0743 BCG9842_B0743 4318602 4319297 - MTA/SAH nucleosidase identified by match to protein family HMM PF01048%3B match to protein family HMM TIGR01704 gene gene4509 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0743 BCG9842_B0744 BCG9842_B0744 cysM cysM 4317596 4318519 - O-acetylserine lyase identified by match to protein family HMM PF00291 gene gene4508 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0744 BCG9842_B0745 BCG9842_B0745 BCG9842_B0745 4316459 4317592 - Cys/Met metabolism PLP-dependent enzyme identified by match to protein family HMM PF01053%3B match to protein family HMM PF01212 gene gene4507 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0745 BCG9842_B0746 BCG9842_B0746 BCG9842_B0746 4313594 4316197 - aldehyde-alcohol dehydrogenase identified by match to protein family HMM PF00465 gene gene4506 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0746 BCG9842_B0747 BCG9842_B0747 BCG9842_B0747 4313240 4313467 - conserved hypothetical protein gene gene4505 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0747 BCG9842_B0748 BCG9842_B0748 BCG9842_B0748 4312135 4313082 - iron compound ABC transporter%2C iron compound-binding protein identified by match to protein family HMM PF01497 gene gene4504 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0748 BCG9842_B0749 BCG9842_B0749 BCG9842_B0749 4311101 4312129 - iron compound ABC transporter%2C permease protein identified by match to protein family HMM PF01032 gene gene4503 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0749 BCG9842_B0750 BCG9842_B0750 BCG9842_B0750 4310296 4311114 - iron compound ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005 gene gene4502 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0750 BCG9842_B0751 BCG9842_B0751 BCG9842_B0751 4309934 4310329 - ankyrin repeat domain protein gene gene4501 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0751 BCG9842_B0752 BCG9842_B0752 BCG9842_B0752 4308968 4309474 - acetyltransferase%2C GNAT family identified by match to protein family HMM PF00583 gene gene4500 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0752 BCG9842_B0753 BCG9842_B0753 BCG9842_B0753 4308441 4308899 - acetyltransferase%2C GNAT family identified by match to protein family HMM PF00583 gene gene4499 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0753 BCG9842_B0754 BCG9842_B0754 BCG9842_B0754 4307942 4308319 - maoC family protein identified by match to protein family HMM PF01575 gene gene4498 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0754 BCG9842_B0755 BCG9842_B0755 BCG9842_B0755 4307360 4307905 + DNA-binding protein identified by match to protein family HMM PF01381%3B match to protein family HMM PF07883 gene gene4497 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0755 BCG9842_B0756 BCG9842_B0756 BCG9842_B0756 4306799 4307203 - conserved hypothetical protein identified by match to protein family HMM PF07681 gene gene4496 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0756 BCG9842_B0757 BCG9842_B0757 BCG9842_B0757 4305919 4306776 - glyoxalase family protein identified by match to protein family HMM PF00903 gene gene4495 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0757 BCG9842_B0758 BCG9842_B0758 BCG9842_B0758 4305589 4305903 + putative pterin-4-alpha-carbinolamine dehydratase identified by match to protein family HMM PF01329 gene gene4494 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0758 BCG9842_B0759 BCG9842_B0759 BCG9842_B0759 4303854 4305608 + putative phenylalanine-4-hydroxylase identified by match to protein family HMM PF00351 gene gene4493 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0759 BCG9842_B0760 BCG9842_B0760 BCG9842_B0760 4303239 4303382 + conserved hypothetical protein gene gene4492 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0760 BCG9842_B0761 BCG9842_B0761 vpR vpR 4300210 4302963 + minor extracellular protease VpR identified by match to protein family HMM PF00082%3B match to protein family HMM PF02225%3B match to protein family HMM PF05922 gene gene4491 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0761 BCG9842_B0762 BCG9842_B0762 BCG9842_B0762 4298750 4299982 - tolB domain protein gene gene4490 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0762 BCG9842_B0763 BCG9842_B0763 BCG9842_B0763 4298581 4298703 + hypothetical protein identified by glimmer%3B putative gene gene4489 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0763 BCG9842_B0764 BCG9842_B0764 BCG9842_B0764 4298173 4298511 + hypothetical protein identified by glimmer%3B putative gene gene4488 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0764 BCG9842_B0765 BCG9842_B0765 BCG9842_B0765 4297450 4298052 - phosphoglycerate mutase family identified by match to protein family HMM PF00300 gene gene4487 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0765 BCG9842_B0766 BCG9842_B0766 BCG9842_B0766 4297223 4297432 - conserved hypothetical protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift gene gene4486 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0766 BCG9842_B0767 BCG9842_B0767 BCG9842_B0767 4297089 4297205 - conserved hypothetical protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift gene gene4485 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0767 BCG9842_B0768 BCG9842_B0768 BCG9842_B0768 4296324 4296824 - conserved hypothetical protein identified by match to protein family HMM PF07681 gene gene4484 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0768 BCG9842_B0769 BCG9842_B0769 BCG9842_B0769 4295398 4296282 + hydrolase%2C alpha/beta fold family identified by match to protein family HMM PF00561 gene gene4483 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0769 BCG9842_B0770 BCG9842_B0770 BCG9842_B0770 4294549 4295382 + acetyltransferase%2C GNAT family identified by match to protein family HMM PF00583 gene gene4482 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0770 BCG9842_B0771 BCG9842_B0771 BCG9842_B0771 4292902 4294287 - alkaline phosphatase identified by match to protein family HMM PF00245 gene gene4481 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0771 BCG9842_B0772 BCG9842_B0772 BCG9842_B0772 4292380 4292847 - putative lipoprotein gene gene4480 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0772 BCG9842_B0773 BCG9842_B0773 BCG9842_B0773 4291652 4292302 + conserved hypothetical protein identified by match to protein family HMM PF04607 gene gene4479 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0773 BCG9842_B0774 BCG9842_B0774 BCG9842_B0774 4290676 4291302 - nitroreductase family protein identified by match to protein family HMM PF00881 gene gene4478 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0774 BCG9842_B0775 BCG9842_B0775 rpmG3 rpmG3 4290380 4290529 - ribosomal protein L33 identified by match to protein family HMM PF00471%3B match to protein family HMM TIGR01023 gene gene4477 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0775 BCG9842_B0776 BCG9842_B0776 BCG9842_B0776 4288798 4290291 - hypothetical Cytosolic Protein identified by match to protein family HMM PF03413 gene gene4476 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0776 BCG9842_B0777 BCG9842_B0777 BCG9842_B0777 4287855 4288748 + conserved hypothetical protein gene gene4475 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0777 BCG9842_B0778 BCG9842_B0778 sigK sigK 4286959 4287672 - RNA polymerase sigma-27 factor identified by match to protein family HMM PF04542%3B match to protein family HMM PF04545%3B match to protein family HMM PF08281%3B match to protein family HMM TIGR02846%3B match to protein family HMM TIGR02937 gene gene4474 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0778 BCG9842_B0779 BCG9842_B0779 psd psd 4285880 4286668 - phosphatidylserine decarboxylase identified by match to protein family HMM PF02666%3B match to protein family HMM TIGR00163 gene gene4473 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0779 BCG9842_B0780 BCG9842_B0780 BCG9842_B0780 4285538 4285693 + conserved domain protein identified by match to protein family HMM PF08970 gene gene4472 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0780 BCG9842_B0781 BCG9842_B0781 BCG9842_B0781 4284779 4285291 - hydrolase%2C HAD subfamily IIIA identified by match to protein family HMM PF09419%3B match to protein family HMM TIGR01662%3B match to protein family HMM TIGR01668 gene gene4471 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0781 BCG9842_B0782 BCG9842_B0782 BCG9842_B0782 4283669 4284775 - GTPase family protein identified by match to protein family HMM PF01926%3B match to protein family HMM TIGR03597 gene gene4470 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0782 BCG9842_B0783 BCG9842_B0783 aroE aroE 4282820 4283653 - shikimate 5-dehydrogenase identified by match to protein family HMM PF01488%3B match to protein family HMM PF08501%3B match to protein family HMM TIGR00507 gene gene4469 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0783 BCG9842_B0784 BCG9842_B0784 BCG9842_B0784 4282521 4282814 - conserved hypothetical protein TIGR00253 identified by match to protein family HMM PF01985%3B match to protein family HMM TIGR00253 gene gene4468 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0784 BCG9842_B0785 BCG9842_B0785 nadD nadD 4281814 4282383 - nicotinate (nicotinamide) nucleotide adenylyltransferase identified by match to protein family HMM PF01467%3B match to protein family HMM TIGR00125%3B match to protein family HMM TIGR00482 gene gene4467 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0785 BCG9842_B0786 BCG9842_B0786 BCG9842_B0786 4281255 4281824 - conserved hypothetical protein TIGR00488 identified by match to protein family HMM PF01966%3B match to protein family HMM TIGR00277%3B match to protein family HMM TIGR00488 gene gene4466 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0786 BCG9842_B0787 BCG9842_B0787 BCG9842_B0787 4280902 4281258 - iojap-related protein identified by match to protein family HMM PF02410%3B match to protein family HMM TIGR00090 gene gene4465 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0787 BCG9842_B0788 BCG9842_B0788 BCG9842_B0788 4280156 4280905 - conserved hypothetical protein identified by match to protein family HMM PF01209%3B match to protein family HMM PF08241%3B match to protein family HMM PF08242 gene gene4464 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0788 BCG9842_B0789 BCG9842_B0789 BCG9842_B0789 4279008 4279835 + putative pyrroline-5-carboxylate reductase identified by match to protein family HMM PF03807 gene gene4463 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0789 BCG9842_B0790 BCG9842_B0790 comEA comEA 4278331 4278927 - comE operon protein 1 identified by match to protein family HMM PF00633%3B match to protein family HMM TIGR00426 gene gene4462 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0790 BCG9842_B0791 BCG9842_B0791 comEB comEB 4277710 4278267 - ComE operon protein 2 identified by match to protein family HMM PF00383%3B match to protein family HMM TIGR02571 gene gene4461 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0791 BCG9842_B0792 BCG9842_B0792 comEC comEC 4275374 4277695 - DNA internalization-related competence protein ComEC/Rec2 identified by match to protein family HMM PF00753%3B match to protein family HMM PF03772%3B match to protein family HMM TIGR00360%3B match to protein family HMM TIGR00361 gene gene4460 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0792 BCG9842_B0793 BCG9842_B0793 BCG9842_B0793 4275208 4275342 + conserved hypothetical protein gene gene4459 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0793 BCG9842_B0794 BCG9842_B0794 holA_1 holA_1 4273852 4274862 - DNA polymerase III%2C delta subunit identified by match to protein family HMM PF06144%3B match to protein family HMM TIGR01128 gene gene4458 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0794 BCG9842_B0795 BCG9842_B0795 rpsT rpsT 4273509 4273766 + ribosomal protein S20 identified by match to protein family HMM PF01649%3B match to protein family HMM TIGR00029 gene gene4457 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0795 BCG9842_B0796 BCG9842_B0796 gpR gpR 4272225 4273328 - Gpr endopeptidase identified by match to protein family HMM PF03418%3B match to protein family HMM TIGR01441 gene gene4456 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0796 BCG9842_B0797 BCG9842_B0797 BCG9842_B0797 4271863 4272228 - conserved hypothetical protein gene gene4455 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0797 BCG9842_B0798 BCG9842_B0798 lepA lepA 4269829 4271652 - GTP-binding protein LepA identified by match to protein family HMM PF00009%3B match to protein family HMM PF00679%3B match to protein family HMM PF03144%3B match to protein family HMM PF06421%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR01393 gene gene4454 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0798 BCG9842_B0799 BCG9842_B0799 BCG9842_B0799 4269324 4269698 - conserved hypothetical protein identified by match to protein family HMM PF01638 gene gene4453 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0799 BCG9842_B0800 BCG9842_B0800 hemN hemN 4268133 4269272 - oxygen-independent coproporphyrinogen III oxidase identified by match to protein family HMM PF04055%3B match to protein family HMM PF06969%3B match to protein family HMM TIGR00539 gene gene4452 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0800 BCG9842_B0801 BCG9842_B0801 hrcA hrcA 4266983 4267999 - heat-inducible transcription repressor HrcA identified by match to protein family HMM PF01628%3B match to protein family HMM TIGR00331 gene gene4451 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0801 BCG9842_B0802 BCG9842_B0802 grpE grpE 4266302 4266868 - GrpE protein identified by match to protein family HMM PF01025 gene gene4450 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0802 BCG9842_B0803 BCG9842_B0803 dnaK dnaK 4264440 4266275 - chaperone protein DnaK identified by match to protein family HMM PF00012%3B match to protein family HMM TIGR02350 gene gene4449 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0803 BCG9842_B0804 BCG9842_B0804 dnaJ dnaJ 4263120 4264235 - chaperone protein dnaJ identified by match to protein family HMM PF00226%3B match to protein family HMM PF00684%3B match to protein family HMM PF01556%3B match to protein family HMM TIGR02349 gene gene4448 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0804 BCG9842_B0805 BCG9842_B0805 prmA prmA 4262153 4263091 - ribosomal protein L11 methyltransferase identified by match to protein family HMM PF01170%3B match to protein family HMM PF05175%3B match to protein family HMM PF06325%3B match to protein family HMM PF08241%3B match to protein family HMM TIGR00406 gene gene4447 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0805 BCG9842_B0806 BCG9842_B0806 BCG9842_B0806 4261259 4262008 - RNA methyltransferase%2C RsmE family identified by match to protein family HMM PF04452%3B match to protein family HMM TIGR00046 gene gene4446 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0806 BCG9842_B0807 BCG9842_B0807 BCG9842_B0807 4259900 4261252 - RNA modification enzyme%2C MiaB family identified by match to protein family HMM PF00919%3B match to protein family HMM PF01938%3B match to protein family HMM PF04055%3B match to protein family HMM TIGR00089%3B match to protein family HMM TIGR01579 gene gene4445 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0807 BCG9842_B0808 BCG9842_B0808 rpsU rpsU 4259405 4259578 - ribosomal protein S21 identified by match to protein family HMM PF01165%3B match to protein family HMM TIGR00030 gene gene4444 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0808 BCG9842_B0809 BCG9842_B0809 BCG9842_B0809 4258946 4259389 - gatB/Yqey domain protein identified by match to protein family HMM PF09424 gene gene4443 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0809 BCG9842_B0810 BCG9842_B0810 BCG9842_B0810 4258685 4258810 + hypothetical Cytosolic Protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift gene gene4442 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0810 BCG9842_B0811 BCG9842_B0811 BCG9842_B0811 4258180 4258320 + hypothetical Cytosolic Protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift gene gene4441 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0811 BCG9842_B0812 BCG9842_B0812 yqfC yqfC 4257471 4257764 - sporulation protein YqfC identified by match to protein family HMM PF07241%3B match to protein family HMM TIGR02856 gene gene4440 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0812 BCG9842_B0813 BCG9842_B0813 BCG9842_B0813 4256124 4257323 - sporulation protein identified by match to protein family HMM PF06898%3B match to protein family HMM TIGR02876 gene gene4439 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0813 BCG9842_B0814 BCG9842_B0814 BCG9842_B0814 4255161 4256120 - PhoH family protein identified by match to protein family HMM PF02562 gene gene4438 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0814 BCG9842_B0815 BCG9842_B0815 BCG9842_B0815 4252822 4254966 - metal-dependent phosphohydrolase identified by match to protein family HMM PF01966%3B match to protein family HMM PF07697%3B match to protein family HMM PF07698%3B match to protein family HMM TIGR00277 gene gene4437 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0815 BCG9842_B0816 BCG9842_B0816 BCG9842_B0816 4252355 4252825 - conserved hypothetical protein TIGR00043 identified by match to protein family HMM PF02130%3B match to protein family HMM TIGR00043 gene gene4436 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0816 BCG9842_B0817 BCG9842_B0817 dgkA dgkA 4252005 4252358 - diacylglycerol kinase identified by match to protein family HMM PF01219 gene gene4435 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0817 BCG9842_B0818 BCG9842_B0818 cdd2 cdd2 4251507 4251905 - cytidine deaminase identified by match to protein family HMM PF00383%3B match to protein family HMM TIGR01354 gene gene4434 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0818 BCG9842_B0819 BCG9842_B0819 era era 4250609 4251514 - GTP-binding protein Era identified by match to protein family HMM PF00009%3B match to protein family HMM PF01926%3B match to protein family HMM PF07650%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR00436 gene gene4433 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0819 BCG9842_B0820 BCG9842_B0820 BCG9842_B0820 4250289 4250432 - conserved hypothetical protein gene gene4432 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0820 BCG9842_B0821 BCG9842_B0821 recO recO 4249509 4250255 - recombination protein O identified by match to protein family HMM PF02565%3B match to protein family HMM TIGR00613 gene gene4431 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0821 BCG9842_B0822 BCG9842_B0822 BCG9842_B0822 4248769 4249401 - CBS domain protein identified by match to protein family HMM PF00571%3B match to protein family HMM PF08220%3B match to protein family HMM PF08279 gene gene4430 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0822 BCG9842_B0823 BCG9842_B0823 BCG9842_B0823 4247927 4248739 - conserved hypothetical protein identified by match to protein family HMM PF03618 gene gene4429 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0823 BCG9842_B0824 BCG9842_B0824 BCG9842_B0824 4247428 4247559 - conserved domain protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts gene gene4428 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0824 BCG9842_B0825 BCG9842_B0825 BCG9842_B0825 4247148 4247291 - protein of unknown function an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift gene gene4427 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0825 BCG9842_B0826 BCG9842_B0826 dnaG dnaG 4245270 4247066 - DNA primase identified by match to protein family HMM PF01751%3B match to protein family HMM PF01807%3B match to protein family HMM PF08275%3B match to protein family HMM TIGR01391 gene gene4426 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0826 BCG9842_B0827 BCG9842_B0827 sigA sigA 4244083 4245210 - RNA polymerase sigma-43 factor identified by match to protein family HMM PF00140%3B match to protein family HMM PF03979%3B match to protein family HMM PF04539%3B match to protein family HMM PF04542%3B match to protein family HMM PF04545%3B match to protein family HMM PF04967%3B match to protein family HMM TIGR02393%3B match to protein family HMM TIGR02937 gene gene4425 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0827 BCG9842_B0828 BCG9842_B0828 cccA cccA 4243340 4243696 - cytochrome c-550 identified by match to protein family HMM PF00034 gene gene4424 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0828 BCG9842_B0829 BCG9842_B0829 BCG9842_B0829 4242467 4243174 - conserved hypothetical protein identified by match to protein family HMM PF04816 gene gene4423 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0829 BCG9842_B0830 BCG9842_B0830 BCG9842_B0830 4241349 4242470 - conserved hypothetical protein TIGR00486 identified by match to protein family HMM PF01784%3B match to protein family HMM TIGR00486 gene gene4422 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0830 BCG9842_B0831 BCG9842_B0831 lytB lytB 4240358 4241308 + penicillin tolerance protein LytB identified by match to protein family HMM PF02401%3B match to protein family HMM TIGR00216 gene gene4421 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0831 BCG9842_B0832 BCG9842_B0832 BCG9842_B0832 4239537 4240268 + vrrA protein gene gene4420 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0832 BCG9842_B0833 BCG9842_B0833 BCG9842_B0833 4238045 4239355 - ATP-dependent RNA helicase%2C DEAD/DEAH box family identified by match to protein family HMM PF00270%3B match to protein family HMM PF00271 gene gene4419 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0833 BCG9842_B0834 BCG9842_B0834 nfo nfo 4236980 4237876 - deoxyribonuclease IV (phage-T(4)-induced) identified by match to protein family HMM PF01261%3B match to protein family HMM TIGR00587 gene gene4418 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0834 BCG9842_B0835 BCG9842_B0835 BCG9842_B0835 4236707 4236961 + conserved hypothetical protein gene gene4417 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0835 BCG9842_B0836 BCG9842_B0836 BCG9842_B0836 4235679 4236557 - putative membrane protein identified by match to protein family HMM PF02588 gene gene4416 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0836 BCG9842_B0837 BCG9842_B0837 BCG9842_B0837 4234729 4235499 - putative cation ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005 gene gene4415 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0837 BCG9842_B0838 BCG9842_B0838 BCG9842_B0838 4233896 4234729 - putative cation ABC transporter%2C permease protein identified by match to protein family HMM PF00950%3B match to protein family HMM PF01032 gene gene4414 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0838 BCG9842_B0839 BCG9842_B0839 BCG9842_B0839 4233469 4233855 - transcriptional regulator%2C Fur family identified by match to protein family HMM PF01475 gene gene4413 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0839 BCG9842_B0840 BCG9842_B0840 gcpE gcpE 4232277 4233389 + gcpE protein identified by match to protein family HMM PF04551%3B match to protein family HMM TIGR00612 gene gene4412 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0840 BCG9842_B0841 BCG9842_B0841 BCG9842_B0841 4231756 4232121 + conserved hypothetical protein gene gene4411 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0841 BCG9842_B0842 BCG9842_B0842 BCG9842_B0842 4230932 4231690 + YqgB identified by match to protein family HMM PF06691 gene gene4410 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0842 BCG9842_B0843 BCG9842_B0843 BCG9842_B0843 4230696 4230824 + hypothetical protein identified by glimmer%3B putative gene gene4409 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0843 BCG9842_B0844 BCG9842_B0844 BCG9842_B0844 4230612 4230690 - tRNA-Met tRNA gene4408 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0844 BCG9842_B0845 BCG9842_B0845 sodA1 sodA1 4229784 4230395 - superoxide dismutase%2C Mn identified by match to protein family HMM PF00081%3B match to protein family HMM PF02777 gene gene4407 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0845 BCG9842_B0846 BCG9842_B0846 BCG9842_B0846 4228389 4229666 - putative membrane protein identified by match to protein family HMM PF07690 gene gene4406 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0846 BCG9842_B0847 BCG9842_B0847 BCG9842_B0847 4226153 4228279 - penicillin-binding protein identified by match to protein family HMM PF00905%3B match to protein family HMM PF03717 gene gene4405 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0847 BCG9842_B0848 BCG9842_B0848 phoX phoX 4224904 4225821 - phosphate ABC transporter%2C phosphate-binding protein identified by match to protein family HMM TIGR02136 gene gene4404 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0848 BCG9842_B0849 BCG9842_B0849 pstC pstC 4223926 4224876 - phosphate ABC transporter%2C permease protein identified by match to protein family HMM PF00528%3B match to protein family HMM TIGR02138 gene gene4403 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0849 BCG9842_B0850 BCG9842_B0850 pstA pstA 4223058 4223924 - phosphate ABC transporter%2C permease protein identified by match to protein family HMM PF00528%3B match to protein family HMM TIGR00974 gene gene4402 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0850 BCG9842_B0851 BCG9842_B0851 pstB pstB 4222214 4223029 - phosphate ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005%3B match to protein family HMM TIGR00972 gene gene4401 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0851 BCG9842_B0852 BCG9842_B0852 phoU phoU 4221271 4221927 - phosphate transport system regulatory protein PhoU identified by match to protein family HMM PF01895%3B match to protein family HMM TIGR02135 gene gene4400 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0852 BCG9842_B0853 BCG9842_B0853 BCG9842_B0853 4218576 4220930 - nucleotidyl transferase family protein identified by match to protein family HMM PF00132%3B match to protein family HMM PF00483%3B match to protein family HMM PF02878 gene gene4399 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0853 BCG9842_B0854 BCG9842_B0854 rpmG2 rpmG2 4218357 4218506 - ribosomal protein L33 identified by match to protein family HMM PF00471%3B match to protein family HMM TIGR01023 gene gene4398 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0854 BCG9842_B0855 BCG9842_B0855 BCG9842_B0855 4217675 4218253 - 5-formyltetrahydrofolate cyclo-ligase identified by match to protein family HMM PF01812%3B match to protein family HMM TIGR02727 gene gene4397 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0855 BCG9842_B0856 BCG9842_B0856 BCG9842_B0856 4217371 4217571 - conserved hypothetical protein identified by match to protein family HMM PF06014 gene gene4396 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0856 BCG9842_B0857 BCG9842_B0857 glcK glcK 4216368 4217351 - glucokinase identified by match to protein family HMM PF00480%3B match to protein family HMM TIGR00744 gene gene4395 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0857 BCG9842_B0858 BCG9842_B0858 BCG9842_B0858 4216114 4216287 + conserved hypothetical protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts gene gene4394 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0858 BCG9842_B0859 BCG9842_B0859 BCG9842_B0859 4215315 4215944 - metallo-beta-lactamase family protein identified by match to protein family HMM PF00753 gene gene4393 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0859 BCG9842_B0860 BCG9842_B0860 BCG9842_B0860 4214193 4215305 - conserved hypothetical protein identified by match to protein family HMM PF02636 gene gene4392 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0860 BCG9842_B0861 BCG9842_B0861 BCG9842_B0861 4213759 4214049 + transcriptional regulator%2C ArsR family identified by match to protein family HMM PF01022 gene gene4391 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0861 BCG9842_B0862 BCG9842_B0862 BCG9842_B0862 4212813 4213325 + isochorismatase family protein identified by match to protein family HMM PF00857 gene gene4390 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0862 BCG9842_B0863 BCG9842_B0863 BCG9842_B0863 4211483 4212646 + Cys/Met metabolism PLP-dependent enzyme identified by match to protein family HMM PF01053 gene gene4389 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0863 BCG9842_B0864 BCG9842_B0864 metI metI 4210374 4211486 + cystathionine gamma-synthase/O-acetylhomoserine thiolyase identified by match to protein family HMM PF01041%3B match to protein family HMM PF01053 gene gene4388 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0864 BCG9842_B0867 BCG9842_B0867 BCG9842_B0867 4207953 4209785 - homocysteine S-methyltransferase domain protein/methylenetetrahydrofolate reductase family protein identified by match to protein family HMM PF02219%3B match to protein family HMM PF02574 gene gene4387 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0867 BCG9842_B0868 BCG9842_B0868 metH metH 4204555 4207953 - methionine synthase identified by match to protein family HMM PF00809%3B match to protein family HMM PF02310%3B match to protein family HMM PF02574%3B match to protein family HMM PF02607%3B match to protein family HMM PF02965%3B match to protein family HMM TIGR02082 gene gene4386 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0868 BCG9842_B0869 BCG9842_B0869 murG2 murG2 4203478 4204536 - undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase identified by match to protein family HMM PF03033%3B match to protein family HMM PF04101%3B match to protein family HMM TIGR01133 gene gene4385 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0869 BCG9842_B0870 BCG9842_B0870 BCG9842_B0870 4203023 4203244 - group-specific protein gene gene4384 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0870 BCG9842_B0871 BCG9842_B0871 BCG9842_B0871 4202553 4202927 - hypothetical protein identified by glimmer%3B putative gene gene4383 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0871 BCG9842_B0872 BCG9842_B0872 BCG9842_B0872 4201986 4202474 - hypothetical protein identified by glimmer%3B putative gene gene4382 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0872 BCG9842_B0873 BCG9842_B0873 BCG9842_B0873 4201640 4201951 + conserved domain protein gene gene4381 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0873 BCG9842_B0874 BCG9842_B0874 BCG9842_B0874 4201171 4201386 - hypothetical protein identified by glimmer%3B putative gene gene4380 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0874 BCG9842_B0875 BCG9842_B0875 BCG9842_B0875 4200691 4201083 - conserved hypothetical protein gene gene4379 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0875 BCG9842_B0876 BCG9842_B0876 BCG9842_B0876 4199217 4200611 + sodium:dicarboxylate symporter family protein identified by match to protein family HMM PF00375 gene gene4378 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0876 BCG9842_B0877 BCG9842_B0877 BCG9842_B0877 4198867 4199109 + conserved hypothetical protein gene gene4377 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0877 BCG9842_B0878 BCG9842_B0878 BCG9842_B0878 4198045 4198740 + conserved hypothetical protein gene gene4376 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0878 BCG9842_B0879 BCG9842_B0879 BCG9842_B0879 4197708 4197839 - ComG operon protein 1 gene gene4375 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0879 BCG9842_B0880 BCG9842_B0880 BCG9842_B0880 4197154 4197642 - conserved hypothetical protein gene gene4374 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0880 BCG9842_B0881 BCG9842_B0881 BCG9842_B0881 4196700 4197101 - transposase identified by match to protein family HMM PF01797 gene gene4373 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0881 BCG9842_B0882 BCG9842_B0882 BCG9842_B0882 4195615 4196694 - transposase identified by match to protein family HMM PF07282%3B match to protein family HMM TIGR01766 gene gene4372 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0882 BCG9842_B0883 BCG9842_B0883 BCG9842_B0883 4194380 4194589 + hypothetical protein identified by glimmer%3B putative gene gene4371 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0883 BCG9842_B0884 BCG9842_B0884 BCG9842_B0884 4194089 4194283 - hypothetical protein identified by glimmer%3B putative gene gene4370 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0884 BCG9842_B0885 BCG9842_B0885 BCG9842_B0885 4193922 4194134 - hypothetical protein identified by glimmer%3B putative gene gene4369 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0885 BCG9842_B0886 BCG9842_B0886 BCG9842_B0886 4192300 4193658 - conserved hypothetical protein gene gene4368 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0886 BCG9842_B0887 BCG9842_B0887 BCG9842_B0887 4191843 4192253 - hypothetical protein identified by glimmer%3B putative gene gene4367 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0887 BCG9842_B0888 BCG9842_B0888 BCG9842_B0888 4191145 4191726 - conserved hypothetical protein gene gene4366 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0888 BCG9842_B0889 BCG9842_B0889 BCG9842_B0889 4190979 4191119 - hypothetical protein identified by glimmer%3B putative gene gene4365 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0889 BCG9842_B0890 BCG9842_B0890 BCG9842_B0890 4190158 4190748 - hypothetical protein identified by glimmer%3B putative gene gene4364 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0890 BCG9842_B0891 BCG9842_B0891 BCG9842_B0891 4189839 4189955 - ComG operon protein 7 an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift gene gene4363 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0891 BCG9842_B0892 BCG9842_B0892 BCG9842_B0892 4189014 4189664 - prolyl 4-hydroxylase%2C alpha subunit domain protein identified by match to protein family HMM PF03171 gene gene4362 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0892 BCG9842_B0893 BCG9842_B0893 aroK aroK 4188401 4188898 - shikimate kinase identified by match to protein family HMM PF01202 gene gene4361 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0893 BCG9842_B0894 BCG9842_B0894 BCG9842_B0894 4188162 4188362 - conserved hypothetical protein gene gene4360 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0894 BCG9842_B0895 BCG9842_B0895 BCG9842_B0895 4187464 4188096 + putative membrane protein gene gene4359 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0895 BCG9842_B0896 BCG9842_B0896 BCG9842_B0896 4187206 4187322 + conserved hypothetical protein gene gene4358 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0896 BCG9842_B0897 BCG9842_B0897 BCG9842_B0897 4186905 4187132 - hypothetical protein identified by glimmer%3B putative gene gene4357 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0897 BCG9842_B0898 BCG9842_B0898 BCG9842_B0898 4186676 4186807 - conserved hypothetical protein gene gene4356 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0898 BCG9842_B0899 BCG9842_B0899 BCG9842_B0899 4185823 4186626 + conserved hypothetical protein gene gene4355 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0899 BCG9842_B0900 BCG9842_B0900 BCG9842_B0900 4184154 4185836 + putative helicase identified by match to protein family HMM PF00176%3B match to protein family HMM PF00271%3B match to protein family HMM PF04851 gene gene4354 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0900 BCG9842_B0901 BCG9842_B0901 gcvT gcvT 4182663 4183763 - glycine cleavage system T protein identified by match to protein family HMM PF01571%3B match to protein family HMM PF08669%3B match to protein family HMM TIGR00528 gene gene4353 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0901 BCG9842_B0902 BCG9842_B0902 yqhJ yqhJ 4181299 4182642 - glycine cleavage system P-protein%2C subunit 1 identified by match to protein family HMM PF02347 gene gene4352 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0902 BCG9842_B0903 BCG9842_B0903 yqhK yqhK 4179827 4181302 - glycine cleavage system P protein%2C subunit 2 identified by match to protein family HMM PF02347 gene gene4351 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0903 BCG9842_B0904 BCG9842_B0904 BCG9842_B0904 4179332 4179535 - conserved hypothetical protein gene gene4350 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0904 BCG9842_B0905 BCG9842_B0905 BCG9842_B0905 4179070 4179261 - conserved hypothetical protein gene gene4349 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0905 BCG9842_B0906 BCG9842_B0906 BCG9842_B0906 4178319 4178618 + hypothetical protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by glimmer%3B putative gene gene4347 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0906 BCG9842_B0907 BCG9842_B0907 BCG9842_B0907 4178592 4178780 - hypothetical protein identified by glimmer%3B putative gene gene4348 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0907 BCG9842_B0908 BCG9842_B0908 sugE2 sugE2 4177989 4178303 + sugE protein identified by match to protein family HMM PF00893 gene gene4346 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0908 BCG9842_B0909 BCG9842_B0909 sugE1 sugE1 4177655 4177987 + sugE protein identified by match to protein family HMM PF00893 gene gene4345 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0909 BCG9842_B0910 BCG9842_B0910 BCG9842_B0910 4177008 4177583 + transcriptional regulator%2C TetR family identified by match to protein family HMM PF00440 gene gene4344 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0910 BCG9842_B0911 BCG9842_B0911 BCG9842_B0911 4175928 4176905 + sugar-binding transcriptional regulator%2C LacI family identified by match to protein family HMM PF00356%3B match to protein family HMM PF00532 gene gene4343 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0911 BCG9842_B0912 BCG9842_B0912 BCG9842_B0912 4175001 4175450 - conserved hypothetical protein gene gene4342 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0912 BCG9842_B0913 BCG9842_B0913 BCG9842_B0913 4174577 4174960 + rhodanese-like domain protein identified by match to protein family HMM PF00581 gene gene4341 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0913 BCG9842_B0914 BCG9842_B0914 BCG9842_B0914 4173570 4174406 - putative lipoate-protein ligase A identified by match to protein family HMM PF03099 gene gene4340 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0914 BCG9842_B0915 BCG9842_B0915 BCG9842_B0915 4172699 4173541 + hypothetical protein identified by glimmer%3B putative gene gene4339 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0915 BCG9842_B0916 BCG9842_B0916 BCG9842_B0916 4172506 4172625 - conserved hypothetical protein gene gene4338 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0916 BCG9842_B0917 BCG9842_B0917 BCG9842_B0917 4171827 4172498 + conserved hypothetical protein gene gene4337 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0917 BCG9842_B0918 BCG9842_B0918 BCG9842_B0918 4171504 4171821 + transcriptional regulator%2C PadR family identified by match to protein family HMM PF03551 gene gene4336 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0918 BCG9842_B0919 BCG9842_B0919 splB splB 4170322 4171347 - spore photoproduct lyase identified by match to protein family HMM PF04055%3B match to protein family HMM TIGR00620 gene gene4335 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0919 BCG9842_B0920 BCG9842_B0920 BCG9842_B0920 4169749 4170177 - iron-dependent repressor family protein identified by match to protein family HMM PF01325%3B match to protein family HMM PF02742 gene gene4334 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0920 BCG9842_B0921 BCG9842_B0921 BCG9842_B0921 4168634 4169035 + conserved hypothetical protein gene gene4332 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0921 BCG9842_B0922 BCG9842_B0922 BCG9842_B0922 4169032 4169739 - hydrolase%2C haloacid dehalogenase-like family identified by match to protein family HMM PF00702%3B match to protein family HMM TIGR01509%3B match to protein family HMM TIGR01549 gene gene4333 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0922 BCG9842_B0923 BCG9842_B0923 BCG9842_B0923 4167634 4168554 + conserved hypothetical protein identified by match to protein family HMM PF07136 gene gene4331 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0923 BCG9842_B0924 BCG9842_B0924 BCG9842_B0924 4166901 4167389 - conserved hypothetical protein gene gene4330 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0924 BCG9842_B0925 BCG9842_B0925 aroQ aroQ 4166409 4166849 - 3-dehydroquinate dehydratase%2C type II identified by match to protein family HMM PF01220%3B match to protein family HMM TIGR01088 gene gene4329 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0925 BCG9842_B0926 BCG9842_B0926 pepQ1 pepQ1 4165343 4166404 - X-Pro dipeptidase identified by match to protein family HMM PF00557%3B match to protein family HMM PF01321 gene gene4328 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0926 BCG9842_B0927 BCG9842_B0927 efp efp 4164764 4165321 - translation elongation factor P identified by match to protein family HMM PF01132%3B match to protein family HMM PF08207%3B match to protein family HMM PF09285%3B match to protein family HMM TIGR00038 gene gene4327 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0927 BCG9842_B0928 BCG9842_B0928 BCG9842_B0928 4164407 4164727 + group-specific protein gene gene4326 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0928 BCG9842_B0929 BCG9842_B0929 BCG9842_B0929 4163848 4164426 + acetyltransferase%2C GNAT family gene gene4325 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0929 BCG9842_B0930 BCG9842_B0930 BCG9842_B0930 4163375 4163656 - conserved protein YqhV gene gene4324 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0930 BCG9842_B0931 BCG9842_B0931 spoIIIAA spoIIIAA 4162421 4163347 - stage III sporulation protein AA identified by match to protein family HMM TIGR02858 gene gene4323 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0931 BCG9842_B0932 BCG9842_B0932 spoIIIAB spoIIIAB 4161912 4162427 - stage III sporulation protein AB identified by match to protein family HMM PF09548%3B match to protein family HMM TIGR02833 gene gene4322 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0932 BCG9842_B0933 BCG9842_B0933 spoIIIAC spoIIIAC 4161694 4161897 - stage III sporulation protein AC identified by match to protein family HMM PF06686%3B match to protein family HMM TIGR02848 gene gene4321 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0933 BCG9842_B0934 BCG9842_B0934 spoIIIAD spoIIIAD 4161287 4161565 - stage III sporulation protein AD identified by match to protein family HMM PF09555%3B match to protein family HMM TIGR02849 gene gene4320 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0934 BCG9842_B0935 BCG9842_B0935 spoIIIAE spoIIIAE 4160104 4161276 - stage III sporulation protein AE identified by match to protein family HMM PF09546%3B match to protein family HMM TIGR02829 gene gene4319 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0935 BCG9842_B0936 BCG9842_B0936 spoIIIAF spoIIIAF 4159459 4160091 - stage III sporulation protein AF identified by match to protein family HMM PF09581%3B match to protein family HMM TIGR02896 gene gene4318 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0936 BCG9842_B0937 BCG9842_B0937 spoIIIAG spoIIIAG 4158807 4159469 - stage III sporulation protein AG identified by match to protein family HMM TIGR02830 gene gene4317 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0937 BCG9842_B0938 BCG9842_B0938 BCG9842_B0938 4158147 4158791 - stage III sporulation protein AH gene gene4316 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0938 BCG9842_B0939 BCG9842_B0939 accB accB 4156882 4157370 - acetyl-CoA carboxylase%2C biotin carboxyl carrier protein identified by match to protein family HMM PF00364%3B match to protein family HMM TIGR00531 gene gene4315 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0939 BCG9842_B0940 BCG9842_B0940 accC accC 4155513 4156865 - acetyl-CoA carboxylase%2C biotin carboxylase identified by match to protein family HMM PF00289%3B match to protein family HMM PF02222%3B match to protein family HMM PF02785%3B match to protein family HMM PF02786%3B match to protein family HMM PF08443%3B match to protein family HMM TIGR00514 gene gene4314 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0940 BCG9842_B0941 BCG9842_B0941 BCG9842_B0941 4155098 4155490 - conserved hypothetical protein identified by match to protein family HMM PF03780 gene gene4313 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0941 BCG9842_B0942 BCG9842_B0942 nusB nusB 4154359 4154751 - N utilization substance protein B identified by match to protein family HMM PF01029%3B match to protein family HMM TIGR01951 gene gene4312 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0942 BCG9842_B0943 BCG9842_B0943 folD folD 4153475 4154335 - methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase identified by match to protein family HMM PF00763%3B match to protein family HMM PF02882 gene gene4311 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0943 BCG9842_B0944 BCG9842_B0944 xseA xseA 4152090 4153448 - exodeoxyribonuclease VII%2C large subunit identified by match to protein family HMM PF01336%3B match to protein family HMM PF02601%3B match to protein family HMM TIGR00237 gene gene4310 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0944 BCG9842_B0945 BCG9842_B0945 xseB xseB 4151870 4152100 - exodeoxyribonuclease VII%2C small subunit identified by match to protein family HMM PF02609%3B match to protein family HMM TIGR01280 gene gene4309 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0945 BCG9842_B0946 BCG9842_B0946 ispA ispA 4150980 4151870 - geranyltranstransferase identified by match to protein family HMM PF00348 gene gene4308 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0946 BCG9842_B0947 BCG9842_B0947 dxs dxs 4148786 4150678 - 1-deoxyxylulose-5-phosphate synthase identified by match to protein family HMM PF02779%3B match to protein family HMM PF02780%3B match to protein family HMM TIGR00204 gene gene4307 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0947 BCG9842_B0948 BCG9842_B0948 BCG9842_B0948 4147943 4148782 - hemolysin A identified by match to protein family HMM PF01479%3B match to protein family HMM PF01728%3B match to protein family HMM TIGR00478 gene gene4306 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0948 BCG9842_B0949 BCG9842_B0949 argR_1 argR_1 4147351 4147800 - arginine repressor identified by match to protein family HMM PF01316%3B match to protein family HMM PF02863%3B match to protein family HMM TIGR01529 gene gene4305 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0949 BCG9842_B0950 BCG9842_B0950 recN recN 4145347 4147086 - DNA repair protein RecN identified by match to protein family HMM PF02463%3B match to protein family HMM TIGR00634 gene gene4304 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0950 BCG9842_B0951 BCG9842_B0951 spoIVB spoIVB 4143930 4145219 - stage IV sporulation protein B identified by match to protein family HMM PF00595%3B match to protein family HMM PF05580%3B match to protein family HMM TIGR02860 gene gene4303 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0951 BCG9842_B0952 BCG9842_B0952 spo0A spo0A 4142846 4143676 - stage 0 sporulation protein A identified by match to protein family HMM PF00072%3B match to protein family HMM PF08769%3B match to protein family HMM TIGR02875 gene gene4302 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0952 BCG9842_B0953 BCG9842_B0953 BCG9842_B0953 4142030 4142593 - conserved hypothetical protein gene gene4301 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0953 BCG9842_B0954 BCG9842_B0954 BCG9842_B0954 4141670 4141816 + conserved hypothetical protein gene gene4300 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0954 BCG9842_B0955 BCG9842_B0955 BCG9842_B0955 4140891 4141619 - glycerophosphoryl diester phosphodiesterase family protein identified by match to protein family HMM PF03009 gene gene4299 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0955 BCG9842_B0956 BCG9842_B0956 BCG9842_B0956 4140608 4140841 + conserved hypothetical protein gene gene4298 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0956 BCG9842_B0957 BCG9842_B0957 BCG9842_B0957 4138399 4140471 - sensory box sigma-54 dependent DNA-binding response regulator identified by match to protein family HMM PF00158%3B match to protein family HMM PF00989%3B match to protein family HMM PF02954%3B match to protein family HMM PF08448%3B match to protein family HMM TIGR00229 gene gene4297 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0957 BCG9842_B0958 BCG9842_B0958 yqiS yqiS 4137304 4138203 - phosphate butyryltransferase identified by match to protein family HMM PF01515%3B match to protein family HMM TIGR02706 gene gene4296 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0958 BCG9842_B0959 BCG9842_B0959 BCG9842_B0959 4136169 4137269 - leucine dehydrogenase identified by match to protein family HMM PF00208%3B match to protein family HMM PF02812 gene gene4295 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0959 BCG9842_B0960 BCG9842_B0960 buk buk 4134978 4136081 - butyrate kinase identified by match to protein family HMM PF00871%3B match to protein family HMM TIGR02707 gene gene4294 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0960 BCG9842_B0961 BCG9842_B0961 bfmbC bfmbC 4133552 4134973 - 3-methyl-2-oxobutanoate dehydrogenase complex%2C dihydrolipoamide dehydrogenase component identified by match to protein family HMM PF00070%3B match to protein family HMM PF01134%3B match to protein family HMM PF02852%3B match to protein family HMM PF07992%3B match to protein family HMM TIGR01350 gene gene4293 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0961 BCG9842_B0962 BCG9842_B0962 bfmbAa bfmbAa 4132523 4133524 - 3-methyl-2-oxobutanoate dehydrogenase%2C alpha subunit identified by match to protein family HMM PF00676 gene gene4292 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0962 BCG9842_B0963 BCG9842_B0963 bfmbAb bfmbAb 4131526 4132509 - 3-methyl-2-oxobutanoate dehydrogenase%2C beta subunit identified by match to protein family HMM PF02779%3B match to protein family HMM PF02780 gene gene4291 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0963 BCG9842_B0964 BCG9842_B0964 BCG9842_B0964 4130191 4131510 - putative branched-chain alpha-keto aciddehydrogenase complex%2C dihydrolipoyllysine-residue (2-methylpropanoyl)transferase) component identified by match to protein family HMM PF00198%3B match to protein family HMM PF00364%3B match to protein family HMM PF02817 gene gene4290 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0964 BCG9842_B0965 BCG9842_B0965 BCG9842_B0965 4128671 4129849 - cell division protein%2C FtsW/RodA/SpoVE family identified by match to protein family HMM PF01098 gene gene4289 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0965 BCG9842_B0966 BCG9842_B0966 BCG9842_B0966 4127859 4128563 - conserved hypothetical protein identified by match to protein family HMM PF04239 gene gene4288 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0966 BCG9842_B0967 BCG9842_B0967 BCG9842_B0967 4127324 4127788 - hydrolase%2C NUDIX family identified by match to protein family HMM PF00293 gene gene4287 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0967 BCG9842_B0968 BCG9842_B0968 BCG9842_B0968 4126795 4127202 - conserved hypothetical protein gene gene4286 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0968 BCG9842_B0969 BCG9842_B0969 BCG9842_B0969 4126237 4126671 - conserved hypothetical protein identified by match to protein family HMM PF06491 gene gene4285 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0969 BCG9842_B0970 BCG9842_B0970 BCG9842_B0970 4125996 4126148 - hypothetical protein identified by glimmer%3B putative gene gene4284 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0970 BCG9842_B0971 BCG9842_B0971 BCG9842_B0971 4125205 4125984 - amino acid ABC transporter%2C amino acid-binding protein identified by match to protein family HMM PF00497%3B match to protein family HMM PF04069 gene gene4283 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0971 BCG9842_B0972 BCG9842_B0972 BCG9842_B0972 4124509 4125168 - amino acid ABC transporter%2C permease protein identified by match to protein family HMM PF00528%3B match to protein family HMM TIGR01726 gene gene4282 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0972 BCG9842_B0973 BCG9842_B0973 BCG9842_B0973 4123794 4124516 - amino acid ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005 gene gene4281 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0973 BCG9842_B0974 BCG9842_B0974 BCG9842_B0974 4122725 4123693 - conserved hypothetical protein identified by match to protein family HMM PF06081 gene gene4280 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0974 BCG9842_B0975 BCG9842_B0975 BCG9842_B0975 4122148 4122708 - conserved hypothetical protein identified by match to protein family HMM PF03734 gene gene4279 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0975 BCG9842_B0976 BCG9842_B0976 BCG9842_B0976 4121842 4122081 - hypothetical protein identified by glimmer%3B putative gene gene4278 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0976 BCG9842_B0977 BCG9842_B0977 BCG9842_B0977 4120942 4121487 - putative ribosomal-protein-alanine acetyltransferase identified by match to protein family HMM PF00583 gene gene4277 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0977 BCG9842_B0978 BCG9842_B0978 BCG9842_B0978 4119696 4120814 - peptidase%2C M20/M25/M40 family identified by match to protein family HMM PF01546%3B match to protein family HMM PF07687%3B match to protein family HMM TIGR01883 gene gene4276 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0978 BCG9842_B0979 BCG9842_B0979 BCG9842_B0979 4117929 4119167 - putative DNA-damage-inducible protein P identified by match to protein family HMM PF00817 gene gene4275 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0979 BCG9842_B0980 BCG9842_B0980 BCG9842_B0980 4117273 4117887 + MgtC family protein identified by match to protein family HMM PF02308 gene gene4274 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0980 BCG9842_B0981 BCG9842_B0981 mgtA mgtA 4114407 4117112 + magnesium-translocating P-type ATPase identified by match to protein family HMM PF00122%3B match to protein family HMM PF00690%3B match to protein family HMM PF00702%3B match to protein family HMM TIGR01494%3B match to protein family HMM TIGR01524 gene gene4273 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0981 BCG9842_B0983 BCG9842_B0983 BCG9842_B0983 4113196 4113735 - conserved hypothetical protein gene gene4272 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0983 BCG9842_B0984 BCG9842_B0984 BCG9842_B0984 4112910 4113161 + hypothetical protein identified by glimmer%3B putative gene gene4271 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0984 BCG9842_B0985 BCG9842_B0985 rnz rnz 4111797 4112720 - ribonuclease Z identified by match to protein family HMM PF00753%3B match to protein family HMM TIGR02651 gene gene4270 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0985 BCG9842_B0986 BCG9842_B0986 BCG9842_B0986 4111319 4111435 - group-specific protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift gene gene4269 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0986 BCG9842_B0987 BCG9842_B0987 BCG9842_B0987 4111173 4111289 - putative regulatory protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift gene gene4268 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0987 BCG9842_B0988 BCG9842_B0988 sdaAB2 sdaAB2 4110465 4111127 - L-serine dehydratase%2C iron-sulfur-dependent%2C beta subunit identified by match to protein family HMM PF01842%3B match to protein family HMM PF03315%3B match to protein family HMM TIGR00719 gene gene4267 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0988 BCG9842_B0989 BCG9842_B0989 sdaAA2 sdaAA2 4109568 4110446 - L-serine dehydratase%2C iron-sulfur-dependent%2C alpha subunit identified by match to protein family HMM PF03313%3B match to protein family HMM TIGR00718 gene gene4266 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0989 BCG9842_B0990 BCG9842_B0990 proC3 proC3 4108682 4109521 + pyrroline-5-carboxylate reductase identified by match to protein family HMM PF01210%3B match to protein family HMM PF02558%3B match to protein family HMM PF03807%3B match to protein family HMM TIGR00112 gene gene4265 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0990 BCG9842_B0991 BCG9842_B0991 BCG9842_B0991 4107563 4108516 - conserved hypothetical protein identified by match to protein family HMM PF00753 gene gene4264 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0991 BCG9842_B0992 BCG9842_B0992 BCG9842_B0992 4106759 4107553 - oxidoreductase%2C short-chain dehydrogenase/reductase family identified by match to protein family HMM PF00106%3B match to protein family HMM PF08659 gene gene4263 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0992 BCG9842_B0993 BCG9842_B0993 BCG9842_B0993 4106541 4106729 + hypothetical protein identified by glimmer%3B putative gene gene4262 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0993 BCG9842_B0994 BCG9842_B0994 argC argC 4105279 4106316 - N-acetyl-gamma-glutamyl-phosphate reductase identified by match to protein family HMM PF01118%3B match to protein family HMM PF02774%3B match to protein family HMM TIGR01850 gene gene4261 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0994 BCG9842_B0995 BCG9842_B0995 argJ argJ 4104045 4105268 - glutamate N-acetyltransferase/amino-acid acetyltransferase identified by match to protein family HMM PF01960%3B match to protein family HMM TIGR00120 gene gene4260 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0995 BCG9842_B0996 BCG9842_B0996 argB argB 4103266 4104033 - acetylglutamate kinase identified by match to protein family HMM PF00696%3B match to protein family HMM TIGR00761 gene gene4259 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0996 BCG9842_B0997 BCG9842_B0997 argD argD 4102109 4103269 - acetylornithine transaminase identified by match to protein family HMM PF00202%3B match to protein family HMM TIGR00707 gene gene4258 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0997 BCG9842_B0998 BCG9842_B0998 argF_1 argF_1 4101146 4102096 - ornithine carbamoyltransferase identified by match to protein family HMM PF00185%3B match to protein family HMM PF02729%3B match to protein family HMM TIGR00658 gene gene4257 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0998 BCG9842_B0999 BCG9842_B0999 BCG9842_B0999 4100447 4101004 - hypothetical protein identified by glimmer%3B putative gene gene4256 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B0999 BCG9842_B1000 BCG9842_B1000 BCG9842_B1000 4100156 4100389 - conserved domain protein gene gene4255 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1000 BCG9842_B1001 BCG9842_B1001 BCG9842_B1001 4099685 4100131 + transcriptional regulator%2C MarR family identified by match to protein family HMM PF01047 gene gene4254 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1001 BCG9842_B1002 BCG9842_B1002 BCG9842_B1002 4098833 4099612 + putative lipase/acylhydrolase identified by match to protein family HMM PF00657 gene gene4253 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1002 BCG9842_B1003 BCG9842_B1003 cpdB cpdB 4096179 4098467 - 2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase identified by match to protein family HMM PF00149%3B match to protein family HMM PF00746%3B match to protein family HMM PF02872%3B match to protein family HMM TIGR01167 gene gene4252 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1003 BCG9842_B1004 BCG9842_B1004 nhaC3 nhaC3 4094757 4096130 + Na+/H+ antiporter NhaC identified by match to protein family HMM PF03553%3B match to protein family HMM PF03600%3B match to protein family HMM TIGR00931 gene gene4251 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1004 BCG9842_B1005 BCG9842_B1005 BCG9842_B1005 4094386 4094508 + hypothetical protein identified by glimmer%3B putative gene gene4250 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1005 BCG9842_B1006 BCG9842_B1006 BCG9842_B1006 4093760 4094116 - hypothetical protein identified by glimmer%3B putative gene gene4249 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1006 BCG9842_B1007 BCG9842_B1007 bioA bioA 4092249 4093637 - adenosylmethionine--8-amino-7-oxononanoate aminotransferase identified by match to protein family HMM PF00202%3B match to protein family HMM TIGR00508 gene gene4248 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1007 BCG9842_B1008 BCG9842_B1008 bioD bioD 4091521 4092249 - dethiobiotin synthase identified by match to protein family HMM TIGR00347 gene gene4247 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1008 BCG9842_B1009 BCG9842_B1009 bioF bioF 4090368 4091555 - 8-amino-7-oxononanoate synthase identified by match to protein family HMM PF00155%3B match to protein family HMM PF00202%3B match to protein family HMM PF00464%3B match to protein family HMM TIGR00858 gene gene4246 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1009 BCG9842_B1010 BCG9842_B1010 BCG9842_B1010 4089631 4090371 - putative bioH protein identified by match to protein family HMM PF00561 gene gene4245 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1010 BCG9842_B1011 BCG9842_B1011 BCG9842_B1011 4088856 4089665 - putative biotin synthesis protein BioC identified by match to protein family HMM PF05401%3B match to protein family HMM PF08241%3B match to protein family HMM PF08242%3B match to protein family HMM TIGR02072 gene gene4244 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1011 BCG9842_B1012 BCG9842_B1012 bioB bioB 4087856 4088854 - biotin synthase identified by match to protein family HMM PF04055%3B match to protein family HMM PF06968%3B match to protein family HMM TIGR00433 gene gene4243 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1012 BCG9842_B1013 BCG9842_B1013 BCG9842_B1013 4087353 4087673 - conserved domain protein gene gene4242 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1013 BCG9842_B1014 BCG9842_B1014 ribH ribH 4086869 4087330 + 6%2C7-dimethyl-8-ribityllumazine synthase identified by match to protein family HMM PF00885%3B match to protein family HMM TIGR00114 gene gene4241 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1014 BCG9842_B1015 BCG9842_B1015 ribBA ribBA 4085657 4086850 + 3%2C4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II identified by match to protein family HMM PF00925%3B match to protein family HMM PF00926%3B match to protein family HMM TIGR00505%3B match to protein family HMM TIGR00506 gene gene4240 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1015 BCG9842_B1016 BCG9842_B1016 ribE ribE 4085000 4085644 + riboflavin synthase%2C alpha subunit identified by match to protein family HMM PF00677%3B match to protein family HMM TIGR00187 gene gene4239 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1016 BCG9842_B1017 BCG9842_B1017 ribD ribD 4083906 4085018 + riboflavin biosynthesis protein RibD identified by match to protein family HMM PF00383%3B match to protein family HMM PF01872%3B match to protein family HMM TIGR00227%3B match to protein family HMM TIGR00326 gene gene4238 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1017 BCG9842_B1019 BCG9842_B1019 BCG9842_B1019 4083060 4083266 + conserved hypothetical protein identified by match to protein family HMM PF09360 gene gene4237 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1019 BCG9842_B1020 BCG9842_B1020 BCG9842_B1020 4082675 4082920 - conserved hypothetical protein gene gene4236 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1020 BCG9842_B1021 BCG9842_B1021 BCG9842_B1021 4081741 4082664 + conserved hypothetical protein gene gene4235 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1021 BCG9842_B1022 BCG9842_B1022 BCG9842_B1022 4081177 4081659 - acetyltransferase%2C GNAT family identified by match to protein family HMM PF00583 gene gene4234 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1022 BCG9842_B1023 BCG9842_B1023 BCG9842_B1023 4080214 4081077 - putative sugar-binding transcriptional regulator%2C LacI family identified by match to protein family HMM PF00356 gene gene4233 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1023 BCG9842_B1024 BCG9842_B1024 BCG9842_B1024 4078870 4080189 + putative membrane protein identified by match to protein family HMM PF03553%3B match to protein family HMM PF03600%3B match to protein family HMM PF06808 gene gene4232 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1024 BCG9842_B1025 BCG9842_B1025 BCG9842_B1025 4077740 4078738 + putative hydrolase%2C alpha/beta fold family identified by match to protein family HMM PF00561 gene gene4231 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1025 BCG9842_B1026 BCG9842_B1026 BCG9842_B1026 4077142 4077618 - DNA-binding protein%2C CopG family identified by match to protein family HMM PF01402 gene gene4230 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1026 BCG9842_B1027 BCG9842_B1027 BCG9842_B1027 4075428 4077017 + 5'-nucleotidase family protein identified by match to protein family HMM PF00149%3B match to protein family HMM PF02872 gene gene4229 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1027 BCG9842_B1028 BCG9842_B1028 BCG9842_B1028 4074964 4075227 - conserved hypothetical protein gene gene4228 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1028 BCG9842_B1029 BCG9842_B1029 BCG9842_B1029 4074373 4074897 - conserved hypothetical protein identified by match to protein family HMM PF04229 gene gene4227 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1029 BCG9842_B1030 BCG9842_B1030 BCG9842_B1030 4073417 4074244 - oxidoreductase%2C aldo/keto reductase family identified by match to protein family HMM PF00248 gene gene4226 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1030 BCG9842_B1031 BCG9842_B1031 lolS lolS 4072445 4073359 + lolS protein identified by match to protein family HMM PF00248 gene gene4225 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1031 BCG9842_B1032 BCG9842_B1032 BCG9842_B1032 4072199 4072333 + conserved hypothetical protein gene gene4224 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1032 BCG9842_B1033 BCG9842_B1033 BCG9842_B1033 4071585 4072124 - mutT/nudix family protein identified by match to protein family HMM PF00293 gene gene4223 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1033 BCG9842_B1034 BCG9842_B1034 BCG9842_B1034 4071010 4071561 + acetyltransferase%2C GNAT family identified by match to protein family HMM PF00583 gene gene4222 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1034 BCG9842_B1035 BCG9842_B1035 spoIIM spoIIM 4070237 4070884 - stage II sporulation protein M identified by match to protein family HMM PF01944%3B match to protein family HMM TIGR02831 gene gene4221 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1035 BCG9842_B1036 BCG9842_B1036 BCG9842_B1036 4069675 4070130 - transcriptional regulator%2C Fur family identified by match to protein family HMM PF01475 gene gene4220 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1036 BCG9842_B1037 BCG9842_B1037 BCG9842_B1037 4069341 4069571 - conserved hypothetical protein gene gene4219 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1037 BCG9842_B1038 BCG9842_B1038 BCG9842_B1038 4068444 4069334 - integrase/recombinase XerD identified by match to protein family HMM PF00589%3B match to protein family HMM PF02899%3B match to protein family HMM TIGR02225 gene gene4218 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1038 BCG9842_B1039 BCG9842_B1039 BCG9842_B1039 4067557 4068300 - putative lipoprotein gene gene4217 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1039 BCG9842_B1040 BCG9842_B1040 deoB deoB 4066017 4067201 - phosphopentomutase identified by match to protein family HMM PF01676%3B match to protein family HMM PF08342%3B match to protein family HMM TIGR01696 gene gene4216 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1040 BCG9842_B1041 BCG9842_B1041 BCG9842_B1041 4065183 4066004 - purine nucleoside phosphorylase identified by match to protein family HMM PF00896%3B match to protein family HMM TIGR01697%3B match to protein family HMM TIGR01700 gene gene4215 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1041 BCG9842_B1042 BCG9842_B1042 pyn2 pyn2 4063871 4065175 - pyrimidine-nucleoside phosphorylase identified by match to protein family HMM PF00591%3B match to protein family HMM PF02885%3B match to protein family HMM PF07831%3B match to protein family HMM TIGR02644 gene gene4214 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1042 BCG9842_B1043 BCG9842_B1043 corA corA 4062847 4063797 - magnesium and cobalt transport protein CorA identified by match to protein family HMM PF01544%3B match to protein family HMM TIGR00383 gene gene4213 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1043 BCG9842_B1044 BCG9842_B1044 BCG9842_B1044 4061526 4062815 + xanthine/uracil permease family protein identified by match to protein family HMM PF00860%3B match to protein family HMM PF00916 gene gene4212 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1044 BCG9842_B1045 BCG9842_B1045 BCG9842_B1045 4060720 4061391 + conserved hypothetical protein identified by match to protein family HMM PF04402 gene gene4211 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1045 BCG9842_B1046 BCG9842_B1046 BCG9842_B1046 4060141 4060560 - transcriptional regulator%2C MarR family identified by match to protein family HMM PF01047 gene gene4210 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1046 BCG9842_B1047 BCG9842_B1047 BCG9842_B1047 4059495 4059956 - conserved hypothetical protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift gene gene4209 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1047 BCG9842_B1048 BCG9842_B1048 BCG9842_B1048 4058426 4059475 + acetoin transport permease protein gene gene4208 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1048 BCG9842_B1049 BCG9842_B1049 BCG9842_B1049 4057324 4058388 + acetoin transport permease gene gene4207 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1049 BCG9842_B1050 BCG9842_B1050 BCG9842_B1050 4056247 4057311 + acetoin transport permease protein gene gene4206 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1050 BCG9842_B1051 BCG9842_B1051 BCG9842_B1051 4055376 4056257 + ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005 gene gene4205 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1051 BCG9842_B1052 BCG9842_B1052 BCG9842_B1052 4054991 4055410 + transcriptional regulator%2C GntR family identified by match to protein family HMM PF00392%3B match to protein family HMM PF02082 gene gene4204 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1052 BCG9842_B1053 BCG9842_B1053 dacF dacF 4053634 4054824 - serine-type D-Ala-D-Ala carboxypeptidase DacF identified by match to protein family HMM PF00768%3B match to protein family HMM PF07943 gene gene4203 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1053 BCG9842_B1054 BCG9842_B1054 spoIIAA spoIIAA 4053114 4053464 - anti-sigma F factor antagonist identified by match to protein family HMM PF01740%3B match to protein family HMM TIGR00377%3B match to protein family HMM TIGR02886 gene gene4202 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1054 BCG9842_B1055 BCG9842_B1055 spoIIAB spoIIAB 4052673 4053113 - anti-sigma F factor antagonist identified by match to protein family HMM PF02518%3B match to protein family HMM TIGR01925 gene gene4201 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1055 BCG9842_B1056 BCG9842_B1056 sigF sigF 4051902 4052660 - RNA polymerase sigma-F factor identified by match to protein family HMM PF04539%3B match to protein family HMM PF04542%3B match to protein family HMM PF04545%3B match to protein family HMM PF08281%3B match to protein family HMM TIGR02885%3B match to protein family HMM TIGR02937%3B match to protein family HMM TIGR02980 gene gene4200 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1056 BCG9842_B1057 BCG9842_B1057 BCG9842_B1057 4050239 4051765 - sodium-dependent symporter family protein identified by match to protein family HMM PF00209 gene gene4199 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1057 BCG9842_B1058 BCG9842_B1058 BCG9842_B1058 4050141 4050263 - hypothetical protein identified by glimmer%3B putative gene gene4198 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1058 BCG9842_B1059 BCG9842_B1059 spoVAA spoVAA 4049405 4050025 - stage V sporulation protein AA gene gene4197 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1059 BCG9842_B1060 BCG9842_B1060 spoVAB spoVAB 4048996 4049418 - stage V sporulation protein AB gene gene4196 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1060 BCG9842_B1061 BCG9842_B1061 BCG9842_B1061 4048523 4048981 - SpoVA family protein identified by match to protein family HMM PF03862%3B match to protein family HMM TIGR02838 gene gene4195 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1061 BCG9842_B1062 BCG9842_B1062 BCG9842_B1062 4047493 4048509 - stage V sporulation protein AD family protein identified by match to protein family HMM PF07451%3B match to protein family HMM TIGR02845 gene gene4194 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1062 BCG9842_B1063 BCG9842_B1063 BCG9842_B1063 4047139 4047489 - stage V sporulation protein AE identified by match to protein family HMM PF03862%3B match to protein family HMM TIGR02839 gene gene4193 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1063 BCG9842_B1064 BCG9842_B1064 BCG9842_B1064 4046564 4047133 - stage V sporulation protein AE gene gene4192 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1064 BCG9842_B1065 BCG9842_B1065 spoVAF spoVAF 4045105 4046577 - stage V sporulation protein AF identified by match to protein family HMM PF03323 gene gene4191 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1065 BCG9842_B1066 BCG9842_B1066 BCG9842_B1066 4044204 4045007 - HAD-superfamily hydrolase%2C subfamily IIB identified by match to protein family HMM PF05116%3B match to protein family HMM PF08282%3B match to protein family HMM TIGR00099%3B match to protein family HMM TIGR01484 gene gene4190 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1066 BCG9842_B1067 BCG9842_B1067 BCG9842_B1067 4043306 4044172 + conserved hypothetical protein identified by match to protein family HMM PF06207 gene gene4189 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1067 BCG9842_B1068 BCG9842_B1068 BCG9842_B1068 4042681 4043118 - peptidyl-prolyl cis-trans isomerase%2C cyclophilin-type identified by match to protein family HMM PF00160 gene gene4188 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1068 BCG9842_B1069 BCG9842_B1069 ribT ribT 4041850 4042218 - ribT protein identified by match to protein family HMM PF00583 gene gene4187 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1069 BCG9842_B1070 BCG9842_B1070 BCG9842_B1070 4041311 4041829 + conserved hypothetical protein identified by match to protein family HMM PF03745 gene gene4186 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1070 BCG9842_B1071 BCG9842_B1071 scpA scpA 4040203 4040946 - segregation and condensation protein A identified by match to protein family HMM PF02616 gene gene4185 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1071 BCG9842_B1072 BCG9842_B1072 scpB scpB 4039472 4040044 - segregation and condensation protein B identified by match to protein family HMM PF04079%3B match to protein family HMM TIGR00281 gene gene4184 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1072 BCG9842_B1073 BCG9842_B1073 BCG9842_B1073 4038491 4039393 - metallo-beta-lactamase family protein identified by match to protein family HMM PF00753 gene gene4183 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1073 BCG9842_B1074 BCG9842_B1074 nagA nagA 4037137 4038279 - N-acetylglucosamine-6-phosphate deacetylase identified by match to protein family HMM PF01979%3B match to protein family HMM PF07969%3B match to protein family HMM TIGR00221 gene gene4182 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1074 BCG9842_B1075 BCG9842_B1075 nagB nagB 4036344 4037132 - glucosamine-6-phosphate isomerase identified by match to protein family HMM PF01182%3B match to protein family HMM TIGR00502 gene gene4181 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1075 BCG9842_B1076 BCG9842_B1076 BCG9842_B1076 4035683 4036270 - transcriptional regulator%2C GntR family identified by match to protein family HMM PF07702 gene gene4180 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1076 BCG9842_B1077 BCG9842_B1077 BCG9842_B1077 4034803 4035609 + hydrolase%2C haloacid dehalogenase-like family identified by match to protein family HMM PF05116%3B match to protein family HMM PF08282%3B match to protein family HMM TIGR00099%3B match to protein family HMM TIGR01484 gene gene4179 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1077 BCG9842_B1078 BCG9842_B1078 glcT glcT 4033789 4034637 - transcription antiterminator GlcT identified by match to protein family HMM PF00874%3B match to protein family HMM PF03123 gene gene4178 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1078 BCG9842_B1079 BCG9842_B1079 ptsG ptsG 4031386 4033449 - PTS system%2C glucose-specific IIABC component identified by match to protein family HMM PF00358%3B match to protein family HMM PF00367%3B match to protein family HMM PF02378%3B match to protein family HMM TIGR00826%3B match to protein family HMM TIGR00830%3B match to protein family HMM TIGR02002 gene gene4177 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1079 BCG9842_B1080 BCG9842_B1080 ptsH1 ptsH1 4030986 4031249 - phosphocarrier protein HPr identified by match to protein family HMM PF00381%3B match to protein family HMM TIGR01003 gene gene4176 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1080 BCG9842_B1081 BCG9842_B1081 ptsI ptsI 4029274 4030986 - phosphoenolpyruvate-protein phosphotransferase identified by match to protein family HMM PF00391%3B match to protein family HMM PF02896%3B match to protein family HMM PF05524%3B match to protein family HMM TIGR01417 gene gene4175 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1081 BCG9842_B1082 BCG9842_B1082 BCG9842_B1082 4028808 4029176 + hypothetical protein identified by glimmer%3B putative gene gene4174 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1082 BCG9842_B1083 BCG9842_B1083 BCG9842_B1083 4028411 4028611 + hypothetical protein identified by glimmer%3B putative gene gene4173 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1083 BCG9842_B1084 BCG9842_B1084 BCG9842_B1084 4027542 4028159 + nitroreductase family protein identified by match to protein family HMM PF00881 gene gene4172 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1084 BCG9842_B1085 BCG9842_B1085 BCG9842_B1085 4025922 4027214 - putative sensory box/GGDEF family protein identified by match to protein family HMM PF00990%3B match to protein family HMM TIGR00254 gene gene4171 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1085 BCG9842_B1086 BCG9842_B1086 BCG9842_B1086 4024695 4025831 - beta-lactamase identified by match to protein family HMM PF00144 gene gene4170 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1086 BCG9842_B1087 BCG9842_B1087 BCG9842_B1087 4023812 4024690 - 2-hydroxy-3-oxopropionate reductase identified by match to protein family HMM PF03446 gene gene4169 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1087 BCG9842_B1088 BCG9842_B1088 BCG9842_B1088 4023474 4023806 - hypothetical protein identified by glimmer%3B putative gene gene4168 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1088 BCG9842_B1089 BCG9842_B1089 BCG9842_B1089 4023147 4023422 + hypothetical protein identified by glimmer%3B putative gene gene4167 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1089 BCG9842_B1090 BCG9842_B1090 BCG9842_B1090 4022346 4022858 + putative 5-methylthio-3-oxo-1-penten-1%2C2-diol dioxygenase identified by match to protein family HMM PF03079%3B match to protein family HMM PF07883 gene gene4166 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1090 BCG9842_B1091 BCG9842_B1091 BCG9842_B1091 4021730 4022368 + class II aldolase/adducin domain protein identified by match to protein family HMM PF00596%3B match to protein family HMM TIGR03328 gene gene4165 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1091 BCG9842_B1092 BCG9842_B1092 mtnX mtnX 4021074 4021733 + 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase identified by match to protein family HMM TIGR01488%3B match to protein family HMM TIGR01489%3B match to protein family HMM TIGR03333 gene gene4164 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1092 BCG9842_B1093 BCG9842_B1093 mtnW mtnW 4019833 4021077 + 2%2C3-diketo-5-methylthiopentyl-1-phosphate enolase identified by match to protein family HMM PF00016%3B match to protein family HMM TIGR03332 gene gene4163 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1093 BCG9842_B1095 BCG9842_B1095 BCG9842_B1095 4018420 4019598 + aminotransferase%2C classes I and II identified by match to protein family HMM PF00155%3B match to protein family HMM PF00202 gene gene4162 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1095 BCG9842_B1096 BCG9842_B1096 BCG9842_B1096 4017542 4018321 - hydrolase%2C carbon-nitrogen family identified by match to protein family HMM PF00795 gene gene4161 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1096 BCG9842_B1098 BCG9842_B1098 BCG9842_B1098 4016057 4017238 - putative 5-methylthioribose kinase identified by match to protein family HMM TIGR01767 gene gene4160 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1098 BCG9842_B1099 BCG9842_B1099 BCG9842_B1099 4014999 4016060 - putative translation initiation factor%2C aIF-2BI family identified by match to protein family HMM PF01008%3B match to protein family HMM TIGR00512%3B match to protein family HMM TIGR00524 gene gene4159 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1099 BCG9842_B1100 BCG9842_B1100 BCG9842_B1100 4014770 4014931 - conserved hypothetical protein gene gene4158 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1100 BCG9842_B1101 BCG9842_B1101 BCG9842_B1101 4013963 4014739 + oxidoreductase%2C short-chain dehydrogenase/reductase family identified by match to protein family HMM PF00106%3B match to protein family HMM TIGR01963 gene gene4157 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1101 BCG9842_B1102 BCG9842_B1102 BCG9842_B1102 4013434 4013766 - transcriptional regulator%2C PadR family identified by match to protein family HMM PF03551 gene gene4156 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1102 BCG9842_B1103 BCG9842_B1103 BCG9842_B1103 4012667 4013434 - conserved domain protein gene gene4155 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1103 BCG9842_B1104 BCG9842_B1104 BCG9842_B1104 4011893 4012654 - NADH dehydrogenase subunit n gene gene4154 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1104 BCG9842_B1105 BCG9842_B1105 BCG9842_B1105 4011548 4011841 - hlyC domain protein gene gene4153 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1105 BCG9842_B1106 BCG9842_B1106 BCG9842_B1106 4010915 4011532 + hypothetical protein identified by glimmer%3B putative gene gene4152 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1106 BCG9842_B1107 BCG9842_B1107 BCG9842_B1107 4010447 4010740 - hypothetical protein identified by glimmer%3B putative gene gene4151 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1107 BCG9842_B1108 BCG9842_B1108 BCG9842_B1108 4009889 4010338 - mutT/nudix family protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF00293 gene gene4150 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1108 BCG9842_B1109 BCG9842_B1109 BCG9842_B1109 4008574 4009749 - acetyl-CoA acetyltransferase identified by match to protein family HMM PF00108%3B match to protein family HMM PF02803%3B match to protein family HMM TIGR01930 gene gene4149 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1109 BCG9842_B1110 BCG9842_B1110 BCG9842_B1110 4007819 4008544 + conserved hypothetical protein identified by match to protein family HMM PF02463 gene gene4148 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1110 BCG9842_B1111 BCG9842_B1111 BCG9842_B1111 4006876 4007604 - conserved hypothetical protein gene gene4147 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1111 BCG9842_B1112 BCG9842_B1112 BCG9842_B1112 4006074 4006838 - putative lipoprotein gene gene4146 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1112 BCG9842_B1113 BCG9842_B1113 BCG9842_B1113 4005596 4006027 + putative lipoprotein gene gene4145 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1113 BCG9842_B1114 BCG9842_B1114 BCG9842_B1114 4005009 4005464 - conserved hypothetical protein identified by match to protein family HMM PF06271 gene gene4144 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1114 BCG9842_B1115 BCG9842_B1115 BCG9842_B1115 4004755 4004895 - hypothetical protein identified by glimmer%3B putative gene gene4143 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1115 BCG9842_B1116 BCG9842_B1116 BCG9842_B1116 4004181 4004690 - conserved domain protein identified by match to protein family HMM PF00106 gene gene4142 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1116 BCG9842_B1117 BCG9842_B1117 BCG9842_B1117 4003016 4004116 + sugar ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005%3B match to protein family HMM PF03459%3B match to protein family HMM PF08402 gene gene4141 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1117 BCG9842_B1118 BCG9842_B1118 malL malL 4001077 4002753 - oligo-1%2C6-glucosidase identified by match to protein family HMM PF00128 gene gene4140 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1118 BCG9842_B1119 BCG9842_B1119 BCG9842_B1119 3999276 4001036 + alpha-amylase identified by match to protein family HMM PF00128%3B match to protein family HMM PF02903 gene gene4139 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1119 BCG9842_B1120 BCG9842_B1120 BCG9842_B1120 3997692 3998951 - putative maltosaccharide ABC transporter%2C maltosaccharide-binding protein identified by match to protein family HMM PF01547 gene gene4138 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1120 BCG9842_B1121 BCG9842_B1121 malC malC 3996314 3997615 - maltosaccharide ABC transporter%2C permease protein identified by match to protein family HMM PF00528 gene gene4137 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1121 BCG9842_B1122 BCG9842_B1122 malD malD 3995471 3996313 - maltosaccharide ABC transporter%2C permease protein identified by match to protein family HMM PF00528 gene gene4136 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1122 BCG9842_B1123 BCG9842_B1123 malR malR 3994170 3995201 - maltose operon transcriptional repressor identified by match to protein family HMM PF00356%3B match to protein family HMM PF00532 gene gene4135 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1123 BCG9842_B1124 BCG9842_B1124 BCG9842_B1124 3993002 3994165 + aminotransferase%2C classes I and II identified by match to protein family HMM PF00155 gene gene4134 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1124 BCG9842_B1125 BCG9842_B1125 BCG9842_B1125 3992680 3992880 + hypothetical protein identified by glimmer%3B putative gene gene4133 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1125 BCG9842_B1126 BCG9842_B1126 BCG9842_B1126 3992488 3992604 + hypothetical protein identified by glimmer%3B putative gene gene4132 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1126 BCG9842_B1127 BCG9842_B1127 kinB3 kinB3 3991095 3992369 - sporulation kinase B identified by match to protein family HMM PF00512%3B match to protein family HMM PF02518 gene gene4131 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1127 BCG9842_B1128 BCG9842_B1128 BCG9842_B1128 3990307 3991056 + conserved hypothetical protein gene gene4130 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1128 BCG9842_B1129 BCG9842_B1129 comI comI 3989644 3990078 - competence-specific nuclease gene gene4129 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1129 BCG9842_B1130 BCG9842_B1130 comJ comJ 3989218 3989607 - competence protein j gene gene4128 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1130 BCG9842_B1131 BCG9842_B1131 metE metE 3986892 3989180 + 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase identified by match to protein family HMM PF01717%3B match to protein family HMM PF08267%3B match to protein family HMM TIGR01371 gene gene4127 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1131 BCG9842_B1133 BCG9842_B1133 BCG9842_B1133 3985822 3986379 + transcriptional repressor PadR identified by match to protein family HMM PF03551 gene gene4126 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1133 BCG9842_B1134 BCG9842_B1134 BCG9842_B1134 3984039 3985580 + drug resistance transporter%2C EmrB/QacA family identified by match to protein family HMM PF07690%3B match to protein family HMM TIGR00711 gene gene4125 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1134 BCG9842_B1135 BCG9842_B1135 BCG9842_B1135 3983135 3983635 - hypothetical protein identified by glimmer%3B putative gene gene4124 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1135 BCG9842_B1136 BCG9842_B1136 BCG9842_B1136 3982869 3983102 + hypothetical protein identified by glimmer%3B putative gene gene4123 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1136 BCG9842_B1137 BCG9842_B1137 BCG9842_B1137 3982052 3982705 - conserved domain protein gene gene4122 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1137 BCG9842_B1138 BCG9842_B1138 BCG9842_B1138 3980775 3981437 - putative lipoprotein gene gene4121 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1138 BCG9842_B1139 BCG9842_B1139 BCG9842_B1139 3980285 3980743 + conserved hypothetical protein gene gene4120 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1139 BCG9842_B1140 BCG9842_B1140 BCG9842_B1140 3978569 3980143 - Ppx/GppA phosphatase family protein identified by match to protein family HMM PF02541 gene gene4119 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1140 BCG9842_B1141 BCG9842_B1141 ppk_1 ppk_1 3977636 3978460 - polyphosphate kinase an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF02503 gene gene4118 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1141 BCG9842_B1142 BCG9842_B1142 ppk_2 ppk_2 3976353 3977657 - polyphosphate kinase an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF02503 gene gene4117 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1142 BCG9842_B1143 BCG9842_B1143 BCG9842_B1143 3975956 3976192 + hypothetical protein identified by glimmer%3B putative gene gene4116 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1143 BCG9842_B1144 BCG9842_B1144 BCG9842_B1144 3975001 3975858 + Ser/Thr protein phosphatase family protein identified by match to protein family HMM PF00149 gene gene4115 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1144 BCG9842_B1145 BCG9842_B1145 BCG9842_B1145 3974005 3974775 - oxidoreductase%2C short chain dehydrogenase/reductase family identified by match to protein family HMM PF00106 gene gene4114 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1145 BCG9842_B1146 BCG9842_B1146 BCG9842_B1146 3972532 3973749 - EAL-domain protein identified by match to protein family HMM PF00563 gene gene4113 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1146 BCG9842_B1147 BCG9842_B1147 BCG9842_B1147 3972365 3972532 - conserved hypothetical protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a premature stop gene gene4112 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1147 BCG9842_B1148 BCG9842_B1148 BCG9842_B1148 3971861 3972349 - hypothetical protein identified by glimmer%3B putative gene gene4111 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1148 BCG9842_B1149 BCG9842_B1149 BCG9842_B1149 3971500 3971736 + glutaredoxin family protein identified by match to protein family HMM PF00462%3B match to protein family HMM TIGR02196 gene gene4110 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1149 BCG9842_B1150 BCG9842_B1150 BCG9842_B1150 3971030 3971266 - conserved hypothetical protein identified by match to protein family HMM PF08796 gene gene4109 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1150 BCG9842_B1151 BCG9842_B1151 BCG9842_B1151 3970639 3970788 - hypothetical protein identified by glimmer%3B putative gene gene4108 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1151 BCG9842_B1152 BCG9842_B1152 BCG9842_B1152 3970046 3970564 - conserved hypothetical protein identified by match to protein family HMM PF04308 gene gene4107 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1152 BCG9842_B1153 BCG9842_B1153 BCG9842_B1153 3969735 3969926 - conserved hypothetical protein gene gene4106 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1153 BCG9842_B1154 BCG9842_B1154 BCG9842_B1154 3969123 3969566 - CBS domain protein identified by match to protein family HMM PF00571 gene gene4105 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1154 BCG9842_B1155 BCG9842_B1155 BCG9842_B1155 3968086 3968970 - transcriptional regulator%2C LysR family identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466 gene gene4104 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1155 BCG9842_B1156 BCG9842_B1156 BCG9842_B1156 3967292 3968014 - putative 2%2C3%2C4%2C5-tetrahydropyridine-2-carboxylate N-succinyltransferase identified by match to protein family HMM PF00132%3B match to protein family HMM PF08503%3B match to protein family HMM TIGR03532 gene gene4103 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1156 BCG9842_B1157 BCG9842_B1157 BCG9842_B1157 3966098 3967228 - peptidase%2C M20/M25/M40 family identified by match to protein family HMM PF01546%3B match to protein family HMM PF07687%3B match to protein family HMM TIGR01891 gene gene4102 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1157 BCG9842_B1158 BCG9842_B1158 BCG9842_B1158 3964984 3965850 - cytochrome d ubiquinol oxidase%2C subunit II-related protein gene gene4101 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1158 BCG9842_B1159 BCG9842_B1159 BCG9842_B1159 3964236 3964901 - potassium uptake protein%2C TrkA family identified by match to protein family HMM PF02080%3B match to protein family HMM PF02254 gene gene4100 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1159 BCG9842_B1160 BCG9842_B1160 BCG9842_B1160 3962525 3964192 + RNA-metabolising metallo-beta-lactamase family protein identified by match to protein family HMM PF00753%3B match to protein family HMM PF07521%3B match to protein family HMM TIGR00649 gene gene4099 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1160 BCG9842_B1161 BCG9842_B1161 BCG9842_B1161 3962308 3962520 + conserved hypothetical protein identified by match to protein family HMM PF07288 gene gene4098 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1161 BCG9842_B1162 BCG9842_B1162 BCG9842_B1162 3960987 3961760 - hydrolase%2C haloacid dehalogenase-like family identified by match to protein family HMM PF00702%3B match to protein family HMM PF05116%3B match to protein family HMM PF08282%3B match to protein family HMM TIGR00099%3B match to protein family HMM TIGR01484 gene gene4097 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1162 BCG9842_B1163 BCG9842_B1163 def2 def2 3960372 3960926 + peptide deformylase identified by match to protein family HMM PF01327%3B match to protein family HMM TIGR00079 gene gene4096 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1163 BCG9842_B1164 BCG9842_B1164 BCG9842_B1164 3960057 3960203 + conserved hypothetical protein identified by match to protein family HMM PF09680%3B match to protein family HMM TIGR01732 gene gene4095 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1164 BCG9842_B1165 BCG9842_B1165 pdhA pdhA 3958427 3959542 - pyruvate dehydrogenase complex E1 component%2C alpha subunit identified by match to protein family HMM PF00676%3B match to protein family HMM TIGR03181 gene gene4094 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1165 BCG9842_B1166 BCG9842_B1166 pdhB pdhB 3957446 3958423 - pyruvate dehydrogenase complex E1 component%2C beta subunit identified by match to protein family HMM PF02779%3B match to protein family HMM PF02780 gene gene4093 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1166 BCG9842_B1167 BCG9842_B1167 pdhC pdhC 3956063 3957352 - pyruvate dehydrogenase complex E2 component%2C dihydrolipoyllysine-residue acetyltransferase identified by match to protein family HMM PF00198%3B match to protein family HMM PF00364%3B match to protein family HMM PF02817 gene gene4092 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1167 BCG9842_B1168 BCG9842_B1168 pdhD pdhD 3954645 3956057 - pyruvate dehydrogenase complex E3 component%2C dihydrolipoamide dehydrogenase identified by match to protein family HMM PF00070%3B match to protein family HMM PF02852%3B match to protein family HMM PF07992%3B match to protein family HMM TIGR01350 gene gene4091 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1168 BCG9842_B1169 BCG9842_B1169 BCG9842_B1169 3953791 3954183 + hypothetical protein identified by glimmer%3B putative gene gene4090 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1169 BCG9842_B1170 BCG9842_B1170 BCG9842_B1170 3953364 3953660 - conserved hypothetical protein gene gene4089 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1170 BCG9842_B1171 BCG9842_B1171 BCG9842_B1171 3953040 3953168 - hypothetical protein identified by glimmer%3B putative gene gene4088 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1171 BCG9842_B1172 BCG9842_B1172 BCG9842_B1172 3952852 3952980 - conserved hypothetical protein gene gene4087 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1172 BCG9842_B1173 BCG9842_B1173 BCG9842_B1173 3952679 3952807 - conserved hypothetical protein gene gene4086 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1173 BCG9842_B1174 BCG9842_B1174 BCG9842_B1174 3951812 3952642 + protein-glutamine gamma-glutamyltransferase gene gene4085 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1174 BCG9842_B1175 BCG9842_B1175 speA speA 3950126 3951736 + arginine decarboxylase identified by match to protein family HMM PF01212%3B match to protein family HMM PF01276%3B match to protein family HMM PF03711 gene gene4084 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1175 BCG9842_B1176 BCG9842_B1176 BCG9842_B1176 3949626 3949895 - conserved hypothetical protein identified by match to protein family HMM PF05256 gene gene4083 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1176 BCG9842_B1177 BCG9842_B1177 BCG9842_B1177 3948919 3949545 + conserved hypothetical protein identified by match to protein family HMM PF06335 gene gene4082 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1177 BCG9842_B1178 BCG9842_B1178 BCG9842_B1178 3948525 3948713 - conserved hypothetical protein gene gene4081 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1178 BCG9842_B1179 BCG9842_B1179 BCG9842_B1179 3947633 3948436 - inositol monophosphatase family protein identified by match to protein family HMM PF00459 gene gene4080 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1179 BCG9842_B1180 BCG9842_B1180 BCG9842_B1180 3947421 3947600 + hypothetical protein identified by glimmer%3B putative gene gene4079 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1180 BCG9842_B1181 BCG9842_B1181 typA typA 3945436 3947280 - GTP-binding protein TypA identified by match to protein family HMM PF00009%3B match to protein family HMM PF00679%3B match to protein family HMM PF03144%3B match to protein family HMM PF08477%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR01394 gene gene4078 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1181 BCG9842_B1182 BCG9842_B1182 BCG9842_B1182 3944976 3945278 - YlaH gene gene4077 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1182 BCG9842_B1183 BCG9842_B1183 BCG9842_B1183 3944684 3944959 - hypothetical protein identified by glimmer%3B putative gene gene4076 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1183 BCG9842_B1184 BCG9842_B1184 BCG9842_B1184 3944463 3944648 + conserved hypothetical protein gene gene4075 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1184 BCG9842_B1185 BCG9842_B1185 BCG9842_B1185 3943847 3944302 - conserved hypothetical protein identified by match to protein family HMM PF01243 gene gene4074 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1185 BCG9842_B1186 BCG9842_B1186 BCG9842_B1186 3942272 3943600 - PhoH family protein identified by match to protein family HMM PF02562 gene gene4073 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1186 BCG9842_B1187 BCG9842_B1187 BCG9842_B1187 3941743 3942240 + conserved hypothetical protein gene gene4072 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1187 BCG9842_B1188 BCG9842_B1188 BCG9842_B1188 3941300 3941587 - conserved hypothetical protein identified by match to protein family HMM PF07408 gene gene4071 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1188 BCG9842_B1189 BCG9842_B1189 BCG9842_B1189 3939996 3941174 - cell division protein%2CFtsW/RodA/SpoVE family identified by match to protein family HMM PF01098 gene gene4070 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1189 BCG9842_B1190 BCG9842_B1190 pyc pyc 3936216 3939662 - pyruvate carboxylase identified by match to protein family HMM PF00289%3B match to protein family HMM PF00364%3B match to protein family HMM PF00682%3B match to protein family HMM PF02222%3B match to protein family HMM PF02436%3B match to protein family HMM PF02785%3B match to protein family HMM PF02786%3B match to protein family HMM PF08443%3B match to protein family HMM TIGR01235 gene gene4069 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1190 BCG9842_B1191 BCG9842_B1191 ctaA ctaA 3935194 3936129 + cytochrome aa3 controlling protein identified by match to protein family HMM PF02628 gene gene4068 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1191 BCG9842_B1192 BCG9842_B1192 BCG9842_B1192 3933773 3934696 - protoheme IX farnesyltransferase identified by match to protein family HMM PF01040%3B match to protein family HMM TIGR01473 gene gene4067 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1192 BCG9842_B1193 BCG9842_B1193 ctaC ctaC 3932630 3933679 - cytochrome c oxidase%2C subunit II identified by match to protein family HMM PF00034%3B match to protein family HMM PF00116%3B match to protein family HMM PF02790%3B match to protein family HMM TIGR02866 gene gene4066 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1193 BCG9842_B1194 BCG9842_B1194 ctaD ctaD 3930734 3932596 - cytochrome c oxidase%2C subunit I identified by match to protein family HMM PF00115%3B match to protein family HMM TIGR02891 gene gene4065 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1194 BCG9842_B1195 BCG9842_B1195 ctaE ctaE 3930111 3930734 - cytochrome c oxidase%2C subunit III identified by match to protein family HMM PF00510 gene gene4064 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1195 BCG9842_B1196 BCG9842_B1196 ctaF ctaF 3929775 3930107 - cytochrome c oxidase%2C subunit IVB identified by match to protein family HMM PF03626%3B match to protein family HMM TIGR02908 gene gene4063 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1196 BCG9842_B1197 BCG9842_B1197 BCG9842_B1197 3928790 3929749 - putative membrane protein identified by match to protein family HMM PF09678%3B match to protein family HMM TIGR02737 gene gene4062 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1197 BCG9842_B1198 BCG9842_B1198 BCG9842_B1198 3927558 3928556 - hydrolase%2C carbon-nitrogen family identified by match to protein family HMM PF00795 gene gene4061 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1198 BCG9842_B1199 BCG9842_B1199 BCG9842_B1199 3927146 3927511 + conserved hypothetical protein identified by match to protein family HMM PF08868 gene gene4060 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1199 BCG9842_B1200 BCG9842_B1200 BCG9842_B1200 3925907 3926941 - conserved hypothetical protein identified by match to protein family HMM PF00188 gene gene4059 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1200 BCG9842_B1201 BCG9842_B1201 BCG9842_B1201 3925283 3925720 - conserved hypothetical protein gene gene4058 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1201 BCG9842_B1202 BCG9842_B1202 BCG9842_B1202 3925025 3925273 - conserved hypothetical protein gene gene4057 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1202 BCG9842_B1203 BCG9842_B1203 BCG9842_B1203 3924376 3924948 - phosphoglycerate mutase identified by match to protein family HMM PF00300 gene gene4056 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1203 BCG9842_B1204 BCG9842_B1204 ylbF ylbF 3923809 3924261 - ComK regulator identified by match to protein family HMM PF07050 gene gene4055 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1204 BCG9842_B1205 BCG9842_B1205 BCG9842_B1205 3923416 3923694 - conserved hypothetical protein gene gene4054 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1205 BCG9842_B1206 BCG9842_B1206 BCG9842_B1206 3922972 3923361 + conserved hypothetical protein gene gene4053 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1206 BCG9842_B1208 BCG9842_B1208 BCG9842_B1208 3921908 3922474 - putative methyltransferase identified by match to protein family HMM PF03602%3B match to protein family HMM TIGR00095 gene gene4052 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1208 BCG9842_B1209 BCG9842_B1209 BCG9842_B1209 3920199 3921428 + putative membrane protein identified by match to protein family HMM PF07670%3B match to protein family HMM TIGR02871 gene gene4050 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1209 BCG9842_B1210 BCG9842_B1210 coaD coaD 3921420 3921911 - phosphopantetheine adenylyltransferase identified by match to protein family HMM PF01467%3B match to protein family HMM TIGR00125%3B match to protein family HMM TIGR01510 gene gene4051 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1210 BCG9842_B1211 BCG9842_B1211 BCG9842_B1211 3919294 3920085 - phospholipase%2C patatin family identified by match to protein family HMM PF01734 gene gene4049 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1211 BCG9842_B1212 BCG9842_B1212 BCG9842_B1212 3918258 3919301 - PDZ domain protein identified by match to protein family HMM PF05362 gene gene4048 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1212 BCG9842_B1213 BCG9842_B1213 BCG9842_B1213 3917873 3918178 - transposase gene gene4047 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1213 BCG9842_B1214 BCG9842_B1214 BCG9842_B1214 3917022 3917906 - integrase core domain protein identified by match to protein family HMM PF00665 gene gene4046 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1214 BCG9842_B1215 BCG9842_B1215 BCG9842_B1215 3915835 3916968 + conserved hypothetical protein identified by match to protein family HMM PF05636 gene gene4045 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1215 BCG9842_B1216 BCG9842_B1216 BCG9842_B1216 3915073 3915573 - conserved hypothetical protein identified by match to protein family HMM PF02620 gene gene4044 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1216 BCG9842_B1217 BCG9842_B1217 rpmF rpmF 3914838 3915011 - ribosomal protein L32 identified by match to protein family HMM PF01783%3B match to protein family HMM TIGR01031 gene gene4043 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1217 BCG9842_B1218 BCG9842_B1218 BCG9842_B1218 3914201 3914707 - putative DNA-binding protein identified by match to protein family HMM TIGR02894 gene gene4042 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1218 BCG9842_B1219 BCG9842_B1219 BCG9842_B1219 3913689 3914162 + acetyltransferase%2C GNAT family identified by match to protein family HMM PF00583 gene gene4041 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1219 BCG9842_B1220 BCG9842_B1220 panE2 panE2 3912508 3913398 - 2-dehydropantoate 2-reductase identified by match to protein family HMM PF02558%3B match to protein family HMM PF08546%3B match to protein family HMM TIGR00745 gene gene4040 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1220 BCG9842_B1221 BCG9842_B1221 BCG9842_B1221 3910812 3912428 - conserved hypothetical protein gene gene4039 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1221 BCG9842_B1222 BCG9842_B1222 mraW mraW 3909513 3910445 - S-adenosyl-methyltransferase MraW identified by match to protein family HMM PF01795%3B match to protein family HMM TIGR00006 gene gene4038 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1222 BCG9842_B1223 BCG9842_B1223 ftsL ftsL 3909135 3909497 - cell division protein FtsL identified by match to protein family HMM PF04977%3B match to protein family HMM TIGR02209 gene gene4037 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1223 BCG9842_B1224 BCG9842_B1224 BCG9842_B1224 3906963 3909062 - penicillin-binding protein identified by match to protein family HMM PF00905%3B match to protein family HMM PF03717%3B match to protein family HMM PF03793 gene gene4036 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1224 BCG9842_B1225 BCG9842_B1225 BCG9842_B1225 3904965 3906881 - sporulation specific penicillin-binding protein identified by match to protein family HMM PF00905%3B match to protein family HMM PF03717%3B match to protein family HMM PF03793%3B match to protein family HMM TIGR02214 gene gene4035 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1225 BCG9842_B1226 BCG9842_B1226 murE murE 3903304 3904779 - UDP-N-acetylmuramoylalanyl-D-glutamyl-2%2C6-diaminopimelate ligase identified by match to protein family HMM PF01225%3B match to protein family HMM PF02875%3B match to protein family HMM PF08245%3B match to protein family HMM TIGR01085 gene gene4034 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1226 BCG9842_B1227 BCG9842_B1227 mraY mraY 3902307 3903281 - phospho-N-acetylmuramoyl-pentapeptide-transferase identified by match to protein family HMM PF00953%3B match to protein family HMM TIGR00445 gene gene4033 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1227 BCG9842_B1228 BCG9842_B1228 murD murD 3900954 3902306 - UDP-N-acetylmuramoylalanine--D-glutamate ligase identified by match to protein family HMM PF02875%3B match to protein family HMM PF08245%3B match to protein family HMM TIGR01087 gene gene4032 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1228 BCG9842_B1229 BCG9842_B1229 spoVE spoVE 3899772 3900863 - stage V sporulation protein E identified by match to protein family HMM PF01098%3B match to protein family HMM TIGR02614%3B match to protein family HMM TIGR02615 gene gene4031 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1229 BCG9842_B1230 BCG9842_B1230 murG1 murG1 3898574 3899743 - undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase identified by match to protein family HMM PF03033%3B match to protein family HMM PF04101%3B match to protein family HMM TIGR01133 gene gene4030 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1230 BCG9842_B1231 BCG9842_B1231 murB1 murB1 3897456 3898361 - UDP-N-acetylenolpyruvoylglucosamine reductase identified by match to protein family HMM PF01565%3B match to protein family HMM PF02873%3B match to protein family HMM TIGR00179 gene gene4029 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1231 BCG9842_B1232 BCG9842_B1232 BCG9842_B1232 3896635 3897405 - cell division protein FtsQ identified by match to protein family HMM PF03799%3B match to protein family HMM PF08478 gene gene4028 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1232 BCG9842_B1233 BCG9842_B1233 ftsA ftsA 3894928 3896235 - cell division protein FtsA identified by match to protein family HMM PF02491%3B match to protein family HMM TIGR01174 gene gene4027 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1233 BCG9842_B1234 BCG9842_B1234 ftsZ ftsZ 3893734 3894888 - cell division protein FtsZ identified by match to protein family HMM PF00091%3B match to protein family HMM PF03953%3B match to protein family HMM TIGR00065 gene gene4026 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1234 BCG9842_B1235 BCG9842_B1235 spoIIGA spoIIGA 3892556 3893473 - sporulation sigma-E factor processing peptidase identified by match to protein family HMM PF03419%3B match to protein family HMM TIGR02854 gene gene4025 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1235 BCG9842_B1236 BCG9842_B1236 sigE sigE 3891817 3892536 - RNA polymerase sigma-29 factor identified by match to protein family HMM PF04542%3B match to protein family HMM PF04545%3B match to protein family HMM TIGR02835%3B match to protein family HMM TIGR02937 gene gene4024 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1236 BCG9842_B1237 BCG9842_B1237 sigG sigG 3890880 3891659 - RNA polymerase sigma-G factor identified by match to protein family HMM PF04539%3B match to protein family HMM PF04542%3B match to protein family HMM PF04545%3B match to protein family HMM TIGR02850%3B match to protein family HMM TIGR02937%3B match to protein family HMM TIGR02980 gene gene4023 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1237 BCG9842_B1238 BCG9842_B1238 BCG9842_B1238 3890435 3890716 - conserved hypothetical protein identified by match to protein family HMM PF05239%3B match to protein family HMM TIGR02888 gene gene4022 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1238 BCG9842_B1239 BCG9842_B1239 BCG9842_B1239 3889496 3890314 - conserved hypothetical protein TIGR00726 identified by match to protein family HMM PF02578%3B match to protein family HMM TIGR00726 gene gene4021 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1239 BCG9842_B1240 BCG9842_B1240 BCG9842_B1240 3888825 3889499 - conserved hypothetical protein TIGR00044 identified by match to protein family HMM PF01168%3B match to protein family HMM TIGR00044 gene gene4020 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1240 BCG9842_B1241 BCG9842_B1241 BCG9842_B1241 3888335 3888805 - ylmF protein identified by match to protein family HMM PF04472 gene gene4019 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1241 BCG9842_B1242 BCG9842_B1242 BCG9842_B1242 3888065 3888328 - ylmG protein identified by match to protein family HMM PF02325 gene gene4018 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1242 BCG9842_B1243 BCG9842_B1243 BCG9842_B1243 3887282 3888049 - S4 domain protein identified by match to protein family HMM PF01479 gene gene4017 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1243 BCG9842_B1244 BCG9842_B1244 divIVA divIVA 3886686 3887192 - cell-division initiation protein DivIVA identified by match to protein family HMM PF05103%3B match to protein family HMM TIGR03544 gene gene4016 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1244 BCG9842_B1245 BCG9842_B1245 ileS2 ileS2 3883575 3886340 - isoleucyl-tRNA synthetase identified by match to protein family HMM PF00133%3B match to protein family HMM PF06827%3B match to protein family HMM PF08264%3B match to protein family HMM PF09334%3B match to protein family HMM TIGR00392 gene gene4015 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1245 BCG9842_B1246 BCG9842_B1246 BCG9842_B1246 3883089 3883418 - conserved hypothetical protein gene gene4014 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1246 BCG9842_B1247 BCG9842_B1247 lspA lspA 3882506 3882964 - signal peptidase II identified by match to protein family HMM PF01252%3B match to protein family HMM TIGR00077 gene gene4013 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1247 BCG9842_B1248 BCG9842_B1248 BCG9842_B1248 3881593 3882501 - ribosomal large subunit pseudouridine synthase%2C RluA family identified by match to protein family HMM PF00849%3B match to protein family HMM PF01479%3B match to protein family HMM TIGR00005 gene gene4012 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1248 BCG9842_B1250 BCG9842_B1250 pyrR pyrR 3880846 3881388 - pyrimidine operon regulatory protein identified by match to protein family HMM PF00156 gene gene4011 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1250 BCG9842_B1252 BCG9842_B1252 uraA uraA 3879416 3880699 - uracil permease identified by match to protein family HMM PF00860%3B match to protein family HMM TIGR00801 gene gene4010 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1252 BCG9842_B1254 BCG9842_B1254 pyrB pyrB 3878353 3879267 - aspartate carbamoyltransferase identified by match to protein family HMM PF00185%3B match to protein family HMM PF02729%3B match to protein family HMM TIGR00670 gene gene4009 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1254 BCG9842_B1255 BCG9842_B1255 pyrC pyrC 3877083 3878369 - dihydroorotase identified by match to protein family HMM PF01979%3B match to protein family HMM PF07969%3B match to protein family HMM TIGR00857 gene gene4008 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1255 BCG9842_B1256 BCG9842_B1256 BCG9842_B1256 3875989 3877086 - carbamoyl-phosphate synthase%2C small subunit identified by match to protein family HMM PF00117%3B match to protein family HMM PF00988%3B match to protein family HMM TIGR01368 gene gene4007 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1256 BCG9842_B1257 BCG9842_B1257 carB carB 3872786 3876004 - carbamoyl-phosphate synthase%2C large subunit identified by match to protein family HMM PF00289%3B match to protein family HMM PF01071%3B match to protein family HMM PF02142%3B match to protein family HMM PF02655%3B match to protein family HMM PF02786%3B match to protein family HMM PF02787%3B match to protein family HMM PF08443%3B match to protein family HMM TIGR01369 gene gene4006 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1257 BCG9842_B1258 BCG9842_B1258 pyrK pyrK 3872010 3872789 - dihydroorotate dehydrogenase%2C electron transfer subunit identified by match to protein family HMM PF00175%3B match to protein family HMM PF00970 gene gene4005 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1258 BCG9842_B1259 BCG9842_B1259 pyrD pyrD 3871084 3872013 - dihydroorotate oxidase identified by match to protein family HMM PF01180%3B match to protein family HMM TIGR01037 gene gene4004 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1259 BCG9842_B1260 BCG9842_B1260 pyrF pyrF 3870383 3871099 - orotidine 5'-phosphate decarboxylase identified by match to protein family HMM PF00215%3B match to protein family HMM TIGR01740 gene gene4003 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1260 BCG9842_B1261 BCG9842_B1261 pyrE pyrE 3869754 3870386 - orotate phosphoribosyltransferase identified by match to protein family HMM PF00156%3B match to protein family HMM TIGR00336 gene gene4002 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1261 BCG9842_B1262 BCG9842_B1262 BCG9842_B1262 3869385 3869639 + conserved hypothetical protein gene gene4001 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1262 BCG9842_B1263 BCG9842_B1263 BCG9842_B1263 3867842 3869227 + putative membrane protein gene gene4000 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1263 BCG9842_B1264 BCG9842_B1264 BCG9842_B1264 3867690 3867803 - conserved hypothetical protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift gene gene3999 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1264 BCG9842_B1265 BCG9842_B1265 BCG9842_B1265 3867314 3867538 - conserved hypothetical protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a premature stop gene gene3998 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1265 BCG9842_B1266 BCG9842_B1266 BCG9842_B1266 3866929 3867297 - putative membrane protein gene gene3997 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1266 BCG9842_B1267 BCG9842_B1267 BCG9842_B1267 3866372 3866896 + conserved hypothetical protein gene gene3996 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1267 BCG9842_B1268 BCG9842_B1268 BCG9842_B1268 3865218 3866288 + putative X-Pro dipeptidase identified by match to protein family HMM PF00557%3B match to protein family HMM PF01321 gene gene3995 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1268 BCG9842_B1269 BCG9842_B1269 BCG9842_B1269 3863166 3864875 + putative fibronectin-binding protein identified by match to protein family HMM PF05670%3B match to protein family HMM PF05833 gene gene3994 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1269 BCG9842_B1270 BCG9842_B1270 BCG9842_B1270 3860337 3863060 - cation-transporting ATPase%2C E1-E2 family identified by match to protein family HMM PF00122%3B match to protein family HMM PF00689%3B match to protein family HMM PF00690%3B match to protein family HMM PF00702%3B match to protein family HMM TIGR01494 gene gene3993 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1270 BCG9842_B1271 BCG9842_B1271 BCG9842_B1271 3859362 3860237 - conserved hypothetical protein identified by match to protein family HMM PF03755%3B match to protein family HMM PF08340%3B match to protein family HMM TIGR00255 gene gene3992 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1271 BCG9842_B1272 BCG9842_B1272 BCG9842_B1272 3859031 3859294 - conserved hypothetical protein identified by match to protein family HMM PF04025 gene gene3991 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1272 BCG9842_B1273 BCG9842_B1273 BCG9842_B1273 3858400 3859017 - putative guanylate kinase identified by match to protein family HMM PF00625%3B match to protein family HMM TIGR03263 gene gene3990 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1273 BCG9842_B1274 BCG9842_B1274 rpoZ rpoZ 3858185 3858397 - DNA-directed RNA polymerase%2C omega subunit identified by match to protein family HMM PF01192%3B match to protein family HMM TIGR00690 gene gene3989 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1274 BCG9842_B1275 BCG9842_B1275 coaBC coaBC 3856807 3858012 - phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase identified by match to protein family HMM PF02441%3B match to protein family HMM PF04127%3B match to protein family HMM TIGR00521 gene gene3988 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1275 BCG9842_B1276 BCG9842_B1276 priA priA 3854405 3856810 - primosomal protein N` identified by match to protein family HMM PF00270%3B match to protein family HMM PF00271%3B match to protein family HMM PF04851%3B match to protein family HMM TIGR00595 gene gene3987 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1276 BCG9842_B1277 BCG9842_B1277 def1 def1 3853923 3854393 - peptide deformylase identified by match to protein family HMM PF01327%3B match to protein family HMM TIGR00079 gene gene3986 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1277 BCG9842_B1278 BCG9842_B1278 fmt fmt 3852955 3853899 - methionyl-tRNA formyltransferase identified by match to protein family HMM PF00551%3B match to protein family HMM PF02911%3B match to protein family HMM TIGR00460 gene gene3985 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1278 BCG9842_B1279 BCG9842_B1279 sun sun 3851624 3852958 - sun protein identified by match to protein family HMM PF01029%3B match to protein family HMM PF01189%3B match to protein family HMM TIGR00563 gene gene3984 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1279 BCG9842_B1280 BCG9842_B1280 BCG9842_B1280 3850531 3851619 - conserved hypothetical protein TIGR00048 identified by match to protein family HMM PF04055%3B match to protein family HMM TIGR00048 gene gene3983 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1280 BCG9842_B1281 BCG9842_B1281 BCG9842_B1281 3849774 3850526 - protein phosphatase 2C%2C family protein identified by match to protein family HMM PF00481%3B match to protein family HMM PF07228 gene gene3982 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1281 BCG9842_B1282 BCG9842_B1282 BCG9842_B1282 3847792 3849765 - serine/threonine protein kinase identified by match to protein family HMM PF00069%3B match to protein family HMM PF03793%3B match to protein family HMM PF07714 gene gene3981 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1282 BCG9842_B1283 BCG9842_B1283 BCG9842_B1283 3846663 3847544 - conserved hypothetical protein TIGR00157 identified by match to protein family HMM PF03193%3B match to protein family HMM TIGR00157 gene gene3980 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1283 BCG9842_B1284 BCG9842_B1284 rpe rpe 3846016 3846660 - ribulose-phosphate 3-epimerase identified by match to protein family HMM PF00834%3B match to protein family HMM TIGR01163 gene gene3979 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1284 BCG9842_B1285 BCG9842_B1285 BCG9842_B1285 3845266 3845925 - thiamine pyrophosphokinase identified by match to protein family HMM PF04263%3B match to protein family HMM PF04265%3B match to protein family HMM TIGR01378 gene gene3978 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1285 BCG9842_B1286 BCG9842_B1286 rpmB rpmB 3844858 3845046 + ribosomal protein L28 identified by match to protein family HMM PF00830%3B match to protein family HMM TIGR00009 gene gene3977 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1286 BCG9842_B1287 BCG9842_B1287 BCG9842_B1287 3844119 3844481 - conserved hypothetical protein identified by match to protein family HMM PF03780 gene gene3976 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1287 BCG9842_B1288 BCG9842_B1288 BCG9842_B1288 3842420 3844096 - putative phosphatase identified by match to protein family HMM PF02734%3B match to protein family HMM TIGR03599 gene gene3975 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1288 BCG9842_B1289 BCG9842_B1289 recG recG 3840081 3842129 - ATP-dependent DNA helicase RecG identified by match to protein family HMM PF00270%3B match to protein family HMM PF00271%3B match to protein family HMM PF01336%3B match to protein family HMM TIGR00643 gene gene3974 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1289 BCG9842_B1290 BCG9842_B1290 BCG9842_B1290 3839400 3840062 - conserved hypothetical protein gene gene3973 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1290 BCG9842_B1291 BCG9842_B1291 plsX plsX 3838411 3839403 - fatty acid/phospholipid synthesis protein PlsX identified by match to protein family HMM PF02504%3B match to protein family HMM TIGR00182 gene gene3972 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1291 BCG9842_B1292 BCG9842_B1292 fabD fabD 3837452 3838396 - malonyl CoA-acyl carrier protein transacylase identified by match to protein family HMM PF00698%3B match to protein family HMM TIGR00128 gene gene3971 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1292 BCG9842_B1293 BCG9842_B1293 fabG fabG 3836712 3837452 - 3-oxoacyl-(acyl-carrier-protein) reductase identified by match to protein family HMM PF00106%3B match to protein family HMM PF08659%3B match to protein family HMM TIGR01830 gene gene3970 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1293 BCG9842_B1294 BCG9842_B1294 acpP acpP 3836409 3836642 - acyl carrier protein identified by match to protein family HMM PF00550%3B match to protein family HMM TIGR00517 gene gene3969 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1294 BCG9842_B1295 BCG9842_B1295 rncS rncS 3835613 3836350 - ribonuclease III identified by match to protein family HMM PF00035%3B match to protein family HMM PF00636%3B match to protein family HMM TIGR02191 gene gene3968 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1295 BCG9842_B1296 BCG9842_B1296 smC smC 3831896 3835465 - chromosome segregation SMC protein identified by match to protein family HMM PF02463%3B match to protein family HMM PF06470%3B match to protein family HMM TIGR02168 gene gene3967 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1296 BCG9842_B1297 BCG9842_B1297 ftsY ftsY 3830891 3831880 - signal recognition particle-docking protein FtsY identified by match to protein family HMM PF00448%3B match to protein family HMM PF02881%3B match to protein family HMM TIGR00064 gene gene3966 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1297 BCG9842_B1298 BCG9842_B1298 BCG9842_B1298 3830426 3830758 - conserved hypothetical protein identified by match to protein family HMM PF04297%3B match to protein family HMM PF08281 gene gene3965 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1298 BCG9842_B1299 BCG9842_B1299 ffH ffH 3829064 3830413 - signal recognition particle protein identified by match to protein family HMM PF00448%3B match to protein family HMM PF02881%3B match to protein family HMM PF02978%3B match to protein family HMM TIGR00959 gene gene3964 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1299 BCG9842_B1300 BCG9842_B1300 rpsP rpsP 3828690 3828962 - ribosomal protein S16 identified by match to protein family HMM PF00886%3B match to protein family HMM TIGR00002 gene gene3963 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1300 BCG9842_B1301 BCG9842_B1301 BCG9842_B1301 3828448 3828675 - KH domain protein gene gene3962 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1301 BCG9842_B1302 BCG9842_B1302 rimM rimM 3827812 3828327 - 16S rRNA processing protein RimM identified by match to protein family HMM PF01782%3B match to protein family HMM PF05239%3B match to protein family HMM TIGR02273 gene gene3961 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1302 BCG9842_B1303 BCG9842_B1303 trmD trmD 3827078 3827812 - tRNA (guanine-N1)-methyltransferase identified by match to protein family HMM PF01746%3B match to protein family HMM TIGR00088 gene gene3960 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1303 BCG9842_B1305 BCG9842_B1305 rplS rplS 3826587 3826931 - ribosomal protein L19 identified by match to protein family HMM PF01245%3B match to protein family HMM TIGR01024 gene gene3959 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1305 BCG9842_B1306 BCG9842_B1306 sipS2 sipS2 3825934 3826485 - signal peptidase I S identified by match to protein family HMM PF00717%3B match to protein family HMM TIGR02227 gene gene3958 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1306 BCG9842_B1307 BCG9842_B1307 BCG9842_B1307 3825023 3825913 - GTPase family protein identified by match to protein family HMM PF01926%3B match to protein family HMM TIGR03596 gene gene3957 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1307 BCG9842_B1308 BCG9842_B1308 rnhB rnhB 3824193 3824966 - ribonuclease HII identified by match to protein family HMM PF01351 gene gene3956 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1308 BCG9842_B1309 BCG9842_B1309 sucC sucC 3822839 3823999 - succinate-CoA ligase (ADP-forming)%2C beta subunit identified by match to protein family HMM PF00549%3B match to protein family HMM PF08442%3B match to protein family HMM TIGR01016 gene gene3955 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1309 BCG9842_B1310 BCG9842_B1310 sucD sucD 3821917 3822819 - succinate-CoA ligase (ADP-forming)%2C alpha subunit identified by match to protein family HMM PF00549%3B match to protein family HMM PF02629%3B match to protein family HMM TIGR01019 gene gene3954 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1310 BCG9842_B1311 BCG9842_B1311 smF smF 3820959 3821828 - DNA processing Smf protein identified by match to protein family HMM PF02481%3B match to protein family HMM TIGR00732 gene gene3953 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1311 BCG9842_B1312 BCG9842_B1312 topA topA 3818736 3820814 - DNA topoisomerase I identified by match to protein family HMM PF01131%3B match to protein family HMM PF01396%3B match to protein family HMM PF01751%3B match to protein family HMM TIGR01051 gene gene3952 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1312 BCG9842_B1313 BCG9842_B1313 gid gid 3817383 3818687 - gid protein identified by match to protein family HMM PF01134%3B match to protein family HMM TIGR00137 gene gene3951 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1313 BCG9842_B1314 BCG9842_B1314 xerC xerC 3816418 3817317 - tyrosine recombinase XerC identified by match to protein family HMM PF00589%3B match to protein family HMM PF02899%3B match to protein family HMM TIGR02224 gene gene3950 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1314 BCG9842_B1315 BCG9842_B1315 hslV hslV 3815833 3816375 - ATP-dependent protease hslV identified by match to protein family HMM PF00227 gene gene3949 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1315 BCG9842_B1316 BCG9842_B1316 hslU hslU 3814419 3815810 - ATP-dependent hsl protease%2C ATP-binding subunit hslU identified by match to protein family HMM PF07724%3B match to protein family HMM TIGR00390 gene gene3948 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1316 BCG9842_B1317 BCG9842_B1317 codY codY 3813562 3814341 - transcriptional regulator CodY identified by match to protein family HMM PF06018%3B match to protein family HMM PF08222%3B match to protein family HMM PF08279%3B match to protein family HMM TIGR02787 gene gene3947 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1317 BCG9842_B1318 BCG9842_B1318 rpsB rpsB 3812513 3813214 - ribosomal protein S2 identified by match to protein family HMM PF00318%3B match to protein family HMM TIGR01011 gene gene3946 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1318 BCG9842_B1319 BCG9842_B1319 tsf tsf 3811522 3812409 - translation elongation factor Ts identified by match to protein family HMM PF00627%3B match to protein family HMM PF00889%3B match to protein family HMM TIGR00116 gene gene3945 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1319 BCG9842_B1320 BCG9842_B1320 pyrH2 pyrH2 3810733 3811455 - uridylate kinase identified by match to protein family HMM PF00696%3B match to protein family HMM TIGR02075 gene gene3944 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1320 BCG9842_B1321 BCG9842_B1321 frr frr 3810173 3810730 - ribosome recycling factor identified by match to protein family HMM PF01765%3B match to protein family HMM TIGR00496 gene gene3943 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1321 BCG9842_B1322 BCG9842_B1322 BCG9842_B1322 3809241 3809354 + hypothetical protein identified by glimmer%3B putative gene gene3941 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1322 BCG9842_B1323 BCG9842_B1323 uppS uppS 3809311 3810087 - di-trans%2Cpoly-cis-decaprenylcistransferase identified by match to protein family HMM PF01255%3B match to protein family HMM TIGR00055 gene gene3942 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1323 BCG9842_B1324 BCG9842_B1324 cdsA cdsA 3808502 3809269 - phosphatidate cytidylyltransferase identified by match to protein family HMM PF01148 gene gene3940 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1324 BCG9842_B1325 BCG9842_B1325 dxr2 dxr2 3807336 3808478 - 1-deoxy-D-xylulose 5-phosphate reductoisomerase identified by match to protein family HMM PF02670%3B match to protein family HMM PF08436%3B match to protein family HMM TIGR00243 gene gene3939 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1325 BCG9842_B1326 BCG9842_B1326 rasP rasP 3806062 3807318 - RIP metalloprotease RasP identified by match to protein family HMM PF00595%3B match to protein family HMM PF02163%3B match to protein family HMM TIGR00054 gene gene3938 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1326 BCG9842_B1327 BCG9842_B1327 proS2 proS2 3804252 3805952 - prolyl-tRNA synthetase identified by match to protein family HMM PF00587%3B match to protein family HMM PF03129%3B match to protein family HMM PF04073%3B match to protein family HMM TIGR00409 gene gene3937 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1327 BCG9842_B1328 BCG9842_B1328 polC polC 3799826 3804127 - DNA polymerase III%2C alpha subunit%2C Gram-positive type identified by match to protein family HMM PF00929%3B match to protein family HMM PF01336%3B match to protein family HMM PF02811%3B match to protein family HMM PF07733%3B match to protein family HMM TIGR00573%3B match to protein family HMM TIGR01405 gene gene3936 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1328 BCG9842_B1329 BCG9842_B1329 BCG9842_B1329 3799022 3799492 - conserved hypothetical protein identified by match to protein family HMM PF02576 gene gene3935 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1329 BCG9842_B1330 BCG9842_B1330 nusA nusA 3797898 3799004 - N utilization substance protein A identified by match to protein family HMM PF00575%3B match to protein family HMM PF08529%3B match to protein family HMM TIGR01953 gene gene3934 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1330 BCG9842_B1331 BCG9842_B1331 BCG9842_B1331 3797614 3797886 - conserved hypothetical protein identified by match to protein family HMM PF04296 gene gene3933 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1331 BCG9842_B1332 BCG9842_B1332 BCG9842_B1332 3797302 3797613 - ribosomal protein L7A family identified by match to protein family HMM PF01248 gene gene3932 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1332 BCG9842_B1333 BCG9842_B1333 infB infB 3795231 3797297 - translation initiation factor IF-2 identified by match to protein family HMM PF00009%3B match to protein family HMM PF01926%3B match to protein family HMM PF03144%3B match to protein family HMM PF04760%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR00487 gene gene3931 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1333 BCG9842_B1334 BCG9842_B1334 BCG9842_B1334 3794953 3795234 - conserved hypothetical protein identified by match to protein family HMM PF04456 gene gene3930 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1334 BCG9842_B1335 BCG9842_B1335 rbfA rbfA 3794581 3794937 - ribosome-binding factor A identified by match to protein family HMM PF02033%3B match to protein family HMM TIGR00082 gene gene3929 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1335 BCG9842_B1336 BCG9842_B1336 truB truB 3793571 3794494 - tRNA pseudouridine synthase B identified by match to protein family HMM PF01509%3B match to protein family HMM TIGR00431 gene gene3928 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1336 BCG9842_B1337 BCG9842_B1337 ribF ribF 3792556 3793527 - riboflavin biosynthesis protein RibF identified by match to protein family HMM PF01687%3B match to protein family HMM PF06574%3B match to protein family HMM TIGR00083 gene gene3927 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1337 BCG9842_B1338 BCG9842_B1338 rpsO rpsO 3792186 3792455 - ribosomal protein S15 identified by match to protein family HMM PF00312%3B match to protein family HMM TIGR00952 gene gene3926 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1338 BCG9842_B1339 BCG9842_B1339 pnp pnp 3789887 3792025 - polyribonucleotide nucleotidyltransferase identified by match to protein family HMM PF00013%3B match to protein family HMM PF00575%3B match to protein family HMM PF01138%3B match to protein family HMM PF03725%3B match to protein family HMM PF03726%3B match to protein family HMM TIGR03591 gene gene3925 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1339 BCG9842_B1340 BCG9842_B1340 BCG9842_B1340 3788835 3789734 - putative polysaccharide deacetylase identified by match to protein family HMM PF01522%3B match to protein family HMM TIGR02873 gene gene3924 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1340 BCG9842_B1341 BCG9842_B1341 BCG9842_B1341 3787506 3788705 - zinc protease%2C insulinase family identified by match to protein family HMM PF00675%3B match to protein family HMM PF05193 gene gene3923 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1341 BCG9842_B1342 BCG9842_B1342 BCG9842_B1342 3787119 3787370 - conserved hypothetical protein identified by match to protein family HMM PF05239%3B match to protein family HMM TIGR02888 gene gene3922 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1342 BCG9842_B1343 BCG9842_B1343 spoVFA spoVFA 3786046 3786948 - dipicolinate synthase%2C A subunit identified by match to protein family HMM PF01262%3B match to protein family HMM PF01488%3B match to protein family HMM TIGR02853 gene gene3921 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1343 BCG9842_B1344 BCG9842_B1344 dpaB dpaB 3785609 3786049 - dipicolinic acid synthetase%2C B subunit identified by match to protein family HMM PF02441%3B match to protein family HMM TIGR02852 gene gene3920 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1344 BCG9842_B1345 BCG9842_B1345 BCG9842_B1345 3784044 3785591 + recombinase identified by match to protein family HMM PF00239%3B match to protein family HMM PF07508 gene gene3919 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1345 BCG9842_B1346 BCG9842_B1346 BCG9842_B1346 3783165 3783968 + hypothetical protein identified by glimmer%3B putative gene gene3918 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1346 BCG9842_B1347 BCG9842_B1347 BCG9842_B1347 3782047 3783096 + hypothetical protein identified by glimmer%3B putative gene gene3917 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1347 BCG9842_B1348 BCG9842_B1348 BCG9842_B1348 3781576 3782004 + conserved hypothetical protein identified by match to protein family HMM PF06114 gene gene3916 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1348 BCG9842_B1349 BCG9842_B1349 BCG9842_B1349 3781129 3781563 + immunity repressor protein identified by match to protein family HMM PF01381 gene gene3915 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1349 BCG9842_B1350 BCG9842_B1350 BCG9842_B1350 3780785 3780973 - DNA-binding protein identified by match to protein family HMM PF01381 gene gene3914 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1350 BCG9842_B1351 BCG9842_B1351 BCG9842_B1351 3780484 3780657 - conserved hypothetical protein gene gene3913 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1351 BCG9842_B1352 BCG9842_B1352 BCG9842_B1352 3779806 3780393 - hypothetical protein identified by glimmer%3B putative gene gene3912 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1352 BCG9842_B1353 BCG9842_B1353 BCG9842_B1353 3779571 3779792 - conserved hypothetical protein gene gene3911 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1353 BCG9842_B1354 BCG9842_B1354 BCG9842_B1354 3778960 3779184 + conserved hypothetical protein gene gene3909 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1354 BCG9842_B1355 BCG9842_B1355 BCG9842_B1355 3779176 3779385 - hypothetical protein identified by glimmer%3B putative gene gene3910 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1355 BCG9842_B1356 BCG9842_B1356 BCG9842_B1356 3778487 3778771 - hypothetical protein identified by glimmer%3B putative gene gene3908 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1356 BCG9842_B1357 BCG9842_B1357 BCG9842_B1357 3777257 3778207 - DnaD domain protein identified by match to protein family HMM PF04271%3B match to protein family HMM TIGR01446 gene gene3907 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1357 BCG9842_B1358 BCG9842_B1358 dnaB_1 dnaB_1 3775938 3777248 - replicative DNA helicase identified by match to protein family HMM PF00772%3B match to protein family HMM PF03796%3B match to protein family HMM TIGR00665 gene gene3906 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1358 BCG9842_B1359 BCG9842_B1359 BCG9842_B1359 3775747 3775935 - hypothetical protein identified by glimmer%3B putative gene gene3905 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1359 BCG9842_B1360 BCG9842_B1360 BCG9842_B1360 3775410 3775772 - conserved hypothetical protein gene gene3904 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1360 BCG9842_B1361 BCG9842_B1361 BCG9842_B1361 3775146 3775337 - conserved hypothetical protein gene gene3903 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1361 BCG9842_B1362 BCG9842_B1362 BCG9842_B1362 3774630 3775037 + hypothetical protein identified by glimmer%3B putative gene gene3902 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1362 BCG9842_B1363 BCG9842_B1363 BCG9842_B1363 3772702 3773370 + hypothetical protein identified by glimmer%3B putative gene gene3901 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1363 BCG9842_B1364 BCG9842_B1364 BCG9842_B1364 3772240 3772521 - conserved hypothetical protein gene gene3900 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1364 BCG9842_B1365 BCG9842_B1365 BCG9842_B1365 3771824 3772132 + conserved hypothetical protein gene gene3899 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1365 BCG9842_B1366 BCG9842_B1366 BCG9842_B1366 3771712 3771873 - hypothetical protein identified by glimmer%3B putative gene gene3898 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1366 BCG9842_B1367 BCG9842_B1367 BCG9842_B1367 3771076 3771540 - phage transcriptional regulator%2C ArpU family identified by match to protein family HMM TIGR01637 gene gene3897 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1367 BCG9842_B1368 BCG9842_B1368 BCG9842_B1368 3770534 3771076 - prophage LambdaBa04%2C site-specific recombinase%2C phage integrase family identified by match to protein family HMM PF00589 gene gene3896 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1368 BCG9842_B1369 BCG9842_B1369 BCG9842_B1369 3770212 3770412 + conserved domain protein identified by match to protein family HMM PF00313 gene gene3895 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1369 BCG9842_B1370 BCG9842_B1370 BCG9842_B1370 3768890 3769603 - hypothetical protein identified by glimmer%3B putative gene gene3894 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1370 BCG9842_B1371 BCG9842_B1371 BCG9842_B1371 3767621 3768418 - conserved hypothetical protein gene gene3893 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1371 BCG9842_B1372 BCG9842_B1372 BCG9842_B1372 3767294 3767527 - conserved hypothetical protein gene gene3892 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1372 BCG9842_B1373 BCG9842_B1373 BCG9842_B1373 3767108 3767281 - hypothetical protein identified by glimmer%3B putative gene gene3891 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1373 BCG9842_B1374 BCG9842_B1374 BCG9842_B1374 3766780 3767115 - gp65 identified by match to protein family HMM PF01844 gene gene3890 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1374 BCG9842_B1375 BCG9842_B1375 BCG9842_B1375 3766345 3766656 - gp1 gene gene3889 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1375 BCG9842_B1376 BCG9842_B1376 BCG9842_B1376 3764681 3766348 - putative phage terminase%2C large subunit identified by match to protein family HMM PF03354 gene gene3888 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1376 BCG9842_B1377 BCG9842_B1377 BCG9842_B1377 3763527 3764570 - phage portal protein%2C HK97 family identified by match to protein family HMM PF04860%3B match to protein family HMM TIGR01537 gene gene3887 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1377 BCG9842_B1378 BCG9842_B1378 BCG9842_B1378 3762787 3763530 - Clp protease identified by match to protein family HMM PF00574 gene gene3886 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1378 BCG9842_B1379 BCG9842_B1379 BCG9842_B1379 3761632 3762783 - Cps gene gene3885 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1379 BCG9842_B1380 BCG9842_B1380 BCG9842_B1380 3761333 3761626 - gp7 gene gene3884 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1380 BCG9842_B1381 BCG9842_B1381 BCG9842_B1381 3760978 3761331 - phage head-tail adaptor%2C putative identified by match to protein family HMM TIGR01563 gene gene3883 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1381 BCG9842_B1382 BCG9842_B1382 BCG9842_B1382 3760632 3760976 - prophage pi2 protein 37 gene gene3882 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1382 BCG9842_B1383 BCG9842_B1383 BCG9842_B1383 3760300 3760635 - prophage pi2 protein 38 gene gene3881 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1383 BCG9842_B1384 BCG9842_B1384 BCG9842_B1384 3759712 3760299 - prophage pi2 protein 39 identified by match to protein family HMM TIGR01603 gene gene3880 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1384 BCG9842_B1385 BCG9842_B1385 BCG9842_B1385 3759345 3759707 - putative prophage pi2 protein 40 gene gene3879 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1385 BCG9842_B1386 BCG9842_B1386 BCG9842_B1386 3759130 3759291 - conserved domain protein gene gene3878 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1386 BCG9842_B1387 BCG9842_B1387 BCG9842_B1387 3757898 3759112 - TMP repeat protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts gene gene3877 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1387 BCG9842_B1389 BCG9842_B1389 BCG9842_B1389 3755226 3757643 - phage protein gene gene3876 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1389 BCG9842_B1390 BCG9842_B1390 BCG9842_B1390 3753715 3755184 - phage tail fiber protein identified by match to protein family HMM TIGR01633 gene gene3875 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1390 BCG9842_B1391 BCG9842_B1391 BCG9842_B1391 3749399 3753718 - minor structural protein identified by match to protein family HMM TIGR01665 gene gene3874 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1391 BCG9842_B1392 BCG9842_B1392 BCG9842_B1392 3749012 3749377 - hypothetical protein identified by glimmer%3B putative gene gene3873 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1392 BCG9842_B1393 BCG9842_B1393 BCG9842_B1393 3748745 3748972 - conserved domain protein gene gene3872 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1393 BCG9842_B1394 BCG9842_B1394 BCG9842_B1394 3747936 3748745 - endolysin identified by match to protein family HMM PF01183 gene gene3871 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1394 BCG9842_B1395 BCG9842_B1395 BCG9842_B1395 3747228 3747734 + conserved hypothetical protein gene gene3870 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1395 BCG9842_B1396 BCG9842_B1396 BCG9842_B1396 3745967 3746707 + conserved hypothetical protein gene gene3869 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1396 BCG9842_B1397 BCG9842_B1397 BCG9842_B1397 3744701 3745885 + hypothetical protein identified by glimmer%3B putative gene gene3868 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1397 BCG9842_B1398 BCG9842_B1398 BCG9842_B1398 3744143 3744670 + hypothetical secreted protein gene gene3867 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1398 BCG9842_B1399 BCG9842_B1399 BCG9842_B1399 3743558 3743725 - dipicolinate synthase%2C B chain gene gene3866 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1399 BCG9842_B1400 BCG9842_B1400 asd2 asd2 3742361 3743407 - aspartate-semialdehyde dehydrogenase identified by match to protein family HMM PF01118%3B match to protein family HMM PF02774%3B match to protein family HMM TIGR01296 gene gene3865 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1400 BCG9842_B1401 BCG9842_B1401 dapG2 dapG2 3741105 3742337 - aspartate kinase%2C monofunctional class identified by match to protein family HMM PF00696%3B match to protein family HMM PF01842%3B match to protein family HMM TIGR00656%3B match to protein family HMM TIGR00657 gene gene3864 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1401 BCG9842_B1402 BCG9842_B1402 dapA2 dapA2 3740215 3741093 - dihydrodipicolinate synthase identified by match to protein family HMM PF00701%3B match to protein family HMM TIGR00674 gene gene3863 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1402 BCG9842_B1403 BCG9842_B1403 BCG9842_B1403 3737618 3739288 - metallo-beta-lactamase family protein identified by match to protein family HMM PF00753%3B match to protein family HMM PF07521%3B match to protein family HMM TIGR00649 gene gene3862 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1403 BCG9842_B1404 BCG9842_B1404 clpP clpP 3736764 3737513 - clp protease identified by match to protein family HMM PF00574 gene gene3861 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1404 BCG9842_B1405 BCG9842_B1405 BCG9842_B1405 3736564 3736767 - conserved hypothetical protein gene gene3860 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1405 BCG9842_B1406 BCG9842_B1406 BCG9842_B1406 3733970 3736351 - DNA translocase FtsK identified by match to protein family HMM PF01580%3B match to protein family HMM PF09397 gene gene3859 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1406 BCG9842_B1408 BCG9842_B1408 BCG9842_B1408 3732707 3733432 - transcriptional regulator%2C GntR family identified by match to protein family HMM PF00392%3B match to protein family HMM PF07702 gene gene3858 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1408 BCG9842_B1409 BCG9842_B1409 BCG9842_B1409 3731538 3732614 - lipoprotein%2C Bmp family identified by match to protein family HMM PF02608 gene gene3857 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1409 BCG9842_B1410 BCG9842_B1410 BCG9842_B1410 3729888 3731420 - sugar ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005 gene gene3856 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1410 BCG9842_B1411 BCG9842_B1411 BCG9842_B1411 3728837 3729895 - sugar ABC transporter%2C permease protein identified by match to protein family HMM PF02653 gene gene3855 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1411 BCG9842_B1412 BCG9842_B1412 BCG9842_B1412 3727877 3728836 - sugar ABC transporter%2C permease protein identified by match to protein family HMM PF02653 gene gene3854 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1412 BCG9842_B1413 BCG9842_B1413 BCG9842_B1413 3726393 3727667 - conserved hypothetical protein identified by match to protein family HMM PF05193 gene gene3853 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1413 BCG9842_B1414 BCG9842_B1414 BCG9842_B1414 3725106 3726392 - zinc protease%2C insulinase family identified by match to protein family HMM PF00675%3B match to protein family HMM PF05193 gene gene3852 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1414 BCG9842_B1415 BCG9842_B1415 BCG9842_B1415 3724292 3725005 - oxidoreductase%2C short-chain dehydrogenase/reductase family identified by match to protein family HMM PF00106%3B match to protein family HMM PF01370%3B match to protein family HMM PF08659 gene gene3851 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1415 BCG9842_B1416 BCG9842_B1416 BCG9842_B1416 3723968 3724216 - conserved hypothetical protein gene gene3850 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1416 BCG9842_B1417 BCG9842_B1417 BCG9842_B1417 3723044 3723829 - ACT domain protein gene gene3849 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1417 BCG9842_B1418 BCG9842_B1418 BCG9842_B1418 3722108 3723022 - conserved hypothetical protein gene gene3848 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1418 BCG9842_B1419 BCG9842_B1419 pgsA pgsA 3721464 3722042 - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase identified by match to protein family HMM PF01066%3B match to protein family HMM TIGR00560 gene gene3847 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1419 BCG9842_B1420 BCG9842_B1420 cinA cinA 3720205 3721443 - competence/damage-inducible protein CinA identified by match to protein family HMM PF00994%3B match to protein family HMM PF02464%3B match to protein family HMM TIGR00177%3B match to protein family HMM TIGR00199%3B match to protein family HMM TIGR00200 gene gene3846 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1420 BCG9842_B1421 BCG9842_B1421 recA recA 3719029 3720060 - protein RecA identified by match to protein family HMM PF00154%3B match to protein family HMM TIGR02012 gene gene3845 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1421 BCG9842_B1422 BCG9842_B1422 BCG9842_B1422 3716980 3718545 - HDIG/HD/KH domain protein identified by match to protein family HMM PF00013%3B match to protein family HMM PF01966%3B match to protein family HMM TIGR00277%3B match to protein family HMM TIGR03319 gene gene3844 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1422 BCG9842_B1423 BCG9842_B1423 BCG9842_B1423 3716027 3716821 - phosphoesterase family protein identified by match to protein family HMM PF00149%3B match to protein family HMM TIGR00282 gene gene3843 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1423 BCG9842_B1424 BCG9842_B1424 spoVS2 spoVS2 3715617 3715877 - stage V sporulation protein S identified by match to protein family HMM PF04232 gene gene3842 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1424 BCG9842_B1425 BCG9842_B1425 BCG9842_B1425 3714635 3715558 - renal dipeptidase family protein identified by match to protein family HMM PF01244 gene gene3841 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1425 BCG9842_B1426 BCG9842_B1426 BCG9842_B1426 3712652 3714409 - putative pyruvate ferredoxin oxidoreductase%2C alpha subunit identified by match to protein family HMM PF01558%3B match to protein family HMM PF01855%3B match to protein family HMM PF02780 gene gene3840 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1426 BCG9842_B1427 BCG9842_B1427 BCG9842_B1427 3711799 3712665 - putative pyruvate ferredoxin oxidoreductase%2C beta subunit identified by match to protein family HMM PF02775%3B match to protein family HMM TIGR02177 gene gene3839 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1427 BCG9842_B1428 BCG9842_B1428 miaB miaB 3709841 3711370 - tRNA-i(6)A37 thiotransferase enzyme MiaB identified by match to protein family HMM PF00919%3B match to protein family HMM PF01938%3B match to protein family HMM PF04055%3B match to protein family HMM TIGR00089%3B match to protein family HMM TIGR01574 gene gene3838 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1428 BCG9842_B1429 BCG9842_B1429 BCG9842_B1429 3709406 3709837 - conserved hypothetical protein identified by match to protein family HMM PF07050 gene gene3837 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1429 BCG9842_B1430 BCG9842_B1430 cotE cotE 3708737 3709279 - spore coat protein E gene gene3836 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1430 BCG9842_B1431 BCG9842_B1431 mutS mutS 3705878 3708556 - DNA mismatch repair protein MutS identified by match to protein family HMM PF00488%3B match to protein family HMM PF01624%3B match to protein family HMM PF05188%3B match to protein family HMM PF05190%3B match to protein family HMM PF05192%3B match to protein family HMM TIGR01070 gene gene3835 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1431 BCG9842_B1432 BCG9842_B1432 mutL mutL 3703926 3705869 - DNA mismatch repair protein MutL identified by match to protein family HMM PF01119%3B match to protein family HMM PF02518%3B match to protein family HMM PF08676%3B match to protein family HMM TIGR00585 gene gene3834 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1432 BCG9842_B1433 BCG9842_B1433 BCG9842_B1433 3700175 3702958 - conserved domain protein gene gene3833 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1433 BCG9842_B1434 BCG9842_B1434 BCG9842_B1434 3698158 3700077 + sulfatase identified by match to protein family HMM PF00884 gene gene3832 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1434 BCG9842_B1435 BCG9842_B1435 BCG9842_B1435 3696316 3697653 + conserved hypothetical protein identified by match to protein family HMM PF01266 gene gene3831 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1435 BCG9842_B1436 BCG9842_B1436 BCG9842_B1436 3695253 3696050 + putative cell wall hydrolase identified by match to protein family HMM PF01476%3B match to protein family HMM PF07486 gene gene3830 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1436 BCG9842_B1437 BCG9842_B1437 BCG9842_B1437 3693117 3694958 - serine protease%2C subtilase family identified by match to protein family HMM PF00082%3B match to protein family HMM PF04151 gene gene3829 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1437 BCG9842_B1438 BCG9842_B1438 BCG9842_B1438 3691957 3692937 - phosphatidylinositol diacylglycerol-lyase identified by match to protein family HMM PF00388 gene gene3828 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1438 BCG9842_B1439 BCG9842_B1439 BCG9842_B1439 3690042 3691757 - methyl-accepting chemotaxis protein identified by match to protein family HMM PF00015%3B match to protein family HMM PF00672 gene gene3827 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1439 BCG9842_B1440 BCG9842_B1440 BCG9842_B1440 3689544 3689753 - conserved hypothetical protein gene gene3826 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1440 BCG9842_B1441 BCG9842_B1441 BCG9842_B1441 3689337 3689528 - hypothetical protein identified by glimmer%3B putative gene gene3825 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1441 BCG9842_B1442 BCG9842_B1442 BCG9842_B1442 3687717 3689150 - transcriptional regulator%2C GntR family/aminotransferase%2C class I protein identified by match to protein family HMM PF00155%3B match to protein family HMM PF00392 gene gene3824 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1442 BCG9842_B1443 BCG9842_B1443 BCG9842_B1443 3687327 3687683 - conserved hypothetical protein identified by match to protein family HMM PF03788 gene gene3823 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1443 BCG9842_B1444 BCG9842_B1444 BCG9842_B1444 3686632 3687303 - putative membrane protein identified by match to protein family HMM PF04172 gene gene3822 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1444 BCG9842_B1445 BCG9842_B1445 BCG9842_B1445 3686186 3686611 - conserved hypothetical protein gene gene3821 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1445 BCG9842_B1446 BCG9842_B1446 BCG9842_B1446 3684609 3685787 + conserved hypothetical protein gene gene3820 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1446 BCG9842_B1447 BCG9842_B1447 BCG9842_B1447 3683165 3684151 - UDP-N-acetylglucosamine 4%2C6-dehydratase identified by match to protein family HMM PF01073%3B match to protein family HMM PF01370%3B match to protein family HMM PF02719%3B match to protein family HMM PF07993 gene gene3819 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1447 BCG9842_B1448 BCG9842_B1448 BCG9842_B1448 3682257 3683168 - UDP-2-acetamido-2%2C6-dideoxy-hexulose 4-reductase identified by match to protein family HMM PF01073%3B match to protein family HMM PF01370 gene gene3818 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1448 BCG9842_B1449 BCG9842_B1449 BCG9842_B1449 3681910 3682230 - conserved hypothetical protein gene gene3817 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1449 BCG9842_B1450 BCG9842_B1450 murG murG 3680797 3681861 - undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase identified by match to protein family HMM PF03033%3B match to protein family HMM PF04101 gene gene3816 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1450 BCG9842_B1451 BCG9842_B1451 BCG9842_B1451 3677977 3680721 + sensory box/ggdef family identified by match to protein family HMM PF00563%3B match to protein family HMM PF00989%3B match to protein family HMM PF00990%3B match to protein family HMM PF08448%3B match to protein family HMM TIGR00229%3B match to protein family HMM TIGR00254 gene gene3815 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1451 BCG9842_B1452 BCG9842_B1452 BCG9842_B1452 3676757 3677572 - hydrolase%2C alpha/beta fold family identified by match to protein family HMM PF00561 gene gene3814 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1452 BCG9842_B1453 BCG9842_B1453 BCG9842_B1453 3676098 3676673 - putative phosphoglycerate mutase family protein identified by match to protein family HMM PF00300 gene gene3813 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1453 BCG9842_B1454 BCG9842_B1454 BCG9842_B1454 3675460 3675777 - hypothetical protein identified by glimmer%3B putative gene gene3812 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1454 BCG9842_B1455 BCG9842_B1455 BCG9842_B1455 3674726 3675364 + putative membrane protein identified by match to protein family HMM PF02588 gene gene3811 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1455 BCG9842_B1456 BCG9842_B1456 pepT pepT 3673297 3674529 - peptidase T identified by match to protein family HMM PF01546%3B match to protein family HMM PF07687%3B match to protein family HMM TIGR01882 gene gene3810 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1456 BCG9842_B1457 BCG9842_B1457 alkA alkA 3672347 3673258 + DNA-3-methyladenine glycosidase identified by match to protein family HMM PF00730%3B match to protein family HMM PF07934 gene gene3809 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1457 BCG9842_B1458 BCG9842_B1458 ogt2 ogt2 3671820 3672350 + methylated-DNA--protein-cysteine S-methyltransferase identified by match to protein family HMM PF01035%3B match to protein family HMM PF02870%3B match to protein family HMM TIGR00589 gene gene3808 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1458 BCG9842_B1459 BCG9842_B1459 adaA adaA 3671243 3671839 + Ada regulatory protein/6-O-methylguanine-DNA methyltransferase identified by match to protein family HMM PF00165%3B match to protein family HMM PF02805 gene gene3807 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1459 BCG9842_B1460 BCG9842_B1460 exoA exoA 3670331 3671089 - exodeoxyribonuclease III identified by match to protein family HMM PF03372%3B match to protein family HMM TIGR00195%3B match to protein family HMM TIGR00633 gene gene3806 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1460 BCG9842_B1461 BCG9842_B1461 BCG9842_B1461 3670085 3670207 + conserved hypothetical protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift gene gene3805 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1461 BCG9842_B1462 BCG9842_B1462 BCG9842_B1462 3669064 3670029 - iron compound ABC transporter%2C iron compound-binding protein identified by match to protein family HMM PF01497 gene gene3804 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1462 BCG9842_B1463 BCG9842_B1463 BCG9842_B1463 3668029 3669036 - iron compound ABC transporter%2C permease protein identified by match to protein family HMM PF01032 gene gene3803 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1463 BCG9842_B1464 BCG9842_B1464 BCG9842_B1464 3667014 3668036 - iron compound ABC transporter%2C permease protein identified by match to protein family HMM PF01032 gene gene3802 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1464 BCG9842_B1465 BCG9842_B1465 BCG9842_B1465 3666178 3666999 - iron compound ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005 gene gene3801 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1465 BCG9842_B1466 BCG9842_B1466 BCG9842_B1466 3665344 3666162 - IroE protein identified by match to protein family HMM PF00756 gene gene3800 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1466 BCG9842_B1467 BCG9842_B1467 BCG9842_B1467 3664621 3665310 + putative methyltransferase superfamily identified by match to protein family HMM PF02390%3B match to protein family HMM PF08241%3B match to protein family HMM PF08242 gene gene3799 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1467 BCG9842_B1468 BCG9842_B1468 BCG9842_B1468 3663461 3664531 - transcriptional regulator%2C LuxR family protein identified by match to protein family HMM PF00196 gene gene3798 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1468 BCG9842_B1469 BCG9842_B1469 BCG9842_B1469 3662926 3663153 - conserved domain protein gene gene3797 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1469 BCG9842_B1470 BCG9842_B1470 BCG9842_B1470 3662334 3662636 - conserved hypothetical protein identified by match to protein family HMM PF02583 gene gene3796 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1470 BCG9842_B1471 BCG9842_B1471 BCG9842_B1471 3661924 3662130 - copper-ion-binding protein identified by match to protein family HMM PF00403%3B match to protein family HMM TIGR00003 gene gene3795 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1471 BCG9842_B1472 BCG9842_B1472 BCG9842_B1472 3659408 3661828 - copper-translocating P-type ATPase identified by match to protein family HMM PF00122%3B match to protein family HMM PF00403%3B match to protein family HMM PF00702%3B match to protein family HMM TIGR00003%3B match to protein family HMM TIGR01494%3B match to protein family HMM TIGR01511%3B match to protein family HMM TIGR01525 gene gene3794 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1472 BCG9842_B1473 BCG9842_B1473 BCG9842_B1473 3658863 3659249 - acetyltransferase an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a premature stop%3B identified by match to protein family HMM PF00583 gene gene3793 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1473 BCG9842_B1474 BCG9842_B1474 hup3 hup3 3658478 3658750 + DNA-binding protein HU identified by match to protein family HMM PF00216 gene gene3792 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1474 BCG9842_B1475 BCG9842_B1475 BCG9842_B1475 3657522 3658337 + putative formate transporter identified by match to protein family HMM PF01226%3B match to protein family HMM TIGR00790 gene gene3791 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1475 BCG9842_B1476 BCG9842_B1476 BCG9842_B1476 3656436 3657329 - phosphoesterase identified by match to protein family HMM PF00149 gene gene3790 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1476 BCG9842_B1477 BCG9842_B1477 BCG9842_B1477 3655990 3656181 - peptidase M20D%2C amidohydrolase gene gene3789 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1477 BCG9842_B1478 BCG9842_B1478 chi36 chi36 3654855 3655937 + extracellular exochitinase Chi36 identified by match to protein family HMM PF00704 gene gene3788 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1478 BCG9842_B1479 BCG9842_B1479 gabP gabP 3653191 3654540 - GABA permease identified by match to protein family HMM PF00324 gene gene3787 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1479 BCG9842_B1480 BCG9842_B1480 BCG9842_B1480 3652718 3653032 - group-specific protein gene gene3786 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1480 BCG9842_B1481 BCG9842_B1481 BCG9842_B1481 3652577 3652693 - conserved hypothetical protein gene gene3785 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1481 BCG9842_B1482 BCG9842_B1482 BCG9842_B1482 3651857 3652396 - conserved hypothetical protein identified by match to protein family HMM PF04238 gene gene3784 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1482 BCG9842_B1483 BCG9842_B1483 BCG9842_B1483 3650578 3651741 - alcohol dehydrogenase%2C iron-containing identified by match to protein family HMM PF00465 gene gene3783 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1483 BCG9842_B1484 BCG9842_B1484 BCG9842_B1484 3649667 3650419 - transcriptional regulator%2C DeoR family identified by match to protein family HMM PF00455%3B match to protein family HMM PF08220 gene gene3782 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1484 BCG9842_B1485 BCG9842_B1485 fruB fruB 3648759 3649670 - 1-phosphofructokinase identified by match to protein family HMM PF00294%3B match to protein family HMM TIGR03168 gene gene3781 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1485 BCG9842_B1486 BCG9842_B1486 BCG9842_B1486 3646889 3648745 - PTS system%2C fructose-specific IIABC component identified by match to protein family HMM PF00359%3B match to protein family HMM PF02378%3B match to protein family HMM PF02379%3B match to protein family HMM TIGR00829%3B match to protein family HMM TIGR00848%3B match to protein family HMM TIGR01427 gene gene3780 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1486 BCG9842_B1487 BCG9842_B1487 BCG9842_B1487 3645608 3646540 - conserved domain protein identified by match to protein family HMM PF06347%3B match to protein family HMM PF06725%3B match to protein family HMM PF08239 gene gene3779 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1487 BCG9842_B1488 BCG9842_B1488 BCG9842_B1488 3645300 3645545 + hypothetical protein identified by glimmer%3B putative gene gene3778 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1488 BCG9842_B1489 BCG9842_B1489 miaA miaA 3644166 3645119 - tRNA delta(2)-isopentenylpyrophosphate transferase identified by match to protein family HMM PF01715%3B match to protein family HMM TIGR00174 gene gene3777 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1489 BCG9842_B1490 BCG9842_B1490 hfq2 hfq2 3643920 3644144 - host factor-I protein identified by match to protein family HMM PF01423%3B match to protein family HMM TIGR02383 gene gene3776 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1490 BCG9842_B1491 BCG9842_B1491 BCG9842_B1491 3643590 3643811 - hypothetical protein identified by glimmer%3B putative gene gene3775 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1491 BCG9842_B1492 BCG9842_B1492 BCG9842_B1492 3642899 3643381 + conserved hypothetical protein gene gene3773 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1492 BCG9842_B1493 BCG9842_B1493 BCG9842_B1493 3643344 3643478 - hypothetical protein identified by glimmer%3B putative gene gene3774 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1493 BCG9842_B1494 BCG9842_B1494 BCG9842_B1494 3641944 3642942 - conserved hypothetical protein gene gene3772 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1494 BCG9842_B1495 BCG9842_B1495 BCG9842_B1495 3640421 3641386 + site-specific recombinase%2C phage integrase family identified by match to protein family HMM PF00589%3B match to protein family HMM PF02899 gene gene3771 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1495 BCG9842_B1496 BCG9842_B1496 spoVK spoVK 3639200 3640156 - stage V sporulation protein K identified by match to protein family HMM PF00004%3B match to protein family HMM TIGR02881 gene gene3770 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1496 BCG9842_B1497 BCG9842_B1497 BCG9842_B1497 3639031 3639168 + conserved hypothetical protein gene gene3769 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1497 BCG9842_B1498 BCG9842_B1498 BCG9842_B1498 3638308 3638931 + putative membrane protein identified by match to protein family HMM PF03458 gene gene3768 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1498 BCG9842_B1499 BCG9842_B1499 BCG9842_B1499 3636941 3638218 - GTP-binding protein identified by match to protein family HMM PF01926%3B match to protein family HMM TIGR03156 gene gene3767 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1499 BCG9842_B1500 BCG9842_B1500 BCG9842_B1500 3635677 3636948 - aluminum resistance protein identified by match to protein family HMM PF01053%3B match to protein family HMM PF06838 gene gene3766 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1500 BCG9842_B1501 BCG9842_B1501 glnR glnR 3635114 3635503 - transcriptional repressor GlnR identified by match to protein family HMM PF00376 gene gene3765 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1501 BCG9842_B1502 BCG9842_B1502 glnA glnA 3633731 3635065 - glutamine synthetase%2C type I identified by match to protein family HMM PF00120%3B match to protein family HMM PF03951%3B match to protein family HMM TIGR00653 gene gene3764 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1502 BCG9842_B1503 BCG9842_B1503 BCG9842_B1503 3632673 3633392 + LexA repressor identified by match to protein family HMM PF00717%3B match to protein family HMM PF01381 gene gene3763 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1503 BCG9842_B1504 BCG9842_B1504 BCG9842_B1504 3632317 3632529 - conserved domain protein gene gene3762 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1504 BCG9842_B1505 BCG9842_B1505 BCG9842_B1505 3631362 3632120 - antirepressor identified by match to protein family HMM PF09669%3B match to protein family HMM TIGR02681 gene gene3761 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1505 BCG9842_B1506 BCG9842_B1506 BCG9842_B1506 3631156 3631350 - conserved hypothetical protein gene gene3760 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1506 BCG9842_B1507 BCG9842_B1507 BCG9842_B1507 3630116 3631003 - phage replication protein identified by match to protein family HMM PF04271%3B match to protein family HMM TIGR01446 gene gene3759 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1507 BCG9842_B1508 BCG9842_B1508 BCG9842_B1508 3629682 3629846 - hypothetical protein identified by glimmer%3B putative gene gene3758 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1508 BCG9842_B1509 BCG9842_B1509 BCG9842_B1509 3629321 3629707 - phage protein gene gene3757 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1509 BCG9842_B1510 BCG9842_B1510 BCG9842_B1510 3628097 3629086 - antigen gene gene3756 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1510 BCG9842_B1511 BCG9842_B1511 BCG9842_B1511 3627131 3627973 - cell wall endopeptidase%2C family M23/M37 identified by match to protein family HMM PF01551 gene gene3755 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1511 BCG9842_B1512 BCG9842_B1512 BCG9842_B1512 3626839 3627069 - conserved domain protein gene gene3754 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1512 BCG9842_B1513 BCG9842_B1513 BCG9842_B1513 3626144 3626467 - conserved hypothetical protein identified by match to protein family HMM PF03551 gene gene3753 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1513 BCG9842_B1514 BCG9842_B1514 BCG9842_B1514 3625609 3626151 - conserved hypothetical protein identified by match to protein family HMM PF08006 gene gene3752 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1514 BCG9842_B1515 BCG9842_B1515 BCG9842_B1515 3624805 3625608 - conserved hypothetical protein gene gene3751 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1515 BCG9842_B1516 BCG9842_B1516 lexA lexA 3624043 3624714 + LexA repressor identified by match to protein family HMM PF00717%3B match to protein family HMM PF01726%3B match to protein family HMM TIGR00498 gene gene3750 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1516 BCG9842_B1517 BCG9842_B1517 BCG9842_B1517 3623296 3623952 - site-specific recombinase%2C resolvase family identified by match to protein family HMM PF00239 gene gene3749 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1517 BCG9842_B1518 BCG9842_B1518 BCG9842_B1518 3623011 3623250 - conserved hypothetical protein identified by match to protein family HMM PF05979 gene gene3748 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1518 BCG9842_B1519 BCG9842_B1519 BCG9842_B1519 3621388 3622971 + 5'-nucleotidase family protein identified by match to protein family HMM PF00149%3B match to protein family HMM PF02872 gene gene3747 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1519 BCG9842_B1520 BCG9842_B1520 BCG9842_B1520 3620265 3621203 - putative phosphonate ABC transporter%2C phosphonate-binding protein identified by match to protein family HMM TIGR01098 gene gene3746 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1520 BCG9842_B1521 BCG9842_B1521 BCG9842_B1521 3619396 3620142 - phosphonate ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005%3B match to protein family HMM TIGR02315 gene gene3745 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1521 BCG9842_B1522 BCG9842_B1522 BCG9842_B1522 3618605 3619399 - phosphonate ABC transporter%2C permease protein identified by match to protein family HMM PF00528%3B match to protein family HMM TIGR01097 gene gene3744 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1522 BCG9842_B1523 BCG9842_B1523 BCG9842_B1523 3617802 3618605 - phosphonate ABC transporter%2C permease protein identified by match to protein family HMM PF00528%3B match to protein family HMM TIGR01097 gene gene3743 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1523 BCG9842_B1524 BCG9842_B1524 tkt2 tkt2 3615506 3617548 - transketolase identified by match to protein family HMM PF00456%3B match to protein family HMM PF02779%3B match to protein family HMM PF02780%3B match to protein family HMM TIGR00232 gene gene3742 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1524 BCG9842_B1525 BCG9842_B1525 BCG9842_B1525 3614909 3615349 - conserved hypothetical protein gene gene3741 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1525 BCG9842_B1526 BCG9842_B1526 BCG9842_B1526 3614609 3614830 - conserved hypothetical protein UPF0154 identified by match to protein family HMM PF03672 gene gene3740 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1526 BCG9842_B1527 BCG9842_B1527 BCG9842_B1527 3612735 3614486 - ABC transporter%2C permease/ATP-binding protein identified by match to protein family HMM PF00005%3B match to protein family HMM PF00664 gene gene3739 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1527 BCG9842_B1528 BCG9842_B1528 BCG9842_B1528 3610972 3612735 - ABC transporter%2C transmembrane region identified by match to protein family HMM PF00005%3B match to protein family HMM PF00664 gene gene3738 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1528 BCG9842_B1529 BCG9842_B1529 BCG9842_B1529 3609793 3610839 - N-acetylmuramoyl-L-alanine amidase identified by match to protein family HMM PF01183%3B match to protein family HMM PF08239 gene gene3737 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1529 BCG9842_B1530 BCG9842_B1530 BCG9842_B1530 3608633 3609652 - conserved hypothetical protein gene gene3736 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1530 BCG9842_B1531 BCG9842_B1531 BCG9842_B1531 3608061 3608609 - hypothetical protein identified by glimmer%3B putative gene gene3735 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1531 BCG9842_B1532 BCG9842_B1532 BCG9842_B1532 3607675 3607821 - hypothetical protein identified by glimmer%3B putative gene gene3734 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1532 BCG9842_B1533 BCG9842_B1533 BCG9842_B1533 3606821 3607576 - permease identified by match to protein family HMM PF01925 gene gene3733 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1533 BCG9842_B1534 BCG9842_B1534 BCG9842_B1534 3606253 3606453 + hypothetical protein identified by glimmer%3B putative gene gene3732 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1534 BCG9842_B1535 BCG9842_B1535 BCG9842_B1535 3605697 3606110 - mutT/nudix family protein identified by match to protein family HMM PF00293 gene gene3731 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1535 BCG9842_B1536 BCG9842_B1536 BCG9842_B1536 3605007 3605684 + putative membrane protein identified by match to protein family HMM PF04172 gene gene3730 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1536 BCG9842_B1537 BCG9842_B1537 BCG9842_B1537 3604645 3605010 + conserved hypothetical protein identified by match to protein family HMM PF03788 gene gene3729 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1537 BCG9842_B1538 BCG9842_B1538 BCG9842_B1538 3603592 3604491 - transcriptional regulator%2C LysR family identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466 gene gene3728 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1538 BCG9842_B1539 BCG9842_B1539 BCG9842_B1539 3602899 3603498 + hypothetical protein identified by glimmer%3B putative gene gene3727 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1539 BCG9842_B1540 BCG9842_B1540 BCG9842_B1540 3602132 3602728 - ABC transporter permease protein gene gene3726 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1540 BCG9842_B1541 BCG9842_B1541 BCG9842_B1541 3600637 3602106 - transposase%2C family identified by match to protein family HMM PF07282%3B match to protein family HMM TIGR01766 gene gene3725 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1541 BCG9842_B1542 BCG9842_B1542 BCG9842_B1542 3599601 3600512 - bacitracin transport ATP-binding protein BcrA an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a premature stop%3B identified by match to protein family HMM PF00005 gene gene3724 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1542 BCG9842_B1543 BCG9842_B1543 BCG9842_B1543 3598664 3599608 - bacitracin transport permease protein bcrb gene gene3723 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1543 BCG9842_B1544 BCG9842_B1544 BCG9842_B1544 3597471 3598616 + thermostable carboxypeptidase 1 identified by match to protein family HMM PF01546%3B match to protein family HMM PF07687%3B match to protein family HMM TIGR01891 gene gene3722 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1544 BCG9842_B1545 BCG9842_B1545 BCG9842_B1545 3596469 3597383 + transporter%2C Drug/Metabolite Exporter family identified by match to protein family HMM PF00892 gene gene3721 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1545 BCG9842_B1546 BCG9842_B1546 BCG9842_B1546 3596354 3596470 - hypothetical protein identified by glimmer%3B putative gene gene3720 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1546 BCG9842_B1547 BCG9842_B1547 BCG9842_B1547 3595997 3596140 - hypothetical protein identified by glimmer%3B putative gene gene3719 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1547 BCG9842_B1548 BCG9842_B1548 ccdA2 ccdA2 3595273 3595980 - cytochrome c-type biogenesis protein CcdA identified by match to protein family HMM PF02683 gene gene3718 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1548 BCG9842_B1549 BCG9842_B1549 BCG9842_B1549 3594676 3595182 - ccdC protein identified by match to protein family HMM PF07301 gene gene3717 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1549 BCG9842_B1550 BCG9842_B1550 BCG9842_B1550 3594174 3594605 + conserved protein YneK gene gene3716 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1550 BCG9842_B1551 BCG9842_B1551 BCG9842_B1551 3593774 3594070 + hypothetical protein identified by glimmer%3B putative gene gene3715 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1551 BCG9842_B1552 BCG9842_B1552 BCG9842_B1552 3592941 3593519 - conserved hypothetical protein gene gene3714 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1552 BCG9842_B1553 BCG9842_B1553 BCG9842_B1553 3592372 3592944 - thiJ/pfpI family protein identified by match to protein family HMM PF01965 gene gene3713 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1553 BCG9842_B1554 BCG9842_B1554 BCG9842_B1554 3591411 3592358 + conserved domain protein identified by match to protein family HMM PF05401%3B match to protein family HMM PF08241%3B match to protein family HMM PF08242 gene gene3712 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1554 BCG9842_B1555 BCG9842_B1555 hutP hutP 3590776 3591216 - hut operon transcriptional activator identified by match to protein family HMM PF09021 gene gene3711 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1555 BCG9842_B1556 BCG9842_B1556 hutH hutH 3589153 3590670 - histidine ammonia-lyase identified by match to protein family HMM PF00221%3B match to protein family HMM TIGR01225 gene gene3710 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1556 BCG9842_B1557 BCG9842_B1557 hutU hutU 3587471 3589129 - urocanate hydratase identified by match to protein family HMM PF01175%3B match to protein family HMM TIGR01228 gene gene3709 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1557 BCG9842_B1558 BCG9842_B1558 hutI hutI 3586187 3587458 - imidazolonepropionase identified by match to protein family HMM PF01979%3B match to protein family HMM PF07969%3B match to protein family HMM TIGR01224 gene gene3708 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1558 BCG9842_B1559 BCG9842_B1559 hutG hutG 3585237 3586208 - formimidoylglutamase identified by match to protein family HMM PF00491%3B match to protein family HMM TIGR01227 gene gene3707 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1559 BCG9842_B1560 BCG9842_B1560 BCG9842_B1560 3584514 3584990 - transcriptional regulator%2C CarD family identified by match to protein family HMM PF02559 gene gene3706 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1560 BCG9842_B1561 BCG9842_B1561 BCG9842_B1561 3582823 3583950 - NADH-dependent flavin oxidoreductase%2C Oye family identified by match to protein family HMM PF00724 gene gene3705 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1561 BCG9842_B1562 BCG9842_B1562 BCG9842_B1562 3581181 3582755 - ferredoxin-dependent glutamate synthase identified by match to protein family HMM PF01645 gene gene3704 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1562 BCG9842_B1563 BCG9842_B1563 BCG9842_B1563 3580580 3581068 - CcdC protein gene gene3703 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1563 BCG9842_B1564 BCG9842_B1564 BCG9842_B1564 3578804 3580282 - sodium/proline symporter family protein identified by match to protein family HMM PF00474%3B match to protein family HMM TIGR00813%3B match to protein family HMM TIGR02121 gene gene3702 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1564 BCG9842_B1565 BCG9842_B1565 BCG9842_B1565 3577525 3578463 - glyoxylase family protein identified by match to protein family HMM PF00903 gene gene3701 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1565 BCG9842_B1566 BCG9842_B1566 BCG9842_B1566 3576892 3577500 - carboxylesterase identified by match to protein family HMM PF02230 gene gene3700 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1566 BCG9842_B1567 BCG9842_B1567 kinA kinA 3575316 3576848 + sporulation kinase A identified by match to protein family HMM PF00512%3B match to protein family HMM PF00989%3B match to protein family HMM PF02518%3B match to protein family HMM PF08448%3B match to protein family HMM TIGR00229 gene gene3699 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1567 BCG9842_B1568 BCG9842_B1568 BCG9842_B1568 3575050 3575319 + hypothetical protein identified by glimmer%3B putative gene gene3698 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1568 BCG9842_B1569 BCG9842_B1569 BCG9842_B1569 3574708 3575079 - glyoxalase family protein identified by match to protein family HMM PF00903 gene gene3697 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1569 BCG9842_B1570 BCG9842_B1570 BCG9842_B1570 3573879 3574688 + putative membrane protein identified by match to protein family HMM PF02588 gene gene3696 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1570 BCG9842_B1571 BCG9842_B1571 BCG9842_B1571 3572931 3573734 - hypothetical protein identified by glimmer%3B putative gene gene3695 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1571 BCG9842_B1572 BCG9842_B1572 BCG9842_B1572 3572463 3572915 - putative N-acetylmuramoyl-L-alanine amidase identified by match to protein family HMM PF01510 gene gene3694 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1572 BCG9842_B1573 BCG9842_B1573 BCG9842_B1573 3572195 3572443 - conserved hypothetical protein gene gene3693 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1573 BCG9842_B1574 BCG9842_B1574 BCG9842_B1574 3571960 3572172 + conserved hypothetical protein identified by match to protein family HMM PF05532 gene gene3692 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1574 BCG9842_B1575 BCG9842_B1575 BCG9842_B1575 3571441 3571788 + hypothetical protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by glimmer%3B putative gene gene3691 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1575 BCG9842_B1576 BCG9842_B1576 BCG9842_B1576 3570974 3571390 + acetyltransferase%2C gnat family an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift gene gene3690 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1576 BCG9842_B1577 BCG9842_B1577 BCG9842_B1577 3570618 3570821 - conserved hypothetical protein gene gene3689 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1577 BCG9842_B1578 BCG9842_B1578 BCG9842_B1578 3569387 3570175 - helix-turn-helix domain protein identified by match to protein family HMM PF01381 gene gene3688 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1578 BCG9842_B1579 BCG9842_B1579 alkK alkK 3567605 3569218 - medium-chain-fatty-acid--CoA ligase identified by match to protein family HMM PF00501 gene gene3687 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1579 BCG9842_B1580 BCG9842_B1580 BCG9842_B1580 3566906 3567481 - bioY family protein identified by match to protein family HMM PF02632 gene gene3686 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1580 BCG9842_B1581 BCG9842_B1581 BCG9842_B1581 3565377 3566840 - AMP-binding protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a premature stop%3B identified by match to protein family HMM PF00501 gene gene3685 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1581 BCG9842_B1582 BCG9842_B1582 BCG9842_B1582 3564293 3565384 - acetyl-CoA acetyltransferase identified by match to protein family HMM PF00108%3B match to protein family HMM PF02803%3B match to protein family HMM TIGR01930 gene gene3684 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1582 BCG9842_B1583 BCG9842_B1583 BCG9842_B1583 3563703 3564284 + hypothetical protein identified by glimmer%3B putative gene gene3683 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1583 BCG9842_B1584 BCG9842_B1584 BCG9842_B1584 3563155 3563598 - mutT/nudix family protein identified by match to protein family HMM PF00293 gene gene3682 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1584 BCG9842_B1585 BCG9842_B1585 BCG9842_B1585 3561908 3563110 + alanyl-tRNA synthetase family protein identified by match to protein family HMM PF02272%3B match to protein family HMM PF07973 gene gene3681 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1585 BCG9842_B1586 BCG9842_B1586 BCG9842_B1586 3561363 3561770 - conserved domain protein gene gene3680 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1586 BCG9842_B1587 BCG9842_B1587 BCG9842_B1587 3560055 3561296 - conserved domain protein identified by match to protein family HMM PF07690 gene gene3679 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1587 BCG9842_B1588 BCG9842_B1588 cotM cotM 3559626 3560006 + spore coat protein M gene gene3678 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1588 BCG9842_B1589 BCG9842_B1589 BCG9842_B1589 3559379 3559501 + conserved domain protein identified by match to protein family HMM PF08179 gene gene3677 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1589 BCG9842_B1590 BCG9842_B1590 BCG9842_B1590 3558994 3559257 - conserved domain protein gene gene3676 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1590 BCG9842_B1591 BCG9842_B1591 BCG9842_B1591 3558222 3558947 - putative polysaccharide deacetylase identified by match to protein family HMM PF01522%3B match to protein family HMM TIGR02764 gene gene3675 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1591 BCG9842_B1592 BCG9842_B1592 sspO sspO 3558031 3558180 + small%2C acid-soluble spore protein O identified by match to protein family HMM PF08175%3B match to protein family HMM TIGR02864 gene gene3674 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1592 BCG9842_B1593 BCG9842_B1593 acnA acnA 3555016 3557739 - aconitate hydratase 1 identified by match to protein family HMM PF00330%3B match to protein family HMM PF00694%3B match to protein family HMM TIGR01341 gene gene3673 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1593 BCG9842_B1594 BCG9842_B1594 BCG9842_B1594 3553249 3554898 - ABC transporter%2C permease/ATP-binding protein identified by match to protein family HMM PF00005%3B match to protein family HMM PF00664 gene gene3672 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1594 BCG9842_B1595 BCG9842_B1595 BCG9842_B1595 3552968 3553225 + hypothetical protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by glimmer%3B putative gene gene3671 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1595 BCG9842_B1596 BCG9842_B1596 BCG9842_B1596 3552140 3552715 - ahpC/TSA family protein identified by match to protein family HMM PF00085%3B match to protein family HMM PF00578%3B match to protein family HMM PF08534 gene gene3670 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1596 BCG9842_B1597 BCG9842_B1597 BCG9842_B1597 3551077 3552024 - putative DNA polymerase III%2C epsilon subunit identified by match to protein family HMM PF00929%3B match to protein family HMM TIGR00573 gene gene3669 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1597 BCG9842_B1598 BCG9842_B1598 BCG9842_B1598 3550794 3550946 - conserved hypothetical protein gene gene3668 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1598 BCG9842_B1599 BCG9842_B1599 sspN sspN 3550616 3550750 - small%2C acid-soluble spore protein N identified by match to protein family HMM PF08177 gene gene3667 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1599 BCG9842_B1600 BCG9842_B1600 BCG9842_B1600 3549237 3550529 + glycosyl hydrolase%2C family 18 identified by match to protein family HMM PF00704%3B match to protein family HMM PF01476 gene gene3666 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1600 BCG9842_B1601 BCG9842_B1601 BCG9842_B1601 3548708 3549127 - putative 4-hydroxybenzoyl-CoA thioesterase identified by match to protein family HMM PF03061%3B match to protein family HMM TIGR00051 gene gene3665 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1601 BCG9842_B1602 BCG9842_B1602 BCG9842_B1602 3548391 3548681 + conserved hypothetical protein identified by match to protein family HMM PF01521 gene gene3664 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1602 BCG9842_B1603 BCG9842_B1603 BCG9842_B1603 3547686 3548282 + conserved hypothetical protein identified by match to protein family HMM PF02660%3B match to protein family HMM TIGR00023 gene gene3663 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1603 BCG9842_B1604 BCG9842_B1604 BCG9842_B1604 3545604 3547460 - putative anaerobic ribonucleoside-triphosphate reductase identified by match to protein family HMM TIGR02487 gene gene3662 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1604 BCG9842_B1605 BCG9842_B1605 BCG9842_B1605 3545155 3545607 - putative anaerobic ribonucleoside-triphosphate reductase activating protein identified by match to protein family HMM TIGR02491 gene gene3661 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1605 BCG9842_B1606 BCG9842_B1606 BCG9842_B1606 3544459 3545136 - DNA-binding response regulator identified by match to protein family HMM PF00072%3B match to protein family HMM PF00486 gene gene3660 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1606 BCG9842_B1607 BCG9842_B1607 htrA htrA 3543014 3544255 - serine protease HtrA identified by match to protein family HMM PF00089 gene gene3659 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1607 BCG9842_B1608 BCG9842_B1608 BCG9842_B1608 3542521 3542934 - CoA binding domain family protein identified by match to protein family HMM PF02629 gene gene3658 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1608 BCG9842_B1609 BCG9842_B1609 parE parE 3540181 3542145 - DNA topoisomerase IV%2C B subunit identified by match to protein family HMM PF00204%3B match to protein family HMM PF00986%3B match to protein family HMM PF02518%3B match to protein family HMM TIGR01058 gene gene3657 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1609 BCG9842_B1610 BCG9842_B1610 parC parC 3537756 3540179 - DNA topoisomerase IV%2C A subunit identified by match to protein family HMM PF00521%3B match to protein family HMM PF03989%3B match to protein family HMM TIGR01061 gene gene3656 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1610 BCG9842_B1611 BCG9842_B1611 BCG9842_B1611 3536319 3537350 - oxidoreductase%2C Gfo/Idh/MocA family identified by match to protein family HMM PF01118%3B match to protein family HMM PF01408%3B match to protein family HMM PF02894%3B match to protein family HMM PF03447 gene gene3655 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1611 BCG9842_B1612 BCG9842_B1612 BCG9842_B1612 3535819 3536262 + PhnB protein identified by match to protein family HMM PF06983 gene gene3654 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1612 BCG9842_B1613 BCG9842_B1613 BCG9842_B1613 3534791 3535735 - transcriptional regulator%2C DeoR family identified by match to protein family HMM PF08220%3B match to protein family HMM PF08279 gene gene3653 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1613 BCG9842_B1614 BCG9842_B1614 BCG9842_B1614 3534105 3534698 + transcriptional regulator%2C TetR family identified by match to protein family HMM PF00440 gene gene3652 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1614 BCG9842_B1615 BCG9842_B1615 BCG9842_B1615 3533047 3533940 - ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005 gene gene3651 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1615 BCG9842_B1616 BCG9842_B1616 BCG9842_B1616 3532248 3533054 - ABC transporter%2C permease protein gene gene3650 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1616 BCG9842_B1617 BCG9842_B1617 BCG9842_B1617 3531519 3532052 - RNA polymerase sigma-70 factor%2C ECF subfamily identified by match to protein family HMM PF04542%3B match to protein family HMM PF04545%3B match to protein family HMM PF08281%3B match to protein family HMM TIGR02937 gene gene3649 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1617 BCG9842_B1618 BCG9842_B1618 BCG9842_B1618 3530520 3531506 - hypothetical protein identified by glimmer%3B putative gene gene3648 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1618 BCG9842_B1619 BCG9842_B1619 BCG9842_B1619 3529461 3530498 - transcription antiterminator%2C LytR family identified by match to protein family HMM PF03816%3B match to protein family HMM TIGR00350 gene gene3647 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1619 BCG9842_B1620 BCG9842_B1620 BCG9842_B1620 3527999 3529261 - C4-dicarboxylate transporter identified by match to protein family HMM PF00375 gene gene3646 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1620 BCG9842_B1621 BCG9842_B1621 BCG9842_B1621 3525946 3527649 - putative oligopeptide ABC transporter%2C oligopeptide-binding protein identified by match to protein family HMM PF00496 gene gene3645 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1621 BCG9842_B1622 BCG9842_B1622 BCG9842_B1622 3525482 3525637 - oligopeptide-binding protein OppA an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift gene gene3644 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1622 BCG9842_B1623 BCG9842_B1623 BCG9842_B1623 3523905 3525452 - oligopeptide-binding protein OppA an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF00496 gene gene3643 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1623 BCG9842_B1624 BCG9842_B1624 BCG9842_B1624 3521837 3523531 - oligopeptide ABC transporter%2C oligopeptide-binding protein identified by match to protein family HMM PF00496 gene gene3642 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1624 BCG9842_B1625 BCG9842_B1625 BCG9842_B1625 3521035 3521754 - conserved hypothetical protein identified by match to protein family HMM PF08241%3B match to protein family HMM PF08242 gene gene3641 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1625 BCG9842_B1626 BCG9842_B1626 BCG9842_B1626 3520602 3520994 + conserved hypothetical protein gene gene3640 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1626 BCG9842_B1627 BCG9842_B1627 BCG9842_B1627 3520130 3520465 - group-specific protein gene gene3639 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1627 BCG9842_B1628 BCG9842_B1628 BCG9842_B1628 3519720 3520058 - glyoxalase family protein identified by match to protein family HMM PF00903 gene gene3638 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1628 BCG9842_B1629 BCG9842_B1629 BCG9842_B1629 3517363 3519462 - hypothetical protein identified by glimmer%3B putative gene gene3637 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1629 BCG9842_B1630 BCG9842_B1630 BCG9842_B1630 3513921 3517283 - hypothetical protein identified by glimmer%3B putative gene gene3636 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1630 BCG9842_B1631 BCG9842_B1631 BCG9842_B1631 3513729 3513863 - hypothetical protein identified by glimmer%3B putative gene gene3635 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1631 BCG9842_B1632 BCG9842_B1632 gerSC gerSC 3512515 3513651 + spore germination protein identified by match to protein family HMM PF05504%3B match to protein family HMM TIGR02887 gene gene3634 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1632 BCG9842_B1633 BCG9842_B1633 gerSB gerSB 3511417 3512514 + spore germination protein identified by match to protein family HMM PF03845%3B match to protein family HMM TIGR00912 gene gene3633 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1633 BCG9842_B1634 BCG9842_B1634 gerSA gerSA 3509882 3511420 + spore germination protein identified by match to protein family HMM PF03323 gene gene3632 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1634 BCG9842_B1635 BCG9842_B1635 BCG9842_B1635 3509576 3509743 - hypothetical protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by glimmer%3B putative gene gene3631 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1635 BCG9842_B1636 BCG9842_B1636 BCG9842_B1636 3506644 3509583 - molybdopterin oxidoreductase family protein identified by match to protein family HMM PF00037%3B match to protein family HMM PF00111%3B match to protein family HMM PF00384%3B match to protein family HMM PF01568%3B match to protein family HMM PF04879%3B match to protein family HMM TIGR01591 gene gene3630 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1636 BCG9842_B1637 BCG9842_B1637 BCG9842_B1637 3506149 3506631 - conserved hypothetical protein identified by match to protein family HMM PF07849 gene gene3629 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1637 BCG9842_B1638 BCG9842_B1638 BCG9842_B1638 3505689 3506033 - conserved hypothetical protein gene gene3628 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1638 BCG9842_B1639 BCG9842_B1639 fdhD2 fdhD2 3504875 3505546 - formate dehydrogenase accessory protein FdhD identified by match to protein family HMM PF02634%3B match to protein family HMM TIGR00129 gene gene3627 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1639 BCG9842_B1640 BCG9842_B1640 narA2 narA2 3503842 3504858 - molybdenum cofactor biosynthesis protein A identified by match to protein family HMM PF04055%3B match to protein family HMM PF06463%3B match to protein family HMM TIGR02666 gene gene3626 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1640 BCG9842_B1641 BCG9842_B1641 BCG9842_B1641 3502871 3503692 - putative formate transporter identified by match to protein family HMM PF01226 gene gene3625 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1641 BCG9842_B1642 BCG9842_B1642 BCG9842_B1642 3501830 3502846 - putative molybdopterin biosynthesis protein MoeB identified by match to protein family HMM PF00899%3B match to protein family HMM PF05237 gene gene3624 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1642 BCG9842_B1643 BCG9842_B1643 moeA2 moeA2 3500505 3501812 - molybdopterin biosynthesis protein MoeA identified by match to protein family HMM PF00994%3B match to protein family HMM PF03453%3B match to protein family HMM PF03454%3B match to protein family HMM TIGR00177 gene gene3623 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1643 BCG9842_B1644 BCG9842_B1644 moaE2 moaE2 3500060 3500524 - molybdopterin converting factor%2C subunit 2 identified by match to protein family HMM PF02391 gene gene3622 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1644 BCG9842_B1645 BCG9842_B1645 moaD2 moaD2 3499819 3500055 - molybdopterin converting factor%2C subunit 1 identified by match to protein family HMM PF02597%3B match to protein family HMM TIGR01682 gene gene3621 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1645 BCG9842_B1646 BCG9842_B1646 BCG9842_B1646 3498697 3499746 - mrp protein identified by match to protein family HMM PF01883 gene gene3620 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1646 BCG9842_B1647 BCG9842_B1647 BCG9842_B1647 3498457 3498681 - conserved domain protein gene gene3619 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1647 BCG9842_B1648 BCG9842_B1648 BCG9842_B1648 3498016 3498414 - hypothetical protein identified by glimmer%3B putative gene gene3618 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1648 BCG9842_B1649 BCG9842_B1649 BCG9842_B1649 3497585 3497833 - putative membrane protein identified by match to protein family HMM PF06961 gene gene3617 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1649 BCG9842_B1650 BCG9842_B1650 BCG9842_B1650 3496551 3497492 - rarD protein identified by match to protein family HMM PF00892%3B match to protein family HMM TIGR00688 gene gene3616 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1650 BCG9842_B1651 BCG9842_B1651 BCG9842_B1651 3496046 3496471 - conserved hypothetical protein identified by match to protein family HMM PF02681 gene gene3615 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1651 BCG9842_B1652 BCG9842_B1652 BCG9842_B1652 3494093 3495946 - putative squalene-hopene cyclase identified by match to protein family HMM PF00432%3B match to protein family HMM TIGR01787 gene gene3614 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1652 BCG9842_B1653 BCG9842_B1653 BCG9842_B1653 3493870 3494019 + hypothetical protein identified by glimmer%3B putative gene gene3613 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1653 BCG9842_B1654 BCG9842_B1654 BCG9842_B1654 3492997 3493737 - putative 3-oxoacyl-(acyl-carrier-protein) reductase identified by match to protein family HMM PF00106%3B match to protein family HMM PF08659 gene gene3612 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1654 BCG9842_B1655 BCG9842_B1655 dhaS dhaS 3491462 3492946 + aldehyde dehydrogenase (NAD) identified by match to protein family HMM PF00171 gene gene3611 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1655 BCG9842_B1656 BCG9842_B1656 BCG9842_B1656 3490910 3491188 - conserved hypothetical protein identified by match to protein family HMM PF06196 gene gene3610 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1656 BCG9842_B1657 BCG9842_B1657 BCG9842_B1657 3489473 3490906 - putative sodium/pantothenate symporter identified by match to protein family HMM PF00474%3B match to protein family HMM TIGR00813%3B match to protein family HMM TIGR02119 gene gene3609 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1657 BCG9842_B1658 BCG9842_B1658 BCG9842_B1658 3488418 3489350 - inosine-uridine preferring nucleoside hydrolase family protein identified by match to protein family HMM PF01156 gene gene3608 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1658 BCG9842_B1659 BCG9842_B1659 BCG9842_B1659 3487191 3488300 - hypothetical protein identified by glimmer%3B putative gene gene3607 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1659 BCG9842_B1660 BCG9842_B1660 argH1 argH1 3485581 3487089 - argininosuccinate lyase identified by match to protein family HMM PF00206%3B match to protein family HMM TIGR00838 gene gene3606 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1660 BCG9842_B1661 BCG9842_B1661 BCG9842_B1661 3484681 3485514 - acetyltransferase%2C GNAT family identified by match to protein family HMM PF00583 gene gene3605 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1661 BCG9842_B1662 BCG9842_B1662 BCG9842_B1662 3483896 3484645 + oxidoreductase%2C short-chain dehydrogenase/reductase family identified by match to protein family HMM PF00106 gene gene3604 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1662 BCG9842_B1663 BCG9842_B1663 BCG9842_B1663 3476307 3483779 - conserved repeat domain protein identified by match to protein family HMM PF01345%3B match to protein family HMM TIGR01451 gene gene3603 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1663 BCG9842_B1664 BCG9842_B1664 BCG9842_B1664 3475700 3476257 + acetyltransferase%2C CYSE/LACA/LPXA/NODL family gene gene3602 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1664 BCG9842_B1665 BCG9842_B1665 BCG9842_B1665 3475232 3475573 - conserved hypothetical protein identified by match to protein family HMM PF04266 gene gene3601 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1665 BCG9842_B1666 BCG9842_B1666 BCG9842_B1666 3474837 3475235 - mutT/nudix family protein identified by match to protein family HMM PF00293 gene gene3600 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1666 BCG9842_B1667 BCG9842_B1667 BCG9842_B1667 3474130 3474750 - putative membrane protein gene gene3599 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1667 BCG9842_B1668 BCG9842_B1668 BCG9842_B1668 3473378 3473821 - flavodoxin identified by match to protein family HMM PF00258%3B match to protein family HMM TIGR01753 gene gene3598 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1668 BCG9842_B1669 BCG9842_B1669 BCG9842_B1669 3472462 3473361 - BNR repeat domain protein gene gene3597 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1669 BCG9842_B1670 BCG9842_B1670 cspB2 cspB2 3472046 3472246 - cold shock protein CspB identified by match to protein family HMM PF00313 gene gene3596 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1670 BCG9842_B1671 BCG9842_B1671 BCG9842_B1671 3471013 3471858 - exonuclease family protein identified by match to protein family HMM PF00929 gene gene3595 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1671 BCG9842_B1672 BCG9842_B1672 BCG9842_B1672 3470280 3470627 - hypothetical protein identified by glimmer%3B putative gene gene3594 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1672 BCG9842_B1673 BCG9842_B1673 BCG9842_B1673 3468935 3470026 + conserved hypothetical protein gene gene3593 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1673 BCG9842_B1674 BCG9842_B1674 BCG9842_B1674 3468774 3468890 - hypothetical protein identified by glimmer%3B putative gene gene3592 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1674 BCG9842_B1675 BCG9842_B1675 BCG9842_B1675 3468410 3468748 + conserved hypothetical protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift gene gene3591 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1675 BCG9842_B1676 BCG9842_B1676 BCG9842_B1676 3467118 3468029 - putative lipoprotein identified by match to protein family HMM PF04294 gene gene3590 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1676 BCG9842_B1677 BCG9842_B1677 BCG9842_B1677 3466034 3466942 - glyoxalase family protein identified by match to protein family HMM PF00903 gene gene3589 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1677 BCG9842_B1678 BCG9842_B1678 BCG9842_B1678 3465468 3465986 + acetyltransferase%2C GNAT family identified by match to protein family HMM PF00583 gene gene3588 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1678 BCG9842_B1679 BCG9842_B1679 BCG9842_B1679 3464499 3465176 - mgtC family protein identified by match to protein family HMM PF02308 gene gene3587 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1679 BCG9842_B1680 BCG9842_B1680 BCG9842_B1680 3461382 3464297 - putative microbial collagenase identified by match to protein family HMM PF00801%3B match to protein family HMM PF01752%3B match to protein family HMM PF04151%3B match to protein family HMM PF08453 gene gene3586 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1680 BCG9842_B1681 BCG9842_B1681 BCG9842_B1681 3459771 3461051 + sporulation kinase identified by match to protein family HMM PF00512%3B match to protein family HMM PF02518 gene gene3585 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1681 BCG9842_B1682 BCG9842_B1682 BCG9842_B1682 3458710 3459150 - hypothetical protein identified by glimmer%3B putative gene gene3584 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1682 BCG9842_B1683 BCG9842_B1683 BCG9842_B1683 3457819 3458172 + conserved hypothetical protein gene gene3583 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1683 BCG9842_B1684 BCG9842_B1684 BCG9842_B1684 3453962 3457129 - collagen adhesion protein identified by match to protein family HMM PF00746%3B match to protein family HMM PF05738%3B match to protein family HMM TIGR01167 gene gene3582 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1684 BCG9842_B1685 BCG9842_B1685 BCG9842_B1685 3453630 3453884 + protein _2307 gene gene3581 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1685 BCG9842_B1686 BCG9842_B1686 BCG9842_B1686 3452628 3453371 - D-alanyl-D-alanine carboxypeptidase family protein identified by match to protein family HMM PF02557 gene gene3580 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1686 BCG9842_B1687 BCG9842_B1687 BCG9842_B1687 3450664 3451896 - N-acetylmuramoyl-L-alanine amidase%2C family 3 identified by match to protein family HMM PF00395%3B match to protein family HMM PF01520 gene gene3579 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1687 BCG9842_B1688 BCG9842_B1688 BCG9842_B1688 3449121 3450359 - hemolysin II identified by match to protein family HMM PF07968%3B match to protein family HMM TIGR01002 gene gene3578 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1688 BCG9842_B1689 BCG9842_B1689 BCG9842_B1689 3448008 3448613 - transcriptional regulator%2C TetR family identified by match to protein family HMM PF00440 gene gene3577 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1689 BCG9842_B1690 BCG9842_B1690 BCG9842_B1690 3446377 3447855 + ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005 gene gene3576 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1690 BCG9842_B1691 BCG9842_B1691 BCG9842_B1691 3442622 3445138 - sensory box/GGDEF family protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF00563%3B match to protein family HMM PF00990%3B match to protein family HMM PF08448%3B match to protein family HMM TIGR00229%3B match to protein family HMM TIGR00254 gene gene3575 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1691 BCG9842_B1692 BCG9842_B1692 BCG9842_B1692 3442240 3442470 - response regulator aspartate phosphatase an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift gene gene3574 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1692 BCG9842_B1693 BCG9842_B1693 BCG9842_B1693 3441825 3441947 - hypothetical protein identified by glimmer%3B putative gene gene3573 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1693 BCG9842_B1694 BCG9842_B1694 BCG9842_B1694 3440459 3441769 - glycosidase%2C family 5 identified by match to protein family HMM PF00150 gene gene3572 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1694 BCG9842_B1695 BCG9842_B1695 BCG9842_B1695 3437792 3439999 - S-layer domain protein gene gene3571 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1695 BCG9842_B1696 BCG9842_B1696 BCG9842_B1696 3436918 3437466 - conserved domain protein gene gene3570 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1696 BCG9842_B1697 BCG9842_B1697 BCG9842_B1697 3435043 3435348 - conserved hypothetical protein gene gene3569 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1697 BCG9842_B1698 BCG9842_B1698 BCG9842_B1698 3434411 3434785 + hypothetical protein identified by glimmer%3B putative gene gene3568 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1698 BCG9842_B1699 BCG9842_B1699 BCG9842_B1699 3431409 3433391 - methyl-accepting chemotaxis protein identified by match to protein family HMM PF00015%3B match to protein family HMM PF00672%3B match to protein family HMM PF02203%3B match to protein family HMM PF02743 gene gene3567 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1699 BCG9842_B1700 BCG9842_B1700 BCG9842_B1700 3431099 3431260 + hypothetical protein identified by glimmer%3B putative gene gene3566 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1700 BCG9842_B1701 BCG9842_B1701 BCG9842_B1701 3429984 3431099 + TPR domain protein identified by match to protein family HMM PF00515 gene gene3565 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1701 BCG9842_B1702 BCG9842_B1702 rfbG_1 rfbG_1 3427735 3428823 + CDP-glucose 4%2C6-dehydratase identified by match to protein family HMM PF01073%3B match to protein family HMM PF01370%3B match to protein family HMM PF02719%3B match to protein family HMM TIGR02622 gene gene3564 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1702 BCG9842_B1703 BCG9842_B1703 BCG9842_B1703 3426747 3427706 + CDP-abequose synthase identified by match to protein family HMM PF00106%3B match to protein family HMM PF01073%3B match to protein family HMM PF01370%3B match to protein family HMM PF02719%3B match to protein family HMM PF04321%3B match to protein family HMM PF07993 gene gene3563 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1703 BCG9842_B1704 BCG9842_B1704 BCG9842_B1704 3424623 3426692 + hypothetical Glycosyltransferase gene gene3562 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1704 BCG9842_B1705 BCG9842_B1705 BCG9842_B1705 3423853 3424602 + glucose-1-phosphate cytidylyltransferase identified by match to protein family HMM PF00483 gene gene3561 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1705 BCG9842_B1706 BCG9842_B1706 BCG9842_B1706 3422615 3423289 + conserved hypothetical protein identified by match to protein family HMM PF08795 gene gene3560 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1706 BCG9842_B1707 BCG9842_B1707 BCG9842_B1707 3421077 3422204 + GerZC identified by match to protein family HMM PF05504%3B match to protein family HMM TIGR02887 gene gene3559 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1707 BCG9842_B1708 BCG9842_B1708 BCG9842_B1708 3419977 3421080 + GerZB identified by match to protein family HMM PF03845%3B match to protein family HMM TIGR00912 gene gene3558 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1708 BCG9842_B1709 BCG9842_B1709 BCG9842_B1709 3418482 3419975 + GerZA identified by match to protein family HMM PF03323 gene gene3557 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1709 BCG9842_B1710 BCG9842_B1710 BCG9842_B1710 3416619 3417662 + conserved hypothetical protein gene gene3556 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1710 BCG9842_B1711 BCG9842_B1711 BCG9842_B1711 3415307 3415420 - hypothetical protein identified by glimmer%3B putative gene gene3555 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1711 BCG9842_B1712 BCG9842_B1712 BCG9842_B1712 3413953 3415329 - chitin-binding domain protein identified by match to protein family HMM PF00041%3B match to protein family HMM PF02839%3B match to protein family HMM PF03067 gene gene3554 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1712 BCG9842_B1713 BCG9842_B1713 BCG9842_B1713 3412265 3413680 + 1-phosphatidylinositol phosphodiesterase (Phosphatidylinositol diacylglycerol-lyase) (Phosphatidylinositol-specific phospholipase C) (PI-PLC) identified by match to protein family HMM PF00388 gene gene3553 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1713 BCG9842_B1714 BCG9842_B1714 BCG9842_B1714 3411281 3411850 + putative exported protein gene gene3552 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1714 BCG9842_B1715 BCG9842_B1715 BCG9842_B1715 3409249 3410535 + protein CgeD identified by match to protein family HMM PF00535 gene gene3551 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1715 BCG9842_B1716 BCG9842_B1716 BCG9842_B1716 3408198 3408965 - spore coat polysaccharide biosynthesis protein SpsA identified by match to protein family HMM PF00535 gene gene3550 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1716 BCG9842_B1717 BCG9842_B1717 BCG9842_B1717 3406790 3408193 - spore coat polysaccharide biosynthesis protein SpsB identified by match to protein family HMM PF05159 gene gene3549 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1717 BCG9842_B1718 BCG9842_B1718 BCG9842_B1718 3405551 3406576 - polysaccharide biosynthesis protein CapD identified by match to protein family HMM PF01073%3B match to protein family HMM PF01370%3B match to protein family HMM PF02719%3B match to protein family HMM PF07993 gene gene3548 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1718 BCG9842_B1719 BCG9842_B1719 BCG9842_B1719 3404592 3405554 - NAD-dependent epimerase/dehydratase identified by match to protein family HMM PF01073%3B match to protein family HMM PF01370%3B match to protein family HMM PF02719%3B match to protein family HMM PF04321%3B match to protein family HMM PF07993 gene gene3547 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1719 BCG9842_B1720 BCG9842_B1720 pseC pseC 3403387 3404592 - UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase identified by match to protein family HMM PF01041%3B match to protein family HMM PF01212%3B match to protein family HMM TIGR03588 gene gene3546 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1720 BCG9842_B1721 BCG9842_B1721 BCG9842_B1721 3402391 3403365 - spore coat polysaccharide biosynthesis protein SpsF%2C putative identified by match to protein family HMM PF02348%3B match to protein family HMM PF08666 gene gene3545 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1721 BCG9842_B1722 BCG9842_B1722 pseG pseG 3401251 3402351 - pseudaminic acid biosynthesis-associated protein PseG identified by match to protein family HMM PF04101%3B match to protein family HMM TIGR03590 gene gene3544 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1722 BCG9842_B1723 BCG9842_B1723 pseH pseH 3400689 3401249 - pseudaminic acid biosynthesis N-acetyl transferase identified by match to protein family HMM PF00583%3B match to protein family HMM TIGR03585 gene gene3543 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1723 BCG9842_B1724 BCG9842_B1724 pseI pseI 3399647 3400696 - pseudaminic acid synthase identified by match to protein family HMM PF03102%3B match to protein family HMM PF08666%3B match to protein family HMM TIGR03586 gene gene3542 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1724 BCG9842_B1725 BCG9842_B1725 BCG9842_B1725 3399039 3399185 - hypothetical protein identified by glimmer%3B putative gene gene3541 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1725 BCG9842_B1726 BCG9842_B1726 BCG9842_B1726 3398039 3398551 - cell cycle protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift gene gene3540 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1726 BCG9842_B1727 BCG9842_B1727 BCG9842_B1727 3397878 3398009 - cell cycle protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift gene gene3539 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1727 BCG9842_B1728 BCG9842_B1728 BCG9842_B1728 3396827 3397804 + protein CgeB gene gene3538 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1728 BCG9842_B1729 BCG9842_B1729 BCG9842_B1729 3396550 3396795 + protein CgeA gene gene3537 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1729 BCG9842_B1730 BCG9842_B1730 BCG9842_B1730 3396092 3396325 + protein CgeA gene gene3536 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1730 BCG9842_B1731 BCG9842_B1731 BCG9842_B1731 3393876 3395075 - conserved hypothetical protein identified by match to protein family HMM PF07992 gene gene3535 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1731 BCG9842_B1732 BCG9842_B1732 BCG9842_B1732 3392373 3393809 - hydroxyacylglutathione hydrolase identified by match to protein family HMM PF00581%3B match to protein family HMM PF00753 gene gene3534 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1732 BCG9842_B1733 BCG9842_B1733 BCG9842_B1733 3391816 3392319 + ribosomal-protein-alanine acetyltransferase identified by match to protein family HMM PF00583 gene gene3533 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1733 BCG9842_B1734 BCG9842_B1734 BCG9842_B1734 3391162 3391560 - conserved hypothetical protein gene gene3532 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1734 BCG9842_B1735 BCG9842_B1735 BCG9842_B1735 3389644 3391035 - putative glycolate oxidase%2C subunit GlcD identified by match to protein family HMM PF01565%3B match to protein family HMM PF02913 gene gene3531 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1735 BCG9842_B1736 BCG9842_B1736 BCG9842_B1736 3388662 3389639 - bile acid transporter family protein identified by match to protein family HMM PF01758 gene gene3530 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1736 BCG9842_B1737 BCG9842_B1737 BCG9842_B1737 3388302 3388649 - conserved hypothetical protein gene gene3529 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1737 BCG9842_B1738 BCG9842_B1738 BCG9842_B1738 3387052 3388146 - response regulator aspartate phosphatase identified by match to protein family HMM PF00515%3B match to protein family HMM PF07720 gene gene3528 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1738 BCG9842_B1739 BCG9842_B1739 BCG9842_B1739 3386866 3386997 - conserved hypothetical protein gene gene3527 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1739 BCG9842_B1740 BCG9842_B1740 BCG9842_B1740 3385246 3386712 + conserved hypothetical protein identified by match to protein family HMM PF02696 gene gene3526 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1740 BCG9842_B1741 BCG9842_B1741 BCG9842_B1741 3384069 3385067 + oxidoreductase%2C zinc-binding dehydrogenase family identified by match to protein family HMM PF00107%3B match to protein family HMM PF08240 gene gene3525 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1741 BCG9842_B1742 BCG9842_B1742 BCG9842_B1742 3383706 3384050 + transcriptional regulator%2C ArsR family identified by match to protein family HMM PF01022 gene gene3524 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1742 BCG9842_B1743 BCG9842_B1743 BCG9842_B1743 3383483 3383614 - conserved hypothetical protein gene gene3523 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1743 BCG9842_B1744 BCG9842_B1744 BCG9842_B1744 3381576 3383195 - FAD-binding monooxygenase%2C PheA/TfdB family identified by match to protein family HMM PF01266%3B match to protein family HMM PF01494 gene gene3522 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1744 BCG9842_B1745 BCG9842_B1745 BCG9842_B1745 3380236 3381180 - putative glycerophosphoryl diester phosphodiesterase identified by match to protein family HMM PF03009 gene gene3521 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1745 BCG9842_B1746 BCG9842_B1746 BCG9842_B1746 3379688 3380197 + hypothetical protein identified by glimmer%3B putative gene gene3520 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1746 BCG9842_B1747 BCG9842_B1747 BCG9842_B1747 3378844 3379695 + transcriptional regulator%2C LysR family identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466 gene gene3519 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1747 BCG9842_B1748 BCG9842_B1748 BCG9842_B1748 3377527 3378726 - major facilitator family transporter identified by match to protein family HMM PF07690 gene gene3518 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1748 BCG9842_B1749 BCG9842_B1749 BCG9842_B1749 3377186 3377416 + conserved hypothetical protein gene gene3517 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1749 BCG9842_B1750 BCG9842_B1750 BCG9842_B1750 3375801 3376928 - beta-lactamase identified by match to protein family HMM PF00144 gene gene3516 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1750 BCG9842_B1751 BCG9842_B1751 BCG9842_B1751 3374393 3375550 - agmatine deiminase identified by match to protein family HMM PF04371 gene gene3515 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1751 BCG9842_B1752 BCG9842_B1752 BCG9842_B1752 3373809 3374231 - protein PsiE identified by match to protein family HMM PF06146 gene gene3514 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1752 BCG9842_B1753 BCG9842_B1753 BCG9842_B1753 3372198 3373175 - porphyromonas-type peptidyl-arginine deiminase subfamily identified by match to protein family HMM PF04371 gene gene3513 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1753 BCG9842_B1754 BCG9842_B1754 BCG9842_B1754 3371334 3372107 - transcriptional regulator%2C MerR family identified by match to protein family HMM PF06445 gene gene3512 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1754 BCG9842_B1755 BCG9842_B1755 BCG9842_B1755 3370100 3371146 - agmatine deiminase identified by match to protein family HMM PF04371 gene gene3511 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1755 BCG9842_B1756 BCG9842_B1756 pepF2 pepF2 3368264 3370051 + oligoendopeptidase F identified by match to protein family HMM PF01432%3B match to protein family HMM PF08439%3B match to protein family HMM TIGR00181 gene gene3510 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1756 BCG9842_B1757 BCG9842_B1757 BCG9842_B1757 3367355 3368146 + N-acetyltransferase family protein identified by match to protein family HMM PF00797 gene gene3509 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1757 BCG9842_B1758 BCG9842_B1758 amyS amyS 3365610 3367151 - alpha-amylase identified by match to protein family HMM PF00128 gene gene3508 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1758 BCG9842_B1759 BCG9842_B1759 BCG9842_B1759 3364795 3365508 + collagen triple helix repeat protein gene gene3507 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1759 BCG9842_B1760 BCG9842_B1760 BCG9842_B1760 3362469 3364187 - DNA mismatch repair protein MutS identified by match to protein family HMM PF00488 gene gene3506 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1760 BCG9842_B1761 BCG9842_B1761 BCG9842_B1761 3361925 3362038 - hypothetical protein identified by glimmer%3B putative gene gene3505 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1761 BCG9842_B1762 BCG9842_B1762 BCG9842_B1762 3360105 3361919 - group II intron-encoded protein LtrA identified by match to protein family HMM PF00078%3B match to protein family HMM PF01348 gene gene3504 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1762 BCG9842_B1764 BCG9842_B1764 BCG9842_B1764 3359227 3359751 - acetyltransferase%2C GNAT family identified by match to protein family HMM PF00583 gene gene3503 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1764 BCG9842_B1765 BCG9842_B1765 BCG9842_B1765 3358356 3359066 - putative phosphoglycerate mutase identified by match to protein family HMM PF00300 gene gene3502 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1765 BCG9842_B1766 BCG9842_B1766 BCG9842_B1766 3357323 3358288 + oxidoreductase%2C zinc-binding dehydrogenase family identified by match to protein family HMM PF00107%3B match to protein family HMM PF08240 gene gene3501 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1766 BCG9842_B1767 BCG9842_B1767 BCG9842_B1767 3356306 3357199 - transcriptional regulator%2C LysR family identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466 gene gene3500 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1767 BCG9842_B1768 BCG9842_B1768 BCG9842_B1768 3355494 3356006 - conserved domain protein gene gene3499 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1768 BCG9842_B1769 BCG9842_B1769 BCG9842_B1769 3355000 3355476 - conserved hypothetical protein gene gene3498 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1769 BCG9842_B1770 BCG9842_B1770 BCG9842_B1770 3354398 3354886 + conserved hypothetical protein identified by match to protein family HMM PF05163 gene gene3497 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1770 BCG9842_B1771 BCG9842_B1771 BCG9842_B1771 3353737 3354192 - conserved hypothetical protein gene gene3496 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1771 BCG9842_B1772 BCG9842_B1772 BCG9842_B1772 3352506 3353492 - conserved hypothetical protein gene gene3495 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1772 BCG9842_B1773 BCG9842_B1773 BCG9842_B1773 3351658 3352422 + putative membrane protein identified by match to protein family HMM PF05675 gene gene3494 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1773 BCG9842_B1774 BCG9842_B1774 BCG9842_B1774 3350355 3351389 - iron compound ABC transporter%2C permease protein identified by match to protein family HMM PF01032 gene gene3493 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1774 BCG9842_B1775 BCG9842_B1775 BCG9842_B1775 3349338 3350354 - iron compound ABC transporter%2C permease protein identified by match to protein family HMM PF01032 gene gene3492 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1775 BCG9842_B1776 BCG9842_B1776 BCG9842_B1776 3348408 3349316 - putative iron compound ABC transporter%2C iron compound-binding protein identified by match to protein family HMM PF01497 gene gene3491 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1776 BCG9842_B1777 BCG9842_B1777 BCG9842_B1777 3348206 3348328 - hypothetical protein identified by glimmer%3B putative gene gene3490 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1777 BCG9842_B1778 BCG9842_B1778 BCG9842_B1778 3347637 3348188 - acetyltransferase identified by match to protein family HMM PF00583 gene gene3489 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1778 BCG9842_B1779 BCG9842_B1779 BCG9842_B1779 3347310 3347537 - hypothetical protein identified by glimmer%3B putative gene gene3488 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1779 BCG9842_B1780 BCG9842_B1780 BCG9842_B1780 3345912 3347237 + arsenical pump family protein identified by match to protein family HMM PF00939%3B match to protein family HMM PF02040%3B match to protein family HMM PF03600 gene gene3487 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1780 BCG9842_B1781 BCG9842_B1781 BCG9842_B1781 3345300 3345650 - conserved hypothetical protein identified by match to protein family HMM PF08830 gene gene3486 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1781 BCG9842_B1782 BCG9842_B1782 BCG9842_B1782 3344622 3345284 - conserved hypothetical protein identified by match to protein family HMM PF02585 gene gene3485 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1782 BCG9842_B1783 BCG9842_B1783 BCG9842_B1783 3343768 3344511 + glucose 1-dehydrogenase identified by match to protein family HMM PF00106 gene gene3484 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1783 BCG9842_B1784 BCG9842_B1784 BCG9842_B1784 3342675 3342953 - hypothetical protein identified by glimmer%3B putative gene gene3483 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1784 BCG9842_B1785 BCG9842_B1785 BCG9842_B1785 3342132 3342356 - conserved domain protein gene gene3482 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1785 BCG9842_B1786 BCG9842_B1786 BCG9842_B1786 3341493 3342065 + conserved hypothetical protein gene gene3481 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1786 BCG9842_B1787 BCG9842_B1787 BCG9842_B1787 3339912 3341111 - drug resistance transporter%2C Bcr/CflA family identified by match to protein family HMM PF07690%3B match to protein family HMM TIGR00710 gene gene3480 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1787 BCG9842_B1788 BCG9842_B1788 BCG9842_B1788 3337971 3339362 - amino acid permease family protein identified by match to protein family HMM PF00324 gene gene3479 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1788 BCG9842_B1789 BCG9842_B1789 BCG9842_B1789 3336794 3337813 + alcohol dehydrogenase%2C zinc-containing identified by match to protein family HMM PF00107%3B match to protein family HMM PF08240%3B match to protein family HMM TIGR02817 gene gene3478 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1789 BCG9842_B1790 BCG9842_B1790 BCG9842_B1790 3335853 3336605 - metallo-beta-lactamase family protein identified by match to protein family HMM PF00753 gene gene3477 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1790 BCG9842_B1791 BCG9842_B1791 BCG9842_B1791 3335318 3335812 + hypothetical protein identified by glimmer%3B putative gene gene3476 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1791 BCG9842_B1792 BCG9842_B1792 BCG9842_B1792 3334764 3335228 + putative membrane protein identified by match to protein family HMM PF04657 gene gene3475 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1792 BCG9842_B1793 BCG9842_B1793 BCG9842_B1793 3334328 3334750 + putative membrane protein identified by match to protein family HMM PF04657 gene gene3474 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1793 BCG9842_B1794 BCG9842_B1794 BCG9842_B1794 3333503 3334195 - cyclic nucleotide-binding domain protein identified by match to protein family HMM PF00027 gene gene3473 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1794 BCG9842_B1795 BCG9842_B1795 BCG9842_B1795 3333128 3333487 - glyoxalase/bleomycin resistance protein/dioxygenase gene gene3472 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1795 BCG9842_B1796 BCG9842_B1796 BCG9842_B1796 3331890 3332933 - CzcD accessory protein gene gene3471 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1796 BCG9842_B1797 BCG9842_B1797 BCG9842_B1797 3331312 3331560 - hypothetical protein identified by glimmer%3B putative gene gene3470 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1797 BCG9842_B1798 BCG9842_B1798 BCG9842_B1798 3330238 3331275 + putative penicillin-binding protein identified by match to protein family HMM PF00144 gene gene3469 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1798 BCG9842_B1799 BCG9842_B1799 BCG9842_B1799 3329969 3330097 - hypothetical protein identified by glimmer%3B putative gene gene3468 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1799 BCG9842_B1800 BCG9842_B1800 BCG9842_B1800 3329528 3329809 - conserved hypothetical protein gene gene3467 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1800 BCG9842_B1801 BCG9842_B1801 BCG9842_B1801 3329209 3329499 + conserved hypothetical protein gene gene3466 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1801 BCG9842_B1802 BCG9842_B1802 BCG9842_B1802 3328552 3329028 - beta-lactamase 2 gene gene3465 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1802 BCG9842_B1803 BCG9842_B1803 BCG9842_B1803 3326524 3327834 - prismane protein identified by match to protein family HMM PF03063%3B match to protein family HMM TIGR01703 gene gene3464 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1803 BCG9842_B1804 BCG9842_B1804 BCG9842_B1804 3324342 3325658 - condensation domain protein identified by match to protein family HMM PF00668 gene gene3463 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1804 BCG9842_B1805 BCG9842_B1805 BCG9842_B1805 3323558 3323878 - conserved hypothetical protein identified by match to protein family HMM PF03551 gene gene3462 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1805 BCG9842_B1806 BCG9842_B1806 BCG9842_B1806 3323141 3323482 - conserved hypothetical protein identified by match to protein family HMM PF06304 gene gene3461 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1806 BCG9842_B1807 BCG9842_B1807 BCG9842_B1807 3322224 3322985 - ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005 gene gene3460 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1807 BCG9842_B1808 BCG9842_B1808 BCG9842_B1808 3321474 3322223 - ABC transporter%2C efflux permease protein identified by match to protein family HMM PF01061 gene gene3459 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1808 BCG9842_B1809 BCG9842_B1809 BCG9842_B1809 3320348 3321310 + transcriptional regulator%2C DeoR family identified by match to protein family HMM PF08220%3B match to protein family HMM PF08279 gene gene3458 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1809 BCG9842_B1810 BCG9842_B1810 BCG9842_B1810 3319759 3320244 - conserved domain protein identified by match to protein family HMM PF06445 gene gene3457 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1810 BCG9842_B1811 BCG9842_B1811 BCG9842_B1811 3319356 3319484 - hypothetical protein identified by glimmer%3B putative gene gene3456 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1811 BCG9842_B1812 BCG9842_B1812 BCG9842_B1812 3319116 3319277 + transposase OrfB gene gene3455 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1812 BCG9842_B1813 BCG9842_B1813 sigI sigI 3317985 3318704 - RNA polymerase sigma-I factor identified by match to protein family HMM PF04542%3B match to protein family HMM TIGR02895%3B match to protein family HMM TIGR02937 gene gene3454 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1813 BCG9842_B1814 BCG9842_B1814 BCG9842_B1814 3316706 3317992 - conserved hypothetical protein gene gene3453 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1814 BCG9842_B1815 BCG9842_B1815 BCG9842_B1815 3313154 3316501 - polysaccharide deacetylase/glycosyl transferase%2C group 2 family protein identified by match to protein family HMM PF00535%3B match to protein family HMM PF00704%3B match to protein family HMM PF01522%3B match to protein family HMM PF03142 gene gene3452 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1815 BCG9842_B1816 BCG9842_B1816 BCG9842_B1816 3312676 3312951 - transcriptional regulator%2C ArsR family identified by match to protein family HMM PF01022 gene gene3451 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1816 BCG9842_B1817 BCG9842_B1817 BCG9842_B1817 3311965 3312345 - conserved hypothetical protein gene gene3450 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1817 BCG9842_B1818 BCG9842_B1818 BCG9842_B1818 3310283 3311734 + YhjG identified by match to protein family HMM PF01266%3B match to protein family HMM PF01494 gene gene3449 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1818 BCG9842_B1819 BCG9842_B1819 BCG9842_B1819 3308859 3309182 + conserved hypothetical protein identified by match to protein family HMM PF01638 gene gene3448 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1819 BCG9842_B1820 BCG9842_B1820 BCG9842_B1820 3308201 3308737 - NAD(P)H dehydrogenase%2C quinone family identified by match to protein family HMM PF02525 gene gene3447 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1820 BCG9842_B1821 BCG9842_B1821 BCG9842_B1821 3306564 3308066 - AMP-binding protein identified by match to protein family HMM PF00501 gene gene3446 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1821 BCG9842_B1822 BCG9842_B1822 BCG9842_B1822 3305856 3306419 - acetyltransferase%2C gnat family identified by match to protein family HMM PF00583 gene gene3445 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1822 BCG9842_B1823 BCG9842_B1823 BCG9842_B1823 3304944 3305843 - phenazine biosynthesis protein%2C PhzF family identified by match to protein family HMM PF02567%3B match to protein family HMM TIGR00654 gene gene3444 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1823 BCG9842_B1824 BCG9842_B1824 BCG9842_B1824 3304651 3304860 + hypothetical protein identified by glimmer%3B putative gene gene3443 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1824 BCG9842_B1825 BCG9842_B1825 BCG9842_B1825 3303818 3304567 - SMS protein identified by match to protein family HMM PF01784 gene gene3442 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1825 BCG9842_B1826 BCG9842_B1826 BCG9842_B1826 3302791 3303630 - aminoglycoside phophotransferase-related protein gene gene3441 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1826 BCG9842_B1827 BCG9842_B1827 BCG9842_B1827 3302205 3302762 - conserved hypothetical protein gene gene3440 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1827 BCG9842_B1828 BCG9842_B1828 BCG9842_B1828 3301352 3302176 - metallo-beta-lactamase family protein identified by match to protein family HMM PF00753 gene gene3439 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1828 BCG9842_B1829 BCG9842_B1829 BCG9842_B1829 3300770 3301336 - esterase identified by match to protein family HMM PF00657 gene gene3438 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1829 BCG9842_B1830 BCG9842_B1830 BCG9842_B1830 3299026 3300402 - microbial collagenase identified by match to protein family HMM PF00082 gene gene3437 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1830 BCG9842_B1831 BCG9842_B1831 BCG9842_B1831 3298449 3298865 + XoxI gene gene3436 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1831 BCG9842_B1832 BCG9842_B1832 BCG9842_B1832 3297155 3298216 - oxidoreductase%2C Gfo/Idh/MocA family identified by match to protein family HMM PF01408%3B match to protein family HMM PF02894 gene gene3435 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1832 BCG9842_B1833 BCG9842_B1833 BCG9842_B1833 3296385 3297122 - transcriptional regulator%2C GntR family identified by match to protein family HMM PF00392%3B match to protein family HMM PF07702 gene gene3434 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1833 BCG9842_B1834 BCG9842_B1834 BCG9842_B1834 3295964 3296308 + conserved hypothetical protein identified by match to protein family HMM PF01638 gene gene3433 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1834 BCG9842_B1835 BCG9842_B1835 BCG9842_B1835 3294947 3295342 - conserved hypothetical protein identified by match to protein family HMM PF03960%3B match to protein family HMM TIGR01617 gene gene3432 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1835 BCG9842_B1836 BCG9842_B1836 BCG9842_B1836 3294765 3294899 - conserved hypothetical protein gene gene3431 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1836 BCG9842_B1837 BCG9842_B1837 BCG9842_B1837 3294162 3294575 - rrf2 family protein identified by match to protein family HMM PF02082 gene gene3430 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1837 BCG9842_B1838 BCG9842_B1838 BCG9842_B1838 3293701 3294036 - group-specific protein identified by match to protein family HMM PF08858 gene gene3429 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1838 BCG9842_B1839 BCG9842_B1839 BCG9842_B1839 3292939 3293628 - conserved hypothetical protein gene gene3428 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1839 BCG9842_B1840 BCG9842_B1840 BCG9842_B1840 3290662 3291981 - serine/threonine transporter family protein identified by match to protein family HMM PF01490%3B match to protein family HMM PF03222 gene gene3427 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1840 BCG9842_B1841 BCG9842_B1841 BCG9842_B1841 3289509 3289880 - putative membrane protein identified by match to protein family HMM PF06993 gene gene3426 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1841 BCG9842_B1842 BCG9842_B1842 BCG9842_B1842 3288496 3288972 - conserved hypothetical protein identified by match to protein family HMM PF03928 gene gene3425 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1842 BCG9842_B1843 BCG9842_B1843 zwf zwf 3286589 3288073 - glucose-6-phosphate 1-dehydrogenase identified by match to protein family HMM PF00479%3B match to protein family HMM PF02781%3B match to protein family HMM TIGR00871 gene gene3424 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1843 BCG9842_B1844 BCG9842_B1844 tkt1 tkt1 3284555 3286549 - transketolase identified by match to protein family HMM PF00456%3B match to protein family HMM PF02779%3B match to protein family HMM PF02780%3B match to protein family HMM TIGR00232 gene gene3423 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1844 BCG9842_B1845 BCG9842_B1845 BCG9842_B1845 3283549 3284442 - 6-phosphogluconate dehydrogenase family protein identified by match to protein family HMM PF00393%3B match to protein family HMM PF03446%3B match to protein family HMM PF03807%3B match to protein family HMM TIGR00872 gene gene3422 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1845 BCG9842_B1846 BCG9842_B1846 BCG9842_B1846 3282771 3283439 - putative transaldolase identified by match to protein family HMM PF00923%3B match to protein family HMM TIGR00875 gene gene3421 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1846 BCG9842_B1847 BCG9842_B1847 gntK_1 gntK_1 3280920 3282458 - gluconate kinase identified by match to protein family HMM PF00370%3B match to protein family HMM PF02782%3B match to protein family HMM TIGR01314 gene gene3420 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1847 BCG9842_B1848 BCG9842_B1848 BCG9842_B1848 3279732 3280793 - conserved hypothetical protein gene gene3419 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1848 BCG9842_B1849 BCG9842_B1849 BCG9842_B1849 3279489 3279665 + conserved hypothetical protein identified by match to protein family HMM PF06906 gene gene3418 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1849 BCG9842_B1850 BCG9842_B1850 BCG9842_B1850 3278472 3279293 - pentapeptide repeats domain protein identified by match to protein family HMM PF00805 gene gene3417 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1850 BCG9842_B1851 BCG9842_B1851 BCG9842_B1851 3278108 3278452 - conserved hypothetical protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts gene gene3416 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1851 BCG9842_B1852 BCG9842_B1852 BCG9842_B1852 3277765 3278016 - conserved hypothetical protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts gene gene3415 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1852 BCG9842_B1853 BCG9842_B1853 BCG9842_B1853 3276862 3277746 + transporter%2C EamA family identified by match to protein family HMM PF00892 gene gene3414 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1853 BCG9842_B1854 BCG9842_B1854 BCG9842_B1854 3275992 3276372 - putative transcriptional regulator gene gene3413 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1854 BCG9842_B1855 BCG9842_B1855 BCG9842_B1855 3274544 3275872 - CBS domain protein identified by match to protein family HMM PF00571%3B match to protein family HMM PF01595%3B match to protein family HMM PF03471 gene gene3412 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1855 BCG9842_B1856 BCG9842_B1856 BCG9842_B1856 3274072 3274491 - putative ATP synthase protein I gene gene3411 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1856 BCG9842_B1857 BCG9842_B1857 BCG9842_B1857 3273323 3273871 - conserved hypothetical protein gene gene3410 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1857 BCG9842_B1858 BCG9842_B1858 BCG9842_B1858 3273000 3273227 + hypothetical protein identified by glimmer%3B putative gene gene3409 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1858 BCG9842_B1859 BCG9842_B1859 BCG9842_B1859 3272544 3272945 + group-specific protein gene gene3408 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1859 BCG9842_B1860 BCG9842_B1860 BCG9842_B1860 3271332 3272246 - TPR domain protein identified by match to protein family HMM PF00515%3B match to protein family HMM PF07719 gene gene3407 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1860 BCG9842_B1861 BCG9842_B1861 BCG9842_B1861 3270053 3271249 + putative membrane protein identified by match to protein family HMM PF07690 gene gene3406 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1861 BCG9842_B1862 BCG9842_B1862 BCG9842_B1862 3269398 3269940 - conserved hypothetical protein identified by match to protein family HMM PF07336 gene gene3405 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1862 BCG9842_B1863 BCG9842_B1863 BCG9842_B1863 3269090 3269359 - ubiquinone/menaquinone biosynthesis methyltransferase ubie an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a premature stop gene gene3404 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1863 BCG9842_B1864 BCG9842_B1864 BCG9842_B1864 3268595 3269056 - ubiquinone/menaquinone biosynthesis methyltransferase ubie an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a premature stop gene gene3403 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1864 BCG9842_B1865 BCG9842_B1865 BCG9842_B1865 3265944 3268460 - collagen triple helix repeat domain protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts%3B identified by match to protein family HMM PF01391 gene gene3402 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1865 BCG9842_B1866 BCG9842_B1866 BCG9842_B1866 3263410 3265917 - conserved hypothetical protein identified by match to protein family HMM PF01391 gene gene3401 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1866 BCG9842_B1867 BCG9842_B1867 BCG9842_B1867 3263052 3263195 + hypothetical protein identified by glimmer%3B putative gene gene3400 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1867 BCG9842_B1869 BCG9842_B1869 BCG9842_B1869 3262312 3262767 + ribosomal-protein-alanine acetyltransferase identified by match to protein family HMM PF00583 gene gene3399 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1869 BCG9842_B1870 BCG9842_B1870 BCG9842_B1870 3261854 3262102 - conserved hypothetical protein identified by match to protein family HMM PF04226 gene gene3398 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1870 BCG9842_B1871 BCG9842_B1871 BCG9842_B1871 3260669 3261790 - membrane protein YubA identified by match to protein family HMM PF01594 gene gene3397 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1871 BCG9842_B1872 BCG9842_B1872 dxr1 dxr1 3259483 3260640 + 1-deoxy-D-xylulose 5-phosphate reductoisomerase identified by match to protein family HMM PF02670%3B match to protein family HMM PF08436%3B match to protein family HMM TIGR00243 gene gene3396 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1872 BCG9842_B1873 BCG9842_B1873 BCG9842_B1873 3258094 3259092 - putative tryptophanyl-tRNA synthetase identified by match to protein family HMM PF00579%3B match to protein family HMM TIGR00233 gene gene3395 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1873 BCG9842_B1874 BCG9842_B1874 maa maa 3257322 3257885 - maltose O-acetyltransferase identified by match to protein family HMM PF00132 gene gene3394 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1874 BCG9842_B1875 BCG9842_B1875 BCG9842_B1875 3256057 3257250 - putative membrane protein identified by match to protein family HMM PF07690 gene gene3393 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1875 BCG9842_B1876 BCG9842_B1876 BCG9842_B1876 3254906 3255934 - ROK family protein identified by match to protein family HMM PF00480 gene gene3392 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1876 BCG9842_B1877 BCG9842_B1877 BCG9842_B1877 3254464 3254844 - glyoxylase family protein identified by match to protein family HMM PF00903 gene gene3391 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1877 BCG9842_B1878 BCG9842_B1878 BCG9842_B1878 3254119 3254373 - conserved hypothetical protein gene gene3390 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1878 BCG9842_B1879 BCG9842_B1879 BCG9842_B1879 3253577 3254026 + mutT/nudix family protein identified by match to protein family HMM PF00293 gene gene3389 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1879 BCG9842_B1880 BCG9842_B1880 BCG9842_B1880 3252720 3253559 + conserved hypothetical protein gene gene3388 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1880 BCG9842_B1881 BCG9842_B1881 BCG9842_B1881 3251874 3252596 - acetyltransferase%2C GNAT family identified by match to protein family HMM PF00583 gene gene3387 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1881 BCG9842_B1882 BCG9842_B1882 BCG9842_B1882 3250589 3251608 - protein-tyrosine phosphatase-like protein gene gene3386 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1882 BCG9842_B1883 BCG9842_B1883 BCG9842_B1883 3249870 3250328 - group-specific protein gene gene3385 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1883 BCG9842_B1884 BCG9842_B1884 BCG9842_B1884 3249053 3249763 - hydrolase%2C haloacid dehalogenase-like family identified by match to protein family HMM PF00702%3B match to protein family HMM TIGR01549%3B match to protein family HMM TIGR02254 gene gene3384 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1884 BCG9842_B1885 BCG9842_B1885 BCG9842_B1885 3247858 3248823 - conserved domain protein gene gene3383 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1885 BCG9842_B1886 BCG9842_B1886 BCG9842_B1886 3247607 3247810 + DNA-binding protein identified by match to protein family HMM PF01381 gene gene3382 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1886 BCG9842_B1887 BCG9842_B1887 BCG9842_B1887 3247260 3247619 + hypothetical protein identified by glimmer%3B putative gene gene3381 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1887 BCG9842_B1888 BCG9842_B1888 BCG9842_B1888 3246886 3247080 - hypothetical protein identified by glimmer%3B putative gene gene3380 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1888 BCG9842_B1889 BCG9842_B1889 BCG9842_B1889 3246072 3246797 - ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005 gene gene3379 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1889 BCG9842_B1890 BCG9842_B1890 BCG9842_B1890 3244421 3246079 - conserved hypothetical protein gene gene3378 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1890 BCG9842_B1891 BCG9842_B1891 BCG9842_B1891 3243605 3244378 - oxidoreductase%2C short-chain dehydrogenase/reductase family identified by match to protein family HMM PF00106 gene gene3377 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1891 BCG9842_B1892 BCG9842_B1892 BCG9842_B1892 3243264 3243404 - hypothetical protein identified by glimmer%3B putative gene gene3376 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1892 BCG9842_B1893 BCG9842_B1893 BCG9842_B1893 3242545 3243267 - putative lipoprotein gene gene3375 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1893 BCG9842_B1894 BCG9842_B1894 BCG9842_B1894 3241544 3242482 + conserved hypothetical protein gene gene3374 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1894 BCG9842_B1895 BCG9842_B1895 BCG9842_B1895 3240996 3241472 + conserved hypothetical protein gene gene3373 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1895 BCG9842_B1896 BCG9842_B1896 pykA1 pykA1 3239655 3240713 - pyruvate kinase identified by match to protein family HMM PF00224%3B match to protein family HMM TIGR01064 gene gene3372 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1896 BCG9842_B1897 BCG9842_B1897 BCG9842_B1897 3239341 3239616 + conserved hypothetical protein gene gene3371 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1897 BCG9842_B1898 BCG9842_B1898 BCG9842_B1898 3238497 3239180 + nitroreductase family protein identified by match to protein family HMM PF00881 gene gene3370 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1898 BCG9842_B1899 BCG9842_B1899 BCG9842_B1899 3237988 3238368 - conserved hypothetical protein identified by match to protein family HMM PF01638 gene gene3369 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1899 BCG9842_B1900 BCG9842_B1900 BCG9842_B1900 3237226 3237825 + hypothetical protein identified by glimmer%3B putative gene gene3368 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1900 BCG9842_B1901 BCG9842_B1901 BCG9842_B1901 3236692 3237003 + putative membrane protein gene gene3367 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1901 BCG9842_B1902 BCG9842_B1902 hisS1 hisS1 3235252 3236529 + histidyl-tRNA synthetase identified by match to protein family HMM PF00587%3B match to protein family HMM PF03129%3B match to protein family HMM TIGR00442 gene gene3366 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1902 BCG9842_B1903 BCG9842_B1903 BCG9842_B1903 3234435 3234911 - ybaK/ebsC family protein identified by match to protein family HMM PF04073%3B match to protein family HMM TIGR00011 gene gene3365 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1903 BCG9842_B1905 BCG9842_B1905 BCG9842_B1905 3233032 3233910 - purine or other phosphorylase family 1 an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF01048 gene gene3364 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1905 BCG9842_B1906 BCG9842_B1906 BCG9842_B1906 3232465 3232821 - hypothetical protein identified by glimmer%3B putative gene gene3363 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1906 BCG9842_B1907 BCG9842_B1907 BCG9842_B1907 3231138 3231965 - ribonuclease identified by match to protein family HMM PF04231 gene gene3362 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1907 BCG9842_B1908 BCG9842_B1908 BCG9842_B1908 3229561 3230991 + putative transporter identified by match to protein family HMM PF03553%3B match to protein family HMM PF03606%3B match to protein family HMM PF03806 gene gene3361 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1908 BCG9842_B1909 BCG9842_B1909 BCG9842_B1909 3228882 3229361 - protein of unknown function identified by match to protein family HMM PF03737%3B match to protein family HMM TIGR01935 gene gene3360 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1909 BCG9842_B1910 BCG9842_B1910 BCG9842_B1910 3227622 3228542 - lpxtg-motif cell wall anchor domain protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift gene gene3359 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1910 BCG9842_B1911 BCG9842_B1911 BCG9842_B1911 3226679 3227611 - lpxtg-motif cell wall anchor domain protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM TIGR01167 gene gene3358 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1911 BCG9842_B1912 BCG9842_B1912 BCG9842_B1912 3225773 3226621 - putative lipoprotein gene gene3357 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1912 BCG9842_B1913 BCG9842_B1913 BCG9842_B1913 3224872 3225678 - ABC transporter%2C permease protein identified by match to protein family HMM PF02361 gene gene3356 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1913 BCG9842_B1914 BCG9842_B1914 BCG9842_B1914 3223238 3224893 - ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005 gene gene3355 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1914 BCG9842_B1915 BCG9842_B1915 BCG9842_B1915 3222564 3223172 - putative membrane protein gene gene3354 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1915 BCG9842_B1916 BCG9842_B1916 BCG9842_B1916 3221659 3222381 - putative membrane protein gene gene3353 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1916 BCG9842_B1917 BCG9842_B1917 BCG9842_B1917 3221437 3221628 + conserved domain protein gene gene3352 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1917 BCG9842_B1919 BCG9842_B1919 BCG9842_B1919 3220849 3221106 - conserved hypothetical protein gene gene3351 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1919 BCG9842_B1920 BCG9842_B1920 BCG9842_B1920 3220197 3220586 - conserved hypothetical protein identified by match to protein family HMM PF04434 gene gene3350 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1920 BCG9842_B1921 BCG9842_B1921 BCG9842_B1921 3219598 3220173 - NAD(P)H dehydrogenase%2C quinone family identified by match to protein family HMM PF02525%3B match to protein family HMM PF03358 gene gene3349 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1921 BCG9842_B1922 BCG9842_B1922 BCG9842_B1922 3219248 3219601 - hypothetical protein identified by glimmer%3B putative gene gene3348 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1922 BCG9842_B1923 BCG9842_B1923 BCG9842_B1923 3217591 3218958 - short-chain fatty acids transporter identified by match to protein family HMM PF02667%3B match to protein family HMM PF03806 gene gene3347 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1923 BCG9842_B1924 BCG9842_B1924 BCG9842_B1924 3217517 3217636 - hypothetical protein identified by glimmer%3B putative gene gene3346 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1924 BCG9842_B1925 BCG9842_B1925 BCG9842_B1925 3216973 3217113 - hypothetical protein identified by glimmer%3B putative gene gene3345 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1925 BCG9842_B1926 BCG9842_B1926 BCG9842_B1926 3215594 3216853 + putative 6-aminohexanoate-dimer hydrolase identified by match to protein family HMM PF00144 gene gene3344 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1926 BCG9842_B1927 BCG9842_B1927 BCG9842_B1927 3214294 3215493 + major facilitator family transporter identified by match to protein family HMM PF00083%3B match to protein family HMM PF07690 gene gene3343 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1927 BCG9842_B1928 BCG9842_B1928 BCG9842_B1928 3213862 3214278 + transcriptional regulator%2C MarR family identified by match to protein family HMM PF01047 gene gene3342 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1928 BCG9842_B1929 BCG9842_B1929 BCG9842_B1929 3212770 3213672 - 3-Oxoadipate enol-lactonase identified by match to protein family HMM PF00561 gene gene3341 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1929 BCG9842_B1930 BCG9842_B1930 BCG9842_B1930 3212481 3212708 - conserved hypothetical protein gene gene3340 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1930 BCG9842_B1931 BCG9842_B1931 BCG9842_B1931 3211167 3212363 - major facilitator family transporter identified by match to protein family HMM PF07690 gene gene3339 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1931 BCG9842_B1932 BCG9842_B1932 BCG9842_B1932 3210983 3211183 - conserved hypothetical protein gene gene3338 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1932 BCG9842_B1933 BCG9842_B1933 BCG9842_B1933 3209139 3210374 - capsule biosynthesis protein CapA identified by match to protein family HMM PF09587 gene gene3337 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1933 BCG9842_B1934 BCG9842_B1934 BCG9842_B1934 3208359 3209078 - D-alanyl-D-alanine carboxypeptidase identified by match to protein family HMM PF02557 gene gene3336 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1934 BCG9842_B1935 BCG9842_B1935 BCG9842_B1935 3207291 3207713 - conserved hypothetical protein gene gene3335 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1935 BCG9842_B1936 BCG9842_B1936 BCG9842_B1936 3206959 3207264 - conserved hypothetical protein gene gene3334 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1936 BCG9842_B1937 BCG9842_B1937 BCG9842_B1937 3206217 3206936 - conserved hypothetical protein gene gene3333 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1937 BCG9842_B1938 BCG9842_B1938 BCG9842_B1938 3205891 3206217 - conserved hypothetical protein gene gene3332 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1938 BCG9842_B1939 BCG9842_B1939 BCG9842_B1939 3204157 3205857 - hypothetical Membrane Spanning Protein gene gene3331 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1939 BCG9842_B1940 BCG9842_B1940 BCG9842_B1940 3203666 3204160 - conserved hypothetical protein gene gene3330 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1940 BCG9842_B1941 BCG9842_B1941 BCG9842_B1941 3202294 3203079 - putative site-specific recombinase%2C resolvase family identified by match to protein family HMM PF00239 gene gene3329 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1941 BCG9842_B1942 BCG9842_B1942 BCG9842_B1942 3200902 3202137 - transposase%2C IS110 family%2C OrfB identified by match to protein family HMM PF01548%3B match to protein family HMM PF02371 gene gene3328 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1942 BCG9842_B1943 BCG9842_B1943 BCG9842_B1943 3200317 3200637 - YeeE an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts gene gene3327 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1943 BCG9842_B1944 BCG9842_B1944 BCG9842_B1944 3199818 3200309 - conserved hypothetical protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts%3B identified by match to protein family HMM PF04634%3B match to protein family HMM TIGR01741 gene gene3326 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1944 BCG9842_B1945 BCG9842_B1945 BCG9842_B1945 3198867 3199502 - YeeF gene gene3325 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1945 BCG9842_B1946 BCG9842_B1946 BCG9842_B1946 3198392 3198874 - conserved hypothetical protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF04634%3B match to protein family HMM TIGR01741 gene gene3324 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1946 BCG9842_B1947 BCG9842_B1947 BCG9842_B1947 3198160 3198276 - hypothetical protein identified by glimmer%3B putative gene gene3323 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1947 BCG9842_B1948 BCG9842_B1948 BCG9842_B1948 3197757 3197933 - hypothetical Membrane Spanning Protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift gene gene3322 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1948 BCG9842_B1949 BCG9842_B1949 BCG9842_B1949 3197362 3197757 - hypothetical Cytosolic Protein gene gene3321 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1949 BCG9842_B1950 BCG9842_B1950 BCG9842_B1950 3196906 3197346 - SMI1 / KNR4 family identified by match to protein family HMM PF09346 gene gene3320 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1950 BCG9842_B1951 BCG9842_B1951 BCG9842_B1951 3195632 3195886 + protein _3043 gene gene3318 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1951 BCG9842_B1952 BCG9842_B1952 BCG9842_B1952 3195883 3196365 - hypothetical Membrane Spanning Protein gene gene3319 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1952 BCG9842_B1953 BCG9842_B1953 BCG9842_B1953 3194986 3195318 - group-specific protein gene gene3317 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1953 BCG9842_B1954 BCG9842_B1954 BCG9842_B1954 3194513 3194749 - conserved hypothetical protein gene gene3316 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1954 BCG9842_B1955 BCG9842_B1955 BCG9842_B1955 3193675 3194292 + hypothetical Cytosolic Protein gene gene3315 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1955 BCG9842_B1956 BCG9842_B1956 BCG9842_B1956 3192719 3193015 - hypothetical protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by glimmer%3B putative gene gene3314 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1956 BCG9842_B1957 BCG9842_B1957 BCG9842_B1957 3191799 3192623 - hypothetical Membrane Spanning Protein gene gene3313 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1957 BCG9842_B1958 BCG9842_B1958 BCG9842_B1958 3191406 3191549 - conserved hypothetical protein gene gene3312 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1958 BCG9842_B1959 BCG9842_B1959 BCG9842_B1959 3191063 3191302 - conserved hypothetical protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a premature stop gene gene3311 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1959 BCG9842_B1960 BCG9842_B1960 BCG9842_B1960 3190811 3191035 - conserved hypothetical protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a premature stop gene gene3310 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1960 BCG9842_B1961 BCG9842_B1961 BCG9842_B1961 3190072 3190752 - group-specific protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift gene gene3309 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1961 BCG9842_B1962 BCG9842_B1962 BCG9842_B1962 3189357 3189911 - hypothetical protein identified by glimmer%3B putative gene gene3308 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1962 BCG9842_B1963 BCG9842_B1963 BCG9842_B1963 3188700 3189251 - conserved hypothetical protein gene gene3307 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1963 BCG9842_B1964 BCG9842_B1964 BCG9842_B1964 3188343 3188693 - conserved hypothetical protein gene gene3306 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1964 BCG9842_B1965 BCG9842_B1965 BCG9842_B1965 3187921 3188127 - conserved hypothetical protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift gene gene3305 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1965 BCG9842_B1966 BCG9842_B1966 BCG9842_B1966 3187743 3187955 - conserved hypothetical protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift gene gene3304 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1966 BCG9842_B1967 BCG9842_B1967 BCG9842_B1967 3187316 3187678 - conserved hypothetical protein gene gene3303 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1967 BCG9842_B1968 BCG9842_B1968 BCG9842_B1968 3186716 3187081 - hypothetical Cytosolic Protein gene gene3302 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1968 BCG9842_B1969 BCG9842_B1969 BCG9842_B1969 3185932 3186639 + conserved hypothetical protein identified by match to protein family HMM PF06352 gene gene3301 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1969 BCG9842_B1970 BCG9842_B1970 BCG9842_B1970 3185240 3185728 - conserved hypothetical protein identified by match to protein family HMM PF04634%3B match to protein family HMM TIGR01741 gene gene3300 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1970 BCG9842_B1971 BCG9842_B1971 BCG9842_B1971 3184762 3185136 - conserved hypothetical protein gene gene3299 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1971 BCG9842_B1972 BCG9842_B1972 BCG9842_B1972 3184296 3184634 - conserved hypothetical protein gene gene3298 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1972 BCG9842_B1973 BCG9842_B1973 BCG9842_B1973 3183865 3184194 - conserved hypothetical protein gene gene3297 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1973 BCG9842_B1974 BCG9842_B1974 BCG9842_B1974 3182852 3183808 - hypothetical Membrane Spanning Protein gene gene3296 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1974 BCG9842_B1975 BCG9842_B1975 BCG9842_B1975 3182238 3182696 - group-specific protein gene gene3295 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1975 BCG9842_B1976 BCG9842_B1976 BCG9842_B1976 3180843 3182093 + permease%2C major facilitator superfamily identified by match to protein family HMM PF07690 gene gene3294 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1976 BCG9842_B1977 BCG9842_B1977 BCG9842_B1977 3180039 3180620 - transcriptional regulator%2C TetR family identified by match to protein family HMM PF00440 gene gene3293 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1977 BCG9842_B1978 BCG9842_B1978 BCG9842_B1978 3179751 3179882 + conserved hypothetical protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a premature stop gene gene3292 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1978 BCG9842_B1979 BCG9842_B1979 BCG9842_B1979 3177620 3179419 - N-acetylmuramoyl-L-alanine amidase identified by match to protein family HMM PF00395%3B match to protein family HMM PF01510%3B match to protein family HMM PF08239 gene gene3291 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1979 BCG9842_B1980 BCG9842_B1980 BCG9842_B1980 3176394 3177170 - phage protein identified by match to protein family HMM PF04271%3B match to protein family HMM TIGR01446 gene gene3290 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1980 BCG9842_B1981 BCG9842_B1981 BCG9842_B1981 3172869 3176282 - molybdate metabolism regulator gene gene3289 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1981 BCG9842_B1982 BCG9842_B1982 BCG9842_B1982 3170376 3172766 - beta-lactam antibiotic acylase family protein identified by match to protein family HMM PF01804 gene gene3288 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1982 BCG9842_B1983 BCG9842_B1983 BCG9842_B1983 3170144 3170263 + hypothetical protein identified by glimmer%3B putative gene gene3287 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1983 BCG9842_B1984 BCG9842_B1984 BCG9842_B1984 3168996 3169823 - transcriptional regulator%2C AraC family identified by match to protein family HMM PF00165 gene gene3286 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1984 BCG9842_B1985 BCG9842_B1985 BCG9842_B1985 3168463 3168714 - cupin domain protein identified by match to protein family HMM PF07883 gene gene3285 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1985 BCG9842_B1986 BCG9842_B1986 BCG9842_B1986 3167194 3168261 - conserved hypothetical protein gene gene3284 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1986 BCG9842_B1987 BCG9842_B1987 BCG9842_B1987 3166913 3167104 - conserved hypothetical protein gene gene3283 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1987 BCG9842_B1988 BCG9842_B1988 serC serC 3165623 3166705 - phosphoserine aminotransferase identified by match to protein family HMM PF00266%3B match to protein family HMM TIGR01364 gene gene3282 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1988 BCG9842_B1989 BCG9842_B1989 BCG9842_B1989 3164438 3165610 - putative D-3-phosphoglycerate dehydrogenase identified by match to protein family HMM PF00389%3B match to protein family HMM PF01842%3B match to protein family HMM PF02826 gene gene3281 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1989 BCG9842_B1990 BCG9842_B1990 BCG9842_B1990 3163177 3164424 - conserved hypothetical protein identified by match to protein family HMM PF06245 gene gene3280 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1990 BCG9842_B1991 BCG9842_B1991 BCG9842_B1991 3162871 3163089 - MaoC family protein gene gene3279 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1991 BCG9842_B1992 BCG9842_B1992 BCG9842_B1992 3162384 3162827 + conserved hypothetical protein gene gene3278 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1992 BCG9842_B1993 BCG9842_B1993 BCG9842_B1993 3161325 3162356 + microcin C7 self-immunity protein MccF identified by match to protein family HMM PF02016 gene gene3277 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1993 BCG9842_B1994 BCG9842_B1994 BCG9842_B1994 3161194 3161331 + hypothetical protein identified by glimmer%3B putative gene gene3276 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1994 BCG9842_B1995 BCG9842_B1995 BCG9842_B1995 3160412 3161053 - hypothetical protein identified by glimmer%3B putative gene gene3275 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1995 BCG9842_B1996 BCG9842_B1996 BCG9842_B1996 3159241 3160080 - putative membrane protein identified by match to protein family HMM PF02588 gene gene3274 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1996 BCG9842_B1997 BCG9842_B1997 paiB1 paiB1 3158404 3159027 + protease synthase and sporulation negative regulatory protein PAI 2 identified by match to protein family HMM PF04299 gene gene3273 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1997 BCG9842_B1998 BCG9842_B1998 BCG9842_B1998 3157862 3158380 + protease synthase and sporulation negative regulatory protein PAI 1 identified by match to protein family HMM PF00583 gene gene3272 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1998 BCG9842_B1999 BCG9842_B1999 BCG9842_B1999 3157384 3157836 + transcriptional regulator%2C MarR family identified by match to protein family HMM PF01047 gene gene3271 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B1999 BCG9842_B2000 BCG9842_B2000 BCG9842_B2000 3156604 3157269 - putative membrane protein identified by match to protein family HMM PF02588 gene gene3270 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2000 BCG9842_B2001 BCG9842_B2001 BCG9842_B2001 3155765 3156442 - DNA-binding response regulator identified by match to protein family HMM PF00072%3B match to protein family HMM PF00486 gene gene3269 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2001 BCG9842_B2002 BCG9842_B2002 BCG9842_B2002 3154387 3155763 - sensor histidine kinase identified by match to protein family HMM PF00512%3B match to protein family HMM PF00672%3B match to protein family HMM PF02518 gene gene3268 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2002 BCG9842_B2003 BCG9842_B2003 BCG9842_B2003 3152996 3154060 - putative ABC transporter%2C permease protein identified by match to protein family HMM PF02687 gene gene3267 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2003 BCG9842_B2004 BCG9842_B2004 BCG9842_B2004 3152325 3152996 - ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005 gene gene3266 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2004 BCG9842_B2005 BCG9842_B2005 BCG9842_B2005 3151171 3152274 + LPXTG-motif cell wall anchor domain protein identified by match to protein family HMM PF00746%3B match to protein family HMM TIGR01167 gene gene3265 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2005 BCG9842_B2006 BCG9842_B2006 BCG9842_B2006 3150439 3151020 + conserved hypothetical protein gene gene3264 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2006 BCG9842_B2007 BCG9842_B2007 BCG9842_B2007 3149303 3150223 - conserved hypothetical protein identified by match to protein family HMM PF02409%3B match to protein family HMM TIGR00027 gene gene3263 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2007 BCG9842_B2008 BCG9842_B2008 BCG9842_B2008 3148182 3148940 - conserved hypothetical protein identified by match to protein family HMM PF06161 gene gene3262 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2008 BCG9842_B2009 BCG9842_B2009 BCG9842_B2009 3147597 3148010 - conserved hypothetical protein gene gene3261 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2009 BCG9842_B2010 BCG9842_B2010 BCG9842_B2010 3146062 3147294 - conserved hypothetical protein identified by match to protein family HMM PF00149 gene gene3260 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2010 BCG9842_B2011 BCG9842_B2011 BCG9842_B2011 3144709 3145704 - putative pyridoxal phosphate-dependent deaminase identified by match to protein family HMM PF00291%3B match to protein family HMM TIGR01275 gene gene3259 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2011 BCG9842_B2012 BCG9842_B2012 BCG9842_B2012 3143897 3144451 - conserved hypothetical protein gene gene3258 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2012 BCG9842_B2013 BCG9842_B2013 BCG9842_B2013 3143170 3143766 + hypothetical protein identified by glimmer%3B putative gene gene3257 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2013 BCG9842_B2014 BCG9842_B2014 BCG9842_B2014 3141296 3142837 - drug resistance transporter%2C EmrB/QacA family identified by match to protein family HMM PF07690%3B match to protein family HMM TIGR00711 gene gene3256 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2014 BCG9842_B2015 BCG9842_B2015 BCG9842_B2015 3141165 3141281 + hypothetical protein identified by glimmer%3B putative gene gene3255 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2015 BCG9842_B2016 BCG9842_B2016 cypD cypD 3137514 3140711 - bifunctional P-450:NADPH-P450 reductase 1 identified by match to protein family HMM PF00067%3B match to protein family HMM PF00175%3B match to protein family HMM PF00258%3B match to protein family HMM PF00667 gene gene3254 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2016 BCG9842_B2017 BCG9842_B2017 BCG9842_B2017 3135191 3137302 + hypothetical Cytosolic Protein gene gene3253 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2017 BCG9842_B2018 BCG9842_B2018 BCG9842_B2018 3134405 3134518 - hypothetical protein identified by glimmer%3B putative gene gene3252 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2018 BCG9842_B2019 BCG9842_B2019 BCG9842_B2019 3134089 3134448 - conserved hypothetical protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift gene gene3251 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2019 BCG9842_B2020 BCG9842_B2020 BCG9842_B2020 3132823 3133782 - beta-lactamase identified by match to protein family HMM PF00144%3B match to protein family HMM PF00905 gene gene3250 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2020 BCG9842_B2021 BCG9842_B2021 BCG9842_B2021 3131946 3132632 - regulatory protein VanR identified by match to protein family HMM PF00072%3B match to protein family HMM PF00486 gene gene3249 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2021 BCG9842_B2022 BCG9842_B2022 BCG9842_B2022 3130873 3131949 - two-component sensor histidine kinase identified by match to protein family HMM PF00512%3B match to protein family HMM PF00672%3B match to protein family HMM PF02518 gene gene3248 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2022 BCG9842_B2023 BCG9842_B2023 BCG9842_B2023 3129864 3130625 - ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005 gene gene3247 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2023 BCG9842_B2024 BCG9842_B2024 BCG9842_B2024 3128018 3129847 - ABC transporter%2C permease component identified by match to protein family HMM PF02687 gene gene3246 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2024 BCG9842_B2025 BCG9842_B2025 BCG9842_B2025 3126104 3127450 - FAD-binding protein identified by match to protein family HMM PF01565%3B match to protein family HMM PF08031 gene gene3245 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2025 BCG9842_B2026 BCG9842_B2026 BCG9842_B2026 3123605 3125392 + Two-component protein Kinase identified by match to protein family HMM PF00072%3B match to protein family HMM PF00196%3B match to protein family HMM PF02518%3B match to protein family HMM PF07730 gene gene3244 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2026 BCG9842_B2027 BCG9842_B2027 BCG9842_B2027 3122911 3123489 + conserved hypothetical protein gene gene3243 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2027 BCG9842_B2028 BCG9842_B2028 BCG9842_B2028 3121215 3122552 + succinoglycan biosynthesis protein identified by match to protein family HMM PF05139 gene gene3242 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2028 BCG9842_B2029 BCG9842_B2029 BCG9842_B2029 3119971 3120855 - caax amino protease family identified by match to protein family HMM PF02517 gene gene3241 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2029 BCG9842_B2030 BCG9842_B2030 BCG9842_B2030 3117887 3119332 - conserved hypothetical protein gene gene3240 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2030 BCG9842_B2031 BCG9842_B2031 BCG9842_B2031 3117325 3117540 - hypothetical protein identified by glimmer%3B putative gene gene3239 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2031 BCG9842_B2032 BCG9842_B2032 BCG9842_B2032 3115823 3117133 + sensor histidine kinase identified by match to protein family HMM PF00512%3B match to protein family HMM PF00672%3B match to protein family HMM PF02518 gene gene3238 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2032 BCG9842_B2033 BCG9842_B2033 BCG9842_B2033 3115089 3115763 + DNA-binding response regulator identified by match to protein family HMM PF00072%3B match to protein family HMM PF00486 gene gene3237 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2033 BCG9842_B2034 BCG9842_B2034 BCG9842_B2034 3114347 3114817 - putative lipoprotein gene gene3236 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2034 BCG9842_B2035 BCG9842_B2035 BCG9842_B2035 3114003 3114326 - conserved domain protein identified by match to protein family HMM PF03413 gene gene3235 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2035 BCG9842_B2036 BCG9842_B2036 BCG9842_B2036 3110913 3112988 - putative penicillin-binding protein identified by match to protein family HMM PF00144 gene gene3234 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2036 BCG9842_B2037 BCG9842_B2037 BCG9842_B2037 3110281 3110604 + conserved domain protein gene gene3233 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2037 BCG9842_B2038 BCG9842_B2038 BCG9842_B2038 3109753 3110145 + glyoxylase family protein identified by match to protein family HMM PF00903 gene gene3232 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2038 BCG9842_B2039 BCG9842_B2039 BCG9842_B2039 3107332 3109611 - conserved domain protein gene gene3231 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2039 BCG9842_B2041 BCG9842_B2041 BCG9842_B2041 3105861 3107066 - N-acyl-L-amino acid amidohydrolase identified by match to protein family HMM PF01546%3B match to protein family HMM PF07687%3B match to protein family HMM TIGR01891 gene gene3230 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2041 BCG9842_B2042 BCG9842_B2042 BCG9842_B2042 3105252 3105692 + transcriptional regulator%2C AsnC family identified by match to protein family HMM PF01037 gene gene3229 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2042 BCG9842_B2043 BCG9842_B2043 BCG9842_B2043 3104320 3105084 - oxidoreductase%2C short-chain dehydrogenase/reductase family identified by match to protein family HMM PF00106%3B match to protein family HMM PF08659 gene gene3228 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2043 BCG9842_B2044 BCG9842_B2044 BCG9842_B2044 3103378 3103944 - transcriptional regulator%2C TetR family identified by match to protein family HMM PF00440 gene gene3227 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2044 BCG9842_B2045 BCG9842_B2045 BCG9842_B2045 3101463 3103319 - mxaA domain protein identified by match to protein family HMM PF01073%3B match to protein family HMM PF01370%3B match to protein family HMM PF07993 gene gene3226 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2045 BCG9842_B2046 BCG9842_B2046 BCG9842_B2046 3098929 3101025 - hypothetical protein identified by glimmer%3B putative gene gene3225 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2046 BCG9842_B2047 BCG9842_B2047 BCG9842_B2047 3097773 3098426 - transposase for transposon gene gene3224 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2047 BCG9842_B2048 BCG9842_B2048 BCG9842_B2048 3097249 3097467 - conserved hypothetical protein gene gene3223 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2048 BCG9842_B2049 BCG9842_B2049 BCG9842_B2049 3095706 3097136 - transposase for insertion sequence element D identified by match to protein family HMM PF01609 gene gene3222 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2049 BCG9842_B2050 BCG9842_B2050 BCG9842_B2050 3094538 3095047 - conserved hypothetical protein gene gene3221 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2050 BCG9842_B2051 BCG9842_B2051 BCG9842_B2051 3092902 3094332 + transposase for insertion sequence element D identified by match to protein family HMM PF01609 gene gene3220 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2051 BCG9842_B2052 BCG9842_B2052 BCG9842_B2052 3092156 3092323 - glyoxalase I gene gene3219 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2052 BCG9842_B2053 BCG9842_B2053 BCG9842_B2053 3091048 3091956 + integral membrane protein DUF6 identified by match to protein family HMM PF00892 gene gene3218 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2053 BCG9842_B2054 BCG9842_B2054 BCG9842_B2054 3089699 3090925 + major facilitator identified by match to protein family HMM PF07690 gene gene3217 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2054 BCG9842_B2055 BCG9842_B2055 BCG9842_B2055 3089608 3089730 - hypothetical protein identified by glimmer%3B putative gene gene3216 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2055 BCG9842_B2056 BCG9842_B2056 BCG9842_B2056 3088730 3089587 - HTH-type transcriptional regulator GltR identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466 gene gene3215 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2056 BCG9842_B2057 BCG9842_B2057 BCG9842_B2057 3087885 3088457 - thiJ/pfpI family protein identified by match to protein family HMM PF01965 gene gene3214 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2057 BCG9842_B2058 BCG9842_B2058 BCG9842_B2058 3087568 3087714 - conserved hypothetical protein gene gene3213 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2058 BCG9842_B2059 BCG9842_B2059 arsR arsR 3086988 3087293 - arsenical resistance operon repressor identified by match to protein family HMM PF01022 gene gene3212 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2059 BCG9842_B2060 BCG9842_B2060 BCG9842_B2060 3086490 3086927 - glyoxalase family protein identified by match to protein family HMM PF00903 gene gene3211 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2060 BCG9842_B2061 BCG9842_B2061 acr3 acr3 3085431 3086471 - arsenical-resistance protein identified by match to protein family HMM PF01758%3B match to protein family HMM TIGR00832 gene gene3210 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2061 BCG9842_B2062 BCG9842_B2062 arsC arsC 3085001 3085405 - arsenate reductase (thioredoxin) identified by match to protein family HMM PF01451%3B match to protein family HMM TIGR02691 gene gene3209 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2062 BCG9842_B2063 BCG9842_B2063 BCG9842_B2063 3084674 3084853 - acetyltransferase%2C gnat family gene gene3208 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2063 BCG9842_B2064 BCG9842_B2064 BCG9842_B2064 3084078 3084677 - thiJ/pfpI family protein identified by match to protein family HMM PF01965 gene gene3207 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2064 BCG9842_B2065 BCG9842_B2065 BCG9842_B2065 3082960 3083709 - metal ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005 gene gene3206 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2065 BCG9842_B2066 BCG9842_B2066 BCG9842_B2066 3082097 3082963 - metal ABC transporter%2C permease protein identified by match to protein family HMM PF00950 gene gene3205 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2066 BCG9842_B2067 BCG9842_B2067 BCG9842_B2067 3081144 3082079 - manganese ABC transporter substrate-binding lipoprotein identified by match to protein family HMM PF01297 gene gene3204 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2067 BCG9842_B2068 BCG9842_B2068 BCG9842_B2068 3079861 3080772 - putative 1%2C4-dihydroxy-2-naphthoate octaprenyltransferase identified by match to protein family HMM PF01040%3B match to protein family HMM TIGR00751 gene gene3203 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2068 BCG9842_B2069 BCG9842_B2069 BCG9842_B2069 3079205 3079762 + putative streptothricin acetyltransferase identified by match to protein family HMM PF00583 gene gene3202 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2069 BCG9842_B2070 BCG9842_B2070 BCG9842_B2070 3077967 3078809 - peptidoglycan N-acetylglucosamine deacetylase identified by match to protein family HMM PF01522 gene gene3201 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2070 BCG9842_B2071 BCG9842_B2071 BCG9842_B2071 3077249 3077611 - conserved hypothetical protein gene gene3200 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2071 BCG9842_B2072 BCG9842_B2072 BCG9842_B2072 3075110 3076642 - NADH dehydrogenase (quinone) subunit identified by match to protein family HMM PF00361 gene gene3199 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2072 BCG9842_B2073 BCG9842_B2073 BCG9842_B2073 3072504 3075110 - conserved hypothetical protein gene gene3198 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2073 BCG9842_B2074 BCG9842_B2074 BCG9842_B2074 3071928 3072440 - conserved hypothetical protein identified by match to protein family HMM PF00484 gene gene3197 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2074 BCG9842_B2075 BCG9842_B2075 BCG9842_B2075 3070412 3071842 - deoxyribodipyrimidine photolyase family protein identified by match to protein family HMM PF00875%3B match to protein family HMM PF03441 gene gene3196 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2075 BCG9842_B2076 BCG9842_B2076 BCG9842_B2076 3069845 3070300 - TspO/MBR family protein identified by match to protein family HMM PF03073 gene gene3195 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2076 BCG9842_B2077 BCG9842_B2077 BCG9842_B2077 3069031 3069741 - conserved hypothetical protein gene gene3194 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2077 BCG9842_B2078 BCG9842_B2078 BCG9842_B2078 3068578 3068943 + conserved hypothetical protein identified by match to protein family HMM TIGR01655 gene gene3193 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2078 BCG9842_B2079 BCG9842_B2079 BCG9842_B2079 3066464 3068002 - putative hydrolase gene gene3192 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2079 BCG9842_B2080 BCG9842_B2080 BCG9842_B2080 3065690 3066076 - conserved hypothetical protein gene gene3191 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2080 BCG9842_B2081 BCG9842_B2081 BCG9842_B2081 3065205 3065615 - conserved hypothetical protein gene gene3190 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2081 BCG9842_B2082 BCG9842_B2082 BCG9842_B2082 3064144 3065169 - conserved hypothetical protein gene gene3189 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2082 BCG9842_B2083 BCG9842_B2083 BCG9842_B2083 3062888 3063838 - CorA-like Mg2+ transporter family protein identified by match to protein family HMM PF01544 gene gene3188 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2083 BCG9842_B2084 BCG9842_B2084 BCG9842_B2084 3061987 3062430 - transcriptional regulator%2C MarR family identified by match to protein family HMM PF01047 gene gene3187 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2084 BCG9842_B2085 BCG9842_B2085 BCG9842_B2085 3060889 3061767 - transcriptional regulator%2C LysR family identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466 gene gene3186 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2085 BCG9842_B2086 BCG9842_B2086 BCG9842_B2086 3058749 3060584 + amidohydrolase family protein identified by match to protein family HMM PF07969 gene gene3185 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2086 BCG9842_B2087 BCG9842_B2087 BCG9842_B2087 3058142 3058735 + conserved hypothetical protein gene gene3184 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2087 BCG9842_B2088 BCG9842_B2088 BCG9842_B2088 3057501 3058145 + isochorismatase family protein identified by match to protein family HMM PF00857 gene gene3183 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2088 BCG9842_B2089 BCG9842_B2089 BCG9842_B2089 3056703 3057347 + isochorismatase family protein identified by match to protein family HMM PF00857 gene gene3182 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2089 BCG9842_B2090 BCG9842_B2090 BCG9842_B2090 3055375 3056211 - bromoperoxidase identified by match to protein family HMM PF00561 gene gene3181 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2090 BCG9842_B2091 BCG9842_B2091 BCG9842_B2091 3053382 3054971 - putative 5'-nucleotidase identified by match to protein family HMM PF00149%3B match to protein family HMM PF02872 gene gene3180 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2091 BCG9842_B2092 BCG9842_B2092 BCG9842_B2092 3053003 3053158 - succinoglycan biosynthesis protein gene gene3179 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2092 BCG9842_B2093 BCG9842_B2093 BCG9842_B2093 3051350 3052573 - putative D-alanyl-D-alanine carboxypeptidase identified by match to protein family HMM PF00144 gene gene3178 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2093 BCG9842_B2094 BCG9842_B2094 BCG9842_B2094 3050749 3051009 - putative cytochrome P450 CypX gene gene3177 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2094 BCG9842_B2095 BCG9842_B2095 BCG9842_B2095 3049336 3050487 + putative transporter identified by match to protein family HMM PF03600 gene gene3176 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2095 BCG9842_B2096 BCG9842_B2096 BCG9842_B2096 3046959 3048383 - sodium/alanine symporter family protein identified by match to protein family HMM PF01235%3B match to protein family HMM TIGR00835 gene gene3175 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2096 BCG9842_B2097 BCG9842_B2097 glsA2 glsA2 3045854 3046834 - glutaminase A identified by match to protein family HMM PF04960 gene gene3174 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2097 BCG9842_B2098 BCG9842_B2098 BCG9842_B2098 3044304 3045095 - sensor histidine kinase identified by match to protein family HMM PF02518 gene gene3173 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2098 BCG9842_B2099 BCG9842_B2099 BCG9842_B2099 3043355 3044299 - response regulator identified by match to protein family HMM PF00072%3B match to protein family HMM PF08664 gene gene3172 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2099 BCG9842_B2100 BCG9842_B2100 BCG9842_B2100 3042662 3042796 - hypothetical protein identified by glimmer%3B putative gene gene3171 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2100 BCG9842_B2101 BCG9842_B2101 gerAA gerAA 3041091 3042665 - spore germination protein GerAA identified by match to protein family HMM PF03323 gene gene3170 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2101 BCG9842_B2102 BCG9842_B2102 BCG9842_B2102 3039973 3041064 - spore germination protein A2 identified by match to protein family HMM PF03845%3B match to protein family HMM TIGR00912 gene gene3169 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2102 BCG9842_B2103 BCG9842_B2103 gerAC gerAC 3038783 3039976 - spore germination protein GerAC identified by match to protein family HMM PF05504%3B match to protein family HMM TIGR02887 gene gene3168 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2103 BCG9842_B2104 BCG9842_B2104 BCG9842_B2104 3038243 3038368 + hypothetical protein identified by glimmer%3B putative gene gene3167 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2104 BCG9842_B2105 BCG9842_B2105 proC2 proC2 3037639 3038103 - pyrroline-5-carboxylate reductase identified by match to protein family HMM PF03807 gene gene3166 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2105 BCG9842_B2106 BCG9842_B2106 BCG9842_B2106 3036090 3037505 - amino acid permease family protein identified by match to protein family HMM PF00324%3B match to protein family HMM PF03845 gene gene3165 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2106 BCG9842_B2107 BCG9842_B2107 BCG9842_B2107 3035283 3035924 - conserved hypothetical protein identified by match to protein family HMM PF01541 gene gene3164 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2107 BCG9842_B2108 BCG9842_B2108 BCG9842_B2108 3033984 3034112 + hypothetical protein identified by glimmer%3B putative gene gene3163 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2108 BCG9842_B2109 BCG9842_B2109 BCG9842_B2109 3032925 3033554 - transcriptional regulator%2C AraC family an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift gene gene3162 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2109 BCG9842_B2110 BCG9842_B2110 BCG9842_B2110 3032326 3032883 - transcriptional regulator%2C AraC family an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF00165 gene gene3161 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2110 BCG9842_B2111 BCG9842_B2111 BCG9842_B2111 3029826 3031145 - hemolysin BL lytic component L2 identified by match to protein family HMM PF05791 gene gene3160 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2111 BCG9842_B2112 BCG9842_B2112 BCG9842_B2112 3028544 3029764 - hemolysin BL lytic component L1 identified by match to protein family HMM PF05791 gene gene3159 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2112 BCG9842_B2113 BCG9842_B2113 BCG9842_B2113 3027380 3028507 - Hbl B protein identified by match to protein family HMM PF05791 gene gene3158 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2113 BCG9842_B2114 BCG9842_B2114 BCG9842_B2114 3025605 3027005 - hemolysin BL binding component identified by match to protein family HMM PF05791 gene gene3157 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2114 BCG9842_B2115 BCG9842_B2115 BCG9842_B2115 3022518 3024923 - sporulation kinase identified by match to protein family HMM PF00512%3B match to protein family HMM PF00989%3B match to protein family HMM PF02518%3B match to protein family HMM PF08447%3B match to protein family HMM PF08448%3B match to protein family HMM TIGR00229 gene gene3156 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2115 BCG9842_B2116 BCG9842_B2116 BCG9842_B2116 3020652 3022151 - spore germination protein%2C GerA family identified by match to protein family HMM PF03323 gene gene3155 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2116 BCG9842_B2117 BCG9842_B2117 BCG9842_B2117 3019549 3020631 - spore germination protein%2C GerB family identified by match to protein family HMM PF03845%3B match to protein family HMM TIGR00912 gene gene3154 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2117 BCG9842_B2118 BCG9842_B2118 BCG9842_B2118 3018467 3019546 - spore germination protein%2C GerC family identified by match to protein family HMM PF05504%3B match to protein family HMM TIGR02887 gene gene3153 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2118 BCG9842_B2119 BCG9842_B2119 BCG9842_B2119 3017747 3017881 + conserved hypothetical protein gene gene3152 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2119 BCG9842_B2120 BCG9842_B2120 ansR ansR 3017231 3017608 + transcriptional regulator AnsR identified by match to protein family HMM PF01381 gene gene3151 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2120 BCG9842_B2121 BCG9842_B2121 ansA2 ansA2 3016042 3017046 - L-asparaginase identified by match to protein family HMM PF00710%3B match to protein family HMM TIGR00519 gene gene3150 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2121 BCG9842_B2122 BCG9842_B2122 aspA3 aspA3 3014558 3015988 - aspartate ammonia-lyase identified by match to protein family HMM PF00206%3B match to protein family HMM TIGR00839 gene gene3149 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2122 BCG9842_B2123 BCG9842_B2123 BCG9842_B2123 3013442 3014296 + catalase%2C Mn-containing identified by match to protein family HMM PF05067 gene gene3148 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2123 BCG9842_B2124 BCG9842_B2124 BCG9842_B2124 3012116 3013249 + oxidoreductase%2C zinc-binding dehydrogenase family identified by match to protein family HMM PF00107%3B match to protein family HMM PF08240 gene gene3147 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2124 BCG9842_B2125 BCG9842_B2125 sasP2 sasP2 3011638 3011850 - small%2C acid-soluble spore protein identified by match to protein family HMM PF00269 gene gene3146 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2125 BCG9842_B2126 BCG9842_B2126 BCG9842_B2126 3010828 3011343 - conserved hypothetical protein gene gene3145 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2126 BCG9842_B2127 BCG9842_B2127 BCG9842_B2127 3010316 3010792 + conserved hypothetical protein gene gene3144 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2127 BCG9842_B2128 BCG9842_B2128 BCG9842_B2128 3009162 3010007 + metal-dependent hydrolase identified by match to protein family HMM PF00753 gene gene3143 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2128 BCG9842_B2129 BCG9842_B2129 BCG9842_B2129 3008960 3009073 - hypothetical protein identified by glimmer%3B putative gene gene3142 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2129 BCG9842_B2130 BCG9842_B2130 ppsA ppsA 3006052 3008658 - phosphoenolpyruvate synthase identified by match to protein family HMM PF00391%3B match to protein family HMM PF01326 gene gene3141 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2130 BCG9842_B2131 BCG9842_B2131 BCG9842_B2131 3005383 3006000 + transcriptional regulator%2C TetR family identified by match to protein family HMM PF00440 gene gene3140 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2131 BCG9842_B2132 BCG9842_B2132 BCG9842_B2132 3004030 3005211 - phage infection protein identified by match to protein family HMM PF01061 gene gene3139 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2132 BCG9842_B2133 BCG9842_B2133 BCG9842_B2133 3003419 3003925 + ribosomal-protein-alanine acetyltransferase identified by match to protein family HMM PF00583 gene gene3138 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2133 BCG9842_B2134 BCG9842_B2134 BCG9842_B2134 3002675 3003109 - YhjR gene gene3137 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2134 BCG9842_B2135 BCG9842_B2135 BCG9842_B2135 3001991 3002458 - YncE gene gene3136 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2135 BCG9842_B2136 BCG9842_B2136 BCG9842_B2136 3001452 3001967 - acetyltransferase%2C GNAT family identified by match to protein family HMM PF00583 gene gene3135 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2136 BCG9842_B2137 BCG9842_B2137 BCG9842_B2137 3000570 3001451 - aminoglycoside phosphotransferase family protein identified by match to protein family HMM PF01636 gene gene3134 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2137 BCG9842_B2138 BCG9842_B2138 BCG9842_B2138 2999133 3000461 - nucleoside recognition domain protein identified by match to protein family HMM PF07670 gene gene3133 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2138 BCG9842_B2139 BCG9842_B2139 BCG9842_B2139 2998326 2998913 - acetyltransferase%2C GNAT family identified by match to protein family HMM PF00583 gene gene3132 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2139 BCG9842_B2140 BCG9842_B2140 BCG9842_B2140 2998198 2998317 - conserved hypothetical protein gene gene3131 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2140 BCG9842_B2141 BCG9842_B2141 BCG9842_B2141 2997363 2997995 - conserved hypothetical protein identified by match to protein family HMM PF02698 gene gene3130 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2141 BCG9842_B2142 BCG9842_B2142 BCG9842_B2142 2995913 2997061 - putative acyl-CoA dehydrogenase%2C short-chain specific identified by match to protein family HMM PF00441%3B match to protein family HMM PF02770%3B match to protein family HMM PF08028 gene gene3129 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2142 BCG9842_B2143 BCG9842_B2143 BCG9842_B2143 2995227 2995697 + hypothetical protein identified by glimmer%3B putative gene gene3128 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2143 BCG9842_B2144 BCG9842_B2144 BCG9842_B2144 2994450 2995157 - transcriptional regulator%2C ArsR family identified by match to protein family HMM PF01022 gene gene3127 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2144 BCG9842_B2145 BCG9842_B2145 BCG9842_B2145 2993575 2994252 - putative copper homeostasis protein CutC identified by match to protein family HMM PF03932 gene gene3126 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2145 BCG9842_B2146 BCG9842_B2146 sipU sipU 2993000 2993551 - Signal peptidase I U identified by match to protein family HMM PF00717%3B match to protein family HMM TIGR02227 gene gene3125 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2146 BCG9842_B2147 BCG9842_B2147 BCG9842_B2147 2992092 2992844 - transcriptional regulator%2C IclR family identified by match to protein family HMM PF01614%3B match to protein family HMM PF09339 gene gene3124 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2147 BCG9842_B2148 BCG9842_B2148 BCG9842_B2148 2991364 2992077 - conserved hypothetical protein TIGR00370 identified by match to protein family HMM PF02682%3B match to protein family HMM TIGR00370 gene gene3123 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2148 BCG9842_B2149 BCG9842_B2149 BCG9842_B2149 2990384 2991373 - urea amidolyase-related protein identified by match to protein family HMM PF02626%3B match to protein family HMM TIGR00724 gene gene3122 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2149 BCG9842_B2150 BCG9842_B2150 BCG9842_B2150 2989604 2990365 - conserved hypothetical protein identified by match to protein family HMM PF03746 gene gene3121 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2150 BCG9842_B2151 BCG9842_B2151 BCG9842_B2151 2988887 2989582 - putative membrane protein identified by match to protein family HMM PF06149 gene gene3120 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2151 BCG9842_B2152 BCG9842_B2152 BCG9842_B2152 2987923 2988885 - putative membrane protein identified by match to protein family HMM PF06166 gene gene3119 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2152 BCG9842_B2153 BCG9842_B2153 pcP pcP 2987260 2987907 - pyrrolidone-carboxylate peptidase identified by match to protein family HMM PF01470%3B match to protein family HMM TIGR00504 gene gene3118 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2153 BCG9842_B2154 BCG9842_B2154 BCG9842_B2154 2986456 2987184 - transcriptional regulator%2C Sir2 family identified by match to protein family HMM PF02146 gene gene3117 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2154 BCG9842_B2155 BCG9842_B2155 BCG9842_B2155 2983979 2986132 - penicillin-binding protein identified by match to protein family HMM PF00905%3B match to protein family HMM PF03717 gene gene3116 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2155 BCG9842_B2156 BCG9842_B2156 lepB_1 lepB_1 2983376 2983897 - signal peptidase I identified by match to protein family HMM PF00717%3B match to protein family HMM TIGR02227 gene gene3115 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2156 BCG9842_B2157 BCG9842_B2157 BCG9842_B2157 2982829 2983341 + conserved hypothetical protein identified by match to protein family HMM PF04989 gene gene3114 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2157 BCG9842_B2158 BCG9842_B2158 BCG9842_B2158 2982035 2982559 - mutT/nudix family protein identified by match to protein family HMM PF00293 gene gene3113 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2158 BCG9842_B2159 BCG9842_B2159 BCG9842_B2159 2981093 2981854 + conserved hypothetical protein identified by match to protein family HMM PF08241 gene gene3112 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2159 BCG9842_B2160 BCG9842_B2160 BCG9842_B2160 2980816 2980965 - hypothetical protein identified by glimmer%3B putative gene gene3111 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2160 BCG9842_B2161 BCG9842_B2161 BCG9842_B2161 2980553 2980726 - sensor protein ResE gene gene3110 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2161 BCG9842_B2162 BCG9842_B2162 BCG9842_B2162 2979417 2980325 - putative acyl-[acyl-carrier protein] desaturase an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a premature stop%3B identified by match to protein family HMM PF03405 gene gene3109 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2162 BCG9842_B2163 BCG9842_B2163 BCG9842_B2163 2979295 2979417 - hypothetical protein identified by glimmer%3B putative gene gene3108 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2163 BCG9842_B2164 BCG9842_B2164 BCG9842_B2164 2978739 2979200 - transcriptional regulator%2C CarD family identified by match to protein family HMM PF02559 gene gene3107 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2164 BCG9842_B2165 BCG9842_B2165 BCG9842_B2165 2978046 2978192 - conserved domain protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift gene gene3106 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2165 BCG9842_B2166 BCG9842_B2166 BCG9842_B2166 2977543 2977749 - conserved hypothetical protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift gene gene3105 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2166 BCG9842_B2167 BCG9842_B2167 BCG9842_B2167 2977042 2977275 - conserved hypothetical protein gene gene3104 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2167 BCG9842_B2168 BCG9842_B2168 BCG9842_B2168 2976707 2976982 + conserved hypothetical protein gene gene3103 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2168 BCG9842_B2169 BCG9842_B2169 BCG9842_B2169 2976459 2976575 + hypothetical protein identified by glimmer%3B putative gene gene3102 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2169 BCG9842_B2170 BCG9842_B2170 BCG9842_B2170 2975330 2976280 - inosine-uridine preferring nucleoside hydrolase family protein identified by match to protein family HMM PF01156 gene gene3101 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2170 BCG9842_B2171 BCG9842_B2171 BCG9842_B2171 2975081 2975224 + cytochrome P450 an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts gene gene3100 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2171 BCG9842_B2172 BCG9842_B2172 BCG9842_B2172 2974756 2974884 + cytochrome p450 an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts gene gene3099 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2172 BCG9842_B2173 BCG9842_B2173 BCG9842_B2173 2974205 2974453 + tetracycline resistance protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift gene gene3098 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2173 BCG9842_B2174 BCG9842_B2174 BCG9842_B2174 2973692 2974135 + 3-methylpurine-DNA glycosylase an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a premature stop gene gene3097 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2174 BCG9842_B2175 BCG9842_B2175 BCG9842_B2175 2973353 2973658 + conserved hypothetical protein gene gene3096 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2175 BCG9842_B2176 BCG9842_B2176 lysP lysP 2971773 2973239 + lysine-specific permease identified by match to protein family HMM PF00324 gene gene3095 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2176 BCG9842_B2178 BCG9842_B2178 BCG9842_B2178 2970634 2971083 - acetyltransferase%2C GNAT family identified by match to protein family HMM PF00583 gene gene3094 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2178 BCG9842_B2179 BCG9842_B2179 BCG9842_B2179 2969584 2970594 + putative membrane protein identified by match to protein family HMM PF01925 gene gene3093 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2179 BCG9842_B2180 BCG9842_B2180 BCG9842_B2180 2968688 2969485 - conserved domain protein gene gene3092 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2180 BCG9842_B2181 BCG9842_B2181 BCG9842_B2181 2967735 2968673 - aminoglycoside phosphotransferase identified by match to protein family HMM PF01636 gene gene3091 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2181 BCG9842_B2182 BCG9842_B2182 BCG9842_B2182 2966978 2967721 - phosphatase family protein identified by match to protein family HMM PF00149 gene gene3090 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2182 BCG9842_B2183 BCG9842_B2183 BCG9842_B2183 2966099 2966764 - conserved hypothetical protein gene gene3089 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2183 BCG9842_B2184 BCG9842_B2184 BCG9842_B2184 2965151 2965975 - conserved hypothetical protein gene gene3088 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2184 BCG9842_B2185 BCG9842_B2185 BCG9842_B2185 2964160 2965032 + hypothetical protein identified by glimmer%3B putative gene gene3087 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2185 BCG9842_B2186 BCG9842_B2186 BCG9842_B2186 2963602 2963916 - conserved hypothetical protein gene gene3086 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2186 BCG9842_B2187 BCG9842_B2187 BCG9842_B2187 2963075 2963515 + yaiI/yqxD family protein identified by match to protein family HMM PF02639 gene gene3085 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2187 BCG9842_B2188 BCG9842_B2188 BCG9842_B2188 2961553 2963004 + transcriptional regulator%2C GntR family/aminotransferase%2C class I protein identified by match to protein family HMM PF00155%3B match to protein family HMM PF00392 gene gene3084 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2188 BCG9842_B2189 BCG9842_B2189 BCG9842_B2189 2960517 2961428 - transporter%2C EamA family identified by match to protein family HMM PF00892 gene gene3083 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2189 BCG9842_B2190 BCG9842_B2190 BCG9842_B2190 2960031 2960483 + mutT/nudix family protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a premature stop%3B identified by match to protein family HMM PF00293 gene gene3082 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2190 BCG9842_B2191 BCG9842_B2191 BCG9842_B2191 2959533 2959934 - hypothetical protein identified by glimmer%3B putative gene gene3081 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2191 BCG9842_B2192 BCG9842_B2192 BCG9842_B2192 2959045 2959515 - acetyltransferase%2C GNAT family identified by match to protein family HMM PF00583 gene gene3080 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2192 BCG9842_B2193 BCG9842_B2193 BCG9842_B2193 2958106 2958996 - transcriptional regulator%2C AraC family identified by match to protein family HMM PF00165%3B match to protein family HMM PF06445 gene gene3079 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2193 BCG9842_B2194 BCG9842_B2194 BCG9842_B2194 2957138 2958082 - beta-lactamase identified by match to protein family HMM PF00144 gene gene3078 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2194 BCG9842_B2195 BCG9842_B2195 BCG9842_B2195 2957052 2957186 - hypothetical protein identified by glimmer%3B putative gene gene3077 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2195 BCG9842_B2196 BCG9842_B2196 BCG9842_B2196 2956870 2956992 - hypothetical protein identified by glimmer%3B putative gene gene3076 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2196 BCG9842_B2197 BCG9842_B2197 BCG9842_B2197 2955688 2956773 - ABC transporter%2C permease protein identified by match to protein family HMM PF02687 gene gene3075 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2197 BCG9842_B2198 BCG9842_B2198 BCG9842_B2198 2954417 2955682 - ABC transporter%2C permease protein identified by match to protein family HMM PF02687 gene gene3074 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2198 BCG9842_B2199 BCG9842_B2199 BCG9842_B2199 2953752 2954417 - ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005 gene gene3073 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2199 BCG9842_B2200 BCG9842_B2200 BCG9842_B2200 2952572 2953609 - isoflavone reductase identified by match to protein family HMM PF01370 gene gene3072 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2200 BCG9842_B2201 BCG9842_B2201 BCG9842_B2201 2951721 2952512 + WGR domain family identified by match to protein family HMM PF05406 gene gene3071 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2201 BCG9842_B2202 BCG9842_B2202 BCG9842_B2202 2951060 2951527 - phosphohydrolase identified by match to protein family HMM PF00293 gene gene3070 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2202 BCG9842_B2203 BCG9842_B2203 BCG9842_B2203 2950394 2951038 - conserved hypothetical protein gene gene3069 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2203 BCG9842_B2204 BCG9842_B2204 BCG9842_B2204 2948404 2950347 + GTP-binding elongation factor protein%2C TetM/TetO family identified by match to protein family HMM PF00009%3B match to protein family HMM PF00679%3B match to protein family HMM PF03144%3B match to protein family HMM PF03764%3B match to protein family HMM PF08477%3B match to protein family HMM TIGR00231 gene gene3068 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2204 BCG9842_B2205 BCG9842_B2205 BCG9842_B2205 2947710 2948138 - transcriptional regulator%2C MarR family identified by match to protein family HMM PF01047 gene gene3067 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2205 BCG9842_B2206 BCG9842_B2206 BCG9842_B2206 2947053 2947691 - nitroreductase family protein identified by match to protein family HMM PF00881 gene gene3066 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2206 BCG9842_B2207 BCG9842_B2207 BCG9842_B2207 2946713 2947006 - conserved hypothetical protein identified by match to protein family HMM PF03992 gene gene3065 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2207 BCG9842_B2208 BCG9842_B2208 BCG9842_B2208 2946225 2946500 - conserved hypothetical protein gene gene3064 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2208 BCG9842_B2209 BCG9842_B2209 BCG9842_B2209 2945822 2946184 - conserved hypothetical protein gene gene3063 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2209 BCG9842_B2210 BCG9842_B2210 BCG9842_B2210 2944059 2945825 - hypothetical Cytosolic Protein gene gene3062 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2210 BCG9842_B2211 BCG9842_B2211 BCG9842_B2211 2942784 2944031 - conserved hypothetical protein identified by match to protein family HMM PF08928%3B match to protein family HMM PF08929 gene gene3061 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2211 BCG9842_B2212 BCG9842_B2212 BCG9842_B2212 2941828 2942487 - hypothetical Cytosolic Protein gene gene3060 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2212 BCG9842_B2213 BCG9842_B2213 BCG9842_B2213 2941095 2941817 - conserved hypothetical protein identified by match to protein family HMM PF08928%3B match to protein family HMM PF08929 gene gene3059 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2213 BCG9842_B2214 BCG9842_B2214 BCG9842_B2214 2940251 2940742 - YD repeat protein gene gene3058 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2214 BCG9842_B2215 BCG9842_B2215 BCG9842_B2215 2939748 2940245 - conserved hypothetical protein gene gene3057 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2215 BCG9842_B2216 BCG9842_B2216 BCG9842_B2216 2938749 2939255 - hypothetical protein identified by glimmer%3B putative gene gene3056 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2216 BCG9842_B2217 BCG9842_B2217 adP2 adP2 2937324 2938490 - alkaline D-peptidase identified by match to protein family HMM PF00144 gene gene3055 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2217 BCG9842_B2218 BCG9842_B2218 BCG9842_B2218 2935226 2936980 - putative adenine deaminase identified by match to protein family HMM PF01979 gene gene3054 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2218 BCG9842_B2219 BCG9842_B2219 BCG9842_B2219 2934591 2935112 - conserved domain protein gene gene3053 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2219 BCG9842_B2220 BCG9842_B2220 BCG9842_B2220 2933086 2934465 + catalase identified by match to protein family HMM PF00199 gene gene3052 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2220 BCG9842_B2221 BCG9842_B2221 BCG9842_B2221 2931567 2932784 - acetylornithine aminotransferase identified by match to protein family HMM PF00202 gene gene3051 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2221 BCG9842_B2222 BCG9842_B2222 BCG9842_B2222 2929871 2931328 - major facilitator family transporter identified by match to protein family HMM PF00083%3B match to protein family HMM PF07690 gene gene3050 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2222 BCG9842_B2223 BCG9842_B2223 BCG9842_B2223 2929499 2929654 - conserved hypothetical protein gene gene3049 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2223 BCG9842_B2224 BCG9842_B2224 BCG9842_B2224 2928369 2929217 - hypothetical protein identified by glimmer%3B putative gene gene3048 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2224 BCG9842_B2225 BCG9842_B2225 BCG9842_B2225 2927071 2928180 + conserved hypothetical protein gene gene3047 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2225 BCG9842_B2226 BCG9842_B2226 BCG9842_B2226 2925933 2927099 + conserved domain protein identified by match to protein family HMM PF01882 gene gene3046 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2226 BCG9842_B2227 BCG9842_B2227 BCG9842_B2227 2925007 2925936 + conserved hypothetical protein identified by match to protein family HMM PF07726%3B match to protein family HMM PF07728 gene gene3045 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2227 BCG9842_B2228 BCG9842_B2228 BCG9842_B2228 2924483 2924800 - conserved hypothetical protein identified by match to protein family HMM PF03551 gene gene3044 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2228 BCG9842_B2229 BCG9842_B2229 BCG9842_B2229 2923948 2924475 - conserved hypothetical protein gene gene3043 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2229 BCG9842_B2230 BCG9842_B2230 BCG9842_B2230 2923158 2923403 + conserved hypothetical protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a premature stop gene gene3042 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2230 BCG9842_B2231 BCG9842_B2231 BCG9842_B2231 2922493 2922876 - glyoxalase family protein identified by match to protein family HMM PF00903 gene gene3041 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2231 BCG9842_B2232 BCG9842_B2232 BCG9842_B2232 2921936 2922478 - acetyltransferase%2C GNAT family identified by match to protein family HMM PF00583 gene gene3040 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2232 BCG9842_B2233 BCG9842_B2233 BCG9842_B2233 2921355 2921936 - conserved hypothetical protein gene gene3039 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2233 BCG9842_B2234 BCG9842_B2234 BCG9842_B2234 2920753 2921331 - phosphoglycolate phosphatase identified by match to protein family HMM PF00702%3B match to protein family HMM TIGR01549 gene gene3038 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2234 BCG9842_B2235 BCG9842_B2235 BCG9842_B2235 2920169 2920480 - conserved hypothetical protein gene gene3037 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2235 BCG9842_B2236 BCG9842_B2236 BCG9842_B2236 2919913 2920128 + DNA-binding protein gene gene3036 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2236 BCG9842_B2237 BCG9842_B2237 BCG9842_B2237 2919420 2919902 + conserved hypothetical protein gene gene3035 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2237 BCG9842_B2238 BCG9842_B2238 BCG9842_B2238 2917453 2919126 - alkaline phosphatase identified by match to protein family HMM PF00245 gene gene3034 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2238 BCG9842_B2239 BCG9842_B2239 BCG9842_B2239 2916136 2916966 - vancomycin B-type resistance protein VanW identified by match to protein family HMM PF04294 gene gene3033 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2239 BCG9842_B2240 BCG9842_B2240 BCG9842_B2240 2913459 2915846 - immune inhibitor A identified by match to protein family HMM PF05547%3B match to protein family HMM TIGR03296 gene gene3032 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2240 BCG9842_B2241 BCG9842_B2241 BCG9842_B2241 2913212 2913370 + hypothetical protein identified by glimmer%3B putative gene gene3031 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2241 BCG9842_B2242 BCG9842_B2242 BCG9842_B2242 2912121 2913152 - fatty acid desaturase identified by match to protein family HMM PF00487 gene gene3030 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2242 BCG9842_B2243 BCG9842_B2243 BCG9842_B2243 2911476 2911820 + fosfomycin resistance protein gene gene3029 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2243 BCG9842_B2244 BCG9842_B2244 BCG9842_B2244 2911137 2911256 + conserved hypothetical protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift gene gene3028 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2244 BCG9842_B2245 BCG9842_B2245 BCG9842_B2245 2910566 2910913 + glyoxalase/Bleomycin resistance protein/Dioxygenase family protein gene gene3027 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2245 BCG9842_B2246 BCG9842_B2246 BCG9842_B2246 2910374 2910523 + hypothetical protein identified by glimmer%3B putative gene gene3026 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2246 BCG9842_B2247 BCG9842_B2247 BCG9842_B2247 2908802 2910226 + amino acid permease family protein identified by match to protein family HMM PF00324 gene gene3025 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2247 BCG9842_B2248 BCG9842_B2248 BCG9842_B2248 2907785 2908534 - transcriptional regulator%2C IclR family identified by match to protein family HMM PF01614%3B match to protein family HMM PF09339 gene gene3024 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2248 BCG9842_B2249 BCG9842_B2249 rocB rocB 2906069 2907709 - RocB protein identified by match to protein family HMM PF01546 gene gene3023 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2249 BCG9842_B2250 BCG9842_B2250 proC1 proC1 2905072 2905890 + pyrroline-5-carboxylate reductase identified by match to protein family HMM PF03446%3B match to protein family HMM PF03807%3B match to protein family HMM TIGR00112 gene gene3022 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2250 BCG9842_B2251 BCG9842_B2251 proB proB 2903279 2904382 - glutamate 5-kinase identified by match to protein family HMM PF00696%3B match to protein family HMM PF01472%3B match to protein family HMM TIGR01027 gene gene3021 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2251 BCG9842_B2252 BCG9842_B2252 proA proA 2902015 2903262 - gamma-glutamyl phosphate reductase identified by match to protein family HMM TIGR00407 gene gene3020 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2252 BCG9842_B2253 BCG9842_B2253 BCG9842_B2253 2900765 2901958 + nucleoside transporter%2C NupC family identified by match to protein family HMM PF01773%3B match to protein family HMM PF07662%3B match to protein family HMM TIGR00804 gene gene3019 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2253 BCG9842_B2254 BCG9842_B2254 BCG9842_B2254 2899556 2900599 - transcriptional regulator%2C ArsR family identified by match to protein family HMM PF01022 gene gene3018 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2254 BCG9842_B2255 BCG9842_B2255 BCG9842_B2255 2898284 2899498 - putative permease identified by match to protein family HMM PF07690 gene gene3017 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2255 BCG9842_B2256 BCG9842_B2256 BCG9842_B2256 2897861 2898187 - conserved hypothetical protein identified by match to protein family HMM PF03992 gene gene3016 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2256 BCG9842_B2257 BCG9842_B2257 BCG9842_B2257 2897208 2897627 - glyoxalase family protein identified by match to protein family HMM PF00903 gene gene3015 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2257 BCG9842_B2258 BCG9842_B2258 BCG9842_B2258 2896498 2897103 + conserved hypothetical protein gene gene3014 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2258 BCG9842_B2259 BCG9842_B2259 BCG9842_B2259 2895650 2896432 + conserved hypothetical protein identified by match to protein family HMM PF01791 gene gene3013 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2259 BCG9842_B2260 BCG9842_B2260 BCG9842_B2260 2895281 2895643 + polyketide synthesis domain protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF07883 gene gene3012 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2260 BCG9842_B2261 BCG9842_B2261 BCG9842_B2261 2893692 2895254 + carbohydrate kinase%2C FGGY family identified by match to protein family HMM PF00370%3B match to protein family HMM PF02782 gene gene3011 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2261 BCG9842_B2262 BCG9842_B2262 BCG9842_B2262 2892742 2893692 + putative transcriptional regulator identified by match to protein family HMM PF04198 gene gene3010 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2262 BCG9842_B2263 BCG9842_B2263 BCG9842_B2263 2891081 2892562 - putative ribose ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005 gene gene3009 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2263 BCG9842_B2264 BCG9842_B2264 BCG9842_B2264 2890131 2891084 - putative ribose ABC transporter%2C permease protein identified by match to protein family HMM PF02653 gene gene3008 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2264 BCG9842_B2265 BCG9842_B2265 BCG9842_B2265 2889145 2890134 - putative ribose ABC transporter%2C permease protein identified by match to protein family HMM PF02653 gene gene3007 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2265 BCG9842_B2266 BCG9842_B2266 BCG9842_B2266 2888105 2889148 - putative sugar ABC transporter%2C sugar-binding protein gene gene3006 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2266 BCG9842_B2267 BCG9842_B2267 mqo mqo 2886557 2888059 + malate:quinone-oxidoreductase identified by match to protein family HMM PF01266%3B match to protein family HMM PF06039%3B match to protein family HMM TIGR01320 gene gene3005 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2267 BCG9842_B2268 BCG9842_B2268 BCG9842_B2268 2885944 2886180 - conserved hypothetical protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift gene gene3004 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2268 BCG9842_B2269 BCG9842_B2269 BCG9842_B2269 2885135 2885860 - conserved hypothetical protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift gene gene3003 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2269 BCG9842_B2270 BCG9842_B2270 BCG9842_B2270 2884654 2885001 + hypothetical protein identified by glimmer%3B putative gene gene3002 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2270 BCG9842_B2271 BCG9842_B2271 BCG9842_B2271 2884047 2884529 + conserved hypothetical protein gene gene3001 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2271 BCG9842_B2272 BCG9842_B2272 BCG9842_B2272 2883123 2883614 - conserved hypothetical protein gene gene3000 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2272 BCG9842_B2273 BCG9842_B2273 BCG9842_B2273 2881408 2882910 - enterotoxin identified by match to protein family HMM PF06347%3B match to protein family HMM PF06725%3B match to protein family HMM PF08239 gene gene2999 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2273 BCG9842_B2274 BCG9842_B2274 BCG9842_B2274 2880527 2881051 + conserved hypothetical protein gene gene2998 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2274 BCG9842_B2275 BCG9842_B2275 BCG9842_B2275 2879969 2880181 - group-specific protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts gene gene2997 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2275 BCG9842_B2276 BCG9842_B2276 BCG9842_B2276 2879417 2879956 - bifunctional AAC/APH identified by match to protein family HMM PF00583 gene gene2996 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2276 BCG9842_B2277 BCG9842_B2277 BCG9842_B2277 2878844 2879374 - isochorismatase family protein identified by match to protein family HMM PF00857 gene gene2995 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2277 BCG9842_B2278 BCG9842_B2278 BCG9842_B2278 2878257 2878694 + conserved hypothetical protein gene gene2994 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2278 BCG9842_B2279 BCG9842_B2279 BCG9842_B2279 2874593 2878075 - conserved hypothetical protein gene gene2993 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2279 BCG9842_B2280 BCG9842_B2280 BCG9842_B2280 2872687 2873763 - chorismate mutase/phospho-2-dehydro-3-deoxyheptonate aldolase identified by match to protein family HMM PF00793%3B match to protein family HMM PF01817%3B match to protein family HMM TIGR01361%3B match to protein family HMM TIGR01801 gene gene2992 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2280 BCG9842_B2281 BCG9842_B2281 aroC2 aroC2 2871232 2872404 - chorismate synthase identified by match to protein family HMM PF01264%3B match to protein family HMM TIGR00033 gene gene2991 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2281 BCG9842_B2282 BCG9842_B2282 hisC2 hisC2 2870113 2871213 - histidinol-phosphate aminotransferase identified by match to protein family HMM PF00155%3B match to protein family HMM TIGR01141 gene gene2990 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2282 BCG9842_B2283 BCG9842_B2283 tyrA tyrA 2869020 2870120 - prephenate dehydrogenase identified by match to protein family HMM PF01210%3B match to protein family HMM PF01842%3B match to protein family HMM PF02153 gene gene2989 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2283 BCG9842_B2284 BCG9842_B2284 aroA aroA 2867713 2869002 - 3-phosphoshikimate 1-carboxyvinyltransferase identified by match to protein family HMM PF00275%3B match to protein family HMM TIGR01356 gene gene2988 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2284 BCG9842_B2285 BCG9842_B2285 BCG9842_B2285 2866427 2867587 - acetyltransferase%2C GNAT family identified by match to protein family HMM PF00583 gene gene2987 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2285 BCG9842_B2286 BCG9842_B2286 BCG9842_B2286 2865631 2866197 - transcriptional regulator%2C TetR family identified by match to protein family HMM PF00440 gene gene2986 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2286 BCG9842_B2287 BCG9842_B2287 BCG9842_B2287 2862262 2865378 - membrane protein%2C MmpL family identified by match to protein family HMM PF03176 gene gene2985 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2287 BCG9842_B2288 BCG9842_B2288 BCG9842_B2288 2860324 2861949 - ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005 gene gene2984 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2288 BCG9842_B2289 BCG9842_B2289 BCG9842_B2289 2857832 2859805 - sulfatase identified by match to protein family HMM PF00884 gene gene2983 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2289 BCG9842_B2290 BCG9842_B2290 BCG9842_B2290 2857105 2857776 + putative membrane protein identified by match to protein family HMM PF03741 gene gene2982 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2290 BCG9842_B2291 BCG9842_B2291 BCG9842_B2291 2856765 2856923 + drug resistance transporter%2C EmrB/QacA subfamily an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift gene gene2981 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2291 BCG9842_B2292 BCG9842_B2292 BCG9842_B2292 2856195 2856662 - conserved hypothetical protein gene gene2980 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2292 BCG9842_B2293 BCG9842_B2293 BCG9842_B2293 2855615 2856040 - conserved hypothetical protein gene gene2979 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2293 BCG9842_B2294 BCG9842_B2294 BCG9842_B2294 2854791 2855573 + polysaccharide deacetylase identified by match to protein family HMM PF01522 gene gene2978 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2294 BCG9842_B2295 BCG9842_B2295 BCG9842_B2295 2854298 2854528 - conserved hypothetical protein gene gene2977 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2295 BCG9842_B2296 BCG9842_B2296 BCG9842_B2296 2852768 2853589 - hydrolase gene gene2976 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2296 BCG9842_B2297 BCG9842_B2297 BCG9842_B2297 2852190 2852579 - prolyl endopeptidase identified by match to protein family HMM PF00903 gene gene2975 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2297 BCG9842_B2298 BCG9842_B2298 BCG9842_B2298 2851068 2852015 - cysteine synthase A identified by match to protein family HMM PF00291 gene gene2974 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2298 BCG9842_B2299 BCG9842_B2299 BCG9842_B2299 2850186 2850869 - conserved hypothetical protein identified by match to protein family HMM PF06352 gene gene2973 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2299 BCG9842_B2300 BCG9842_B2300 BCG9842_B2300 2849504 2850169 - nucleotidyltransferase gene gene2972 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2300 BCG9842_B2301 BCG9842_B2301 BCG9842_B2301 2849002 2849547 - acetyltransferase%2C GNAT family identified by match to protein family HMM PF00583 gene gene2971 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2301 BCG9842_B2302 BCG9842_B2302 BCG9842_B2302 2848468 2848968 - acetyltransferase%2C GNAT family identified by match to protein family HMM PF00583 gene gene2970 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2302 BCG9842_B2303 BCG9842_B2303 BCG9842_B2303 2848009 2848452 - conserved hypothetical protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift gene gene2969 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2303 BCG9842_B2304 BCG9842_B2304 BCG9842_B2304 2846923 2847861 - putative membrane protein gene gene2968 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2304 BCG9842_B2305 BCG9842_B2305 BCG9842_B2305 2846465 2846866 - acetyltransferase%2C GNAT family identified by match to protein family HMM PF00583 gene gene2967 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2305 BCG9842_B2306 BCG9842_B2306 aacC7 aacC7 2845431 2846234 - aminoglycoside N3-acetyltransferase identified by match to protein family HMM PF02522 gene gene2966 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2306 BCG9842_B2307 BCG9842_B2307 BCG9842_B2307 2844726 2845415 - putative flavoprotein identified by match to protein family HMM PF04127 gene gene2965 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2307 BCG9842_B2308 BCG9842_B2308 BCG9842_B2308 2844111 2844584 - TPR domain protein identified by match to protein family HMM PF07719 gene gene2964 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2308 BCG9842_B2309 BCG9842_B2309 BCG9842_B2309 2843043 2844098 - putative membrane protein gene gene2963 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2309 BCG9842_B2310 BCG9842_B2310 BCG9842_B2310 2842357 2842869 - conserved hypothetical protein identified by match to protein family HMM PF04167 gene gene2962 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2310 BCG9842_B2311 BCG9842_B2311 BCG9842_B2311 2841420 2842175 - putative sulfonate ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005 gene gene2961 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2311 BCG9842_B2312 BCG9842_B2312 BCG9842_B2312 2840416 2841402 - putative sulfonate ABC transporter%2C sulfonate-binding protein identified by match to protein family HMM PF04069%3B match to protein family HMM PF09084%3B match to protein family HMM TIGR01728 gene gene2960 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2312 BCG9842_B2313 BCG9842_B2313 BCG9842_B2313 2839551 2840399 - putative sulfonate ABC transporter%2C permease protein identified by match to protein family HMM PF00528 gene gene2959 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2313 BCG9842_B2314 BCG9842_B2314 ssuD ssuD 2838362 2839474 - alkanesulfonate monooxygenase identified by match to protein family HMM PF00296%3B match to protein family HMM TIGR03565 gene gene2958 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2314 BCG9842_B2315 BCG9842_B2315 BCG9842_B2315 2837024 2837845 + hypothetical protein identified by glimmer%3B putative gene gene2957 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2315 BCG9842_B2316 BCG9842_B2316 BCG9842_B2316 2835789 2836874 - putative membrane protein identified by match to protein family HMM PF01594 gene gene2956 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2316 BCG9842_B2317 BCG9842_B2317 BCG9842_B2317 2835408 2835548 + conserved hypothetical protein identified by match to protein family HMM PF09501%3B match to protein family HMM TIGR02413 gene gene2955 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2317 BCG9842_B2318 BCG9842_B2318 BCG9842_B2318 2835240 2835380 + conserved hypothetical protein identified by match to protein family HMM PF09501%3B match to protein family HMM TIGR02413 gene gene2954 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2318 BCG9842_B2319 BCG9842_B2319 BCG9842_B2319 2835070 2835213 + conserved hypothetical protein identified by match to protein family HMM PF09501%3B match to protein family HMM TIGR02413 gene gene2953 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2319 BCG9842_B2320 BCG9842_B2320 BCG9842_B2320 2834898 2835041 + conserved hypothetical protein identified by match to protein family HMM TIGR02413 gene gene2952 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2320 BCG9842_B2321 BCG9842_B2321 BCG9842_B2321 2834730 2834870 + conserved hypothetical protein identified by match to protein family HMM PF09501%3B match to protein family HMM TIGR02413 gene gene2951 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2321 BCG9842_B2322 BCG9842_B2322 BCG9842_B2322 2833694 2834287 - group-specific protein gene gene2950 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2322 BCG9842_B2323 BCG9842_B2323 BCG9842_B2323 2833192 2833680 - group-specific protein gene gene2949 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2323 BCG9842_B2324 BCG9842_B2324 BCG9842_B2324 2832686 2833066 - putative transcriptional regulator identified by match to protein family HMM PF00392 gene gene2948 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2324 BCG9842_B2325 BCG9842_B2325 BCG9842_B2325 2831817 2832689 - putative ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005 gene gene2947 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2325 BCG9842_B2326 BCG9842_B2326 BCG9842_B2326 2831149 2831820 - ABC transporter permease protein gene gene2946 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2326 BCG9842_B2327 BCG9842_B2327 BCG9842_B2327 2830630 2831109 - CcdC protein gene gene2945 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2327 BCG9842_B2328 BCG9842_B2328 BCG9842_B2328 2830003 2830512 - 2'-5' RNA ligase gene gene2944 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2328 BCG9842_B2329 BCG9842_B2329 coaA coaA 2829167 2829988 + pantothenate kinase identified by match to protein family HMM PF03630%3B match to protein family HMM TIGR00555 gene gene2943 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2329 BCG9842_B2330 BCG9842_B2330 BCG9842_B2330 2828682 2829080 + thioester dehydratase family%2C FabZ subfamily identified by match to protein family HMM PF07977 gene gene2942 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2330 BCG9842_B2331 BCG9842_B2331 BCG9842_B2331 2827426 2828625 + aminotransferase%2C classes I and II identified by match to protein family HMM PF00155 gene gene2941 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2331 BCG9842_B2332 BCG9842_B2332 BCG9842_B2332 2826769 2827131 + putative lipoprotein gene gene2940 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2332 BCG9842_B2333 BCG9842_B2333 BCG9842_B2333 2826300 2826599 + hypothetical protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by glimmer%3B putative gene gene2939 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2333 BCG9842_B2334 BCG9842_B2334 BCG9842_B2334 2824944 2826146 + putative transporter identified by match to protein family HMM PF07690 gene gene2938 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2334 BCG9842_B2335 BCG9842_B2335 BCG9842_B2335 2824724 2824837 - hypothetical protein identified by glimmer%3B putative gene gene2937 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2335 BCG9842_B2336 BCG9842_B2336 BCG9842_B2336 2824322 2824648 + exosporium protein C an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a premature stop gene gene2936 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2336 BCG9842_B2337 BCG9842_B2337 BCG9842_B2337 2823566 2823682 - hypothetical protein identified by glimmer%3B putative gene gene2935 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2337 BCG9842_B2338 BCG9842_B2338 BCG9842_B2338 2823047 2823415 - hypothetical protein identified by glimmer%3B putative gene gene2934 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2338 BCG9842_B2339 BCG9842_B2339 BCG9842_B2339 2822066 2822851 - methyltransferase%2C UbiE/COQ5 family identified by match to protein family HMM PF01209%3B match to protein family HMM PF08241%3B match to protein family HMM PF08242 gene gene2933 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2339 BCG9842_B2340 BCG9842_B2340 BCG9842_B2340 2821808 2821996 - hypothetical protein identified by glimmer%3B putative gene gene2932 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2340 BCG9842_B2341 BCG9842_B2341 BCG9842_B2341 2820765 2821730 - inosine-uridine preferring nucleoside hydrolase family protein identified by match to protein family HMM PF01156 gene gene2931 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2341 BCG9842_B2342 BCG9842_B2342 BCG9842_B2342 2820344 2820586 - conserved hypothetical protein identified by match to protein family HMM PF04226 gene gene2930 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2342 BCG9842_B2343 BCG9842_B2343 BCG9842_B2343 2819869 2820264 - hypothetical protein identified by glimmer%3B putative gene gene2929 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2343 BCG9842_B2344 BCG9842_B2344 BCG9842_B2344 2819462 2819608 - hypothetical protein identified by glimmer%3B putative gene gene2928 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2344 BCG9842_B2345 BCG9842_B2345 BCG9842_B2345 2818456 2819127 - conserved hypothetical protein gene gene2927 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2345 BCG9842_B2346 BCG9842_B2346 BCG9842_B2346 2817091 2818305 + peptide permease identified by match to protein family HMM PF07690 gene gene2926 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2346 BCG9842_B2347 BCG9842_B2347 BCG9842_B2347 2815253 2816989 - bacterial extracellular solute-binding protein%2C family 5 identified by match to protein family HMM PF00496 gene gene2925 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2347 BCG9842_B2348 BCG9842_B2348 BCG9842_B2348 2814469 2815092 - conserved hypothetical protein gene gene2924 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2348 BCG9842_B2349 BCG9842_B2349 BCG9842_B2349 2813745 2814455 - conserved hypothetical protein identified by match to protein family HMM PF04519 gene gene2923 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2349 BCG9842_B2350 BCG9842_B2350 BCG9842_B2350 2813019 2813726 - conserved hypothetical protein gene gene2922 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2350 BCG9842_B2351 BCG9842_B2351 BCG9842_B2351 2811481 2812995 - drug resistance transporter%2C EmrB/QacA family an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF07690%3B match to protein family HMM TIGR00711 gene gene2921 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2351 BCG9842_B2352 BCG9842_B2352 BCG9842_B2352 2811081 2811401 + hypothetical protein identified by glimmer%3B putative gene gene2920 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2352 BCG9842_B2353 BCG9842_B2353 BCG9842_B2353 2810049 2810828 - conserved hypothetical protein gene gene2919 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2353 BCG9842_B2354 BCG9842_B2354 BCG9842_B2354 2809022 2809792 - zwittermicin A resistance protein ZmaR identified by match to protein family HMM PF00583 gene gene2918 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2354 BCG9842_B2355 BCG9842_B2355 BCG9842_B2355 2808237 2808668 + acetyltransferase%2C GNAT family identified by match to protein family HMM PF00583 gene gene2917 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2355 BCG9842_B2356 BCG9842_B2356 BCG9842_B2356 2807031 2807579 - spore coat protein X identified by match to protein family HMM PF07552 gene gene2916 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2356 BCG9842_B2357 BCG9842_B2357 BCG9842_B2357 2806463 2806663 - conserved domain protein gene gene2915 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2357 BCG9842_B2358 BCG9842_B2358 BCG9842_B2358 2805996 2806448 - spore coat protein X identified by match to protein family HMM PF07552 gene gene2914 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2358 BCG9842_B2359 BCG9842_B2359 BCG9842_B2359 2804675 2805535 - degV family protein identified by match to protein family HMM PF02645%3B match to protein family HMM TIGR00762 gene gene2913 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2359 BCG9842_B2360 BCG9842_B2360 BCG9842_B2360 2802796 2804385 - peptidase%2C family M3 identified by match to protein family HMM PF01432 gene gene2912 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2360 BCG9842_B2361 BCG9842_B2361 BCG9842_B2361 2802034 2802783 - N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase identified by match to protein family HMM PF03808%3B match to protein family HMM TIGR00696 gene gene2911 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2361 BCG9842_B2362 BCG9842_B2362 BCG9842_B2362 2800616 2802016 - 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase identified by match to protein family HMM PF00702%3B match to protein family HMM PF01048%3B match to protein family HMM TIGR01704 gene gene2910 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2362 BCG9842_B2363 BCG9842_B2363 BCG9842_B2363 2800466 2800591 - acetyltransferase an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a premature stop gene gene2909 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2363 BCG9842_B2364 BCG9842_B2364 BCG9842_B2364 2800097 2800363 - acetyltransferase an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a premature stop gene gene2908 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2364 BCG9842_B2365 BCG9842_B2365 BCG9842_B2365 2799525 2799941 + hypothetical protein identified by glimmer%3B putative gene gene2907 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2365 BCG9842_B2366 BCG9842_B2366 BCG9842_B2366 2798756 2799403 - DNA-binding response regulator identified by match to protein family HMM PF00072%3B match to protein family HMM PF00486 gene gene2906 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2366 BCG9842_B2367 BCG9842_B2367 BCG9842_B2367 2797387 2798763 - putative sensor histidine kinase SrrB identified by match to protein family HMM PF00512%3B match to protein family HMM PF00672%3B match to protein family HMM PF02518 gene gene2905 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2367 BCG9842_B2368 BCG9842_B2368 BCG9842_B2368 2796355 2797197 - foldase protein PrsA identified by match to protein family HMM PF00639 gene gene2904 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2368 BCG9842_B2369 BCG9842_B2369 BCG9842_B2369 2794987 2796024 - Xaa-pro dipeptidyl-peptidase (x-pro dipeptidyl-peptidase) (x-prolyl-dipeptidyl aminopeptidase) (x-pdap) an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a premature stop%3B identified by match to protein family HMM PF02129 gene gene2903 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2369 BCG9842_B2370 BCG9842_B2370 BCG9842_B2370 2794726 2794965 - phage protein gene gene2902 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2370 BCG9842_B2371 BCG9842_B2371 BCG9842_B2371 2793233 2793550 - transglycosylase gene gene2901 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2371 BCG9842_B2372 BCG9842_B2372 BCG9842_B2372 2792815 2793216 - phage protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift gene gene2900 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2372 BCG9842_B2373 BCG9842_B2373 BCG9842_B2373 2792364 2792660 - phage protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift gene gene2899 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2373 BCG9842_B2374 BCG9842_B2374 BCG9842_B2374 2792215 2792361 - conserved domain protein gene gene2898 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2374 BCG9842_B2375 BCG9842_B2375 BCG9842_B2375 2791807 2792088 - transition state regulatory protein AbrB identified by match to protein family HMM PF04014 gene gene2897 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2375 BCG9842_B2376 BCG9842_B2376 BCG9842_B2376 2791416 2791805 - conserved domain protein gene gene2896 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2376 BCG9842_B2377 BCG9842_B2377 BCG9842_B2377 2790681 2791406 + hypothetical protein identified by glimmer%3B putative gene gene2895 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2377 BCG9842_B2378 BCG9842_B2378 BCG9842_B2378 2790375 2790557 - conserved domain protein gene gene2894 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2378 BCG9842_B2379 BCG9842_B2379 BCG9842_B2379 2789442 2790209 - hypothetical protein identified by glimmer%3B putative gene gene2893 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2379 BCG9842_B2380 BCG9842_B2380 BCG9842_B2380 2788678 2789082 - hypothetical protein identified by glimmer%3B putative gene gene2892 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2380 BCG9842_B2381 BCG9842_B2381 BCG9842_B2381 2787806 2787928 - phage protein gene gene2891 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2381 BCG9842_B2382 BCG9842_B2382 BCG9842_B2382 2786297 2786611 - hypothetical protein identified by glimmer%3B putative gene gene2890 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2382 BCG9842_B2383 BCG9842_B2383 BCG9842_B2383 2785800 2786228 - phage protein gene gene2889 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2383 BCG9842_B2384 BCG9842_B2384 BCG9842_B2384 2784068 2785783 - phage protein identified by match to protein family HMM TIGR01630 gene gene2888 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2384 BCG9842_B2385 BCG9842_B2385 BCG9842_B2385 2782534 2784051 - phage protein gene gene2887 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2385 BCG9842_B2386 BCG9842_B2386 BCG9842_B2386 2781690 2782460 - scaffold protein gene gene2886 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2386 BCG9842_B2387 BCG9842_B2387 BCG9842_B2387 2780505 2781629 - phage protein gene gene2885 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2387 BCG9842_B2388 BCG9842_B2388 BCG9842_B2388 2779972 2780406 - hypothetical protein identified by glimmer%3B putative gene gene2884 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2388 BCG9842_B2389 BCG9842_B2389 BCG9842_B2389 2779697 2779921 - conserved domain protein gene gene2883 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2389 BCG9842_B2390 BCG9842_B2390 BCG9842_B2390 2779327 2779668 - phage protein gene gene2882 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2390 BCG9842_B2391 BCG9842_B2391 BCG9842_B2391 2778516 2779322 - phage protein gene gene2881 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2391 BCG9842_B2392 BCG9842_B2392 BCG9842_B2392 2778138 2778512 - phage protein gene gene2880 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2392 BCG9842_B2393 BCG9842_B2393 BCG9842_B2393 2777779 2778138 - phage protein gene gene2879 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2393 BCG9842_B2394 BCG9842_B2394 BCG9842_B2394 2777369 2777776 - conserved hypothetical protein gene gene2878 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2394 BCG9842_B2395 BCG9842_B2395 BCG9842_B2395 2776852 2777355 - phage major tail protein%2C -1 family identified by match to protein family HMM TIGR02126 gene gene2877 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2395 BCG9842_B2396 BCG9842_B2396 BCG9842_B2396 2776460 2776801 - hypothetical protein identified by glimmer%3B putative gene gene2876 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2396 BCG9842_B2397 BCG9842_B2397 BCG9842_B2397 2776245 2776463 - conserved domain protein gene gene2875 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2397 BCG9842_B2398 BCG9842_B2398 BCG9842_B2398 2775797 2776174 - phage protein gene gene2874 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2398 BCG9842_B2399 BCG9842_B2399 BCG9842_B2399 2775453 2775707 - phage protein gene gene2873 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2399 BCG9842_B2400 BCG9842_B2400 BCG9842_B2400 2771523 2775416 - phage protein identified by match to protein family HMM TIGR01760 gene gene2872 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2400 BCG9842_B2401 BCG9842_B2401 BCG9842_B2401 2770009 2771508 - tail component protein identified by match to protein family HMM TIGR01633 gene gene2871 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2401 BCG9842_B2402 BCG9842_B2402 BCG9842_B2402 2765438 2770012 - structural protein identified by match to protein family HMM TIGR01665 gene gene2870 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2402 BCG9842_B2403 BCG9842_B2403 BCG9842_B2403 2765163 2765399 - conserved domain protein gene gene2869 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2403 BCG9842_B2404 BCG9842_B2404 BCG9842_B2404 2764924 2765163 - conserved domain protein gene gene2868 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2404 BCG9842_B2405 BCG9842_B2405 BCG9842_B2405 2763863 2764927 - N-acetylmuramoyl-L-alanine amidase identified by match to protein family HMM PF01510 gene gene2867 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2405 BCG9842_B2406 BCG9842_B2406 BCG9842_B2406 2761655 2763652 - KAP P-loop domain protein%2C putative identified by match to protein family HMM PF07693 gene gene2866 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2406 BCG9842_B2407 BCG9842_B2407 BCG9842_B2407 2760858 2761541 - conserved hypothetical protein gene gene2865 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2407 BCG9842_B2408 BCG9842_B2408 BCG9842_B2408 2760658 2760861 - hypothetical protein identified by glimmer%3B putative gene gene2864 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2408 BCG9842_B2409 BCG9842_B2409 BCG9842_B2409 2760291 2760620 + phage protein gene gene2863 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2409 BCG9842_B2410 BCG9842_B2410 BCG9842_B2410 2759975 2760214 + conserved domain protein gene gene2862 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2410 BCG9842_B2411 BCG9842_B2411 BCG9842_B2411 2759671 2759793 - conserved domain protein gene gene2861 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2411 BCG9842_B2412 BCG9842_B2412 BCG9842_B2412 2758834 2759034 + conserved domain protein identified by match to protein family HMM PF01381 gene gene2860 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2412 BCG9842_B2413 BCG9842_B2413 BCG9842_B2413 2758415 2758585 - phage protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift gene gene2859 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2413 BCG9842_B2414 BCG9842_B2414 BCG9842_B2414 2758073 2758375 - phage protein gene gene2858 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2414 BCG9842_B2415 BCG9842_B2415 BCG9842_B2415 2757894 2758076 - conserved domain protein gene gene2857 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2415 BCG9842_B2416 BCG9842_B2416 BCG9842_B2416 2756594 2757778 - ftsk/spoiiie family protein identified by match to protein family HMM PF01580 gene gene2856 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2416 BCG9842_B2417 BCG9842_B2417 BCG9842_B2417 2756029 2756616 - phage protein gene gene2855 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2417 BCG9842_B2418 BCG9842_B2418 BCG9842_B2418 2755609 2755788 - hypothetical protein identified by glimmer%3B putative gene gene2854 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2418 BCG9842_B2419 BCG9842_B2419 BCG9842_B2419 2755374 2755589 - hypothetical protein identified by glimmer%3B putative gene gene2853 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2419 BCG9842_B2420 BCG9842_B2420 BCG9842_B2420 2753635 2755074 - site-specific recombinase identified by match to protein family HMM PF00239%3B match to protein family HMM PF07508 gene gene2852 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2420 BCG9842_B2421 BCG9842_B2421 BCG9842_B2421 2752924 2753559 - X-prolyl-dipeptidyl aminopeptidase identified by match to protein family HMM PF08530 gene gene2851 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2421 BCG9842_B2422 BCG9842_B2422 BCG9842_B2422 2751935 2752696 - methyltransferase identified by match to protein family HMM PF08241%3B match to protein family HMM PF08242 gene gene2850 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2422 BCG9842_B2423 BCG9842_B2423 BCG9842_B2423 2751272 2751832 - conserved hypothetical protein gene gene2849 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2423 BCG9842_B2424 BCG9842_B2424 BCG9842_B2424 2750883 2751146 - hypothetical protein identified by glimmer%3B putative gene gene2848 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2424 BCG9842_B2425 BCG9842_B2425 BCG9842_B2425 2750383 2750613 - conserved domain protein gene gene2847 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2425 BCG9842_B2426 BCG9842_B2426 BCG9842_B2426 2749360 2749851 - ankyrin repeat protein identified by match to protein family HMM PF00023 gene gene2846 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2426 BCG9842_B2427 BCG9842_B2427 BCG9842_B2427 2748767 2749363 - transcriptional regulator%2C AraC family identified by match to protein family HMM PF01965 gene gene2845 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2427 BCG9842_B2428 BCG9842_B2428 BCG9842_B2428 2747821 2748747 + D-threo-aldose 1-dehydrogenase identified by match to protein family HMM PF00248 gene gene2844 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2428 BCG9842_B2429 BCG9842_B2429 divIC2 divIC2 2747180 2747536 - cell division protein DivIC identified by match to protein family HMM PF04977 gene gene2843 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2429 BCG9842_B2430 BCG9842_B2430 BCG9842_B2430 2746592 2746918 - conserved hypothetical protein gene gene2842 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2430 BCG9842_B2431 BCG9842_B2431 BCG9842_B2431 2745344 2746405 - mandelate racemase/muconate lactonizing enzyme family protein identified by match to protein family HMM PF01188%3B match to protein family HMM PF02746 gene gene2841 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2431 BCG9842_B2432 BCG9842_B2432 BCG9842_B2432 2744302 2745303 - NLP/P60 family protein identified by match to protein family HMM PF00877 gene gene2840 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2432 BCG9842_B2433 BCG9842_B2433 BCG9842_B2433 2742660 2744282 - putative oligopeptide ABC transporter%2C oligopeptide-binding protein identified by match to protein family HMM PF00496 gene gene2839 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2433 BCG9842_B2434 BCG9842_B2434 dltD2 dltD2 2741139 2742320 - dltD protein identified by match to protein family HMM PF04914%3B match to protein family HMM PF04915%3B match to protein family HMM PF04918 gene gene2838 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2434 BCG9842_B2435 BCG9842_B2435 BCG9842_B2435 2740874 2741098 + hypothetical protein identified by glimmer%3B putative gene gene2837 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2435 BCG9842_B2436 BCG9842_B2436 BCG9842_B2436 2740100 2740705 + dedA family protein identified by match to protein family HMM PF09335 gene gene2836 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2436 BCG9842_B2437 BCG9842_B2437 BCG9842_B2437 2738708 2739823 - HD domain protein identified by match to protein family HMM PF01966 gene gene2835 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2437 BCG9842_B2438 BCG9842_B2438 BCG9842_B2438 2737156 2738562 - GTP pyrophosphokinase identified by match to protein family HMM PF01966%3B match to protein family HMM PF02824 gene gene2834 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2438 BCG9842_B2439 BCG9842_B2439 BCG9842_B2439 2736199 2736963 + conserved hypothetical protein identified by match to protein family HMM PF08876 gene gene2833 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2439 BCG9842_B2440 BCG9842_B2440 BCG9842_B2440 2735491 2735940 - hypothetical protein identified by glimmer%3B putative gene gene2832 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2440 BCG9842_B2441 BCG9842_B2441 BCG9842_B2441 2735195 2735503 - conserved hypothetical protein gene gene2831 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2441 BCG9842_B2442 BCG9842_B2442 BCG9842_B2442 2733935 2735170 + putative sarcosine oxidase%2C alpha subunit identified by match to protein family HMM PF00070%3B match to protein family HMM PF01266%3B match to protein family HMM PF03486%3B match to protein family HMM PF07992 gene gene2830 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2442 BCG9842_B2443 BCG9842_B2443 BCG9842_B2443 2733606 2733938 + sarcosine oxidase alpha subunit an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift gene gene2829 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2443 BCG9842_B2444 BCG9842_B2444 BCG9842_B2444 2733337 2733609 + hypothetical protein identified by glimmer%3B putative gene gene2828 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2444 BCG9842_B2445 BCG9842_B2445 BCG9842_B2445 2731567 2733228 + sensory box sigma-54 dependent DNA-binding response regulator identified by match to protein family HMM PF00158%3B match to protein family HMM PF02954%3B match to protein family HMM PF07728%3B match to protein family HMM TIGR00229 gene gene2827 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2445 BCG9842_B2446 BCG9842_B2446 BCG9842_B2446 2730211 2731386 - putative glycine oxidase identified by match to protein family HMM PF01266 gene gene2826 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2446 BCG9842_B2447 BCG9842_B2447 BCG9842_B2447 2729177 2730214 - putative proline racemase identified by match to protein family HMM PF05544 gene gene2825 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2447 BCG9842_B2448 BCG9842_B2448 BCG9842_B2448 2728239 2729180 - hypothetical protein identified by glimmer%3B putative gene gene2824 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2448 BCG9842_B2449 BCG9842_B2449 dapA1 dapA1 2727320 2728216 - dihydrodipicolinate synthase identified by match to protein family HMM PF00701%3B match to protein family HMM TIGR00674 gene gene2823 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2449 BCG9842_B2450 BCG9842_B2450 BCG9842_B2450 2725818 2727302 - aldehyde dehydrogenase (NAD) family protein identified by match to protein family HMM PF00171 gene gene2822 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2450 BCG9842_B2451 BCG9842_B2451 BCG9842_B2451 2724198 2725688 - sodium/alanine symporter family protein identified by match to protein family HMM PF01235%3B match to protein family HMM TIGR00835 gene gene2821 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2451 BCG9842_B2452 BCG9842_B2452 BCG9842_B2452 2723733 2724098 - carboxymuconolactone decarboxylase identified by match to protein family HMM PF02627%3B match to protein family HMM TIGR00778 gene gene2820 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2452 BCG9842_B2453 BCG9842_B2453 BCG9842_B2453 2723025 2723666 + putative Metal-dependent phosphohydrolase identified by match to protein family HMM PF01966 gene gene2819 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2453 BCG9842_B2454 BCG9842_B2454 BCG9842_B2454 2722416 2722919 - acetyltransferase%2C GNAT family identified by match to protein family HMM PF00583 gene gene2818 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2454 BCG9842_B2455 BCG9842_B2455 BCG9842_B2455 2721517 2722182 - putative chitin binding protein identified by match to protein family HMM PF03067 gene gene2817 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2455 BCG9842_B2456 BCG9842_B2456 ppaC ppaC 2720427 2721356 - inorganic pyrophosphatase%2C manganese-dependent identified by match to protein family HMM PF01368%3B match to protein family HMM PF02833 gene gene2816 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2456 BCG9842_B2457 BCG9842_B2457 BCG9842_B2457 2719492 2720385 - peptidase M3 family protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF01432 gene gene2815 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2457 BCG9842_B2458 BCG9842_B2458 BCG9842_B2458 2719295 2719480 - peptidase M3 family protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift gene gene2814 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2458 BCG9842_B2459 BCG9842_B2459 BCG9842_B2459 2719078 2719266 + conserved hypothetical protein gene gene2813 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2459 BCG9842_B2460 BCG9842_B2460 BCG9842_B2460 2718387 2718836 - YfjM gene gene2812 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2460 BCG9842_B2461 BCG9842_B2461 BCG9842_B2461 2717463 2718197 - N-acetylmuramoyl-L-alanine amidase identified by match to protein family HMM PF01520 gene gene2811 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2461 BCG9842_B2462 BCG9842_B2462 BCG9842_B2462 2716297 2717127 - endolysin identified by match to protein family HMM PF01183 gene gene2810 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2462 BCG9842_B2463 BCG9842_B2463 BCG9842_B2463 2715453 2715905 + hypothetical protein identified by glimmer%3B putative gene gene2809 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2463 BCG9842_B2464 BCG9842_B2464 BCG9842_B2464 2714962 2715318 + hypothetical Cytosolic Protein gene gene2808 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2464 BCG9842_B2465 BCG9842_B2465 BCG9842_B2465 2714161 2714784 + hypothetical protein identified by glimmer%3B putative gene gene2807 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2465 BCG9842_B2466 BCG9842_B2466 recQ2 recQ2 2710922 2713039 - ATP-dependent DNA helicase RecQ identified by match to protein family HMM PF00270%3B match to protein family HMM PF00271%3B match to protein family HMM PF00570%3B match to protein family HMM PF09382%3B match to protein family HMM TIGR00614%3B match to protein family HMM TIGR01389 gene gene2806 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2466 BCG9842_B2467 BCG9842_B2467 BCG9842_B2467 2710513 2710896 - btrG family protein identified by match to protein family HMM PF06094 gene gene2805 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2467 BCG9842_B2468 BCG9842_B2468 BCG9842_B2468 2709587 2710330 - putative methyltransferase gene gene2804 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2468 BCG9842_B2469 BCG9842_B2469 BCG9842_B2469 2707281 2709356 - UvrD/Rep helicase family protein gene gene2803 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2469 BCG9842_B2470 BCG9842_B2470 BCG9842_B2470 2706575 2706967 + ribosomal-protein-alanine acetyltransferase identified by match to protein family HMM PF00583 gene gene2802 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2470 BCG9842_B2471 BCG9842_B2471 BCG9842_B2471 2705493 2706185 + conserved hypothetical protein gene gene2801 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2471 BCG9842_B2472 BCG9842_B2472 BCG9842_B2472 2705048 2705368 - conserved hypothetical protein identified by match to protein family HMM PF06108 gene gene2800 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2472 BCG9842_B2473 BCG9842_B2473 BCG9842_B2473 2704469 2704813 - conserved hypothetical protein identified by match to protein family HMM PF03551 gene gene2799 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2473 BCG9842_B2474 BCG9842_B2474 BCG9842_B2474 2703481 2704482 - putative membrane protein gene gene2798 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2474 BCG9842_B2475 BCG9842_B2475 BCG9842_B2475 2702888 2703400 - acetyltransferase%2C GNAT family identified by match to protein family HMM PF00583 gene gene2797 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2475 BCG9842_B2476 BCG9842_B2476 BCG9842_B2476 2701984 2702760 - hypothetical protein identified by glimmer%3B putative gene gene2796 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2476 BCG9842_B2477 BCG9842_B2477 BCG9842_B2477 2701733 2701987 - hypothetical protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by glimmer%3B putative gene gene2795 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2477 BCG9842_B2478 BCG9842_B2478 BCG9842_B2478 2701175 2701591 - acetyltransferase identified by match to protein family HMM PF00583 gene gene2794 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2478 BCG9842_B2479 BCG9842_B2479 BCG9842_B2479 2700625 2701029 - acetyltransferase%2C gnat family identified by match to protein family HMM PF00583 gene gene2793 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2479 BCG9842_B2480 BCG9842_B2480 BCG9842_B2480 2700256 2700609 - conserved domain protein identified by match to protein family HMM PF04237 gene gene2792 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2480 BCG9842_B2481 BCG9842_B2481 BCG9842_B2481 2699527 2700234 - ubiquinone/menaquinone biosynthesis methyltransferase ubie identified by match to protein family HMM PF01209%3B match to protein family HMM PF08241%3B match to protein family HMM PF08242 gene gene2791 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2481 BCG9842_B2482 BCG9842_B2482 BCG9842_B2482 2699075 2699461 - YjgA gene gene2790 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2482 BCG9842_B2483 BCG9842_B2483 BCG9842_B2483 2698121 2699050 - phosphotransferase enzyme family%2C putative identified by match to protein family HMM PF01636 gene gene2789 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2483 BCG9842_B2484 BCG9842_B2484 BCG9842_B2484 2697621 2698124 - topology modulation protein gene gene2788 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2484 BCG9842_B2485 BCG9842_B2485 BCG9842_B2485 2696779 2697459 - hypothetical Cytosolic Protein identified by match to protein family HMM PF03781 gene gene2787 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2485 BCG9842_B2486 BCG9842_B2486 BCG9842_B2486 2695493 2696686 - macrolide glycosyltransferase identified by match to protein family HMM PF00201%3B match to protein family HMM PF04101%3B match to protein family HMM TIGR01426 gene gene2786 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2486 BCG9842_B2487 BCG9842_B2487 BCG9842_B2487 2693672 2695039 - putative chitinase identified by match to protein family HMM PF00041%3B match to protein family HMM PF02839%3B match to protein family HMM PF03067 gene gene2785 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2487 BCG9842_B2488 BCG9842_B2488 BCG9842_B2488 2692899 2693363 + hypothetical protein identified by glimmer%3B putative gene gene2784 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2488 BCG9842_B2489 BCG9842_B2489 BCG9842_B2489 2691599 2692201 - conserved hypothetical protein gene gene2783 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2489 BCG9842_B2490 BCG9842_B2490 BCG9842_B2490 2690940 2691374 + acetyltransferase%2C GNAT family identified by match to protein family HMM PF00583 gene gene2782 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2490 BCG9842_B2491 BCG9842_B2491 rpiA rpiA 2690163 2690825 + ribose 5-phosphate isomerase A identified by match to protein family HMM PF06026%3B match to protein family HMM TIGR00021 gene gene2781 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2491 BCG9842_B2492 BCG9842_B2492 BCG9842_B2492 2689838 2690158 + ferredoxin identified by match to protein family HMM PF00111 gene gene2780 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2492 BCG9842_B2493 BCG9842_B2493 BCG9842_B2493 2689009 2689695 - RNA polymerase sigma-70 factor%2C ECF subfamily identified by match to protein family HMM PF04542%3B match to protein family HMM PF08281%3B match to protein family HMM TIGR02937 gene gene2779 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2493 BCG9842_B2494 BCG9842_B2494 clpP1 clpP1 2688406 2688987 - ATP-dependent Clp protease%2C proteolytic subunit ClpP identified by match to protein family HMM PF00574%3B match to protein family HMM TIGR00493 gene gene2778 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2494 BCG9842_B2495 BCG9842_B2495 BCG9842_B2495 2687506 2688363 + putative glycine betaine/L-proline ABC transporter%2C glycine betaine/L-proline-binding protein identified by match to protein family HMM PF04069 gene gene2777 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2495 BCG9842_B2496 BCG9842_B2496 proV2 proV2 2686129 2687334 - glycine betaine/L-proline ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005%3B match to protein family HMM PF00571%3B match to protein family HMM TIGR01186 gene gene2776 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2496 BCG9842_B2497 BCG9842_B2497 BCG9842_B2497 2685300 2686136 - glycine betaine/L-proline ABC transporter%2C permease protein identified by match to protein family HMM PF00528 gene gene2775 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2497 BCG9842_B2498 BCG9842_B2498 BCG9842_B2498 2685010 2685246 + conserved hypothetical protein gene gene2774 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2498 BCG9842_B2499 BCG9842_B2499 BCG9842_B2499 2684627 2684794 - hypothetical protein identified by glimmer%3B putative gene gene2773 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2499 BCG9842_B2500 BCG9842_B2500 BCG9842_B2500 2684035 2684514 - HIT family hydrolase identified by match to protein family HMM PF01230 gene gene2772 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2500 BCG9842_B2501 BCG9842_B2501 BCG9842_B2501 2683227 2684003 - hypothetical protein identified by glimmer%3B putative gene gene2771 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2501 BCG9842_B2502 BCG9842_B2502 BCG9842_B2502 2682838 2683203 - CpsH domain protein gene gene2770 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2502 BCG9842_B2503 BCG9842_B2503 BCG9842_B2503 2682370 2682807 - phosphohydrolase identified by match to protein family HMM PF00293 gene gene2769 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2503 BCG9842_B2504 BCG9842_B2504 BCG9842_B2504 2681963 2682076 - conserved hypothetical protein gene gene2768 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2504 BCG9842_B2505 BCG9842_B2505 BCG9842_B2505 2681348 2681857 + conserved hypothetical protein identified by match to protein family HMM PF04229 gene gene2767 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2505 BCG9842_B2506 BCG9842_B2506 BCG9842_B2506 2680432 2681307 + oxidoreductase%2C short-chain dehydrogenase/reductase family identified by match to protein family HMM PF00106%3B match to protein family HMM PF08659 gene gene2766 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2506 BCG9842_B2507 BCG9842_B2507 BCG9842_B2507 2679818 2680297 - conserved hypothetical protein gene gene2765 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2507 BCG9842_B2508 BCG9842_B2508 acoA acoA 2678650 2679648 - TPP-dependent acetoin dehydrogenase E1 alpha-subunit identified by match to protein family HMM PF00676 gene gene2764 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2508 BCG9842_B2509 BCG9842_B2509 acoB acoB 2677598 2678632 - TPP-dependent acetoin dehydrogenase E1 beta-subunit identified by match to protein family HMM PF02779%3B match to protein family HMM PF02780 gene gene2763 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2509 BCG9842_B2510 BCG9842_B2510 acoC acoC 2676371 2677570 - acetoin dehydrogenase%2C E2 component%2C dihydrolipoyllysine-residue acetyltransferase identified by match to protein family HMM PF00198%3B match to protein family HMM PF00364%3B match to protein family HMM PF02817 gene gene2762 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2510 BCG9842_B2511 BCG9842_B2511 acoL acoL 2674976 2676355 - acetoin dehydrogenase complex%2C dihydrolipoamide dehydrogenase component identified by match to protein family HMM PF00070%3B match to protein family HMM PF01134%3B match to protein family HMM PF02852%3B match to protein family HMM PF03486%3B match to protein family HMM PF07992%3B match to protein family HMM TIGR01350 gene gene2761 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2511 BCG9842_B2512 BCG9842_B2512 BCG9842_B2512 2674297 2674893 + hypothetical protein identified by glimmer%3B putative gene gene2760 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2512 BCG9842_B2513 BCG9842_B2513 BCG9842_B2513 2673453 2674076 - group-specific protein gene gene2759 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2513 BCG9842_B2514 BCG9842_B2514 BCG9842_B2514 2672966 2673367 - rrf2 family protein identified by match to protein family HMM PF02082%3B match to protein family HMM TIGR00738 gene gene2758 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2514 BCG9842_B2515 BCG9842_B2515 BCG9842_B2515 2672271 2672876 - conserved hypothetical protein identified by match to protein family HMM PF03848%3B match to protein family HMM PF08241%3B match to protein family HMM PF08242 gene gene2757 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2515 BCG9842_B2516 BCG9842_B2516 BCG9842_B2516 2671462 2672211 + putative lipoprotein gene gene2756 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2516 BCG9842_B2517 BCG9842_B2517 BCG9842_B2517 2670678 2671463 - transcriptional regulator%2C DeoR family identified by match to protein family HMM PF00455%3B match to protein family HMM PF08220%3B match to protein family HMM PF08279 gene gene2755 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2517 BCG9842_B2518 BCG9842_B2518 BCG9842_B2518 2670085 2670681 - acetyltransferase%2C GNAT family identified by match to protein family HMM PF00583 gene gene2754 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2518 BCG9842_B2519 BCG9842_B2519 BCG9842_B2519 2669774 2669989 - hypothetical protein identified by glimmer%3B putative gene gene2753 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2519 BCG9842_B2520 BCG9842_B2520 BCG9842_B2520 2669585 2669758 - hypothetical protein identified by glimmer%3B putative gene gene2752 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2520 BCG9842_B2521 BCG9842_B2521 BCG9842_B2521 2667612 2669462 - putative acetoin operon transcriptional activator identified by match to protein family HMM PF00158%3B match to protein family HMM PF01590%3B match to protein family HMM PF02954%3B match to protein family HMM PF07728 gene gene2751 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2521 BCG9842_B2522 BCG9842_B2522 BCG9842_B2522 2667240 2667497 - hypothetical protein identified by glimmer%3B putative gene gene2750 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2522 BCG9842_B2523 BCG9842_B2523 BCG9842_B2523 2666926 2667048 - phosphohydrolase an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts gene gene2749 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2523 BCG9842_B2524 BCG9842_B2524 BCG9842_B2524 2666466 2666765 - MutT/nudix family protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts gene gene2748 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2524 BCG9842_B2525 BCG9842_B2525 BCG9842_B2525 2665819 2666430 + transcriptional regulator%2C TetR family identified by match to protein family HMM PF00440 gene gene2747 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2525 BCG9842_B2526 BCG9842_B2526 kynU kynU 2664373 2665659 - kynureninase identified by match to protein family HMM PF00266%3B match to protein family HMM TIGR01814 gene gene2746 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2526 BCG9842_B2527 BCG9842_B2527 kynB kynB 2663741 2664370 - arylformamidase identified by match to protein family HMM PF04199%3B match to protein family HMM TIGR03035 gene gene2745 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2527 BCG9842_B2528 BCG9842_B2528 kynA kynA 2662869 2663708 - tryptophan 2%2C3-dioxygenase identified by match to protein family HMM PF03301%3B match to protein family HMM TIGR03036 gene gene2744 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2528 BCG9842_B2529 BCG9842_B2529 BCG9842_B2529 2661832 2662749 - beta-lactamase identified by match to protein family HMM PF00144 gene gene2743 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2529 BCG9842_B2530 BCG9842_B2530 BCG9842_B2530 2661192 2661815 - integral membrane protein gene gene2742 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2530 BCG9842_B2531 BCG9842_B2531 BCG9842_B2531 2660811 2661143 + conserved hypothetical protein gene gene2741 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2531 BCG9842_B2532 BCG9842_B2532 sleB sleB 2659904 2660665 - spore cortex-lytic enzyme prepeptide identified by match to protein family HMM PF01471%3B match to protein family HMM PF07486%3B match to protein family HMM TIGR02869 gene gene2740 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2532 BCG9842_B2533 BCG9842_B2533 ypeB ypeB 2658548 2659888 - germination protein YpeB identified by match to protein family HMM PF03413%3B match to protein family HMM TIGR02889 gene gene2739 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2533 BCG9842_B2534 BCG9842_B2534 BCG9842_B2534 2657925 2658521 - sporulation lipoprotein YhcN/YlaJ identified by match to protein family HMM PF09580%3B match to protein family HMM TIGR02898 gene gene2738 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2534 BCG9842_B2535 BCG9842_B2535 BCG9842_B2535 2657462 2657818 - putative lipoprotein gene gene2737 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2535 BCG9842_B2536 BCG9842_B2536 BCG9842_B2536 2656939 2657436 - acetyltransferase%2C GNAT family identified by match to protein family HMM PF00583 gene gene2736 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2536 BCG9842_B2537 BCG9842_B2537 BCG9842_B2537 2655779 2656834 - integral membrane protein identified by match to protein family HMM PF06081 gene gene2735 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2537 BCG9842_B2538 BCG9842_B2538 BCG9842_B2538 2655214 2655750 - conserved hypothetical protein identified by match to protein family HMM PF08002 gene gene2734 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2538 BCG9842_B2539 BCG9842_B2539 BCG9842_B2539 2654765 2655169 + hypothetical protein identified by glimmer%3B putative gene gene2733 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2539 BCG9842_B2540 BCG9842_B2540 BCG9842_B2540 2653386 2654555 - hypothetical protein identified by glimmer%3B putative gene gene2732 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2540 BCG9842_B2541 BCG9842_B2541 BCG9842_B2541 2653039 2653374 - group-specific protein gene gene2731 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2541 BCG9842_B2542 BCG9842_B2542 BCG9842_B2542 2652067 2652921 + hydrolase%2C alpha/beta fold family identified by match to protein family HMM PF00561 gene gene2730 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2542 BCG9842_B2543 BCG9842_B2543 BCG9842_B2543 2650208 2651641 + transcriptional regulator%2C GntR family identified by match to protein family HMM PF00155%3B match to protein family HMM PF00392 gene gene2729 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2543 BCG9842_B2544 BCG9842_B2544 BCG9842_B2544 2649142 2650059 - transporter%2C EamA family identified by match to protein family HMM PF00892%3B match to protein family HMM PF03151 gene gene2728 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2544 BCG9842_B2545 BCG9842_B2545 secY2 secY2 2647752 2649056 + preprotein translocase%2C SecY subunit identified by match to protein family HMM PF00344%3B match to protein family HMM TIGR00967 gene gene2727 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2545 BCG9842_B2546 BCG9842_B2546 BCG9842_B2546 2646930 2647397 + fosfomycin resistance protein identified by match to protein family HMM PF00903 gene gene2726 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2546 BCG9842_B2547 BCG9842_B2547 BCG9842_B2547 2646211 2646681 - transcriptional regulator%2C AraC family identified by match to protein family HMM PF06445 gene gene2725 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2547 BCG9842_B2548 BCG9842_B2548 BCG9842_B2548 2645601 2646116 - conserved hypothetical protein gene gene2724 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2548 BCG9842_B2549 BCG9842_B2549 BCG9842_B2549 2645492 2645617 - hypothetical protein identified by glimmer%3B putative gene gene2723 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2549 BCG9842_B2550 BCG9842_B2550 BCG9842_B2550 2643121 2645214 - conserved hypothetical protein identified by match to protein family HMM PF00149%3B match to protein family HMM PF02872 gene gene2722 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2550 BCG9842_B2551 BCG9842_B2551 BCG9842_B2551 2641084 2642787 - metalloendopeptidase identified by match to protein family HMM PF01447%3B match to protein family HMM PF02868%3B match to protein family HMM PF03413%3B match to protein family HMM PF07504 gene gene2721 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2551 BCG9842_B2552 BCG9842_B2552 BCG9842_B2552 2638044 2640602 - putative pullulanase identified by match to protein family HMM PF00128%3B match to protein family HMM PF02806%3B match to protein family HMM PF02922%3B match to protein family HMM PF03714%3B match to protein family HMM TIGR02104 gene gene2720 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2552 BCG9842_B2553 BCG9842_B2553 BCG9842_B2553 2636195 2637172 - conserved domain protein identified by match to protein family HMM TIGR03605 gene gene2719 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2553 BCG9842_B2554 BCG9842_B2554 BCG9842_B2554 2629146 2636162 - bacitracin synthetase 1 identified by match to protein family HMM PF00501%3B match to protein family HMM PF00550%3B match to protein family HMM PF00668%3B match to protein family HMM PF08415%3B match to protein family HMM TIGR01733 gene gene2718 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2554 BCG9842_B2555 BCG9842_B2555 BCG9842_B2555 2627636 2629090 - decarboxylase%2C pyridoxal-dependent identified by match to protein family HMM PF00282%3B match to protein family HMM PF01212 gene gene2717 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2555 BCG9842_B2556 BCG9842_B2556 BCG9842_B2556 2626571 2627527 + carboxylesterase identified by match to protein family HMM PF07859 gene gene2716 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2556 BCG9842_B2557 BCG9842_B2557 BCG9842_B2557 2624908 2625909 + YdjC gene gene2715 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2557 BCG9842_B2558 BCG9842_B2558 BCG9842_B2558 2622935 2624359 - ABC transporter%2C permease protein identified by match to protein family HMM PF02687 gene gene2714 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2558 BCG9842_B2559 BCG9842_B2559 BCG9842_B2559 2622246 2622923 - ABC transporter domain protein identified by match to protein family HMM PF00005 gene gene2713 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2559 BCG9842_B2560 BCG9842_B2560 BCG9842_B2560 2621764 2621946 + hypothetical protein identified by glimmer%3B putative gene gene2712 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2560 BCG9842_B2561 BCG9842_B2561 BCG9842_B2561 2621026 2621562 + hypothetical protein identified by glimmer%3B putative gene gene2711 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2561 BCG9842_B2562 BCG9842_B2562 BCG9842_B2562 2619259 2620698 + integral membrane sensor signal transduction histidine kinase identified by match to protein family HMM PF00512%3B match to protein family HMM PF00672%3B match to protein family HMM PF02518 gene gene2710 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2562 BCG9842_B2563 BCG9842_B2563 BCG9842_B2563 2618580 2619245 + transcriptional regulatory protein ResD identified by match to protein family HMM PF00072%3B match to protein family HMM PF00486 gene gene2709 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2563 BCG9842_B2564 BCG9842_B2564 BCG9842_B2564 2617369 2618136 - 2-haloalkanoic acid dehalogenase identified by match to protein family HMM PF00702%3B match to protein family HMM TIGR01509%3B match to protein family HMM TIGR01549 gene gene2708 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2564 BCG9842_B2565 BCG9842_B2565 BCG9842_B2565 2616870 2617238 - conserved hypothetical protein gene gene2707 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2565 BCG9842_B2566 BCG9842_B2566 BCG9842_B2566 2616258 2616761 - conserved hypothetical protein identified by match to protein family HMM PF08877 gene gene2706 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2566 BCG9842_B2567 BCG9842_B2567 BCG9842_B2567 2615351 2616118 - N-acetyltransferase family protein identified by match to protein family HMM PF00797 gene gene2705 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2567 BCG9842_B2568 BCG9842_B2568 BCG9842_B2568 2614445 2615098 - conserved domain protein gene gene2704 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2568 BCG9842_B2569 BCG9842_B2569 BCG9842_B2569 2613203 2614318 - oxidoreductase%2C DadA family identified by match to protein family HMM PF01266 gene gene2703 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2569 BCG9842_B2570 BCG9842_B2570 BCG9842_B2570 2612546 2612986 - mutT/nudix family protein identified by match to protein family HMM PF00293 gene gene2702 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2570 BCG9842_B2571 BCG9842_B2571 BCG9842_B2571 2611509 2612171 - conserved hypothetical protein gene gene2701 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2571 BCG9842_B2572 BCG9842_B2572 BCG9842_B2572 2611030 2611248 - conserved hypothetical protein gene gene2700 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2572 BCG9842_B2573 BCG9842_B2573 BCG9842_B2573 2609487 2610917 - transposase for insertion sequence element D identified by match to protein family HMM PF01609 gene gene2699 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2573 BCG9842_B2574 BCG9842_B2574 BCG9842_B2574 2608848 2609186 + glycosyltransferase%2C MGT family an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift gene gene2698 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2574 BCG9842_B2575 BCG9842_B2575 BCG9842_B2575 2608426 2608797 + glycosyltransferase%2C MGT family an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift gene gene2697 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2575 BCG9842_B2576 BCG9842_B2576 BCG9842_B2576 2606494 2607663 - putative D-alanyl-D-alanine carboxypeptidase identified by match to protein family HMM PF00144 gene gene2696 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2576 BCG9842_B2577 BCG9842_B2577 BCG9842_B2577 2604788 2606218 + transposase for insertion sequence element D identified by match to protein family HMM PF01609 gene gene2695 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2577 BCG9842_B2578 BCG9842_B2578 BCG9842_B2578 2604457 2604675 + conserved hypothetical protein gene gene2694 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2578 BCG9842_B2579 BCG9842_B2579 BCG9842_B2579 2604055 2604234 + hypothetical protein identified by glimmer%3B putative gene gene2693 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2579 BCG9842_B2580 BCG9842_B2580 BCG9842_B2580 2603706 2603963 + hypothetical protein identified by glimmer%3B putative gene gene2692 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2580 BCG9842_B2581 BCG9842_B2581 BCG9842_B2581 2602138 2603568 - conserved domain protein gene gene2691 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2581 BCG9842_B2582 BCG9842_B2582 BCG9842_B2582 2601543 2601950 - group-specific protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift gene gene2690 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2582 BCG9842_B2583 BCG9842_B2583 BCG9842_B2583 2600846 2601409 - acetyltransferase%2C GNAT family identified by match to protein family HMM PF00583 gene gene2689 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2583 BCG9842_B2584 BCG9842_B2584 BCG9842_B2584 2600388 2600768 - GIY-YIG catalytic domain protein identified by match to protein family HMM PF01541 gene gene2688 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2584 BCG9842_B2585 BCG9842_B2585 BCG9842_B2585 2600124 2600330 + hypothetical protein identified by glimmer%3B putative gene gene2687 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2585 BCG9842_B2586 BCG9842_B2586 BCG9842_B2586 2599212 2599991 - putative bacitracin resistance protein identified by match to protein family HMM PF02673 gene gene2686 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2586 BCG9842_B2587 BCG9842_B2587 BCG9842_B2587 2597807 2599129 - conserved hypothetical protein gene gene2685 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2587 BCG9842_B2588 BCG9842_B2588 BCG9842_B2588 2597216 2597743 - acetyltransferase%2C GNAT family identified by match to protein family HMM PF00583 gene gene2684 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2588 BCG9842_B2589 BCG9842_B2589 BCG9842_B2589 2596678 2597199 - conserved hypothetical protein gene gene2683 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2589 BCG9842_B2590 BCG9842_B2590 BCG9842_B2590 2596512 2596676 - acetyltransferase%2C GNAT family an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift gene gene2682 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2590 BCG9842_B2591 BCG9842_B2591 BCG9842_B2591 2596189 2596407 - acetyltransferase%2C gnat family an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift gene gene2681 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2591 BCG9842_B2592 BCG9842_B2592 BCG9842_B2592 2595690 2596067 + conserved hypothetical protein identified by match to protein family HMM PF08000 gene gene2680 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2592 BCG9842_B2593 BCG9842_B2593 BCG9842_B2593 2594659 2595510 - putative phospholipase identified by match to protein family HMM PF01734 gene gene2679 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2593 BCG9842_B2594 BCG9842_B2594 BCG9842_B2594 2594275 2594646 - group-specific protein gene gene2678 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2594 BCG9842_B2595 BCG9842_B2595 BCG9842_B2595 2593629 2593994 - hypothetical protein identified by glimmer%3B putative gene gene2677 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2595 BCG9842_B2596 BCG9842_B2596 BCG9842_B2596 2593148 2593273 - probable esterase an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a premature stop gene gene2676 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2596 BCG9842_B2597 BCG9842_B2597 BCG9842_B2597 2592659 2593066 - conserved domain protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a premature stop%3B identified by match to protein family HMM PF09350 gene gene2675 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2597 BCG9842_B2598 BCG9842_B2598 BCG9842_B2598 2591765 2592580 - conserved hypothetical protein identified by match to protein family HMM PF09234 gene gene2674 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2598 BCG9842_B2599 BCG9842_B2599 BCG9842_B2599 2590647 2591042 + putative endoribonuclease L-PSP identified by match to protein family HMM PF01042 gene gene2673 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2599 BCG9842_B2600 BCG9842_B2600 BCG9842_B2600 2589499 2590494 + conserved hypothetical protein gene gene2672 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2600 BCG9842_B2601 BCG9842_B2601 BCG9842_B2601 2588240 2589202 - outer membrane protein RomA gene gene2671 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2601 BCG9842_B2602 BCG9842_B2602 BCG9842_B2602 2587240 2588178 + hypothetical protein identified by glimmer%3B putative gene gene2670 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2602 BCG9842_B2603 BCG9842_B2603 BCG9842_B2603 2586678 2587142 + mutT/nudix family protein identified by match to protein family HMM PF00293 gene gene2669 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2603 BCG9842_B2604 BCG9842_B2604 dnaN2 dnaN2 2585477 2586607 + DNA polymerase III%2C beta subunit identified by match to protein family HMM PF00712%3B match to protein family HMM PF02767%3B match to protein family HMM PF02768%3B match to protein family HMM TIGR00663 gene gene2668 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2604 BCG9842_B2605 BCG9842_B2605 BCG9842_B2605 2585003 2585446 + mutT/nudix family protein identified by match to protein family HMM PF00293 gene gene2667 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2605 BCG9842_B2606 BCG9842_B2606 BCG9842_B2606 2584296 2584721 + acetyltransferase identified by match to protein family HMM PF00583 gene gene2666 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2606 BCG9842_B2607 BCG9842_B2607 BCG9842_B2607 2582957 2584165 + putative oxalate:formate antiporter identified by match to protein family HMM PF07690 gene gene2665 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2607 BCG9842_B2608 BCG9842_B2608 BCG9842_B2608 2582533 2582676 + hypothetical protein identified by glimmer%3B putative gene gene2664 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2608 BCG9842_B2609 BCG9842_B2609 BCG9842_B2609 2581485 2582501 + conserved hypothetical protein identified by match to protein family HMM PF00144 gene gene2663 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2609 BCG9842_B2610 BCG9842_B2610 BCG9842_B2610 2581123 2581383 + hypothetical protein identified by glimmer%3B putative gene gene2662 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2610 BCG9842_B2611 BCG9842_B2611 BCG9842_B2611 2580477 2580923 + mutT/nudix family protein identified by match to protein family HMM PF00293 gene gene2661 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2611 BCG9842_B2612 BCG9842_B2612 BCG9842_B2612 2580113 2580460 + CutA1 divalent ion tolerance protein gene gene2660 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2612 BCG9842_B2613 BCG9842_B2613 BCG9842_B2613 2579624 2580082 + acetyltransferase%2C GNAT family identified by match to protein family HMM PF00583 gene gene2659 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2613 BCG9842_B2614 BCG9842_B2614 BCG9842_B2614 2578623 2579546 + hypothetical protein identified by glimmer%3B putative gene gene2658 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2614 BCG9842_B2615 BCG9842_B2615 BCG9842_B2615 2577099 2578460 + chitosanase identified by match to protein family HMM PF01270 gene gene2657 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2615 BCG9842_B2616 BCG9842_B2616 BCG9842_B2616 2576046 2576960 + transporter%2C EamA family identified by match to protein family HMM PF00892 gene gene2656 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2616 BCG9842_B2617 BCG9842_B2617 BCG9842_B2617 2574461 2575894 - transcriptional regulator%2C GntR family identified by match to protein family HMM PF00155%3B match to protein family HMM PF00392 gene gene2655 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2617 BCG9842_B2618 BCG9842_B2618 BCG9842_B2618 2573886 2574416 + conserved hypothetical protein gene gene2654 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2618 BCG9842_B2619 BCG9842_B2619 BCG9842_B2619 2573250 2573711 - conserved hypothetical protein gene gene2653 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2619 BCG9842_B2620 BCG9842_B2620 BCG9842_B2620 2572271 2573116 + L-alanyl-D-glutamate peptidase identified by match to protein family HMM PF02557%3B match to protein family HMM PF08239 gene gene2652 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2620 BCG9842_B2621 BCG9842_B2621 BCG9842_B2621 2572104 2572274 + conserved hypothetical protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift gene gene2651 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2621 BCG9842_B2622 BCG9842_B2622 BCG9842_B2622 2571111 2571986 + glycerophosphoryl diester phosphodiesterase identified by match to protein family HMM PF03009 gene gene2650 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2622 BCG9842_B2623 BCG9842_B2623 BCG9842_B2623 2570265 2571065 + acetyltransferase%2C GNAT family identified by match to protein family HMM PF00583 gene gene2649 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2623 BCG9842_B2624 BCG9842_B2624 BCG9842_B2624 2569050 2569808 - hypothetical protein identified by glimmer%3B putative gene gene2648 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2624 BCG9842_B2625 BCG9842_B2625 BCG9842_B2625 2567715 2569010 + tetracycline resistance determinant TetV identified by match to protein family HMM PF07690 gene gene2647 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2625 BCG9842_B2626 BCG9842_B2626 BCG9842_B2626 2566379 2567602 + conserved domain protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF00376%3B match to protein family HMM PF08241 gene gene2646 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2626 BCG9842_B2627 BCG9842_B2627 BCG9842_B2627 2565449 2565874 + conserved hypothetical protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift gene gene2645 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2627 BCG9842_B2628 BCG9842_B2628 BCG9842_B2628 2564349 2565155 + degV family protein identified by match to protein family HMM PF02645%3B match to protein family HMM TIGR00762 gene gene2644 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2628 BCG9842_B2629 BCG9842_B2629 BCG9842_B2629 2563642 2564148 + conserved hypothetical protein gene gene2643 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2629 BCG9842_B2630 BCG9842_B2630 BCG9842_B2630 2563107 2563562 + conserved hypothetical protein gene gene2642 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2630 BCG9842_B2631 BCG9842_B2631 BCG9842_B2631 2562284 2562916 + teicoplanin resistance protein VanZ identified by match to protein family HMM PF04892 gene gene2641 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2631 BCG9842_B2632 BCG9842_B2632 BCG9842_B2632 2561034 2562059 + penicillin-binding protein identified by match to protein family HMM PF00144 gene gene2640 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2632 BCG9842_B2633 BCG9842_B2633 BCG9842_B2633 2559589 2560821 + putative permease identified by match to protein family HMM PF07690 gene gene2639 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2633 BCG9842_B2634 BCG9842_B2634 BCG9842_B2634 2556950 2559088 + penicillin-binding protein identified by match to protein family HMM PF00905%3B match to protein family HMM PF03717%3B match to protein family HMM PF03793 gene gene2638 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2634 BCG9842_B2635 BCG9842_B2635 BCG9842_B2635 2556061 2556660 + bacitracin transport permease protein bcrc identified by match to protein family HMM PF01569 gene gene2637 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2635 BCG9842_B2636 BCG9842_B2636 BCG9842_B2636 2554825 2555814 + alcohol dehydrogenase identified by match to protein family HMM PF00107%3B match to protein family HMM PF08240 gene gene2636 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2636 BCG9842_B2637 BCG9842_B2637 BCG9842_B2637 2554146 2554649 + glutamate-rich protein GrpB identified by match to protein family HMM PF04229 gene gene2635 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2637 BCG9842_B2638 BCG9842_B2638 BCG9842_B2638 2553136 2554017 - conserved hypothetical protein gene gene2634 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2638 BCG9842_B2639 BCG9842_B2639 BCG9842_B2639 2552056 2552625 - conserved hypothetical protein gene gene2633 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2639 BCG9842_B2640 BCG9842_B2640 BCG9842_B2640 2551047 2551517 + mutt/nudix family protein identified by match to protein family HMM PF00293 gene gene2632 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2640 BCG9842_B2641 BCG9842_B2641 BCG9842_B2641 2548518 2549804 - amino acid permease family protein identified by match to protein family HMM PF00324%3B match to protein family HMM PF03845 gene gene2631 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2641 BCG9842_B2642 BCG9842_B2642 BCG9842_B2642 2547938 2548534 - transcriptional regulator%2C AraC family identified by match to protein family HMM PF00165%3B match to protein family HMM PF02805 gene gene2630 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2642 BCG9842_B2643 BCG9842_B2643 BCG9842_B2643 2547200 2547673 - conserved hypothetical protein gene gene2629 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2643 BCG9842_B2644 BCG9842_B2644 BCG9842_B2644 2546934 2547059 - transposase an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift gene gene2628 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2644 BCG9842_B2645 BCG9842_B2645 BCG9842_B2645 2546064 2546423 + conserved hypothetical protein gene gene2627 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2645 BCG9842_B2646 BCG9842_B2646 BCG9842_B2646 2545799 2545960 + conserved domain protein gene gene2626 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2646 BCG9842_B2647 BCG9842_B2647 BCG9842_B2647 2545484 2545681 + conserved hypothetical protein gene gene2625 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2647 BCG9842_B2648 BCG9842_B2648 BCG9842_B2648 2544623 2544781 + conserved hypothetical protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a premature stop gene gene2624 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2648 BCG9842_B2649 BCG9842_B2649 BCG9842_B2649 2544330 2544590 + hypothetical protein identified by glimmer%3B putative gene gene2623 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2649 BCG9842_B2650 BCG9842_B2650 BCG9842_B2650 2543284 2543748 - conserved hypothetical protein gene gene2622 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2650 BCG9842_B2651 BCG9842_B2651 BCG9842_B2651 2542522 2542776 - hypothetical protein identified by glimmer%3B putative gene gene2621 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2651 BCG9842_B2652 BCG9842_B2652 BCG9842_B2652 2542329 2542460 + hypothetical protein identified by glimmer%3B putative gene gene2620 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2652 BCG9842_B2653 BCG9842_B2653 BCG9842_B2653 2541885 2542160 + hypothetical protein identified by glimmer%3B putative gene gene2619 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2653 BCG9842_B2654 BCG9842_B2654 BCG9842_B2654 2541358 2541570 - DNA integration/recombination/invertion protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift gene gene2618 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2654 BCG9842_B2655 BCG9842_B2655 kinB2 kinB2 2539974 2541233 - sporulation kinase B identified by match to protein family HMM PF00512%3B match to protein family HMM PF02518%3B match to protein family HMM PF07694 gene gene2617 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2655 BCG9842_B2656 BCG9842_B2656 BCG9842_B2656 2539721 2539873 + conserved hypothetical protein identified by match to protein family HMM PF09680%3B match to protein family HMM TIGR01732 gene gene2616 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2656 BCG9842_B2657 BCG9842_B2657 BCG9842_B2657 2538829 2539629 + cobalt transport protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a premature stop%3B identified by match to protein family HMM PF02361 gene gene2615 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2657 BCG9842_B2658 BCG9842_B2658 BCG9842_B2658 2537136 2538836 + ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005 gene gene2614 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2658 BCG9842_B2659 BCG9842_B2659 BCG9842_B2659 2536577 2537125 + putative membrane protein identified by match to protein family HMM PF07155 gene gene2613 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2659 BCG9842_B2661 BCG9842_B2661 BCG9842_B2661 2535487 2536167 - aspartate racemase family protein identified by match to protein family HMM PF01177%3B match to protein family HMM TIGR00035 gene gene2612 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2661 BCG9842_B2662 BCG9842_B2662 BCG9842_B2662 2534208 2535395 + glycosyl transferase identified by match to protein family HMM PF00201%3B match to protein family HMM PF04101%3B match to protein family HMM TIGR01426 gene gene2611 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2662 BCG9842_B2663 BCG9842_B2663 lepB_2 lepB_2 2533418 2533948 + signal peptidase I identified by match to protein family HMM PF00717%3B match to protein family HMM TIGR02227 gene gene2610 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2663 BCG9842_B2664 BCG9842_B2664 BCG9842_B2664 2531215 2533341 + penicillin-binding Protein dimerisation domain family identified by match to protein family HMM PF00905%3B match to protein family HMM PF03717 gene gene2609 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2664 BCG9842_B2665 BCG9842_B2665 BCG9842_B2665 2529208 2530980 + sensor histidine kinase identified by match to protein family HMM PF00512%3B match to protein family HMM PF00989%3B match to protein family HMM PF02518%3B match to protein family HMM PF08448%3B match to protein family HMM TIGR00229 gene gene2608 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2665 BCG9842_B2666 BCG9842_B2666 BCG9842_B2666 2527919 2528770 + hydrolase%2C haloacid dehalogenase-like family identified by match to protein family HMM PF00702%3B match to protein family HMM PF05116%3B match to protein family HMM PF08282%3B match to protein family HMM TIGR00099%3B match to protein family HMM TIGR01484 gene gene2607 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2666 BCG9842_B2667 BCG9842_B2667 BCG9842_B2667 2527166 2527744 + conserved hypothetical protein identified by match to protein family HMM PF05995 gene gene2606 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2667 BCG9842_B2668 BCG9842_B2668 BCG9842_B2668 2525843 2527057 + cytochrome P450 family protein identified by match to protein family HMM PF00067 gene gene2605 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2668 BCG9842_B2669 BCG9842_B2669 BCG9842_B2669 2525205 2525702 - conserved hypothetical protein identified by match to protein family HMM PF03551 gene gene2604 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2669 BCG9842_B2670 BCG9842_B2670 BCG9842_B2670 2524947 2525102 + conserved hypothetical protein identified by match to protein family HMM PF07561 gene gene2603 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2670 BCG9842_B2671 BCG9842_B2671 BCG9842_B2671 2524244 2524876 + acetyltransferase%2C CYSE/LACA/LPXA/NODL family identified by match to protein family HMM PF00132 gene gene2602 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2671 BCG9842_B2672 BCG9842_B2672 BCG9842_B2672 2522971 2524254 + putative permease identified by match to protein family HMM PF07690 gene gene2601 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2672 BCG9842_B2673 BCG9842_B2673 cypA cypA 2521469 2522704 + cytochrome P450 identified by match to protein family HMM PF00067 gene gene2600 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2673 BCG9842_B2674 BCG9842_B2674 BCG9842_B2674 2520904 2521308 + hypothetical protein identified by glimmer%3B putative gene gene2599 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2674 BCG9842_B2675 BCG9842_B2675 BCG9842_B2675 2519753 2520757 + conserved hypothetical protein identified by match to protein family HMM PF08874 gene gene2598 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2675 BCG9842_B2676 BCG9842_B2676 BCG9842_B2676 2518799 2519002 + hypothetical protein identified by glimmer%3B putative gene gene2597 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2676 BCG9842_B2677 BCG9842_B2677 BCG9842_B2677 2518260 2518676 + hypothetical Membrane Spanning Protein gene gene2596 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2677 BCG9842_B2678 BCG9842_B2678 BCG9842_B2678 2517348 2518115 + conserved hypothetical protein gene gene2595 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2678 BCG9842_B2679 BCG9842_B2679 BCG9842_B2679 2517213 2517332 + hypothetical protein identified by glimmer%3B putative gene gene2594 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2679 BCG9842_B2680 BCG9842_B2680 BCG9842_B2680 2515596 2517140 + conserved hypothetical protein gene gene2593 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2680 BCG9842_B2681 BCG9842_B2681 BCG9842_B2681 2515412 2515540 - hypothetical protein identified by glimmer%3B putative gene gene2592 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2681 BCG9842_B2682 BCG9842_B2682 BCG9842_B2682 2514229 2515086 + conserved hypothetical protein gene gene2591 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2682 BCG9842_B2683 BCG9842_B2683 BCG9842_B2683 2513402 2514103 + conserved hypothetical protein gene gene2590 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2683 BCG9842_B2684 BCG9842_B2684 BCG9842_B2684 2512187 2513122 + prophage LambdaBa01%2C N-acetylmuramoyl-L-alanine amidase%2C family 2 identified by match to protein family HMM PF01510%3B match to protein family HMM PF08239 gene gene2589 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2684 BCG9842_B2685 BCG9842_B2685 BCG9842_B2685 2511762 2512187 + putative prophage LambdaBa02%2C holin identified by match to protein family HMM PF05105%3B match to protein family HMM TIGR01593 gene gene2588 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2685 BCG9842_B2686 BCG9842_B2686 BCG9842_B2686 2507088 2511722 + phage minor structural protein identified by match to protein family HMM PF02018%3B match to protein family HMM TIGR01665 gene gene2587 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2686 BCG9842_B2687 BCG9842_B2687 BCG9842_B2687 2505616 2507091 + phage tail fiber protein identified by match to protein family HMM TIGR01633 gene gene2586 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2687 BCG9842_B2688 BCG9842_B2688 BCG9842_B2688 2503409 2505574 + phage protein gene gene2585 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2688 BCG9842_B2689 BCG9842_B2689 BCG9842_B2689 2502934 2503191 + prophage LambdaBa04%2C tape measure protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts gene gene2584 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2689 BCG9842_B2691 BCG9842_B2691 BCG9842_B2691 2501469 2502680 + TMP repeat protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts gene gene2583 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2691 BCG9842_B2692 BCG9842_B2692 BCG9842_B2692 2501292 2501453 + conserved domain protein gene gene2582 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2692 BCG9842_B2693 BCG9842_B2693 BCG9842_B2693 2500876 2501238 + putative prophage pi2 protein 40 gene gene2581 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2693 BCG9842_B2694 BCG9842_B2694 BCG9842_B2694 2500284 2500871 + prophage pi2 protein 39 identified by match to protein family HMM TIGR01603 gene gene2580 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2694 BCG9842_B2695 BCG9842_B2695 BCG9842_B2695 2499954 2500283 + prophage pi2 protein 38 gene gene2579 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2695 BCG9842_B2696 BCG9842_B2696 BCG9842_B2696 2499613 2499954 + prophage pi2 protein 37 gene gene2578 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2696 BCG9842_B2697 BCG9842_B2697 BCG9842_B2697 2499258 2499611 + phage head-tail adaptor%2C putative identified by match to protein family HMM TIGR01563 gene gene2577 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2697 BCG9842_B2698 BCG9842_B2698 BCG9842_B2698 2498963 2499256 + gp7 gene gene2576 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2698 BCG9842_B2699 BCG9842_B2699 BCG9842_B2699 2497803 2498957 + Cps gene gene2575 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2699 BCG9842_B2700 BCG9842_B2700 BCG9842_B2700 2497017 2497799 + phage protein identified by match to protein family HMM PF00574 gene gene2574 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2700 BCG9842_B2701 BCG9842_B2701 BCG9842_B2701 2495972 2497033 + phage portal protein%2C HK97 family identified by match to protein family HMM PF04860%3B match to protein family HMM TIGR01537 gene gene2573 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2701 BCG9842_B2702 BCG9842_B2702 BCG9842_B2702 2494209 2495864 + putative phage terminase%2C large subunit identified by match to protein family HMM PF03354 gene gene2572 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2702 BCG9842_B2703 BCG9842_B2703 BCG9842_B2703 2494009 2494212 + conserved hypothetical protein gene gene2571 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2703 BCG9842_B2704 BCG9842_B2704 BCG9842_B2704 2493526 2493738 + hypothetical protein identified by glimmer%3B putative gene gene2570 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2704 BCG9842_B2705 BCG9842_B2705 BCG9842_B2705 2493188 2493523 + gp65 identified by match to protein family HMM PF01844 gene gene2569 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2705 BCG9842_B2706 BCG9842_B2706 BCG9842_B2706 2492763 2493191 + hypothetical phage protein gene gene2568 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2706 BCG9842_B2707 BCG9842_B2707 BCG9842_B2707 2492413 2492628 + conserved domain protein gene gene2567 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2707 BCG9842_B2708 BCG9842_B2708 BCG9842_B2708 2492102 2492416 + phage protein gene gene2566 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2708 BCG9842_B2709 BCG9842_B2709 BCG9842_B2709 2490954 2491709 + conserved hypothetical protein gene gene2565 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2709 BCG9842_B2710 BCG9842_B2710 BCG9842_B2710 2489901 2490527 - conserved hypothetical protein gene gene2564 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2710 BCG9842_B2711 BCG9842_B2711 BCG9842_B2711 2489104 2489646 + prophage LambdaBa04%2C site-specific recombinase%2C phage integrase family identified by match to protein family HMM PF00589 gene gene2563 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2711 BCG9842_B2712 BCG9842_B2712 BCG9842_B2712 2488622 2489104 + phage transcriptional regulator%2C ArpU family identified by match to protein family HMM TIGR01637 gene gene2562 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2712 BCG9842_B2713 BCG9842_B2713 BCG9842_B2713 2488424 2488594 + hypothetical protein identified by glimmer%3B putative gene gene2561 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2713 BCG9842_B2714 BCG9842_B2714 BCG9842_B2714 2487787 2488263 + conserved hypothetical protein gene gene2560 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2714 BCG9842_B2715 BCG9842_B2715 BCG9842_B2715 2486502 2487623 + transposase identified by match to protein family HMM PF01385%3B match to protein family HMM PF07282%3B match to protein family HMM TIGR01766 gene gene2559 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2715 BCG9842_B2716 BCG9842_B2716 BCG9842_B2716 2485671 2486243 - cupin domain protein identified by match to protein family HMM PF07883 gene gene2558 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2716 BCG9842_B2717 BCG9842_B2717 BCG9842_B2717 2484441 2485043 + conserved hypothetical protein gene gene2557 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2717 BCG9842_B2718 BCG9842_B2718 BCG9842_B2718 2483190 2484311 + transposase identified by match to protein family HMM PF01385%3B match to protein family HMM PF07282%3B match to protein family HMM TIGR01766 gene gene2556 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2718 BCG9842_B2719 BCG9842_B2719 BCG9842_B2719 2482459 2482764 + hypothetical phage protein gene gene2555 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2719 BCG9842_B2720 BCG9842_B2720 BCG9842_B2720 2481775 2482284 + dUTPase identified by match to protein family HMM PF08761 gene gene2554 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2720 BCG9842_B2721 BCG9842_B2721 BCG9842_B2721 2481275 2481748 + hypothetical protein identified by glimmer%3B putative gene gene2553 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2721 BCG9842_B2722 BCG9842_B2722 BCG9842_B2722 2481085 2481249 + conserved domain protein gene gene2552 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2722 BCG9842_B2723 BCG9842_B2723 BCG9842_B2723 2480706 2481065 + conserved hypothetical protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift gene gene2551 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2723 BCG9842_B2724 BCG9842_B2724 BCG9842_B2724 2480435 2480713 + transition state regulatory protein AbrB identified by match to protein family HMM PF04014%3B match to protein family HMM TIGR01439 gene gene2550 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2724 BCG9842_B2725 BCG9842_B2725 BCG9842_B2725 2479367 2480431 + primosome%2C DnaD subunit identified by match to protein family HMM PF04271%3B match to protein family HMM TIGR01446 gene gene2549 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2725 BCG9842_B2726 BCG9842_B2726 BCG9842_B2726 2479145 2479309 + conserved domain protein gene gene2548 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2726 BCG9842_B2727 BCG9842_B2727 BCG9842_B2727 2478879 2479145 + DNA binding domain%2C excisionase family protein identified by match to protein family HMM TIGR01764 gene gene2547 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2727 BCG9842_B2728 BCG9842_B2728 BCG9842_B2728 2478700 2478822 + Xre gene gene2546 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2728 BCG9842_B2729 BCG9842_B2729 BCG9842_B2729 2477518 2478639 + transposase identified by match to protein family HMM PF01385%3B match to protein family HMM PF07282%3B match to protein family HMM TIGR01766 gene gene2545 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2729 BCG9842_B2730 BCG9842_B2730 BCG9842_B2730 2476681 2477034 - putative DNA-binding protein identified by match to protein family HMM PF01381 gene gene2544 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2730 BCG9842_B2731 BCG9842_B2731 BCG9842_B2731 2476515 2476643 + hypothetical protein identified by glimmer%3B putative gene gene2543 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2731 BCG9842_B2732 BCG9842_B2732 BCG9842_B2732 2476213 2476359 + hypothetical protein identified by glimmer%3B putative gene gene2542 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2732 BCG9842_B2733 BCG9842_B2733 BCG9842_B2733 2475024 2476175 + conserved hypothetical protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift gene gene2541 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2733 BCG9842_B2734 BCG9842_B2734 BCG9842_B2734 2473370 2474479 - DNA integration/recombination/invertion protein identified by match to protein family HMM PF00589 gene gene2540 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2734 BCG9842_B2735 BCG9842_B2735 BCG9842_B2735 2472630 2473331 + conserved hypothetical protein gene gene2539 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2735 BCG9842_B2736 BCG9842_B2736 BCG9842_B2736 2471844 2472323 + conserved hypothetical protein gene gene2538 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2736 BCG9842_B2737 BCG9842_B2737 BCG9842_B2737 2471033 2471344 + probable heterocycle-containing bacteriocin%2C family identified by match to protein family HMM TIGR03601 gene gene2537 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2737 BCG9842_B2738 BCG9842_B2738 BCG9842_B2738 2470337 2470579 + conserved hypothetical protein gene gene2536 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2738 BCG9842_B2739 BCG9842_B2739 tenA tenA 2469229 2469918 + transcriptional activator TenA identified by match to protein family HMM PF03070 gene gene2535 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2739 BCG9842_B2741 BCG9842_B2741 ddlB ddlB 2468008 2468922 + D-alanine--D-alanine ligase identified by match to protein family HMM PF01071%3B match to protein family HMM PF01820%3B match to protein family HMM PF02655%3B match to protein family HMM PF07478%3B match to protein family HMM PF08443%3B match to protein family HMM TIGR01205 gene gene2534 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2741 BCG9842_B2742 BCG9842_B2742 BCG9842_B2742 2466555 2468003 + transcriptional regulator%2C GntR family identified by match to protein family HMM PF00155%3B match to protein family HMM PF00392 gene gene2533 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2742 BCG9842_B2743 BCG9842_B2743 BCG9842_B2743 2465440 2466465 + putative homoserine dehydrogenase identified by match to protein family HMM PF00742%3B match to protein family HMM PF03447 gene gene2532 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2743 BCG9842_B2744 BCG9842_B2744 BCG9842_B2744 2464111 2465352 + putative lipase gene gene2531 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2744 BCG9842_B2745 BCG9842_B2745 BCG9842_B2745 2463493 2463834 - hypothetical protein identified by glimmer%3B putative gene gene2530 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2745 BCG9842_B2746 BCG9842_B2746 BCG9842_B2746 2462720 2463415 + conserved hypothetical protein gene gene2529 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2746 BCG9842_B2747 BCG9842_B2747 BCG9842_B2747 2460747 2462678 + efflux ABC transporter%2C permease protein identified by match to protein family HMM PF02687 gene gene2528 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2747 BCG9842_B2748 BCG9842_B2748 BCG9842_B2748 2460002 2460772 + ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005 gene gene2527 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2748 BCG9842_B2749 BCG9842_B2749 BCG9842_B2749 2458677 2459270 + acetyltransferase%2C GNAT family identified by match to protein family HMM PF00583 gene gene2526 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2749 BCG9842_B2750 BCG9842_B2750 BCG9842_B2750 2457010 2458656 + nucleotide-binding protein ExpZ identified by match to protein family HMM PF00005 gene gene2525 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2750 BCG9842_B2751 BCG9842_B2751 BCG9842_B2751 2455520 2456509 - aldo/keto family dehydrogenase identified by match to protein family HMM PF00248 gene gene2524 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2751 BCG9842_B2752 BCG9842_B2752 BCG9842_B2752 2454565 2455461 + transcriptional regulator%2C LysR family identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466 gene gene2523 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2752 BCG9842_B2753 BCG9842_B2753 BCG9842_B2753 2453524 2454363 + sensor histidine kinase identified by match to protein family HMM PF02518 gene gene2522 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2753 BCG9842_B2754 BCG9842_B2754 BCG9842_B2754 2452676 2453383 + DNA-binding response regulator identified by match to protein family HMM PF00072%3B match to protein family HMM PF00486 gene gene2521 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2754 BCG9842_B2755 BCG9842_B2755 BCG9842_B2755 2451634 2452548 + acetamidase/formamidase family protein identified by match to protein family HMM PF03069 gene gene2520 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2755 BCG9842_B2756 BCG9842_B2756 cwlJ1 cwlJ1 2451055 2451483 - cell wall hydrolase identified by match to protein family HMM PF07486 gene gene2519 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2756 BCG9842_B2757 BCG9842_B2757 lysS_1 lysS_1 2449442 2450995 + lysyl-tRNA synthetase identified by match to protein family HMM PF01921%3B match to protein family HMM TIGR00467 gene gene2518 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2757 BCG9842_B2758 BCG9842_B2758 BCG9842_B2758 2448862 2449032 + conserved hypothetical protein gene gene2517 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2758 BCG9842_B2759 BCG9842_B2759 BCG9842_B2759 2447815 2448717 - regucalcin family protein identified by match to protein family HMM PF08450 gene gene2516 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2759 BCG9842_B2760 BCG9842_B2760 BCG9842_B2760 2447117 2447818 - conserved hypothetical protein identified by match to protein family HMM PF03848%3B match to protein family HMM PF08241%3B match to protein family HMM PF08242 gene gene2515 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2760 BCG9842_B2761 BCG9842_B2761 BCG9842_B2761 2446373 2447005 + intracellular protease%2C ThiJ/PfpI family identified by match to protein family HMM PF01965 gene gene2514 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2761 BCG9842_B2762 BCG9842_B2762 BCG9842_B2762 2445478 2446107 + conserved domain protein identified by match to protein family HMM PF08241%3B match to protein family HMM PF08242 gene gene2513 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2762 BCG9842_B2763 BCG9842_B2763 BCG9842_B2763 2444722 2445219 + hypothetical Membrane Associated Protein gene gene2512 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2763 BCG9842_B2764 BCG9842_B2764 BCG9842_B2764 2444430 2444666 + dTDP-glucose 4%2C6-dehydratase gene gene2511 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2764 BCG9842_B2765 BCG9842_B2765 BCG9842_B2765 2443674 2444315 + oxidoreductase%2C zinc-binding dehydrogenase family superfamily an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a premature stop%3B identified by match to protein family HMM PF08240 gene gene2510 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2765 BCG9842_B2766 BCG9842_B2766 BCG9842_B2766 2443321 2443563 - hypothetical protein identified by glimmer%3B putative gene gene2509 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2766 BCG9842_B2767 BCG9842_B2767 BCG9842_B2767 2443085 2443297 + hypothetical protein identified by glimmer%3B putative gene gene2508 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2767 BCG9842_B2768 BCG9842_B2768 BCG9842_B2768 2442628 2442918 + conserved hypothetical protein gene gene2507 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2768 BCG9842_B2769 BCG9842_B2769 BCG9842_B2769 2441177 2442547 + conserved hypothetical protein identified by match to protein family HMM PF00155%3B match to protein family HMM PF00392 gene gene2506 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2769 BCG9842_B2770 BCG9842_B2770 BCG9842_B2770 2440756 2441106 + group-specific protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift gene gene2505 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2770 BCG9842_B2771 BCG9842_B2771 BCG9842_B2771 2438501 2440192 - conserved hypothetical protein identified by match to protein family HMM PF01432%3B match to protein family HMM TIGR02289 gene gene2504 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2771 BCG9842_B2772 BCG9842_B2772 BCG9842_B2772 2437392 2438486 + transcriptional regulator%2C AraC family identified by match to protein family HMM PF00165 gene gene2503 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2772 BCG9842_B2773 BCG9842_B2773 BCG9842_B2773 2436113 2437060 - conserved hypothetical protein gene gene2502 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2773 BCG9842_B2774 BCG9842_B2774 BCG9842_B2774 2435228 2436034 + hypothetical aminoglycoside phosphotransferase identified by match to protein family HMM PF01636 gene gene2501 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2774 BCG9842_B2775 BCG9842_B2775 BCG9842_B2775 2434371 2435165 + conserved domain protein gene gene2500 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2775 BCG9842_B2776 BCG9842_B2776 BCG9842_B2776 2433420 2434253 + lipase identified by match to protein family HMM PF00561 gene gene2499 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2776 BCG9842_B2777 BCG9842_B2777 BCG9842_B2777 2432531 2433283 + methyltransferase identified by match to protein family HMM PF08241 gene gene2498 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2777 BCG9842_B2778 BCG9842_B2778 BCG9842_B2778 2432059 2432397 + transcriptional regulator identified by match to protein family HMM PF01638%3B match to protein family HMM PF03551 gene gene2497 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2778 BCG9842_B2779 BCG9842_B2779 BCG9842_B2779 2430993 2431709 - short chain dehydrogenase identified by match to protein family HMM PF00106 gene gene2496 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2779 BCG9842_B2780 BCG9842_B2780 BCG9842_B2780 2429920 2430729 + transcriptional regulator%2C MerR family identified by match to protein family HMM PF00376%3B match to protein family HMM PF06445 gene gene2495 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2780 BCG9842_B2781 BCG9842_B2781 BCG9842_B2781 2426581 2429751 + excinuclease ABC subunit A identified by match to protein family HMM PF00005 gene gene2494 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2781 BCG9842_B2782 BCG9842_B2782 BCG9842_B2782 2426023 2426493 + conserved hypothetical protein identified by match to protein family HMM PF08327 gene gene2493 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2782 BCG9842_B2783 BCG9842_B2783 BCG9842_B2783 2425601 2425783 + conserved hypothetical protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a premature stop gene gene2492 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2783 BCG9842_B2784 BCG9842_B2784 BCG9842_B2784 2425223 2425411 + conserved hypothetical protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a premature stop gene gene2491 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2784 BCG9842_B2785 BCG9842_B2785 BCG9842_B2785 2422869 2425064 + collagen adhesion protein identified by match to protein family HMM PF05738%3B match to protein family HMM TIGR01167 gene gene2490 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2785 BCG9842_B2786 BCG9842_B2786 BCG9842_B2786 2421810 2422658 + sortase identified by match to protein family HMM PF04203%3B match to protein family HMM TIGR01076 gene gene2489 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2786 BCG9842_B2787 BCG9842_B2787 BCG9842_B2787 2420076 2421767 + collagen adhesion protein identified by match to protein family HMM PF00746%3B match to protein family HMM PF05738%3B match to protein family HMM TIGR01167 gene gene2488 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2787 BCG9842_B2788 BCG9842_B2788 BCG9842_B2788 2418288 2419514 - transcriptional regulator%2C AraC family identified by match to protein family HMM PF00165 gene gene2487 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2788 BCG9842_B2789 BCG9842_B2789 BCG9842_B2789 2415274 2417955 + bacillolysin identified by match to protein family HMM PF01447%3B match to protein family HMM PF02868%3B match to protein family HMM PF03413%3B match to protein family HMM PF07504%3B match to protein family HMM TIGR01167 gene gene2486 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2789 BCG9842_B2790 BCG9842_B2790 BCG9842_B2790 2414724 2415098 + hypothetical protein identified by glimmer%3B putative gene gene2485 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2790 BCG9842_B2791 BCG9842_B2791 BCG9842_B2791 2413683 2414531 + acetyltransferase%2C GNAT family identified by match to protein family HMM PF00583 gene gene2484 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2791 BCG9842_B2792 BCG9842_B2792 BCG9842_B2792 2412802 2413539 + phosphorylase family protein identified by match to protein family HMM PF01048 gene gene2483 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2792 BCG9842_B2793 BCG9842_B2793 BCG9842_B2793 2412596 2412805 + YnaE gene gene2482 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2793 BCG9842_B2794 BCG9842_B2794 BCG9842_B2794 2411987 2412442 + YnaE an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a premature stop gene gene2481 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2794 BCG9842_B2795 BCG9842_B2795 BCG9842_B2795 2411365 2411973 + conserved hypothetical protein TIGR00488 identified by match to protein family HMM PF01966%3B match to protein family HMM TIGR00277%3B match to protein family HMM TIGR00488 gene gene2480 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2795 BCG9842_B2796 BCG9842_B2796 BCG9842_B2796 2410477 2411172 - DNA-binding response regulator identified by match to protein family HMM PF00072%3B match to protein family HMM PF00486 gene gene2479 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2796 BCG9842_B2797 BCG9842_B2797 BCG9842_B2797 2409330 2410487 - sensor histidine kinase identified by match to protein family HMM PF00512%3B match to protein family HMM PF02518 gene gene2478 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2797 BCG9842_B2798 BCG9842_B2798 BCG9842_B2798 2408138 2409154 - D-alanyl-D-alanine carboxypeptidase family protein identified by match to protein family HMM PF00768 gene gene2477 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2798 BCG9842_B2799 BCG9842_B2799 BCG9842_B2799 2407668 2407805 - hypothetical protein identified by glimmer%3B putative gene gene2476 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2799 BCG9842_B2800 BCG9842_B2800 BCG9842_B2800 2406450 2407058 - hypothetical protein identified by glimmer%3B putative gene gene2475 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2800 BCG9842_B2801 BCG9842_B2801 BCG9842_B2801 2405646 2406179 + aminoglycoside N6'-acetyltransferase identified by match to protein family HMM PF00583 gene gene2474 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2801 BCG9842_B2802 BCG9842_B2802 BCG9842_B2802 2405184 2405540 + conserved hypothetical protein gene gene2473 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2802 BCG9842_B2803 BCG9842_B2803 BCG9842_B2803 2404256 2404588 - conserved hypothetical protein gene gene2472 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2803 BCG9842_B2804 BCG9842_B2804 BCG9842_B2804 2403959 2404096 - 1-related%2C transposase an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a premature stop gene gene2471 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2804 BCG9842_B2805 BCG9842_B2805 BCG9842_B2805 2402940 2403824 - integrase core domain protein identified by match to protein family HMM PF00665 gene gene2470 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2805 BCG9842_B2806 BCG9842_B2806 BCG9842_B2806 2400709 2402649 + putative acetoacetyl-CoA synthase identified by match to protein family HMM PF00501 gene gene2469 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2806 BCG9842_B2807 BCG9842_B2807 BCG9842_B2807 2399118 2400659 + carboxyl transferase domain protein identified by match to protein family HMM PF01039 gene gene2468 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2807 BCG9842_B2808 BCG9842_B2808 BCG9842_B2808 2398327 2399115 + enoyl-CoA hydratase/isomerase family protein identified by match to protein family HMM PF00378 gene gene2467 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2808 BCG9842_B2809 BCG9842_B2809 mvaB mvaB 2397411 2398322 + 3-hydroxy-3-methylglutarate-CoA lyase identified by match to protein family HMM PF00682 gene gene2466 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2809 BCG9842_B2810 BCG9842_B2810 BCG9842_B2810 2397174 2397389 + conserved hypothetical protein identified by match to protein family HMM PF00364 gene gene2465 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2810 BCG9842_B2811 BCG9842_B2811 BCG9842_B2811 2395810 2397147 + putative acetyl-CoA carboxylase%2C biotin carboxylase identified by match to protein family HMM PF00289%3B match to protein family HMM PF02222%3B match to protein family HMM PF02785%3B match to protein family HMM PF02786 gene gene2464 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2811 BCG9842_B2812 BCG9842_B2812 BCG9842_B2812 2394649 2395794 + acyl-CoA dehydrogenase identified by match to protein family HMM PF00441%3B match to protein family HMM PF02770%3B match to protein family HMM PF02771%3B match to protein family HMM PF08028 gene gene2463 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2812 BCG9842_B2813 BCG9842_B2813 BCG9842_B2813 2393464 2394432 + conserved hypothetical protein identified by match to protein family HMM PF04463%3B match to protein family HMM PF08349 gene gene2462 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2813 BCG9842_B2814 BCG9842_B2814 BCG9842_B2814 2392931 2393230 - hypothetical protein identified by glimmer%3B putative gene gene2461 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2814 BCG9842_B2815 BCG9842_B2815 BCG9842_B2815 2392156 2392809 + transcriptional regulator%2C TetR family identified by match to protein family HMM PF00440 gene gene2460 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2815 BCG9842_B2816 BCG9842_B2816 BCG9842_B2816 2391112 2392131 + putative ABC transporter%2C permease protein identified by match to protein family HMM PF01061 gene gene2459 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2816 BCG9842_B2817 BCG9842_B2817 BCG9842_B2817 2390390 2391115 + ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005 gene gene2458 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2817 BCG9842_B2818 BCG9842_B2818 BCG9842_B2818 2389950 2390201 + hypothetical protein identified by glimmer%3B putative gene gene2457 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2818 BCG9842_B2819 BCG9842_B2819 BCG9842_B2819 2388892 2389734 + phosphoesterase identified by match to protein family HMM PF00149 gene gene2456 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2819 BCG9842_B2820 BCG9842_B2820 bla1 bla1 2387693 2388631 + beta-lactamase Bla1 identified by match to protein family HMM PF00144 gene gene2455 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2820 BCG9842_B2821 BCG9842_B2821 BCG9842_B2821 2385355 2387487 + penicillin-binding protein identified by match to protein family HMM PF00905%3B match to protein family HMM PF03717 gene gene2454 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2821 BCG9842_B2822 BCG9842_B2822 BCG9842_B2822 2383211 2384971 - penicillin-binding protein identified by match to protein family HMM PF00905%3B match to protein family HMM PF03717 gene gene2453 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2822 BCG9842_B2823 BCG9842_B2823 BCG9842_B2823 2382372 2383199 + hypothetical protein identified by glimmer%3B putative gene gene2452 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2823 BCG9842_B2824 BCG9842_B2824 BCG9842_B2824 2381849 2382382 + RNA polymerase sigma-70 factor%2C ECF subfamily identified by match to protein family HMM PF04542%3B match to protein family HMM PF04545%3B match to protein family HMM PF08281%3B match to protein family HMM TIGR02937 gene gene2451 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2824 BCG9842_B2825 BCG9842_B2825 BCG9842_B2825 2381633 2381764 + hypothetical protein identified by glimmer%3B putative gene gene2450 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2825 BCG9842_B2826 BCG9842_B2826 BCG9842_B2826 2379475 2381442 + penicillin-binding protein 3 identified by match to protein family HMM PF00905%3B match to protein family HMM PF03717%3B match to protein family HMM PF05223 gene gene2449 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2826 BCG9842_B2827 BCG9842_B2827 BCG9842_B2827 2377871 2378926 + putative surface layer protein gene gene2448 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2827 BCG9842_B2828 BCG9842_B2828 BCG9842_B2828 2376728 2376880 + hypothetical protein identified by glimmer%3B putative gene gene2447 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2828 BCG9842_B2829 BCG9842_B2829 BCG9842_B2829 2375270 2375728 - group-specific protein gene gene2446 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2829 BCG9842_B2830 BCG9842_B2830 BCG9842_B2830 2375045 2375158 - hypothetical protein identified by glimmer%3B putative gene gene2445 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2830 BCG9842_B2831 BCG9842_B2831 BCG9842_B2831 2373806 2374330 + lipoprotein%2C putative gene gene2444 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2831 BCG9842_B2832 BCG9842_B2832 BCG9842_B2832 2373080 2373655 - peptidase M56%2C BlaR1%2C putative gene gene2443 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2832 BCG9842_B2833 BCG9842_B2833 BCG9842_B2833 2371766 2372587 + polysaccharide deacetylase identified by match to protein family HMM PF01522 gene gene2442 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2833 BCG9842_B2834 BCG9842_B2834 BCG9842_B2834 2371128 2371631 + group-specific protein gene gene2441 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2834 BCG9842_B2835 BCG9842_B2835 BCG9842_B2835 2370606 2370746 + D-serine dehydratase (D-serine deaminase) (DSD) an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts gene gene2440 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2835 BCG9842_B2836 BCG9842_B2836 BCG9842_B2836 2369950 2370504 - DNA-binding protein identified by match to protein family HMM PF01381%3B match to protein family HMM PF07883 gene gene2439 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2836 BCG9842_B2837 BCG9842_B2837 BCG9842_B2837 2368381 2369799 + S-layer protein identified by match to protein family HMM PF00395%3B match to protein family HMM PF01832 gene gene2438 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2837 BCG9842_B2838 BCG9842_B2838 BCG9842_B2838 2364416 2365516 - conserved hypothetical protein gene gene2437 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2838 BCG9842_B2839 BCG9842_B2839 BCG9842_B2839 2364258 2364416 - putative lipoprotein gene gene2436 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2839 BCG9842_B2840 BCG9842_B2840 BCG9842_B2840 2363413 2363706 + transcriptional repressor PagR identified by match to protein family HMM PF01022 gene gene2435 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2840 BCG9842_B2841 BCG9842_B2841 BCG9842_B2841 2363084 2363206 + hypothetical protein identified by glimmer%3B putative gene gene2434 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2841 BCG9842_B2842 BCG9842_B2842 BCG9842_B2842 2362157 2362561 - group-specific protein gene gene2433 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2842 BCG9842_B2843 BCG9842_B2843 BCG9842_B2843 2361637 2361789 + S-layer domain protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts gene gene2432 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2843 BCG9842_B2844 BCG9842_B2844 BCG9842_B2844 2360711 2361181 - conserved hypothetical protein gene gene2431 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2844 BCG9842_B2845 BCG9842_B2845 BCG9842_B2845 2359707 2359982 - transcription factor%2C RsfA family an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift gene gene2430 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2845 BCG9842_B2846 BCG9842_B2846 BCG9842_B2846 2359516 2359710 - transcription factor%2C RsfA family an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift gene gene2429 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2846 BCG9842_B2847 BCG9842_B2847 BCG9842_B2847 2358069 2359343 + major facilitator family transporter identified by match to protein family HMM PF07690 gene gene2428 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2847 BCG9842_B2848 BCG9842_B2848 BCG9842_B2848 2356579 2357952 + aminopeptidase identified by match to protein family HMM PF01546%3B match to protein family HMM PF04389 gene gene2427 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2848 BCG9842_B2849 BCG9842_B2849 BCG9842_B2849 2355511 2356446 + AP endonuclease%2C family 2 identified by match to protein family HMM PF01261 gene gene2426 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2849 BCG9842_B2850 BCG9842_B2850 BCG9842_B2850 2354822 2355499 + LmbE family protein identified by match to protein family HMM PF02585 gene gene2425 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2850 BCG9842_B2851 BCG9842_B2851 BCG9842_B2851 2354126 2354815 + conserved hypothetical protein identified by match to protein family HMM PF08889 gene gene2424 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2851 BCG9842_B2852 BCG9842_B2852 BCG9842_B2852 2353241 2354122 + conserved hypothetical protein gene gene2423 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2852 BCG9842_B2853 BCG9842_B2853 BCG9842_B2853 2351988 2353229 + DegT/DnrJ/EryC1/StrS aminotransferase family identified by match to protein family HMM PF01041 gene gene2422 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2853 BCG9842_B2854 BCG9842_B2854 BCG9842_B2854 2351090 2352013 + NAD-dependent epimerase/dehydratase identified by match to protein family HMM PF01073%3B match to protein family HMM PF01370%3B match to protein family HMM PF02719%3B match to protein family HMM PF04321%3B match to protein family HMM PF07993 gene gene2421 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2854 BCG9842_B2855 BCG9842_B2855 BCG9842_B2855 2349926 2351083 + aminotransferase family%2C DegT/DnrJ/EryC1/StrS identified by match to protein family HMM PF01041%3B match to protein family HMM PF01212 gene gene2420 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2855 BCG9842_B2856 BCG9842_B2856 BCG9842_B2856 2348589 2349917 + UDP-N-acetyl-D-mannosaminuronate dehydrogenase identified by match to protein family HMM PF00984%3B match to protein family HMM PF03446%3B match to protein family HMM PF03720%3B match to protein family HMM PF03721%3B match to protein family HMM TIGR03026 gene gene2419 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2856 BCG9842_B2857 BCG9842_B2857 BCG9842_B2857 2347401 2347877 + YvbK identified by match to protein family HMM PF00583 gene gene2418 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2857 BCG9842_B2858 BCG9842_B2858 BCG9842_B2858 2346802 2347191 + conserved hypothetical protein gene gene2417 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2858 BCG9842_B2859 BCG9842_B2859 BCG9842_B2859 2345831 2346337 + acetyltransferase%2C GNAT family identified by match to protein family HMM PF00583 gene gene2416 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2859 BCG9842_B2860 BCG9842_B2860 BCG9842_B2860 2344878 2345525 + antigen gene gene2415 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2860 BCG9842_B2861 BCG9842_B2861 BCG9842_B2861 2344331 2344462 + conserved hypothetical protein gene gene2414 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2861 BCG9842_B2862 BCG9842_B2862 BCG9842_B2862 2342554 2343498 - beta-lactamase identified by match to protein family HMM PF00144 gene gene2413 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2862 BCG9842_B2863 BCG9842_B2863 BCG9842_B2863 2341828 2342436 + conserved hypothetical protein gene gene2412 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2863 BCG9842_B2864 BCG9842_B2864 BCG9842_B2864 2341655 2341792 + hypothetical protein identified by glimmer%3B putative gene gene2411 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2864 BCG9842_B2865 BCG9842_B2865 BCG9842_B2865 2341349 2341633 + poly%2C putative an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a premature stop gene gene2410 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2865 BCG9842_B2866 BCG9842_B2866 BCG9842_B2866 2340944 2341087 + hypothetical protein identified by glimmer%3B putative gene gene2409 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2866 BCG9842_B2867 BCG9842_B2867 BCG9842_B2867 2339423 2339833 + conserved hypothetical protein gene gene2408 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2867 BCG9842_B2868 BCG9842_B2868 BCG9842_B2868 2337101 2339062 + glycosyl hydrolase gene gene2407 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2868 BCG9842_B2869 BCG9842_B2869 BCG9842_B2869 2336174 2336602 + conserved hypothetical protein gene gene2406 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2869 BCG9842_B2870 BCG9842_B2870 BCG9842_B2870 2335093 2335857 + 3-oxoacyl-[acyl-carrier-protein] reductase identified by match to protein family HMM PF00106 gene gene2405 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2870 BCG9842_B2871 BCG9842_B2871 BCG9842_B2871 2333984 2334706 + thioesterase identified by match to protein family HMM PF00975 gene gene2404 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2871 BCG9842_B2872 BCG9842_B2872 BCG9842_B2872 2333371 2333997 + 4'-phosphopantetheinyl transferase Sfp identified by match to protein family HMM PF01648%3B match to protein family HMM TIGR00556 gene gene2403 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2872 BCG9842_B2873 BCG9842_B2873 BCG9842_B2873 2318048 2332930 + bacitracin synthetase 1 identified by match to protein family HMM PF00501%3B match to protein family HMM PF00550%3B match to protein family HMM PF00668%3B match to protein family HMM PF00975%3B match to protein family HMM TIGR01720%3B match to protein family HMM TIGR01733 gene gene2402 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2873 BCG9842_B2874 BCG9842_B2874 BCG9842_B2874 2311581 2318051 + non-ribosomal peptide synthase identified by match to protein family HMM PF00501%3B match to protein family HMM PF00550%3B match to protein family HMM PF00668%3B match to protein family HMM TIGR01733 gene gene2401 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2874 BCG9842_B2875 BCG9842_B2875 BCG9842_B2875 2307022 2311578 + linear gramicidin synthetase subunit C an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF00501%3B match to protein family HMM PF00550%3B match to protein family HMM PF00668%3B match to protein family HMM TIGR01720%3B match to protein family HMM TIGR01733 gene gene2400 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2875 BCG9842_B2876 BCG9842_B2876 BCG9842_B2876 2305755 2307008 + macrolide-efflux protein identified by match to protein family HMM PF07690 gene gene2399 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2876 BCG9842_B2877 BCG9842_B2877 BCG9842_B2877 2304096 2304686 + conserved hypothetical protein%2C putative identified by match to protein family HMM PF00657 gene gene2398 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2877 BCG9842_B2878 BCG9842_B2878 BCG9842_B2878 2302784 2303893 + acyltransferase%2C putative identified by match to protein family HMM PF01757 gene gene2397 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2878 BCG9842_B2879 BCG9842_B2879 BCG9842_B2879 2300974 2302287 + D-alanyl-D-alanine carboxypeptidase identified by match to protein family HMM PF00144%3B match to protein family HMM PF00768%3B match to protein family HMM PF07943 gene gene2396 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2879 BCG9842_B2880 BCG9842_B2880 BCG9842_B2880 2299832 2300491 + chloramphenicol acetyltransferase identified by match to protein family HMM PF00132 gene gene2395 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2880 BCG9842_B2881 BCG9842_B2881 BCG9842_B2881 2298908 2299579 + inner membrane protein YfcA identified by match to protein family HMM PF01925 gene gene2394 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2881 BCG9842_B2882 BCG9842_B2882 BCG9842_B2882 2297503 2298753 + conserved hypothetical protein gene gene2393 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2882 BCG9842_B2883 BCG9842_B2883 BCG9842_B2883 2296613 2296891 + transition state regulatory protein AbrB identified by match to protein family HMM PF04014%3B match to protein family HMM TIGR01439 gene gene2392 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2883 BCG9842_B2884 BCG9842_B2884 BCG9842_B2884 2295594 2296472 + transcriptional regulator%2C XRE family identified by match to protein family HMM PF01381 gene gene2391 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2884 BCG9842_B2885 BCG9842_B2885 BCG9842_B2885 2294965 2295216 - transcriptional regulator%2C LuxR family identified by match to protein family HMM PF00196 gene gene2390 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2885 BCG9842_B2886 BCG9842_B2886 BCG9842_B2886 2294219 2294824 + conserved hypothetical protein gene gene2389 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2886 BCG9842_B2887 BCG9842_B2887 BCG9842_B2887 2293384 2294193 + conserved hypothetical protein gene gene2388 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2887 BCG9842_B2888 BCG9842_B2888 pepD pepD 2291602 2293071 + aminoacyl-histidine dipeptidase identified by match to protein family HMM PF01546%3B match to protein family HMM PF07687%3B match to protein family HMM TIGR01893 gene gene2387 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2888 BCG9842_B2889 BCG9842_B2889 BCG9842_B2889 2291001 2291390 - hypothetical Cytosolic Protein identified by match to protein family HMM PF06486%3B match to protein family HMM TIGR01655 gene gene2386 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2889 BCG9842_B2890 BCG9842_B2890 BCG9842_B2890 2290806 2290982 + conserved domain protein gene gene2385 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2890 BCG9842_B2891 BCG9842_B2891 BCG9842_B2891 2290605 2290733 + conserved hypothetical protein gene gene2384 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2891 BCG9842_B2892 BCG9842_B2892 BCG9842_B2892 2289755 2290492 + hypothetical protein identified by glimmer%3B putative gene gene2383 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2892 BCG9842_B2893 BCG9842_B2893 gpm gpm 2288779 2289516 + phosphoglycerate mutase identified by match to protein family HMM PF00300%3B match to protein family HMM TIGR01258 gene gene2382 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2893 BCG9842_B2894 BCG9842_B2894 BCG9842_B2894 2288131 2288613 + transcriptional regulator%2C MarR family identified by match to protein family HMM PF01047 gene gene2381 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2894 BCG9842_B2895 BCG9842_B2895 BCG9842_B2895 2287855 2287983 - indole-3-pyruvate decarboxylase an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift gene gene2380 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2895 BCG9842_B2896 BCG9842_B2896 BCG9842_B2896 2287034 2287858 - indole-3-pyruvate decarboxylase (Indolepyruvatedecarboxylase) an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF02775 gene gene2379 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2896 BCG9842_B2897 BCG9842_B2897 BCG9842_B2897 2286098 2286880 + conserved hypothetical protein identified by match to protein family HMM PF08241 gene gene2378 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2897 BCG9842_B2898 BCG9842_B2898 BCG9842_B2898 2285346 2285753 + conserved hypothetical protein identified by match to protein family HMM PF00903%3B match to protein family HMM PF06983 gene gene2377 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2898 BCG9842_B2899 BCG9842_B2899 BCG9842_B2899 2284517 2285227 + conserved hypothetical protein identified by match to protein family HMM PF03848%3B match to protein family HMM PF05724%3B match to protein family HMM PF08241%3B match to protein family HMM PF08242 gene gene2376 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2899 BCG9842_B2900 BCG9842_B2900 BCG9842_B2900 2282862 2284214 + ATP-dependent RNA helicase%2C DEAD/DEAH box family identified by match to protein family HMM PF00270%3B match to protein family HMM PF00271 gene gene2375 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2900 BCG9842_B2901 BCG9842_B2901 BCG9842_B2901 2282519 2282788 + hypothetical protein identified by glimmer%3B putative gene gene2374 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2901 BCG9842_B2902 BCG9842_B2902 BCG9842_B2902 2281673 2282359 + metallo-beta-lactamase family protein identified by match to protein family HMM PF00753 gene gene2373 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2902 BCG9842_B2903 BCG9842_B2903 BCG9842_B2903 2281097 2281426 - conserved hypothetical protein identified by match to protein family HMM PF06803 gene gene2372 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2903 BCG9842_B2904 BCG9842_B2904 BCG9842_B2904 2279640 2280875 + tetracycline resistance protein identified by match to protein family HMM PF07690 gene gene2371 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2904 BCG9842_B2905 BCG9842_B2905 BCG9842_B2905 2279028 2279498 + transcriptional regulator%2C MarR family identified by match to protein family HMM PF01047 gene gene2370 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2905 BCG9842_B2906 BCG9842_B2906 tdcB tdcB 2277803 2278804 + threonine ammonia-lyase%2C catabolic identified by match to protein family HMM PF00291%3B match to protein family HMM TIGR01127 gene gene2369 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2906 BCG9842_B2907 BCG9842_B2907 BCG9842_B2907 2276145 2277728 + acetyltransferase%2C GNAT family identified by match to protein family HMM PF00266 gene gene2368 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2907 BCG9842_B2908 BCG9842_B2908 BCG9842_B2908 2275664 2276074 + putative membrane protein identified by match to protein family HMM PF02660 gene gene2367 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2908 BCG9842_B2909 BCG9842_B2909 BCG9842_B2909 2274495 2275388 + conserved hypothetical protein identified by match to protein family HMM PF01869 gene gene2366 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2909 BCG9842_B2910 BCG9842_B2910 BCG9842_B2910 2273328 2274476 + conserved hypothetical protein identified by match to protein family HMM PF03702 gene gene2365 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2910 BCG9842_B2911 BCG9842_B2911 BCG9842_B2911 2273039 2273305 + conserved hypothetical protein gene gene2364 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2911 BCG9842_B2912 BCG9842_B2912 BCG9842_B2912 2271677 2272960 + putative PTS system%2C cellobiose-specific IIC component identified by match to protein family HMM PF02378%3B match to protein family HMM TIGR00410 gene gene2363 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2912 BCG9842_B2913 BCG9842_B2913 BCG9842_B2913 2271360 2271665 + putative PTS system%2C cellobiose-specific IIB component identified by match to protein family HMM PF02302 gene gene2362 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2913 BCG9842_B2914 BCG9842_B2914 BCG9842_B2914 2269573 2271132 - conserved hypothetical protein identified by match to protein family HMM PF02638 gene gene2361 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2914 BCG9842_B2915 BCG9842_B2915 BCG9842_B2915 2268681 2269514 + hypothetical protein identified by glimmer%3B putative gene gene2360 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2915 BCG9842_B2916 BCG9842_B2916 BCG9842_B2916 2267493 2268656 + conserved hypothetical protein identified by match to protein family HMM PF05816 gene gene2359 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2916 BCG9842_B2917 BCG9842_B2917 BCG9842_B2917 2266622 2267230 + O-methyltransferase family protein identified by match to protein family HMM PF01596 gene gene2358 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2917 BCG9842_B2918 BCG9842_B2918 BCG9842_B2918 2266174 2266332 - hypothetical protein identified by glimmer%3B putative gene gene2357 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2918 BCG9842_B2919 BCG9842_B2919 BCG9842_B2919 2265443 2266141 + RNA polymerase sigma-70 factor%2C ECF subfamily an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF08281 gene gene2356 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2919 BCG9842_B2920 BCG9842_B2920 BCG9842_B2920 2265276 2265389 + RNA polymerase sigma-70 factor an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift gene gene2355 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2920 BCG9842_B2921 BCG9842_B2921 BCG9842_B2921 2263988 2265298 + conserved hypothetical protein identified by match to protein family HMM PF01266%3B match to protein family HMM PF01593 gene gene2354 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2921 BCG9842_B2922 BCG9842_B2922 BCG9842_B2922 2263589 2263894 + hypothetical protein identified by glimmer%3B putative gene gene2353 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2922 BCG9842_B2923 BCG9842_B2923 BCG9842_B2923 2262727 2263359 - conserved domain protein identified by match to protein family HMM PF00190 gene gene2352 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2923 BCG9842_B2924 BCG9842_B2924 BCG9842_B2924 2260813 2262165 + exosporium protein identified by match to protein family HMM PF01391 gene gene2351 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2924 BCG9842_B2925 BCG9842_B2925 BCG9842_B2925 2259495 2260253 + collagen triple helix repeat protein identified by match to protein family HMM PF01391 gene gene2350 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2925 BCG9842_B2926 BCG9842_B2926 BCG9842_B2926 2259083 2259205 + hypothetical protein identified by glimmer%3B putative gene gene2349 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2926 BCG9842_B2927 BCG9842_B2927 BCG9842_B2927 2258719 2259078 - BclA protein gene gene2348 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2927 BCG9842_B2928 BCG9842_B2928 BCG9842_B2928 2257796 2258353 + DNA-binding protein identified by match to protein family HMM PF01381%3B match to protein family HMM PF07883 gene gene2347 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2928 BCG9842_B2929 BCG9842_B2929 BCG9842_B2929 2257097 2257681 - transporter%2C LysE family identified by match to protein family HMM PF01810 gene gene2346 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2929 BCG9842_B2930 BCG9842_B2930 BCG9842_B2930 2255976 2256260 - hypothetical protein identified by glimmer%3B putative gene gene2345 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2930 BCG9842_B2931 BCG9842_B2931 BCG9842_B2931 2255095 2255598 - hypothetical protein identified by glimmer%3B putative gene gene2344 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2931 BCG9842_B2932 BCG9842_B2932 BCG9842_B2932 2252638 2254434 + ABC transporter%2C permease/ATP-binding protein identified by match to protein family HMM PF00005%3B match to protein family HMM PF00664 gene gene2343 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2932 BCG9842_B2933 BCG9842_B2933 BCG9842_B2933 2250891 2252645 + ABC transporter%2C permease/ATP-binding protein identified by match to protein family HMM PF00005%3B match to protein family HMM PF00664 gene gene2342 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2933 BCG9842_B2934 BCG9842_B2934 BCG9842_B2934 2250118 2250669 + conserved hypothetical protein identified by match to protein family HMM PF07081 gene gene2341 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2934 BCG9842_B2935 BCG9842_B2935 BCG9842_B2935 2249173 2250057 + conserved hypothetical protein identified by match to protein family HMM PF00583 gene gene2340 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2935 BCG9842_B2936 BCG9842_B2936 BCG9842_B2936 2248225 2248914 + conserved hypothetical protein identified by match to protein family HMM PF03473%3B match to protein family HMM PF03475 gene gene2339 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2936 BCG9842_B2937 BCG9842_B2937 BCG9842_B2937 2247166 2248068 - transcriptional regulator%2C LysR family identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466 gene gene2338 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2937 BCG9842_B2938 BCG9842_B2938 BCG9842_B2938 2246807 2247070 + hypothetical protein identified by glimmer%3B putative gene gene2337 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2938 BCG9842_B2939 BCG9842_B2939 asd asd 2245551 2246594 + aspartate-semialdehyde dehydrogenase identified by match to protein family HMM PF01118%3B match to protein family HMM PF02774%3B match to protein family HMM TIGR01296 gene gene2336 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2939 BCG9842_B2940 BCG9842_B2940 BCG9842_B2940 2244555 2245421 - transcriptional regulator%2C LysR family identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466 gene gene2335 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2940 BCG9842_B2941 BCG9842_B2941 BCG9842_B2941 2243879 2244484 + conserved hypothetical protein gene gene2334 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2941 BCG9842_B2942 BCG9842_B2942 BCG9842_B2942 2242981 2243622 + conserved hypothetical protein gene gene2333 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2942 BCG9842_B2943 BCG9842_B2943 BCG9842_B2943 2242067 2242963 + CAAX amino terminal protease family protein identified by match to protein family HMM PF02517 gene gene2332 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2943 BCG9842_B2944 BCG9842_B2944 cspA2 cspA2 2241480 2241683 - cold shock protein CspA identified by match to protein family HMM PF00313 gene gene2331 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2944 BCG9842_B2945 BCG9842_B2945 BCG9842_B2945 2241208 2241393 - conserved hypothetical protein gene gene2330 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2945 BCG9842_B2946 BCG9842_B2946 BCG9842_B2946 2240614 2241165 + acetyltransferase%2C GNAT family identified by match to protein family HMM PF00583 gene gene2329 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2946 BCG9842_B2947 BCG9842_B2947 BCG9842_B2947 2239755 2240303 - hypothetical protein identified by glimmer%3B putative gene gene2328 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2947 BCG9842_B2948 BCG9842_B2948 hemY2 hemY2 2238308 2239699 + protoporphyrinogen oxidase identified by match to protein family HMM PF01593%3B match to protein family HMM TIGR00562 gene gene2327 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2948 BCG9842_B2949 BCG9842_B2949 BCG9842_B2949 2237981 2238130 + hypothetical protein identified by glimmer%3B putative gene gene2326 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2949 BCG9842_B2950 BCG9842_B2950 BCG9842_B2950 2236864 2237811 + hypothetical protein identified by glimmer%3B putative gene gene2325 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2950 BCG9842_B2951 BCG9842_B2951 BCG9842_B2951 2236152 2236712 + DNA-binding protein identified by match to protein family HMM PF01381%3B match to protein family HMM PF07883 gene gene2324 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2951 BCG9842_B2952 BCG9842_B2952 BCG9842_B2952 2235094 2235981 - putative membrane protein identified by match to protein family HMM PF00892 gene gene2323 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2952 BCG9842_B2953 BCG9842_B2953 BCG9842_B2953 2234559 2235068 + acetyltransferase%2C GNAT family identified by match to protein family HMM PF00583 gene gene2322 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2953 BCG9842_B2954 BCG9842_B2954 BCG9842_B2954 2233462 2234400 + acetyltransferase%2C GNAT family identified by match to protein family HMM PF00583%3B match to protein family HMM PF00805 gene gene2321 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2954 BCG9842_B2955 BCG9842_B2955 BCG9842_B2955 2232900 2233424 + acetyltransferase identified by match to protein family HMM PF00583 gene gene2320 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2955 BCG9842_B2956 BCG9842_B2956 BCG9842_B2956 2231907 2232557 + chloramphenicol acetyltransferase identified by match to protein family HMM PF00302 gene gene2319 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2956 BCG9842_B2957 BCG9842_B2957 BCG9842_B2957 2231524 2231706 - hypothetical protein identified by glimmer%3B putative gene gene2318 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2957 BCG9842_B2958 BCG9842_B2958 BCG9842_B2958 2229246 2231477 + membrane protein%2C MmpL family identified by match to protein family HMM PF03176 gene gene2317 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2958 BCG9842_B2959 BCG9842_B2959 BCG9842_B2959 2228501 2229124 - transcriptional regulator%2C TetR family identified by match to protein family HMM PF00440 gene gene2316 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2959 BCG9842_B2960 BCG9842_B2960 BCG9842_B2960 2227725 2228378 + putative hydrolase identified by match to protein family HMM PF00753 gene gene2315 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2960 BCG9842_B2961 BCG9842_B2961 BCG9842_B2961 2227200 2227607 + ribosomal-protein-alanine acetyltransferase identified by match to protein family HMM PF00583 gene gene2314 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2961 BCG9842_B2962 BCG9842_B2962 BCG9842_B2962 2225695 2226585 + proline iminopeptidase an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a premature stop%3B identified by match to protein family HMM PF00561 gene gene2313 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2962 BCG9842_B2963 BCG9842_B2963 BCG9842_B2963 2225143 2225613 + hypothetical Membrane Spanning Protein identified by match to protein family HMM PF04657 gene gene2312 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2963 BCG9842_B2964 BCG9842_B2964 BCG9842_B2964 2224431 2225126 + catabolite gene activator identified by match to protein family HMM PF00027 gene gene2311 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2964 BCG9842_B2965 BCG9842_B2965 BCG9842_B2965 2223987 2224412 + hypothetical Membrane Spanning Protein identified by match to protein family HMM PF04657 gene gene2310 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2965 BCG9842_B2966 BCG9842_B2966 BCG9842_B2966 2223326 2223811 + conserved hypothetical protein gene gene2309 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2966 BCG9842_B2967 BCG9842_B2967 BCG9842_B2967 2222511 2223113 - hypothetical protein identified by glimmer%3B putative gene gene2308 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2967 BCG9842_B2968 BCG9842_B2968 BCG9842_B2968 2221536 2222477 - inosine-uridine preferring nucleoside hydrolase family protein identified by match to protein family HMM PF01156 gene gene2307 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2968 BCG9842_B2969 BCG9842_B2969 BCG9842_B2969 2220505 2221371 + metallo-beta-lactamase family protein identified by match to protein family HMM PF00753 gene gene2306 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2969 BCG9842_B2970 BCG9842_B2970 BCG9842_B2970 2219612 2220349 - zinc transporter family protein identified by match to protein family HMM PF02535 gene gene2305 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2970 BCG9842_B2971 BCG9842_B2971 BCG9842_B2971 2217410 2219290 + putative ABC transporter%2C permease protein identified by match to protein family HMM PF02687 gene gene2304 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2971 BCG9842_B2972 BCG9842_B2972 BCG9842_B2972 2216631 2217398 + ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005 gene gene2303 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2972 BCG9842_B2973 BCG9842_B2973 thrS1 thrS1 2214459 2216381 + threonyl-tRNA synthetase identified by match to protein family HMM PF00587%3B match to protein family HMM PF02824%3B match to protein family HMM PF03129%3B match to protein family HMM PF07973%3B match to protein family HMM TIGR00418 gene gene2302 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2973 BCG9842_B2974 BCG9842_B2974 BCG9842_B2974 2213103 2213810 + RNA pseudouridine synthase family protein identified by match to protein family HMM PF00849%3B match to protein family HMM PF01479%3B match to protein family HMM TIGR00093 gene gene2301 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2974 BCG9842_B2975 BCG9842_B2975 BCG9842_B2975 2212296 2212916 + conserved hypothetical protein gene gene2300 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2975 BCG9842_B2976 BCG9842_B2976 BCG9842_B2976 2211545 2211853 + group-specific protein gene gene2299 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2976 BCG9842_B2977 BCG9842_B2977 BCG9842_B2977 2210800 2211375 - hypothetical protein identified by glimmer%3B putative gene gene2298 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2977 BCG9842_B2979 BCG9842_B2979 BCG9842_B2979 2208985 2210352 - sodium/alanine symporter family protein identified by match to protein family HMM PF01235%3B match to protein family HMM TIGR00835 gene gene2297 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2979 BCG9842_B2980 BCG9842_B2980 BCG9842_B2980 2207565 2208758 - alkaline serine protease%2C subtilase family identified by match to protein family HMM PF00082%3B match to protein family HMM PF05922 gene gene2296 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2980 BCG9842_B2981 BCG9842_B2981 BCG9842_B2981 2206949 2207473 + DNA polymerase%2C DinB family identified by match to protein family HMM PF05163 gene gene2295 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2981 BCG9842_B2982 BCG9842_B2982 BCG9842_B2982 2206167 2206934 + conserved hypothetical protein gene gene2294 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2982 BCG9842_B2983 BCG9842_B2983 hup2 hup2 2205690 2205962 - DNA-binding protein HU identified by match to protein family HMM PF00216 gene gene2293 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2983 BCG9842_B2984 BCG9842_B2984 BCG9842_B2984 2205109 2205651 + conserved hypothetical protein gene gene2292 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2984 BCG9842_B2985 BCG9842_B2985 BCG9842_B2985 2204335 2205084 + 4'-phosphopantetheinyl transferase identified by match to protein family HMM PF01648%3B match to protein family HMM TIGR00556 gene gene2291 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2985 BCG9842_B2986 BCG9842_B2986 BCG9842_B2986 2202847 2204277 + drug resistance transporter%2C EmrB/QacA family identified by match to protein family HMM PF07690%3B match to protein family HMM TIGR00711 gene gene2290 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2986 BCG9842_B2987 BCG9842_B2987 BCG9842_B2987 2202623 2202847 + mbtH-like protein identified by match to protein family HMM PF03621 gene gene2289 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2987 BCG9842_B2988 BCG9842_B2988 bacF bacF 2195469 2202626 + nonribosomal peptide synthetase DhbF identified by match to protein family HMM PF00501%3B match to protein family HMM PF00550%3B match to protein family HMM PF00668%3B match to protein family HMM PF00975%3B match to protein family HMM TIGR01733 gene gene2288 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2988 BCG9842_B2989 BCG9842_B2989 bacB bacB 2194542 2195435 + isochorismatase identified by match to protein family HMM PF00550%3B match to protein family HMM PF00857 gene gene2287 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2989 BCG9842_B2990 BCG9842_B2990 bacE bacE 2192901 2194517 + 2%2C3-dihydroxybenzoate-AMP ligase identified by match to protein family HMM PF00501%3B match to protein family HMM TIGR02275 gene gene2286 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2990 BCG9842_B2991 BCG9842_B2991 bacC bacC 2191689 2192888 + isochorismate synthase DhbC identified by match to protein family HMM PF00425%3B match to protein family HMM TIGR00543 gene gene2285 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2991 BCG9842_B2992 BCG9842_B2992 bacA bacA 2190878 2191663 + 2%2C3-dihydro-2%2C3-dihydroxybenzoate dehydrogenase identified by match to protein family HMM PF00106%3B match to protein family HMM PF01370%3B match to protein family HMM PF08659 gene gene2284 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2992 BCG9842_B2993 BCG9842_B2993 BCG9842_B2993 2189031 2190233 + putative oxalate:formate antiporter identified by match to protein family HMM PF07690 gene gene2283 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2993 BCG9842_B2994 BCG9842_B2994 BCG9842_B2994 2188882 2189034 + hypothetical protein identified by glimmer%3B putative gene gene2282 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2994 BCG9842_B2995 BCG9842_B2995 BCG9842_B2995 2188379 2188564 - conserved hypothetical protein gene gene2281 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2995 BCG9842_B2996 BCG9842_B2996 BCG9842_B2996 2188021 2188320 + transcriptional regulator%2C ArsR family identified by match to protein family HMM PF01022 gene gene2280 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2996 BCG9842_B2997 BCG9842_B2997 BCG9842_B2997 2187512 2187685 - conserved hypothetical protein gene gene2279 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2997 BCG9842_B2998 BCG9842_B2998 BCG9842_B2998 2184317 2187406 + putative exonuclease identified by match to protein family HMM PF02463 gene gene2278 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2998 BCG9842_B2999 BCG9842_B2999 BCG9842_B2999 2183163 2184320 + putative exonuclease SbcD identified by match to protein family HMM PF00149%3B match to protein family HMM TIGR00619 gene gene2277 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B2999 BCG9842_B3000 BCG9842_B3000 BCG9842_B3000 2182908 2183147 + conserved hypothetical protein gene gene2276 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3000 BCG9842_B3001 BCG9842_B3001 BCG9842_B3001 2182466 2182723 + hypothetical protein identified by glimmer%3B putative gene gene2275 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3001 BCG9842_B3002 BCG9842_B3002 BCG9842_B3002 2181080 2182135 - enoyl-CoA hydratase/isomerase family protein identified by match to protein family HMM PF00378 gene gene2274 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3002 BCG9842_B3003 BCG9842_B3003 BCG9842_B3003 2180196 2180828 - putative homoserine/threonine efflux protein identified by match to protein family HMM PF01810 gene gene2273 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3003 BCG9842_B3004 BCG9842_B3004 mmsA1 mmsA1 2178664 2180124 + methylmalonic acid semialdehyde dehydrogenase identified by match to protein family HMM PF00171%3B match to protein family HMM TIGR01722 gene gene2272 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3004 BCG9842_B3005 BCG9842_B3005 BCG9842_B3005 2177751 2178641 + putative 2-hydroxy-3-oxopropionate reductase identified by match to protein family HMM PF03446%3B match to protein family HMM PF03807 gene gene2271 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3005 BCG9842_B3006 BCG9842_B3006 BCG9842_B3006 2176025 2177734 + acyl-CoA dehydrogenase identified by match to protein family HMM PF00441%3B match to protein family HMM PF02770%3B match to protein family HMM PF02771%3B match to protein family HMM PF08028 gene gene2270 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3006 BCG9842_B3007 BCG9842_B3007 BCG9842_B3007 2175889 2176011 + hypothetical protein identified by glimmer%3B putative gene gene2269 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3007 BCG9842_B3008 BCG9842_B3008 prpB prpB 2174963 2175871 + methylisocitrate lyase identified by match to protein family HMM TIGR02317 gene gene2268 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3008 BCG9842_B3009 BCG9842_B3009 mmgE mmgE 2173508 2174944 + mmgE protein identified by match to protein family HMM PF03972%3B match to protein family HMM TIGR02330 gene gene2267 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3009 BCG9842_B3010 BCG9842_B3010 mmgD mmgD 2172288 2173409 + citrate (Si)-synthase MmgD identified by match to protein family HMM PF00285 gene gene2266 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3010 BCG9842_B3011 BCG9842_B3011 BCG9842_B3011 2171764 2171892 + conserved hypothetical protein gene gene2265 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3011 BCG9842_B3012 BCG9842_B3012 BCG9842_B3012 2170387 2171586 + major facilitator family transporter identified by match to protein family HMM PF07690 gene gene2264 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3012 BCG9842_B3013 BCG9842_B3013 BCG9842_B3013 2167033 2169531 + penicillin-binding protein 1A/1B identified by match to protein family HMM PF00905%3B match to protein family HMM PF00912%3B match to protein family HMM TIGR02074 gene gene2263 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3013 BCG9842_B3014 BCG9842_B3014 BCG9842_B3014 2166357 2166566 - conserved hypothetical protein gene gene2262 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3014 BCG9842_B3015 BCG9842_B3015 BCG9842_B3015 2166080 2166292 + conserved hypothetical protein identified by match to protein family HMM PF01679 gene gene2261 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3015 BCG9842_B3016 BCG9842_B3016 BCG9842_B3016 2165291 2165965 + conserved hypothetical protein gene gene2260 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3016 BCG9842_B3017 BCG9842_B3017 BCG9842_B3017 2164442 2165149 + short chain dehydrogenase identified by match to protein family HMM PF00106 gene gene2259 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3017 BCG9842_B3018 BCG9842_B3018 BCG9842_B3018 2163718 2164056 + conserved hypothetical protein gene gene2258 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3018 BCG9842_B3019 BCG9842_B3019 gerPF2 gerPF2 2163296 2163511 - spore germination protein GerPF gene gene2257 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3019 BCG9842_B3020 BCG9842_B3020 BCG9842_B3020 2162752 2163087 + hypothetical cytosolic protein pX02-70 identified by match to protein family HMM PF08863 gene gene2256 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3020 BCG9842_B3021 BCG9842_B3021 BCG9842_B3021 2162016 2162303 + conserved hypothetical protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts gene gene2255 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3021 BCG9842_B3022 BCG9842_B3022 BCG9842_B3022 2161559 2161771 + conserved domain protein gene gene2254 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3022 BCG9842_B3023 BCG9842_B3023 prsA3 prsA3 2160260 2161141 + peptidylprolyl isomerase PrsA3 identified by match to protein family HMM PF00639 gene gene2253 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3023 BCG9842_B3024 BCG9842_B3024 BCG9842_B3024 2159095 2160093 + N-acetylmuramoyl-L-alanine amidase identified by match to protein family HMM PF01183 gene gene2252 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3024 BCG9842_B3025 BCG9842_B3025 BCG9842_B3025 2158009 2158599 + group-specific protein gene gene2251 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3025 BCG9842_B3026 BCG9842_B3026 BCG9842_B3026 2156279 2156854 + conserved hypothetical protein gene gene2250 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3026 BCG9842_B3027 BCG9842_B3027 BCG9842_B3027 2155724 2156125 + hypothetical protein identified by glimmer%3B putative gene gene2249 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3027 BCG9842_B3028 BCG9842_B3028 BCG9842_B3028 2155200 2155451 + hypothetical protein identified by glimmer%3B putative gene gene2248 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3028 BCG9842_B3029 BCG9842_B3029 BCG9842_B3029 2154781 2155056 + group-specific protein gene gene2247 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3029 BCG9842_B3030 BCG9842_B3030 BCG9842_B3030 2153646 2153801 + hypothetical protein identified by glimmer%3B putative gene gene2245 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3030 BCG9842_B3031 BCG9842_B3031 BCG9842_B3031 2153787 2154101 - thioredoxin identified by match to protein family HMM PF00085 gene gene2246 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3031 BCG9842_B3032 BCG9842_B3032 BCG9842_B3032 2151921 2152562 + PAP2 family protein identified by match to protein family HMM PF01569 gene gene2243 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3032 BCG9842_B3033 BCG9842_B3033 BCG9842_B3033 2152552 2153433 - cation efflux family protein identified by match to protein family HMM PF01545%3B match to protein family HMM TIGR01297 gene gene2244 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3033 BCG9842_B3034 BCG9842_B3034 BCG9842_B3034 2151094 2151849 + putative sporulation-control protein Spo0M identified by match to protein family HMM PF07070 gene gene2242 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3034 BCG9842_B3035 BCG9842_B3035 BCG9842_B3035 2150291 2151112 + protein kinase domain protein gene gene2241 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3035 BCG9842_B3036 BCG9842_B3036 BCG9842_B3036 2150109 2150291 + hypothetical protein identified by glimmer%3B putative gene gene2240 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3036 BCG9842_B3037 BCG9842_B3037 BCG9842_B3037 2149818 2149997 + conserved hypothetical protein gene gene2239 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3037 BCG9842_B3038 BCG9842_B3038 BCG9842_B3038 2149513 2149668 - hypothetical protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts%3B identified by glimmer%3B putative gene gene2238 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3038 BCG9842_B3039 BCG9842_B3039 BCG9842_B3039 2148846 2149508 + conserved hypothetical protein gene gene2237 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3039 BCG9842_B3040 BCG9842_B3040 BCG9842_B3040 2148391 2148606 + conserved hypothetical protein identified by match to protein family HMM PF06855 gene gene2236 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3040 BCG9842_B3041 BCG9842_B3041 BCG9842_B3041 2148046 2148318 + conserved hypothetical protein gene gene2235 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3041 BCG9842_B3042 BCG9842_B3042 kamA kamA 2146628 2148049 + L-lysine 2%2C3-aminomutase identified by match to protein family HMM PF04055%3B match to protein family HMM TIGR00238 gene gene2234 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3042 BCG9842_B3043 BCG9842_B3043 rocR2 rocR2 2144984 2146417 + arginine utilization regulatory protein RocR identified by match to protein family HMM PF00158%3B match to protein family HMM PF02954%3B match to protein family HMM PF07728%3B match to protein family HMM PF08448%3B match to protein family HMM TIGR00229 gene gene2233 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3043 BCG9842_B3044 BCG9842_B3044 BCG9842_B3044 2143989 2144888 + beta-lysine acetyltransferase identified by match to protein family HMM PF00583 gene gene2232 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3044 BCG9842_B3045 BCG9842_B3045 BCG9842_B3045 2142724 2143992 + peptidase%2C M20/M25/M40 family identified by match to protein family HMM PF01546%3B match to protein family HMM PF07687%3B match to protein family HMM TIGR01910 gene gene2231 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3045 BCG9842_B3046 BCG9842_B3046 BCG9842_B3046 2142046 2142708 + CoA-transferase%2C beta subunit identified by match to protein family HMM PF01144%3B match to protein family HMM TIGR02428 gene gene2230 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3046 BCG9842_B3047 BCG9842_B3047 atoD atoD 2141363 2142061 + acetate CoA-transferase%2C subunit A identified by match to protein family HMM PF01144%3B match to protein family HMM TIGR02429 gene gene2229 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3047 BCG9842_B3048 BCG9842_B3048 BCG9842_B3048 2140056 2141366 + aminotransferase%2C class III identified by match to protein family HMM PF00202 gene gene2228 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3048 BCG9842_B3049 BCG9842_B3049 BCG9842_B3049 2139137 2139283 + hypothetical protein identified by glimmer%3B putative gene gene2227 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3049 BCG9842_B3050 BCG9842_B3050 BCG9842_B3050 2138355 2139104 - conserved hypothetical protein gene gene2226 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3050 BCG9842_B3051 BCG9842_B3051 BCG9842_B3051 2138040 2138321 + sensor histidine kinase an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF02518 gene gene2225 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3051 BCG9842_B3052 BCG9842_B3052 BCG9842_B3052 2137187 2138053 + histidine protein kinase an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF00512%3B match to protein family HMM PF09385 gene gene2224 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3052 BCG9842_B3053 BCG9842_B3053 BCG9842_B3053 2136557 2136949 - conserved hypothetical protein identified by match to protein family HMM PF07997 gene gene2223 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3053 BCG9842_B3054 BCG9842_B3054 BCG9842_B3054 2135029 2136453 + aldehyde dehydrogenase family protein identified by match to protein family HMM PF00171 gene gene2222 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3054 BCG9842_B3055 BCG9842_B3055 BCG9842_B3055 2133565 2134896 + CBS domain protein identified by match to protein family HMM PF00571%3B match to protein family HMM PF01595%3B match to protein family HMM PF03471 gene gene2221 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3055 BCG9842_B3056 BCG9842_B3056 BCG9842_B3056 2132644 2133186 - conserved hypothetical protein gene gene2220 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3056 BCG9842_B3057 BCG9842_B3057 BCG9842_B3057 2131951 2132547 + hypothetical protein identified by glimmer%3B putative gene gene2219 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3057 BCG9842_B3058 BCG9842_B3058 BCG9842_B3058 2129824 2131674 + hypothetical protein identified by glimmer%3B putative gene gene2218 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3058 BCG9842_B3059 BCG9842_B3059 BCG9842_B3059 2128017 2129834 + conserved domain protein identified by match to protein family HMM PF07728 gene gene2217 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3059 BCG9842_B3060 BCG9842_B3060 BCG9842_B3060 2127651 2127911 + lemA domain protein gene gene2216 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3060 BCG9842_B3061 BCG9842_B3061 arcD arcD 2126146 2127573 + arginine/ornithine antiporter identified by match to protein family HMM PF00324%3B match to protein family HMM TIGR00905 gene gene2215 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3061 BCG9842_B3062 BCG9842_B3062 BCG9842_B3062 2124421 2125932 + glycine betaine/L-proline ABC transporter%2C permease and substrate-binding protein identified by match to protein family HMM PF00528%3B match to protein family HMM PF04069 gene gene2214 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3062 BCG9842_B3063 BCG9842_B3063 proV1 proV1 2123470 2124417 + glycine betaine/L-proline ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005%3B match to protein family HMM TIGR01186 gene gene2213 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3063 BCG9842_B3064 BCG9842_B3064 BCG9842_B3064 2122833 2123369 + conserved hypothetical protein identified by match to protein family HMM PF02698 gene gene2212 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3064 BCG9842_B3065 BCG9842_B3065 BCG9842_B3065 2121518 2122747 + putative permease identified by match to protein family HMM PF07690 gene gene2211 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3065 BCG9842_B3066 BCG9842_B3066 BCG9842_B3066 2120980 2121516 + azoreductase identified by match to protein family HMM PF03358 gene gene2210 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3066 BCG9842_B3067 BCG9842_B3067 BCG9842_B3067 2119681 2120835 + conserved hypothetical protein gene gene2209 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3067 BCG9842_B3068 BCG9842_B3068 BCG9842_B3068 2118426 2119646 + glycosyl transferase%2C group 2 family protein identified by match to protein family HMM PF00535 gene gene2208 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3068 BCG9842_B3069 BCG9842_B3069 BCG9842_B3069 2117522 2118196 - YwbB gene gene2207 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3069 BCG9842_B3070 BCG9842_B3070 gnd gnd 2116557 2117453 + 6-phosphogluconate dehydrogenase (decarboxylating) identified by match to protein family HMM PF00393%3B match to protein family HMM PF03446%3B match to protein family HMM TIGR00872 gene gene2206 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3070 BCG9842_B3071 BCG9842_B3071 BCG9842_B3071 2115189 2116538 + high-affinity gluconate transporter identified by match to protein family HMM PF02447%3B match to protein family HMM PF03600%3B match to protein family HMM TIGR00791 gene gene2205 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3071 BCG9842_B3072 BCG9842_B3072 gntK_2 gntK_2 2113636 2115171 + gluconate kinase identified by match to protein family HMM PF00370%3B match to protein family HMM PF02782%3B match to protein family HMM TIGR01314 gene gene2204 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3072 BCG9842_B3073 BCG9842_B3073 BCG9842_B3073 2112173 2113075 - putative membrane protein identified by match to protein family HMM PF00528 gene gene2203 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3073 BCG9842_B3074 BCG9842_B3074 BCG9842_B3074 2111157 2112176 - putative membrane protein identified by match to protein family HMM PF00528 gene gene2202 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3074 BCG9842_B3075 BCG9842_B3075 BCG9842_B3075 2109968 2111005 + putative alcohol dehydrogenase%2C zinc-containing identified by match to protein family HMM PF00107%3B match to protein family HMM PF08240 gene gene2201 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3075 BCG9842_B3076 BCG9842_B3076 BCG9842_B3076 2108799 2109662 + phenazine biosynthesis protein PhzF identified by match to protein family HMM PF02567%3B match to protein family HMM TIGR00654 gene gene2200 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3076 BCG9842_B3077 BCG9842_B3077 BCG9842_B3077 2107782 2108636 + transcriptional regulator%2C RpiR family identified by match to protein family HMM PF01380%3B match to protein family HMM PF01418 gene gene2199 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3077 BCG9842_B3078 BCG9842_B3078 BCG9842_B3078 2106937 2107578 + DNA-binding response regulator%2C LuxR family identified by match to protein family HMM PF00072%3B match to protein family HMM PF00196%3B match to protein family HMM PF08281 gene gene2198 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3078 BCG9842_B3079 BCG9842_B3079 BCG9842_B3079 2105804 2106922 + sensor histidine kinase identified by match to protein family HMM PF01590%3B match to protein family HMM PF02518%3B match to protein family HMM PF07730 gene gene2197 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3079 BCG9842_B3080 BCG9842_B3080 BCG9842_B3080 2104752 2105645 + mechanosensitive ion channel family protein identified by match to protein family HMM PF00924 gene gene2196 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3080 BCG9842_B3081 BCG9842_B3081 BCG9842_B3081 2104071 2104520 - mutT/nudix family protein identified by match to protein family HMM PF00293 gene gene2195 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3081 BCG9842_B3082 BCG9842_B3082 BCG9842_B3082 2103488 2104036 + isochorismatase family protein identified by match to protein family HMM PF00857 gene gene2194 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3082 BCG9842_B3083 BCG9842_B3083 BCG9842_B3083 2102564 2103052 + putative lipoprotein gene gene2193 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3083 BCG9842_B3084 BCG9842_B3084 BCG9842_B3084 2102311 2102436 + hypothetical protein identified by glimmer%3B putative gene gene2192 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3084 BCG9842_B3085 BCG9842_B3085 BCG9842_B3085 2101674 2102321 + nitroreductase family protein identified by match to protein family HMM PF00881 gene gene2191 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3085 BCG9842_B3086 BCG9842_B3086 dat1 dat1 2100700 2101575 + D-amino acid aminotransferase identified by match to protein family HMM PF01063%3B match to protein family HMM TIGR01121 gene gene2190 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3086 BCG9842_B3087 BCG9842_B3087 BCG9842_B3087 2099611 2100573 + putative iron compound-binding protein identified by match to protein family HMM PF01497 gene gene2189 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3087 BCG9842_B3088 BCG9842_B3088 BCG9842_B3088 2098385 2099371 + sporulation-specific N-acetylmuramoyl-L-alanine amidase identified by match to protein family HMM PF01520%3B match to protein family HMM PF08239 gene gene2188 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3088 BCG9842_B3089 BCG9842_B3089 BCG9842_B3089 2097947 2098282 + hypothetical protein identified by glimmer%3B putative gene gene2187 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3089 BCG9842_B3090 BCG9842_B3090 BCG9842_B3090 2097542 2097901 + acetyltransferase%2C GNAT family identified by match to protein family HMM PF00583 gene gene2186 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3090 BCG9842_B3091 BCG9842_B3091 asnO3 asnO3 2095547 2097448 + asparagine synthetase%2C glutamine-hydrolyzing identified by match to protein family HMM PF00310%3B match to protein family HMM PF00733%3B match to protein family HMM TIGR01536 gene gene2185 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3091 BCG9842_B3092 BCG9842_B3092 BCG9842_B3092 2094868 2095329 - heat shock protein%2C Hsp20 family identified by match to protein family HMM PF00011%3B match to protein family HMM PF04969 gene gene2184 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3092 BCG9842_B3093 BCG9842_B3093 BCG9842_B3093 2094246 2094833 + SCO1/SenC family lipoprotein identified by match to protein family HMM PF02630 gene gene2183 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3093 BCG9842_B3094 BCG9842_B3094 BCG9842_B3094 2093909 2094037 + hypothetical protein identified by glimmer%3B putative gene gene2182 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3094 BCG9842_B3095 BCG9842_B3095 BCG9842_B3095 2092936 2093910 - conserved hypothetical protein gene gene2181 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3095 BCG9842_B3096 BCG9842_B3096 BCG9842_B3096 2091797 2092660 + degV family protein identified by match to protein family HMM PF02645%3B match to protein family HMM TIGR00762 gene gene2180 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3096 BCG9842_B3097 BCG9842_B3097 BCG9842_B3097 2091393 2091665 + conserved hypothetical protein gene gene2179 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3097 BCG9842_B3098 BCG9842_B3098 BCG9842_B3098 2090359 2091084 + TatCD protein identified by match to protein family HMM PF00902%3B match to protein family HMM TIGR00945 gene gene2178 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3098 BCG9842_B3099 BCG9842_B3099 BCG9842_B3099 2090116 2090301 + twin-arginine translocation protein%2C TatA/E family identified by match to protein family HMM PF02416%3B match to protein family HMM TIGR01411 gene gene2177 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3099 BCG9842_B3100 BCG9842_B3100 BCG9842_B3100 2089246 2089902 - hemolysin III identified by match to protein family HMM PF03006%3B match to protein family HMM TIGR01065 gene gene2176 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3100 BCG9842_B3101 BCG9842_B3101 BCG9842_B3101 2088485 2089204 + putative 1-acyl-sn-glycerol-3-phosphate acyltransferase identified by match to protein family HMM PF01553%3B match to protein family HMM TIGR00530 gene gene2175 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3101 BCG9842_B3102 BCG9842_B3102 BCG9842_B3102 2087738 2088373 + conserved hypothetical protein identified by match to protein family HMM PF02525%3B match to protein family HMM PF03358 gene gene2174 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3102 BCG9842_B3103 BCG9842_B3103 pbpC pbpC 2085513 2087498 + penicillin-binding protein 3 identified by match to protein family HMM PF00905%3B match to protein family HMM PF03717%3B match to protein family HMM PF05223 gene gene2173 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3103 BCG9842_B3104 BCG9842_B3104 dfrA dfrA 2084868 2085356 + dihydrofolate reductase identified by match to protein family HMM PF00186 gene gene2172 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3104 BCG9842_B3105 BCG9842_B3105 thyA thyA 2083892 2084848 + thymidylate synthase identified by match to protein family HMM PF00303%3B match to protein family HMM TIGR03284 gene gene2171 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3105 BCG9842_B3106 BCG9842_B3106 BCG9842_B3106 2082236 2083693 - conserved hypothetical protein identified by match to protein family HMM PF00144 gene gene2170 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3106 BCG9842_B3107 BCG9842_B3107 BCG9842_B3107 2081253 2082185 + conserved hypothetical protein identified by match to protein family HMM PF01636 gene gene2169 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3107 BCG9842_B3108 BCG9842_B3108 BCG9842_B3108 2080855 2081241 + conserved hypothetical protein identified by match to protein family HMM PF00903 gene gene2168 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3108 BCG9842_B3109 BCG9842_B3109 BCG9842_B3109 2080218 2080853 + hydrolase%2C haloacid dehalogenase-like family identified by match to protein family HMM PF00702%3B match to protein family HMM TIGR01549 gene gene2167 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3109 BCG9842_B3110 BCG9842_B3110 BCG9842_B3110 2079524 2080111 + conserved hypothetical protein gene gene2166 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3110 BCG9842_B3111 BCG9842_B3111 BCG9842_B3111 2078204 2079241 + conserved hypothetical protein gene gene2165 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3111 BCG9842_B3112 BCG9842_B3112 BCG9842_B3112 2077684 2078055 + ABC transporter%2C ATP-binding protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift gene gene2164 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3112 BCG9842_B3113 BCG9842_B3113 BCG9842_B3113 2077344 2077691 + ABC-type transporter ATP-binding protein EcsA an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift gene gene2163 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3113 BCG9842_B3114 BCG9842_B3114 BCG9842_B3114 2076758 2077189 - acetyltransferase%2C GNAT family identified by match to protein family HMM PF00583 gene gene2162 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3114 BCG9842_B3115 BCG9842_B3115 BCG9842_B3115 2076201 2076728 - conserved hypothetical protein identified by match to protein family HMM TIGR01549%3B match to protein family HMM TIGR01656%3B match to protein family HMM TIGR01662 gene gene2161 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3115 BCG9842_B3116 BCG9842_B3116 BCG9842_B3116 2075879 2076052 + transcription regulator%2C Cro/CI family -related protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a premature stop gene gene2160 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3116 BCG9842_B3117 BCG9842_B3117 BCG9842_B3117 2075434 2075823 + YoaS gene gene2159 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3117 BCG9842_B3118 BCG9842_B3118 BCG9842_B3118 2074719 2075159 + acetyltransferase%2C GNAT family identified by match to protein family HMM PF00583 gene gene2158 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3118 BCG9842_B3119 BCG9842_B3119 BCG9842_B3119 2074249 2074722 + conserved hypothetical protein identified by match to protein family HMM PF01980 gene gene2157 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3119 BCG9842_B3120 BCG9842_B3120 BCG9842_B3120 2073465 2074160 + aspartate racemase family protein identified by match to protein family HMM PF01177%3B match to protein family HMM TIGR00035 gene gene2156 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3120 BCG9842_B3121 BCG9842_B3121 BCG9842_B3121 2072077 2073279 + alcohol dehydrogenase%2C iron-containing identified by match to protein family HMM PF00465 gene gene2155 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3121 BCG9842_B3122 BCG9842_B3122 BCG9842_B3122 2070559 2071998 + putative membrane protein identified by match to protein family HMM PF03600 gene gene2154 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3122 BCG9842_B3123 BCG9842_B3123 BCG9842_B3123 2069688 2070353 + hydrolase%2C haloacid dehalogenase-like family identified by match to protein family HMM PF00702%3B match to protein family HMM TIGR01549 gene gene2153 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3123 BCG9842_B3124 BCG9842_B3124 BCG9842_B3124 2068700 2069497 - putative membrane protein gene gene2152 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3124 BCG9842_B3125 BCG9842_B3125 BCG9842_B3125 2068100 2068675 - conserved hypothetical protein identified by match to protein family HMM PF06042 gene gene2151 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3125 BCG9842_B3126 BCG9842_B3126 BCG9842_B3126 2067158 2068063 + hydrolase%2C alpha/beta fold family identified by match to protein family HMM PF00561 gene gene2150 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3126 BCG9842_B3127 BCG9842_B3127 BCG9842_B3127 2065771 2067111 + putative sodium-dependent transporter identified by match to protein family HMM PF00209 gene gene2149 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3127 BCG9842_B3128 BCG9842_B3128 aspS1 aspS1 2063949 2065247 + aspartyl-tRNA synthetase identified by match to protein family HMM PF00152%3B match to protein family HMM PF01336%3B match to protein family HMM TIGR00458 gene gene2148 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3128 BCG9842_B3129 BCG9842_B3129 BCG9842_B3129 2062925 2063404 - hypothetical protein identified by glimmer%3B putative gene gene2147 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3129 BCG9842_B3130 BCG9842_B3130 BCG9842_B3130 2061307 2062818 + putative neutral metalloprotease identified by match to protein family HMM PF03413%3B match to protein family HMM PF07504 gene gene2146 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3130 BCG9842_B3131 BCG9842_B3131 ileS1 ileS1 2057884 2060985 + isoleucyl-tRNA synthetase identified by match to protein family HMM PF00133%3B match to protein family HMM PF08264%3B match to protein family HMM PF09334%3B match to protein family HMM TIGR00392 gene gene2145 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3131 BCG9842_B3132 BCG9842_B3132 BCG9842_B3132 2053295 2057497 + tetratricopeptide repeat protein identified by match to protein family HMM PF00515%3B match to protein family HMM PF07719 gene gene2144 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3132 BCG9842_B3133 BCG9842_B3133 BCG9842_B3133 2052223 2052714 + methyltransferase gene gene2143 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3133 BCG9842_B3134 BCG9842_B3134 BCG9842_B3134 2051893 2052111 + hypothetical protein identified by glimmer%3B putative gene gene2142 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3134 BCG9842_B3135 BCG9842_B3135 argS1 argS1 2049733 2051421 + arginyl-tRNA synthetase identified by match to protein family HMM PF00750%3B match to protein family HMM PF03485%3B match to protein family HMM PF05746%3B match to protein family HMM TIGR00456 gene gene2141 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3135 BCG9842_B3136 BCG9842_B3136 BCG9842_B3136 2048656 2049432 + conserved hypothetical protein gene gene2140 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3136 BCG9842_B3137 BCG9842_B3137 BCG9842_B3137 2048172 2048606 + conserved hypothetical protein identified by match to protein family HMM PF06491 gene gene2139 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3137 BCG9842_B3138 BCG9842_B3138 BCG9842_B3138 2047705 2048088 + hypothetical protein identified by glimmer%3B putative gene gene2138 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3138 BCG9842_B3139 BCG9842_B3139 BCG9842_B3139 2046574 2047701 + PBS lyase HEAT-like repeat domain protein identified by match to protein family HMM PF03130 gene gene2137 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3139 BCG9842_B3140 BCG9842_B3140 BCG9842_B3140 2045594 2046154 - shikimate kinase gene gene2136 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3140 BCG9842_B3141 BCG9842_B3141 BCG9842_B3141 2045262 2045390 + hypothetical protein identified by glimmer%3B putative gene gene2135 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3141 BCG9842_B3142 BCG9842_B3142 ssb2 ssb2 2044920 2045255 + single-stranded DNA-binding protein identified by match to protein family HMM PF00436%3B match to protein family HMM PF01336%3B match to protein family HMM TIGR00621 gene gene2134 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3142 BCG9842_B3143 BCG9842_B3143 BCG9842_B3143 2044504 2044758 + hypothetical protein identified by glimmer%3B putative gene gene2133 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3143 BCG9842_B3144 BCG9842_B3144 BCG9842_B3144 2043666 2044397 + putative membrane protein identified by match to protein family HMM PF06539 gene gene2132 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3144 BCG9842_B3145 BCG9842_B3145 BCG9842_B3145 2041695 2043590 + ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005 gene gene2131 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3145 BCG9842_B3146 BCG9842_B3146 BCG9842_B3146 2041051 2041698 + HD domain protein identified by match to protein family HMM PF01966 gene gene2130 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3146 BCG9842_B3147 BCG9842_B3147 BCG9842_B3147 2040902 2041054 + hypothetical protein identified by glimmer%3B putative gene gene2129 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3147 BCG9842_B3148 BCG9842_B3148 BCG9842_B3148 2040078 2040941 - group-specific protein gene gene2128 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3148 BCG9842_B3149 BCG9842_B3149 BCG9842_B3149 2039656 2039781 + conserved domain protein gene gene2127 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3149 BCG9842_B3150 BCG9842_B3150 BCG9842_B3150 2038586 2039659 + response regulator aspartate phosphatase identified by match to protein family HMM PF00515 gene gene2126 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3150 BCG9842_B3151 BCG9842_B3151 BCG9842_B3151 2038048 2038395 - IG hypothetical 15966 identified by match to protein family HMM PF08863 gene gene2125 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3151 BCG9842_B3152 BCG9842_B3152 BCG9842_B3152 2037651 2037788 + McrA gene gene2124 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3152 BCG9842_B3153 BCG9842_B3153 BCG9842_B3153 2037138 2037401 + hypothetical protein identified by glimmer%3B putative gene gene2123 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3153 BCG9842_B3154 BCG9842_B3154 BCG9842_B3154 2036664 2036939 + stage V sporulation protein S identified by match to protein family HMM PF04232 gene gene2122 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3154 BCG9842_B3155 BCG9842_B3155 BCG9842_B3155 2035503 2036051 - conserved hypothetical protein gene gene2121 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3155 BCG9842_B3156 BCG9842_B3156 BCG9842_B3156 2033746 2035347 + conserved hypothetical protein identified by match to protein family HMM PF07819 gene gene2120 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3156 BCG9842_B3157 BCG9842_B3157 BCG9842_B3157 2032353 2033192 - N-acetyltransferase family protein identified by match to protein family HMM PF00797 gene gene2119 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3157 BCG9842_B3158 BCG9842_B3158 BCG9842_B3158 2032047 2032256 + hypothetical protein identified by glimmer%3B putative gene gene2118 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3158 BCG9842_B3159 BCG9842_B3159 BCG9842_B3159 2031676 2031828 + hypothetical protein identified by glimmer%3B putative gene gene2117 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3159 BCG9842_B3160 BCG9842_B3160 BCG9842_B3160 2030476 2031468 - conserved domain protein identified by match to protein family HMM PF05901 gene gene2116 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3160 BCG9842_B3161 BCG9842_B3161 scdA scdA 2029553 2030260 - ScdA protein identified by match to protein family HMM PF01814%3B match to protein family HMM PF04405 gene gene2115 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3161 BCG9842_B3162 BCG9842_B3162 nirB nirB 2026939 2029344 - nitrite reductase [NAD(P)H]%2C large subunit identified by match to protein family HMM PF00070%3B match to protein family HMM PF01077%3B match to protein family HMM PF03460%3B match to protein family HMM PF04324%3B match to protein family HMM PF07992%3B match to protein family HMM TIGR02374 gene gene2114 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3162 BCG9842_B3163 BCG9842_B3163 nirD nirD 2026606 2026923 - nitrite reductase [NAD(P)H]%2C small subunit identified by match to protein family HMM PF00355%3B match to protein family HMM TIGR02378 gene gene2113 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3163 BCG9842_B3164 BCG9842_B3164 BCG9842_B3164 2025123 2026547 - putative uroporphyrin-III C-methyltransferase identified by match to protein family HMM PF00590%3B match to protein family HMM TIGR01469 gene gene2112 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3164 BCG9842_B3165 BCG9842_B3165 BCG9842_B3165 2024416 2025126 - cbiX domain protein identified by match to protein family HMM PF01903 gene gene2111 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3165 BCG9842_B3166 BCG9842_B3166 BCG9842_B3166 2023950 2024423 - siroheme synthase%2C precorrin 2 oxidase and ferrochelatase domains identified by match to protein family HMM TIGR01470 gene gene2110 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3166 BCG9842_B3167 BCG9842_B3167 BCG9842_B3167 2023385 2023762 + conserved domain protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift gene gene2109 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3167 BCG9842_B3168 BCG9842_B3168 BCG9842_B3168 2023034 2023171 + transposase gene gene2108 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3168 BCG9842_B3169 BCG9842_B3169 BCG9842_B3169 2022120 2023037 + putative membrane protein identified by match to protein family HMM PF03547 gene gene2107 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3169 BCG9842_B3170 BCG9842_B3170 narK narK 2020363 2021532 + nitrate transporter identified by match to protein family HMM PF07690 gene gene2106 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3170 BCG9842_B3171 BCG9842_B3171 moaD1 moaD1 2020049 2020282 + molybdopterin converting factor%2C subunit 1 identified by match to protein family HMM PF02597%3B match to protein family HMM TIGR01682 gene gene2105 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3171 BCG9842_B3172 BCG9842_B3172 moaE1 moaE1 2019582 2020052 + molybdopterin converting factor%2C subunit 2 identified by match to protein family HMM PF02391 gene gene2104 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3172 BCG9842_B3173 BCG9842_B3173 moeA1 moeA1 2018248 2019537 + molybdopterin biosynthesis protein MoeA identified by match to protein family HMM PF00994%3B match to protein family HMM PF03453%3B match to protein family HMM PF03454%3B match to protein family HMM TIGR00177 gene gene2103 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3173 BCG9842_B3174 BCG9842_B3174 BCG9842_B3174 2017192 2018205 + putative molybdopterin biosynthesis protein MoeB identified by match to protein family HMM PF00899%3B match to protein family HMM PF05237 gene gene2102 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3174 BCG9842_B3175 BCG9842_B3175 narA1 narA1 2016161 2017174 + molybdenum cofactor biosynthesis protein A identified by match to protein family HMM PF04055%3B match to protein family HMM PF06463%3B match to protein family HMM TIGR02666 gene gene2101 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3175 BCG9842_B3176 BCG9842_B3176 BCG9842_B3176 2015143 2015835 - transcriptional regulator%2C Crp/Fnr family identified by match to protein family HMM PF00027%3B match to protein family HMM PF00325 gene gene2100 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3176 BCG9842_B3177 BCG9842_B3177 narI narI 2014317 2015006 + respiratory nitrate reductase%2C gamma subunit identified by match to protein family HMM PF02665%3B match to protein family HMM TIGR00351 gene gene2099 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3177 BCG9842_B3178 BCG9842_B3178 narJ narJ 2013769 2014299 + nitrate reductase molybdenum cofactor assembly chaperone identified by match to protein family HMM PF02613%3B match to protein family HMM TIGR00684 gene gene2098 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3178 BCG9842_B3179 BCG9842_B3179 narH narH 2012388 2013749 + respiratory nitrate reductase%2C beta subunit identified by match to protein family HMM TIGR01660 gene gene2097 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3179 BCG9842_B3180 BCG9842_B3180 narG narG 2008601 2012284 + respiratory nitrate reductase%2C alpha subunit identified by match to protein family HMM PF00384%3B match to protein family HMM PF01568%3B match to protein family HMM TIGR01580 gene gene2096 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3180 BCG9842_B3181 BCG9842_B3181 BCG9842_B3181 2007087 2008049 - MoxR protein identified by match to protein family HMM PF07726%3B match to protein family HMM PF07728 gene gene2095 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3181 BCG9842_B3182 BCG9842_B3182 BCG9842_B3182 2005873 2007087 - conserved hypothetical protein identified by match to protein family HMM PF01882 gene gene2094 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3182 BCG9842_B3183 BCG9842_B3183 BCG9842_B3183 2003648 2005876 - putative membrane-bound protease identified by match to protein family HMM PF01841 gene gene2093 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3183 BCG9842_B3184 BCG9842_B3184 bsaA bsaA 2003082 2003564 + glutathione peroxidase identified by match to protein family HMM PF00255 gene gene2092 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3184 BCG9842_B3185 BCG9842_B3185 BCG9842_B3185 2002648 2002857 - hypothetical protein identified by glimmer%3B putative gene gene2091 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3185 BCG9842_B3186 BCG9842_B3186 BCG9842_B3186 2001581 2002552 - metallo-beta-lactamase family protein identified by match to protein family HMM PF00753 gene gene2090 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3186 BCG9842_B3187 BCG9842_B3187 BCG9842_B3187 2001061 2001495 - hypothetical protein identified by glimmer%3B putative gene gene2089 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3187 BCG9842_B3188 BCG9842_B3188 BCG9842_B3188 1999004 2000950 - ABC1 family protein identified by match to protein family HMM PF03109 gene gene2088 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3188 BCG9842_B3189 BCG9842_B3189 BCG9842_B3189 1998220 1998900 + hypothetical protein identified by glimmer%3B putative gene gene2087 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3189 BCG9842_B3190 BCG9842_B3190 BCG9842_B3190 1997645 1998223 + RNA polymerase sigma-70 factor%2C ECF subfamily identified by match to protein family HMM PF04542%3B match to protein family HMM PF04545%3B match to protein family HMM PF08281%3B match to protein family HMM TIGR02937 gene gene2086 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3190 BCG9842_B3191 BCG9842_B3191 BCG9842_B3191 1996455 1997441 - oxidoreductase%2C zinc-binding dehydrogenase family identified by match to protein family HMM PF00107%3B match to protein family HMM PF08240 gene gene2085 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3191 BCG9842_B3192 BCG9842_B3192 BCG9842_B3192 1995787 1996425 - conserved hypothetical protein gene gene2084 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3192 BCG9842_B3193 BCG9842_B3193 BCG9842_B3193 1995359 1995742 + glyoxalase family protein identified by match to protein family HMM PF00903 gene gene2083 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3193 BCG9842_B3194 BCG9842_B3194 BCG9842_B3194 1994493 1995302 + conserved hypothetical protein identified by match to protein family HMM PF01261 gene gene2082 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3194 BCG9842_B3195 BCG9842_B3195 BCG9842_B3195 1993133 1994302 + ATP-dependent RNA helicase%2C DEAD/DEAH box family identified by match to protein family HMM PF00270%3B match to protein family HMM PF00271%3B match to protein family HMM PF04851 gene gene2081 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3195 BCG9842_B3196 BCG9842_B3196 BCG9842_B3196 1992586 1993113 + group-specific protein gene gene2080 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3196 BCG9842_B3197 BCG9842_B3197 fhs fhs 1990807 1992495 + formate--tetrahydrofolate ligase identified by match to protein family HMM PF01268 gene gene2079 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3197 BCG9842_B3198 BCG9842_B3198 BCG9842_B3198 1990032 1990712 + methyltransferase an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF01209%3B match to protein family HMM PF05724%3B match to protein family HMM PF08241%3B match to protein family HMM PF08242 gene gene2078 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3198 BCG9842_B3199 BCG9842_B3199 BCG9842_B3199 1989358 1989696 - conserved hypothetical protein gene gene2077 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3199 BCG9842_B3200 BCG9842_B3200 BCG9842_B3200 1989116 1989328 + hypothetical protein identified by glimmer%3B putative gene gene2076 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3200 BCG9842_B3201 BCG9842_B3201 BCG9842_B3201 1988726 1989046 + hypothetical protein identified by glimmer%3B putative gene gene2075 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3201 BCG9842_B3202 BCG9842_B3202 BCG9842_B3202 1987898 1988674 + conserved hypothetical protein gene gene2074 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3202 BCG9842_B3203 BCG9842_B3203 BCG9842_B3203 1987312 1987737 + conserved hypothetical protein identified by match to protein family HMM PF09579%3B match to protein family HMM TIGR02874 gene gene2073 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3203 BCG9842_B3204 BCG9842_B3204 BCG9842_B3204 1986395 1987180 - acetyltransferase identified by match to protein family HMM PF00583 gene gene2072 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3204 BCG9842_B3205 BCG9842_B3205 BCG9842_B3205 1985193 1985966 + conserved hypothetical protein gene gene2071 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3205 BCG9842_B3206 BCG9842_B3206 BCG9842_B3206 1984240 1985016 + conserved hypothetical protein gene gene2070 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3206 BCG9842_B3207 BCG9842_B3207 BCG9842_B3207 1983140 1983778 + conserved hypothetical protein gene gene2069 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3207 BCG9842_B3208 BCG9842_B3208 BCG9842_B3208 1982868 1983101 + hypothetical protein identified by glimmer%3B putative gene gene2068 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3208 BCG9842_B3209 BCG9842_B3209 BCG9842_B3209 1982483 1982833 + lipase class 3 an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts gene gene2067 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3209 BCG9842_B3210 BCG9842_B3210 BCG9842_B3210 1982098 1982244 + hypothetical protein identified by glimmer%3B putative gene gene2066 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3210 BCG9842_B3211 BCG9842_B3211 BCG9842_B3211 1981314 1982126 + conserved hypothetical protein gene gene2065 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3211 BCG9842_B3212 BCG9842_B3212 BCG9842_B3212 1980887 1981243 + hypothetical Cytosolic Protein gene gene2064 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3212 BCG9842_B3213 BCG9842_B3213 BCG9842_B3213 1980625 1980885 + conserved hypothetical protein gene gene2063 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3213 BCG9842_B3214 BCG9842_B3214 BCG9842_B3214 1979002 1980585 + lipase class 3 identified by match to protein family HMM PF01764 gene gene2062 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3214 BCG9842_B3215 BCG9842_B3215 BCG9842_B3215 1978148 1978987 + conserved hypothetical protein gene gene2061 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3215 BCG9842_B3216 BCG9842_B3216 BCG9842_B3216 1973646 1978151 + ftsk/spoiiie family protein identified by match to protein family HMM PF01580 gene gene2060 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3216 BCG9842_B3217 BCG9842_B3217 BCG9842_B3217 1972407 1973606 + hypothetical Membrane Associated Protein gene gene2059 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3217 BCG9842_B3218 BCG9842_B3218 BCG9842_B3218 1972082 1972333 + YukD superfamily identified by match to protein family HMM PF08817 gene gene2058 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3218 BCG9842_B3219 BCG9842_B3219 BCG9842_B3219 1971700 1972077 + hypothetical Membrane Associated Protein gene gene2057 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3219 BCG9842_B3220 BCG9842_B3220 BCG9842_B3220 1967775 1971602 + conserved hypothetical protein gene gene2056 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3220 BCG9842_B3221 BCG9842_B3221 BCG9842_B3221 1967352 1967648 + WXG domain protein identified by match to protein family HMM PF06013 gene gene2055 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3221 BCG9842_B3222 BCG9842_B3222 BCG9842_B3222 1966614 1967042 + acetyltransferase identified by match to protein family HMM PF00583 gene gene2054 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3222 BCG9842_B3223 BCG9842_B3223 BCG9842_B3223 1966245 1966610 + conserved hypothetical protein gene gene2053 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3223 BCG9842_B3224 BCG9842_B3224 BCG9842_B3224 1965747 1966232 + acetyltransferase%2C GNAT family identified by match to protein family HMM PF00583 gene gene2052 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3224 BCG9842_B3225 BCG9842_B3225 BCG9842_B3225 1965190 1965750 + group-specific protein gene gene2051 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3225 BCG9842_B3226 BCG9842_B3226 BCG9842_B3226 1964617 1965183 + acetyltransferase identified by match to protein family HMM PF00583 gene gene2050 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3226 BCG9842_B3227 BCG9842_B3227 BCG9842_B3227 1963854 1964480 - putative membrane protein identified by match to protein family HMM PF07853 gene gene2049 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3227 BCG9842_B3228 BCG9842_B3228 BCG9842_B3228 1962706 1963833 + putative serine/threonine protein phosphatase identified by match to protein family HMM PF00149 gene gene2048 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3228 BCG9842_B3229 BCG9842_B3229 BCG9842_B3229 1962107 1962529 + acetyltransferase%2C GNAT family identified by match to protein family HMM PF00583 gene gene2047 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3229 BCG9842_B3230 BCG9842_B3230 BCG9842_B3230 1960562 1961977 - transcriptional regulator%2C GntR family identified by match to protein family HMM PF00155%3B match to protein family HMM PF00392 gene gene2046 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3230 BCG9842_B3231 BCG9842_B3231 BCG9842_B3231 1959627 1960472 + hypothetical Membrane Spanning Protein identified by match to protein family HMM PF02588 gene gene2045 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3231 BCG9842_B3232 BCG9842_B3232 BCG9842_B3232 1958238 1959446 + glycosyltransferase%2C MGT family identified by match to protein family HMM PF00201%3B match to protein family HMM PF04101%3B match to protein family HMM TIGR01426 gene gene2044 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3232 BCG9842_B3233 BCG9842_B3233 BCG9842_B3233 1956960 1957838 - conserved hypothetical protein gene gene2043 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3233 BCG9842_B3234 BCG9842_B3234 BCG9842_B3234 1956049 1956936 - acetyltransferase%2C GNAT family identified by match to protein family HMM PF00583 gene gene2042 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3234 BCG9842_B3235 BCG9842_B3235 BCG9842_B3235 1955343 1956056 - conserved hypothetical protein identified by match to protein family HMM PF08241%3B match to protein family HMM PF08242 gene gene2041 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3235 BCG9842_B3236 BCG9842_B3236 dal2 dal2 1954147 1955322 + alanine racemase identified by match to protein family HMM PF00842%3B match to protein family HMM PF01168%3B match to protein family HMM TIGR00492 gene gene2040 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3236 BCG9842_B3237 BCG9842_B3237 BCG9842_B3237 1953514 1953975 - conserved hypothetical protein gene gene2039 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3237 BCG9842_B3238 BCG9842_B3238 BCG9842_B3238 1952321 1953505 + TcaB protein identified by match to protein family HMM PF07690 gene gene2038 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3238 BCG9842_B3239 BCG9842_B3239 BCG9842_B3239 1951582 1952127 + transcriptional regulator%2C MarR family identified by match to protein family HMM PF01047 gene gene2037 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3239 BCG9842_B3240 BCG9842_B3240 BCG9842_B3240 1950657 1951433 + hydrolase identified by match to protein family HMM PF00702%3B match to protein family HMM PF05116%3B match to protein family HMM PF08282%3B match to protein family HMM TIGR00099%3B match to protein family HMM TIGR01484 gene gene2036 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3240 BCG9842_B3241 BCG9842_B3241 BCG9842_B3241 1950060 1950650 + phosphoglycerate mutase family protein identified by match to protein family HMM PF00300 gene gene2035 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3241 BCG9842_B3242 BCG9842_B3242 BCG9842_B3242 1948747 1949970 + stage II sporulation protein P an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF07454%3B match to protein family HMM TIGR02867 gene gene2034 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3242 BCG9842_B3243 BCG9842_B3243 BCG9842_B3243 1947776 1948744 + SPFH domain/Band 7 family protein identified by match to protein family HMM PF01145 gene gene2033 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3243 BCG9842_B3244 BCG9842_B3244 BCG9842_B3244 1947345 1947773 + conserved hypothetical protein identified by match to protein family HMM PF01957 gene gene2032 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3244 BCG9842_B3245 BCG9842_B3245 BCG9842_B3245 1946050 1947072 - macrolide-efflux protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a premature stop gene gene2031 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3245 BCG9842_B3246 BCG9842_B3246 BCG9842_B3246 1945873 1946046 - macrolide-efflux protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a premature stop gene gene2030 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3246 BCG9842_B3247 BCG9842_B3247 BCG9842_B3247 1944329 1945804 + amidase family protein identified by match to protein family HMM PF01425 gene gene2029 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3247 BCG9842_B3248 BCG9842_B3248 BCG9842_B3248 1943701 1944147 + mutT/nudix family protein identified by match to protein family HMM PF00293 gene gene2028 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3248 BCG9842_B3249 BCG9842_B3249 BCG9842_B3249 1942937 1943677 + D-alanyl-D-alanine carboxypeptidase family protein identified by match to protein family HMM PF02557 gene gene2027 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3249 BCG9842_B3250 BCG9842_B3250 BCG9842_B3250 1942428 1942925 + acetyltransferase%2C GNAT family identified by match to protein family HMM PF00583 gene gene2026 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3250 BCG9842_B3251 BCG9842_B3251 spoIIP spoIIP 1941017 1942171 + stage II sporulation protein P identified by match to protein family HMM PF07454%3B match to protein family HMM TIGR02867 gene gene2025 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3251 BCG9842_B3252 BCG9842_B3252 BCG9842_B3252 1939822 1940349 + conserved hypothetical protein identified by match to protein family HMM PF07609 gene gene2024 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3252 BCG9842_B3253 BCG9842_B3253 csaA csaA 1939473 1939802 + chaperone CsaA identified by match to protein family HMM PF01588%3B match to protein family HMM TIGR02222 gene gene2023 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3253 BCG9842_B3254 BCG9842_B3254 brnQ4 brnQ4 1938054 1939406 + branched-chain amino acid transport system II carrier protein identified by match to protein family HMM PF05525%3B match to protein family HMM TIGR00796 gene gene2022 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3254 BCG9842_B3255 BCG9842_B3255 BCG9842_B3255 1936966 1937613 + CBS domain protein identified by match to protein family HMM PF00571 gene gene2021 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3255 BCG9842_B3256 BCG9842_B3256 BCG9842_B3256 1936153 1936776 + conserved hypothetical protein gene gene2020 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3256 BCG9842_B3257 BCG9842_B3257 BCG9842_B3257 1935548 1936135 + transcriptional regulator%2C TetR family protein identified by match to protein family HMM PF00440 gene gene2019 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3257 BCG9842_B3258 BCG9842_B3258 BCG9842_B3258 1934331 1935200 - putative membrane protein gene gene2018 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3258 BCG9842_B3259 BCG9842_B3259 BCG9842_B3259 1932815 1934122 - CBS domain protein identified by match to protein family HMM PF00571%3B match to protein family HMM PF01595%3B match to protein family HMM PF03471 gene gene2017 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3259 BCG9842_B3260 BCG9842_B3260 BCG9842_B3260 1932331 1932813 - putative membrane protein identified by match to protein family HMM PF04306 gene gene2016 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3260 BCG9842_B3261 BCG9842_B3261 BCG9842_B3261 1931683 1932306 + putative oxidoreductase identified by match to protein family HMM PF02254 gene gene2015 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3261 BCG9842_B3262 BCG9842_B3262 BCG9842_B3262 1931402 1931581 + putative lipoprotein gene gene2014 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3262 BCG9842_B3263 BCG9842_B3263 BCG9842_B3263 1930717 1931175 + putative spore coat protein F identified by match to protein family HMM PF07875 gene gene2013 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3263 BCG9842_B3264 BCG9842_B3264 BCG9842_B3264 1929552 1930685 + cardiolipin synthetase domain protein identified by match to protein family HMM PF00614 gene gene2012 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3264 BCG9842_B3265 BCG9842_B3265 BCG9842_B3265 1929356 1929502 - hypothetical protein identified by glimmer%3B putative gene gene2011 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3265 BCG9842_B3266 BCG9842_B3266 BCG9842_B3266 1928621 1929127 + cytosolic long-chain acyl-CoA thioester hydrolase family protein identified by match to protein family HMM PF03061 gene gene2010 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3266 BCG9842_B3267 BCG9842_B3267 BCG9842_B3267 1927632 1928501 + conserved hypothetical protein identified by match to protein family HMM PF09323 gene gene2009 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3267 BCG9842_B3268 BCG9842_B3268 BCG9842_B3268 1926732 1927628 + putative membrane protein identified by match to protein family HMM PF03773 gene gene2008 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3268 BCG9842_B3269 BCG9842_B3269 BCG9842_B3269 1925592 1926533 + magnesium transporter%2C CorA family identified by match to protein family HMM PF01544 gene gene2007 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3269 BCG9842_B3270 BCG9842_B3270 BCG9842_B3270 1924029 1925408 + polysaccharide synthase family protein identified by match to protein family HMM PF01554%3B match to protein family HMM PF01943%3B match to protein family HMM PF03023 gene gene2006 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3270 BCG9842_B3271 BCG9842_B3271 BCG9842_B3271 1923324 1923926 + dedA family protein identified by match to protein family HMM PF09335 gene gene2005 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3271 BCG9842_B3272 BCG9842_B3272 BCG9842_B3272 1922602 1923219 + mutT/nudix family protein identified by match to protein family HMM PF00293 gene gene2004 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3272 BCG9842_B3273 BCG9842_B3273 cotH cotH 1921421 1922497 + spore coat protein H identified by match to protein family HMM PF08757 gene gene2003 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3273 BCG9842_B3274 BCG9842_B3274 BCG9842_B3274 1920679 1921239 - hypothetical protein identified by glimmer%3B putative gene gene2002 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3274 BCG9842_B3275 BCG9842_B3275 BCG9842_B3275 1920022 1920633 + phosphoglycerate mutase family protein identified by match to protein family HMM PF00300 gene gene2001 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3275 BCG9842_B3276 BCG9842_B3276 BCG9842_B3276 1919463 1919900 + short chain dehydrogenase an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a premature stop gene gene2000 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3276 BCG9842_B3277 BCG9842_B3277 fosB1 fosB1 1919033 1919449 + metallothiol transferase fosB1 identified by match to protein family HMM PF00903 gene gene1999 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3277 BCG9842_B3278 BCG9842_B3278 BCG9842_B3278 1917312 1918973 + putative oligopeptide ABC transporter%2C oligopeptide-binding protein identified by match to protein family HMM PF00496 gene gene1998 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3278 BCG9842_B3279 BCG9842_B3279 BCG9842_B3279 1916241 1917227 + group-specific protein gene gene1997 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3279 BCG9842_B3280 BCG9842_B3280 ogt1 ogt1 1915763 1916215 + methylated-DNA--protein-cysteine S-methyltransferase identified by match to protein family HMM PF01035%3B match to protein family HMM PF02870%3B match to protein family HMM TIGR00589 gene gene1996 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3280 BCG9842_B3281 BCG9842_B3281 BCG9842_B3281 1914592 1915629 - NADH:flavin oxidoreductase / NADH oxidase family protein identified by match to protein family HMM PF00724 gene gene1995 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3281 BCG9842_B3282 BCG9842_B3282 BCG9842_B3282 1913903 1914562 + conserved hypothetical protein identified by match to protein family HMM PF01118%3B match to protein family HMM PF01370 gene gene1994 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3282 BCG9842_B3283 BCG9842_B3283 BCG9842_B3283 1913638 1913787 + hypothetical protein identified by glimmer%3B putative gene gene1993 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3283 BCG9842_B3284 BCG9842_B3284 BCG9842_B3284 1912421 1913371 - putative adhesion lipoprotein identified by match to protein family HMM PF01297 gene gene1992 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3284 BCG9842_B3285 BCG9842_B3285 BCG9842_B3285 1911812 1912282 - putative diamine N-acetyltransferase identified by match to protein family HMM PF00583 gene gene1991 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3285 BCG9842_B3286 BCG9842_B3286 BCG9842_B3286 1910749 1911699 + cobalamin synthesis protein/P47K family protein identified by match to protein family HMM PF02492%3B match to protein family HMM PF07683 gene gene1990 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3286 BCG9842_B3287 BCG9842_B3287 BCG9842_B3287 1909681 1910583 - oxidoreductase%2C aldo/keto reductase family identified by match to protein family HMM PF00248 gene gene1989 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3287 BCG9842_B3288 BCG9842_B3288 BCG9842_B3288 1909072 1909656 + acetyltransferase%2C GNAT family identified by match to protein family HMM PF00583 gene gene1988 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3288 BCG9842_B3289 BCG9842_B3289 BCG9842_B3289 1907524 1908987 + amine oxidase%2C flavin-containing identified by match to protein family HMM PF01593 gene gene1987 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3289 BCG9842_B3290 BCG9842_B3290 BCG9842_B3290 1907155 1907346 - hypothetical protein identified by glimmer%3B putative gene gene1986 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3290 BCG9842_B3291 BCG9842_B3291 BCG9842_B3291 1906049 1907050 - bacterial luciferase family protein identified by match to protein family HMM PF00296%3B match to protein family HMM TIGR03558 gene gene1985 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3291 BCG9842_B3292 BCG9842_B3292 BCG9842_B3292 1905060 1906004 + hypothetical protein identified by glimmer%3B putative gene gene1984 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3292 BCG9842_B3293 BCG9842_B3293 BCG9842_B3293 1904390 1904845 + hypothetical protein identified by glimmer%3B putative gene gene1983 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3293 BCG9842_B3294 BCG9842_B3294 dps1 dps1 1903844 1904287 + DNA protection during starvation protein 1 identified by match to protein family HMM PF00210 gene gene1982 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3294 BCG9842_B3295 BCG9842_B3295 BCG9842_B3295 1902562 1903602 - putative membrane protein identified by match to protein family HMM PF03845 gene gene1981 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3295 BCG9842_B3296 BCG9842_B3296 BCG9842_B3296 1902162 1902527 + hypothetical protein identified by glimmer%3B putative gene gene1980 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3296 BCG9842_B3297 BCG9842_B3297 BCG9842_B3297 1901535 1901840 + hypothetical protein identified by glimmer%3B putative gene gene1979 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3297 BCG9842_B3298 BCG9842_B3298 BCG9842_B3298 1899356 1901338 + methyl-accepting chemotaxis protein identified by match to protein family HMM PF00015%3B match to protein family HMM PF00672%3B match to protein family HMM PF02743 gene gene1978 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3298 BCG9842_B3299 BCG9842_B3299 rsgA rsgA 1898106 1899155 + ribosome small subunit-dependent GTPase A identified by match to protein family HMM PF01926%3B match to protein family HMM PF03193%3B match to protein family HMM TIGR00157 gene gene1977 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3299 BCG9842_B3300 BCG9842_B3300 BCG9842_B3300 1897462 1897872 + conserved hypothetical protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts gene gene1976 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3300 BCG9842_B3301 BCG9842_B3301 BCG9842_B3301 1896853 1897200 - conserved hypothetical protein gene gene1975 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3301 BCG9842_B3302 BCG9842_B3302 BCG9842_B3302 1896544 1896777 - conserved hypothetical protein gene gene1974 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3302 BCG9842_B3303 BCG9842_B3303 BCG9842_B3303 1895049 1896224 + putative multidrug resistance protein identified by match to protein family HMM PF07690 gene gene1973 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3303 BCG9842_B3304 BCG9842_B3304 BCG9842_B3304 1894066 1895001 + oxidoreductase%2C aldo/keto reductase family identified by match to protein family HMM PF00248 gene gene1972 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3304 BCG9842_B3305 BCG9842_B3305 BCG9842_B3305 1893651 1893959 - transcriptional regulator%2C ArsR family identified by match to protein family HMM PF01022 gene gene1971 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3305 BCG9842_B3306 BCG9842_B3306 BCG9842_B3306 1892664 1893611 + intracellular serine protease identified by match to protein family HMM PF00082 gene gene1970 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3306 BCG9842_B3307 BCG9842_B3307 BCG9842_B3307 1892101 1892388 + putative transition state transcriptional regulatory protein identified by match to protein family HMM PF04014%3B match to protein family HMM TIGR01439 gene gene1969 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3307 BCG9842_B3308 BCG9842_B3308 BCG9842_B3308 1890105 1891985 + putative membrane protein identified by match to protein family HMM PF02687 gene gene1968 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3308 BCG9842_B3309 BCG9842_B3309 BCG9842_B3309 1889378 1889890 - hypothetical protein identified by glimmer%3B putative gene gene1967 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3309 BCG9842_B3310 BCG9842_B3310 BCG9842_B3310 1887681 1889186 + recombinase family identified by match to protein family HMM PF00239%3B match to protein family HMM PF07508 gene gene1966 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3310 BCG9842_B3311 BCG9842_B3311 BCG9842_B3311 1887367 1887588 + hypothetical protein identified by glimmer%3B putative gene gene1965 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3311 BCG9842_B3312 BCG9842_B3312 BCG9842_B3312 1886829 1887137 - hypothetical protein identified by glimmer%3B putative gene gene1964 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3312 BCG9842_B3313 BCG9842_B3313 BCG9842_B3313 1884998 1886686 + phage major capsid protein%2C HK97 family identified by match to protein family HMM PF04586%3B match to protein family HMM PF05065%3B match to protein family HMM TIGR01543%3B match to protein family HMM TIGR01554 gene gene1963 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3313 BCG9842_B3314 BCG9842_B3314 BCG9842_B3314 1883719 1885020 + phage portal protein%2C HK97 family identified by match to protein family HMM PF04860%3B match to protein family HMM TIGR01537 gene gene1962 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3314 BCG9842_B3315 BCG9842_B3315 BCG9842_B3315 1883438 1883695 + hypothetical protein identified by glimmer%3B putative gene gene1961 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3315 BCG9842_B3316 BCG9842_B3316 BCG9842_B3316 1882894 1883436 + putative terminase small subunit gene gene1960 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3316 BCG9842_B3317 BCG9842_B3317 BCG9842_B3317 1882466 1882762 + peptidase%2C M23/M37 family%2C putative gene gene1959 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3317 BCG9842_B3318 BCG9842_B3318 BCG9842_B3318 1881135 1882124 + hypothetical protein identified by glimmer%3B putative gene gene1958 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3318 BCG9842_B3319 BCG9842_B3319 BCG9842_B3319 1880910 1881089 + hypothetical protein identified by glimmer%3B putative gene gene1957 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3319 BCG9842_B3320 BCG9842_B3320 BCG9842_B3320 1880557 1880760 + conserved hypothetical protein gene gene1956 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3320 BCG9842_B3321 BCG9842_B3321 BCG9842_B3321 1879480 1880403 + hypothetical protein identified by glimmer%3B putative gene gene1955 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3321 BCG9842_B3322 BCG9842_B3322 BCG9842_B3322 1879292 1879435 + hypothetical protein identified by glimmer%3B putative gene gene1954 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3322 BCG9842_B3323 BCG9842_B3323 BCG9842_B3323 1878550 1878828 + hypothetical protein identified by glimmer%3B putative gene gene1953 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3323 BCG9842_B3324 BCG9842_B3324 BCG9842_B3324 1878157 1878474 + hypothetical protein identified by glimmer%3B putative gene gene1952 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3324 BCG9842_B3325 BCG9842_B3325 BCG9842_B3325 1876071 1877963 + hypothetical protein identified by glimmer%3B putative gene gene1951 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3325 BCG9842_B3326 BCG9842_B3326 BCG9842_B3326 1875580 1876074 + hypothetical protein identified by glimmer%3B putative gene gene1950 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3326 BCG9842_B3327 BCG9842_B3327 BCG9842_B3327 1874280 1875587 + hypothetical protein identified by glimmer%3B putative gene gene1949 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3327 BCG9842_B3328 BCG9842_B3328 BCG9842_B3328 1874024 1874203 - hypothetical protein identified by glimmer%3B putative gene gene1948 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3328 BCG9842_B3329 BCG9842_B3329 nadE nadE 1873131 1873949 - NH(3)-dependent NAD(+) synthetase identified by match to protein family HMM PF02540%3B match to protein family HMM TIGR00552 gene gene1947 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3329 BCG9842_B3330 BCG9842_B3330 BCG9842_B3330 1872627 1873088 + mutT/nudix family protein identified by match to protein family HMM PF00293 gene gene1946 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3330 BCG9842_B3331 BCG9842_B3331 BCG9842_B3331 1872467 1872598 + hypothetical protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by glimmer%3B putative gene gene1945 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3331 BCG9842_B3332 BCG9842_B3332 BCG9842_B3332 1871133 1872293 + putative protease gene gene1944 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3332 BCG9842_B3333 BCG9842_B3333 BCG9842_B3333 1870230 1870982 + conserved domain protein identified by match to protein family HMM PF09234 gene gene1943 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3333 BCG9842_B3334 BCG9842_B3334 BCG9842_B3334 1869868 1870011 - conserved hypothetical protein identified by match to protein family HMM PF09680%3B match to protein family HMM TIGR01732 gene gene1942 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3334 BCG9842_B3335 BCG9842_B3335 BCG9842_B3335 1868814 1869779 - phospholipase%2C patatin family identified by match to protein family HMM PF01734 gene gene1941 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3335 BCG9842_B3336 BCG9842_B3336 BCG9842_B3336 1868533 1868700 + conserved hypothetical protein gene gene1940 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3336 BCG9842_B3337 BCG9842_B3337 BCG9842_B3337 1867078 1868520 + transcriptional regulator%2C GntR family identified by match to protein family HMM PF00155%3B match to protein family HMM PF00392 gene gene1939 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3337 BCG9842_B3338 BCG9842_B3338 BCG9842_B3338 1866345 1866962 - lysE/yggA family protein identified by match to protein family HMM PF01810 gene gene1938 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3338 BCG9842_B3339 BCG9842_B3339 BCG9842_B3339 1865062 1866291 + putative multidrug resistance protein identified by match to protein family HMM PF07690 gene gene1937 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3339 BCG9842_B3340 BCG9842_B3340 BCG9842_B3340 1864620 1864826 + Small%2C acid-soluble spore protein%2C alpha/beta family identified by match to protein family HMM PF00269 gene gene1936 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3340 BCG9842_B3341 BCG9842_B3341 asbF asbF 1863653 1864495 + petrobactin biosynthesis protein AsbF identified by match to protein family HMM PF01261 gene gene1935 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3341 BCG9842_B3342 BCG9842_B3342 asbE asbE 1862632 1863615 + petrobactin biosynthesis protein AsbE gene gene1934 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3342 BCG9842_B3343 BCG9842_B3343 asbD asbD 1862333 1862608 + petrobactin biosynthesis aryl carrier protein AsbD an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift gene gene1933 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3343 BCG9842_B3344 BCG9842_B3344 asbC asbC 1861098 1862336 + petrobactin biosynthesis protein AsbC gene gene1932 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3344 BCG9842_B3345 BCG9842_B3345 asbB asbB 1859273 1861111 + petrobactin biosynthesis protein AsbB identified by match to protein family HMM PF04183 gene gene1931 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3345 BCG9842_B3346 BCG9842_B3346 asbA asbA 1857404 1859212 + petrobactin biosynthesis protein AsbA identified by match to protein family HMM PF04183 gene gene1930 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3346 BCG9842_B3347 BCG9842_B3347 BCG9842_B3347 1856550 1857086 + acetyltransferase identified by match to protein family HMM PF00583 gene gene1929 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3347 BCG9842_B3348 BCG9842_B3348 BCG9842_B3348 1855777 1856457 + sapB protein identified by match to protein family HMM PF02308 gene gene1928 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3348 BCG9842_B3349 BCG9842_B3349 BCG9842_B3349 1854961 1855617 + putative lipoprotein gene gene1927 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3349 BCG9842_B3350 BCG9842_B3350 BCG9842_B3350 1854125 1854946 + putative polysaccharide deacetylase identified by match to protein family HMM PF01522 gene gene1926 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3350 BCG9842_B3351 BCG9842_B3351 BCG9842_B3351 1853710 1853823 + hypothetical protein identified by glimmer%3B putative gene gene1925 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3351 BCG9842_B3352 BCG9842_B3352 BCG9842_B3352 1852533 1853540 + transcription antiterminator%2C LytR family identified by match to protein family HMM PF03816%3B match to protein family HMM TIGR00350 gene gene1924 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3352 BCG9842_B3353 BCG9842_B3353 BCG9842_B3353 1849915 1852218 + conserved hypothetical protein gene gene1923 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3353 BCG9842_B3354 BCG9842_B3354 BCG9842_B3354 1849498 1849707 + conserved hypothetical protein gene gene1922 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3354 BCG9842_B3355 BCG9842_B3355 thrB thrB 1848471 1849364 + homoserine kinase identified by match to protein family HMM PF00288%3B match to protein family HMM PF08544%3B match to protein family HMM TIGR00191 gene gene1921 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3355 BCG9842_B3356 BCG9842_B3356 thrC thrC 1847416 1848474 + threonine synthase identified by match to protein family HMM PF00291%3B match to protein family HMM TIGR00260 gene gene1920 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3356 BCG9842_B3357 BCG9842_B3357 hom1 hom1 1846128 1847423 + homoserine dehydrogenase identified by match to protein family HMM PF00742%3B match to protein family HMM PF01842%3B match to protein family HMM PF03447 gene gene1919 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3357 BCG9842_B3358 BCG9842_B3358 BCG9842_B3358 1844522 1845160 + phosphohydrolase identified by match to protein family HMM PF01243 gene gene1918 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3358 BCG9842_B3359 BCG9842_B3359 BCG9842_B3359 1843832 1844440 - mutT/nudix family protein gene gene1917 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3359 BCG9842_B3360 BCG9842_B3360 BCG9842_B3360 1843438 1843779 + conserved hypothetical protein gene gene1916 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3360 BCG9842_B3361 BCG9842_B3361 BCG9842_B3361 1842543 1843370 + putative polysaccharide deacetylase identified by match to protein family HMM PF01522 gene gene1915 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3361 BCG9842_B3362 BCG9842_B3362 BCG9842_B3362 1841555 1842424 + putative aminoglycoside 6-adenylyltransferase identified by match to protein family HMM PF04439 gene gene1914 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3362 BCG9842_B3363 BCG9842_B3363 BCG9842_B3363 1840609 1841028 + O-methyltransferase an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts%3B identified by match to protein family HMM PF01596 gene gene1913 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3363 BCG9842_B3364 BCG9842_B3364 BCG9842_B3364 1839742 1840461 + oxidoreductase%2C short chain dehydrogenase/reductase family identified by match to protein family HMM PF00106%3B match to protein family HMM PF08659 gene gene1912 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3364 BCG9842_B3365 BCG9842_B3365 BCG9842_B3365 1838441 1839514 + sensor histidine kinase identified by match to protein family HMM PF00512%3B match to protein family HMM PF00672%3B match to protein family HMM PF02518 gene gene1911 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3365 BCG9842_B3366 BCG9842_B3366 BCG9842_B3366 1837767 1838444 + DNA-binding response regulator identified by match to protein family HMM PF00072%3B match to protein family HMM PF00486 gene gene1910 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3366 BCG9842_B3367 BCG9842_B3367 BCG9842_B3367 1835966 1837726 + ABC transporter%2C permease/ATP-binding protein identified by match to protein family HMM PF00005%3B match to protein family HMM PF00664 gene gene1909 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3367 BCG9842_B3368 BCG9842_B3368 BCG9842_B3368 1834965 1835729 - hydrolase%2C alpha/beta fold family identified by match to protein family HMM PF00561 gene gene1908 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3368 BCG9842_B3369 BCG9842_B3369 BCG9842_B3369 1833567 1834865 + putative cell wall peptidase%2C NlpC/P60 family identified by match to protein family HMM PF00877%3B match to protein family HMM PF06347%3B match to protein family HMM PF08239 gene gene1907 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3369 BCG9842_B3370 BCG9842_B3370 BCG9842_B3370 1832794 1832964 - conserved hypothetical protein gene gene1906 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3370 BCG9842_B3371 BCG9842_B3371 BCG9842_B3371 1832149 1832751 + conserved hypothetical protein identified by match to protein family HMM PF00881 gene gene1905 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3371 BCG9842_B3372 BCG9842_B3372 BCG9842_B3372 1830949 1831902 + D-alanyl-D-alanine carboxypeptidase family protein identified by match to protein family HMM PF00768 gene gene1904 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3372 BCG9842_B3373 BCG9842_B3373 BCG9842_B3373 1829620 1830621 - microcin C7 self-immunity protein MccF identified by match to protein family HMM PF02016 gene gene1903 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3373 BCG9842_B3374 BCG9842_B3374 BCG9842_B3374 1829135 1829476 - conserved hypothetical protein gene gene1902 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3374 BCG9842_B3375 BCG9842_B3375 BCG9842_B3375 1828804 1829142 - hypothetical Multidrug-Efflux Transporter gene gene1901 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3375 BCG9842_B3376 BCG9842_B3376 BCG9842_B3376 1828322 1828768 + putative lipoprotein gene gene1900 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3376 BCG9842_B3377 BCG9842_B3377 BCG9842_B3377 1828010 1828231 + hypothetical protein identified by glimmer%3B putative gene gene1899 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3377 BCG9842_B3378 BCG9842_B3378 BCG9842_B3378 1827259 1827825 + galactoside O-acetyltransferase identified by match to protein family HMM PF00132 gene gene1898 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3378 BCG9842_B3379 BCG9842_B3379 BCG9842_B3379 1826136 1827266 + degT/dnrJ/eryC1/strS family protein identified by match to protein family HMM PF01041 gene gene1897 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3379 BCG9842_B3380 BCG9842_B3380 BCG9842_B3380 1823555 1826116 + glycosyl transferase%2C group 2 family protein identified by match to protein family HMM PF00535%3B match to protein family HMM PF08241 gene gene1896 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3380 BCG9842_B3381 BCG9842_B3381 BCG9842_B3381 1822299 1823447 + conserved hypothetical protein gene gene1895 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3381 BCG9842_B3382 BCG9842_B3382 BCG9842_B3382 1820442 1822166 + ABC transporter%2C CydDC cysteine exporter (CydDC-E) family%2C permease/ATP-binding protein CydC identified by match to protein family HMM PF00005%3B match to protein family HMM PF00664%3B match to protein family HMM TIGR02868 gene gene1894 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3382 BCG9842_B3383 BCG9842_B3383 BCG9842_B3383 1818724 1820445 + transport ATP-binding protein CydC identified by match to protein family HMM PF00005%3B match to protein family HMM PF00664%3B match to protein family HMM TIGR02857 gene gene1893 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3383 BCG9842_B3384 BCG9842_B3384 cydB1 cydB1 1817708 1818724 + cytochrome d ubiquinol oxidase%2C subunit II identified by match to protein family HMM PF02322%3B match to protein family HMM TIGR00203 gene gene1892 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3384 BCG9842_B3385 BCG9842_B3385 cydA1 cydA1 1816318 1817721 + cytochrome d ubiquinol oxidase%2C subunit I identified by match to protein family HMM PF01654 gene gene1891 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3385 BCG9842_B3386 BCG9842_B3386 BCG9842_B3386 1815945 1816088 + conserved hypothetical protein gene gene1890 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3386 BCG9842_B3387 BCG9842_B3387 BCG9842_B3387 1814671 1815726 + bacterial luciferase family protein identified by match to protein family HMM PF00296 gene gene1889 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3387 BCG9842_B3388 BCG9842_B3388 BCG9842_B3388 1814107 1814550 + transcriptional regulator%2C MarR family identified by match to protein family HMM PF01047%3B match to protein family HMM PF03551 gene gene1888 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3388 BCG9842_B3389 BCG9842_B3389 BCG9842_B3389 1812246 1813238 + hypothetical protein identified by glimmer%3B putative gene gene1887 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3389 BCG9842_B3390 BCG9842_B3390 BCG9842_B3390 1811730 1812236 + protein of unknown function identified by match to protein family HMM PF01947 gene gene1886 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3390 BCG9842_B3391 BCG9842_B3391 BCG9842_B3391 1810076 1811716 + nodulation protein nolNO identified by match to protein family HMM PF02543 gene gene1885 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3391 BCG9842_B3392 BCG9842_B3392 BCG9842_B3392 1809134 1810045 + glycosyl transferase%2C family 2 identified by match to protein family HMM PF00535 gene gene1884 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3392 BCG9842_B3393 BCG9842_B3393 BCG9842_B3393 1808328 1809113 + conserved membrane protein%2C putative multidrug efflux associated identified by match to protein family HMM PF06182 gene gene1883 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3393 BCG9842_B3394 BCG9842_B3394 BCG9842_B3394 1807514 1808326 + protein of unknown function%2C putative identified by match to protein family HMM PF06182 gene gene1882 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3394 BCG9842_B3395 BCG9842_B3395 BCG9842_B3395 1806493 1807509 + ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005 gene gene1881 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3395 BCG9842_B3396 BCG9842_B3396 BCG9842_B3396 1806200 1806481 + conserved domain protein gene gene1880 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3396 BCG9842_B3397 BCG9842_B3397 BCG9842_B3397 1804694 1806157 + putative acyl-CoA synthetase identified by match to protein family HMM PF00501 gene gene1879 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3397 BCG9842_B3398 BCG9842_B3398 BCG9842_B3398 1804030 1804683 + phosphoglycolate phosphatase%2C putative identified by match to protein family HMM PF00702%3B match to protein family HMM TIGR01509%3B match to protein family HMM TIGR01549 gene gene1878 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3398 BCG9842_B3399 BCG9842_B3399 BCG9842_B3399 1802933 1804030 + nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase identified by match to protein family HMM PF02277 gene gene1877 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3399 BCG9842_B3400 BCG9842_B3400 BCG9842_B3400 1801665 1802936 + glycosyl transferase%2C group 1 family protein identified by match to protein family HMM PF00534 gene gene1876 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3400 BCG9842_B3401 BCG9842_B3401 rfbG_2 rfbG_2 1800568 1801668 + CDP-glucose 4%2C6-dehydratase identified by match to protein family HMM PF01073%3B match to protein family HMM PF01370%3B match to protein family HMM PF02719%3B match to protein family HMM PF07993%3B match to protein family HMM TIGR02622 gene gene1875 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3401 BCG9842_B3402 BCG9842_B3402 rfbF rfbF 1799801 1800586 + glucose-1-phosphate cytidylyltransferase identified by match to protein family HMM PF00483%3B match to protein family HMM TIGR02623 gene gene1874 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3402 BCG9842_B3403 BCG9842_B3403 BCG9842_B3403 1799475 1799657 + hypothetical protein identified by glimmer%3B putative gene gene1873 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3403 BCG9842_B3404 BCG9842_B3404 BCG9842_B3404 1798413 1799171 - protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin%2C putative identified by match to protein family HMM PF05721 gene gene1872 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3404 BCG9842_B3405 BCG9842_B3405 BCG9842_B3405 1797392 1797895 + conserved hypothetical protein gene gene1871 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3405 BCG9842_B3406 BCG9842_B3406 BCG9842_B3406 1796438 1797226 - transcriptional regulator%2C LysR family identified by match to protein family HMM PF00126 gene gene1870 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3406 BCG9842_B3407 BCG9842_B3407 BCG9842_B3407 1795448 1796344 + branched-chain amino acid ABC transporter%2C permease protein identified by match to protein family HMM PF02653 gene gene1869 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3407 BCG9842_B3408 BCG9842_B3408 BCG9842_B3408 1794481 1795341 + branched-chain amino acid ABC transporter%2C permease protein identified by match to protein family HMM PF02653 gene gene1868 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3408 BCG9842_B3409 BCG9842_B3409 BCG9842_B3409 1793758 1794459 + branched-chain amino acid ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005 gene gene1867 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3409 BCG9842_B3410 BCG9842_B3410 BCG9842_B3410 1793007 1793780 + branched-chain amino acid ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005 gene gene1866 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3410 BCG9842_B3411 BCG9842_B3411 BCG9842_B3411 1791699 1792916 + putative branched-chain amino acid ABC transporter%2C branched chain amino acid-binding protein identified by match to protein family HMM PF01094 gene gene1865 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3411 BCG9842_B3412 BCG9842_B3412 BCG9842_B3412 1790513 1791436 + cobalamin synthesis protein/P47K family protein identified by match to protein family HMM PF02492%3B match to protein family HMM PF07683 gene gene1864 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3412 BCG9842_B3413 BCG9842_B3413 BCG9842_B3413 1790396 1790512 + hypothetical protein identified by glimmer%3B putative gene gene1863 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3413 BCG9842_B3414 BCG9842_B3414 BCG9842_B3414 1788970 1790406 + amine oxidase%2C flavin-containing identified by match to protein family HMM PF01593 gene gene1862 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3414 BCG9842_B3415 BCG9842_B3415 ldh1 ldh1 1787825 1788769 - L-lactate dehydrogenase identified by match to protein family HMM PF00056%3B match to protein family HMM PF02866%3B match to protein family HMM TIGR01771 gene gene1861 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3415 BCG9842_B3416 BCG9842_B3416 BCG9842_B3416 1786723 1787736 + putative membrane protein identified by match to protein family HMM PF01594 gene gene1860 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3416 BCG9842_B3417 BCG9842_B3417 BCG9842_B3417 1786550 1786663 + hypothetical protein identified by glimmer%3B putative gene gene1859 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3417 BCG9842_B3418 BCG9842_B3418 BCG9842_B3418 1784930 1786540 + amidase family protein identified by match to protein family HMM PF01425 gene gene1858 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3418 BCG9842_B3419 BCG9842_B3419 BCG9842_B3419 1784688 1784822 + conserved hypothetical protein gene gene1857 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3419 BCG9842_B3420 BCG9842_B3420 BCG9842_B3420 1783959 1784561 + conserved hypothetical protein identified by match to protein family HMM PF00881 gene gene1856 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3420 BCG9842_B3421 BCG9842_B3421 BCG9842_B3421 1783251 1783901 + 2-hydroxychromene-2-carboxylate isomerase family protein identified by match to protein family HMM PF01323 gene gene1855 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3421 BCG9842_B3422 BCG9842_B3422 BCG9842_B3422 1782748 1783179 + rrf2 family protein identified by match to protein family HMM PF02082 gene gene1854 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3422 BCG9842_B3423 BCG9842_B3423 BCG9842_B3423 1781758 1782627 + transcriptional regulator%2C LysR family identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466 gene gene1853 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3423 BCG9842_B3424 BCG9842_B3424 BCG9842_B3424 1780755 1781660 - transporter%2C Drug/Metabolite Exporter family identified by match to protein family HMM PF00892 gene gene1852 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3424 BCG9842_B3425 BCG9842_B3425 BCG9842_B3425 1780092 1780712 + conserved hypothetical protein identified by match to protein family HMM PF07987 gene gene1851 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3425 BCG9842_B3426 BCG9842_B3426 BCG9842_B3426 1778414 1780057 + putative membrane protein identified by match to protein family HMM PF04234%3B match to protein family HMM PF05425 gene gene1850 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3426 BCG9842_B3427 BCG9842_B3427 BCG9842_B3427 1778132 1778296 + conserved hypothetical protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift gene gene1849 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3427 BCG9842_B3428 BCG9842_B3428 BCG9842_B3428 1777659 1778078 + glyoxalase family protein identified by match to protein family HMM PF00903 gene gene1848 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3428 BCG9842_B3429 BCG9842_B3429 BCG9842_B3429 1776217 1777575 + branched-chain amino acid transport system II carrier protein identified by match to protein family HMM PF05525%3B match to protein family HMM TIGR00796 gene gene1847 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3429 BCG9842_B3430 BCG9842_B3430 BCG9842_B3430 1775286 1775978 + conserved hypothetical protein identified by match to protein family HMM PF02525 gene gene1846 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3430 BCG9842_B3431 BCG9842_B3431 BCG9842_B3431 1774027 1774992 - sodium/bile acid symporter family protein identified by match to protein family HMM PF01758 gene gene1845 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3431 BCG9842_B3432 BCG9842_B3432 BCG9842_B3432 1772575 1773822 + putative membrane protein gene gene1844 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3432 BCG9842_B3433 BCG9842_B3433 topB2 topB2 1770231 1772375 + DNA topoisomerase III identified by match to protein family HMM PF01131%3B match to protein family HMM PF01396%3B match to protein family HMM PF01751%3B match to protein family HMM TIGR01056 gene gene1843 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3433 BCG9842_B3434 BCG9842_B3434 BCG9842_B3434 1769358 1769897 - conserved hypothetical protein gene gene1842 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3434 BCG9842_B3435 BCG9842_B3435 BCG9842_B3435 1767666 1769306 + multicopper oxidase family protein identified by match to protein family HMM PF00394%3B match to protein family HMM PF07731%3B match to protein family HMM PF07732 gene gene1841 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3435 BCG9842_B3436 BCG9842_B3436 BCG9842_B3436 1766674 1767309 - conserved hypothetical protein identified by match to protein family HMM PF00805 gene gene1840 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3436 BCG9842_B3437 BCG9842_B3437 BCG9842_B3437 1765295 1766578 + Xaa-Pro aminopeptidase identified by match to protein family HMM PF00557%3B match to protein family HMM PF05195 gene gene1839 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3437 BCG9842_B3438 BCG9842_B3438 BCG9842_B3438 1764875 1765105 - conserved hypothetical protein identified by match to protein family HMM PF05979 gene gene1838 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3438 BCG9842_B3439 BCG9842_B3439 BCG9842_B3439 1764348 1764827 + CcdC protein identified by match to protein family HMM PF07301 gene gene1837 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3439 BCG9842_B3440 BCG9842_B3440 BCG9842_B3440 1763937 1764332 + conserved hypothetical protein gene gene1836 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3440 BCG9842_B3441 BCG9842_B3441 BCG9842_B3441 1763689 1763856 + transposase gene gene1835 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3441 BCG9842_B3442 BCG9842_B3442 BCG9842_B3442 1762814 1763428 + conserved hypothetical protein gene gene1834 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3442 BCG9842_B3443 BCG9842_B3443 BCG9842_B3443 1761211 1762830 + conserved hypothetical protein gene gene1833 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3443 BCG9842_B3444 BCG9842_B3444 BCG9842_B3444 1760852 1760989 + conserved hypothetical protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a premature stop gene gene1832 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3444 BCG9842_B3445 BCG9842_B3445 BCG9842_B3445 1760535 1760810 + conserved hypothetical protein gene gene1831 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3445 BCG9842_B3446 BCG9842_B3446 BCG9842_B3446 1759558 1760412 + transposase in Marinococcus halophilus identified by match to protein family HMM PF00665 gene gene1830 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3446 BCG9842_B3447 BCG9842_B3447 BCG9842_B3447 1759256 1759561 + transposase in Marinococcus halophilus gene gene1829 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3447 BCG9842_B3448 BCG9842_B3448 cdd1 cdd1 1758496 1758891 + cytidine deaminase identified by match to protein family HMM PF00383%3B match to protein family HMM TIGR01354 gene gene1828 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3448 BCG9842_B3449 BCG9842_B3449 pyn1 pyn1 1757161 1758462 + pyrimidine-nucleoside phosphorylase identified by match to protein family HMM PF00591%3B match to protein family HMM PF02885%3B match to protein family HMM PF07831%3B match to protein family HMM TIGR02644 gene gene1827 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3449 BCG9842_B3450 BCG9842_B3450 BCG9842_B3450 1755943 1757124 + nucleoside transporter NupC identified by match to protein family HMM PF01773%3B match to protein family HMM PF07662%3B match to protein family HMM PF07670%3B match to protein family HMM TIGR00804 gene gene1826 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3450 BCG9842_B3451 BCG9842_B3451 deoC deoC 1755173 1755844 + deoxyribose-phosphate aldolase identified by match to protein family HMM PF01791%3B match to protein family HMM TIGR00126 gene gene1825 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3451 BCG9842_B3452 BCG9842_B3452 BCG9842_B3452 1753919 1754866 + putative deoxyribonucleoside regulator DeoR identified by match to protein family HMM PF04198 gene gene1824 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3452 BCG9842_B3453 BCG9842_B3453 BCG9842_B3453 1753065 1753655 + transcriptional regulator%2C TetR family identified by match to protein family HMM PF00440 gene gene1823 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3453 BCG9842_B3454 BCG9842_B3454 BCG9842_B3454 1751772 1752425 - CAAX amino terminal protease family protein identified by match to protein family HMM PF02517 gene gene1822 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3454 BCG9842_B3455 BCG9842_B3455 BCG9842_B3455 1751369 1751680 - conserved hypothetical protein identified by match to protein family HMM PF01906 gene gene1821 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3455 BCG9842_B3456 BCG9842_B3456 BCG9842_B3456 1750440 1751063 + acetyltransferase identified by match to protein family HMM PF00583 gene gene1820 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3456 BCG9842_B3457 BCG9842_B3457 BCG9842_B3457 1749793 1750377 + transcriptional regulator%2C TetR family identified by match to protein family HMM PF00440 gene gene1819 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3457 BCG9842_B3458 BCG9842_B3458 BCG9842_B3458 1749510 1749644 - hypothetical protein identified by glimmer%3B putative gene gene1818 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3458 BCG9842_B3459 BCG9842_B3459 BCG9842_B3459 1748017 1749387 + carboxylic ester hydrolase identified by match to protein family HMM PF03403 gene gene1817 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3459 BCG9842_B3460 BCG9842_B3460 BCG9842_B3460 1746599 1747870 + aminopeptidase 2 identified by match to protein family HMM PF02073 gene gene1816 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3460 BCG9842_B3461 BCG9842_B3461 BCG9842_B3461 1744938 1746017 + enterotoxin C identified by match to protein family HMM PF05791 gene gene1815 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3461 BCG9842_B3462 BCG9842_B3462 BCG9842_B3462 1743622 1744830 + enterotoxin B identified by match to protein family HMM PF05791 gene gene1814 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3462 BCG9842_B3463 BCG9842_B3463 BCG9842_B3463 1742424 1743584 + enterotoxin A identified by match to protein family HMM PF05791 gene gene1813 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3463 BCG9842_B3464 BCG9842_B3464 BCG9842_B3464 1739999 1741825 + putative membrane protein gene gene1812 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3464 BCG9842_B3466 BCG9842_B3466 BCG9842_B3466 1739439 1739567 - conserved hypothetical protein gene gene1811 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3466 BCG9842_B3467 BCG9842_B3467 panE1 panE1 1738430 1739374 + 2-dehydropantoate 2-reductase identified by match to protein family HMM PF02558%3B match to protein family HMM PF08546%3B match to protein family HMM TIGR00745 gene gene1810 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3467 BCG9842_B3468 BCG9842_B3468 BCG9842_B3468 1736779 1738254 - hypothetical protein identified by glimmer%3B putative gene gene1809 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3468 BCG9842_B3469 BCG9842_B3469 BCG9842_B3469 1735662 1736621 + rhodanese-like domain protein identified by match to protein family HMM PF00581 gene gene1808 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3469 BCG9842_B3470 BCG9842_B3470 BCG9842_B3470 1733887 1735182 - transport protein%2C NRAMP family identified by match to protein family HMM PF01566%3B match to protein family HMM TIGR01197 gene gene1807 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3470 BCG9842_B3471 BCG9842_B3471 BCG9842_B3471 1733122 1733826 + peptidase%2C M23/M37 family identified by match to protein family HMM PF01551 gene gene1806 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3471 BCG9842_B3472 BCG9842_B3472 BCG9842_B3472 1731881 1732894 + sensor protein VanS identified by match to protein family HMM PF00512%3B match to protein family HMM PF00672%3B match to protein family HMM PF02518 gene gene1805 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3472 BCG9842_B3473 BCG9842_B3473 BCG9842_B3473 1731130 1731828 + DNA-binding response regulator identified by match to protein family HMM PF00072%3B match to protein family HMM PF00486 gene gene1804 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3473 BCG9842_B3474 BCG9842_B3474 BCG9842_B3474 1730457 1730987 - acetyltransferase%2C GNAT family identified by match to protein family HMM PF00583 gene gene1803 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3474 BCG9842_B3475 BCG9842_B3475 BCG9842_B3475 1728777 1730405 + putative oligopeptide ABC transporter%2C oligopeptide-binding protein identified by match to protein family HMM PF00496 gene gene1802 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3475 BCG9842_B3476 BCG9842_B3476 BCG9842_B3476 1727314 1728621 + chlorohydrolase family protein identified by match to protein family HMM PF01979%3B match to protein family HMM PF07969 gene gene1801 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3476 BCG9842_B3477 BCG9842_B3477 BCG9842_B3477 1727122 1727241 + conserved hypothetical protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a premature stop gene gene1800 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3477 BCG9842_B3478 BCG9842_B3478 BCG9842_B3478 1726411 1726704 + acetyltransferase%2C GNAT family an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a premature stop gene gene1799 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3478 BCG9842_B3479 BCG9842_B3479 BCG9842_B3479 1724659 1726173 + acetyl-CoA hydrolase/transferase family protein identified by match to protein family HMM PF02550%3B match to protein family HMM TIGR03458 gene gene1798 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3479 BCG9842_B3480 BCG9842_B3480 BCG9842_B3480 1723887 1724531 + putative methyl-accepting/DNA response regulator identified by match to protein family HMM PF04397 gene gene1797 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3480 BCG9842_B3481 BCG9842_B3481 BCG9842_B3481 1722771 1723694 + hydrolase%2C alpha/beta fold family identified by match to protein family HMM PF00561 gene gene1796 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3481 BCG9842_B3482 BCG9842_B3482 BCG9842_B3482 1721804 1722565 - oxidoreductase identified by match to protein family HMM PF02900 gene gene1795 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3482 BCG9842_B3483 BCG9842_B3483 BCG9842_B3483 1720537 1721751 + major facilitator family transporter identified by match to protein family HMM PF00083%3B match to protein family HMM PF07690 gene gene1794 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3483 BCG9842_B3484 BCG9842_B3484 BCG9842_B3484 1719518 1720369 + acetyltransferase%2C GNAT family identified by match to protein family HMM PF00583 gene gene1793 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3484 BCG9842_B3485 BCG9842_B3485 BCG9842_B3485 1718783 1719499 + putative membrane protein identified by match to protein family HMM PF04474 gene gene1792 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3485 BCG9842_B3486 BCG9842_B3486 BCG9842_B3486 1717461 1718564 - conserved hypothetical protein identified by match to protein family HMM PF09587 gene gene1791 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3486 BCG9842_B3487 BCG9842_B3487 ilvA ilvA 1715828 1717090 + threonine ammonia-lyase%2C biosynthetic identified by match to protein family HMM PF00291%3B match to protein family HMM PF00585%3B match to protein family HMM TIGR02079 gene gene1790 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3487 BCG9842_B3488 BCG9842_B3488 ilvD ilvD 1714123 1715796 + dihydroxy-acid dehydratase identified by match to protein family HMM PF00920%3B match to protein family HMM TIGR00110 gene gene1789 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3488 BCG9842_B3489 BCG9842_B3489 ilvC2 ilvC2 1713069 1714076 + ketol-acid reductoisomerase identified by match to protein family HMM PF01450%3B match to protein family HMM PF07991%3B match to protein family HMM TIGR00465 gene gene1788 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3489 BCG9842_B3490 BCG9842_B3490 BCG9842_B3490 1712824 1713054 + conserved domain protein identified by match to protein family HMM PF01842%3B match to protein family HMM TIGR00119 gene gene1787 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3490 BCG9842_B3491 BCG9842_B3491 ilvB2 ilvB2 1711112 1712827 + acetolactate synthase%2C large subunit%2C biosynthetic type identified by match to protein family HMM PF00205%3B match to protein family HMM PF02775%3B match to protein family HMM PF02776%3B match to protein family HMM TIGR00118 gene gene1786 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3491 BCG9842_B3492 BCG9842_B3492 ilvE2 ilvE2 1710190 1711089 + branched-chain amino acid aminotransferase identified by match to protein family HMM PF01063%3B match to protein family HMM TIGR01122 gene gene1785 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3492 BCG9842_B3493 BCG9842_B3493 BCG9842_B3493 1708503 1709261 - oxidoreductase%2C short-chain dehydrogenase/reductase family identified by match to protein family HMM PF00106 gene gene1784 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3493 BCG9842_B3494 BCG9842_B3494 msrA1 msrA1 1707876 1708412 - peptide methionine sulfoxide reductase identified by match to protein family HMM PF01625%3B match to protein family HMM TIGR00401 gene gene1783 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3494 BCG9842_B3495 BCG9842_B3495 BCG9842_B3495 1707723 1707839 + hypothetical protein identified by glimmer%3B putative gene gene1782 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3495 BCG9842_B3496 BCG9842_B3496 BCG9842_B3496 1707512 1707712 + conserved hypothetical protein gene gene1781 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3496 BCG9842_B3497 BCG9842_B3497 BCG9842_B3497 1706401 1707288 + beta-lactamase inhibitory protein II gene gene1780 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3497 BCG9842_B3498 BCG9842_B3498 BCG9842_B3498 1705617 1706258 + fibronectin-binding protein identified by match to protein family HMM PF07299 gene gene1779 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3498 BCG9842_B3499 BCG9842_B3499 BCG9842_B3499 1704820 1705506 + conserved hypothetical protein identified by match to protein family HMM PF04239 gene gene1778 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3499 BCG9842_B3500 BCG9842_B3500 BCG9842_B3500 1704402 1704665 + conserved hypothetical protein gene gene1777 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3500 BCG9842_B3501 BCG9842_B3501 BCG9842_B3501 1703373 1704077 - putative polysaccharide deacetylase identified by match to protein family HMM PF01522 gene gene1776 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3501 BCG9842_B3502 BCG9842_B3502 BCG9842_B3502 1701992 1703329 + sodium-dependent transporter identified by match to protein family HMM PF00209 gene gene1775 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3502 BCG9842_B3503 BCG9842_B3503 BCG9842_B3503 1700654 1701229 + conserved hypothetical protein gene gene1774 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3503 BCG9842_B3504 BCG9842_B3504 BCG9842_B3504 1699803 1700630 + hypothetical Cytosolic Protein gene gene1773 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3504 BCG9842_B3505 BCG9842_B3505 BCG9842_B3505 1699197 1699709 + acetyltransferase%2C GNAT family identified by match to protein family HMM PF00583 gene gene1772 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3505 BCG9842_B3506 BCG9842_B3506 cysK2 cysK2 1698200 1699117 + cysteine synthase A identified by match to protein family HMM PF00291%3B match to protein family HMM TIGR01136%3B match to protein family HMM TIGR01139 gene gene1771 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3506 BCG9842_B3507 BCG9842_B3507 fsR fsR 1696978 1698189 + fosmidomycin resistance protein identified by match to protein family HMM PF07690 gene gene1770 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3507 BCG9842_B3508 BCG9842_B3508 BCG9842_B3508 1695507 1696766 + GTP-binding protein identified by match to protein family HMM PF01926%3B match to protein family HMM TIGR03156 gene gene1769 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3508 BCG9842_B3509 BCG9842_B3509 BCG9842_B3509 1693837 1694820 - putative 3-oxoacyl-(acyl-carrier-protein) synthase III identified by match to protein family HMM PF08541%3B match to protein family HMM PF08545%3B match to protein family HMM TIGR00747 gene gene1768 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3509 BCG9842_B3510 BCG9842_B3510 BCG9842_B3510 1692516 1693790 + putative multidrug resistance protein identified by match to protein family HMM PF07690 gene gene1767 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3510 BCG9842_B3511 BCG9842_B3511 BCG9842_B3511 1690559 1692307 + multidrug resistance protein B identified by match to protein family HMM PF07690%3B match to protein family HMM TIGR00711 gene gene1766 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3511 BCG9842_B3512 BCG9842_B3512 BCG9842_B3512 1689983 1690522 + transcriptional repressor PadR identified by match to protein family HMM PF03551 gene gene1765 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3512 BCG9842_B3513 BCG9842_B3513 BCG9842_B3513 1689027 1689830 + UDP-galactose-lipid carrier transferase identified by match to protein family HMM PF03976 gene gene1764 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3513 BCG9842_B3514 BCG9842_B3514 BCG9842_B3514 1688159 1688623 - conserved domain protein gene gene1763 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3514 BCG9842_B3515 BCG9842_B3515 BCG9842_B3515 1686682 1687944 + putative transporter identified by match to protein family HMM PF07690 gene gene1762 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3515 BCG9842_B3516 BCG9842_B3516 BCG9842_B3516 1686059 1686496 - phosphohydrolase identified by match to protein family HMM PF00293 gene gene1761 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3516 BCG9842_B3517 BCG9842_B3517 BCG9842_B3517 1684404 1686023 + putative membrane protein gene gene1760 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3517 BCG9842_B3518 BCG9842_B3518 BCG9842_B3518 1683787 1684398 + conserved hypothetical protein gene gene1759 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3518 BCG9842_B3519 BCG9842_B3519 BCG9842_B3519 1682874 1683782 + conserved hypothetical protein gene gene1758 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3519 BCG9842_B3521 BCG9842_B3521 dapG1 dapG1 1681064 1682293 - aspartate kinase%2C monofunctional class identified by match to protein family HMM PF00696%3B match to protein family HMM PF01842%3B match to protein family HMM TIGR00656%3B match to protein family HMM TIGR00657 gene gene1757 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3521 BCG9842_B3522 BCG9842_B3522 BCG9842_B3522 1680385 1680837 - conserved hypothetical protein identified by match to protein family HMM PF00903 gene gene1756 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3522 BCG9842_B3523 BCG9842_B3523 asnA asnA 1679339 1680322 + aspartate--ammonia ligase identified by match to protein family HMM PF03590%3B match to protein family HMM TIGR00669 gene gene1755 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3523 BCG9842_B3524 BCG9842_B3524 BCG9842_B3524 1678762 1678878 + conserved hypothetical protein gene gene1754 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3524 BCG9842_B3525 BCG9842_B3525 BCG9842_B3525 1678469 1678603 - conserved hypothetical protein gene gene1753 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3525 BCG9842_B3526 BCG9842_B3526 BCG9842_B3526 1675173 1678367 + putative helicase identified by match to protein family HMM PF00176%3B match to protein family HMM PF00271%3B match to protein family HMM PF04434%3B match to protein family HMM PF08455 gene gene1752 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3526 BCG9842_B3527 BCG9842_B3527 BCG9842_B3527 1674123 1675055 + response regulator identified by match to protein family HMM PF00072%3B match to protein family HMM PF08664 gene gene1751 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3527 BCG9842_B3528 BCG9842_B3528 BCG9842_B3528 1672831 1674120 + sensor histidine kinase identified by match to protein family HMM PF02518 gene gene1750 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3528 BCG9842_B3529 BCG9842_B3529 malS malS 1671046 1672758 + malate oxidoreductase (oxaloacetate-decarboxylating) identified by match to protein family HMM PF00390%3B match to protein family HMM PF03949 gene gene1749 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3529 BCG9842_B3530 BCG9842_B3530 aspA2 aspA2 1669531 1670970 + aspartate ammonia-lyase identified by match to protein family HMM PF00206%3B match to protein family HMM TIGR00839 gene gene1748 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3530 BCG9842_B3531 BCG9842_B3531 BCG9842_B3531 1668235 1669506 + proton/sodium-glutamate symporter identified by match to protein family HMM PF00375 gene gene1747 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3531 BCG9842_B3532 BCG9842_B3532 pyrH1 pyrH1 1667115 1667858 - uridylate kinase identified by match to protein family HMM PF00696%3B match to protein family HMM TIGR02075 gene gene1746 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3532 BCG9842_B3533 BCG9842_B3533 BCG9842_B3533 1665798 1667060 + cardiolipin synthetase domain protein identified by match to protein family HMM PF00614 gene gene1745 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3533 BCG9842_B3534 BCG9842_B3534 BCG9842_B3534 1664593 1665738 + putative membrane protein identified by match to protein family HMM PF01061 gene gene1744 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3534 BCG9842_B3535 BCG9842_B3535 BCG9842_B3535 1663482 1664591 + ABC transporter%2C permease protein identified by match to protein family HMM PF01061 gene gene1743 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3535 BCG9842_B3536 BCG9842_B3536 BCG9842_B3536 1662506 1663444 + ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005 gene gene1742 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3536 BCG9842_B3537 BCG9842_B3537 BCG9842_B3537 1661371 1662369 + sensory Transduction Protein Kinase identified by match to protein family HMM PF02518%3B match to protein family HMM PF07730 gene gene1741 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3537 BCG9842_B3538 BCG9842_B3538 BCG9842_B3538 1660593 1661264 + DNA-binding response regulator%2C LuxR family identified by match to protein family HMM PF00072%3B match to protein family HMM PF00196 gene gene1740 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3538 BCG9842_B3539 BCG9842_B3539 BCG9842_B3539 1660511 1660627 - hypothetical protein identified by glimmer%3B putative gene gene1739 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3539 BCG9842_B3540 BCG9842_B3540 BCG9842_B3540 1659860 1660342 - RNA polymerase sigma-70 factor%2C ECF subfamily identified by match to protein family HMM PF04542%3B match to protein family HMM PF04545%3B match to protein family HMM PF08281%3B match to protein family HMM TIGR02937 gene gene1738 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3540 BCG9842_B3541 BCG9842_B3541 BCG9842_B3541 1659420 1659863 - hypothetical protein identified by glimmer%3B putative gene gene1737 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3541 BCG9842_B3542 BCG9842_B3542 BCG9842_B3542 1658357 1659427 - putative membrane protein gene gene1736 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3542 BCG9842_B3543 BCG9842_B3543 BCG9842_B3543 1657404 1658360 - putative lipoprotein gene gene1735 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3543 BCG9842_B3544 BCG9842_B3544 BCG9842_B3544 1656124 1657371 + conserved hypothetical protein identified by match to protein family HMM PF04286 gene gene1734 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3544 BCG9842_B3545 BCG9842_B3545 dsdA dsdA 1654638 1655969 + D-serine ammonia-lyase identified by match to protein family HMM PF00291%3B match to protein family HMM TIGR02035 gene gene1733 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3545 BCG9842_B3546 BCG9842_B3546 BCG9842_B3546 1653942 1654487 - DNA-binding protein identified by match to protein family HMM PF01381%3B match to protein family HMM PF07883 gene gene1732 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3546 BCG9842_B3547 BCG9842_B3547 BCG9842_B3547 1653726 1653902 + hypothetical protein identified by glimmer%3B putative gene gene1731 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3547 BCG9842_B3548 BCG9842_B3548 BCG9842_B3548 1652488 1653582 - tetratricopeptide domain protein gene gene1730 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3548 BCG9842_B3549 BCG9842_B3549 BCG9842_B3549 1652351 1652488 - hypothetical protein identified by glimmer%3B putative gene gene1729 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3549 BCG9842_B3550 BCG9842_B3550 BCG9842_B3550 1651547 1652227 + prolipoprotein diacylglyceryl transferase family protein gene gene1728 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3550 BCG9842_B3551 BCG9842_B3551 BCG9842_B3551 1650975 1651529 + thioredoxin family protein identified by match to protein family HMM PF00085%3B match to protein family HMM PF00578%3B match to protein family HMM PF08534 gene gene1727 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3551 BCG9842_B3552 BCG9842_B3552 ccdA1 ccdA1 1650243 1650956 + cytochrome c-type biogenesis protein CcdA identified by match to protein family HMM PF02683 gene gene1726 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3552 BCG9842_B3553 BCG9842_B3553 BCG9842_B3553 1649376 1650188 + conserved domain protein identified by match to protein family HMM PF01435%3B match to protein family HMM PF05569 gene gene1725 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3553 BCG9842_B3554 BCG9842_B3554 BCG9842_B3554 1648958 1649371 + conserved hypothetical protein identified by match to protein family HMM PF03965 gene gene1724 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3554 BCG9842_B3555 BCG9842_B3555 BCG9842_B3555 1648452 1648847 + hypothetical protein identified by glimmer%3B putative gene gene1723 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3555 BCG9842_B3556 BCG9842_B3556 BCG9842_B3556 1647361 1648059 - conserved hypothetical protein identified by match to protein family HMM PF03575 gene gene1722 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3556 BCG9842_B3557 BCG9842_B3557 BCG9842_B3557 1645894 1647303 + putative MATE efflux protein identified by match to protein family HMM PF01554%3B match to protein family HMM TIGR00797 gene gene1721 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3557 BCG9842_B3558 BCG9842_B3558 BCG9842_B3558 1645032 1645796 + conserved hypothetical protein gene gene1720 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3558 BCG9842_B3559 BCG9842_B3559 BCG9842_B3559 1644419 1644541 + conserved hypothetical protein gene gene1719 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3559 BCG9842_B3560 BCG9842_B3560 BCG9842_B3560 1643788 1644210 - hypothetical protein identified by glimmer%3B putative gene gene1718 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3560 BCG9842_B3561 BCG9842_B3561 fumC fumC 1642304 1643692 + fumarate hydratase%2C class II identified by match to protein family HMM PF00206%3B match to protein family HMM TIGR00979 gene gene1717 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3561 BCG9842_B3562 BCG9842_B3562 BCG9842_B3562 1641402 1642112 - short chain dehydrogenase identified by match to protein family HMM PF00106 gene gene1716 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3562 BCG9842_B3563 BCG9842_B3563 BCG9842_B3563 1641005 1641385 - transcriptional regulator%2C MerR family identified by match to protein family HMM PF00376 gene gene1715 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3563 BCG9842_B3564 BCG9842_B3564 nhaC2 nhaC2 1639562 1640965 + Na+/H+ antiporter NhaC identified by match to protein family HMM PF03553%3B match to protein family HMM PF03600%3B match to protein family HMM TIGR00931 gene gene1714 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3564 BCG9842_B3565 BCG9842_B3565 BCG9842_B3565 1638439 1639098 + conserved domain protein gene gene1713 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3565 BCG9842_B3566 BCG9842_B3566 BCG9842_B3566 1637442 1638326 + conserved hypothetical protein identified by match to protein family HMM PF09323 gene gene1712 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3566 BCG9842_B3567 BCG9842_B3567 BCG9842_B3567 1636451 1637428 + putative membrane protein identified by match to protein family HMM PF03773 gene gene1711 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3567 BCG9842_B3568 BCG9842_B3568 BCG9842_B3568 1635081 1636268 - putative cobalamin synthesis protein identified by match to protein family HMM PF02492%3B match to protein family HMM PF07683 gene gene1710 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3568 BCG9842_B3569 BCG9842_B3569 BCG9842_B3569 1634821 1635045 + conserved hypothetical protein gene gene1709 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3569 BCG9842_B3570 BCG9842_B3570 BCG9842_B3570 1634464 1634634 + hypothetical protein identified by glimmer%3B putative gene gene1708 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3570 BCG9842_B3571 BCG9842_B3571 BCG9842_B3571 1633371 1634270 + cation efflux family protein identified by match to protein family HMM PF01545%3B match to protein family HMM TIGR01297 gene gene1707 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3571 BCG9842_B3572 BCG9842_B3572 BCG9842_B3572 1632086 1633159 - BNR repeat domain protein identified by match to protein family HMM PF02012 gene gene1706 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3572 BCG9842_B3573 BCG9842_B3573 BCG9842_B3573 1630938 1632044 + ECF-type sigma factor negative effector gene gene1705 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3573 BCG9842_B3574 BCG9842_B3574 BCG9842_B3574 1630375 1630941 + RNA polymerase sigma-70 factor%2C ECF subfamily identified by match to protein family HMM PF04542%3B match to protein family HMM PF04545%3B match to protein family HMM PF08281%3B match to protein family HMM TIGR02937 gene gene1704 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3574 BCG9842_B3575 BCG9842_B3575 asnO2 asnO2 1628290 1630113 - asparagine synthetase%2C glutamine-hydrolyzing identified by match to protein family HMM PF00310%3B match to protein family HMM PF00733%3B match to protein family HMM TIGR01536 gene gene1703 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3575 BCG9842_B3576 BCG9842_B3576 BCG9842_B3576 1627453 1628247 + group-specific protein gene gene1702 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3576 BCG9842_B3577 BCG9842_B3577 BCG9842_B3577 1626888 1627298 - putative transcriptional regulator identified by match to protein family HMM PF01047 gene gene1701 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3577 BCG9842_B3578 BCG9842_B3578 BCG9842_B3578 1626575 1626904 - conserved hypothetical protein gene gene1700 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3578 BCG9842_B3579 BCG9842_B3579 BCG9842_B3579 1625682 1626614 - hydrolase%2C alpha/beta fold family identified by match to protein family HMM PF00561 gene gene1699 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3579 BCG9842_B3580 BCG9842_B3580 BCG9842_B3580 1625289 1625660 + hypothetical protein identified by glimmer%3B putative gene gene1698 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3580 BCG9842_B3581 BCG9842_B3581 BCG9842_B3581 1624624 1625199 + phosphoglycerate mutase family protein identified by match to protein family HMM PF00300 gene gene1697 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3581 BCG9842_B3582 BCG9842_B3582 BCG9842_B3582 1623818 1624471 + conserved hypothetical protein gene gene1696 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3582 BCG9842_B3583 BCG9842_B3583 BCG9842_B3583 1622676 1623767 + conserved domain protein gene gene1695 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3583 BCG9842_B3584 BCG9842_B3584 BCG9842_B3584 1622277 1622438 + hypothetical protein identified by glimmer%3B putative gene gene1694 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3584 BCG9842_B3585 BCG9842_B3585 BCG9842_B3585 1622095 1622211 + hypothetical protein identified by glimmer%3B putative gene gene1693 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3585 BCG9842_B3586 BCG9842_B3586 BCG9842_B3586 1621632 1622054 - conserved hypothetical protein gene gene1692 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3586 BCG9842_B3587 BCG9842_B3587 BCG9842_B3587 1620749 1621582 + conserved domain protein gene gene1691 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3587 BCG9842_B3588 BCG9842_B3588 BCG9842_B3588 1619469 1620728 + metallo-beta-lactamase family protein identified by match to protein family HMM PF00753%3B match to protein family HMM PF07521 gene gene1690 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3588 BCG9842_B3589 BCG9842_B3589 BCG9842_B3589 1617799 1619469 + putative ABC transporter%2C permease protein identified by match to protein family HMM PF00528 gene gene1689 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3589 BCG9842_B3590 BCG9842_B3590 BCG9842_B3590 1616761 1617786 + putative ABC transporter%2C substrate-binding protein identified by match to protein family HMM PF01547 gene gene1688 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3590 BCG9842_B3591 BCG9842_B3591 BCG9842_B3591 1615791 1616783 + ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005 gene gene1687 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3591 BCG9842_B3592 BCG9842_B3592 BCG9842_B3592 1614735 1615628 - transcriptional regulator%2C LysR family identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466 gene gene1686 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3592 BCG9842_B3593 BCG9842_B3593 BCG9842_B3593 1614170 1614694 + putative lipoprotein gene gene1685 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3593 BCG9842_B3594 BCG9842_B3594 BCG9842_B3594 1612788 1614056 + putative permease identified by match to protein family HMM PF07690 gene gene1684 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3594 BCG9842_B3595 BCG9842_B3595 BCG9842_B3595 1611456 1612670 - DNA-binding protein identified by match to protein family HMM PF01381 gene gene1683 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3595 BCG9842_B3596 BCG9842_B3596 BCG9842_B3596 1611210 1611389 - small acid-soluble spore protein%2C H-type identified by match to protein family HMM PF08141%3B match to protein family HMM TIGR02861 gene gene1682 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3596 BCG9842_B3597 BCG9842_B3597 BCG9842_B3597 1608767 1610992 - glycosyltransferase identified by match to protein family HMM PF00535%3B match to protein family HMM PF07238 gene gene1681 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3597 BCG9842_B3598 BCG9842_B3598 BCG9842_B3598 1608360 1608695 - jemb identified by match to protein family HMM PF03992 gene gene1680 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3598 BCG9842_B3599 BCG9842_B3599 BCG9842_B3599 1607773 1608357 - dienelactone hydrolase family identified by match to protein family HMM PF01738 gene gene1679 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3599 BCG9842_B3600 BCG9842_B3600 BCG9842_B3600 1607523 1607693 + hypothetical protein identified by glimmer%3B putative gene gene1678 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3600 BCG9842_B3601 BCG9842_B3601 BCG9842_B3601 1607149 1607460 + conserved hypothetical protein identified by match to protein family HMM PF05437 gene gene1677 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3601 BCG9842_B3602 BCG9842_B3602 BCG9842_B3602 1606433 1607158 + AzlC family protein identified by match to protein family HMM PF03591 gene gene1676 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3602 BCG9842_B3603 BCG9842_B3603 BCG9842_B3603 1605604 1606440 + conserved hypothetical protein identified by match to protein family HMM PF01978 gene gene1675 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3603 BCG9842_B3604 BCG9842_B3604 BCG9842_B3604 1604876 1605586 + alanyl-tRNA synthetase domain protein identified by match to protein family HMM PF07973 gene gene1674 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3604 BCG9842_B3605 BCG9842_B3605 BCG9842_B3605 1603439 1604737 + putative nitrilotriacetate monooxygenase component A gene gene1673 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3605 BCG9842_B3606 BCG9842_B3606 BCG9842_B3606 1602496 1603269 + putative flagellar basal-body rod protein identified by match to protein family HMM PF00460%3B match to protein family HMM PF06429%3B match to protein family HMM TIGR03506 gene gene1672 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3606 BCG9842_B3607 BCG9842_B3607 BCG9842_B3607 1601143 1602453 + putative flagellar biosynthetic protein FlhF identified by match to protein family HMM PF00448%3B match to protein family HMM TIGR03499 gene gene1671 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3607 BCG9842_B3608 BCG9842_B3608 flhA flhA 1599062 1601128 + Flagellar biosynthesis protein FlhA identified by match to protein family HMM PF00771 gene gene1670 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3608 BCG9842_B3609 BCG9842_B3609 BCG9842_B3609 1597992 1599038 + putative flagellar biosynthetic protein FlhB identified by match to protein family HMM PF01312 gene gene1669 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3609 BCG9842_B3610 BCG9842_B3610 fliR fliR 1597220 1597981 + flagellar biosynthetic protein FliR identified by match to protein family HMM PF01311 gene gene1668 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3610 BCG9842_B3611 BCG9842_B3611 BCG9842_B3611 1596929 1597204 + putative flagellar biosynthetic protein FliQ gene gene1667 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3611 BCG9842_B3612 BCG9842_B3612 BCG9842_B3612 1596137 1596895 + putative flagellar biosynthetic protein FliP identified by match to protein family HMM PF00813 gene gene1666 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3612 BCG9842_B3613 BCG9842_B3613 BCG9842_B3613 1595820 1596140 + conserved hypothetical protein gene gene1665 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3613 BCG9842_B3614 BCG9842_B3614 BCG9842_B3614 1595448 1595807 + putative flagellar motor switch protein FliN identified by match to protein family HMM PF01052%3B match to protein family HMM TIGR02480 gene gene1664 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3614 BCG9842_B3615 BCG9842_B3615 BCG9842_B3615 1594451 1595437 + putative flagellar motor switch protein FliM identified by match to protein family HMM PF01052%3B match to protein family HMM PF02154 gene gene1663 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3615 BCG9842_B3616 BCG9842_B3616 BCG9842_B3616 1594212 1594436 + flagellar motor switch protein FliN domain protein gene gene1662 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3616 BCG9842_B3617 BCG9842_B3617 BCG9842_B3617 1593364 1594149 + transglycosylase%2C SLT family identified by match to protein family HMM PF01464 gene gene1661 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3617 BCG9842_B3618 BCG9842_B3618 BCG9842_B3618 1592255 1593106 - flagellin identified by match to protein family HMM PF00669%3B match to protein family HMM PF00700 gene gene1660 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3618 BCG9842_B3619 BCG9842_B3619 BCG9842_B3619 1591441 1591959 - transposase identified by match to protein family HMM PF01527 gene gene1659 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3619 BCG9842_B3620 BCG9842_B3620 BCG9842_B3620 1590605 1591402 - transposase identified by match to protein family HMM PF00665 gene gene1658 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3620 BCG9842_B3621 BCG9842_B3621 BCG9842_B3621 1586760 1590323 + conserved hypothetical protein gene gene1657 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3621 BCG9842_B3622 BCG9842_B3622 BCG9842_B3622 1585075 1586022 + conserved hypothetical protein gene gene1656 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3622 BCG9842_B3623 BCG9842_B3623 BCG9842_B3623 1583429 1584337 + chemotaxis protein CheV identified by match to protein family HMM PF00072%3B match to protein family HMM PF01584 gene gene1655 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3623 BCG9842_B3624 BCG9842_B3624 BCG9842_B3624 1582821 1583306 + conserved hypothetical protein gene gene1654 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3624 BCG9842_B3625 BCG9842_B3625 BCG9842_B3625 1582175 1582510 + conserved hypothetical protein gene gene1653 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3625 BCG9842_B3626 BCG9842_B3626 BCG9842_B3626 1580902 1582125 + flagellar hook protein identified by match to protein family HMM PF00460%3B match to protein family HMM PF06429%3B match to protein family HMM PF07559%3B match to protein family HMM TIGR03506 gene gene1652 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3626 BCG9842_B3627 BCG9842_B3627 BCG9842_B3627 1580307 1580885 + flagellar hook assembly protein family protein identified by match to protein family HMM PF03963 gene gene1651 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3627 BCG9842_B3628 BCG9842_B3628 BCG9842_B3628 1579194 1580303 + conserved hypothetical protein gene gene1650 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3628 BCG9842_B3629 BCG9842_B3629 BCG9842_B3629 1578773 1579183 + conserved hypothetical protein gene gene1649 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3629 BCG9842_B3630 BCG9842_B3630 BCG9842_B3630 1577351 1578655 + putative flagellum-specific ATP synthase identified by match to protein family HMM PF00006%3B match to protein family HMM TIGR01026%3B match to protein family HMM TIGR03497 gene gene1648 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3630 BCG9842_B3631 BCG9842_B3631 BCG9842_B3631 1576665 1577354 + conserved hypothetical protein gene gene1647 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3631 BCG9842_B3632 BCG9842_B3632 fliG fliG 1575674 1576678 + flagellar motor switch protein FliG identified by match to protein family HMM PF01706%3B match to protein family HMM TIGR00207 gene gene1646 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3632 BCG9842_B3633 BCG9842_B3633 BCG9842_B3633 1574083 1575660 + putative flagellar M-ring protein FliF identified by match to protein family HMM PF01514%3B match to protein family HMM PF08345%3B match to protein family HMM TIGR00206 gene gene1645 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3633 BCG9842_B3634 BCG9842_B3634 BCG9842_B3634 1573761 1574060 + putative flagellar hook-basal body complex protein FliE gene gene1644 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3634 BCG9842_B3635 BCG9842_B3635 flgC flgC 1573331 1573744 + flagellar basal-body rod protein FlgC identified by match to protein family HMM PF06429%3B match to protein family HMM TIGR01395 gene gene1643 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3635 BCG9842_B3636 BCG9842_B3636 flgB flgB 1572904 1573311 + flagellar basal-body rod protein FlgB identified by match to protein family HMM TIGR01396 gene gene1642 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3636 BCG9842_B3637 BCG9842_B3637 BCG9842_B3637 1572667 1572789 + hypothetical protein identified by glimmer%3B putative gene gene1641 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3637 BCG9842_B3638 BCG9842_B3638 BCG9842_B3638 1572266 1572538 + conserved hypothetical protein gene gene1640 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3638 BCG9842_B3639 BCG9842_B3639 BCG9842_B3639 1571908 1572276 + putative flagellar protein FliS gene gene1639 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3639 BCG9842_B3640 BCG9842_B3640 BCG9842_B3640 1570566 1571885 + flagellar hook-associated protein identified by match to protein family HMM PF02465%3B match to protein family HMM PF07195 gene gene1638 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3640 BCG9842_B3641 BCG9842_B3641 BCG9842_B3641 1569685 1570548 + putative flagellar hook-associated protein FlgL identified by match to protein family HMM TIGR02550 gene gene1637 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3641 BCG9842_B3642 BCG9842_B3642 flgK flgK 1568345 1569643 + flagellar hook-associated protein FlgK identified by match to protein family HMM PF06429%3B match to protein family HMM TIGR02492 gene gene1636 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3642 BCG9842_B3643 BCG9842_B3643 BCG9842_B3643 1567875 1568327 + conserved domain protein gene gene1635 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3643 BCG9842_B3644 BCG9842_B3644 BCG9842_B3644 1567395 1567859 + conserved hypothetical protein gene gene1634 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3644 BCG9842_B3645 BCG9842_B3645 BCG9842_B3645 1566754 1567251 - conserved hypothetical protein gene gene1633 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3645 BCG9842_B3646 BCG9842_B3646 cheR cheR 1565932 1566714 - chemotaxis protein methyltransferase CheR identified by match to protein family HMM PF01739%3B match to protein family HMM PF03705 gene gene1632 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3646 BCG9842_B3647 BCG9842_B3647 BCG9842_B3647 1565184 1565900 + hypothetical protein identified by glimmer%3B putative gene gene1631 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3647 BCG9842_B3648 BCG9842_B3648 BCG9842_B3648 1563750 1565156 + hypothetical protein identified by glimmer%3B putative gene gene1630 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3648 BCG9842_B3649 BCG9842_B3649 BCG9842_B3649 1562083 1563720 + putative flagellar motor switch protein identified by match to protein family HMM PF01052%3B match to protein family HMM PF04509 gene gene1629 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3649 BCG9842_B3650 BCG9842_B3650 BCG9842_B3650 1559906 1561909 + chemotaxis protein CheA identified by match to protein family HMM PF01584%3B match to protein family HMM PF01627%3B match to protein family HMM PF02518%3B match to protein family HMM PF02895%3B match to protein family HMM PF07194 gene gene1628 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3650 BCG9842_B3651 BCG9842_B3651 BCG9842_B3651 1559408 1559776 + chemotaxis response regulator identified by match to protein family HMM PF00072 gene gene1627 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3651 BCG9842_B3652 BCG9842_B3652 BCG9842_B3652 1558580 1559257 + putative chemotaxis protein MotB identified by match to protein family HMM PF00691 gene gene1626 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3652 BCG9842_B3653 BCG9842_B3653 BCG9842_B3653 1557727 1558560 + putative chemotaxis protein MotA identified by match to protein family HMM PF01618 gene gene1625 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3653 BCG9842_B3654 BCG9842_B3654 BCG9842_B3654 1556952 1557554 - conserved hypothetical protein identified by match to protein family HMM PF01966 gene gene1624 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3654 BCG9842_B3655 BCG9842_B3655 hfq1 hfq1 1556736 1556924 + host factor-I protein identified by match to protein family HMM PF01423%3B match to protein family HMM TIGR02383 gene gene1623 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3655 BCG9842_B3656 BCG9842_B3656 BCG9842_B3656 1556464 1556682 + stage 0 sporulation regulatory protein identified by match to protein family HMM PF09388 gene gene1622 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3656 BCG9842_B3657 BCG9842_B3657 BCG9842_B3657 1556111 1556230 - conserved hypothetical protein identified by match to protein family HMM PF09680%3B match to protein family HMM TIGR01732 gene gene1621 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3657 BCG9842_B3658 BCG9842_B3658 BCG9842_B3658 1554421 1555146 - putative membrane protein identified by match to protein family HMM PF01925 gene gene1620 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3658 BCG9842_B3659 BCG9842_B3659 BCG9842_B3659 1554111 1554374 + RNA polymerase sigma-70 factor gene gene1619 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3659 BCG9842_B3660 BCG9842_B3660 BCG9842_B3660 1553155 1553889 + nitroreductase family protein identified by match to protein family HMM PF00881 gene gene1618 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3660 BCG9842_B3661 BCG9842_B3661 BCG9842_B3661 1552490 1553008 - transposase identified by match to protein family HMM PF01527 gene gene1617 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3661 BCG9842_B3662 BCG9842_B3662 BCG9842_B3662 1551654 1552451 - integrase core domain protein identified by match to protein family HMM PF00665 gene gene1616 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3662 BCG9842_B3663 BCG9842_B3663 BCG9842_B3663 1551239 1551556 + conserved hypothetical protein gene gene1615 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3663 BCG9842_B3664 BCG9842_B3664 BCG9842_B3664 1550512 1551090 + conserved hypothetical protein identified by match to protein family HMM PF02698 gene gene1614 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3664 BCG9842_B3665 BCG9842_B3665 BCG9842_B3665 1549685 1550350 - conserved hypothetical protein identified by match to protein family HMM PF04239 gene gene1613 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3665 BCG9842_B3666 BCG9842_B3666 BCG9842_B3666 1548294 1549649 + putative MATE efflux family protein identified by match to protein family HMM PF01554%3B match to protein family HMM TIGR00797 gene gene1612 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3666 BCG9842_B3667 BCG9842_B3667 BCG9842_B3667 1547316 1548146 + transcriptional regulator%2C MerR family identified by match to protein family HMM PF00376 gene gene1611 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3667 BCG9842_B3668 BCG9842_B3668 BCG9842_B3668 1545548 1547221 + RNA-metabolising metallo-beta-lactamase identified by match to protein family HMM PF00753%3B match to protein family HMM PF07521%3B match to protein family HMM TIGR00649 gene gene1610 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3668 BCG9842_B3669 BCG9842_B3669 BCG9842_B3669 1544053 1545216 - germination protein gerN identified by match to protein family HMM PF00999%3B match to protein family HMM TIGR00932 gene gene1609 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3669 BCG9842_B3670 BCG9842_B3670 BCG9842_B3670 1543708 1543986 + hypothetical protein identified by glimmer%3B putative gene gene1608 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3670 BCG9842_B3671 BCG9842_B3671 BCG9842_B3671 1542291 1543643 + putative adenosylmethionine--8-amino-7-oxononanoate aminotransferase identified by match to protein family HMM PF00202 gene gene1607 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3671 BCG9842_B3672 BCG9842_B3672 BCG9842_B3672 1540552 1542102 + sodium/solute symporter family protein identified by match to protein family HMM PF00474%3B match to protein family HMM TIGR00813 gene gene1606 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3672 BCG9842_B3673 BCG9842_B3673 BCG9842_B3673 1540208 1540549 + conserved hypothetical protein identified by match to protein family HMM PF04341 gene gene1605 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3673 BCG9842_B3674 BCG9842_B3674 BCG9842_B3674 1539355 1539984 + fatty acid hydroxylase-like protein identified by match to protein family HMM PF04116 gene gene1604 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3674 BCG9842_B3675 BCG9842_B3675 BCG9842_B3675 1538983 1539276 + hypothetical protein identified by glimmer%3B putative gene gene1603 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3675 BCG9842_B3676 BCG9842_B3676 BCG9842_B3676 1538220 1538963 + putative membrane protein identified by match to protein family HMM PF01810 gene gene1602 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3676 BCG9842_B3677 BCG9842_B3677 BCG9842_B3677 1537477 1538205 + conserved hypothetical protein identified by match to protein family HMM PF08892 gene gene1601 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3677 BCG9842_B3678 BCG9842_B3678 BCG9842_B3678 1537325 1537462 - hypothetical protein identified by glimmer%3B putative gene gene1600 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3678 BCG9842_B3679 BCG9842_B3679 cspB1 cspB1 1537017 1537214 - cold shock protein CspB identified by match to protein family HMM PF00313 gene gene1599 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3679 BCG9842_B3680 BCG9842_B3680 BCG9842_B3680 1536649 1536897 - conserved hypothetical protein gene gene1598 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3680 BCG9842_B3681 BCG9842_B3681 BCG9842_B3681 1536439 1536615 + conserved hypothetical protein gene gene1597 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3681 BCG9842_B3682 BCG9842_B3682 BCG9842_B3682 1535767 1536426 + conserved domain protein identified by match to protein family HMM PF00075 gene gene1596 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3682 BCG9842_B3683 BCG9842_B3683 BCG9842_B3683 1535130 1535615 + conserved hypothetical protein identified by match to protein family HMM PF06177 gene gene1595 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3683 BCG9842_B3685 BCG9842_B3685 BCG9842_B3685 1534074 1534946 - putative lacX protein identified by match to protein family HMM PF01263 gene gene1594 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3685 BCG9842_B3686 BCG9842_B3686 rnhA rnhA 1533618 1534004 - RNase H identified by match to protein family HMM PF00075 gene gene1593 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3686 BCG9842_B3687 BCG9842_B3687 BCG9842_B3687 1532699 1533604 - transporter%2C EamA family identified by match to protein family HMM PF00892 gene gene1592 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3687 BCG9842_B3688 BCG9842_B3688 BCG9842_B3688 1532436 1532696 + hypothetical protein identified by glimmer%3B putative gene gene1591 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3688 BCG9842_B3689 BCG9842_B3689 BCG9842_B3689 1531693 1532253 - isochorismatase family protein identified by match to protein family HMM PF00857 gene gene1590 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3689 BCG9842_B3690 BCG9842_B3690 BCG9842_B3690 1530790 1531650 + acetyltransferase%2C GNAT family identified by match to protein family HMM PF00583 gene gene1589 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3690 BCG9842_B3691 BCG9842_B3691 BCG9842_B3691 1515635 1530667 - conserved repeat domain protein identified by match to protein family HMM PF01345%3B match to protein family HMM TIGR01451 gene gene1588 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3691 BCG9842_B3692 BCG9842_B3692 BCG9842_B3692 1513979 1515526 + hypothetical protein identified by glimmer%3B putative gene gene1587 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3692 BCG9842_B3693 BCG9842_B3693 BCG9842_B3693 1512834 1513886 + glycosyltransferase identified by match to protein family HMM PF00534 gene gene1586 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3693 BCG9842_B3694 BCG9842_B3694 BCG9842_B3694 1512037 1512837 + glycosyl transferase%2C group 2 family protein identified by match to protein family HMM PF00535 gene gene1585 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3694 BCG9842_B3695 BCG9842_B3695 BCG9842_B3695 1510848 1512062 + putative membrane protein identified by match to protein family HMM PF04932 gene gene1584 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3695 BCG9842_B3696 BCG9842_B3696 BCG9842_B3696 1509408 1510844 + polysaccharide synthase family protein identified by match to protein family HMM PF01943%3B match to protein family HMM PF03023 gene gene1583 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3696 BCG9842_B3697 BCG9842_B3697 BCG9842_B3697 1508713 1509351 + putative capsular polysaccharide biosynthesis glycosyltransferase identified by match to protein family HMM PF02397 gene gene1582 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3697 BCG9842_B3698 BCG9842_B3698 BCG9842_B3698 1508080 1508694 + putative capsular polysaccharide biosynthesis protein tyrosine kinase gene gene1581 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3698 BCG9842_B3699 BCG9842_B3699 BCG9842_B3699 1507344 1508087 + chain length determinant protein identified by match to protein family HMM PF02706 gene gene1580 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3699 BCG9842_B3700 BCG9842_B3700 BCG9842_B3700 1506150 1507343 + acyltransferase family protein identified by match to protein family HMM PF01757 gene gene1579 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3700 BCG9842_B3701 BCG9842_B3701 BCG9842_B3701 1505681 1505821 + conserved hypothetical protein gene gene1578 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3701 BCG9842_B3702 BCG9842_B3702 BCG9842_B3702 1504458 1505324 + 5'-3' exonuclease family protein identified by match to protein family HMM PF01367%3B match to protein family HMM PF02739 gene gene1577 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3702 BCG9842_B3703 BCG9842_B3703 BCG9842_B3703 1503600 1504325 + putative cation transporter gene gene1576 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3703 BCG9842_B3705 BCG9842_B3705 BCG9842_B3705 1502500 1502886 + conserved hypothetical protein identified by match to protein family HMM PF03994 gene gene1575 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3705 BCG9842_B3706 BCG9842_B3706 BCG9842_B3706 1501269 1502507 + glutathionylspermidine synthase identified by match to protein family HMM PF03738 gene gene1574 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3706 BCG9842_B3707 BCG9842_B3707 BCG9842_B3707 1500954 1501265 + putative lipoprotein gene gene1573 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3707 BCG9842_B3708 BCG9842_B3708 BCG9842_B3708 1500421 1500870 - hypothetical protein identified by glimmer%3B putative gene gene1572 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3708 BCG9842_B3709 BCG9842_B3709 BCG9842_B3709 1500183 1500366 + 6S / SsrS RNA ncRNA gene1571 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3709 BCG9842_B3710 BCG9842_B3710 BCG9842_B3710 1499979 1500161 + 6S / SsrS RNA ncRNA gene1570 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3710 BCG9842_B3711 BCG9842_B3711 BCG9842_B3711 1499029 1499862 + rhodanese-like domain protein identified by match to protein family HMM PF00581 gene gene1569 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3711 BCG9842_B3712 BCG9842_B3712 BCG9842_B3712 1498754 1499026 + conserved hypothetical protein gene gene1568 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3712 BCG9842_B3713 BCG9842_B3713 BCG9842_B3713 1498262 1498723 + acetyltransferase%2C GNAT family identified by match to protein family HMM PF00583 gene gene1567 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3713 BCG9842_B3714 BCG9842_B3714 BCG9842_B3714 1497936 1498190 - hypothetical protein identified by glimmer%3B putative gene gene1566 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3714 BCG9842_B3715 BCG9842_B3715 BCG9842_B3715 1494273 1497932 + conserved hypothetical protein identified by match to protein family HMM PF00350%3B match to protein family HMM PF01926 gene gene1565 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3715 BCG9842_B3716 BCG9842_B3716 BCG9842_B3716 1493923 1494078 + conserved hypothetical protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift gene gene1564 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3716 BCG9842_B3717 BCG9842_B3717 BCG9842_B3717 1492560 1493723 - conserved hypothetical protein identified by match to protein family HMM PF04171%3B match to protein family HMM PF04235 gene gene1563 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3717 BCG9842_B3718 BCG9842_B3718 pbuX pbuX 1491222 1492544 + xanthine permease identified by match to protein family HMM PF00860%3B match to protein family HMM PF00916%3B match to protein family HMM TIGR00801%3B match to protein family HMM TIGR03173 gene gene1562 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3718 BCG9842_B3719 BCG9842_B3719 xpt xpt 1490625 1491218 + xanthine phosphoribosyltransferase identified by match to protein family HMM PF00156%3B match to protein family HMM TIGR01744 gene gene1561 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3719 BCG9842_B3721 BCG9842_B3721 maP2 maP2 1489555 1490301 + methionine aminopeptidase identified by match to protein family HMM PF00557%3B match to protein family HMM TIGR00500 gene gene1560 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3721 BCG9842_B3722 BCG9842_B3722 BCG9842_B3722 1488054 1488950 - putative macrolide 2-phosphotransferase identified by match to protein family HMM PF01636 gene gene1559 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3722 BCG9842_B3723 BCG9842_B3723 BCG9842_B3723 1487543 1488013 + acetyltransferase%2C GNAT family identified by match to protein family HMM PF00583 gene gene1558 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3723 BCG9842_B3724 BCG9842_B3724 BCG9842_B3724 1485979 1487496 + thermostable carboxypeptidase 1 identified by match to protein family HMM PF02074 gene gene1557 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3724 BCG9842_B3725 BCG9842_B3725 BCG9842_B3725 1483941 1485878 + conserved hypothetical protein gene gene1556 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3725 BCG9842_B3726 BCG9842_B3726 BCG9842_B3726 1483619 1483801 + hypothetical protein identified by glimmer%3B putative gene gene1555 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3726 BCG9842_B3727 BCG9842_B3727 BCG9842_B3727 1482418 1483557 + conserved hypothetical protein identified by match to protein family HMM PF01170%3B match to protein family HMM PF02926 gene gene1554 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3727 BCG9842_B3728 BCG9842_B3728 BCG9842_B3728 1481845 1482240 + Bacterial RNase P class B gene gene1553 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3728 BCG9842_B3729 BCG9842_B3729 BCG9842_B3729 1481425 1481760 + conserved hypothetical protein identified by match to protein family HMM PF05103%3B match to protein family HMM TIGR03544 gene gene1552 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3729 BCG9842_B3730 BCG9842_B3730 BCG9842_B3730 1480773 1481327 + conserved hypothetical protein identified by match to protein family HMM PF06908 gene gene1551 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3730 BCG9842_B3731 BCG9842_B3731 BCG9842_B3731 1480294 1480716 + putative spore coat protein D gene gene1550 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3731 BCG9842_B3732 BCG9842_B3732 BCG9842_B3732 1479539 1480138 + spore coat protein gene gene1549 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3732 BCG9842_B3733 BCG9842_B3733 BCG9842_B3733 1479170 1479361 - conserved hypothetical protein gene gene1548 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3733 BCG9842_B3734 BCG9842_B3734 BCG9842_B3734 1478799 1479143 + conserved hypothetical protein identified by match to protein family HMM PF08807 gene gene1547 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3734 BCG9842_B3735 BCG9842_B3735 BCG9842_B3735 1478541 1478783 + hypothetical protein identified by glimmer%3B putative gene gene1546 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3735 BCG9842_B3736 BCG9842_B3736 BCG9842_B3736 1478276 1478455 - hypothetical protein identified by glimmer%3B putative gene gene1545 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3736 BCG9842_B3737 BCG9842_B3737 BCG9842_B3737 1477099 1478124 + conserved hypothetical protein gene gene1544 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3737 BCG9842_B3738 BCG9842_B3738 recU recU 1476393 1476995 - recombination protein U identified by match to protein family HMM PF03838%3B match to protein family HMM TIGR00648 gene gene1543 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3738 BCG9842_B3739 BCG9842_B3739 BCG9842_B3739 1474384 1476327 - penicillin-binding protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a premature stop%3B identified by match to protein family HMM PF00905%3B match to protein family HMM PF00912%3B match to protein family HMM TIGR02074 gene gene1542 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3739 BCG9842_B3740 BCG9842_B3740 BCG9842_B3740 1473700 1474164 + hypothetical protein identified by glimmer%3B putative gene gene1541 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3740 BCG9842_B3741 BCG9842_B3741 BCG9842_B3741 1473083 1473601 + conserved hypothetical protein gene gene1540 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3741 BCG9842_B3742 BCG9842_B3742 nth nth 1472432 1473079 + endonuclease III identified by match to protein family HMM PF00633%3B match to protein family HMM PF00730%3B match to protein family HMM TIGR01083 gene gene1539 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3742 BCG9842_B3743 BCG9842_B3743 dnaD dnaD 1471709 1472416 + DNA replication protein DnaD identified by match to protein family HMM PF04271%3B match to protein family HMM TIGR01446 gene gene1538 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3743 BCG9842_B3744 BCG9842_B3744 aspB aspB 1470401 1471588 + aspartate aminotransferase identified by match to protein family HMM PF00155 gene gene1537 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3744 BCG9842_B3745 BCG9842_B3745 BCG9842_B3745 1469879 1470382 + conserved hypothetical protein identified by match to protein family HMM PF03413 gene gene1536 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3745 BCG9842_B3746 BCG9842_B3746 BCG9842_B3746 1469701 1469871 + conserved hypothetical protein gene gene1535 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3746 BCG9842_B3747 BCG9842_B3747 BCG9842_B3747 1466646 1469450 + putative DnaQ family exonuclease/DinG family helicase identified by match to protein family HMM PF00929%3B match to protein family HMM TIGR00573%3B match to protein family HMM TIGR01407 gene gene1534 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3747 BCG9842_B3748 BCG9842_B3748 panD panD 1466131 1466514 + aspartate 1-decarboxylase identified by match to protein family HMM PF02261%3B match to protein family HMM TIGR00223 gene gene1533 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3748 BCG9842_B3749 BCG9842_B3749 panC panC 1465270 1466118 + pantoate--beta-alanine ligase identified by match to protein family HMM PF02569%3B match to protein family HMM TIGR00018%3B match to protein family HMM TIGR00125 gene gene1532 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3749 BCG9842_B3750 BCG9842_B3750 panB panB 1464434 1465270 + 3-methyl-2-oxobutanoate hydroxymethyltransferase identified by match to protein family HMM PF02548%3B match to protein family HMM TIGR00222 gene gene1531 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3750 BCG9842_B3751 BCG9842_B3751 BCG9842_B3751 1463524 1463913 - conserved hypothetical protein gene gene1530 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3751 BCG9842_B3752 BCG9842_B3752 birA birA 1462416 1463396 + biotin operon repressor/biotin-[acetyl-CoA-carboxylase] ligase identified by match to protein family HMM PF02237%3B match to protein family HMM PF03099%3B match to protein family HMM PF08279%3B match to protein family HMM TIGR00121 gene gene1529 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3752 BCG9842_B3753 BCG9842_B3753 BCG9842_B3753 1461238 1462431 + tRNA nucleotidyltransferase/poly(A) polymerase family protein identified by match to protein family HMM PF01743 gene gene1528 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3753 BCG9842_B3754 BCG9842_B3754 BCG9842_B3754 1460106 1461251 + glycosyl transferase%2C group 1 family protein identified by match to protein family HMM PF00534 gene gene1527 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3754 BCG9842_B3755 BCG9842_B3755 BCG9842_B3755 1459405 1460109 + conserved hypothetical protein identified by match to protein family HMM PF02585 gene gene1526 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3755 BCG9842_B3756 BCG9842_B3756 mgsA mgsA 1458998 1459393 + methylglyoxal synthase identified by match to protein family HMM PF02142%3B match to protein family HMM TIGR00160 gene gene1525 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3756 BCG9842_B3757 BCG9842_B3757 dapB dapB 1458183 1458983 + dihydrodipicolinate reductase identified by match to protein family HMM PF01113%3B match to protein family HMM PF05173%3B match to protein family HMM TIGR00036 gene gene1524 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3757 BCG9842_B3758 BCG9842_B3758 BCG9842_B3758 1457785 1458183 + conserved hypothetical protein identified by match to protein family HMM PF03819 gene gene1523 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3758 BCG9842_B3759 BCG9842_B3759 BCG9842_B3759 1456697 1457578 - putative membrane protein identified by match to protein family HMM PF02588 gene gene1522 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3759 BCG9842_B3760 BCG9842_B3760 BCG9842_B3760 1456027 1456668 + uracil-DNA glycosylase family protein identified by match to protein family HMM PF03167 gene gene1521 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3760 BCG9842_B3761 BCG9842_B3761 BCG9842_B3761 1455244 1455924 + putative neutral zinc metallopeptidase identified by match to protein family HMM PF04298 gene gene1520 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3761 BCG9842_B3762 BCG9842_B3762 BCG9842_B3762 1454351 1455139 + conserved hypothetical protein identified by match to protein family HMM PF09577%3B match to protein family HMM TIGR02878 gene gene1519 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3762 BCG9842_B3763 BCG9842_B3763 BCG9842_B3763 1453558 1454244 + conserved hypothetical protein identified by match to protein family HMM PF07314%3B match to protein family HMM TIGR01906 gene gene1518 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3763 BCG9842_B3764 BCG9842_B3764 BCG9842_B3764 1452960 1453532 + putative membrane protein identified by match to protein family HMM PF07187 gene gene1517 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3764 BCG9842_B3765 BCG9842_B3765 qcrC qcrC 1452056 1452823 + menaquinol-cytochrome c reductase%2C cytochrome b/c subunit identified by match to protein family HMM PF00034 gene gene1516 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3765 BCG9842_B3766 BCG9842_B3766 qcrB qcrB 1451338 1452012 + menaquinol-cytochrome c reductase%2C cytochrome b subunit identified by match to protein family HMM PF00033 gene gene1515 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3766 BCG9842_B3767 BCG9842_B3767 qcrA qcrA 1450897 1451337 + menaquinol-cytochrome c reductase%2C iron-sulfur subunit identified by match to protein family HMM PF00355 gene gene1514 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3767 BCG9842_B3768 BCG9842_B3768 BCG9842_B3768 1450226 1450687 + conserved hypothetical protein gene gene1513 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3768 BCG9842_B3769 BCG9842_B3769 BCG9842_B3769 1449480 1450073 + conserved hypothetical protein identified by match to protein family HMM PF08858%3B match to protein family HMM PF08864 gene gene1512 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3769 BCG9842_B3770 BCG9842_B3770 BCG9842_B3770 1448201 1449463 + TPR domain protein identified by match to protein family HMM PF00515%3B match to protein family HMM PF07719%3B match to protein family HMM PF07720 gene gene1511 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3770 BCG9842_B3771 BCG9842_B3771 hisC1 hisC1 1446608 1447720 + histidinol-phosphate aminotransferase identified by match to protein family HMM PF00155%3B match to protein family HMM TIGR01141 gene gene1510 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3771 BCG9842_B3772 BCG9842_B3772 aroB aroB 1445390 1446475 + 3-dehydroquinate synthase identified by match to protein family HMM PF01761%3B match to protein family HMM TIGR01357 gene gene1509 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3772 BCG9842_B3773 BCG9842_B3773 aroC1 aroC1 1444218 1445390 + chorismate synthase identified by match to protein family HMM PF01264%3B match to protein family HMM TIGR00033 gene gene1508 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3773 BCG9842_B3774 BCG9842_B3774 BCG9842_B3774 1443507 1443953 + putative nucleoside diphosphate kinase identified by match to protein family HMM PF00334 gene gene1507 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3774 BCG9842_B3775 BCG9842_B3775 hepT hepT 1442420 1443382 + heptaprenyl diphosphate synthase component II identified by match to protein family HMM PF00348%3B match to protein family HMM TIGR02748 gene gene1506 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3775 BCG9842_B3776 BCG9842_B3776 menG menG 1441675 1442388 + 2-heptaprenyl-1%2C4-naphthoquinone methyltransferase identified by match to protein family HMM PF01209%3B match to protein family HMM PF02353%3B match to protein family HMM PF08241%3B match to protein family HMM PF08242%3B match to protein family HMM TIGR01934%3B match to protein family HMM TIGR02752 gene gene1505 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3776 BCG9842_B3777 BCG9842_B3777 BCG9842_B3777 1440947 1441636 + putative heptaprenyl diphosphate synthase component I identified by match to protein family HMM PF07307 gene gene1504 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3777 BCG9842_B3778 BCG9842_B3778 mtrA mtrA 1440149 1440718 + GTP cyclohydrolase I identified by match to protein family HMM PF01227%3B match to protein family HMM TIGR00063 gene gene1503 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3778 BCG9842_B3779 BCG9842_B3779 hup1 hup1 1439756 1440028 + DNA-binding protein HU identified by match to protein family HMM PF00216 gene gene1502 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3779 BCG9842_B3780 BCG9842_B3780 spoIVA spoIVA 1437978 1439456 + stage IV sporulation protein A identified by match to protein family HMM PF09547%3B match to protein family HMM TIGR02836 gene gene1501 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3780 BCG9842_B3781 BCG9842_B3781 BCG9842_B3781 1437022 1437735 + conserved hypothetical protein gene gene1500 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3781 BCG9842_B3782 BCG9842_B3782 BCG9842_B3782 1436755 1436958 + conserved hypothetical protein gene gene1499 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3782 BCG9842_B3783 BCG9842_B3783 BCG9842_B3783 1436236 1436487 + conserved hypothetical protein gene gene1498 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3783 BCG9842_B3784 BCG9842_B3784 gpsA gpsA 1435098 1436120 + glycerol-3-phosphate dehydrogenase (NAD(P)+) identified by match to protein family HMM PF01210%3B match to protein family HMM PF03807%3B match to protein family HMM PF07479 gene gene1497 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3784 BCG9842_B3785 BCG9842_B3785 engA engA 1433769 1435079 + ribosome-associated GTPase EngA identified by match to protein family HMM PF01926%3B match to protein family HMM PF08477%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR03594 gene gene1496 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3785 BCG9842_B3786 BCG9842_B3786 BCG9842_B3786 1433459 1433644 + conserved hypothetical protein gene gene1495 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3786 BCG9842_B3787 BCG9842_B3787 BCG9842_B3787 1432569 1433462 + conserved hypothetical protein gene gene1494 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3787 BCG9842_B3788 BCG9842_B3788 BCG9842_B3788 1431965 1432576 + putative membrane protein gene gene1493 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3788 BCG9842_B3789 BCG9842_B3789 BCG9842_B3789 1431713 1431847 - hypothetical protein identified by glimmer%3B putative gene gene1492 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3789 BCG9842_B3790 BCG9842_B3790 BCG9842_B3790 1430374 1431423 + isopentenyl-diphosphate delta-isomerase identified by match to protein family HMM TIGR02151 gene gene1491 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3790 BCG9842_B3791 BCG9842_B3791 rpsA rpsA 1429213 1430361 + ribosomal protein S1 identified by match to protein family HMM PF00575 gene gene1490 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3791 BCG9842_B3792 BCG9842_B3792 cmk cmk 1428203 1428880 + cytidylate kinase identified by match to protein family HMM PF02224%3B match to protein family HMM TIGR00017 gene gene1489 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3792 BCG9842_B3793 BCG9842_B3793 BCG9842_B3793 1427866 1427985 + hypothetical protein identified by glimmer%3B putative gene gene1488 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3793 BCG9842_B3794 BCG9842_B3794 ansA1 ansA1 1426746 1427678 - L-asparaginase identified by match to protein family HMM PF00710 gene gene1487 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3794 BCG9842_B3795 BCG9842_B3795 BCG9842_B3795 1425730 1426710 + pyridine nucleotide-disulfide oxidoreductase family protein identified by match to protein family HMM PF00070%3B match to protein family HMM PF03486%3B match to protein family HMM PF07992 gene gene1486 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3795 BCG9842_B3796 BCG9842_B3796 BCG9842_B3796 1425091 1425621 + N-acetylmuramoyl-L-alanine amidase%2C family 2 identified by match to protein family HMM PF01510 gene gene1485 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3796 BCG9842_B3797 BCG9842_B3797 BCG9842_B3797 1424775 1425011 + hypothetical protein identified by glimmer%3B putative gene gene1484 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3797 BCG9842_B3798 BCG9842_B3798 BCG9842_B3798 1424472 1424681 + hypothetical protein identified by glimmer%3B putative gene gene1483 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3798 BCG9842_B3799 BCG9842_B3799 gudB gudB 1423105 1424391 + glutamate dehydrogenase%2C NAD-specific identified by match to protein family HMM PF00208%3B match to protein family HMM PF02812 gene gene1482 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3799 BCG9842_B3800 BCG9842_B3800 BCG9842_B3800 1422185 1422793 + putative negative regulator of competence MecA identified by match to protein family HMM PF05389 gene gene1481 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3800 BCG9842_B3801 BCG9842_B3801 BCG9842_B3801 1421232 1422107 + transcriptional regulator%2C MerR family identified by match to protein family HMM PF00376 gene gene1480 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3801 BCG9842_B3802 BCG9842_B3802 BCG9842_B3802 1420456 1421232 + conserved hypothetical protein identified by match to protein family HMM PF00149 gene gene1479 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3802 BCG9842_B3803 BCG9842_B3803 BCG9842_B3803 1419909 1420388 + lysM domain protein identified by match to protein family HMM PF01476 gene gene1478 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3803 BCG9842_B3804 BCG9842_B3804 BCG9842_B3804 1419323 1419886 + CAAX amino terminal protease family protein identified by match to protein family HMM PF02517 gene gene1477 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3804 BCG9842_B3805 BCG9842_B3805 recQ1 recQ1 1417794 1419323 + ATP-dependent DNA helicase RecQ identified by match to protein family HMM PF00270%3B match to protein family HMM PF00271%3B match to protein family HMM TIGR00614 gene gene1476 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3805 BCG9842_B3806 BCG9842_B3806 BCG9842_B3806 1416743 1417804 + conserved hypothetical protein gene gene1475 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3806 BCG9842_B3807 BCG9842_B3807 fer fer 1416195 1416443 - ferredoxin gene gene1474 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3807 BCG9842_B3808 BCG9842_B3808 BCG9842_B3808 1415497 1416075 + conserved hypothetical protein gene gene1473 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3808 BCG9842_B3810 BCG9842_B3810 BCG9842_B3810 1414260 1414946 - hypothetical protein identified by glimmer%3B putative gene gene1472 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3810 BCG9842_B3811 BCG9842_B3811 BCG9842_B3811 1413492 1414106 + peptidase%2C M23/M37 family identified by match to protein family HMM PF01476%3B match to protein family HMM PF01551 gene gene1471 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3811 BCG9842_B3812 BCG9842_B3812 BCG9842_B3812 1412826 1413407 + putative ATP:cob(I)alamin adenosyltransferase identified by match to protein family HMM PF01923%3B match to protein family HMM TIGR00636 gene gene1470 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3812 BCG9842_B3813 BCG9842_B3813 resE resE 1410914 1412689 + sensor histidine kinase ResE identified by match to protein family HMM PF00512%3B match to protein family HMM PF00672%3B match to protein family HMM PF02518 gene gene1469 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3813 BCG9842_B3814 BCG9842_B3814 resD resD 1410198 1410914 + DNA-binding response regulator ResD identified by match to protein family HMM PF00072%3B match to protein family HMM PF00486 gene gene1468 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3814 BCG9842_B3815 BCG9842_B3815 resC resC 1408738 1409895 + resC protein identified by match to protein family HMM PF01578%3B match to protein family HMM TIGR03144 gene gene1467 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3815 BCG9842_B3816 BCG9842_B3816 resB resB 1407098 1408723 + resB protein identified by match to protein family HMM PF05140 gene gene1466 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3816 BCG9842_B3817 BCG9842_B3817 resA resA 1406455 1406976 + resA protein identified by match to protein family HMM PF00085%3B match to protein family HMM PF00578%3B match to protein family HMM PF02630%3B match to protein family HMM PF08534 gene gene1465 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3817 BCG9842_B3818 BCG9842_B3818 rluB rluB 1405620 1406348 + ribosomal large subunit pseudouridine synthase B identified by match to protein family HMM PF00849%3B match to protein family HMM PF01479%3B match to protein family HMM TIGR00093 gene gene1464 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3818 BCG9842_B3819 BCG9842_B3819 BCG9842_B3819 1404800 1405330 + spore maturation protein identified by match to protein family HMM PF07670 gene gene1463 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3819 BCG9842_B3820 BCG9842_B3820 spmA spmA 1404207 1404803 + spore maturation protein A identified by match to protein family HMM PF07670 gene gene1462 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3820 BCG9842_B3821 BCG9842_B3821 BCG9842_B3821 1403090 1404214 + D-alanyl-D-alanine carboxypeptidase family protein identified by match to protein family HMM PF00768%3B match to protein family HMM PF07943 gene gene1461 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3821 BCG9842_B3822 BCG9842_B3822 BCG9842_B3822 1402063 1402977 + superoxide dismutase identified by match to protein family HMM PF00081%3B match to protein family HMM PF02777 gene gene1460 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3822 BCG9842_B3823 BCG9842_B3823 BCG9842_B3823 1401466 1401957 + conserved hypothetical protein gene gene1459 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3823 BCG9842_B3824 BCG9842_B3824 BCG9842_B3824 1401054 1401443 + hypothetical protein identified by glimmer%3B putative gene gene1458 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3824 BCG9842_B3825 BCG9842_B3825 BCG9842_B3825 1398292 1400871 - putative lysylphosphatidylglycerol synthetase MprF identified by match to protein family HMM PF03706%3B match to protein family HMM PF04329%3B match to protein family HMM PF04330%3B match to protein family HMM PF04331 gene gene1457 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3825 BCG9842_B3826 BCG9842_B3826 BCG9842_B3826 1397514 1398287 + conserved domain protein gene gene1456 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3826 BCG9842_B3827 BCG9842_B3827 deoD deoD 1396615 1397322 - purine nucleoside phosphorylase identified by match to protein family HMM PF01048%3B match to protein family HMM TIGR00107 gene gene1455 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3827 BCG9842_B3828 BCG9842_B3828 BCG9842_B3828 1394494 1396308 - sensor histidine kinase identified by match to protein family HMM PF00512%3B match to protein family HMM PF00672%3B match to protein family HMM PF02518 gene gene1454 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3828 BCG9842_B3829 BCG9842_B3829 BCG9842_B3829 1393856 1394386 - site-specific recombinase%2C phage integrase family identified by match to protein family HMM PF00589 gene gene1453 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3829 BCG9842_B3830 BCG9842_B3830 BCG9842_B3830 1393540 1393734 - hypothetical protein identified by glimmer%3B putative gene gene1452 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3830 BCG9842_B3831 BCG9842_B3831 BCG9842_B3831 1392480 1393325 + conserved hypothetical protein identified by match to protein family HMM PF01904 gene gene1451 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3831 BCG9842_B3832 BCG9842_B3832 BCG9842_B3832 1391063 1392328 - sporulation kinase identified by match to protein family HMM PF00512%3B match to protein family HMM PF02518%3B match to protein family HMM TIGR00229 gene gene1450 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3832 BCG9842_B3833 BCG9842_B3833 BCG9842_B3833 1390293 1390520 + hypothetical protein identified by glimmer%3B putative gene gene1449 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3833 BCG9842_B3834 BCG9842_B3834 BCG9842_B3834 1389604 1390032 - group-specific protein gene gene1448 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3834 BCG9842_B3835 BCG9842_B3835 BCG9842_B3835 1387481 1389523 + penicillin-binding protein 1F (PBP-1F) identified by match to protein family HMM PF00905%3B match to protein family HMM PF00912%3B match to protein family HMM TIGR02074 gene gene1447 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3835 BCG9842_B3836 BCG9842_B3836 BCG9842_B3836 1386549 1387169 - conserved hypothetical protein identified by match to protein family HMM PF01865 gene gene1446 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3836 BCG9842_B3837 BCG9842_B3837 BCG9842_B3837 1385539 1386537 - phosphate transporter family protein identified by match to protein family HMM PF01384 gene gene1445 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3837 BCG9842_B3838 BCG9842_B3838 BCG9842_B3838 1384621 1385421 - putative membrane protein identified by match to protein family HMM PF01925 gene gene1444 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3838 BCG9842_B3839 BCG9842_B3839 BCG9842_B3839 1384100 1384327 + hypothetical protein identified by glimmer%3B putative gene gene1443 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3839 BCG9842_B3840 BCG9842_B3840 BCG9842_B3840 1383417 1383929 - putative transcriptional regulator identified by match to protein family HMM PF00027 gene gene1442 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3840 BCG9842_B3841 BCG9842_B3841 hmp hmp 1382176 1383384 + nitric oxide dioxygenase identified by match to protein family HMM PF00042%3B match to protein family HMM PF00175%3B match to protein family HMM PF00970 gene gene1441 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3841 BCG9842_B3842 BCG9842_B3842 BCG9842_B3842 1381498 1382016 + conserved domain protein gene gene1440 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3842 BCG9842_B3843 BCG9842_B3843 BCG9842_B3843 1380286 1381383 + putative membrane protein identified by match to protein family HMM PF02163 gene gene1439 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3843 BCG9842_B3844 BCG9842_B3844 BCG9842_B3844 1379940 1380137 - hypothetical protein identified by glimmer%3B putative gene gene1438 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3844 BCG9842_B3845 BCG9842_B3845 BCG9842_B3845 1378890 1379741 + ribosomal protein L5 domain protein gene gene1437 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3845 BCG9842_B3846 BCG9842_B3846 BCG9842_B3846 1378005 1378781 - methyltransferase%2C UbiE/COQ5 family identified by match to protein family HMM PF05175%3B match to protein family HMM PF08241%3B match to protein family HMM PF08242 gene gene1436 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3846 BCG9842_B3847 BCG9842_B3847 brnQ3 brnQ3 1375821 1377167 - branched-chain amino acid transport system II carrier protein identified by match to protein family HMM PF05525%3B match to protein family HMM TIGR00796 gene gene1435 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3847 BCG9842_B3848 BCG9842_B3848 BCG9842_B3848 1375533 1375796 + group-specific protein gene gene1434 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3848 BCG9842_B3849 BCG9842_B3849 BCG9842_B3849 1374768 1375400 + DNA-binding response regulator identified by match to protein family HMM PF00072%3B match to protein family HMM PF00196%3B match to protein family HMM PF08281 gene gene1433 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3849 BCG9842_B3850 BCG9842_B3850 BCG9842_B3850 1373716 1374771 + sensor histidine kinase identified by match to protein family HMM PF02518%3B match to protein family HMM PF07730 gene gene1432 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3850 BCG9842_B3851 BCG9842_B3851 BCG9842_B3851 1372976 1373716 + conserved hypothetical protein gene gene1431 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3851 BCG9842_B3852 BCG9842_B3852 BCG9842_B3852 1372206 1372868 + PspA/IM30 family protein identified by match to protein family HMM PF04012 gene gene1430 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3852 BCG9842_B3853 BCG9842_B3853 BCG9842_B3853 1371802 1372158 + conserved hypothetical protein gene gene1429 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3853 BCG9842_B3854 BCG9842_B3854 BCG9842_B3854 1370304 1371620 + Na+/H+ antiporter family protein identified by match to protein family HMM PF03553 gene gene1428 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3854 BCG9842_B3856 BCG9842_B3856 BCG9842_B3856 1369465 1369983 + conserved hypothetical protein identified by match to protein family HMM PF04167 gene gene1427 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3856 BCG9842_B3857 BCG9842_B3857 BCG9842_B3857 1368122 1369396 + proton/glutamate symporter family protein identified by match to protein family HMM PF00375 gene gene1426 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3857 BCG9842_B3858 BCG9842_B3858 BCG9842_B3858 1366353 1367627 - cell wall endopeptidase%2C family M23/M37 identified by match to protein family HMM PF01551 gene gene1425 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3858 BCG9842_B3859 BCG9842_B3859 BCG9842_B3859 1366093 1366251 - conserved hypothetical protein gene gene1424 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3859 BCG9842_B3860 BCG9842_B3860 BCG9842_B3860 1364709 1366067 + sodium-dependent tryptophan transporter identified by match to protein family HMM PF00209 gene gene1423 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3860 BCG9842_B3861 BCG9842_B3861 BCG9842_B3861 1363673 1364287 + siroheme synthase%2C precorrin 2 oxidase and ferrochelatase domains identified by match to protein family HMM TIGR01470 gene gene1422 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3861 BCG9842_B3862 BCG9842_B3862 BCG9842_B3862 1362946 1363698 + cbiX domain protein identified by match to protein family HMM PF01903 gene gene1421 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3862 BCG9842_B3863 BCG9842_B3863 cysG cysG 1362168 1362944 + uroporphyrin-III C-methyltransferase identified by match to protein family HMM PF00590%3B match to protein family HMM TIGR01469 gene gene1420 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3863 BCG9842_B3864 BCG9842_B3864 BCG9842_B3864 1361883 1362083 + hypothetical protein identified by glimmer%3B putative gene gene1419 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3864 BCG9842_B3865 BCG9842_B3865 BCG9842_B3865 1360250 1361872 + putative sulfite reductase identified by match to protein family HMM PF01077%3B match to protein family HMM PF03460 gene gene1418 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3865 BCG9842_B3866 BCG9842_B3866 cysC cysC 1359546 1360157 + adenylylsulfate kinase identified by match to protein family HMM PF01583%3B match to protein family HMM TIGR00455 gene gene1417 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3866 BCG9842_B3867 BCG9842_B3867 sat sat 1358397 1359533 + sulfate adenylyltransferase identified by match to protein family HMM PF01747%3B match to protein family HMM TIGR00339 gene gene1416 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3867 BCG9842_B3868 BCG9842_B3868 cysH cysH 1357654 1358358 + phosphoadenylyl-sulfate reductase (thioredoxin) identified by match to protein family HMM PF01507%3B match to protein family HMM TIGR00434%3B match to protein family HMM TIGR02055 gene gene1415 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3868 BCG9842_B3869 BCG9842_B3869 BCG9842_B3869 1357423 1357566 + conserved hypothetical protein gene gene1414 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3869 BCG9842_B3871 BCG9842_B3871 lysA lysA 1355811 1357127 + diaminopimelate decarboxylase identified by match to protein family HMM PF00278%3B match to protein family HMM PF02784%3B match to protein family HMM TIGR01048 gene gene1413 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3871 BCG9842_B3873 BCG9842_B3873 BCG9842_B3873 1354964 1355359 + group-specific protein gene gene1412 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3873 BCG9842_B3874 BCG9842_B3874 BCG9842_B3874 1352824 1354710 - sulfatase identified by match to protein family HMM PF00884 gene gene1411 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3874 BCG9842_B3875 BCG9842_B3875 BCG9842_B3875 1351934 1352635 - putative CDP-diacylglycerol--serine O-phosphatidyltransferase identified by match to protein family HMM PF01066%3B match to protein family HMM TIGR00473 gene gene1410 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3875 BCG9842_B3876 BCG9842_B3876 BCG9842_B3876 1350933 1351904 + D-isomer specific 2-hydroxyacid dehydrogenase family protein identified by match to protein family HMM PF00389%3B match to protein family HMM PF02826 gene gene1409 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3876 BCG9842_B3877 BCG9842_B3877 BCG9842_B3877 1350621 1350788 + hypothetical protein identified by glimmer%3B putative gene gene1408 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3877 BCG9842_B3878 BCG9842_B3878 BCG9842_B3878 1349536 1350552 + putative histidinol phosphatase identified by match to protein family HMM PF02811%3B match to protein family HMM TIGR01856 gene gene1407 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3878 BCG9842_B3879 BCG9842_B3879 hisI hisI 1349200 1349523 + phosphoribosyl-ATP pyrophosphohydrolase an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF01503%3B match to protein family HMM PF03819%3B match to protein family HMM TIGR03188 gene gene1406 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3879 BCG9842_B3880 BCG9842_B3880 hisE hisE 1348883 1349188 + phosphoribosyl-ATP pyrophosphatase an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF01502 gene gene1405 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3880 BCG9842_B3881 BCG9842_B3881 hisF hisF 1348128 1348886 + imidazoleglycerol phosphate synthase%2C cyclase subunit identified by match to protein family HMM PF00977%3B match to protein family HMM TIGR00735 gene gene1404 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3881 BCG9842_B3882 BCG9842_B3882 hisA hisA 1347415 1348134 + 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase identified by match to protein family HMM PF00977%3B match to protein family HMM TIGR00007 gene gene1403 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3882 BCG9842_B3883 BCG9842_B3883 hisH hisH 1346813 1347442 + imidazole glycerol phosphate synthase%2C glutamine amidotransferase identified by match to protein family HMM PF00117%3B match to protein family HMM PF07685%3B match to protein family HMM TIGR01855 gene gene1402 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3883 BCG9842_B3884 BCG9842_B3884 hisB hisB 1346228 1346812 + imidazoleglycerol-phosphate dehydratase identified by match to protein family HMM PF00475 gene gene1401 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3884 BCG9842_B3885 BCG9842_B3885 hisD hisD 1344939 1346228 + histidinol dehydrogenase identified by match to protein family HMM PF00815%3B match to protein family HMM TIGR00069 gene gene1400 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3885 BCG9842_B3886 BCG9842_B3886 hisG hisG 1344292 1344927 + ATP phosphoribosyltransferase identified by match to protein family HMM PF01634%3B match to protein family HMM TIGR00070 gene gene1399 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3886 BCG9842_B3887 BCG9842_B3887 hisZ hisZ 1343054 1344316 + ATP phosphoribosyltransferase%2C regulatory subunit identified by match to protein family HMM PF00587%3B match to protein family HMM TIGR00443 gene gene1398 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3887 BCG9842_B3888 BCG9842_B3888 leuD leuD 1342163 1342744 + 3-isopropylmalate dehydratase%2C small subunit identified by match to protein family HMM PF00694%3B match to protein family HMM TIGR00171 gene gene1397 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3888 BCG9842_B3889 BCG9842_B3889 leuC leuC 1340791 1342185 + 3-isopropylmalate dehydratase%2C large subunit identified by match to protein family HMM PF00330%3B match to protein family HMM TIGR00170 gene gene1396 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3889 BCG9842_B3890 BCG9842_B3890 leuB leuB 1339727 1340791 + 3-isopropylmalate dehydrogenase identified by match to protein family HMM PF00180%3B match to protein family HMM TIGR00169 gene gene1395 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3890 BCG9842_B3891 BCG9842_B3891 leuA leuA 1338147 1339649 + 2-isopropylmalate synthase identified by match to protein family HMM PF00682%3B match to protein family HMM PF08502%3B match to protein family HMM TIGR00973 gene gene1394 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3891 BCG9842_B3892 BCG9842_B3892 ilvC1 ilvC1 1337117 1338127 + ketol-acid reductoisomerase identified by match to protein family HMM PF01450%3B match to protein family HMM PF02629%3B match to protein family HMM PF07991%3B match to protein family HMM TIGR00465 gene gene1393 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3892 BCG9842_B3893 BCG9842_B3893 ilvN ilvN 1336581 1337090 + acetolactate synthase%2C small subunit identified by match to protein family HMM PF01842%3B match to protein family HMM TIGR00119 gene gene1392 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3893 BCG9842_B3894 BCG9842_B3894 ilvB ilvB 1334884 1336584 + acetolactate synthase%2C large subunit%2C biosynthetic type identified by match to protein family HMM PF00205%3B match to protein family HMM PF02775%3B match to protein family HMM PF02776%3B match to protein family HMM TIGR00118 gene gene1391 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3894 BCG9842_B3895 BCG9842_B3895 ilvE1 ilvE1 1333670 1334566 + branched-chain amino acid aminotransferase identified by match to protein family HMM PF01063%3B match to protein family HMM TIGR01122 gene gene1390 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3895 BCG9842_B3896 BCG9842_B3896 BCG9842_B3896 1333016 1333255 - hypothetical protein identified by glimmer%3B putative gene gene1389 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3896 BCG9842_B3897 BCG9842_B3897 BCG9842_B3897 1332690 1332929 - conserved hypothetical protein identified by match to protein family HMM PF03698 gene gene1388 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3897 BCG9842_B3898 BCG9842_B3898 BCG9842_B3898 1332224 1332337 + hypothetical protein identified by glimmer%3B putative gene gene1387 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3898 BCG9842_B3899 BCG9842_B3899 BCG9842_B3899 1331672 1332139 + conserved hypothetical protein identified by match to protein family HMM PF09579%3B match to protein family HMM TIGR02874 gene gene1386 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3899 BCG9842_B3900 BCG9842_B3900 BCG9842_B3900 1331109 1331483 - conserved hypothetical protein gene gene1385 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3900 BCG9842_B3901 BCG9842_B3901 BCG9842_B3901 1329730 1331073 + potassium uptake protein%2C TrkH family identified by match to protein family HMM PF02386%3B match to protein family HMM TIGR00933 gene gene1384 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3901 BCG9842_B3902 BCG9842_B3902 BCG9842_B3902 1327309 1328544 - proton/glutamate symporter family protein identified by match to protein family HMM PF00375 gene gene1383 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3902 BCG9842_B3903 BCG9842_B3903 BCG9842_B3903 1327131 1327286 + hypothetical protein identified by glimmer%3B putative gene gene1382 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3903 BCG9842_B3904 BCG9842_B3904 BCG9842_B3904 1326556 1326975 + transcriptional regulator%2C MarR family identified by match to protein family HMM PF01047 gene gene1381 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3904 BCG9842_B3905 BCG9842_B3905 BCG9842_B3905 1326215 1326394 - hypothetical protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by glimmer%3B putative gene gene1380 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3905 BCG9842_B3906 BCG9842_B3906 BCG9842_B3906 1325964 1326140 - group-specific protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift gene gene1379 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3906 BCG9842_B3907 BCG9842_B3907 BCG9842_B3907 1325343 1325897 - conserved hypothetical protein gene gene1378 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3907 BCG9842_B3908 BCG9842_B3908 bacA2 bacA2 1324521 1325312 + bacitracin resistance protein identified by match to protein family HMM PF02673%3B match to protein family HMM TIGR00753 gene gene1377 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3908 BCG9842_B3909 BCG9842_B3909 BCG9842_B3909 1322976 1324334 - MATE efflux family protein identified by match to protein family HMM PF01554%3B match to protein family HMM TIGR00797 gene gene1376 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3909 BCG9842_B3910 BCG9842_B3910 BCG9842_B3910 1322726 1322899 - hypothetical protein identified by glimmer%3B putative gene gene1375 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3910 BCG9842_B3911 BCG9842_B3911 BCG9842_B3911 1322559 1322708 - hypothetical protein identified by glimmer%3B putative gene gene1374 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3911 BCG9842_B3912 BCG9842_B3912 BCG9842_B3912 1321959 1322477 + transcriptional regulator%2C Bla/Mec family gene gene1373 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3912 BCG9842_B3913 BCG9842_B3913 BCG9842_B3913 1320973 1321875 - aminoglycoside phophotransferase family protein identified by match to protein family HMM PF01636 gene gene1372 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3913 BCG9842_B3914 BCG9842_B3914 BCG9842_B3914 1320809 1320970 + hypothetical protein identified by glimmer%3B putative gene gene1371 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3914 BCG9842_B3915 BCG9842_B3915 BCG9842_B3915 1319784 1320557 + hypothetical protein identified by glimmer%3B putative gene gene1370 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3915 BCG9842_B3916 BCG9842_B3916 BCG9842_B3916 1319313 1319759 + flavodoxin identified by match to protein family HMM PF00258%3B match to protein family HMM TIGR01753 gene gene1369 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3916 BCG9842_B3917 BCG9842_B3917 BCG9842_B3917 1319144 1319320 + hypothetical protein identified by glimmer%3B putative gene gene1368 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3917 BCG9842_B3918 BCG9842_B3918 amaA amaA 1317750 1318919 + aminoacylase identified by match to protein family HMM PF01546%3B match to protein family HMM PF07687%3B match to protein family HMM TIGR01891 gene gene1367 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3918 BCG9842_B3919 BCG9842_B3919 BCG9842_B3919 1317266 1317412 - conserved hypothetical protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift gene gene1366 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3919 BCG9842_B3920 BCG9842_B3920 dltA dltA 1315739 1317253 - D-alanine--poly(phosphoribitol) ligase%2C subunit 1 identified by match to protein family HMM PF00501%3B match to protein family HMM TIGR01733%3B match to protein family HMM TIGR01734 gene gene1365 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3920 BCG9842_B3921 BCG9842_B3921 dltB dltB 1314567 1315742 - D-alanyl-lipoteichoic acid biosynthesis protein DltB identified by match to protein family HMM PF03062 gene gene1364 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3921 BCG9842_B3922 BCG9842_B3922 dltC dltC 1314259 1314498 - D-alanine--poly(phosphoribitol) ligase%2C subunit 2 identified by match to protein family HMM TIGR01688 gene gene1363 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3922 BCG9842_B3923 BCG9842_B3923 dltD dltD 1313087 1314262 - D-alanyl-lipoteichoic acid biosynthesis protein DltD identified by match to protein family HMM PF04914%3B match to protein family HMM PF04915%3B match to protein family HMM PF04918 gene gene1362 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3923 BCG9842_B3924 BCG9842_B3924 BCG9842_B3924 1311974 1313065 + nitropropane dioxygenase identified by match to protein family HMM PF03060 gene gene1361 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3924 BCG9842_B3925 BCG9842_B3925 BCG9842_B3925 1310941 1311861 - conserved hypothetical protein identified by match to protein family HMM PF02016 gene gene1360 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3925 BCG9842_B3926 BCG9842_B3926 BCG9842_B3926 1310515 1310913 + conserved domain protein gene gene1359 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3926 BCG9842_B3927 BCG9842_B3927 BCG9842_B3927 1309875 1310429 + isochorismatase family protein identified by match to protein family HMM PF00857 gene gene1358 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3927 BCG9842_B3928 BCG9842_B3928 BCG9842_B3928 1309451 1309864 + conserved hypothetical protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a premature stop gene gene1357 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3928 BCG9842_B3929 BCG9842_B3929 BCG9842_B3929 1308875 1309327 - transcriptional regulator%2C AsnC family identified by match to protein family HMM PF01037 gene gene1356 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3929 BCG9842_B3930 BCG9842_B3930 BCG9842_B3930 1308592 1308774 - hypothetical protein identified by glimmer%3B putative gene gene1355 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3930 BCG9842_B3931 BCG9842_B3931 BCG9842_B3931 1307621 1308562 + transcriptional regulator%2C AbrB family identified by match to protein family HMM PF02517 gene gene1354 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3931 BCG9842_B3932 BCG9842_B3932 BCG9842_B3932 1306525 1307301 + putative ABC transporter%2C permease protein gene gene1353 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3932 BCG9842_B3933 BCG9842_B3933 BCG9842_B3933 1305623 1306525 + ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005 gene gene1352 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3933 BCG9842_B3934 BCG9842_B3934 BCG9842_B3934 1304817 1305608 + ABC transporter permease protein gene gene1351 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3934 BCG9842_B3935 BCG9842_B3935 BCG9842_B3935 1304122 1304820 + ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005 gene gene1350 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3935 BCG9842_B3936 BCG9842_B3936 BCG9842_B3936 1303745 1304125 + transcriptional regulator%2C GntR family identified by match to protein family HMM PF00392 gene gene1349 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3936 BCG9842_B3937 BCG9842_B3937 nrdF nrdF 1302561 1303529 + ribonucleoside-diphosphate reductase%2C beta subunit identified by match to protein family HMM PF00268 gene gene1348 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3937 BCG9842_B3938 BCG9842_B3938 BCG9842_B3938 1300431 1302479 + ribonucleoside-diphosphate reductase%2C alpha subunit identified by match to protein family HMM PF00317%3B match to protein family HMM PF02867%3B match to protein family HMM TIGR02506 gene gene1347 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3938 BCG9842_B3939 BCG9842_B3939 nrdI nrdI 1300049 1300408 + nrdI protein identified by match to protein family HMM PF07972%3B match to protein family HMM TIGR00333 gene gene1346 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3939 BCG9842_B3940 BCG9842_B3940 BCG9842_B3940 1299254 1299571 + hypothetical protein identified by glimmer%3B putative gene gene1345 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3940 BCG9842_B3941 BCG9842_B3941 BCG9842_B3941 1298960 1299154 + conserved hypothetical protein gene gene1344 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3941 BCG9842_B3942 BCG9842_B3942 BCG9842_B3942 1298048 1298626 - acetyltransferase%2C GNAT family identified by match to protein family HMM PF00583 gene gene1343 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3942 BCG9842_B3943 BCG9842_B3943 BCG9842_B3943 1297410 1298012 + conserved hypothetical protein identified by match to protein family HMM PF00300 gene gene1342 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3943 BCG9842_B3944 BCG9842_B3944 BCG9842_B3944 1297163 1297321 + hypothetical protein identified by glimmer%3B putative gene gene1341 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3944 BCG9842_B3945 BCG9842_B3945 BCG9842_B3945 1296721 1296906 - conserved domain protein gene gene1340 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3945 BCG9842_B3946 BCG9842_B3946 queF queF 1296175 1296672 + 7-cyano-7-deazaguanine reductase identified by match to protein family HMM PF01227%3B match to protein family HMM TIGR03139 gene gene1339 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3946 BCG9842_B3947 BCG9842_B3947 BCG9842_B3947 1295440 1296156 + radical SAM domain protein identified by match to protein family HMM PF04055%3B match to protein family HMM TIGR03365 gene gene1338 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3947 BCG9842_B3948 BCG9842_B3948 BCG9842_B3948 1294956 1295447 + putative 6-pyruvoyl tetrahydrobiopterin synthase identified by match to protein family HMM PF01242%3B match to protein family HMM TIGR03367 gene gene1337 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3948 BCG9842_B3949 BCG9842_B3949 BCG9842_B3949 1294294 1294956 + exsB protein identified by match to protein family HMM PF06508%3B match to protein family HMM TIGR00364 gene gene1336 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3949 BCG9842_B3951 BCG9842_B3951 kinB1 kinB1 1292742 1293950 - sporulation kinase B identified by match to protein family HMM PF00512%3B match to protein family HMM PF02518%3B match to protein family HMM PF07694 gene gene1335 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3951 BCG9842_B3952 BCG9842_B3952 BCG9842_B3952 1292614 1292730 + hypothetical protein identified by glimmer%3B putative gene gene1334 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3952 BCG9842_B3953 BCG9842_B3953 BCG9842_B3953 1292493 1292621 + hypothetical protein identified by glimmer%3B putative gene gene1333 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3953 BCG9842_B3954 BCG9842_B3954 BCG9842_B3954 1291979 1292512 + conserved hypothetical protein gene gene1332 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3954 BCG9842_B3955 BCG9842_B3955 BCG9842_B3955 1290147 1291841 + putative oligoendopeptidase F identified by match to protein family HMM PF01432%3B match to protein family HMM TIGR02289 gene gene1331 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3955 BCG9842_B3956 BCG9842_B3956 BCG9842_B3956 1289541 1289987 + transcriptional regulator%2C MarR family identified by match to protein family HMM PF01047 gene gene1330 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3956 BCG9842_B3957 BCG9842_B3957 BCG9842_B3957 1287849 1289345 - sensor histidine kinase KinD identified by match to protein family HMM PF00512%3B match to protein family HMM PF02518 gene gene1329 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3957 BCG9842_B3958 BCG9842_B3958 BCG9842_B3958 1287538 1287819 + stage 0 sporulation regulatory protein identified by match to protein family HMM PF09388 gene gene1328 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3958 BCG9842_B3959 BCG9842_B3959 BCG9842_B3959 1286287 1287057 - conserved hypothetical protein identified by match to protein family HMM PF04748 gene gene1327 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3959 BCG9842_B3960 BCG9842_B3960 BCG9842_B3960 1285599 1286222 + CBS domain protein identified by match to protein family HMM PF00571 gene gene1326 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3960 BCG9842_B3961 BCG9842_B3961 BCG9842_B3961 1284843 1285472 + methylthioribulose-1-phosphate dehydratase identified by match to protein family HMM PF00596 gene gene1325 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3961 BCG9842_B3962 BCG9842_B3962 BCG9842_B3962 1282156 1284438 + putative internalin identified by match to protein family HMM PF00395%3B match to protein family HMM PF00560%3B match to protein family HMM PF05031 gene gene1324 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3962 BCG9842_B3963 BCG9842_B3963 BCG9842_B3963 1281887 1282006 + hypothetical protein identified by glimmer%3B putative gene gene1323 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3963 BCG9842_B3964 BCG9842_B3964 BCG9842_B3964 1280935 1281717 + transcriptional regulator%2C DeoR family identified by match to protein family HMM PF00455%3B match to protein family HMM PF08220%3B match to protein family HMM PF08279 gene gene1322 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3964 BCG9842_B3965 BCG9842_B3965 BCG9842_B3965 1279710 1280894 + conserved hypothetical protein identified by match to protein family HMM PF03435 gene gene1321 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3965 BCG9842_B3966 BCG9842_B3966 BCG9842_B3966 1278616 1279713 + aminotransferase%2C class V identified by match to protein family HMM PF00266%3B match to protein family HMM TIGR02326%3B match to protein family HMM TIGR03301 gene gene1320 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3966 BCG9842_B3967 BCG9842_B3967 phnX phnX 1277806 1278600 + phosphonoacetaldehyde phosphonohydrolase identified by match to protein family HMM PF00702%3B match to protein family HMM TIGR01422%3B match to protein family HMM TIGR01549 gene gene1319 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3967 BCG9842_B3968 BCG9842_B3968 BCG9842_B3968 1276027 1277784 + putative iron compound ABC transporter%2C permease protein identified by match to protein family HMM PF00528%3B match to protein family HMM TIGR03262 gene gene1318 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3968 BCG9842_B3969 BCG9842_B3969 BCG9842_B3969 1275025 1276026 + ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005%3B match to protein family HMM TIGR03265 gene gene1317 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3969 BCG9842_B3970 BCG9842_B3970 BCG9842_B3970 1273929 1275005 + putative iron compound ABC transporter%2C iron compound-binding protein identified by match to protein family HMM PF01547%3B match to protein family HMM TIGR03261 gene gene1316 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3970 BCG9842_B3971 BCG9842_B3971 BCG9842_B3971 1273549 1273701 + conserved hypothetical protein gene gene1315 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3971 BCG9842_B3972 BCG9842_B3972 BCG9842_B3972 1273065 1273400 - hypothetical protein identified by glimmer%3B putative gene gene1314 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3972 BCG9842_B3973 BCG9842_B3973 BCG9842_B3973 1271677 1273026 + sodium transporter family protein identified by match to protein family HMM PF02386 gene gene1313 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3973 BCG9842_B3974 BCG9842_B3974 BCG9842_B3974 1270460 1271653 + conserved hypothetical protein identified by match to protein family HMM PF01266 gene gene1312 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3974 BCG9842_B3975 BCG9842_B3975 phaC phaC 1269279 1270364 + poly(R)-hydroxyalkanoic acid synthase%2C class III%2C PhaC subunit identified by match to protein family HMM PF00561%3B match to protein family HMM TIGR01836 gene gene1311 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3975 BCG9842_B3976 BCG9842_B3976 phbB phbB 1268453 1269196 + acetoacetyl-CoA reductase identified by match to protein family HMM PF00106%3B match to protein family HMM PF01370%3B match to protein family HMM PF08659%3B match to protein family HMM TIGR01829 gene gene1310 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3976 BCG9842_B3977 BCG9842_B3977 BCG9842_B3977 1267821 1268303 + phaR protein identified by match to protein family HMM TIGR02132 gene gene1309 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3977 BCG9842_B3978 BCG9842_B3978 BCG9842_B3978 1267170 1267622 - transcriptional regulator%2C PadR family identified by match to protein family HMM PF03551%3B match to protein family HMM TIGR02719 gene gene1308 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3978 BCG9842_B3979 BCG9842_B3979 BCG9842_B3979 1266603 1267127 - phaP protein identified by match to protein family HMM PF09602%3B match to protein family HMM TIGR02131 gene gene1307 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3979 BCG9842_B3980 BCG9842_B3980 BCG9842_B3980 1266058 1266501 - maoC family protein identified by match to protein family HMM PF01575 gene gene1306 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3980 BCG9842_B3981 BCG9842_B3981 BCG9842_B3981 1265725 1265910 - small%2C acid-soluble spore protein%2C alpha/beta family identified by match to protein family HMM PF00269 gene gene1305 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3981 BCG9842_B3982 BCG9842_B3982 BCG9842_B3982 1264291 1265610 - potassium uptake protein%2C TrkH family identified by match to protein family HMM PF02386%3B match to protein family HMM TIGR00933 gene gene1304 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3982 BCG9842_B3984 BCG9842_B3984 BCG9842_B3984 1263202 1263996 - membrane protein%2C TerC family identified by match to protein family HMM PF03741 gene gene1303 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3984 BCG9842_B3985 BCG9842_B3985 BCG9842_B3985 1262148 1262999 - formate/nitrite transporter family protein identified by match to protein family HMM PF01226 gene gene1302 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3985 BCG9842_B3986 BCG9842_B3986 BCG9842_B3986 1261809 1262120 + conserved hypothetical protein gene gene1301 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3986 BCG9842_B3987 BCG9842_B3987 comC comC 1261072 1261794 + late competence protein comC identified by match to protein family HMM PF01478%3B match to protein family HMM PF06750 gene gene1300 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3987 BCG9842_B3988 BCG9842_B3988 BCG9842_B3988 1260248 1260958 + ykgG family protein identified by match to protein family HMM PF02589 gene gene1299 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3988 BCG9842_B3989 BCG9842_B3989 BCG9842_B3989 1258827 1260248 + iron-sulfur cluster-binding protein identified by match to protein family HMM PF02589%3B match to protein family HMM TIGR00273 gene gene1298 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3989 BCG9842_B3990 BCG9842_B3990 BCG9842_B3990 1258091 1258810 + conserved hypothetical protein identified by match to protein family HMM PF02754 gene gene1297 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3990 BCG9842_B3991 BCG9842_B3991 BCG9842_B3991 1257266 1257922 + transcriptional regulator%2C GntR family identified by match to protein family HMM PF00392%3B match to protein family HMM PF07729 gene gene1296 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3991 BCG9842_B3992 BCG9842_B3992 BCG9842_B3992 1255450 1256850 + sensor histidine kinase identified by match to protein family HMM PF00512%3B match to protein family HMM PF00672%3B match to protein family HMM PF02518 gene gene1295 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3992 BCG9842_B3993 BCG9842_B3993 BCG9842_B3993 1254775 1255446 + DNA-binding response regulator identified by match to protein family HMM PF00072%3B match to protein family HMM PF00486 gene gene1294 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3993 BCG9842_B3994 BCG9842_B3994 BCG9842_B3994 1253808 1254782 + putative lipoprotein gene gene1293 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3994 BCG9842_B3995 BCG9842_B3995 BCG9842_B3995 1252556 1253671 - putative carbohydrate diacid regulator identified by match to protein family HMM PF05651 gene gene1292 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3995 BCG9842_B3996 BCG9842_B3996 glcD glcD 1251026 1252438 - glycolate oxidase%2C subunit GlcD identified by match to protein family HMM PF01565%3B match to protein family HMM PF02913%3B match to protein family HMM TIGR00387 gene gene1291 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3996 BCG9842_B3997 BCG9842_B3997 BCG9842_B3997 1249701 1251029 - glycolate oxidase iron-sulfur subunit identified by match to protein family HMM PF02754 gene gene1290 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3997 BCG9842_B3998 BCG9842_B3998 BCG9842_B3998 1248434 1249246 - conserved hypothetical protein identified by match to protein family HMM PF00188%3B match to protein family HMM TIGR02909 gene gene1289 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3998 BCG9842_B3999 BCG9842_B3999 BCG9842_B3999 1247788 1248393 + putative membrane protein identified by match to protein family HMM PF07853 gene gene1288 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B3999 BCG9842_B4000 BCG9842_B4000 BCG9842_B4000 1246773 1247696 + ribosomal large subunit pseudouridine synthase%2C RluA family identified by match to protein family HMM PF00849%3B match to protein family HMM TIGR00005 gene gene1287 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4000 BCG9842_B4001 BCG9842_B4001 BCG9842_B4001 1246256 1246672 + conserved hypothetical protein gene gene1286 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4001 BCG9842_B4002 BCG9842_B4002 BCG9842_B4002 1243961 1246153 + putative transporter gene gene1285 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4002 BCG9842_B4003 BCG9842_B4003 BCG9842_B4003 1243202 1243849 + PAP2 family protein identified by match to protein family HMM PF01569 gene gene1284 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4003 BCG9842_B4004 BCG9842_B4004 potD potD 1242093 1243142 + spermidine/putrescine ABC transporter%2C spermidine/putrescine-binding protein identified by match to protein family HMM PF01547 gene gene1283 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4004 BCG9842_B4005 BCG9842_B4005 potC potC 1241254 1242054 + spermidine/putrescine ABC transporter%2C permease protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts%3B identified by match to protein family HMM PF00528 gene gene1282 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4005 BCG9842_B4006 BCG9842_B4006 potB potB 1240399 1241247 + spermidine/putrescine ABC transporter%2C permease protein identified by match to protein family HMM PF00528 gene gene1281 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4006 BCG9842_B4007 BCG9842_B4007 potA potA 1239419 1240402 + spermidine/putrescine ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005%3B match to protein family HMM PF08402%3B match to protein family HMM TIGR01187 gene gene1280 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4007 BCG9842_B4008 BCG9842_B4008 BCG9842_B4008 1237812 1239179 + aldehyde dehydrogenase (NAD) family protein identified by match to protein family HMM PF00171 gene gene1279 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4008 BCG9842_B4009 BCG9842_B4009 BCG9842_B4009 1235253 1237640 + immune inhibitor A metalloprotease InhA1 identified by match to protein family HMM PF05547%3B match to protein family HMM TIGR03296 gene gene1278 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4009 BCG9842_B4010 BCG9842_B4010 BCG9842_B4010 1234776 1234910 - SinI protein identified by match to protein family HMM PF08671 gene gene1277 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4010 BCG9842_B4011 BCG9842_B4011 sinR sinR 1234373 1234696 - transcriptional regulator SinR identified by match to protein family HMM PF01381%3B match to protein family HMM PF08671 gene gene1276 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4011 BCG9842_B4012 BCG9842_B4012 calY calY 1233707 1234300 + camelysin gene gene1275 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4012 BCG9842_B4013 BCG9842_B4013 BCG9842_B4013 1232585 1233319 + conserved hypothetical protein gene gene1274 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4013 BCG9842_B4014 BCG9842_B4014 BCG9842_B4014 1231863 1232450 + spore coat-associated protein N gene gene1273 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4014 BCG9842_B4015 BCG9842_B4015 sipW sipW 1231233 1231802 + signal peptidase I identified by match to protein family HMM PF00717%3B match to protein family HMM TIGR02228 gene gene1272 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4015 BCG9842_B4016 BCG9842_B4016 BCG9842_B4016 1229752 1231038 + D-alanyl-D-alanine carboxypeptidase family protein identified by match to protein family HMM PF00768 gene gene1271 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4016 BCG9842_B4017 BCG9842_B4017 BCG9842_B4017 1229372 1229599 + hypothetical protein identified by glimmer%3B putative gene gene1270 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4017 BCG9842_B4018 BCG9842_B4018 BCG9842_B4018 1228486 1228755 - methyltransferase gene gene1269 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4018 BCG9842_B4019 BCG9842_B4019 BCG9842_B4019 1228213 1228428 - conserved domain protein gene gene1268 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4019 BCG9842_B4020 BCG9842_B4020 BCG9842_B4020 1227139 1227606 - conserved hypothetical protein gene gene1267 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4020 BCG9842_B4021 BCG9842_B4021 BCG9842_B4021 1226793 1226868 - tRNA-Val tRNA gene1266 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4021 BCG9842_B4022 BCG9842_B4022 BCG9842_B4022 1225240 1226481 + ABC transporter%2C permease component%2C putative sodium exporter gene gene1265 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4022 BCG9842_B4023 BCG9842_B4023 BCG9842_B4023 1224348 1225247 + ABC transporter ATP-binding protein identified by match to protein family HMM PF00005 gene gene1264 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4023 BCG9842_B4024 BCG9842_B4024 BCG9842_B4024 1224154 1224315 + oxidoreductase%2C short chain dehydrogenase family an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a premature stop gene gene1263 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4024 BCG9842_B4025 BCG9842_B4025 BCG9842_B4025 1222874 1223470 + group-specific protein gene gene1262 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4025 BCG9842_B4026 BCG9842_B4026 BCG9842_B4026 1222085 1222447 + conserved hypothetical protein gene gene1261 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4026 BCG9842_B4027 BCG9842_B4027 BCG9842_B4027 1221770 1221952 + hypothetical protein identified by glimmer%3B putative gene gene1260 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4027 BCG9842_B4028 BCG9842_B4028 BCG9842_B4028 1221364 1221612 + conserved hypothetical protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a premature stop gene gene1259 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4028 BCG9842_B4029 BCG9842_B4029 BCG9842_B4029 1221152 1221361 + DNA-binding protein identified by match to protein family HMM PF01381 gene gene1258 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4029 BCG9842_B4030 BCG9842_B4030 odhA odhA 1217461 1220328 - 2-oxoglutarate dehydrogenase%2C E1 component identified by match to protein family HMM PF00676%3B match to protein family HMM PF02779%3B match to protein family HMM TIGR00239 gene gene1257 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4030 BCG9842_B4031 BCG9842_B4031 odhB odhB 1216068 1217327 - 2-oxoglutarate dehydrogenase%2C E2 component%2C dihydrolipoamide succinyltransferase identified by match to protein family HMM PF00198%3B match to protein family HMM PF00364%3B match to protein family HMM PF02817%3B match to protein family HMM TIGR01347 gene gene1256 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4031 BCG9842_B4032 BCG9842_B4032 BCG9842_B4032 1214023 1215942 - hypothetical protein identified by glimmer%3B putative gene gene1255 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4032 BCG9842_B4033 BCG9842_B4033 BCG9842_B4033 1212077 1214026 - conserved domain protein identified by match to protein family HMM PF02624%3B match to protein family HMM TIGR03604 gene gene1254 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4033 BCG9842_B4034 BCG9842_B4034 BCG9842_B4034 1210520 1212061 - conserved hypothetical protein identified by match to protein family HMM TIGR03605 gene gene1253 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4034 BCG9842_B4035 BCG9842_B4035 BCG9842_B4035 1210079 1210489 + hypothetical protein identified by glimmer%3B putative gene gene1252 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4035 BCG9842_B4036 BCG9842_B4036 BCG9842_B4036 1209444 1209932 + acetyltransferase%2C GNAT family identified by match to protein family HMM PF00583 gene gene1251 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4036 BCG9842_B4037 BCG9842_B4037 BCG9842_B4037 1208010 1209344 + pyridine nucleotide-disulfide oxidoreductase%2C class I identified by match to protein family HMM PF00070%3B match to protein family HMM PF02852%3B match to protein family HMM PF07992 gene gene1250 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4037 BCG9842_B4038 BCG9842_B4038 BCG9842_B4038 1207380 1207811 - group-specific protein gene gene1249 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4038 BCG9842_B4039 BCG9842_B4039 BCG9842_B4039 1206101 1207336 + IG hypothetical 16680 gene gene1248 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4039 BCG9842_B4040 BCG9842_B4040 BCG9842_B4040 1205296 1206081 + hypothetical protein identified by glimmer%3B putative gene gene1247 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4040 BCG9842_B4041 BCG9842_B4041 BCG9842_B4041 1204266 1205099 - putative membrane protein gene gene1246 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4041 BCG9842_B4042 BCG9842_B4042 BCG9842_B4042 1203568 1204251 + conserved hypothetical protein gene gene1245 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4042 BCG9842_B4043 BCG9842_B4043 BCG9842_B4043 1202204 1203319 - transposase%2C OrfB family identified by match to protein family HMM PF07282%3B match to protein family HMM TIGR01766 gene gene1244 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4043 BCG9842_B4044 BCG9842_B4044 BCG9842_B4044 1200441 1201940 + putative L-lactate permease identified by match to protein family HMM PF02652 gene gene1243 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4044 BCG9842_B4045 BCG9842_B4045 BCG9842_B4045 1200317 1200436 + conserved hypothetical protein gene gene1242 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4045 BCG9842_B4046 BCG9842_B4046 BCG9842_B4046 1199967 1200326 + conserved domain protein gene gene1241 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4046 BCG9842_B4047 BCG9842_B4047 trpA trpA 1199117 1199893 + tryptophan synthase%2C alpha subunit identified by match to protein family HMM PF00290%3B match to protein family HMM TIGR00262 gene gene1240 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4047 BCG9842_B4048 BCG9842_B4048 trpB trpB 1197920 1199113 + tryptophan synthase%2C beta subunit identified by match to protein family HMM PF00291%3B match to protein family HMM TIGR00263 gene gene1239 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4048 BCG9842_B4049 BCG9842_B4049 trpF trpF 1197309 1197923 + N-(5'phosphoribosyl)anthranilate isomerase identified by match to protein family HMM PF00697 gene gene1238 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4049 BCG9842_B4050 BCG9842_B4050 BCG9842_B4050 1196551 1197312 + indole-3-glycerol phosphate synthase identified by match to protein family HMM PF00218 gene gene1237 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4050 BCG9842_B4051 BCG9842_B4051 trpD trpD 1195524 1196549 + anthranilate phosphoribosyltransferase identified by match to protein family HMM PF00591%3B match to protein family HMM PF02885%3B match to protein family HMM TIGR01245 gene gene1236 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4051 BCG9842_B4052 BCG9842_B4052 BCG9842_B4052 1194940 1195527 + anthranilate synthase%2C glutamine amidotransferase component identified by match to protein family HMM PF00117%3B match to protein family HMM TIGR00566 gene gene1235 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4052 BCG9842_B4053 BCG9842_B4053 trpE trpE 1193525 1194943 + anthranilate synthase component I identified by match to protein family HMM PF00425%3B match to protein family HMM PF04715%3B match to protein family HMM TIGR00564 gene gene1234 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4053 BCG9842_B4054 BCG9842_B4054 BCG9842_B4054 1193018 1193155 + hypothetical protein identified by glimmer%3B putative gene gene1233 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4054 BCG9842_B4055 BCG9842_B4055 BCG9842_B4055 1191013 1192491 - sodium/proline symporter family protein identified by match to protein family HMM PF00474%3B match to protein family HMM TIGR00813%3B match to protein family HMM TIGR02121 gene gene1232 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4055 BCG9842_B4056 BCG9842_B4056 BCG9842_B4056 1190451 1190849 - conserved domain protein gene gene1231 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4056 BCG9842_B4057 BCG9842_B4057 BCG9842_B4057 1190304 1190426 + putative lipoprotein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a premature stop gene gene1230 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4057 BCG9842_B4058 BCG9842_B4058 BCG9842_B4058 1190031 1190207 + conserved hypothetical protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a premature stop gene gene1229 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4058 BCG9842_B4059 BCG9842_B4059 BCG9842_B4059 1189043 1189954 + putative membrane protein identified by match to protein family HMM PF00892 gene gene1228 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4059 BCG9842_B4060 BCG9842_B4060 BCG9842_B4060 1188107 1188838 - conserved hypothetical protein identified by match to protein family HMM PF00756 gene gene1227 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4060 BCG9842_B4061 BCG9842_B4061 BCG9842_B4061 1187495 1188013 - conserved hypothetical protein identified by match to protein family HMM PF02834 gene gene1226 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4061 BCG9842_B4062 BCG9842_B4062 BCG9842_B4062 1187071 1187493 - acetyltransferase%2C GNAT family identified by match to protein family HMM PF00583 gene gene1225 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4062 BCG9842_B4063 BCG9842_B4063 BCG9842_B4063 1184904 1186970 - ATP-dependent DNA helicase%2C UvrD/REP family identified by match to protein family HMM PF00580 gene gene1224 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4063 BCG9842_B4064 BCG9842_B4064 cotZ2 cotZ2 1184291 1184761 - spore coat protein Z gene gene1223 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4064 BCG9842_B4065 BCG9842_B4065 BCG9842_B4065 1183620 1184123 - hypothetical protein identified by glimmer%3B putative gene gene1222 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4065 BCG9842_B4066 BCG9842_B4066 BCG9842_B4066 1183366 1183542 + hypothetical protein identified by glimmer%3B putative gene gene1221 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4066 BCG9842_B4067 BCG9842_B4067 BCG9842_B4067 1182896 1183255 + conserved hypothetical protein identified by match to protein family HMM PF07098 gene gene1220 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4067 BCG9842_B4068 BCG9842_B4068 BCG9842_B4068 1182306 1182770 - exosporium protein Y gene gene1219 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4068 BCG9842_B4069 BCG9842_B4069 BCG9842_B4069 1181721 1182257 + conserved hypothetical protein gene gene1218 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4069 BCG9842_B4070 BCG9842_B4070 fabI fabI 1180788 1181558 + enoyl-(acyl-carrier-protein) reductase gene gene1217 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4070 BCG9842_B4071 BCG9842_B4071 rfbD rfbD 1179966 1180679 + dTDP-4-dehydrorhamnose reductase identified by match to protein family HMM PF01073%3B match to protein family HMM PF01370%3B match to protein family HMM PF02719%3B match to protein family HMM PF04321%3B match to protein family HMM PF07993%3B match to protein family HMM TIGR01214 gene gene1216 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4071 BCG9842_B4072 BCG9842_B4072 rfbB rfbB 1178841 1179812 + dTDP-glucose 4%2C6-dehydratase identified by match to protein family HMM PF01073%3B match to protein family HMM PF01370%3B match to protein family HMM PF02719%3B match to protein family HMM PF04321%3B match to protein family HMM PF07993%3B match to protein family HMM TIGR01181 gene gene1214 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4072 BCG9842_B4073 BCG9842_B4073 rfbC rfbC 1178280 1178825 + dTDP-4-dehydrorhamnose 3%2C5-epimerase identified by match to protein family HMM PF00908%3B match to protein family HMM TIGR01221 gene gene1213 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4073 BCG9842_B4074 BCG9842_B4074 BCG9842_B4074 1177534 1178271 + putative glucose-1-phosphate thymidylyltransferase identified by match to protein family HMM PF00483 gene gene1212 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4074 BCG9842_B4075 BCG9842_B4075 BCG9842_B4075 1176839 1177519 + streptomycin biosynthesis StrF domain protein gene gene1211 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4075 BCG9842_B4076 BCG9842_B4076 BCG9842_B4076 1176138 1176824 + hypothetical protein identified by glimmer%3B putative gene gene1210 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4076 BCG9842_B4077 BCG9842_B4077 BCG9842_B4077 1175452 1176141 + conserved hypothetical protein identified by match to protein family HMM PF08241%3B match to protein family HMM PF08242 gene gene1209 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4077 BCG9842_B4078 BCG9842_B4078 BCG9842_B4078 1174143 1175240 + glycosyl transferase%2C group 2 family protein identified by match to protein family HMM PF00535 gene gene1208 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4078 BCG9842_B4079 BCG9842_B4079 BCG9842_B4079 1173033 1173977 - BclA protein identified by match to protein family HMM PF01391 gene gene1207 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4079 BCG9842_B4080 BCG9842_B4080 BCG9842_B4080 1172065 1172910 - macrocin O-methyltransferase identified by match to protein family HMM PF05711 gene gene1206 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4080 BCG9842_B4081 BCG9842_B4081 BCG9842_B4081 1171128 1171880 - methyltransferase identified by match to protein family HMM PF08241%3B match to protein family HMM PF08242 gene gene1205 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4081 BCG9842_B4082 BCG9842_B4082 BCG9842_B4082 1170188 1171114 - glycosyltransferase identified by match to protein family HMM PF00535 gene gene1204 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4082 BCG9842_B4083 BCG9842_B4083 BCG9842_B4083 1168909 1170069 - cell cycle protein%2C FtsW/RodA/SpoVE family identified by match to protein family HMM PF01098 gene gene1203 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4083 BCG9842_B4084 BCG9842_B4084 BCG9842_B4084 1168092 1168832 - Ser/Thr protein phosphatase family protein identified by match to protein family HMM PF00149 gene gene1202 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4084 BCG9842_B4085 BCG9842_B4085 BCG9842_B4085 1166567 1167955 - conserved hypothetical protein identified by match to protein family HMM PF05658 gene gene1201 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4085 BCG9842_B4086 BCG9842_B4086 BCG9842_B4086 1165691 1166518 + ribosomal large subunit pseudouridine synthase%2C RluA family identified by match to protein family HMM PF00849%3B match to protein family HMM TIGR00005 gene gene1200 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4086 BCG9842_B4087 BCG9842_B4087 BCG9842_B4087 1164813 1165610 + putative inorganic polyphosphate/ATP-NAD kinase identified by match to protein family HMM PF01513 gene gene1199 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4087 BCG9842_B4088 BCG9842_B4088 BCG9842_B4088 1164156 1164794 + conserved hypothetical protein identified by match to protein family HMM PF04607 gene gene1198 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4088 BCG9842_B4089 BCG9842_B4089 BCG9842_B4089 1163754 1164125 + conserved hypothetical protein gene gene1197 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4089 BCG9842_B4090 BCG9842_B4090 BCG9842_B4090 1163029 1163607 - conserved hypothetical protein identified by match to protein family HMM PF01928 gene gene1196 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4090 BCG9842_B4091 BCG9842_B4091 BCG9842_B4091 1162462 1162860 - protozoan/cyanobacterial globin family protein identified by match to protein family HMM PF01152 gene gene1195 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4091 BCG9842_B4092 BCG9842_B4092 BCG9842_B4092 1161569 1162462 - conserved hypothetical protein gene gene1194 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4092 BCG9842_B4093 BCG9842_B4093 BCG9842_B4093 1161166 1161339 - conserved hypothetical protein gene gene1193 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4093 BCG9842_B4094 BCG9842_B4094 pepF1 pepF1 1159208 1161034 + oligoendopeptidase F identified by match to protein family HMM PF01432%3B match to protein family HMM PF08439%3B match to protein family HMM TIGR00181 gene gene1192 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4094 BCG9842_B4095 BCG9842_B4095 BCG9842_B4095 1157912 1159156 + conserved hypothetical protein identified by match to protein family HMM PF06054 gene gene1191 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4095 BCG9842_B4096 BCG9842_B4096 cls2 cls2 1156287 1157831 + cardiolipin synthetase identified by match to protein family HMM PF00614 gene gene1190 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4096 BCG9842_B4097 BCG9842_B4097 mecA mecA 1155531 1156214 + negative regulator of competence MecA identified by match to protein family HMM PF05389 gene gene1189 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4097 BCG9842_B4098 BCG9842_B4098 BCG9842_B4098 1155285 1155425 - hypothetical protein identified by glimmer%3B putative gene gene1188 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4098 BCG9842_B4099 BCG9842_B4099 BCG9842_B4099 1154511 1155185 - putative membrane protein identified by match to protein family HMM PF03741 gene gene1187 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4099 BCG9842_B4100 BCG9842_B4100 BCG9842_B4100 1154066 1154461 + conserved hypothetical protein identified by match to protein family HMM PF03960%3B match to protein family HMM TIGR01617 gene gene1186 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4100 BCG9842_B4101 BCG9842_B4101 BCG9842_B4101 1153271 1153474 - hypothetical protein identified by glimmer%3B putative gene gene1185 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4101 BCG9842_B4102 BCG9842_B4102 BCG9842_B4102 1151597 1153243 + oligopeptide ABC transporter%2C oligopeptide-binding protein identified by match to protein family HMM PF00496 gene gene1184 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4102 BCG9842_B4103 BCG9842_B4103 BCG9842_B4103 1149803 1151194 - Na+ driven multidrug efflux pump identified by match to protein family HMM PF01554%3B match to protein family HMM TIGR00797 gene gene1183 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4103 BCG9842_B4104 BCG9842_B4104 BCG9842_B4104 1148810 1149745 + oligopeptide ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005%3B match to protein family HMM PF08352 gene gene1182 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4104 BCG9842_B4105 BCG9842_B4105 BCG9842_B4105 1147774 1148817 + oligopeptide ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005%3B match to protein family HMM PF08352%3B match to protein family HMM TIGR01727 gene gene1181 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4105 BCG9842_B4106 BCG9842_B4106 BCG9842_B4106 1146737 1147753 + oligopeptide ABC transporter%2C permease protein identified by match to protein family HMM PF00528 gene gene1180 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4106 BCG9842_B4107 BCG9842_B4107 BCG9842_B4107 1145811 1146740 + oligopeptide ABC transporter%2C permease protein identified by match to protein family HMM PF00528 gene gene1179 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4107 BCG9842_B4108 BCG9842_B4108 BCG9842_B4108 1144027 1145682 + oligopeptide-binding protein OppA identified by match to protein family HMM PF00496 gene gene1178 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4108 BCG9842_B4109 BCG9842_B4109 BCG9842_B4109 1143328 1143663 - hypothetical protein identified by glimmer%3B putative gene gene1177 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4109 BCG9842_B4110 BCG9842_B4110 trpS trpS 1141941 1142930 - tryptophanyl-tRNA synthetase identified by match to protein family HMM PF00579%3B match to protein family HMM TIGR00233 gene gene1176 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4110 BCG9842_B4111 BCG9842_B4111 BCG9842_B4111 1140917 1141663 + conserved hypothetical protein gene gene1175 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4111 BCG9842_B4112 BCG9842_B4112 BCG9842_B4112 1139985 1140773 + conserved hypothetical protein gene gene1174 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4112 BCG9842_B4113 BCG9842_B4113 fabF fabF 1138639 1139877 + 3-oxoacyl-(acyl-carrier-protein) synthase II identified by match to protein family HMM PF00109%3B match to protein family HMM PF02801%3B match to protein family HMM TIGR03150 gene gene1173 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4113 BCG9842_B4114 BCG9842_B4114 fabH fabH 1137675 1138607 + 3-oxoacyl-(acyl-carrier-protein) synthase III identified by match to protein family HMM PF08541%3B match to protein family HMM PF08545%3B match to protein family HMM TIGR00747 gene gene1172 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4114 BCG9842_B4115 BCG9842_B4115 BCG9842_B4115 1137267 1137443 + conserved hypothetical protein gene gene1171 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4115 BCG9842_B4116 BCG9842_B4116 BCG9842_B4116 1136340 1137212 + UDP-glucose 4-epimerase-like protein gene gene1170 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4116 BCG9842_B4117 BCG9842_B4117 BCG9842_B4117 1135576 1136310 + conserved hypothetical protein gene gene1169 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4117 BCG9842_B4118 BCG9842_B4118 BCG9842_B4118 1135237 1135419 - conserved hypothetical protein gene gene1168 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4118 BCG9842_B4119 BCG9842_B4119 clpB clpB 1132598 1135198 + ATP-dependent Clp protease%2C ATP-binding subunit ClpB identified by match to protein family HMM PF00004%3B match to protein family HMM PF02861%3B match to protein family HMM PF07724%3B match to protein family HMM PF07728%3B match to protein family HMM TIGR03346 gene gene1167 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4119 BCG9842_B4120 BCG9842_B4120 BCG9842_B4120 1132207 1132386 + conserved hypothetical protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift gene gene1166 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4120 BCG9842_B4121 BCG9842_B4121 BCG9842_B4121 1130907 1131716 - hydrolase%2C haloacid dehalogenase-like family identified by match to protein family HMM PF00702%3B match to protein family HMM PF05116%3B match to protein family HMM PF08282%3B match to protein family HMM TIGR00099%3B match to protein family HMM TIGR01484 gene gene1165 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4121 BCG9842_B4122 BCG9842_B4122 BCG9842_B4122 1130661 1130801 - conserved hypothetical protein gene gene1164 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4122 BCG9842_B4123 BCG9842_B4123 BCG9842_B4123 1130463 1130660 - conserved hypothetical protein gene gene1163 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4123 BCG9842_B4124 BCG9842_B4124 BCG9842_B4124 1129580 1130437 + putative membrane protein identified by match to protein family HMM PF02588 gene gene1162 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4124 BCG9842_B4125 BCG9842_B4125 BCG9842_B4125 1129348 1129479 - conserved hypothetical protein gene gene1161 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4125 BCG9842_B4126 BCG9842_B4126 prsA2 prsA2 1128361 1129218 - peptidylprolyl isomerase PrsA2 identified by match to protein family HMM PF00639 gene gene1160 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4126 BCG9842_B4127 BCG9842_B4127 BCG9842_B4127 1127452 1128306 + conserved hypothetical protein gene gene1159 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4127 BCG9842_B4128 BCG9842_B4128 BCG9842_B4128 1126730 1127221 - conserved hypothetical protein identified by match to protein family HMM PF04461 gene gene1158 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4128 BCG9842_B4129 BCG9842_B4129 BCG9842_B4129 1124981 1125877 + transcriptional regulator%2C XRE family identified by match to protein family HMM PF01381 gene gene1157 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4129 BCG9842_B4130 BCG9842_B4130 BCG9842_B4130 1123388 1124683 + alpha-amylase family protein identified by match to protein family HMM PF00128 gene gene1156 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4130 BCG9842_B4131 BCG9842_B4131 BCG9842_B4131 1121937 1123169 - ammonium transporter identified by match to protein family HMM PF00909%3B match to protein family HMM TIGR00836 gene gene1155 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4131 BCG9842_B4132 BCG9842_B4132 katB katB 1120206 1121672 + catalase identified by match to protein family HMM PF00199 gene gene1154 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4132 BCG9842_B4133 BCG9842_B4133 hemH2 hemH2 1119187 1120146 + ferrochelatase identified by match to protein family HMM PF00762%3B match to protein family HMM TIGR00109 gene gene1153 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4133 BCG9842_B4134 BCG9842_B4134 asnO1 asnO1 1117154 1119001 + asparagine synthetase%2C glutamine-hydrolyzing identified by match to protein family HMM PF00310%3B match to protein family HMM PF00733%3B match to protein family HMM TIGR01536 gene gene1152 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4134 BCG9842_B4135 BCG9842_B4135 BCG9842_B4135 1116360 1116914 - conserved hypothetical protein gene gene1151 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4135 BCG9842_B4136 BCG9842_B4136 BCG9842_B4136 1115792 1116157 + conserved hypothetical protein identified by match to protein family HMM PF07457 gene gene1150 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4136 BCG9842_B4137 BCG9842_B4137 rocD rocD 1114451 1115641 - ornithine aminotransferase identified by match to protein family HMM PF00202%3B match to protein family HMM TIGR01885 gene gene1149 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4137 BCG9842_B4138 BCG9842_B4138 BCG9842_B4138 1114108 1114242 + hypothetical protein identified by glimmer%3B putative gene gene1148 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4138 BCG9842_B4139 BCG9842_B4139 BCG9842_B4139 1113112 1114020 + fumarylacetoacetate hydrolase family protein identified by match to protein family HMM PF01557 gene gene1147 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4139 BCG9842_B4140 BCG9842_B4140 BCG9842_B4140 1112695 1112874 - conserved hypothetical protein identified by match to protein family HMM PF09388 gene gene1146 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4140 BCG9842_B4141 BCG9842_B4141 gerPA gerPA 1112377 1112598 - spore germination protein GerPA gene gene1145 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4141 BCG9842_B4142 BCG9842_B4142 gerPB gerPB 1112156 1112362 - spore germination protein GerPB gene gene1144 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4142 BCG9842_B4143 BCG9842_B4143 gerPC gerPC 1111474 1112088 - spore germination protein GerPC gene gene1143 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4143 BCG9842_B4144 BCG9842_B4144 gerPD gerPD 1111273 1111467 - spore germination protein GerPD gene gene1142 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4144 BCG9842_B4145 BCG9842_B4145 gerPE gerPE 1110871 1111257 - spore germination protein GerPE gene gene1141 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4145 BCG9842_B4146 BCG9842_B4146 gerPF1 gerPF1 1110613 1110828 - spore germination protein GerPF gene gene1140 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4146 BCG9842_B4147 BCG9842_B4147 BCG9842_B4147 1110188 1110475 + conserved domain protein identified by match to protein family HMM PF03118 gene gene1139 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4147 BCG9842_B4148 BCG9842_B4148 addA addA 1106450 1110175 + ATP-dependent nuclease%2C subunit A identified by match to protein family HMM PF00580%3B match to protein family HMM TIGR02785 gene gene1138 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4148 BCG9842_B4149 BCG9842_B4149 addB addB 1102938 1106453 + ATP-dependent nuclease%2C subunit B identified by match to protein family HMM TIGR02773 gene gene1137 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4149 BCG9842_B4150 BCG9842_B4150 sipT sipT 1102259 1102822 + signal peptidase I identified by match to protein family HMM PF00717%3B match to protein family HMM TIGR02227 gene gene1136 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4150 BCG9842_B4151 BCG9842_B4151 BCG9842_B4151 1101609 1102202 + conserved hypothetical protein identified by match to protein family HMM PF09335 gene gene1135 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4151 BCG9842_B4152 BCG9842_B4152 BCG9842_B4152 1100598 1101179 + putative competence transcription factor identified by match to protein family HMM PF06338 gene gene1134 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4152 BCG9842_B4153 BCG9842_B4153 BCG9842_B4153 1100129 1100314 - conserved domain protein gene gene1133 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4153 BCG9842_B4154 BCG9842_B4154 cspA1 cspA1 1099123 1099326 + cold shock protein CspA identified by match to protein family HMM PF00313 gene gene1132 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4154 BCG9842_B4155 BCG9842_B4155 BCG9842_B4155 1098345 1098839 - conserved hypothetical protein gene gene1131 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4155 BCG9842_B4156 BCG9842_B4156 BCG9842_B4156 1097534 1098325 - trifolitoxin immunity protein identified by match to protein family HMM PF01636 gene gene1130 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4156 BCG9842_B4157 BCG9842_B4157 aceA aceA 1096147 1097424 + isocitrate lyase identified by match to protein family HMM PF00463%3B match to protein family HMM TIGR01346 gene gene1129 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4157 BCG9842_B4158 BCG9842_B4158 aceB aceB 1094534 1096123 + malate synthase A identified by match to protein family HMM PF01274%3B match to protein family HMM TIGR01344 gene gene1128 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4158 BCG9842_B4159 BCG9842_B4159 BCG9842_B4159 1093651 1094313 + S-layer domain protein identified by match to protein family HMM PF00395 gene gene1127 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4159 BCG9842_B4160 BCG9842_B4160 BCG9842_B4160 1092753 1093409 + S-layer domain protein identified by match to protein family HMM PF00395 gene gene1126 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4160 BCG9842_B4161 BCG9842_B4161 BCG9842_B4161 1092298 1092471 + permease%2C drug/metabolite transporter superfamily an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift gene gene1125 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4161 BCG9842_B4162 BCG9842_B4162 BCG9842_B4162 1090384 1092111 + methyl-accepting chemotaxis protein identified by match to protein family HMM PF00015%3B match to protein family HMM PF00672 gene gene1124 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4162 BCG9842_B4163 BCG9842_B4163 BCG9842_B4163 1088981 1090249 + peptidase%2C M48 family identified by match to protein family HMM PF01435 gene gene1123 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4163 BCG9842_B4164 BCG9842_B4164 BCG9842_B4164 1088427 1088618 + hypothetical protein identified by glimmer%3B putative gene gene1122 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4164 BCG9842_B4165 BCG9842_B4165 BCG9842_B4165 1088060 1088287 + conserved hypothetical protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift gene gene1121 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4165 BCG9842_B4166 BCG9842_B4166 BCG9842_B4166 1087957 1088070 + group-specific protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift gene gene1120 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4166 BCG9842_B4167 BCG9842_B4167 BCG9842_B4167 1087107 1087955 + CAAX amino terminal protease family protein identified by match to protein family HMM PF02517 gene gene1119 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4167 BCG9842_B4168 BCG9842_B4168 BCG9842_B4168 1086262 1086966 - DNA-binding response regulator identified by match to protein family HMM PF00072%3B match to protein family HMM PF00486 gene gene1118 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4168 BCG9842_B4169 BCG9842_B4169 BCG9842_B4169 1084510 1086252 - sensor histidine kinase identified by match to protein family HMM PF00512%3B match to protein family HMM PF02518 gene gene1117 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4169 BCG9842_B4170 BCG9842_B4170 BCG9842_B4170 1083893 1084258 + conserved hypothetical protein identified by match to protein family HMM PF00903 gene gene1116 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4170 BCG9842_B4171 BCG9842_B4171 BCG9842_B4171 1082930 1083832 + transcriptional regulator%2C AraC family identified by match to protein family HMM PF00165%3B match to protein family HMM PF06445 gene gene1115 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4171 BCG9842_B4172 BCG9842_B4172 BCG9842_B4172 1082308 1082793 - RNA polymerase sigma-70 factor%2C ECF subfamily identified by match to protein family HMM PF04542%3B match to protein family HMM PF04545%3B match to protein family HMM PF08281%3B match to protein family HMM TIGR02937%3B match to protein family HMM TIGR02950 gene gene1114 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4172 BCG9842_B4173 BCG9842_B4173 BCG9842_B4173 1081178 1082302 - sigma-M negative effector gene gene1113 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4173 BCG9842_B4174 BCG9842_B4174 BCG9842_B4174 1080157 1081134 + HD domain protein identified by match to protein family HMM PF01966 gene gene1112 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4174 BCG9842_B4175 BCG9842_B4175 BCG9842_B4175 1078930 1080036 + Ser/Thr protein phosphatase family protein identified by match to protein family HMM PF00149 gene gene1111 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4175 BCG9842_B4176 BCG9842_B4176 BCG9842_B4176 1077866 1078783 + alpha/beta superfamily hydrolase gene gene1110 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4176 BCG9842_B4177 BCG9842_B4177 BCG9842_B4177 1077151 1077696 - transcriptional regulator%2C TetR family identified by match to protein family HMM PF00440 gene gene1109 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4177 BCG9842_B4178 BCG9842_B4178 BCG9842_B4178 1076540 1076767 + wall associated protein%2C putative an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift gene gene1108 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4178 BCG9842_B4179 BCG9842_B4179 BCG9842_B4179 1076052 1076531 + conserved hypothetical protein gene gene1107 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4179 BCG9842_B4180 BCG9842_B4180 BCG9842_B4180 1075855 1075974 - hypothetical protein identified by glimmer%3B putative gene gene1106 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4180 BCG9842_B4181 BCG9842_B4181 BCG9842_B4181 1075698 1075847 + hypothetical protein identified by glimmer%3B putative gene gene1105 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4181 BCG9842_B4182 BCG9842_B4182 BCG9842_B4182 1074810 1075397 - conserved hypothetical protein gene gene1104 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4182 BCG9842_B4183 BCG9842_B4183 BCG9842_B4183 1073100 1074632 + putative long-chain-fatty-acid--CoA ligase identified by match to protein family HMM PF00501 gene gene1103 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4183 BCG9842_B4184 BCG9842_B4184 BCG9842_B4184 1072510 1072938 + putative lipoprotein gene gene1102 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4184 BCG9842_B4185 BCG9842_B4185 BCG9842_B4185 1071349 1072338 + putative lipoate-protein ligase A identified by match to protein family HMM PF03099%3B match to protein family HMM TIGR00545 gene gene1101 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4185 BCG9842_B4186 BCG9842_B4186 BCG9842_B4186 1070605 1071339 + metallo-beta-lactamase family protein identified by match to protein family HMM PF00753 gene gene1100 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4186 BCG9842_B4187 BCG9842_B4187 BCG9842_B4187 1070296 1070424 - conserved hypothetical protein gene gene1099 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4187 BCG9842_B4188 BCG9842_B4188 BCG9842_B4188 1069240 1070256 + sugar-binding transcriptional regulator%2C LacI family identified by match to protein family HMM PF00356%3B match to protein family HMM PF00532 gene gene1098 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4188 BCG9842_B4189 BCG9842_B4189 BCG9842_B4189 1068536 1069045 + acetyltransferase%2C GNAT family identified by match to protein family HMM PF00583 gene gene1097 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4189 BCG9842_B4190 BCG9842_B4190 BCG9842_B4190 1068049 1068402 - hypothetical protein identified by glimmer%3B putative gene gene1096 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4190 BCG9842_B4191 BCG9842_B4191 BCG9842_B4191 1067717 1068022 + conserved hypothetical protein gene gene1095 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4191 BCG9842_B4192 BCG9842_B4192 BCG9842_B4192 1067467 1067682 + conserved domain protein gene gene1094 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4192 BCG9842_B4193 BCG9842_B4193 BCG9842_B4193 1063980 1067324 + phage infection protein identified by match to protein family HMM PF01061%3B match to protein family HMM TIGR03061%3B match to protein family HMM TIGR03062 gene gene1093 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4193 BCG9842_B4194 BCG9842_B4194 BCG9842_B4194 1063193 1063765 + transcriptional regulator%2C TetR family identified by match to protein family HMM PF00440 gene gene1092 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4194 BCG9842_B4195 BCG9842_B4195 BCG9842_B4195 1062864 1062989 + hypothetical protein identified by glimmer%3B putative gene gene1091 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4195 BCG9842_B4196 BCG9842_B4196 BCG9842_B4196 1062020 1062865 - conserved hypothetical protein gene gene1090 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4196 BCG9842_B4197 BCG9842_B4197 BCG9842_B4197 1061666 1061965 + group-specific protein gene gene1089 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4197 BCG9842_B4198 BCG9842_B4198 BCG9842_B4198 1059173 1061539 + endonuclease/exonuclease/phosphatase family identified by match to protein family HMM PF03372 gene gene1088 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4198 BCG9842_B4199 BCG9842_B4199 BCG9842_B4199 1057579 1058931 - hypothetical protein identified by glimmer%3B putative gene gene1087 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4199 BCG9842_B4200 BCG9842_B4200 hemY1 hemY1 1056106 1057527 + protoporphyrinogen oxidase identified by match to protein family HMM PF01593%3B match to protein family HMM TIGR00562 gene gene1086 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4200 BCG9842_B4201 BCG9842_B4201 hemH1 hemH1 1055151 1056086 + ferrochelatase identified by match to protein family HMM PF00762%3B match to protein family HMM TIGR00109 gene gene1085 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4201 BCG9842_B4202 BCG9842_B4202 hemE hemE 1054090 1055136 + uroporphyrinogen decarboxylase identified by match to protein family HMM PF01208%3B match to protein family HMM TIGR01464 gene gene1084 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4202 BCG9842_B4203 BCG9842_B4203 pbpF pbpF 1051795 1053912 + penicillin-binding protein 1 identified by match to protein family HMM PF00905%3B match to protein family HMM PF00912%3B match to protein family HMM TIGR02074 gene gene1083 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4203 BCG9842_B4204 BCG9842_B4204 BCG9842_B4204 1051170 1051667 - conserved hypothetical protein identified by match to protein family HMM PF03992 gene gene1082 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4204 BCG9842_B4205 BCG9842_B4205 BCG9842_B4205 1049556 1050917 + membrane-flanked domain protein identified by match to protein family HMM PF03703 gene gene1081 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4205 BCG9842_B4206 BCG9842_B4206 BCG9842_B4206 1049033 1049509 + conserved hypothetical protein identified by match to protein family HMM PF03703 gene gene1080 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4206 BCG9842_B4207 BCG9842_B4207 BCG9842_B4207 1047885 1048826 + transporter%2C Drug/Metabolite Exporter family identified by match to protein family HMM PF00892 gene gene1079 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4207 BCG9842_B4208 BCG9842_B4208 BCG9842_B4208 1047049 1047795 + 3-oxoacyl-[acyl-carrier protein] reductase identified by match to protein family HMM PF00106 gene gene1078 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4208 BCG9842_B4209 BCG9842_B4209 BCG9842_B4209 1046315 1047052 + conserved hypothetical protein gene gene1077 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4209 BCG9842_B4210 BCG9842_B4210 BCG9842_B4210 1039297 1045836 + collagen adhesion protein identified by match to protein family HMM PF00746%3B match to protein family HMM PF05737%3B match to protein family HMM PF05738%3B match to protein family HMM TIGR01167 gene gene1076 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4210 BCG9842_B4211 BCG9842_B4211 BCG9842_B4211 1038436 1038972 + transcriptional regulator%2C TetR family identified by match to protein family HMM PF00440 gene gene1075 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4211 BCG9842_B4212 BCG9842_B4212 BCG9842_B4212 1037559 1037984 + conserved hypothetical protein gene gene1074 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4212 BCG9842_B4213 BCG9842_B4213 BCG9842_B4213 1036681 1037334 + integral membrane protein identified by match to protein family HMM PF06161 gene gene1073 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4213 BCG9842_B4214 BCG9842_B4214 BCG9842_B4214 1035064 1036479 + membrane-flanked domain protein identified by match to protein family HMM PF03703 gene gene1072 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4214 BCG9842_B4215 BCG9842_B4215 BCG9842_B4215 1034568 1035044 + conserved hypothetical protein identified by match to protein family HMM PF03703 gene gene1071 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4215 BCG9842_B4216 BCG9842_B4216 BCG9842_B4216 1034321 1034488 + hypothetical protein identified by glimmer%3B putative gene gene1070 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4216 BCG9842_B4217 BCG9842_B4217 BCG9842_B4217 1033737 1034318 + transcriptional regulator%2C TetR family identified by match to protein family HMM PF00440 gene gene1069 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4217 BCG9842_B4218 BCG9842_B4218 ecsC ecsC 1032741 1033448 + EcsC protein gene gene1068 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4218 BCG9842_B4219 BCG9842_B4219 ecsB ecsB 1031516 1032727 + ABC transporter%2C permease protein EscB identified by match to protein family HMM PF05975 gene gene1067 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4219 BCG9842_B4220 BCG9842_B4220 ecsA ecsA 1030780 1031523 + ABC transporter%2C ATP-binding protein EcsA identified by match to protein family HMM PF00005 gene gene1066 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4220 BCG9842_B4221 BCG9842_B4221 BCG9842_B4221 1029783 1030217 - HIT family protein identified by match to protein family HMM PF01230 gene gene1065 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4221 BCG9842_B4222 BCG9842_B4222 BCG9842_B4222 1029240 1029602 - conserved hypothetical protein gene gene1064 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4222 BCG9842_B4223 BCG9842_B4223 hpr hpr 1028383 1028940 - protease production regulatory protein Hpr identified by match to protein family HMM PF01047 gene gene1063 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4223 BCG9842_B4224 BCG9842_B4224 BCG9842_B4224 1028042 1028377 + conserved hypothetical protein identified by match to protein family HMM PF08963 gene gene1062 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4224 BCG9842_B4225 BCG9842_B4225 BCG9842_B4225 1027587 1027700 + hypothetical protein identified by glimmer%3B putative gene gene1061 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4225 BCG9842_B4226 BCG9842_B4226 prsA1 prsA1 1026438 1027307 - peptidylprolyl isomerase PrsA1 identified by match to protein family HMM PF00639 gene gene1060 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4226 BCG9842_B4227 BCG9842_B4227 BCG9842_B4227 1023748 1026084 - helicase%2C UvrD/Rep family identified by match to protein family HMM PF00580 gene gene1059 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4227 BCG9842_B4228 BCG9842_B4228 BCG9842_B4228 1022488 1023741 + cell division protein%2C FtsW/RodA/SpoVE family gene gene1058 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4228 BCG9842_B4229 BCG9842_B4229 BCG9842_B4229 1022073 1022480 + transcriptional regulator%2C PadR family identified by match to protein family HMM PF03551 gene gene1057 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4229 BCG9842_B4230 BCG9842_B4230 BCG9842_B4230 1021535 1022068 + RNA polymerase sigma-70 factor%2C ECF subfamily identified by match to protein family HMM PF04542%3B match to protein family HMM PF04545%3B match to protein family HMM PF08281%3B match to protein family HMM TIGR02937 gene gene1056 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4230 BCG9842_B4231 BCG9842_B4231 BCG9842_B4231 1021091 1021255 - hypothetical protein identified by glimmer%3B putative gene gene1055 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4231 BCG9842_B4232 BCG9842_B4232 glpD glpD 1019210 1020892 + glycerol-3-phosphate dehydrogenase%2C aerobic identified by match to protein family HMM PF01266 gene gene1054 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4232 BCG9842_B4233 BCG9842_B4233 glpK glpK 1017586 1019076 + glycerol kinase identified by match to protein family HMM PF00370%3B match to protein family HMM PF02782%3B match to protein family HMM TIGR01311 gene gene1053 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4233 BCG9842_B4234 BCG9842_B4234 glpF glpF 1016751 1017572 + glycerol uptake facilitator protein identified by match to protein family HMM PF00230%3B match to protein family HMM TIGR00861 gene gene1052 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4234 BCG9842_B4235 BCG9842_B4235 glpP glpP 1015962 1016522 + glycerol uptake operon antiterminator regulatory protein identified by match to protein family HMM PF04309 gene gene1051 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4235 BCG9842_B4236 BCG9842_B4236 BCG9842_B4236 1015415 1015864 + hypothetical protein identified by glimmer%3B putative gene gene1050 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4236 BCG9842_B4237 BCG9842_B4237 BCG9842_B4237 1013890 1015086 + oxalate decarboxylase OxdD identified by match to protein family HMM PF00190%3B match to protein family HMM PF07883%3B match to protein family HMM TIGR03404 gene gene1049 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4237 BCG9842_B4238 BCG9842_B4238 BCG9842_B4238 1013707 1013820 - hypothetical protein identified by glimmer%3B putative gene gene1048 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4238 BCG9842_B4239 BCG9842_B4239 BCG9842_B4239 1012566 1013417 + conserved hypothetical protein gene gene1047 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4239 BCG9842_B4240 BCG9842_B4240 BCG9842_B4240 1012231 1012371 + conserved hypothetical protein gene gene1046 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4240 BCG9842_B4241 BCG9842_B4241 BCG9842_B4241 1011220 1012092 + hydrolase%2C alpha/beta fold family identified by match to protein family HMM PF00561 gene gene1045 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4241 BCG9842_B4242 BCG9842_B4242 BCG9842_B4242 1010779 1010979 + conserved domain protein gene gene1044 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4242 BCG9842_B4243 BCG9842_B4243 BCG9842_B4243 1009685 1010779 + RapA gene gene1043 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4243 BCG9842_B4244 BCG9842_B4244 BCG9842_B4244 1008459 1009436 + glyoxylase family protein identified by match to protein family HMM PF00903 gene gene1042 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4244 BCG9842_B4245 BCG9842_B4245 BCG9842_B4245 1007471 1008415 + glyoxalase family protein identified by match to protein family HMM PF00903 gene gene1041 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4245 BCG9842_B4246 BCG9842_B4246 BCG9842_B4246 1007260 1007376 + conserved hypothetical protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift gene gene1040 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4246 BCG9842_B4247 BCG9842_B4247 BCG9842_B4247 1006353 1006979 - putative homoserine/threonine efflux protein identified by match to protein family HMM PF01810 gene gene1039 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4247 BCG9842_B4248 BCG9842_B4248 BCG9842_B4248 1005560 1005892 + conserved hypothetical protein identified by match to protein family HMM PF08921 gene gene1038 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4248 BCG9842_B4249 BCG9842_B4249 BCG9842_B4249 1004314 1005258 + HD domain protein identified by match to protein family HMM PF01336%3B match to protein family HMM PF01966 gene gene1037 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4249 BCG9842_B4250 BCG9842_B4250 BCG9842_B4250 1001348 1004272 + conserved hypothetical protein gene gene1036 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4250 BCG9842_B4251 BCG9842_B4251 BCG9842_B4251 1000110 1001351 + DNA repair exonuclease family protein identified by match to protein family HMM PF00149 gene gene1035 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4251 BCG9842_B4252 BCG9842_B4252 BCG9842_B4252 999716 999901 - conserved hypothetical protein gene gene1034 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4252 BCG9842_B4253 BCG9842_B4253 BCG9842_B4253 999326 999688 + hypothetical protein identified by glimmer%3B putative gene gene1033 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4253 BCG9842_B4254 BCG9842_B4254 BCG9842_B4254 999031 999171 - conserved hypothetical protein gene gene1032 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4254 BCG9842_B4255 BCG9842_B4255 BCG9842_B4255 997985 998971 + choloylglycine hydrolase identified by match to protein family HMM PF02275 gene gene1031 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4255 BCG9842_B4256 BCG9842_B4256 BCG9842_B4256 996843 997835 - oxidoreductase%2C zinc-binding dehydrogenase family identified by match to protein family HMM PF00107%3B match to protein family HMM PF08240 gene gene1030 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4256 BCG9842_B4257 BCG9842_B4257 BCG9842_B4257 996017 996697 - transcriptional regulator%2C GntR family identified by match to protein family HMM PF00392%3B match to protein family HMM PF07729 gene gene1029 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4257 BCG9842_B4258 BCG9842_B4258 BCG9842_B4258 994756 995940 - MFS family major facilitator transporter identified by match to protein family HMM PF07690 gene gene1028 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4258 BCG9842_B4259 BCG9842_B4259 BCG9842_B4259 994393 994698 - group-specific protein gene gene1027 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4259 BCG9842_B4260 BCG9842_B4260 BCG9842_B4260 994150 994296 + conserved hypothetical protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift gene gene1026 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4260 BCG9842_B4261 BCG9842_B4261 BCG9842_B4261 993402 993713 + conserved hypothetical protein identified by match to protein family HMM PF01906 gene gene1025 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4261 BCG9842_B4262 BCG9842_B4262 BCG9842_B4262 993056 993259 + hypothetical protein identified by glimmer%3B putative gene gene1024 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4262 BCG9842_B4263 BCG9842_B4263 BCG9842_B4263 992358 992888 + conserved hypothetical protein gene gene1023 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4263 BCG9842_B4264 BCG9842_B4264 BCG9842_B4264 992181 992321 + hypothetical protein identified by glimmer%3B putative gene gene1022 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4264 BCG9842_B4265 BCG9842_B4265 BCG9842_B4265 991694 991945 - group-specific protein gene gene1021 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4265 BCG9842_B4266 BCG9842_B4266 BCG9842_B4266 988799 991489 - sensor histidine kinase/response regulator identified by match to protein family HMM PF00072%3B match to protein family HMM PF00512%3B match to protein family HMM PF00672%3B match to protein family HMM PF01590%3B match to protein family HMM PF02518 gene gene1020 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4266 BCG9842_B4267 BCG9842_B4267 BCG9842_B4267 987925 988782 - methyltransferase%2C CheR family identified by match to protein family HMM PF01739%3B match to protein family HMM PF03705 gene gene1019 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4267 BCG9842_B4268 BCG9842_B4268 BCG9842_B4268 986594 987736 + response regulator identified by match to protein family HMM PF00072%3B match to protein family HMM PF07228 gene gene1018 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4268 BCG9842_B4269 BCG9842_B4269 BCG9842_B4269 985981 986421 + conserved hypothetical protein identified by match to protein family HMM PF00210 gene gene1017 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4269 BCG9842_B4270 BCG9842_B4270 sigB sigB 985138 985911 + RNA polymerase sigma-B factor identified by match to protein family HMM PF04539%3B match to protein family HMM PF04542%3B match to protein family HMM PF04545%3B match to protein family HMM TIGR02937%3B match to protein family HMM TIGR02941%3B match to protein family HMM TIGR02980 gene gene1016 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4270 BCG9842_B4271 BCG9842_B4271 rsbW rsbW 984690 985172 + anti-sigma b factor identified by match to protein family HMM TIGR01924 gene gene1015 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4271 BCG9842_B4272 BCG9842_B4272 rsbV rsbV 984345 984683 + anti sigma b factor antagonist RsbV identified by match to protein family HMM PF01740%3B match to protein family HMM TIGR00377 gene gene1014 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4272 BCG9842_B4273 BCG9842_B4273 BCG9842_B4273 983947 984147 - hypothetical protein identified by glimmer%3B putative gene gene1013 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4273 BCG9842_B4274 BCG9842_B4274 BCG9842_B4274 983514 983765 + conserved hypothetical protein identified by match to protein family HMM PF04226 gene gene1012 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4274 BCG9842_B4275 BCG9842_B4275 BCG9842_B4275 983238 983438 + conserved hypothetical protein identified by match to protein family HMM PF05532 gene gene1011 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4275 BCG9842_B4276 BCG9842_B4276 BCG9842_B4276 982798 983187 + conserved hypothetical protein gene gene1010 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4276 BCG9842_B4277 BCG9842_B4277 BCG9842_B4277 982129 982584 - group-specific protein gene gene1009 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4277 BCG9842_B4278 BCG9842_B4278 BCG9842_B4278 981631 982044 + conserved hypothetical protein gene gene1008 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4278 BCG9842_B4279 BCG9842_B4279 BCG9842_B4279 980237 980767 - RNA polymerase%2C sigma-24 subunit%2C ECF subfamily identified by match to protein family HMM PF04542%3B match to protein family HMM PF08281%3B match to protein family HMM TIGR02937 gene gene1007 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4279 BCG9842_B4280 BCG9842_B4280 BCG9842_B4280 979256 980233 - conserved hypothetical protein gene gene1006 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4280 BCG9842_B4281 BCG9842_B4281 BCG9842_B4281 978559 978720 + hypothetical protein identified by glimmer%3B putative gene gene1005 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4281 BCG9842_B4282 BCG9842_B4282 BCG9842_B4282 977814 978425 + conserved hypothetical protein gene gene1004 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4282 BCG9842_B4283 BCG9842_B4283 BCG9842_B4283 977486 977800 + conserved hypothetical protein identified by match to protein family HMM PF01047%3B match to protein family HMM PF03551 gene gene1003 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4283 BCG9842_B4284 BCG9842_B4284 BCG9842_B4284 976687 977331 + conserved hypothetical protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a premature stop gene gene1002 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4284 BCG9842_B4285 BCG9842_B4285 BCG9842_B4285 974828 976561 + S-layer domain protein identified by match to protein family HMM PF00395 gene gene1001 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4285 BCG9842_B4286 BCG9842_B4286 BCG9842_B4286 974442 974585 + conserved hypothetical protein gene gene1000 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4286 BCG9842_B4287 BCG9842_B4287 BCG9842_B4287 973431 973712 + hypothetical protein identified by glimmer%3B putative gene gene999 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4287 BCG9842_B4288 BCG9842_B4288 BCG9842_B4288 972122 973015 - transcriptional regulator%2C XRE family identified by match to protein family HMM PF01381 gene gene998 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4288 BCG9842_B4289 BCG9842_B4289 BCG9842_B4289 971071 971460 + conserved hypothetical protein gene gene997 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4289 BCG9842_B4290 BCG9842_B4290 BCG9842_B4290 970228 970779 - conserved hypothetical protein gene gene996 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4290 BCG9842_B4291 BCG9842_B4291 BCG9842_B4291 969505 969855 + conserved hypothetical protein gene gene995 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4291 BCG9842_B4292 BCG9842_B4292 BCG9842_B4292 968806 968997 + conserved domain protein gene gene994 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4292 BCG9842_B4293 BCG9842_B4293 BCG9842_B4293 968453 968572 + hypothetical protein identified by glimmer%3B putative gene gene993 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4293 BCG9842_B4294 BCG9842_B4294 BCG9842_B4294 966096 967847 + dihydroxyacetone kinase family protein identified by match to protein family HMM PF02733%3B match to protein family HMM PF02734%3B match to protein family HMM TIGR02363%3B match to protein family HMM TIGR02365 gene gene992 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4294 BCG9842_B4295 BCG9842_B4295 BCG9842_B4295 965351 965917 - conserved hypothetical protein identified by match to protein family HMM TIGR02366 gene gene991 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4295 BCG9842_B4296 BCG9842_B4296 BCG9842_B4296 964333 965331 - dihydroxyacetone kinase family protein identified by match to protein family HMM PF02733%3B match to protein family HMM TIGR02362 gene gene990 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4296 BCG9842_B4297 BCG9842_B4297 BCG9842_B4297 963583 964233 + putative membrane protein identified by match to protein family HMM PF04892 gene gene989 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4297 BCG9842_B4298 BCG9842_B4298 BCG9842_B4298 962740 963051 - regulatory protein%2C ArsR gene gene988 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4298 BCG9842_B4299 BCG9842_B4299 BCG9842_B4299 961284 962459 - major facilitator superfamily MFS_1 identified by match to protein family HMM PF07690 gene gene987 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4299 BCG9842_B4300 BCG9842_B4300 BCG9842_B4300 960986 961126 - hypothetical protein identified by glimmer%3B putative gene gene986 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4300 BCG9842_B4301 BCG9842_B4301 BCG9842_B4301 960056 960352 + ATP synthase protein I gene gene985 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4301 BCG9842_B4302 BCG9842_B4302 pssA pssA 959408 959941 + CDP-diacylglycerol--serine O-phosphatidyltransferase identified by match to protein family HMM PF01066%3B match to protein family HMM TIGR00473 gene gene984 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4302 BCG9842_B4303 BCG9842_B4303 BCG9842_B4303 958906 959364 + transcriptional regulator%2C MarR family identified by match to protein family HMM PF01047 gene gene983 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4303 BCG9842_B4304 BCG9842_B4304 BCG9842_B4304 958649 958786 + conserved hypothetical protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift gene gene982 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4304 BCG9842_B4305 BCG9842_B4305 BCG9842_B4305 958063 958329 - group-specific protein gene gene981 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4305 BCG9842_B4306 BCG9842_B4306 BCG9842_B4306 957799 957942 - conserved hypothetical protein%2C putative identified by match to protein family HMM PF09680%3B match to protein family HMM TIGR01732 gene gene980 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4306 BCG9842_B4307 BCG9842_B4307 BCG9842_B4307 957126 957680 + conserved hypothetical protein identified by match to protein family HMM PF04982 gene gene979 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4307 BCG9842_B4308 BCG9842_B4308 BCG9842_B4308 956425 957009 + conserved hypothetical protein identified by match to protein family HMM PF07336 gene gene978 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4308 BCG9842_B4309 BCG9842_B4309 BCG9842_B4309 955467 956006 - conserved hypothetical protein gene gene977 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4309 BCG9842_B4310 BCG9842_B4310 BCG9842_B4310 955105 955362 + group-specific protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift gene gene976 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4310 BCG9842_B4311 BCG9842_B4311 BCG9842_B4311 954782 954907 - conserved hypothetical protein identified by match to protein family HMM PF09680%3B match to protein family HMM TIGR01732 gene gene975 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4311 BCG9842_B4312 BCG9842_B4312 BCG9842_B4312 953590 954291 + conserved hypothetical protein gene gene974 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4312 BCG9842_B4313 BCG9842_B4313 BCG9842_B4313 952958 953353 + conserved hypothetical protein gene gene973 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4313 BCG9842_B4314 BCG9842_B4314 BCG9842_B4314 952202 952354 - conserved hypothetical protein%2C putative identified by match to protein family HMM PF09680%3B match to protein family HMM TIGR01732 gene gene972 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4314 BCG9842_B4315 BCG9842_B4315 BCG9842_B4315 950142 951524 - conserved hypothetical protein gene gene971 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4315 BCG9842_B4316 BCG9842_B4316 BCG9842_B4316 949670 950062 + group-specific protein gene gene970 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4316 BCG9842_B4317 BCG9842_B4317 BCG9842_B4317 948671 949342 + fimbria associated protein identified by match to protein family HMM PF04203%3B match to protein family HMM TIGR01076 gene gene969 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4317 BCG9842_B4318 BCG9842_B4318 BCG9842_B4318 948027 948614 + lpxtg-motif cell wall anchor domain protein identified by match to protein family HMM PF00746%3B match to protein family HMM TIGR01167 gene gene968 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4318 BCG9842_B4319 BCG9842_B4319 BCG9842_B4319 947045 947506 - conserved hypothetical protein gene gene967 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4319 BCG9842_B4320 BCG9842_B4320 BCG9842_B4320 946255 946800 + ribosomal-protein-alanine acetyltransferase identified by match to protein family HMM PF00583 gene gene966 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4320 BCG9842_B4321 BCG9842_B4321 BCG9842_B4321 945973 946122 + conserved hypothetical protein%2C putative identified by match to protein family HMM PF09680%3B match to protein family HMM TIGR01732 gene gene965 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4321 BCG9842_B4322 BCG9842_B4322 BCG9842_B4322 945666 945800 - hypothetical protein identified by glimmer%3B putative gene gene964 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4322 BCG9842_B4323 BCG9842_B4323 BCG9842_B4323 945013 945573 + conserved hypothetical protein gene gene963 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4323 BCG9842_B4324 BCG9842_B4324 BCG9842_B4324 944626 944775 - hypothetical protein identified by glimmer%3B putative gene gene962 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4324 BCG9842_B4325 BCG9842_B4325 BCG9842_B4325 943019 944494 + drug resistance transporter%2C EmrB/QacA family identified by match to protein family HMM PF07690%3B match to protein family HMM TIGR00711 gene gene961 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4325 BCG9842_B4326 BCG9842_B4326 BCG9842_B4326 942301 942876 - transcriptional regulator%2C TetR-related family gene gene960 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4326 BCG9842_B4327 BCG9842_B4327 BCG9842_B4327 940906 941673 + putative membrane protein identified by match to protein family HMM PF01925 gene gene959 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4327 BCG9842_B4328 BCG9842_B4328 BCG9842_B4328 939859 940644 - conserved hypothetical protein identified by match to protein family HMM PF01978 gene gene958 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4328 BCG9842_B4329 BCG9842_B4329 BCG9842_B4329 938851 939699 + conserved domain protein gene gene957 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4329 BCG9842_B4330 BCG9842_B4330 dnaB_2 dnaB_2 937446 938735 + replicative DNA helicase identified by match to protein family HMM PF00772%3B match to protein family HMM PF03796%3B match to protein family HMM TIGR00665 gene gene956 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4330 BCG9842_B4331 BCG9842_B4331 BCG9842_B4331 936583 937449 + DnaD domain protein identified by match to protein family HMM PF04271%3B match to protein family HMM TIGR01446 gene gene955 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4331 BCG9842_B4332 BCG9842_B4332 BCG9842_B4332 934197 935420 - conserved hypothetical protein gene gene954 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4332 BCG9842_B4333 BCG9842_B4333 BCG9842_B4333 934012 934131 + hypothetical protein identified by glimmer%3B putative gene gene953 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4333 BCG9842_B4334 BCG9842_B4334 BCG9842_B4334 932406 933755 + type II restriction-modification system restriction subunit gene gene952 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4334 BCG9842_B4335 BCG9842_B4335 BCG9842_B4335 931276 932334 + R1.LlaJI an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts gene gene951 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4335 BCG9842_B4336 BCG9842_B4336 BCG9842_B4336 930140 931183 + hypothetical protein identified by glimmer%3B putative gene gene950 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4336 BCG9842_B4337 BCG9842_B4337 BCG9842_B4337 929006 930052 + cytosine-specific methyltransferase NlaX identified by match to protein family HMM PF00145%3B match to protein family HMM TIGR00675 gene gene949 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4337 BCG9842_B4338 BCG9842_B4338 BCG9842_B4338 927603 929009 + modification methylase DdeI identified by match to protein family HMM PF00145%3B match to protein family HMM TIGR00675 gene gene948 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4338 BCG9842_B4340 BCG9842_B4340 BCG9842_B4340 926225 926608 + RNA-directed DNA polymerase an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a premature stop gene gene947 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4340 BCG9842_B4341 BCG9842_B4341 BCG9842_B4341 926009 926191 + group II intron-encoded protein LtrA an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a premature stop gene gene946 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4341 BCG9842_B4342 BCG9842_B4342 BCG9842_B4342 925067 925615 + type II restriction endonuclease family protein identified by match to protein family HMM PF04471 gene gene945 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4342 BCG9842_B4343 BCG9842_B4343 BCG9842_B4343 924832 925029 + hypothetical protein identified by glimmer%3B putative gene gene944 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4343 BCG9842_B4344 BCG9842_B4344 BCG9842_B4344 923729 924706 + putative lipoprotein identified by match to protein family HMM PF03401 gene gene943 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4344 BCG9842_B4345 BCG9842_B4345 BCG9842_B4345 923055 923732 + response regulator identified by match to protein family HMM PF00072 gene gene942 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4345 BCG9842_B4346 BCG9842_B4346 BCG9842_B4346 921446 923035 + sensor histidine kinase identified by match to protein family HMM PF02518 gene gene941 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4346 BCG9842_B4347 BCG9842_B4347 BCG9842_B4347 919899 921221 - putative alpha-ketoglutarate permease identified by match to protein family HMM PF00083%3B match to protein family HMM PF07690 gene gene940 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4347 BCG9842_B4348 BCG9842_B4348 BCG9842_B4348 919552 919707 - integrase gene gene939 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4348 BCG9842_B4349 BCG9842_B4349 BCG9842_B4349 919186 919467 + hypothetical protein identified by glimmer%3B putative gene gene938 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4349 BCG9842_B4350 BCG9842_B4350 BCG9842_B4350 918973 919164 + conserved hypothetical protein gene gene937 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4350 BCG9842_B4351 BCG9842_B4351 BCG9842_B4351 918722 918868 + conserved hypothetical protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift gene gene936 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4351 BCG9842_B4352 BCG9842_B4352 BCG9842_B4352 917998 918648 + hypothetical protein identified by glimmer%3B putative gene gene935 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4352 BCG9842_B4353 BCG9842_B4353 BCG9842_B4353 917205 917585 + putative membrane protein gene gene934 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4353 BCG9842_B4354 BCG9842_B4354 BCG9842_B4354 916933 917046 - hypothetical protein identified by glimmer%3B putative gene gene933 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4354 BCG9842_B4355 BCG9842_B4355 BCG9842_B4355 916312 916692 + conserved hypothetical protein gene gene932 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4355 BCG9842_B4356 BCG9842_B4356 BCG9842_B4356 915931 916284 + conserved hypothetical protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift gene gene931 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4356 BCG9842_B4357 BCG9842_B4357 BCG9842_B4357 915263 915709 + conserved hypothetical protein identified by match to protein family HMM PF09346 gene gene930 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4357 BCG9842_B4358 BCG9842_B4358 BCG9842_B4358 914792 915244 + SMI1 / KNR4 family identified by match to protein family HMM PF09346 gene gene929 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4358 BCG9842_B4359 BCG9842_B4359 BCG9842_B4359 913127 914767 + hypothetical Cytosolic Protein gene gene928 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4359 BCG9842_B4360 BCG9842_B4360 BCG9842_B4360 912768 913130 + conserved hypothetical protein gene gene927 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4360 BCG9842_B4361 BCG9842_B4361 BCG9842_B4361 912452 912727 + conserved hypothetical protein gene gene926 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4361 BCG9842_B4362 BCG9842_B4362 BCG9842_B4362 911993 912289 + WXG domain protein identified by match to protein family HMM PF06013 gene gene925 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4362 BCG9842_B4363 BCG9842_B4363 BCG9842_B4363 911135 911782 + transposase an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF00665 gene gene924 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4363 BCG9842_B4364 BCG9842_B4364 BCG9842_B4364 910421 910942 + transposase identified by match to protein family HMM PF01527 gene gene923 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4364 BCG9842_B4365 BCG9842_B4365 BCG9842_B4365 910014 910343 + conserved hypothetical protein gene gene922 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4365 BCG9842_B4366 BCG9842_B4366 BCG9842_B4366 909127 909276 - hypothetical protein identified by glimmer%3B putative gene gene921 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4366 BCG9842_B4367 BCG9842_B4367 BCG9842_B4367 908439 908672 + hypothetical protein identified by glimmer%3B putative gene gene920 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4367 BCG9842_B4368 BCG9842_B4368 BCG9842_B4368 908259 908378 + hypothetical protein identified by glimmer%3B putative gene gene919 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4368 BCG9842_B4369 BCG9842_B4369 BCG9842_B4369 907679 908158 + group-specific protein identified by match to protein family HMM PF05163 gene gene918 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4369 BCG9842_B4370 BCG9842_B4370 BCG9842_B4370 906419 907651 + transporter%2C major facilitator family identified by match to protein family HMM PF07690 gene gene917 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4370 BCG9842_B4371 BCG9842_B4371 BCG9842_B4371 905309 906412 + HesA/MoeB/ThiF family protein identified by match to protein family HMM PF00899 gene gene916 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4371 BCG9842_B4372 BCG9842_B4372 BCG9842_B4372 904216 905016 + conserved hypothetical protein gene gene915 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4372 BCG9842_B4373 BCG9842_B4373 BCG9842_B4373 902192 904093 - conserved hypothetical protein gene gene914 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4373 BCG9842_B4374 BCG9842_B4374 purB_1 purB_1 900801 902156 + adenylosuccinate lyase identified by match to protein family HMM PF00206%3B match to protein family HMM TIGR00928 gene gene913 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4374 BCG9842_B4375 BCG9842_B4375 BCG9842_B4375 900207 900338 + hypothetical protein identified by glimmer%3B putative gene gene912 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4375 BCG9842_B4376 BCG9842_B4376 BCG9842_B4376 893791 899955 + linear gramicidin synthetase subunit D identified by match to protein family HMM PF00501%3B match to protein family HMM PF00550%3B match to protein family HMM PF00668%3B match to protein family HMM PF01073%3B match to protein family HMM PF07993%3B match to protein family HMM TIGR01733 gene gene911 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4376 BCG9842_B4377 BCG9842_B4377 BCG9842_B4377 892776 892910 - conserved hypothetical protein gene gene910 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4377 BCG9842_B4378 BCG9842_B4378 BCG9842_B4378 892057 892581 + conserved hypothetical protein identified by match to protein family HMM PF07366 gene gene909 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4378 BCG9842_B4379 BCG9842_B4379 BCG9842_B4379 891518 891910 + conserved hypothetical protein gene gene908 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4379 BCG9842_B4380 BCG9842_B4380 BCG9842_B4380 890692 891513 + hypothetical Cytosolic Protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a premature stop%3B identified by match to protein family HMM PF00753 gene gene907 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4380 BCG9842_B4381 BCG9842_B4381 BCG9842_B4381 889746 890366 + thioredoxin gene gene906 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4381 BCG9842_B4382 BCG9842_B4382 BCG9842_B4382 888165 889136 + oligopeptide transport ATP-binding protein AppF identified by match to protein family HMM PF00005%3B match to protein family HMM PF08352%3B match to protein family HMM TIGR01727 gene gene905 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4382 BCG9842_B4383 BCG9842_B4383 BCG9842_B4383 887180 888172 + oligopeptide ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005%3B match to protein family HMM PF08352%3B match to protein family HMM TIGR01727 gene gene904 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4383 BCG9842_B4384 BCG9842_B4384 BCG9842_B4384 886302 887153 + oligopeptide ABC transporter%2C permease protein identified by match to protein family HMM PF00528 gene gene903 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4384 BCG9842_B4385 BCG9842_B4385 BCG9842_B4385 885345 886295 + oligopeptide ABC transporter%2C permease protein identified by match to protein family HMM PF00528 gene gene902 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4385 BCG9842_B4386 BCG9842_B4386 BCG9842_B4386 883700 885289 + oligopeptide ABC transporter%2C oligopeptide-binding protein identified by match to protein family HMM PF00496 gene gene901 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4386 BCG9842_B4387 BCG9842_B4387 BCG9842_B4387 882520 883497 + ornithine cyclodeaminase identified by match to protein family HMM PF01488%3B match to protein family HMM PF02423 gene gene900 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4387 BCG9842_B4388 BCG9842_B4388 BCG9842_B4388 881352 882356 + putative proline racemase identified by match to protein family HMM PF05544 gene gene899 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4388 BCG9842_B4389 BCG9842_B4389 BCG9842_B4389 880913 881059 - conserved hypothetical protein gene gene898 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4389 BCG9842_B4390 BCG9842_B4390 BCG9842_B4390 879854 880807 + conserved domain protein identified by match to protein family HMM PF01170 gene gene897 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4390 BCG9842_B4391 BCG9842_B4391 BCG9842_B4391 878096 879703 + S-layer protein identified by match to protein family HMM PF00395%3B match to protein family HMM PF01520 gene gene896 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4391 BCG9842_B4392 BCG9842_B4392 BCG9842_B4392 876738 877787 + deblocking aminopeptidase identified by match to protein family HMM PF05343 gene gene895 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4392 BCG9842_B4393 BCG9842_B4393 BCG9842_B4393 876432 876611 - hypothetical protein identified by glimmer%3B putative gene gene894 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4393 BCG9842_B4394 BCG9842_B4394 BCG9842_B4394 876081 876410 + phosphoribosyl-ATP pyrophosphohydrolase gene gene893 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4394 BCG9842_B4395 BCG9842_B4395 BCG9842_B4395 875749 876066 + conserved hypothetical protein gene gene892 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4395 BCG9842_B4396 BCG9842_B4396 BCG9842_B4396 874854 875642 + enoyl-CoA hydratase/isomerase family protein identified by match to protein family HMM PF00378 gene gene891 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4396 BCG9842_B4397 BCG9842_B4397 BCG9842_B4397 873134 874528 - putative membrane protein gene gene890 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4397 BCG9842_B4398 BCG9842_B4398 BCG9842_B4398 871225 873087 + S-layer protein identified by match to protein family HMM PF00395%3B match to protein family HMM PF01832 gene gene889 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4398 BCG9842_B4399 BCG9842_B4399 csaB csaB 869994 871082 + polysaccharide pyruvyl transferase CsaB identified by match to protein family HMM PF04230%3B match to protein family HMM TIGR03609 gene gene888 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4399 BCG9842_B4400 BCG9842_B4400 BCG9842_B4400 868330 869850 + polysaccharides export protein identified by match to protein family HMM PF01554%3B match to protein family HMM PF01943%3B match to protein family HMM PF03023 gene gene887 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4400 BCG9842_B4401 BCG9842_B4401 BCG9842_B4401 866526 867995 + sulfate transporter identified by match to protein family HMM PF00860%3B match to protein family HMM PF00916%3B match to protein family HMM PF00955%3B match to protein family HMM PF01740 gene gene886 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4401 BCG9842_B4402 BCG9842_B4402 BCG9842_B4402 865874 866338 - conserved hypothetical protein gene gene885 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4402 BCG9842_B4403 BCG9842_B4403 BCG9842_B4403 864290 865846 + AMP-binding protein identified by match to protein family HMM PF00501 gene gene884 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4403 BCG9842_B4404 BCG9842_B4404 BCG9842_B4404 862532 864019 + putative oxygen-independent coproporphyrinogen III oxidase identified by match to protein family HMM PF04055 gene gene883 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4404 BCG9842_B4405 BCG9842_B4405 BCG9842_B4405 860575 862278 - N-acetylmuramoyl-L-alanine amidase identified by match to protein family HMM PF00395%3B match to protein family HMM PF01510 gene gene882 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4405 BCG9842_B4406 BCG9842_B4406 BCG9842_B4406 857168 860506 + lpxtg-motif cell wall anchor domain protein identified by match to protein family HMM PF05738%3B match to protein family HMM TIGR01167 gene gene881 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4406 BCG9842_B4407 BCG9842_B4407 BCG9842_B4407 855901 856773 + hydrolase%2C haloacid dehalogenase-like family identified by match to protein family HMM PF00702%3B match to protein family HMM PF08282%3B match to protein family HMM TIGR01484 gene gene880 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4407 BCG9842_B4408 BCG9842_B4408 BCG9842_B4408 855149 855766 - methylpurine-DNA glycosylase family protein identified by match to protein family HMM PF02245%3B match to protein family HMM TIGR00567 gene gene879 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4408 BCG9842_B4409 BCG9842_B4409 alsD alsD 854252 855010 + alpha-acetolactate decarboxylase identified by match to protein family HMM PF03306%3B match to protein family HMM TIGR01252 gene gene878 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4409 BCG9842_B4410 BCG9842_B4410 alsS alsS 852547 854235 + acetolactate synthase%2C catabolic identified by match to protein family HMM PF00205%3B match to protein family HMM PF02775%3B match to protein family HMM PF02776%3B match to protein family HMM TIGR02418 gene gene877 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4410 BCG9842_B4411 BCG9842_B4411 BCG9842_B4411 851551 852111 - conserved hypothetical protein identified by match to protein family HMM PF08006 gene gene876 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4411 BCG9842_B4412 BCG9842_B4412 BCG9842_B4412 850933 851529 - lipoprotein gene gene875 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4412 BCG9842_B4413 BCG9842_B4413 BCG9842_B4413 850211 850423 + conserved hypothetical protein gene gene874 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4413 BCG9842_B4414 BCG9842_B4414 BCG9842_B4414 848766 849791 + cell surface protein identified by match to protein family HMM PF06030 gene gene873 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4414 BCG9842_B4415 BCG9842_B4415 BCG9842_B4415 847925 848665 + cell surface protein gene gene872 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4415 BCG9842_B4416 BCG9842_B4416 BCG9842_B4416 847139 847879 + cell surface protein gene gene871 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4416 BCG9842_B4417 BCG9842_B4417 BCG9842_B4417 846787 847116 + lpxtg-motif cell wall anchor domain protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM TIGR01167 gene gene870 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4417 BCG9842_B4418 BCG9842_B4418 BCG9842_B4418 843107 846730 + conserved hypothetical protein gene gene869 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4418 BCG9842_B4419 BCG9842_B4419 BCG9842_B4419 842098 842754 + competence protein A identified by match to protein family HMM PF00072%3B match to protein family HMM PF00196 gene gene868 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4419 BCG9842_B4420 BCG9842_B4420 BCG9842_B4420 839734 842034 + sensor histidine kinase identified by match to protein family HMM PF02518 gene gene867 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4420 BCG9842_B4421 BCG9842_B4421 BCG9842_B4421 839084 839329 + conserved hypothetical protein gene gene866 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4421 BCG9842_B4422 BCG9842_B4422 BCG9842_B4422 838374 838730 + conserved hypothetical protein identified by match to protein family HMM PF06133 gene gene865 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4422 BCG9842_B4423 BCG9842_B4423 BCG9842_B4423 837095 838231 + conserved hypothetical protein identified by match to protein family HMM PF04286 gene gene864 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4423 BCG9842_B4424 BCG9842_B4424 BCG9842_B4424 835913 836965 - conserved hypothetical protein gene gene863 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4424 BCG9842_B4425 BCG9842_B4425 BCG9842_B4425 834435 835892 - conserved hypothetical protein gene gene862 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4425 BCG9842_B4426 BCG9842_B4426 BCG9842_B4426 834167 834415 + conserved hypothetical protein gene gene861 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4426 BCG9842_B4427 BCG9842_B4427 sasP1 sasP1 833516 833719 - small acid-soluble spore protein identified by match to protein family HMM PF00269 gene gene860 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4427 BCG9842_B4428 BCG9842_B4428 BCG9842_B4428 832730 833464 + amino acid ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005 gene gene859 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4428 BCG9842_B4429 BCG9842_B4429 BCG9842_B4429 832072 832701 + amino acid ABC transporter%2C permease protein identified by match to protein family HMM PF00528%3B match to protein family HMM TIGR01726 gene gene858 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4429 BCG9842_B4430 BCG9842_B4430 BCG9842_B4430 831219 832016 + amino acid ABC transporter%2C amino acid-binding protein identified by match to protein family HMM PF00497 gene gene857 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4430 BCG9842_B4431 BCG9842_B4431 BCG9842_B4431 828924 830924 + ABC transporter%2C permease/ATP-binding protein identified by match to protein family HMM PF00005%3B match to protein family HMM PF00664 gene gene856 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4431 BCG9842_B4432 BCG9842_B4432 BCG9842_B4432 827281 828927 + ABC transporter%2C permease/ATP-binding protein identified by match to protein family HMM PF00005%3B match to protein family HMM PF00664 gene gene855 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4432 BCG9842_B4433 BCG9842_B4433 BCG9842_B4433 826893 827270 - conserved hypothetical protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift gene gene854 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4433 BCG9842_B4434 BCG9842_B4434 gapN gapN 825132 826571 - glyceraldehyde-3-phosphate dehydrogenase%2C NADP-dependent identified by match to protein family HMM PF00171 gene gene853 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4434 BCG9842_B4436 BCG9842_B4436 BCG9842_B4436 823201 824625 - amino acid permease family protein identified by match to protein family HMM PF00324 gene gene852 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4436 BCG9842_B4437 BCG9842_B4437 BCG9842_B4437 821941 823140 - putative permease identified by match to protein family HMM PF05975 gene gene851 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4437 BCG9842_B4438 BCG9842_B4438 BCG9842_B4438 819753 821750 - catalase identified by match to protein family HMM PF00199%3B match to protein family HMM PF06628 gene gene850 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4438 BCG9842_B4439 BCG9842_B4439 BCG9842_B4439 819214 819729 - intracellular protease 1 identified by match to protein family HMM PF01965%3B match to protein family HMM TIGR01382 gene gene849 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4439 BCG9842_B4440 BCG9842_B4440 BCG9842_B4440 818685 818888 - conserved domain protein gene gene848 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4440 BCG9842_B4441 BCG9842_B4441 BCG9842_B4441 818020 818568 + NAD(P)H dehydrogenase%2C quinone family identified by match to protein family HMM PF02525 gene gene847 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4441 BCG9842_B4442 BCG9842_B4442 BCG9842_B4442 817457 817996 + putative lipoprotein identified by match to protein family HMM PF07366 gene gene846 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4442 BCG9842_B4443 BCG9842_B4443 BCG9842_B4443 816949 817287 - transcriptional regulator%2C MarR family identified by match to protein family HMM PF01047%3B match to protein family HMM PF01638 gene gene845 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4443 BCG9842_B4444 BCG9842_B4444 blT blT 815691 816893 + multidrug resistance protein identified by match to protein family HMM PF00083%3B match to protein family HMM PF05978%3B match to protein family HMM PF07690 gene gene844 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4444 BCG9842_B4445 BCG9842_B4445 BCG9842_B4445 814903 815478 + transcriptional regulator%2C TetR family identified by match to protein family HMM PF00440 gene gene843 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4445 BCG9842_B4446 BCG9842_B4446 BCG9842_B4446 814456 814770 + putative sugE protein identified by match to protein family HMM PF00893 gene gene842 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4446 BCG9842_B4447 BCG9842_B4447 BCG9842_B4447 814109 814453 + putative sugE protein identified by match to protein family HMM PF00893 gene gene841 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4447 BCG9842_B4448 BCG9842_B4448 BCG9842_B4448 813750 813863 + conserved hypothetical protein gene gene840 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4448 BCG9842_B4449 BCG9842_B4449 BCG9842_B4449 813338 813697 + mercuric resistance operon regulatory protein identified by match to protein family HMM PF00376%3B match to protein family HMM PF09278 gene gene839 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4449 BCG9842_B4450 BCG9842_B4450 BCG9842_B4450 812433 813203 - oxidoreductase identified by match to protein family HMM PF00106 gene gene838 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4450 BCG9842_B4451 BCG9842_B4451 BCG9842_B4451 811911 812366 + acetyltransferase%2C GNAT family identified by match to protein family HMM PF00583 gene gene837 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4451 BCG9842_B4452 BCG9842_B4452 BCG9842_B4452 811288 811782 + transcriptional regulator%2C AsnC family identified by match to protein family HMM PF01037 gene gene836 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4452 BCG9842_B4453 BCG9842_B4453 BCG9842_B4453 810171 811082 - transporter%2C EamA family identified by match to protein family HMM PF00892%3B match to protein family HMM PF03151 gene gene835 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4453 BCG9842_B4454 BCG9842_B4454 BCG9842_B4454 809651 810136 + conserved hypothetical protein gene gene834 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4454 BCG9842_B4455 BCG9842_B4455 BCG9842_B4455 809250 809651 + conserved hypothetical protein gene gene833 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4455 BCG9842_B4456 BCG9842_B4456 BCG9842_B4456 808691 809095 + conserved hypothetical protein identified by match to protein family HMM PF07681 gene gene832 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4456 BCG9842_B4457 BCG9842_B4457 BCG9842_B4457 807465 808538 + conserved hypothetical protein identified by match to protein family HMM PF05913 gene gene831 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4457 BCG9842_B4458 BCG9842_B4458 BCG9842_B4458 806052 807416 + PTS system%2C sucrose-specific IIBC component identified by match to protein family HMM PF00367%3B match to protein family HMM PF02378 gene gene830 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4458 BCG9842_B4459 BCG9842_B4459 BCG9842_B4459 805143 806027 + glucokinase regulator-related protein identified by match to protein family HMM PF01380%3B match to protein family HMM TIGR00274 gene gene829 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4459 BCG9842_B4460 BCG9842_B4460 BCG9842_B4460 804124 804987 + putative transcriptional regulator%2C RpiR family identified by match to protein family HMM PF01380%3B match to protein family HMM PF01418 gene gene828 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4460 BCG9842_B4461 BCG9842_B4461 BCG9842_B4461 803780 804094 + group-specific protein gene gene827 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4461 BCG9842_B4462 BCG9842_B4462 BCG9842_B4462 802528 803655 + germination protein gerN identified by match to protein family HMM PF00999%3B match to protein family HMM TIGR00932 gene gene826 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4462 BCG9842_B4463 BCG9842_B4463 BCG9842_B4463 800866 802269 - amino acid permease family protein identified by match to protein family HMM PF00324 gene gene825 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4463 BCG9842_B4464 BCG9842_B4464 BCG9842_B4464 800667 800837 + hypothetical protein identified by glimmer%3B putative gene gene824 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4464 BCG9842_B4465 BCG9842_B4465 BCG9842_B4465 800451 800654 + conserved hypothetical protein gene gene823 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4465 BCG9842_B4466 BCG9842_B4466 BCG9842_B4466 797909 800371 + purple acid phosphatase/fibronectin domain protein identified by match to protein family HMM PF00041%3B match to protein family HMM PF00149 gene gene822 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4466 BCG9842_B4467 BCG9842_B4467 BCG9842_B4467 797414 797647 + conserved hypothetical protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift gene gene821 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4467 BCG9842_B4468 BCG9842_B4468 BCG9842_B4468 797131 797382 - group-specific protein gene gene820 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4468 BCG9842_B4469 BCG9842_B4469 BCG9842_B4469 796733 797077 + hypothetical protein identified by glimmer%3B putative gene gene819 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4469 BCG9842_B4470 BCG9842_B4470 BCG9842_B4470 796344 796712 + hypothetical protein identified by glimmer%3B putative gene gene818 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4470 BCG9842_B4471 BCG9842_B4471 BCG9842_B4471 795640 796245 + dedA family protein identified by match to protein family HMM PF09335 gene gene817 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4471 BCG9842_B4472 BCG9842_B4472 BCG9842_B4472 795347 795628 + conserved hypothetical protein identified by match to protein family HMM PF06803 gene gene816 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4472 BCG9842_B4474 BCG9842_B4474 BCG9842_B4474 794183 794995 - Ku protein identified by match to protein family HMM PF02735%3B match to protein family HMM TIGR02772 gene gene815 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4474 BCG9842_B4475 BCG9842_B4475 BCG9842_B4475 793385 794164 + conserved hypothetical protein gene gene814 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4475 BCG9842_B4476 BCG9842_B4476 BCG9842_B4476 793008 793370 + conserved hypothetical protein gene gene813 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4476 BCG9842_B4477 BCG9842_B4477 cotJA cotJA 792693 792908 - cotJA protein gene gene812 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4477 BCG9842_B4478 BCG9842_B4478 cotJB cotJB 792421 792684 - cotJB protein gene gene811 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4478 BCG9842_B4479 BCG9842_B4479 cotJC cotJC 791839 792408 - cotJC protein identified by match to protein family HMM PF05067 gene gene810 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4479 BCG9842_B4480 BCG9842_B4480 brnQ2 brnQ2 790304 791620 - branched-chain amino acid transport system II carrier protein identified by match to protein family HMM PF05525%3B match to protein family HMM TIGR00796 gene gene809 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4480 BCG9842_B4481 BCG9842_B4481 BCG9842_B4481 789255 790259 + ABC transporter%2C permease protein identified by match to protein family HMM PF00528 gene gene808 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4481 BCG9842_B4482 BCG9842_B4482 BCG9842_B4482 788387 789253 + putative ABC transporter%2C permease protein identified by match to protein family HMM PF00528 gene gene807 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4482 BCG9842_B4483 BCG9842_B4483 BCG9842_B4483 787562 788296 + putative ABC transporter%2C permease protein identified by match to protein family HMM PF09529%3B match to protein family HMM TIGR02206 gene gene806 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4483 BCG9842_B4484 BCG9842_B4484 BCG9842_B4484 786244 787350 - conserved hypothetical protein identified by match to protein family HMM TIGR01730 gene gene805 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4484 BCG9842_B4485 BCG9842_B4485 BCG9842_B4485 785573 786247 - ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005 gene gene804 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4485 BCG9842_B4486 BCG9842_B4486 BCG9842_B4486 784395 785570 - putative ABC transporter%2C permease protein identified by match to protein family HMM PF02687 gene gene803 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4486 BCG9842_B4487 BCG9842_B4487 BCG9842_B4487 782528 783937 - enterotoxin identified by match to protein family HMM PF06347%3B match to protein family HMM PF06725%3B match to protein family HMM PF08239 gene gene802 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4487 BCG9842_B4488 BCG9842_B4488 BCG9842_B4488 781209 782294 + conserved hypothetical protein identified by match to protein family HMM PF05913 gene gene801 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4488 BCG9842_B4489 BCG9842_B4489 BCG9842_B4489 780941 781219 + hypothetical protein identified by glimmer%3B putative gene gene800 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4489 BCG9842_B4490 BCG9842_B4490 celB1 celB1 779655 780965 + PTS system%2C cellobiose-specific IIC component identified by match to protein family HMM PF02378%3B match to protein family HMM TIGR00410 gene gene799 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4490 BCG9842_B4491 BCG9842_B4491 celA1 celA1 779308 779571 + PTS system%2C cellobiose-specific IIB component identified by match to protein family HMM PF02302 gene gene798 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4491 BCG9842_B4492 BCG9842_B4492 celC1 celC1 778944 779264 + PTS system%2C cellobiose-specific IIA component identified by match to protein family HMM PF02255 gene gene797 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4492 BCG9842_B4493 BCG9842_B4493 BCG9842_B4493 776893 778833 + transcription antiterminator%2C BglG family identified by match to protein family HMM PF00359%3B match to protein family HMM PF00874%3B match to protein family HMM PF05043%3B match to protein family HMM PF08279 gene gene796 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4493 BCG9842_B4494 BCG9842_B4494 BCG9842_B4494 775728 776816 + conserved hypothetical protein identified by match to protein family HMM PF05913 gene gene795 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4494 BCG9842_B4495 BCG9842_B4495 BCG9842_B4495 774063 775265 - major facilitator family transporter an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts%3B identified by match to protein family HMM PF07690 gene gene794 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4495 BCG9842_B4496 BCG9842_B4496 BCG9842_B4496 772056 773711 - Na/Pi-cotransporter family protein identified by match to protein family HMM PF01895%3B match to protein family HMM PF02690%3B match to protein family HMM TIGR00704 gene gene793 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4496 BCG9842_B4497 BCG9842_B4497 BCG9842_B4497 771021 772019 + putative quinone oxidoreductase%2C YhdH/YhfP family identified by match to protein family HMM PF00107%3B match to protein family HMM PF08240%3B match to protein family HMM TIGR02823 gene gene792 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4497 BCG9842_B4498 BCG9842_B4498 BCG9842_B4498 769507 770706 - transcription antiterminator%2C LytR family identified by match to protein family HMM PF03816%3B match to protein family HMM TIGR00350 gene gene791 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4498 BCG9842_B4499 BCG9842_B4499 BCG9842_B4499 768918 769358 - hypothetical protein identified by glimmer%3B putative gene gene790 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4499 BCG9842_B4500 BCG9842_B4500 BCG9842_B4500 768121 768885 + putative membrane protein identified by match to protein family HMM PF01925 gene gene789 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4500 BCG9842_B4501 BCG9842_B4501 BCG9842_B4501 767608 768087 + rhodanese domain family protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a premature stop gene gene788 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4501 BCG9842_B4502 BCG9842_B4502 BCG9842_B4502 767214 767534 + rhodanese domain protein identified by match to protein family HMM PF00581 gene gene787 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4502 BCG9842_B4503 BCG9842_B4503 BCG9842_B4503 766865 767224 + rhodanese-like domain protein identified by match to protein family HMM PF00581 gene gene786 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4503 BCG9842_B4504 BCG9842_B4504 BCG9842_B4504 766597 766827 + conserved hypothetical protein identified by match to protein family HMM PF01206 gene gene785 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4504 BCG9842_B4505 BCG9842_B4505 BCG9842_B4505 765438 766574 + metallo-beta-lactamase family protein identified by match to protein family HMM PF00753 gene gene784 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4505 BCG9842_B4506 BCG9842_B4506 BCG9842_B4506 764839 765399 + rhodanese domain protein identified by match to protein family HMM PF00581%3B match to protein family HMM PF01206 gene gene783 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4506 BCG9842_B4507 BCG9842_B4507 BCG9842_B4507 764487 764750 + YrkD identified by match to protein family HMM PF02583 gene gene782 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4507 BCG9842_B4508 BCG9842_B4508 BCG9842_B4508 763989 764297 + conserved hypothetical protein gene gene781 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4508 BCG9842_B4509 BCG9842_B4509 BCG9842_B4509 763415 763942 + extracellular metalloprotease an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a premature stop gene gene780 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4509 BCG9842_B4510 BCG9842_B4510 BCG9842_B4510 763073 763363 + extracellular metalloprotease protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a premature stop gene gene779 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4510 BCG9842_B4511 BCG9842_B4511 BCG9842_B4511 761528 762799 + alkaline ceramidase domain protein gene gene778 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4511 BCG9842_B4512 BCG9842_B4512 spoVR spoVR 760004 761419 + stage V sporulation protein R identified by match to protein family HMM PF04293 gene gene777 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4512 BCG9842_B4513 BCG9842_B4513 BCG9842_B4513 759329 759889 + nitroreductase family protein identified by match to protein family HMM PF00881 gene gene776 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4513 BCG9842_B4514 BCG9842_B4514 BCG9842_B4514 758494 759090 - conserved hypothetical protein gene gene775 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4514 BCG9842_B4515 BCG9842_B4515 BCG9842_B4515 756851 758368 - spore germination protein%2C GerA family identified by match to protein family HMM PF03323 gene gene774 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4515 BCG9842_B4516 BCG9842_B4516 BCG9842_B4516 755772 756854 - GerAC identified by match to protein family HMM PF05504%3B match to protein family HMM TIGR02887 gene gene773 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4516 BCG9842_B4517 BCG9842_B4517 BCG9842_B4517 754646 755755 - GerAB identified by match to protein family HMM PF03845%3B match to protein family HMM TIGR00912 gene gene772 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4517 BCG9842_B4518 BCG9842_B4518 BCG9842_B4518 754088 754600 - putative lipoprotein gene gene771 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4518 BCG9842_B4519 BCG9842_B4519 BCG9842_B4519 753719 753967 - conserved hypothetical protein gene gene770 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4519 BCG9842_B4520 BCG9842_B4520 BCG9842_B4520 753134 753553 - putative disulfide bond formation protein B identified by match to protein family HMM PF02600 gene gene769 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4520 BCG9842_B4521 BCG9842_B4521 BCG9842_B4521 752669 753121 - thioredoxin identified by match to protein family HMM PF00085 gene gene768 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4521 BCG9842_B4522 BCG9842_B4522 BCG9842_B4522 752381 752596 - conserved hypothetical protein identified by match to protein family HMM PF07561 gene gene767 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4522 BCG9842_B4523 BCG9842_B4523 BCG9842_B4523 752096 752347 + putative membrane protein gene gene766 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4523 BCG9842_B4524 BCG9842_B4524 BCG9842_B4524 751231 751992 + conserved domain protein identified by match to protein family HMM PF03734 gene gene765 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4524 BCG9842_B4525 BCG9842_B4525 BCG9842_B4525 750298 751164 + oxidoreductase%2C short chain dehydrogenase/reductase family identified by match to protein family HMM PF00106 gene gene764 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4525 BCG9842_B4526 BCG9842_B4526 BCG9842_B4526 748795 750096 - xanthine/uracil permease family protein identified by match to protein family HMM PF00860%3B match to protein family HMM PF00916 gene gene763 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4526 BCG9842_B4527 BCG9842_B4527 BCG9842_B4527 748494 748697 + hypothetical protein identified by glimmer%3B putative gene gene762 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4527 BCG9842_B4528 BCG9842_B4528 BCG9842_B4528 747513 748367 + phospholipase%2C patatin family identified by match to protein family HMM PF01734 gene gene761 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4528 BCG9842_B4529 BCG9842_B4529 BCG9842_B4529 746923 747384 + transcriptional regulator%2C MarR family identified by match to protein family HMM PF01047 gene gene760 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4529 BCG9842_B4530 BCG9842_B4530 BCG9842_B4530 745601 746782 - major facilitator family transporter identified by match to protein family HMM PF07690 gene gene759 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4530 BCG9842_B4531 BCG9842_B4531 kdpD kdpD 744433 745578 + sensor histidine kinase KdpD identified by match to protein family HMM PF00582%3B match to protein family HMM PF02702 gene gene758 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4531 BCG9842_B4532 BCG9842_B4532 kdpC kdpC 743786 744367 + potassium-transporting ATPase%2C C subunit identified by match to protein family HMM PF02669%3B match to protein family HMM TIGR00681 gene gene757 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4532 BCG9842_B4533 BCG9842_B4533 kdpB kdpB 741676 743769 + potassium-transporting ATPase%2C B subunit identified by match to protein family HMM PF00122%3B match to protein family HMM PF00702%3B match to protein family HMM TIGR01494%3B match to protein family HMM TIGR01497 gene gene756 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4533 BCG9842_B4534 BCG9842_B4534 kdpA kdpA 739998 741665 + potassium-transporting ATPase%2C A subunit identified by match to protein family HMM PF03814%3B match to protein family HMM TIGR00680 gene gene755 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4534 BCG9842_B4535 BCG9842_B4535 BCG9842_B4535 739761 739901 + hypothetical protein identified by glimmer%3B putative gene gene754 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4535 BCG9842_B4537 BCG9842_B4537 BCG9842_B4537 739061 739291 + hypothetical protein identified by glimmer%3B putative gene gene753 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4537 BCG9842_B4538 BCG9842_B4538 BCG9842_B4538 738658 739044 + hypothetical protein identified by glimmer%3B putative gene gene752 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4538 BCG9842_B4540 BCG9842_B4540 thiD1 thiD1 737519 738331 + phosphomethylpyrimidine kinase identified by match to protein family HMM PF08543%3B match to protein family HMM TIGR00097 gene gene751 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4540 BCG9842_B4541 BCG9842_B4541 BCG9842_B4541 736484 737503 + hesA/moeB/thiF family protein identified by match to protein family HMM PF00899%3B match to protein family HMM PF05237%3B match to protein family HMM TIGR02356 gene gene750 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4541 BCG9842_B4542 BCG9842_B4542 thiG thiG 735721 736491 + thiazole biosynthesis protein ThiG identified by match to protein family HMM PF05690 gene gene749 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4542 BCG9842_B4543 BCG9842_B4543 thiS thiS 735515 735718 + thiamine biosynthesis protein ThiS identified by match to protein family HMM PF02597%3B match to protein family HMM TIGR01683 gene gene748 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4543 BCG9842_B4544 BCG9842_B4544 thiO thiO 734390 735499 + glycine oxidase ThiO identified by match to protein family HMM PF01266%3B match to protein family HMM PF01494%3B match to protein family HMM TIGR02352 gene gene747 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4544 BCG9842_B4545 BCG9842_B4545 tenI tenI 733777 734397 + regulatory protein TenI identified by match to protein family HMM PF02581 gene gene746 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4545 BCG9842_B4546 BCG9842_B4546 BCG9842_B4546 732765 733766 + putative ABC transporter%2C substrate-binding protein identified by match to protein family HMM PF09084 gene gene745 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4546 BCG9842_B4547 BCG9842_B4547 BCG9842_B4547 732013 732768 + putative ABC transporter%2C permease protein identified by match to protein family HMM PF00528 gene gene744 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4547 BCG9842_B4548 BCG9842_B4548 BCG9842_B4548 731267 732016 + ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005 gene gene743 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4548 BCG9842_B4549 BCG9842_B4549 BCG9842_B4549 730603 731298 + putative transcriptional activator TenA identified by match to protein family HMM PF03070 gene gene742 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4549 BCG9842_B4552 BCG9842_B4552 BCG9842_B4552 728822 729976 - peptidase%2C M23/M37 family identified by match to protein family HMM PF01551%3B match to protein family HMM PF06347%3B match to protein family HMM PF08239 gene gene741 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4552 BCG9842_B4553 BCG9842_B4553 BCG9842_B4553 728484 728816 - conserved domain protein gene gene740 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4553 BCG9842_B4554 BCG9842_B4554 BCG9842_B4554 727608 728243 + conserved hypothetical protein gene gene739 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4554 BCG9842_B4556 BCG9842_B4556 BCG9842_B4556 725772 727586 + group II intron-encoded protein LtrA identified by match to protein family HMM PF00078%3B match to protein family HMM PF01348 gene gene738 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4556 BCG9842_B4557 BCG9842_B4557 BCG9842_B4557 725653 725766 + hypothetical protein identified by glimmer%3B putative gene gene737 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4557 BCG9842_B4558 BCG9842_B4558 BCG9842_B4558 724564 725184 + conserved hypothetical protein gene gene736 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4558 BCG9842_B4559 BCG9842_B4559 BCG9842_B4559 723823 724242 + CBS domain protein identified by match to protein family HMM PF00571 gene gene735 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4559 BCG9842_B4560 BCG9842_B4560 BCG9842_B4560 723545 723697 + tRNA-Glu tRNA gene734 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4560 BCG9842_B4561 BCG9842_B4561 BCG9842_B4561 723460 723538 + tRNA-Ile tRNA gene733 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4561 BCG9842_B4562 BCG9842_B4562 BCG9842_B4562 723380 723455 + tRNA-Trp tRNA gene732 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4562 BCG9842_B4563 BCG9842_B4563 BCG9842_B4563 723301 723378 + tRNA-Thr tRNA gene731 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4563 BCG9842_B4564 BCG9842_B4564 BCG9842_B4564 723215 723292 + tRNA-Phe tRNA gene730 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4564 BCG9842_B4565 BCG9842_B4565 BCG9842_B4565 723131 723208 + tRNA-Asp tRNA gene729 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4565 BCG9842_B4566 BCG9842_B4566 BCG9842_B4566 723051 723129 + tRNA-Met tRNA gene728 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4566 BCG9842_B4567 BCG9842_B4567 BCG9842_B4567 722939 723031 + tRNA-Ser tRNA gene727 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4567 BCG9842_B4568 BCG9842_B4568 BCG9842_B4568 722792 722884 + tRNA-Ser tRNA gene726 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4568 BCG9842_B4569 BCG9842_B4569 BCG9842_B4569 722698 722775 + tRNA-Ala tRNA gene725 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4569 BCG9842_B4570 BCG9842_B4570 BCG9842_B4570 722610 722686 + tRNA-Pro tRNA gene724 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4570 BCG9842_B4571 BCG9842_B4571 BCG9842_B4571 722525 722603 + tRNA-Arg tRNA gene723 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4571 BCG9842_B4572 BCG9842_B4572 BCG9842_B4572 722433 722523 + tRNA-Leu tRNA gene722 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4572 BCG9842_B4573 BCG9842_B4573 BCG9842_B4573 722343 722417 + tRNA-Gly tRNA gene721 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4573 BCG9842_B4574 BCG9842_B4574 BCG9842_B4574 722232 722317 + tRNA-Leu tRNA gene720 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4574 BCG9842_B4575 BCG9842_B4575 BCG9842_B4575 722142 722217 + tRNA-Lys tRNA gene719 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4575 BCG9842_B4576 BCG9842_B4576 BCG9842_B4576 722062 722138 + tRNA-Gln tRNA gene718 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4576 BCG9842_B4577 BCG9842_B4577 BCG9842_B4577 721968 722051 + tRNA-Tyr tRNA gene717 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4577 BCG9842_B4578 BCG9842_B4578 BCG9842_B4578 721883 721960 + tRNA-Val tRNA gene716 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4578 BCG9842_B4579 BCG9842_B4579 rrf_2 rrf_2 721763 721878 + 5S ribosomal RNA rRNA gene715 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4579 BCG9842_B4580 BCG9842_B4580 rrl_2 rrl_2 718755 721662 + 23S ribosomal RNA rRNA gene714 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4580 BCG9842_B4582 BCG9842_B4582 rrs_2 rrs_2 717068 718576 + 16S ribosomal RNA rRNA gene713 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4582 BCG9842_B4583 BCG9842_B4583 BCG9842_B4583 713338 716280 - transporter%2C AcrB/AcrD/AcrF family identified by match to protein family HMM PF00873 gene gene712 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4583 BCG9842_B4584 BCG9842_B4584 BCG9842_B4584 712769 713293 + conserved hypothetical protein gene gene711 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4584 BCG9842_B4585 BCG9842_B4585 BCG9842_B4585 711712 712632 + putative phosphate ABC transporter%2C permease protein identified by match to protein family HMM PF00528%3B match to protein family HMM TIGR00974 gene gene710 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4585 BCG9842_B4586 BCG9842_B4586 BCG9842_B4586 710819 711709 + putative phosphate ABC transporter%2C permease protein identified by match to protein family HMM PF00528%3B match to protein family HMM TIGR02138 gene gene709 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4586 BCG9842_B4587 BCG9842_B4587 BCG9842_B4587 709846 710748 + putative phosphate ABC transporter%2C phosphate-binding protein identified by match to protein family HMM PF01547%3B match to protein family HMM TIGR02136 gene gene708 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4587 BCG9842_B4588 BCG9842_B4588 BCG9842_B4588 709079 709336 - putative ferrous iron transport protein A identified by match to protein family HMM PF04023 gene gene707 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4588 BCG9842_B4589 BCG9842_B4589 BCG9842_B4589 708360 709082 - ferrous iron transport protein B identified by match to protein family HMM PF01926%3B match to protein family HMM TIGR00231 gene gene706 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4589 BCG9842_B4590 BCG9842_B4590 BCG9842_B4590 706982 708382 - ferrous iron transport protein B identified by match to protein family HMM PF02421%3B match to protein family HMM PF07664%3B match to protein family HMM PF07670 gene gene705 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4590 BCG9842_B4591 BCG9842_B4591 BCG9842_B4591 706782 706919 + hypothetical protein identified by glimmer%3B putative gene gene704 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4591 BCG9842_B4592 BCG9842_B4592 gerLC gerLC 705628 706770 + spore germination protein GerLC identified by match to protein family HMM PF05504%3B match to protein family HMM TIGR02887 gene gene703 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4592 BCG9842_B4593 BCG9842_B4593 gerLB gerLB 704496 705620 + spore germination protein GerLB identified by match to protein family HMM PF03845%3B match to protein family HMM TIGR00912 gene gene702 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4593 BCG9842_B4594 BCG9842_B4594 gerLA gerLA 703017 704495 + spore germination protein GerLA identified by match to protein family HMM PF03323 gene gene701 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4594 BCG9842_B4595 BCG9842_B4595 BCG9842_B4595 701443 702915 + sodium/solute symporter family protein identified by match to protein family HMM PF00474 gene gene700 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4595 BCG9842_B4596 BCG9842_B4596 BCG9842_B4596 701249 701446 + conserved hypothetical protein gene gene699 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4596 BCG9842_B4597 BCG9842_B4597 BCG9842_B4597 700072 701247 + N-acyl-L-amino acid amidohydrolase identified by match to protein family HMM PF01546%3B match to protein family HMM PF07687%3B match to protein family HMM TIGR01891 gene gene698 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4597 BCG9842_B4598 BCG9842_B4598 BCG9842_B4598 699229 699939 + conserved hypothetical protein gene gene697 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4598 BCG9842_B4599 BCG9842_B4599 BCG9842_B4599 697438 698853 - amino-acid permease RocC identified by match to protein family HMM PF00324 gene gene696 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4599 BCG9842_B4600 BCG9842_B4600 qoxA qoxA 696280 697155 - cytochrome aa3 quinol oxidase%2C subunit II identified by match to protein family HMM PF02790%3B match to protein family HMM TIGR01432 gene gene695 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4600 BCG9842_B4601 BCG9842_B4601 qoxB qoxB 694312 696246 - cytochrome aa3 quinol oxidase%2C subunit I identified by match to protein family HMM PF00115%3B match to protein family HMM TIGR02882 gene gene694 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4601 BCG9842_B4602 BCG9842_B4602 qoxC qoxC 693696 694298 - cytochrome aa3 quinol oxidase%2C subunit III identified by match to protein family HMM PF00510%3B match to protein family HMM TIGR02897 gene gene693 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4602 BCG9842_B4603 BCG9842_B4603 qoxD qoxD 693384 693695 - cytochrome aa3 quinol oxidase%2C subunit IV identified by match to protein family HMM PF03626%3B match to protein family HMM TIGR02901 gene gene692 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4603 BCG9842_B4604 BCG9842_B4604 BCG9842_B4604 691334 693163 - sodium/hydrogen exchanger family protein/TrkA domain protein identified by match to protein family HMM PF00999%3B match to protein family HMM PF02080%3B match to protein family HMM PF02254 gene gene691 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4604 BCG9842_B4605 BCG9842_B4605 BCG9842_B4605 691023 691244 - hypothetical protein identified by glimmer%3B putative gene gene690 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4605 BCG9842_B4606 BCG9842_B4606 BCG9842_B4606 690571 691008 - acetyltransferase%2C GNAT family identified by match to protein family HMM PF00583 gene gene689 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4606 BCG9842_B4607 BCG9842_B4607 BCG9842_B4607 690103 690531 + hypothetical protein identified by glimmer%3B putative gene gene688 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4607 BCG9842_B4608 BCG9842_B4608 BCG9842_B4608 689898 690098 + DNA-binding protein identified by match to protein family HMM PF01381 gene gene687 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4608 BCG9842_B4609 BCG9842_B4609 BCG9842_B4609 688406 689698 + xanthine/uracil permease family protein identified by match to protein family HMM PF00860%3B match to protein family HMM PF00916 gene gene686 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4609 BCG9842_B4610 BCG9842_B4610 BCG9842_B4610 686734 688125 - amino acid permease family protein identified by match to protein family HMM PF00324 gene gene685 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4610 BCG9842_B4611 BCG9842_B4611 BCG9842_B4611 685005 686552 - conserved hypothetical protein gene gene684 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4611 BCG9842_B4612 BCG9842_B4612 BCG9842_B4612 683248 684969 + putative membrane protein gene gene683 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4612 BCG9842_B4613 BCG9842_B4613 brnQ1 brnQ1 681812 683107 + branched-chain amino acid transport system II carrier protein identified by match to protein family HMM PF05525%3B match to protein family HMM TIGR00796 gene gene682 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4613 BCG9842_B4614 BCG9842_B4614 BCG9842_B4614 681700 681843 + conserved hypothetical protein gene gene681 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4614 BCG9842_B4615 BCG9842_B4615 BCG9842_B4615 680167 681552 - proton/peptide symporter family protein identified by match to protein family HMM PF00854%3B match to protein family HMM PF07690%3B match to protein family HMM TIGR00924 gene gene680 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4615 BCG9842_B4616 BCG9842_B4616 BCG9842_B4616 679099 680136 + conserved hypothetical protein gene gene679 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4616 BCG9842_B4617 BCG9842_B4617 BCG9842_B4617 678327 678959 + LPXTG-site transpeptidase family protein identified by match to protein family HMM PF04203%3B match to protein family HMM TIGR01076 gene gene678 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4617 BCG9842_B4618 BCG9842_B4618 BCG9842_B4618 677737 678210 + conserved hypothetical protein gene gene677 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4618 BCG9842_B4619 BCG9842_B4619 BCG9842_B4619 677526 677744 + DNA-binding protein identified by match to protein family HMM PF01381 gene gene676 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4619 BCG9842_B4620 BCG9842_B4620 BCG9842_B4620 676140 677414 + conserved hypothetical protein identified by match to protein family HMM PF06725 gene gene675 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4620 BCG9842_B4621 BCG9842_B4621 BCG9842_B4621 674978 675919 - methyl-accepting chemotaxis protein identified by match to protein family HMM PF00015 gene gene674 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4621 BCG9842_B4622 BCG9842_B4622 BCG9842_B4622 674029 674841 - undecaprenol kinase family protein identified by match to protein family HMM PF02673 gene gene673 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4622 BCG9842_B4623 BCG9842_B4623 BCG9842_B4623 673562 673687 - conserved hypothetical protein gene gene672 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4623 BCG9842_B4624 BCG9842_B4624 BCG9842_B4624 673231 673434 + hypothetical protein identified by glimmer%3B putative gene gene671 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4624 BCG9842_B4625 BCG9842_B4625 BCG9842_B4625 671908 673059 - putative membrane protein identified by match to protein family HMM PF04892 gene gene670 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4625 BCG9842_B4626 BCG9842_B4626 BCG9842_B4626 670499 671803 + flavin-dependent dehydrogenase identified by match to protein family HMM PF01565%3B match to protein family HMM PF04030%3B match to protein family HMM TIGR01679 gene gene669 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4626 BCG9842_B4627 BCG9842_B4627 BCG9842_B4627 669339 670511 + conserved hypothetical protein gene gene668 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4627 BCG9842_B4628 BCG9842_B4628 sph sph 668230 669231 + sphingomyelin phosphodiesterase C identified by match to protein family HMM PF03372%3B match to protein family HMM TIGR03395 gene gene667 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4628 BCG9842_B4629 BCG9842_B4629 plC plC 667302 668153 + phospholipase C identified by match to protein family HMM PF00882 gene gene666 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4629 BCG9842_B4630 BCG9842_B4630 BCG9842_B4630 666704 667048 + conserved hypothetical protein identified by match to protein family HMM PF07885 gene gene665 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4630 BCG9842_B4631 BCG9842_B4631 BCG9842_B4631 665533 666585 + oxidoreductase%2C zinc-binding dehydrogenase family identified by match to protein family HMM PF00107%3B match to protein family HMM PF08240 gene gene664 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4631 BCG9842_B4632 BCG9842_B4632 BCG9842_B4632 664153 665307 - bicyclomycin resistance protein identified by match to protein family HMM PF00083%3B match to protein family HMM PF07690 gene gene663 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4632 BCG9842_B4633 BCG9842_B4633 BCG9842_B4633 663807 664136 + conserved hypothetical protein gene gene662 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4633 BCG9842_B4634 BCG9842_B4634 BCG9842_B4634 663441 663785 + conserved hypothetical protein gene gene661 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4634 BCG9842_B4635 BCG9842_B4635 inhA inhA 660723 663122 + immune inhibitor A metalloprotease identified by match to protein family HMM PF05547%3B match to protein family HMM TIGR03296 gene gene660 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4635 BCG9842_B4636 BCG9842_B4636 BCG9842_B4636 659693 660340 + putative transaldolase identified by match to protein family HMM PF00923%3B match to protein family HMM TIGR00875 gene gene659 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4636 BCG9842_B4637 BCG9842_B4637 rbsB rbsB 658732 659658 + ribose ABC transporter%2C ribose-binding protein identified by match to protein family HMM PF00532 gene gene658 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4637 BCG9842_B4638 BCG9842_B4638 rbsC rbsC 657782 658717 + ribose ABC transporter%2C permease protein identified by match to protein family HMM PF02653 gene gene657 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4638 BCG9842_B4639 BCG9842_B4639 rbsA rbsA 656295 657779 + ribose ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005 gene gene656 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4639 BCG9842_B4640 BCG9842_B4640 rbsD rbsD 655881 656276 + ribose ABC transporter protein identified by match to protein family HMM PF05025 gene gene655 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4640 BCG9842_B4641 BCG9842_B4641 rbsK rbsK 654988 655884 + ribokinase identified by match to protein family HMM PF00294%3B match to protein family HMM TIGR02152 gene gene654 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4641 BCG9842_B4642 BCG9842_B4642 rbsR rbsR 654003 654974 + ribose operon repressor identified by match to protein family HMM PF00356%3B match to protein family HMM PF00532 gene gene653 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4642 BCG9842_B4643 BCG9842_B4643 BCG9842_B4643 652252 653865 + putative multidrug resistance protein identified by match to protein family HMM PF07690%3B match to protein family HMM TIGR00711 gene gene652 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4643 BCG9842_B4644 BCG9842_B4644 BCG9842_B4644 651774 652232 + transcriptional regulator%2C MarR family identified by match to protein family HMM PF01047 gene gene651 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4644 BCG9842_B4645 BCG9842_B4645 BCG9842_B4645 651482 651601 - hypothetical protein identified by glimmer%3B putative gene gene650 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4645 BCG9842_B4646 BCG9842_B4646 glpT glpT 650155 651504 - glycerol-3-phosphate transporter identified by match to protein family HMM PF07690%3B match to protein family HMM TIGR00712%3B match to protein family HMM TIGR00881 gene gene649 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4646 BCG9842_B4647 BCG9842_B4647 BCG9842_B4647 649920 650036 + hypothetical protein identified by glimmer%3B putative gene gene648 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4647 BCG9842_B4648 BCG9842_B4648 BCG9842_B4648 649295 649717 + universal stress protein family identified by match to protein family HMM PF00582 gene gene647 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4648 BCG9842_B4649 BCG9842_B4649 BCG9842_B4649 647778 649229 + sulfate permease family protein identified by match to protein family HMM PF00860%3B match to protein family HMM PF00916 gene gene646 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4649 BCG9842_B4650 BCG9842_B4650 BCG9842_B4650 646374 647621 + putative lipoprotein gene gene645 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4650 BCG9842_B4651 BCG9842_B4651 BCG9842_B4651 645521 646198 - DNA-binding response regulator identified by match to protein family HMM PF00072%3B match to protein family HMM PF00486 gene gene644 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4651 BCG9842_B4652 BCG9842_B4652 BCG9842_B4652 644118 645509 - sensor histidine kinase identified by match to protein family HMM PF00512%3B match to protein family HMM PF00672%3B match to protein family HMM PF02518 gene gene643 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4652 BCG9842_B4653 BCG9842_B4653 BCG9842_B4653 643432 643953 + dihydrofolate reductase family protein identified by match to protein family HMM PF01872 gene gene642 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4653 BCG9842_B4654 BCG9842_B4654 BCG9842_B4654 642370 643323 - conserved hypothetical protein identified by match to protein family HMM PF08279 gene gene641 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4654 BCG9842_B4655 BCG9842_B4655 BCG9842_B4655 640910 642328 + group-specific protein gene gene640 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4655 BCG9842_B4656 BCG9842_B4656 BCG9842_B4656 640387 640944 + RNA polymerase sigma-70 factor%2C ECF subfamily identified by match to protein family HMM PF04542%3B match to protein family HMM PF04545%3B match to protein family HMM PF08281%3B match to protein family HMM TIGR02937 gene gene639 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4656 BCG9842_B4657 BCG9842_B4657 BCG9842_B4657 639773 640207 + HIT family protein identified by match to protein family HMM PF01230 gene gene638 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4657 BCG9842_B4658 BCG9842_B4658 BCG9842_B4658 639332 639709 + conserved hypothetical protein identified by match to protein family HMM PF02566 gene gene637 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4658 BCG9842_B4659 BCG9842_B4659 BCG9842_B4659 637927 639357 + amino acid ABC transporter%2C permease protein identified by match to protein family HMM PF00324 gene gene636 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4659 BCG9842_B4660 BCG9842_B4660 BCG9842_B4660 637078 637722 + amino acid ABC transporter%2C permease protein identified by match to protein family HMM PF00528%3B match to protein family HMM TIGR01726 gene gene635 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4660 BCG9842_B4661 BCG9842_B4661 BCG9842_B4661 636421 637077 + amino acid ABC transporter%2C permease protein identified by match to protein family HMM PF00528%3B match to protein family HMM TIGR01726 gene gene634 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4661 BCG9842_B4662 BCG9842_B4662 BCG9842_B4662 635503 636333 + amino acid ABC transporter%2C amino acid-binding protein identified by match to protein family HMM PF00497 gene gene633 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4662 BCG9842_B4663 BCG9842_B4663 BCG9842_B4663 634762 635490 + amino acid ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005 gene gene632 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4663 BCG9842_B4664 BCG9842_B4664 BCG9842_B4664 633164 634627 + sodium/alanine symporter family protein identified by match to protein family HMM PF01235%3B match to protein family HMM TIGR00835 gene gene631 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4664 BCG9842_B4665 BCG9842_B4665 BCG9842_B4665 632036 633007 + conserved hypothetical protein identified by match to protein family HMM PF01636 gene gene630 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4665 BCG9842_B4666 BCG9842_B4666 gerKA gerKA 630345 631847 - spore germination protein GerKA identified by match to protein family HMM PF03323 gene gene629 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4666 BCG9842_B4667 BCG9842_B4667 gerKB gerKB 629258 630364 - spore germination protein GerKB identified by match to protein family HMM PF03845%3B match to protein family HMM TIGR00912 gene gene628 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4667 BCG9842_B4668 BCG9842_B4668 gerKC gerKC 628153 629277 - spore germination protein GerKC identified by match to protein family HMM PF05504%3B match to protein family HMM TIGR02887 gene gene627 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4668 BCG9842_B4669 BCG9842_B4669 treC treC 626459 628120 + alpha%2Calpha-phosphotrehalase identified by match to protein family HMM PF00128%3B match to protein family HMM TIGR02403 gene gene626 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4669 BCG9842_B4670 BCG9842_B4670 treB treB 625018 626445 + PTS system%2C trehalose-specific IIBC component identified by match to protein family HMM PF00367%3B match to protein family HMM PF02378%3B match to protein family HMM TIGR00826%3B match to protein family HMM TIGR01992 gene gene625 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4670 BCG9842_B4671 BCG9842_B4671 treR treR 624165 624875 + trehalose operon repressor identified by match to protein family HMM PF00392%3B match to protein family HMM PF07702%3B match to protein family HMM TIGR02404 gene gene624 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4671 BCG9842_B4672 BCG9842_B4672 BCG9842_B4672 622315 623712 - amino acid permease family protein identified by match to protein family HMM PF00324%3B match to protein family HMM PF03222 gene gene623 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4672 BCG9842_B4673 BCG9842_B4673 BCG9842_B4673 620580 622283 + sensory box/GGDEF family protein identified by match to protein family HMM PF00563%3B match to protein family HMM PF00989%3B match to protein family HMM PF00990%3B match to protein family HMM PF08447%3B match to protein family HMM PF08448%3B match to protein family HMM TIGR00229%3B match to protein family HMM TIGR00254 gene gene622 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4673 BCG9842_B4674 BCG9842_B4674 BCG9842_B4674 619720 620097 + conserved hypothetical protein gene gene621 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4674 BCG9842_B4675 BCG9842_B4675 cls1 cls1 617977 619506 - cardiolipin synthetase identified by match to protein family HMM PF00614 gene gene620 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4675 BCG9842_B4676 BCG9842_B4676 BCG9842_B4676 616956 617849 - putative norQ protein identified by match to protein family HMM PF07726%3B match to protein family HMM PF07728 gene gene619 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4676 BCG9842_B4677 BCG9842_B4677 BCG9842_B4677 615069 616952 - conserved hypothetical protein gene gene618 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4677 BCG9842_B4678 BCG9842_B4678 BCG9842_B4678 614609 615031 + mutT/nudix family protein identified by match to protein family HMM PF00293 gene gene617 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4678 BCG9842_B4679 BCG9842_B4679 BCG9842_B4679 613584 614549 + conserved hypothetical protein identified by match to protein family HMM PF01073%3B match to protein family HMM PF01370%3B match to protein family HMM PF02719%3B match to protein family HMM PF07993 gene gene616 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4679 BCG9842_B4680 BCG9842_B4680 BCG9842_B4680 612349 613539 + putative 8-amino-7-oxononanoate synthase identified by match to protein family HMM PF00155%3B match to protein family HMM TIGR01825 gene gene615 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4680 BCG9842_B4681 BCG9842_B4681 BCG9842_B4681 611404 612135 - conserved hypothetical protein identified by match to protein family HMM PF08241%3B match to protein family HMM PF08242 gene gene614 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4681 BCG9842_B4682 BCG9842_B4682 BCG9842_B4682 610551 611372 + ferric enterobactin transport ATP-binding protein FepC identified by match to protein family HMM PF00005 gene gene613 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4682 BCG9842_B4683 BCG9842_B4683 BCG9842_B4683 609480 610538 + iron compound ABC transporter%2C permease protein identified by match to protein family HMM PF01032 gene gene612 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4683 BCG9842_B4684 BCG9842_B4684 BCG9842_B4684 608479 609483 + iron compound ABC transporter%2C permease protein identified by match to protein family HMM PF01032 gene gene611 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4684 BCG9842_B4685 BCG9842_B4685 BCG9842_B4685 607338 608306 - iron compound ABC transporter%2C iron compound-binding protein identified by match to protein family HMM PF01497 gene gene610 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4685 BCG9842_B4686 BCG9842_B4686 BCG9842_B4686 605608 606957 - peptide transport protein%2C POT family identified by match to protein family HMM PF00854%3B match to protein family HMM PF07690%3B match to protein family HMM TIGR00924 gene gene609 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4686 BCG9842_B4687 BCG9842_B4687 BCG9842_B4687 605391 605570 + small acid-soluble spore protein%2C H-type identified by match to protein family HMM PF08141%3B match to protein family HMM TIGR02861 gene gene608 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4687 BCG9842_B4688 BCG9842_B4688 BCG9842_B4688 604912 605199 + transcriptional regulator%2C ArsR family identified by match to protein family HMM PF01022 gene gene607 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4688 BCG9842_B4689 BCG9842_B4689 BCG9842_B4689 604435 604551 + hypothetical protein identified by glimmer%3B putative gene gene606 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4689 BCG9842_B4690 BCG9842_B4690 lldP1 lldP1 602345 603964 - L-lactate permease identified by match to protein family HMM PF02652%3B match to protein family HMM TIGR00795 gene gene605 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4690 BCG9842_B4691 BCG9842_B4691 aspA1 aspA1 600872 602305 + aspartate ammonia-lyase identified by match to protein family HMM PF00206%3B match to protein family HMM TIGR00839 gene gene604 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4691 BCG9842_B4692 BCG9842_B4692 BCG9842_B4692 599421 600698 + magnesium and cobalt efflux protein CorC identified by match to protein family HMM PF00571%3B match to protein family HMM PF01595%3B match to protein family HMM PF03471 gene gene603 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4692 BCG9842_B4693 BCG9842_B4693 BCG9842_B4693 598905 599291 + glyoxylase family protein identified by match to protein family HMM PF00903 gene gene602 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4693 BCG9842_B4694 BCG9842_B4694 BCG9842_B4694 597635 598813 - nucleoside transporter%2C NupC family identified by match to protein family HMM PF01773%3B match to protein family HMM PF07662%3B match to protein family HMM PF07670%3B match to protein family HMM TIGR00804 gene gene601 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4694 BCG9842_B4695 BCG9842_B4695 BCG9842_B4695 596287 597303 - transcription antiterminator%2C LytR family identified by match to protein family HMM PF03816%3B match to protein family HMM TIGR00350 gene gene600 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4695 BCG9842_B4696 BCG9842_B4696 BCG9842_B4696 594790 596052 - vancomycin B-type resistance protein VanW identified by match to protein family HMM PF04294 gene gene599 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4696 BCG9842_B4697 BCG9842_B4697 BCG9842_B4697 594475 594747 + hypothetical protein identified by glimmer%3B putative gene gene598 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4697 BCG9842_B4698 BCG9842_B4698 BCG9842_B4698 593940 594458 + putative lipoprotein gene gene597 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4698 BCG9842_B4699 BCG9842_B4699 BCG9842_B4699 592993 593541 - putative membrane protein identified by match to protein family HMM PF09335 gene gene596 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4699 BCG9842_B4700 BCG9842_B4700 BCG9842_B4700 591229 592929 + neutral protease Npr599 identified by match to protein family HMM PF01447%3B match to protein family HMM PF02868%3B match to protein family HMM PF03413%3B match to protein family HMM PF07504 gene gene595 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4700 BCG9842_B4701 BCG9842_B4701 BCG9842_B4701 590932 591060 + conserved hypothetical protein gene gene594 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4701 BCG9842_B4702 BCG9842_B4702 BCG9842_B4702 589658 590917 + transcriptional activator identified by match to protein family HMM PF00515%3B match to protein family HMM PF01381%3B match to protein family HMM PF07719 gene gene593 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4702 BCG9842_B4703 BCG9842_B4703 BCG9842_B4703 587996 589459 - putative nicotinate phosphoribosyltransferase identified by match to protein family HMM PF04095%3B match to protein family HMM TIGR01513 gene gene592 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4703 BCG9842_B4704 BCG9842_B4704 BCG9842_B4704 585426 587792 + heavy metal-transporting ATPase identified by match to protein family HMM PF00122%3B match to protein family HMM PF00403%3B match to protein family HMM PF00702%3B match to protein family HMM TIGR01494%3B match to protein family HMM TIGR01512%3B match to protein family HMM TIGR01525 gene gene591 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4704 BCG9842_B4705 BCG9842_B4705 BCG9842_B4705 585025 585402 + transcriptional regulator%2C ArsR family identified by match to protein family HMM PF01022 gene gene590 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4705 BCG9842_B4706 BCG9842_B4706 BCG9842_B4706 583294 584709 + alanine permease identified by match to protein family HMM PF00324 gene gene589 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4706 BCG9842_B4707 BCG9842_B4707 ald1 ald1 582057 583190 + alanine dehydrogenase identified by match to protein family HMM PF01262%3B match to protein family HMM PF01488%3B match to protein family HMM PF05222%3B match to protein family HMM TIGR00518 gene gene588 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4707 BCG9842_B4708 BCG9842_B4708 BCG9842_B4708 579816 581687 + glycerophosphoryl diester phosphodiesterase family protein identified by match to protein family HMM PF03009 gene gene587 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4708 BCG9842_B4709 BCG9842_B4709 BCG9842_B4709 579178 579660 + conserved hypothetical protein identified by match to protein family HMM PF07849 gene gene586 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4709 BCG9842_B4710 BCG9842_B4710 BCG9842_B4710 576229 579165 + molybdopterin oxidoreductase family protein identified by match to protein family HMM PF00037%3B match to protein family HMM PF00111%3B match to protein family HMM PF00384%3B match to protein family HMM PF01568%3B match to protein family HMM PF04879%3B match to protein family HMM TIGR01591 gene gene585 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4710 BCG9842_B4711 BCG9842_B4711 fdhD1 fdhD1 575122 575928 - formate dehydrogenase accessory protein FdhD identified by match to protein family HMM PF02634%3B match to protein family HMM TIGR00129 gene gene584 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4711 BCG9842_B4712 BCG9842_B4712 BCG9842_B4712 574388 574894 - acetyltransferase%2C GNAT family identified by match to protein family HMM PF00583 gene gene583 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4712 BCG9842_B4713 BCG9842_B4713 BCG9842_B4713 574011 574124 - conserved hypothetical protein gene gene582 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4713 BCG9842_B4714 BCG9842_B4714 BCG9842_B4714 573826 573948 + conserved hypothetical protein gene gene581 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4714 BCG9842_B4715 BCG9842_B4715 BCG9842_B4715 571884 573239 - transposase%2C IS605 family identified by match to protein family HMM PF07282%3B match to protein family HMM TIGR01766 gene gene580 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4715 BCG9842_B4716 BCG9842_B4716 BCG9842_B4716 570871 571542 - DNA-binding response regulator identified by match to protein family HMM PF00072%3B match to protein family HMM PF00486 gene gene579 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4716 BCG9842_B4717 BCG9842_B4717 BCG9842_B4717 569351 570805 - sensor histidine kinase identified by match to protein family HMM PF00512%3B match to protein family HMM PF00672%3B match to protein family HMM PF02518 gene gene578 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4717 BCG9842_B4718 BCG9842_B4718 BCG9842_B4718 568693 569205 - acetyltransferase%2C GNAT family identified by match to protein family HMM PF00583 gene gene577 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4718 BCG9842_B4719 BCG9842_B4719 BCG9842_B4719 567260 568660 + transcriptional regulator%2C GntR family identified by match to protein family HMM PF00155%3B match to protein family HMM PF00392 gene gene576 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4719 BCG9842_B4720 BCG9842_B4720 BCG9842_B4720 566213 567139 - transporter%2C Drug/Metabolite Exporter family identified by match to protein family HMM PF00892 gene gene575 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4720 BCG9842_B4721 BCG9842_B4721 BCG9842_B4721 565493 566017 - putative lipoprotein gene gene574 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4721 BCG9842_B4722 BCG9842_B4722 BCG9842_B4722 564000 565199 + putative malate dehydrogenase identified by match to protein family HMM PF00390%3B match to protein family HMM PF03949 gene gene573 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4722 BCG9842_B4723 BCG9842_B4723 BCG9842_B4723 562594 563940 + citrate cation symporter family identified by match to protein family HMM PF03390 gene gene572 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4723 BCG9842_B4724 BCG9842_B4724 BCG9842_B4724 561764 562471 + response regulator identified by match to protein family HMM PF00072 gene gene571 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4724 BCG9842_B4725 BCG9842_B4725 BCG9842_B4725 560163 561767 + sensory box histidine kinase identified by match to protein family HMM PF00989%3B match to protein family HMM PF02518%3B match to protein family HMM TIGR00229 gene gene570 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4725 BCG9842_B4726 BCG9842_B4726 BCG9842_B4726 558102 560084 + methyl-accepting chemotaxis protein identified by match to protein family HMM PF00015%3B match to protein family HMM PF00672%3B match to protein family HMM PF02743 gene gene569 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4726 BCG9842_B4727 BCG9842_B4727 BCG9842_B4727 557072 557821 + conserved hypothetical protein gene gene568 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4727 BCG9842_B4728 BCG9842_B4728 BCG9842_B4728 556237 557058 + hypothetical protein identified by glimmer%3B putative gene gene567 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4728 BCG9842_B4729 BCG9842_B4729 BCG9842_B4729 556074 556220 + hypothetical protein identified by glimmer%3B putative gene gene566 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4729 BCG9842_B4730 BCG9842_B4730 BCG9842_B4730 554754 556004 + Two component system histidine kinase identified by match to protein family HMM PF00512%3B match to protein family HMM PF02518 gene gene565 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4730 BCG9842_B4731 BCG9842_B4731 BCG9842_B4731 554086 554757 + DNA-binding response regulator identified by match to protein family HMM PF00072%3B match to protein family HMM PF00486 gene gene564 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4731 BCG9842_B4732 BCG9842_B4732 BCG9842_B4732 553186 553890 + putative serine/threonine phosphatase identified by match to protein family HMM PF00149 gene gene563 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4732 BCG9842_B4733 BCG9842_B4733 BCG9842_B4733 551252 552628 + putative glycerol-3-phosphate ABC transporter%2C glycerol-3-phosphate-binding protein identified by match to protein family HMM PF01547 gene gene562 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4733 BCG9842_B4734 BCG9842_B4734 BCG9842_B4734 550409 551230 + putative glycerol-3-phosphate ABC transporter%2C permease protein identified by match to protein family HMM PF00528 gene gene561 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4734 BCG9842_B4735 BCG9842_B4735 BCG9842_B4735 549480 550412 + putative glycerol-3-phosphate ABC transporter%2C permease protein identified by match to protein family HMM PF00528 gene gene560 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4735 BCG9842_B4736 BCG9842_B4736 BCG9842_B4736 548383 549480 + putative glycerol-3-phosphate ABC transporter%2C ATP-binding protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a premature stop%3B identified by match to protein family HMM PF00005%3B match to protein family HMM PF08402 gene gene559 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4736 BCG9842_B4737 BCG9842_B4737 BCG9842_B4737 547820 548386 + putative glycerol uptake operon antiterminator regulatory protein identified by match to protein family HMM PF04309 gene gene558 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4737 BCG9842_B4738 BCG9842_B4738 BCG9842_B4738 546831 547511 + conserved hypothetical protein gene gene557 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4738 BCG9842_B4739 BCG9842_B4739 BCG9842_B4739 545810 546679 + ankyrin repeat domain protein identified by match to protein family HMM PF00023 gene gene556 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4739 BCG9842_B4740 BCG9842_B4740 BCG9842_B4740 544865 545368 + putative lipoprotein gene gene555 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4740 BCG9842_B4741 BCG9842_B4741 BCG9842_B4741 544475 544729 + conserved hypothetical protein gene gene554 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4741 BCG9842_B4742 BCG9842_B4742 BCG9842_B4742 542916 544220 - citrate transporter%2C CitM family identified by match to protein family HMM PF03600%3B match to protein family HMM PF03606%3B match to protein family HMM PF06808%3B match to protein family HMM TIGR00784 gene gene553 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4742 BCG9842_B4743 BCG9842_B4743 BCG9842_B4743 542176 542868 + response regulator identified by match to protein family HMM PF00072 gene gene552 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4743 BCG9842_B4744 BCG9842_B4744 BCG9842_B4744 540572 542173 + sensor protein CitS identified by match to protein family HMM PF00989%3B match to protein family HMM PF02518 gene gene551 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4744 BCG9842_B4745 BCG9842_B4745 BCG9842_B4745 538445 540421 + methyl-accepting chemotaxis protein identified by match to protein family HMM PF00015%3B match to protein family HMM PF00672%3B match to protein family HMM PF02743 gene gene550 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4745 BCG9842_B4746 BCG9842_B4746 BCG9842_B4746 536621 538195 + SPFH domain/band 7 family protein identified by match to protein family HMM PF01145 gene gene549 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4746 BCG9842_B4747 BCG9842_B4747 BCG9842_B4747 536060 536608 + conserved hypothetical protein identified by match to protein family HMM PF01957 gene gene548 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4747 BCG9842_B4748 BCG9842_B4748 BCG9842_B4748 532916 535813 + putative microbial collagenase identified by match to protein family HMM PF00801%3B match to protein family HMM PF01752%3B match to protein family HMM PF04151%3B match to protein family HMM PF08453 gene gene547 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4748 BCG9842_B4749 BCG9842_B4749 opuD1 opuD1 531097 532647 - glycine betaine transporter identified by match to protein family HMM PF02028%3B match to protein family HMM TIGR00842 gene gene546 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4749 BCG9842_B4750 BCG9842_B4750 BCG9842_B4750 527943 530930 + internalin protein identified by match to protein family HMM PF00746%3B match to protein family HMM PF05031%3B match to protein family HMM TIGR01167 gene gene545 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4750 BCG9842_B4751 BCG9842_B4751 yhbH yhbH 526639 527814 + sporulation protein YhbH identified by match to protein family HMM PF04285%3B match to protein family HMM TIGR02877 gene gene544 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4751 BCG9842_B4752 BCG9842_B4752 BCG9842_B4752 524292 526187 + conserved hypothetical protein identified by match to protein family HMM PF06798%3B match to protein family HMM PF08298 gene gene543 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4752 BCG9842_B4753 BCG9842_B4753 BCG9842_B4753 521830 523899 + sensory box/GGDEF family protein identified by match to protein family HMM PF00563%3B match to protein family HMM PF00989%3B match to protein family HMM PF00990%3B match to protein family HMM PF08447%3B match to protein family HMM PF08448%3B match to protein family HMM TIGR00229%3B match to protein family HMM TIGR00254 gene gene542 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4753 BCG9842_B4754 BCG9842_B4754 BCG9842_B4754 521214 521702 + RNA methyltransferase%2C TrmH family%2C group 2 identified by match to protein family HMM PF00588%3B match to protein family HMM TIGR00185 gene gene541 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4754 BCG9842_B4755 BCG9842_B4755 BCG9842_B4755 520268 521155 + conserved hypothetical protein gene gene540 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4755 BCG9842_B4756 BCG9842_B4756 BCG9842_B4756 519081 520223 + putative iron-sulfur cluster-binding protein identified by match to protein family HMM PF00037%3B match to protein family HMM PF03130%3B match to protein family HMM PF08331%3B match to protein family HMM TIGR00276 gene gene539 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4756 BCG9842_B4757 BCG9842_B4757 BCG9842_B4757 518805 518878 + tRNA-Gly tRNA gene538 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4757 BCG9842_B4758 BCG9842_B4758 BCG9842_B4758 518039 518689 + conserved hypothetical protein identified by match to protein family HMM PF01323 gene gene537 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4758 BCG9842_B4759 BCG9842_B4759 BCG9842_B4759 517075 517851 + penicillin-binding domain protein identified by match to protein family HMM PF00912 gene gene536 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4759 BCG9842_B4760 BCG9842_B4760 BCG9842_B4760 516033 516494 + mutT/nudix family protein identified by match to protein family HMM PF00293 gene gene535 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4760 BCG9842_B4761 BCG9842_B4761 BCG9842_B4761 515168 515887 + conserved hypothetical protein TIGR01033 identified by match to protein family HMM PF01709%3B match to protein family HMM TIGR01033 gene gene534 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4761 BCG9842_B4762 BCG9842_B4762 BCG9842_B4762 514495 514815 - group-specific protein gene gene533 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4762 BCG9842_B4763 BCG9842_B4763 BCG9842_B4763 514227 514313 + tRNA-Leu tRNA gene532 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4763 BCG9842_B4764 BCG9842_B4764 BCG9842_B4764 514147 514220 + tRNA-Cys tRNA gene531 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4764 BCG9842_B4765 BCG9842_B4765 BCG9842_B4765 514058 514132 + tRNA-Gly tRNA gene530 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4765 BCG9842_B4766 BCG9842_B4766 BCG9842_B4766 513978 514052 + tRNA-Gln tRNA gene529 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4766 BCG9842_B4767 BCG9842_B4767 BCG9842_B4767 513838 513915 + tRNA-His tRNA gene528 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4767 BCG9842_B4768 BCG9842_B4768 BCG9842_B4768 513745 513820 + tRNA-Trp tRNA gene527 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4768 BCG9842_B4769 BCG9842_B4769 BCG9842_B4769 513655 513738 + tRNA-Tyr tRNA gene526 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4769 BCG9842_B4770 BCG9842_B4770 BCG9842_B4770 513569 513644 + tRNA-Thr tRNA gene525 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4770 BCG9842_B4771 BCG9842_B4771 BCG9842_B4771 513475 513550 + tRNA-Phe tRNA gene524 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4771 BCG9842_B4772 BCG9842_B4772 BCG9842_B4772 513389 513466 + tRNA-Asp tRNA gene523 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4772 BCG9842_B4773 BCG9842_B4773 BCG9842_B4773 513309 513387 + tRNA-Met tRNA gene522 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4773 BCG9842_B4774 BCG9842_B4774 BCG9842_B4774 513207 513284 + tRNA-Val tRNA gene521 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4774 BCG9842_B4775 BCG9842_B4775 BCG9842_B4775 513128 513204 + tRNA-Glu tRNA gene520 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4775 BCG9842_B4776 BCG9842_B4776 BCG9842_B4776 513019 513112 + tRNA-Ser tRNA gene519 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4776 BCG9842_B4777 BCG9842_B4777 BCG9842_B4777 512942 513018 + tRNA-Asn tRNA gene518 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4777 BCG9842_B4778 BCG9842_B4778 rrf_3 rrf_3 512819 512934 + 5S ribosomal RNA rRNA gene517 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4778 BCG9842_B4779 BCG9842_B4779 rrl_3 rrl_3 509811 512718 + 23S ribosomal RNA rRNA gene516 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4779 BCG9842_B4781 BCG9842_B4781 rrs_3 rrs_3 508124 509632 + 16S ribosomal RNA rRNA gene515 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4781 BCG9842_B4782 BCG9842_B4782 BCG9842_B4782 507336 507692 - conserved hypothetical protein gene gene514 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4782 BCG9842_B4783 BCG9842_B4783 BCG9842_B4783 506810 507229 + ribosomal-protein-alanine acetyltransferase identified by match to protein family HMM PF00583 gene gene513 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4783 BCG9842_B4784 BCG9842_B4784 BCG9842_B4784 506211 506639 + transcriptional regulator%2C Fur family identified by match to protein family HMM PF01475 gene gene512 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4784 BCG9842_B4785 BCG9842_B4785 bcP bcP 505456 505911 + bacterioferritin comigratory protein identified by match to protein family HMM PF00578%3B match to protein family HMM PF08534 gene gene511 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4785 BCG9842_B4786 BCG9842_B4786 BCG9842_B4786 505007 505411 + putative potassium channel protein identified by match to protein family HMM PF07885 gene gene510 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4786 BCG9842_B4787 BCG9842_B4787 BCG9842_B4787 504149 504934 + putative ABC transporter%2C permease protein identified by match to protein family HMM PF06182 gene gene509 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4787 BCG9842_B4788 BCG9842_B4788 BCG9842_B4788 503353 504144 + putative ABC transporter%2C permease protein identified by match to protein family HMM PF06182 gene gene508 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4788 BCG9842_B4789 BCG9842_B4789 BCG9842_B4789 502347 503360 + ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005 gene gene507 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4789 BCG9842_B4790 BCG9842_B4790 hemL1 hemL1 500921 502225 - glutamate-1-semialdehyde-2%2C1-aminomutase identified by match to protein family HMM PF00202%3B match to protein family HMM TIGR00713 gene gene506 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4790 BCG9842_B4791 BCG9842_B4791 BCG9842_B4791 496286 500722 - putative glutamate synthase%2C large subunit identified by match to protein family HMM PF00310%3B match to protein family HMM PF01493%3B match to protein family HMM PF01645%3B match to protein family HMM PF04898 gene gene505 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4791 BCG9842_B4792 BCG9842_B4792 BCG9842_B4792 494841 495929 - putative lipoprotein identified by match to protein family HMM PF06081 gene gene504 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4792 BCG9842_B4793 BCG9842_B4793 BCG9842_B4793 493066 494826 + ABC transporter%2C permease/ATP-binding protein identified by match to protein family HMM PF00005%3B match to protein family HMM PF00664 gene gene503 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4793 BCG9842_B4794 BCG9842_B4794 BCG9842_B4794 492480 493010 + conserved hypothetical protein identified by match to protein family HMM PF04167 gene gene502 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4794 BCG9842_B4795 BCG9842_B4795 BCG9842_B4795 491829 492089 + conserved hypothetical protein gene gene501 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4795 BCG9842_B4796 BCG9842_B4796 BCG9842_B4796 491641 491769 + conserved hypothetical protein gene gene500 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4796 BCG9842_B4797 BCG9842_B4797 BCG9842_B4797 491360 491641 + small acid-soluble spore protein%2C gamma-type identified by match to protein family HMM PF04259%3B match to protein family HMM TIGR01442 gene gene499 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4797 BCG9842_B4798 BCG9842_B4798 BCG9842_B4798 491010 491234 - yfhS protein gene gene498 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4798 BCG9842_B4799 BCG9842_B4799 mutY mutY 489878 490975 + A/G-specific adenine glycosylase identified by match to protein family HMM PF00633%3B match to protein family HMM PF00730%3B match to protein family HMM TIGR01084 gene gene497 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4799 BCG9842_B4800 BCG9842_B4800 BCG9842_B4800 488748 489728 - yfhP protein identified by match to protein family HMM PF04307 gene gene496 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4800 BCG9842_B4801 BCG9842_B4801 BCG9842_B4801 488457 488723 + conserved hypothetical protein gene gene495 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4801 BCG9842_B4802 BCG9842_B4802 sspK sspK 488176 488334 - small%2C acid-soluble spore protein K identified by match to protein family HMM PF08176%3B match to protein family HMM TIGR03091 gene gene494 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4802 BCG9842_B4803 BCG9842_B4803 BCG9842_B4803 487595 487912 + conserved hypothetical protein identified by match to protein family HMM PF08838 gene gene493 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4803 BCG9842_B4804 BCG9842_B4804 BCG9842_B4804 486769 487581 + recX domain protein identified by match to protein family HMM PF02631 gene gene492 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4804 BCG9842_B4805 BCG9842_B4805 BCG9842_B4805 485782 486687 - cell division inhibitor-like protein identified by match to protein family HMM PF01370%3B match to protein family HMM PF08338%3B match to protein family HMM TIGR01777 gene gene491 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4805 BCG9842_B4806 BCG9842_B4806 BCG9842_B4806 484512 485642 - chlorohydrolase family protein identified by match to protein family HMM PF01979%3B match to protein family HMM PF07969 gene gene490 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4806 BCG9842_B4807 BCG9842_B4807 BCG9842_B4807 483713 484270 - conserved hypothetical protein gene gene489 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4807 BCG9842_B4808 BCG9842_B4808 BCG9842_B4808 483484 483603 - conserved hypothetical protein gene gene488 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4808 BCG9842_B4809 BCG9842_B4809 BCG9842_B4809 481949 483115 + conserved hypothetical protein identified by match to protein family HMM PF00534%3B match to protein family HMM PF04101%3B match to protein family HMM PF06925 gene gene487 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4809 BCG9842_B4810 BCG9842_B4810 pflA pflA 480804 481535 + pyruvate formate-lyase-activating enzyme identified by match to protein family HMM PF04055%3B match to protein family HMM TIGR02493 gene gene486 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4810 BCG9842_B4811 BCG9842_B4811 pfl pfl 478485 480734 + formate acetyltransferase identified by match to protein family HMM PF01228%3B match to protein family HMM PF02901%3B match to protein family HMM TIGR01255 gene gene485 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4811 BCG9842_B4812 BCG9842_B4812 BCG9842_B4812 476599 478143 + glycosyl transferase%2C group 2 family protein identified by match to protein family HMM PF00535 gene gene484 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4812 BCG9842_B4813 BCG9842_B4813 BCG9842_B4813 475641 476606 + NAD-dependent epimerase/dehydratase family protein identified by match to protein family HMM PF00106%3B match to protein family HMM PF01073%3B match to protein family HMM PF01370%3B match to protein family HMM PF02719%3B match to protein family HMM PF04321%3B match to protein family HMM PF07993 gene gene483 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4813 BCG9842_B4814 BCG9842_B4814 BCG9842_B4814 474400 475644 + putative polysaccharide biosynthesis protein identified by match to protein family HMM PF00984%3B match to protein family HMM PF03720%3B match to protein family HMM PF03721%3B match to protein family HMM TIGR03026 gene gene482 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4814 BCG9842_B4815 BCG9842_B4815 BCG9842_B4815 472863 474410 + glycosyl transferase%2C group 2 family protein identified by match to protein family HMM PF00535 gene gene481 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4815 BCG9842_B4816 BCG9842_B4816 BCG9842_B4816 472655 472849 + conserved hypothetical protein gene gene480 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4816 BCG9842_B4817 BCG9842_B4817 BCG9842_B4817 472237 472638 + hypothetical protein identified by glimmer%3B putative gene gene479 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4817 BCG9842_B4818 BCG9842_B4818 BCG9842_B4818 470831 472081 + putative penicillin-binding protein identified by match to protein family HMM PF00144 gene gene478 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4818 BCG9842_B4819 BCG9842_B4819 BCG9842_B4819 469084 470577 + putative PTS system%2C N-acetylglucosamine-specific IIBC component identified by match to protein family HMM PF00367%3B match to protein family HMM PF02378%3B match to protein family HMM TIGR00826%3B match to protein family HMM TIGR01998 gene gene477 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4819 BCG9842_B4820 BCG9842_B4820 glsA1 glsA1 467829 468758 - glutaminase A identified by match to protein family HMM PF04960 gene gene476 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4820 BCG9842_B4821 BCG9842_B4821 BCG9842_B4821 467329 467670 - conserved hypothetical protein gene gene475 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4821 BCG9842_B4822 BCG9842_B4822 BCG9842_B4822 467147 467305 + hypothetical protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by glimmer%3B putative gene gene474 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4822 BCG9842_B4823 BCG9842_B4823 BCG9842_B4823 466421 467032 + conserved hypothetical protein identified by match to protein family HMM TIGR02840 gene gene473 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4823 BCG9842_B4824 BCG9842_B4824 BCG9842_B4824 465637 466290 - DNA-binding protein identified by match to protein family HMM PF01381%3B match to protein family HMM PF06803 gene gene472 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4824 BCG9842_B4825 BCG9842_B4825 BCG9842_B4825 464263 465537 + putative acetylornitine deacetylase identified by match to protein family HMM PF01546%3B match to protein family HMM PF07687%3B match to protein family HMM TIGR01910 gene gene471 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4825 BCG9842_B4826 BCG9842_B4826 BCG9842_B4826 462746 464167 + amino acid permease family protein identified by match to protein family HMM PF00324 gene gene470 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4826 BCG9842_B4827 BCG9842_B4827 BCG9842_B4827 462386 462640 + conserved hypothetical protein gene gene469 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4827 BCG9842_B4828 BCG9842_B4828 rocR1 rocR1 460690 462093 - arginine utilization regulatory protein RocR identified by match to protein family HMM PF00158%3B match to protein family HMM PF02954%3B match to protein family HMM TIGR00229 gene gene468 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4828 BCG9842_B4829 BCG9842_B4829 BCG9842_B4829 460402 460605 - hypothetical protein identified by glimmer%3B putative gene gene467 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4829 BCG9842_B4830 BCG9842_B4830 truA2 truA2 459620 460357 + tRNA pseudouridine synthase A identified by match to protein family HMM PF01416%3B match to protein family HMM TIGR00071 gene gene466 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4830 BCG9842_B4831 BCG9842_B4831 BCG9842_B4831 458612 459505 + S-layer protein gene gene465 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4831 BCG9842_B4832 BCG9842_B4832 BCG9842_B4832 456983 458362 + RNA methyltransferase%2C TrmA family identified by match to protein family HMM PF01938%3B match to protein family HMM PF05958%3B match to protein family HMM TIGR00479 gene gene464 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4832 BCG9842_B4833 BCG9842_B4833 BCG9842_B4833 456109 456972 + endonuclease III domain protein identified by match to protein family HMM PF00730 gene gene463 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4833 BCG9842_B4834 BCG9842_B4834 pdaA pdaA 455267 456049 + delta-lactam-biosynthetic de-N-acetylase identified by match to protein family HMM PF01522%3B match to protein family HMM TIGR02884 gene gene462 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4834 BCG9842_B4835 BCG9842_B4835 fumA fumA 453621 455141 + fumarate hydratase%2C class I identified by match to protein family HMM PF05681%3B match to protein family HMM PF05683%3B match to protein family HMM TIGR00722%3B match to protein family HMM TIGR00723 gene gene461 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4835 BCG9842_B4836 BCG9842_B4836 BCG9842_B4836 453232 453414 + conserved hypothetical protein gene gene460 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4836 BCG9842_B4837 BCG9842_B4837 BCG9842_B4837 451891 453018 - conserved hypothetical protein identified by match to protein family HMM PF04055%3B match to protein family HMM PF08756 gene gene459 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4837 BCG9842_B4838 BCG9842_B4838 BCG9842_B4838 451154 451855 + conserved hypothetical protein gene gene458 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4838 BCG9842_B4839 BCG9842_B4839 cax cax 449921 450976 + calcium/proton exchanger identified by match to protein family HMM PF01699%3B match to protein family HMM TIGR00378%3B match to protein family HMM TIGR00846 gene gene457 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4839 BCG9842_B4840 BCG9842_B4840 BCG9842_B4840 449326 449742 - general stress protein 26 identified by match to protein family HMM PF01243 gene gene456 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4840 BCG9842_B4841 BCG9842_B4841 BCG9842_B4841 449025 449171 - conserved hypothetical protein gene gene455 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4841 BCG9842_B4842 BCG9842_B4842 BCG9842_B4842 448387 448815 - transporter%2C EamA family identified by match to protein family HMM PF00892 gene gene454 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4842 BCG9842_B4843 BCG9842_B4843 BCG9842_B4843 447782 448375 + dedA family protein identified by match to protein family HMM PF09335 gene gene453 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4843 BCG9842_B4844 BCG9842_B4844 BCG9842_B4844 444532 447294 - hypothetical protein identified by glimmer%3B putative gene gene452 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4844 BCG9842_B4845 BCG9842_B4845 lepB_3 lepB_3 443961 444494 + signal peptidase I identified by match to protein family HMM PF00717%3B match to protein family HMM TIGR02227 gene gene451 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4845 BCG9842_B4846 BCG9842_B4846 BCG9842_B4846 443099 443779 + conserved hypothetical protein identified by match to protein family HMM PF07947 gene gene450 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4846 BCG9842_B4847 BCG9842_B4847 BCG9842_B4847 442031 442981 + transporter%2C EamA family identified by match to protein family HMM PF00892 gene gene449 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4847 BCG9842_B4848 BCG9842_B4848 BCG9842_B4848 439835 441760 - heavy metal-transporting ATPase identified by match to protein family HMM PF00122%3B match to protein family HMM PF00702%3B match to protein family HMM TIGR01494%3B match to protein family HMM TIGR01512%3B match to protein family HMM TIGR01525 gene gene448 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4848 BCG9842_B4849 BCG9842_B4849 BCG9842_B4849 439690 439803 + hypothetical protein identified by glimmer%3B putative gene gene447 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4849 BCG9842_B4850 BCG9842_B4850 yihY yihY 438780 439646 + YihY family protein identified by match to protein family HMM PF03631%3B match to protein family HMM TIGR00765 gene gene446 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4850 BCG9842_B4851 BCG9842_B4851 BCG9842_B4851 438258 438773 + conserved hypothetical protein gene gene445 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4851 BCG9842_B4852 BCG9842_B4852 BCG9842_B4852 437740 438204 + low molecular weight phosphotyrosine protein phosphatase family protein identified by match to protein family HMM PF01451 gene gene444 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4852 BCG9842_B4853 BCG9842_B4853 BCG9842_B4853 437341 437565 - conserved hypothetical protein identified by match to protein family HMM PF06569 gene gene443 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4853 BCG9842_B4854 BCG9842_B4854 BCG9842_B4854 434482 437148 - cation-transporting ATPase%2C E1-E2 family identified by match to protein family HMM PF00122%3B match to protein family HMM PF00689%3B match to protein family HMM PF00690%3B match to protein family HMM PF00702%3B match to protein family HMM TIGR01494 gene gene442 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4854 BCG9842_B4855 BCG9842_B4855 BCG9842_B4855 433364 434446 + putative tellurite resistance protein identified by match to protein family HMM PF05816 gene gene441 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4855 BCG9842_B4856 BCG9842_B4856 BCG9842_B4856 431714 433345 + conserved hypothetical protein gene gene440 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4856 BCG9842_B4857 BCG9842_B4857 BCG9842_B4857 430813 431604 + putative tellurium resistance protein identified by match to protein family HMM PF03741 gene gene439 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4857 BCG9842_B4858 BCG9842_B4858 BCG9842_B4858 430162 430740 + tellurium resistance protein identified by match to protein family HMM PF02342 gene gene438 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4858 BCG9842_B4859 BCG9842_B4859 BCG9842_B4859 429492 430076 + tellurium resistance protein identified by match to protein family HMM PF02342 gene gene437 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4859 BCG9842_B4860 BCG9842_B4860 BCG9842_B4860 428872 429468 + putative tellurium resistance protein identified by match to protein family HMM PF02342 gene gene436 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4860 BCG9842_B4861 BCG9842_B4861 BCG9842_B4861 427865 428743 + ROK family protein identified by match to protein family HMM PF00480 gene gene435 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4861 BCG9842_B4862 BCG9842_B4862 BCG9842_B4862 426620 427663 - lpxtg-motif cell wall anchor domain protein identified by match to protein family HMM TIGR01167 gene gene434 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4862 BCG9842_B4863 BCG9842_B4863 proS1 proS1 425075 426505 + prolyl-tRNA synthetase identified by match to protein family HMM PF00587%3B match to protein family HMM PF03129%3B match to protein family HMM PF09180%3B match to protein family HMM TIGR00408 gene gene433 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4863 BCG9842_B4864 BCG9842_B4864 BCG9842_B4864 424431 424724 + conserved hypothetical protein gene gene432 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4864 BCG9842_B4865 BCG9842_B4865 BCG9842_B4865 422964 424277 - type I phosphodiesterase/nucleotide pyrophosphatase family protein identified by match to protein family HMM PF01663 gene gene431 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4865 BCG9842_B4866 BCG9842_B4866 BCG9842_B4866 421572 422855 - putative membrane protein identified by match to protein family HMM PF07690 gene gene430 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4866 BCG9842_B4867 BCG9842_B4867 BCG9842_B4867 421308 421502 + DNA-binding protein identified by match to protein family HMM PF01381 gene gene429 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4867 BCG9842_B4868 BCG9842_B4868 BCG9842_B4868 419962 421194 + major facilitator family transporter identified by match to protein family HMM PF07690 gene gene428 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4868 BCG9842_B4869 BCG9842_B4869 BCG9842_B4869 419314 419895 + transcriptional regulator%2C TetR family identified by match to protein family HMM PF00440%3B match to protein family HMM PF08360 gene gene427 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4869 BCG9842_B4870 BCG9842_B4870 BCG9842_B4870 419090 419233 + conserved hypothetical protein gene gene426 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4870 BCG9842_B4871 BCG9842_B4871 BCG9842_B4871 418722 418964 + hypothetical protein identified by glimmer%3B putative gene gene425 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4871 BCG9842_B4872 BCG9842_B4872 BCG9842_B4872 418394 418708 + conserved hypothetical protein gene gene424 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4872 BCG9842_B4873 BCG9842_B4873 BCG9842_B4873 418012 418383 + conserved hypothetical protein identified by match to protein family HMM PF09350 gene gene423 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4873 BCG9842_B4874 BCG9842_B4874 BCG9842_B4874 415616 417640 - chitinase B identified by match to protein family HMM PF00041%3B match to protein family HMM PF00553%3B match to protein family HMM PF00704 gene gene422 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4874 BCG9842_B4875 BCG9842_B4875 BCG9842_B4875 413631 415175 + ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005 gene gene421 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4875 BCG9842_B4876 BCG9842_B4876 BCG9842_B4876 412486 413235 + ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005 gene gene420 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4876 BCG9842_B4877 BCG9842_B4877 BCG9842_B4877 411491 412489 + putative ABC transporter%2C substrate-binding protein identified by match to protein family HMM PF09084 gene gene419 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4877 BCG9842_B4878 BCG9842_B4878 BCG9842_B4878 410727 411494 + putative ABC transporter%2C permease protein identified by match to protein family HMM PF00528 gene gene418 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4878 BCG9842_B4879 BCG9842_B4879 BCG9842_B4879 410429 410749 + conserved hypothetical protein identified by match to protein family HMM PF01910 gene gene417 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4879 BCG9842_B4881 BCG9842_B4881 BCG9842_B4881 406592 410173 + linear gramicidin synthetase subunit C identified by match to protein family HMM PF00501%3B match to protein family HMM PF00550%3B match to protein family HMM PF01073%3B match to protein family HMM PF07993%3B match to protein family HMM TIGR01733%3B match to protein family HMM TIGR01746 gene gene416 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4881 BCG9842_B4882 BCG9842_B4882 BCG9842_B4882 404714 406456 + methyl-accepting chemotaxis protein identified by match to protein family HMM PF00015%3B match to protein family HMM PF00672 gene gene415 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4882 BCG9842_B4883 BCG9842_B4883 BCG9842_B4883 402900 404213 - anaerobic C4-dicarboxylate membrane transporter identified by match to protein family HMM PF03605%3B match to protein family HMM TIGR00770 gene gene414 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4883 BCG9842_B4884 BCG9842_B4884 thiE thiE 402127 402783 + thiamine-phosphate pyrophosphorylase identified by match to protein family HMM PF02581%3B match to protein family HMM TIGR00693 gene gene413 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4884 BCG9842_B4885 BCG9842_B4885 thiM thiM 401300 402109 + hydroxyethylthiazole kinase identified by match to protein family HMM PF02110%3B match to protein family HMM TIGR00694 gene gene412 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4885 BCG9842_B4887 BCG9842_B4887 topB1 topB1 398734 400923 - DNA topoisomerase III identified by match to protein family HMM PF01131%3B match to protein family HMM PF01751%3B match to protein family HMM TIGR01056 gene gene411 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4887 BCG9842_B4888 BCG9842_B4888 BCG9842_B4888 395834 398695 + phage infection protein identified by match to protein family HMM PF01061%3B match to protein family HMM TIGR03061%3B match to protein family HMM TIGR03062 gene gene410 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4888 BCG9842_B4889 BCG9842_B4889 BCG9842_B4889 394738 395529 + endonuclease/exonuclease/phosphatase family protein identified by match to protein family HMM PF03372 gene gene409 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4889 BCG9842_B4890 BCG9842_B4890 BCG9842_B4890 393096 394733 + PTS system%2C IIBC component identified by match to protein family HMM PF00367%3B match to protein family HMM PF02378%3B match to protein family HMM TIGR00826%3B match to protein family HMM TIGR02003 gene gene408 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4890 BCG9842_B4891 BCG9842_B4891 BCG9842_B4891 391226 392890 + glycosyl hydrolase family protein identified by match to protein family HMM PF00128 gene gene407 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4891 BCG9842_B4892 BCG9842_B4892 BCG9842_B4892 389648 390982 - FAD-dependent oxidase identified by match to protein family HMM PF01565%3B match to protein family HMM PF08031 gene gene406 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4892 BCG9842_B4893 BCG9842_B4893 BCG9842_B4893 388841 389524 + conserved hypothetical protein gene gene405 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4893 BCG9842_B4894 BCG9842_B4894 BCG9842_B4894 387995 388684 + transcriptional regulator%2C Crp family identified by match to protein family HMM PF00027 gene gene404 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4894 BCG9842_B4895 BCG9842_B4895 arcC arcC 386831 387793 + carbamate kinase identified by match to protein family HMM PF00696%3B match to protein family HMM TIGR00746 gene gene403 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4895 BCG9842_B4896 BCG9842_B4896 BCG9842_B4896 385378 386793 + arginine/ornithine antiporter identified by match to protein family HMM PF00324%3B match to protein family HMM TIGR00905 gene gene402 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4896 BCG9842_B4897 BCG9842_B4897 argF_2 argF_2 384280 385278 + ornithine carbamoyltransferase identified by match to protein family HMM PF00185%3B match to protein family HMM PF02729%3B match to protein family HMM TIGR00658 gene gene401 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4897 BCG9842_B4898 BCG9842_B4898 arcA arcA 383017 384249 + arginine deiminase identified by match to protein family HMM PF02274%3B match to protein family HMM TIGR01078 gene gene400 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4898 BCG9842_B4899 BCG9842_B4899 argR_2 argR_2 382299 382748 + arginine repressor identified by match to protein family HMM PF01316%3B match to protein family HMM PF02863%3B match to protein family HMM TIGR01529 gene gene399 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4899 BCG9842_B4900 BCG9842_B4900 BCG9842_B4900 380860 382152 + methyl-accepting chemotaxis protein identified by match to protein family HMM PF00015%3B match to protein family HMM PF00672 gene gene398 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4900 BCG9842_B4901 BCG9842_B4901 BCG9842_B4901 379928 380650 - amino acid ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005 gene gene397 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4901 BCG9842_B4902 BCG9842_B4902 BCG9842_B4902 379012 379806 - putative amino acid ABC transporter%2C amino acid-binding protein identified by match to protein family HMM PF00497 gene gene396 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4902 BCG9842_B4903 BCG9842_B4903 BCG9842_B4903 378209 378901 - putative amino acid ABC transporter%2C permease protein identified by match to protein family HMM PF00528%3B match to protein family HMM TIGR01726 gene gene395 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4903 BCG9842_B4904 BCG9842_B4904 BCG9842_B4904 377070 378155 + fatty acid desaturase identified by match to protein family HMM PF00487 gene gene394 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4904 BCG9842_B4905 BCG9842_B4905 BCG9842_B4905 374962 376488 - oxidoreductase identified by match to protein family HMM PF00355%3B match to protein family HMM PF01266 gene gene393 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4905 BCG9842_B4906 BCG9842_B4906 BCG9842_B4906 373515 374816 - putative benzoate transport protein identified by match to protein family HMM PF00083%3B match to protein family HMM PF07690 gene gene392 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4906 BCG9842_B4907 BCG9842_B4907 BCG9842_B4907 372719 373501 + conserved hypothetical protein gene gene391 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4907 BCG9842_B4908 BCG9842_B4908 BCG9842_B4908 371498 372607 + conserved hypothetical protein gene gene390 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4908 BCG9842_B4910 BCG9842_B4910 BCG9842_B4910 370516 371148 - putative cyclase identified by match to protein family HMM PF04199 gene gene389 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4910 BCG9842_B4911 BCG9842_B4911 BCG9842_B4911 370001 370381 + hypothetical protein identified by glimmer%3B putative gene gene388 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4911 BCG9842_B4912 BCG9842_B4912 BCG9842_B4912 368545 369771 + sporulation kinase identified by match to protein family HMM PF00512%3B match to protein family HMM PF02518 gene gene387 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4912 BCG9842_B4913 BCG9842_B4913 BCG9842_B4913 367142 368407 + hypothetical protein identified by glimmer%3B putative gene gene386 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4913 BCG9842_B4914 BCG9842_B4914 BCG9842_B4914 366235 366903 + conserved hypothetical protein gene gene385 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4914 BCG9842_B4915 BCG9842_B4915 BCG9842_B4915 365623 366072 + putative spore coat protein B gene gene384 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4915 BCG9842_B4916 BCG9842_B4916 BCG9842_B4916 365078 365602 + spore coat protein B gene gene383 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4916 BCG9842_B4917 BCG9842_B4917 BCG9842_B4917 364604 364843 + DNA binding domain%2C excisionase family identified by match to protein family HMM TIGR01764 gene gene382 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4917 BCG9842_B4918 BCG9842_B4918 BCG9842_B4918 364049 364417 - hypothetical protein identified by glimmer%3B putative gene gene381 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4918 BCG9842_B4919 BCG9842_B4919 BCG9842_B4919 362804 363853 + pyridine nucleotide-disulfide oxidoreductase family protein identified by match to protein family HMM PF00070%3B match to protein family HMM PF01134%3B match to protein family HMM PF03486%3B match to protein family HMM PF07992 gene gene380 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4919 BCG9842_B4920 BCG9842_B4920 BCG9842_B4920 361555 362472 - iron compound ABC transporter%2C iron compound-binding protein identified by match to protein family HMM PF01497 gene gene379 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4920 BCG9842_B4921 BCG9842_B4921 BCG9842_B4921 360466 361506 - iron compound ABC transporter%2C permease protein identified by match to protein family HMM PF01032 gene gene378 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4921 BCG9842_B4922 BCG9842_B4922 BCG9842_B4922 359462 360469 - iron compound ABC transporter%2C permease protein identified by match to protein family HMM PF01032 gene gene377 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4922 BCG9842_B4923 BCG9842_B4923 BCG9842_B4923 358776 359417 + aldolase%2C class II identified by match to protein family HMM PF00596 gene gene376 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4923 BCG9842_B4924 BCG9842_B4924 BCG9842_B4924 357676 358722 + putative translation initiation factor%2C aIF-2BI family identified by match to protein family HMM PF01008%3B match to protein family HMM TIGR00512%3B match to protein family HMM TIGR00524 gene gene375 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4924 BCG9842_B4925 BCG9842_B4925 BCG9842_B4925 356437 357666 + putative 5-methylthioribose kinase identified by match to protein family HMM TIGR01767 gene gene374 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4925 BCG9842_B4926 BCG9842_B4926 ahpC ahpC 355282 355845 - peroxiredoxin identified by match to protein family HMM PF00578%3B match to protein family HMM PF08534%3B match to protein family HMM TIGR03137 gene gene373 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4926 BCG9842_B4927 BCG9842_B4927 ahpF ahpF 353741 355267 - alkyl hydroperoxide reductase%2C F subunit identified by match to protein family HMM PF00070%3B match to protein family HMM PF01134%3B match to protein family HMM PF07992%3B match to protein family HMM TIGR03140 gene gene372 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4927 BCG9842_B4928 BCG9842_B4928 BCG9842_B4928 353103 353708 + conserved domain protein gene gene371 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4928 BCG9842_B4929 BCG9842_B4929 amhX amhX 351794 352909 + amidohydrolase amhX identified by match to protein family HMM PF01546%3B match to protein family HMM PF07687%3B match to protein family HMM TIGR01891 gene gene370 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4929 BCG9842_B4930 BCG9842_B4930 BCG9842_B4930 348820 350091 + transcriptional regulator domain protein gene gene368 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4930 BCG9842_B4931 BCG9842_B4931 nhaC1 nhaC1 350080 351501 - Na+/H+ antiporter NhaC identified by match to protein family HMM PF03553%3B match to protein family HMM PF03600%3B match to protein family HMM TIGR00931 gene gene369 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4931 BCG9842_B4932 BCG9842_B4932 BCG9842_B4932 347616 348725 - mandelate racemase/muconate lactonizing enzyme family protein identified by match to protein family HMM PF01188%3B match to protein family HMM PF02746 gene gene367 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4932 BCG9842_B4933 BCG9842_B4933 BCG9842_B4933 346906 347601 - conserved hypothetical protein gene gene366 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4933 BCG9842_B4934 BCG9842_B4934 BCG9842_B4934 346522 346686 + zinc metalloprotease an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a premature stop gene gene365 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4934 BCG9842_B4935 BCG9842_B4935 BCG9842_B4935 345979 346473 + zinc metalloprotease an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a premature stop%3B identified by match to protein family HMM PF01863 gene gene364 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4935 BCG9842_B4936 BCG9842_B4936 BCG9842_B4936 345366 345884 + conserved hypothetical protein identified by match to protein family HMM PF07308 gene gene363 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4936 BCG9842_B4937 BCG9842_B4937 BCG9842_B4937 344037 345026 + probable tRNA-dihydrouridine synthase 2 identified by match to protein family HMM PF01207 gene gene362 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4937 BCG9842_B4938 BCG9842_B4938 BCG9842_B4938 342511 343875 + RNA methyltransferase%2C TrmA family identified by match to protein family HMM PF01938%3B match to protein family HMM PF02475%3B match to protein family HMM PF05958%3B match to protein family HMM TIGR00479 gene gene361 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4938 BCG9842_B4940 BCG9842_B4940 BCG9842_B4940 340877 342073 - nucleoside transporter%2C NupC family identified by match to protein family HMM PF01773%3B match to protein family HMM PF07662%3B match to protein family HMM PF07670 gene gene360 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4940 BCG9842_B4941 BCG9842_B4941 BCG9842_B4941 340123 340830 + conserved hypothetical protein gene gene359 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4941 BCG9842_B4942 BCG9842_B4942 BCG9842_B4942 339734 339907 - hypothetical protein identified by glimmer%3B putative gene gene358 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4942 BCG9842_B4943 BCG9842_B4943 BCG9842_B4943 338504 339586 - polysaccharide deacetylase-like protein identified by match to protein family HMM PF01522 gene gene357 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4943 BCG9842_B4944 BCG9842_B4944 ampS ampS 337158 338387 - aminopeptidase AmpS identified by match to protein family HMM PF02073 gene gene356 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4944 BCG9842_B4945 BCG9842_B4945 BCG9842_B4945 336621 337112 + IG hypothetical 17967 gene gene355 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4945 BCG9842_B4946 BCG9842_B4946 BCG9842_B4946 336165 336488 + multidrug resistance protein%2C Smr family identified by match to protein family HMM PF00893 gene gene354 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4946 BCG9842_B4947 BCG9842_B4947 gabD gabD 334666 336117 + succinate-semialdehyde dehydrogenase (NADP+) identified by match to protein family HMM PF00171%3B match to protein family HMM TIGR01780 gene gene353 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4947 BCG9842_B4948 BCG9842_B4948 BCG9842_B4948 333306 334673 + sensory box sigma-54 dependent DNA-binding response regulator identified by match to protein family HMM PF00158%3B match to protein family HMM PF07728%3B match to protein family HMM PF08448%3B match to protein family HMM TIGR00229 gene gene352 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4948 BCG9842_B4949 BCG9842_B4949 gabT gabT 331826 333190 + 4-aminobutyrate aminotransferase identified by match to protein family HMM PF00202%3B match to protein family HMM TIGR00700 gene gene351 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4949 BCG9842_B4950 BCG9842_B4950 BCG9842_B4950 330925 331671 + haloacid dehalogenase/epoxide hydrolase family protein identified by match to protein family HMM PF00702%3B match to protein family HMM TIGR01549 gene gene350 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4950 BCG9842_B4951 BCG9842_B4951 BCG9842_B4951 329879 330784 + conserved hypothetical protein TIGR00147 identified by match to protein family HMM PF00781%3B match to protein family HMM TIGR00147 gene gene349 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4951 BCG9842_B4952 BCG9842_B4952 gatB gatB 327890 329317 + glutamyl-tRNA(Gln) amidotransferase%2C B subunit identified by match to protein family HMM PF01162%3B match to protein family HMM PF02637%3B match to protein family HMM PF02934%3B match to protein family HMM TIGR00133 gene gene348 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4952 BCG9842_B4953 BCG9842_B4953 gatA gatA 326418 327875 + glutamyl-tRNA(Gln) amidotransferase%2C A subunit identified by match to protein family HMM PF01425%3B match to protein family HMM TIGR00132 gene gene347 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4953 BCG9842_B4954 BCG9842_B4954 gatC gatC 326112 326402 + glutamyl-tRNA(Gln) amidotransferase%2C C subunit identified by match to protein family HMM PF02686%3B match to protein family HMM TIGR00135 gene gene346 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4954 BCG9842_B4955 BCG9842_B4955 BCG9842_B4955 325734 325970 + conserved hypothetical protein identified by match to protein family HMM PF05360 gene gene345 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4955 BCG9842_B4956 BCG9842_B4956 BCG9842_B4956 325020 325502 - transcriptional regulator%2C MarR family identified by match to protein family HMM PF01047 gene gene344 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4956 BCG9842_B4957 BCG9842_B4957 BCG9842_B4957 323763 324941 - anion-transporting ATPase family protein identified by match to protein family HMM PF02374%3B match to protein family HMM TIGR00345 gene gene343 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4957 BCG9842_B4958 BCG9842_B4958 BCG9842_B4958 323579 323770 - hypothetical protein identified by glimmer%3B putative gene gene342 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4958 BCG9842_B4959 BCG9842_B4959 BCG9842_B4959 323050 323517 - conserved hypothetical protein gene gene341 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4959 BCG9842_B4960 BCG9842_B4960 BCG9842_B4960 322028 322882 + putative ABC transporter%2C substrate-binding protein identified by match to protein family HMM PF03180 gene gene340 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4960 BCG9842_B4961 BCG9842_B4961 BCG9842_B4961 321341 322006 + ABC transporter%2C permease protein identified by match to protein family HMM PF00528 gene gene339 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4961 BCG9842_B4962 BCG9842_B4962 BCG9842_B4962 320332 321351 + ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005%3B match to protein family HMM PF09383 gene gene338 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4962 BCG9842_B4964 BCG9842_B4964 BCG9842_B4964 319314 319859 - isochorismatase family protein identified by match to protein family HMM PF00857 gene gene337 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4964 BCG9842_B4965 BCG9842_B4965 BCG9842_B4965 317496 319043 + putative delta-1-pyrroline-5-carboxylate dehydrogenase identified by match to protein family HMM PF00171%3B match to protein family HMM TIGR01237 gene gene336 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4965 BCG9842_B4966 BCG9842_B4966 BCG9842_B4966 316572 317342 + putative membrane protein identified by match to protein family HMM PF01925 gene gene335 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4966 BCG9842_B4967 BCG9842_B4967 BCG9842_B4967 315282 316475 + putative lipoprotein identified by match to protein family HMM PF07537 gene gene334 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4967 BCG9842_B4968 BCG9842_B4968 ligA ligA 313256 315265 + DNA ligase%2C NAD-dependent identified by match to protein family HMM PF00533%3B match to protein family HMM PF01653%3B match to protein family HMM PF03119%3B match to protein family HMM PF03120%3B match to protein family HMM TIGR00575 gene gene333 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4968 BCG9842_B4969 BCG9842_B4969 pcrA pcrA 310980 313241 + ATP-dependent DNA helicase PcrA identified by match to protein family HMM PF00580%3B match to protein family HMM TIGR01073 gene gene332 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4969 BCG9842_B4970 BCG9842_B4970 BCG9842_B4970 310290 310979 + pcrB family protein identified by match to protein family HMM PF01884%3B match to protein family HMM TIGR01768 gene gene331 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4970 BCG9842_B4971 BCG9842_B4971 BCG9842_B4971 310080 310205 + conserved hypothetical protein gene gene330 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4971 BCG9842_B4972 BCG9842_B4972 BCG9842_B4972 309631 310008 - conserved hypothetical protein gene gene329 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4972 BCG9842_B4973 BCG9842_B4973 BCG9842_B4973 308566 309411 - SPFH domain/band 7 family protein identified by match to protein family HMM PF01145 gene gene328 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4973 BCG9842_B4974 BCG9842_B4974 BCG9842_B4974 308386 308550 - conserved domain protein gene gene327 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4974 BCG9842_B4975 BCG9842_B4975 purD purD 307078 308349 + phosphoribosylamine--glycine ligase identified by match to protein family HMM PF01071%3B match to protein family HMM PF02222%3B match to protein family HMM PF02655%3B match to protein family HMM PF02843%3B match to protein family HMM PF02844%3B match to protein family HMM PF08442%3B match to protein family HMM TIGR00877 gene gene326 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4975 BCG9842_B4976 BCG9842_B4976 purH purH 305320 306855 + phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase identified by match to protein family HMM PF01808%3B match to protein family HMM PF02142%3B match to protein family HMM TIGR00355 gene gene325 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4976 BCG9842_B4977 BCG9842_B4977 purN purN 304708 305295 + phosphoribosylglycinamide formyltransferase identified by match to protein family HMM PF00551%3B match to protein family HMM TIGR00639 gene gene324 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4977 BCG9842_B4978 BCG9842_B4978 purM purM 303671 304711 + phosphoribosylformylglycinamidine cyclo-ligase identified by match to protein family HMM PF00586%3B match to protein family HMM PF02769%3B match to protein family HMM TIGR00878 gene gene323 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4978 BCG9842_B4979 BCG9842_B4979 purF purF 302150 303565 + amidophosphoribosyltransferase identified by match to protein family HMM PF00156%3B match to protein family HMM PF00310%3B match to protein family HMM TIGR01134 gene gene322 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4979 BCG9842_B4980 BCG9842_B4980 purL purL 299946 302165 + phosphoribosylformylglycinamidine synthase II identified by match to protein family HMM PF00586%3B match to protein family HMM PF02769%3B match to protein family HMM TIGR01736 gene gene321 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4980 BCG9842_B4981 BCG9842_B4981 purQ purQ 299279 299962 + phosphoribosylformylglycinamidine synthase I identified by match to protein family HMM PF00117%3B match to protein family HMM PF07685%3B match to protein family HMM TIGR01737 gene gene320 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4981 BCG9842_B4982 BCG9842_B4982 BCG9842_B4982 299028 299282 + phosphoribosylformylglycinamidine synthase%2C PurS protein identified by match to protein family HMM PF02700%3B match to protein family HMM TIGR00302 gene gene319 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4982 BCG9842_B4983 BCG9842_B4983 purC purC 298316 299035 + phosphoribosylaminoimidazole-succinocarboxamide synthase identified by match to protein family HMM PF01259%3B match to protein family HMM TIGR00081 gene gene318 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4983 BCG9842_B4984 BCG9842_B4984 purB_2 purB_2 296920 298227 + adenylosuccinate lyase identified by match to protein family HMM PF00206%3B match to protein family HMM TIGR00928 gene gene317 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4984 BCG9842_B4985 BCG9842_B4985 purK purK 295772 296923 + phosphoribosylaminoimidazole carboxylase%2C ATPase subunit identified by match to protein family HMM PF02222%3B match to protein family HMM TIGR01161 gene gene316 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4985 BCG9842_B4986 BCG9842_B4986 purE purE 295290 295775 + phosphoribosylaminoimidazole carboxylase%2C catalytic subunit identified by match to protein family HMM PF00731%3B match to protein family HMM TIGR01162 gene gene315 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4986 BCG9842_B4988 BCG9842_B4988 rrf_4 rrf_4 294435 294550 + 5S ribosomal RNA rRNA gene314 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4988 BCG9842_B4989 BCG9842_B4989 rrl_4 rrl_4 291478 294385 + 23S ribosomal RNA rRNA gene313 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4989 BCG9842_B4991 BCG9842_B4991 rrs_4 rrs_4 289791 291299 + 16S ribosomal RNA rRNA gene312 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4991 BCG9842_B4992 BCG9842_B4992 BCG9842_B4992 288659 289450 - conserved hypothetical protein gene gene311 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4992 BCG9842_B4993 BCG9842_B4993 BCG9842_B4993 287652 288572 + transporter%2C Drug/Metabolite Exporter family identified by match to protein family HMM PF00892 gene gene310 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4993 BCG9842_B4994 BCG9842_B4994 rrf_5 rrf_5 287324 287439 + 5S ribosomal RNA rRNA gene309 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4994 BCG9842_B4995 BCG9842_B4995 rrl_5 rrl_5 284367 287274 + 23S ribosomal RNA rRNA gene308 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4995 BCG9842_B4997 BCG9842_B4997 rrs_5 rrs_5 282680 284188 + 16S ribosomal RNA rRNA gene307 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4997 BCG9842_B4998 BCG9842_B4998 BCG9842_B4998 281462 282175 - DNA-binding response regulator identified by match to protein family HMM PF00072%3B match to protein family HMM PF00486 gene gene306 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4998 BCG9842_B4999 BCG9842_B4999 BCG9842_B4999 280459 281472 - putative sensor histidine kinase identified by match to protein family HMM PF00512%3B match to protein family HMM PF02518 gene gene305 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B4999 BCG9842_B5000 BCG9842_B5000 BCG9842_B5000 279461 280390 - putative bacitracin ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005 gene gene304 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5000 BCG9842_B5001 BCG9842_B5001 BCG9842_B5001 278731 279468 - putative bacitracin ABC transporter%2C permease protein gene gene303 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5001 BCG9842_B5002 BCG9842_B5002 bacA1 bacA1 277916 278713 - bacitracin resistance protein identified by match to protein family HMM PF02673%3B match to protein family HMM TIGR00753 gene gene302 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5002 BCG9842_B5003 BCG9842_B5003 BCG9842_B5003 277101 277559 - asch domain superfamily identified by match to protein family HMM PF04266 gene gene301 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5003 BCG9842_B5004 BCG9842_B5004 rrf_6 rrf_6 276909 277024 + 5S ribosomal RNA rRNA gene300 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5004 BCG9842_B5005 BCG9842_B5005 rrl_6 rrl_6 273952 276859 + 23S ribosomal RNA rRNA gene299 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5005 BCG9842_B5007 BCG9842_B5007 rrs_6 rrs_6 272265 273773 + 16S ribosomal RNA rRNA gene298 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5007 BCG9842_B5008 BCG9842_B5008 BCG9842_B5008 270072 270887 + proline dehydrogenase an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a premature stop%3B identified by match to protein family HMM PF01619 gene gene297 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5008 BCG9842_B5009 BCG9842_B5009 BCG9842_B5009 269677 270105 - transcriptional regulator%2C GntR family gene gene296 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5009 BCG9842_B5010 BCG9842_B5010 rrf_7 rrf_7 269393 269508 + 5S ribosomal RNA rRNA gene295 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5010 BCG9842_B5011 BCG9842_B5011 rrl_7 rrl_7 266436 269343 + 23S ribosomal RNA rRNA gene294 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5011 BCG9842_B5013 BCG9842_B5013 rrs_7 rrs_7 264749 266257 + 16S ribosomal RNA rRNA gene293 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5013 BCG9842_B5014 BCG9842_B5014 BCG9842_B5014 263643 264374 + FrnE protein identified by match to protein family HMM PF01323 gene gene292 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5014 BCG9842_B5015 BCG9842_B5015 BCG9842_B5015 262541 263443 + alpha/beta hydrolase gene gene291 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5015 BCG9842_B5016 BCG9842_B5016 rrf_8 rrf_8 262136 262251 + 5S ribosomal RNA rRNA gene290 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5016 BCG9842_B5017 BCG9842_B5017 rrl_8 rrl_8 259179 262086 + 23S ribosomal RNA rRNA gene289 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5017 BCG9842_B5019 BCG9842_B5019 rrs_8 rrs_8 257492 259000 + 16S ribosomal RNA rRNA gene288 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5019 BCG9842_B5020 BCG9842_B5020 BCG9842_B5020 255667 257172 + sensor histidine kinase identified by match to protein family HMM PF00512%3B match to protein family HMM PF00672%3B match to protein family HMM PF02518 gene gene287 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5020 BCG9842_B5021 BCG9842_B5021 BCG9842_B5021 254982 255683 + DNA-binding response regulator identified by match to protein family HMM PF00072%3B match to protein family HMM PF00486 gene gene286 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5021 BCG9842_B5022 BCG9842_B5022 BCG9842_B5022 253363 254688 + xanthine/uracil permease family protein identified by match to protein family HMM PF00860 gene gene285 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5022 BCG9842_B5024 BCG9842_B5024 guaA guaA 251438 252976 + GMP synthase identified by match to protein family HMM PF00117%3B match to protein family HMM PF00958%3B match to protein family HMM TIGR00884%3B match to protein family HMM TIGR00888 gene gene284 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5024 BCG9842_B5026 BCG9842_B5026 groL groL 249397 251031 + chaperonin GroL identified by match to protein family HMM PF00118%3B match to protein family HMM TIGR02348 gene gene283 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5026 BCG9842_B5027 BCG9842_B5027 groES groES 249073 249357 + chaperonin%2C 10 kDa identified by match to protein family HMM PF00166 gene gene282 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5027 BCG9842_B5028 BCG9842_B5028 BCG9842_B5028 247932 248681 - CAAX amino terminal protease family protein identified by match to protein family HMM PF02517 gene gene281 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5028 BCG9842_B5029 BCG9842_B5029 BCG9842_B5029 247744 247935 - putative lipoprotein gene gene280 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5029 BCG9842_B5030 BCG9842_B5030 BCG9842_B5030 247085 247714 + conserved hypothetical protein identified by match to protein family HMM PF02629%3B match to protein family HMM PF06971 gene gene279 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5030 BCG9842_B5031 BCG9842_B5031 BCG9842_B5031 244963 246897 - ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005 gene gene278 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5031 BCG9842_B5032 BCG9842_B5032 BCG9842_B5032 243483 244499 + putative O-sialoglycoprotein endopeptidase identified by match to protein family HMM PF00814%3B match to protein family HMM TIGR00329 gene gene277 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5032 BCG9842_B5033 BCG9842_B5033 rimI rimI 243040 243483 + ribosomal-protein-alanine acetyltransferase identified by match to protein family HMM PF00583%3B match to protein family HMM TIGR01575 gene gene276 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5033 BCG9842_B5034 BCG9842_B5034 BCG9842_B5034 242333 243025 + conserved hypothetical protein identified by match to protein family HMM PF00814 gene gene275 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5034 BCG9842_B5035 BCG9842_B5035 BCG9842_B5035 241879 242352 + conserved hypothetical protein TIGR00150 identified by match to protein family HMM PF02367%3B match to protein family HMM TIGR00150 gene gene274 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5035 BCG9842_B5036 BCG9842_B5036 BCG9842_B5036 241628 241705 + tRNA-Asp tRNA gene273 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5036 BCG9842_B5037 BCG9842_B5037 BCG9842_B5037 241548 241626 + tRNA-Met tRNA gene272 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5037 BCG9842_B5038 BCG9842_B5038 rrf_9 rrf_9 241421 241536 + 5S ribosomal RNA rRNA gene271 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5038 BCG9842_B5039 BCG9842_B5039 rrl_9 rrl_9 238465 241372 + 23S ribosomal RNA rRNA gene270 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5039 BCG9842_B5041 BCG9842_B5041 rrs_9 rrs_9 236778 238286 + 16S ribosomal RNA rRNA gene269 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5041 BCG9842_B5042 BCG9842_B5042 BCG9842_B5042 236605 236678 + tRNA-Gly tRNA gene268 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5042 BCG9842_B5043 BCG9842_B5043 BCG9842_B5043 236527 236603 + tRNA-Pro tRNA gene267 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5043 BCG9842_B5044 BCG9842_B5044 BCG9842_B5044 236446 236522 + tRNA-Arg tRNA gene266 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5044 BCG9842_B5045 BCG9842_B5045 BCG9842_B5045 236267 236352 + tRNA-Leu tRNA gene265 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5045 BCG9842_B5046 BCG9842_B5046 BCG9842_B5046 236176 236251 + tRNA-Lys tRNA gene264 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5046 BCG9842_B5047 BCG9842_B5047 BCG9842_B5047 236096 236170 + tRNA-Gln tRNA gene263 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5047 BCG9842_B5048 BCG9842_B5048 BCG9842_B5048 235933 236010 + tRNA-Asp tRNA gene262 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5048 BCG9842_B5049 BCG9842_B5049 BCG9842_B5049 235853 235931 + tRNA-Met tRNA gene261 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5049 BCG9842_B5050 BCG9842_B5050 BCG9842_B5050 235752 235827 + tRNA-Val tRNA gene260 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5050 BCG9842_B5051 BCG9842_B5051 BCG9842_B5051 235672 235748 + tRNA-Glu tRNA gene259 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5051 BCG9842_B5052 BCG9842_B5052 BCG9842_B5052 235573 235665 + tRNA-Ser tRNA gene258 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5052 BCG9842_B5053 BCG9842_B5053 BCG9842_B5053 235495 235571 + tRNA-Asn tRNA gene257 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5053 BCG9842_B5054 BCG9842_B5054 BCG9842_B5054 234924 235382 + conserved hypothetical protein identified by match to protein family HMM PF03926 gene gene256 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5054 BCG9842_B5055 BCG9842_B5055 BCG9842_B5055 232386 234554 + S1 RNA binding domain protein identified by match to protein family HMM PF00575%3B match to protein family HMM PF09371 gene gene255 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5055 BCG9842_B5056 BCG9842_B5056 BCG9842_B5056 231968 232318 + transcriptional regulator%2C PemK family identified by match to protein family HMM PF02452 gene gene254 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5056 BCG9842_B5057 BCG9842_B5057 BCG9842_B5057 231676 231963 + conserved hypothetical protein gene gene253 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5057 BCG9842_B5058 BCG9842_B5058 dal1 dal1 230196 231365 + alanine racemase identified by match to protein family HMM PF00842%3B match to protein family HMM PF01168%3B match to protein family HMM TIGR00492 gene gene252 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5058 BCG9842_B5059 BCG9842_B5059 BCG9842_B5059 229065 230078 + putative lipoprotein gene gene251 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5059 BCG9842_B5060 BCG9842_B5060 acpS acpS 228612 228971 + holo-(acyl-carrier-protein) synthase identified by match to protein family HMM PF01648%3B match to protein family HMM TIGR00516%3B match to protein family HMM TIGR00556 gene gene250 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5060 BCG9842_B5061 BCG9842_B5061 BCG9842_B5061 226991 227953 + putative UV-endonuclease identified by match to protein family HMM PF03851%3B match to protein family HMM TIGR00629 gene gene248 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5061 BCG9842_B5062 BCG9842_B5062 BCG9842_B5062 227946 228518 - rhomboid family protein identified by match to protein family HMM PF01694 gene gene249 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5062 BCG9842_B5063 BCG9842_B5063 BCG9842_B5063 225307 226896 + DEAD/DEAH box helicase identified by match to protein family HMM PF00270%3B match to protein family HMM PF00271 gene gene247 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5063 BCG9842_B5064 BCG9842_B5064 murF murF 223625 225001 + UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase identified by match to protein family HMM PF01225%3B match to protein family HMM PF02875%3B match to protein family HMM PF08245%3B match to protein family HMM TIGR01143 gene gene246 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5064 BCG9842_B5065 BCG9842_B5065 BCG9842_B5065 222476 223561 + D-alanine--D-alanine ligase identified by match to protein family HMM PF01071%3B match to protein family HMM PF01820%3B match to protein family HMM PF02222%3B match to protein family HMM PF07478%3B match to protein family HMM TIGR01205 gene gene245 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5065 BCG9842_B5066 BCG9842_B5066 BCG9842_B5066 220961 222232 + major facilitator family transporter identified by match to protein family HMM PF07690 gene gene244 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5066 BCG9842_B5067 BCG9842_B5067 BCG9842_B5067 219436 220851 + amino acid permease identified by match to protein family HMM PF00324 gene gene243 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5067 BCG9842_B5068 BCG9842_B5068 BCG9842_B5068 218030 219202 + putative homogentisate 1%2C2-dioxygenase identified by match to protein family HMM PF04209 gene gene242 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5068 BCG9842_B5069 BCG9842_B5069 BCG9842_B5069 217108 218064 + fumarylacetoacetate hydrolase family protein identified by match to protein family HMM PF01557 gene gene241 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5069 BCG9842_B5070 BCG9842_B5070 hppD hppD 215923 217041 + 4-hydroxyphenylpyruvate dioxygenase identified by match to protein family HMM PF00903%3B match to protein family HMM TIGR01263 gene gene240 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5070 BCG9842_B5071 BCG9842_B5071 BCG9842_B5071 215410 215529 + hypothetical protein identified by glimmer%3B putative gene gene239 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5071 BCG9842_B5072 BCG9842_B5072 BCG9842_B5072 215259 215375 + hypothetical protein identified by glimmer%3B putative gene gene238 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5072 BCG9842_B5073 BCG9842_B5073 BCG9842_B5073 215108 215224 + hypothetical protein identified by glimmer%3B putative gene gene237 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5073 BCG9842_B5074 BCG9842_B5074 BCG9842_B5074 214957 215073 + hypothetical protein identified by glimmer%3B putative gene gene236 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5074 BCG9842_B5075 BCG9842_B5075 BCG9842_B5075 213501 214373 - hydrolase%2C haloacid dehalogenase-like family identified by match to protein family HMM PF00702%3B match to protein family HMM PF05116%3B match to protein family HMM PF08282%3B match to protein family HMM TIGR00099%3B match to protein family HMM TIGR01484 gene gene235 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5075 BCG9842_B5076 BCG9842_B5076 BCG9842_B5076 212500 213465 + oligopeptide ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005%3B match to protein family HMM PF08352%3B match to protein family HMM TIGR01727 gene gene234 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5076 BCG9842_B5077 BCG9842_B5077 BCG9842_B5077 211523 212503 + oligopeptide ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005%3B match to protein family HMM PF08352%3B match to protein family HMM TIGR01727 gene gene233 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5077 BCG9842_B5078 BCG9842_B5078 BCG9842_B5078 210592 211512 + oligopeptide ABC transporter%2C permease protein identified by match to protein family HMM PF00528 gene gene232 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5078 BCG9842_B5079 BCG9842_B5079 BCG9842_B5079 209622 210578 + oligopeptide ABC transporter%2C permease protein identified by match to protein family HMM PF00528 gene gene231 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5079 BCG9842_B5080 BCG9842_B5080 BCG9842_B5080 207791 209518 + oligopeptide-binding protein OppA identified by match to protein family HMM PF00496 gene gene230 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5080 BCG9842_B5081 BCG9842_B5081 BCG9842_B5081 207225 207422 - hypothetical protein identified by glimmer%3B putative gene gene229 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5081 BCG9842_B5082 BCG9842_B5082 BCG9842_B5082 204930 206810 + ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005 gene gene228 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5082 BCG9842_B5083 BCG9842_B5083 BCG9842_B5083 204122 204244 - conserved hypothetical protein gene gene227 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5083 BCG9842_B5084 BCG9842_B5084 BCG9842_B5084 203958 204089 - hypothetical protein identified by glimmer%3B putative gene gene226 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5084 BCG9842_B5085 BCG9842_B5085 BCG9842_B5085 203224 203985 - conserved hypothetical protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a premature stop gene gene225 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5085 BCG9842_B5086 BCG9842_B5086 BCG9842_B5086 202653 203186 + invasion protein IagB domain protein identified by match to protein family HMM PF01464 gene gene224 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5086 BCG9842_B5087 BCG9842_B5087 BCG9842_B5087 200763 202412 - conserved hypothetical protein gene gene223 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5087 BCG9842_B5088 BCG9842_B5088 BCG9842_B5088 199882 200646 + putative deoxyribonuclease%2C TatD family identified by match to protein family HMM PF01026 gene gene222 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5088 BCG9842_B5089 BCG9842_B5089 BCG9842_B5089 199710 199823 + hypothetical protein identified by glimmer%3B putative gene gene221 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5089 BCG9842_B5090 BCG9842_B5090 BCG9842_B5090 198788 199144 + conserved hypothetical protein identified by match to protein family HMM PF06486%3B match to protein family HMM TIGR01655 gene gene220 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5090 BCG9842_B5091 BCG9842_B5091 BCG9842_B5091 197813 198649 + yitT family protein identified by match to protein family HMM PF02588 gene gene219 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5091 BCG9842_B5092 BCG9842_B5092 BCG9842_B5092 197365 197694 + hypothetical protein identified by glimmer%3B putative gene gene218 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5092 BCG9842_B5093 BCG9842_B5093 BCG9842_B5093 196225 197202 + sugar-binding transcriptional regulator%2C LacI family identified by match to protein family HMM PF00356%3B match to protein family HMM PF00532 gene gene217 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5093 BCG9842_B5094 BCG9842_B5094 BCG9842_B5094 195146 195751 + putative 1-acyl-sn-glycerol-3-phosphate acyltransferase identified by match to protein family HMM PF01553%3B match to protein family HMM TIGR00530 gene gene216 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5094 BCG9842_B5095 BCG9842_B5095 BCG9842_B5095 194512 194652 + hypothetical protein identified by glimmer%3B putative gene gene215 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5095 BCG9842_B5096 BCG9842_B5096 BCG9842_B5096 193537 194490 + transporter%2C EamA family identified by match to protein family HMM PF00892 gene gene214 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5096 BCG9842_B5097 BCG9842_B5097 BCG9842_B5097 192528 193394 - transcriptional regulator%2C LysR family identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466 gene gene213 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5097 BCG9842_B5098 BCG9842_B5098 BCG9842_B5098 191036 191956 + periplasmic molybdate-binding protein identified by match to protein family HMM TIGR01764 gene gene212 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5098 BCG9842_B5099 BCG9842_B5099 modA modA 190069 190875 - molybdenum ABC transporter%2C molybdenum-binding protein identified by match to protein family HMM PF01547%3B match to protein family HMM TIGR01256 gene gene211 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5099 BCG9842_B5100 BCG9842_B5100 modB modB 189389 190063 - molybdate ABC transporter%2C permease protein identified by match to protein family HMM PF00528%3B match to protein family HMM TIGR02141 gene gene210 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5100 BCG9842_B5101 BCG9842_B5101 BCG9842_B5101 188238 189089 - putative transporter identified by match to protein family HMM PF06800 gene gene209 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5101 BCG9842_B5102 BCG9842_B5102 BCG9842_B5102 188027 188170 + nucleoside transporter%2C PnuC family gene gene208 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5102 BCG9842_B5103 BCG9842_B5103 BCG9842_B5103 187107 187910 - putative pyrroline-5-carboxylate reductase identified by match to protein family HMM PF03807%3B match to protein family HMM TIGR00112 gene gene207 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5103 BCG9842_B5104 BCG9842_B5104 BCG9842_B5104 186272 187105 - oxidoreductase%2C aldo/keto reductase family identified by match to protein family HMM PF00248 gene gene206 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5104 BCG9842_B5106 BCG9842_B5106 BCG9842_B5106 184242 185882 - putative oligopeptide ABC transporter%2C oligopeptide-binding protein identified by match to protein family HMM PF00496 gene gene205 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5106 BCG9842_B5107 BCG9842_B5107 BCG9842_B5107 182197 183837 - putative oligopeptide ABC transporter%2C oligopeptide-binding protein identified by match to protein family HMM PF00496 gene gene204 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5107 BCG9842_B5108 BCG9842_B5108 BCG9842_B5108 181942 182157 + ABC-2 type transporter gene gene203 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5108 BCG9842_B5109 BCG9842_B5109 BCG9842_B5109 181302 181769 - putative lipoprotein gene gene202 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5109 BCG9842_B5110 BCG9842_B5110 BCG9842_B5110 179675 181285 + oligopeptide ABC transporter%2C oligopeptide-binding protein identified by match to protein family HMM PF00496 gene gene201 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5110 BCG9842_B5111 BCG9842_B5111 BCG9842_B5111 178888 179661 + oligopeptide ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005 gene gene200 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5111 BCG9842_B5112 BCG9842_B5112 BCG9842_B5112 177881 178891 + oligopeptide ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005%3B match to protein family HMM PF08352%3B match to protein family HMM TIGR01727 gene gene199 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5112 BCG9842_B5113 BCG9842_B5113 BCG9842_B5113 176920 177924 + oligopeptide ABC transporter%2C permease protein identified by match to protein family HMM PF00528 gene gene198 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5113 BCG9842_B5114 BCG9842_B5114 BCG9842_B5114 175985 176902 + oligopeptide ABC transporter%2C permease protein identified by match to protein family HMM PF00528 gene gene197 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5114 BCG9842_B5116 BCG9842_B5116 BCG9842_B5116 175358 175573 - hypothetical protein identified by glimmer%3B putative gene gene196 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5116 BCG9842_B5117 BCG9842_B5117 BCG9842_B5117 174838 175341 + putative lipoprotein gene gene195 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5117 BCG9842_B5118 BCG9842_B5118 BCG9842_B5118 174117 174563 - hypothetical protein identified by glimmer%3B putative gene gene194 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5118 BCG9842_B5119 BCG9842_B5119 BCG9842_B5119 172833 174083 + drug resistance transporter%2C Bcr/CflA family identified by match to protein family HMM PF07690%3B match to protein family HMM TIGR00710 gene gene193 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5119 BCG9842_B5120 BCG9842_B5120 BCG9842_B5120 170988 172706 + conserved domain protein gene gene192 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5120 BCG9842_B5121 BCG9842_B5121 BCG9842_B5121 170376 170909 + conserved hypothetical protein gene gene191 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5121 BCG9842_B5122 BCG9842_B5122 BCG9842_B5122 168943 170379 + oxidoreductase%2C FAD-binding identified by match to protein family HMM PF01565 gene gene190 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5122 BCG9842_B5123 BCG9842_B5123 BCG9842_B5123 168112 168876 + putative lipoprotein gene gene189 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5123 BCG9842_B5124 BCG9842_B5124 BCG9842_B5124 167047 167955 - oxidoreductase%2C zinc-binding dehydrogenase family identified by match to protein family HMM PF00107%3B match to protein family HMM PF08240 gene gene188 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5124 BCG9842_B5126 BCG9842_B5126 BCG9842_B5126 165954 166766 - putative ABC transporter%2C substrate-binding protein identified by match to protein family HMM PF03180 gene gene187 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5126 BCG9842_B5127 BCG9842_B5127 BCG9842_B5127 164901 165941 - ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005%3B match to protein family HMM PF09383 gene gene186 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5127 BCG9842_B5128 BCG9842_B5128 BCG9842_B5128 164258 164926 - ABC transporter%2C permease protein identified by match to protein family HMM PF00528 gene gene185 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5128 BCG9842_B5129 BCG9842_B5129 BCG9842_B5129 163441 164217 + oxidoreductase%2C short chain dehydrogenase/reductase family identified by match to protein family HMM PF00106 gene gene184 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5129 BCG9842_B5130 BCG9842_B5130 BCG9842_B5130 162541 163047 - conserved hypothetical protein identified by match to protein family HMM PF04173%3B match to protein family HMM PF07681 gene gene183 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5130 BCG9842_B5131 BCG9842_B5131 BCG9842_B5131 161902 162468 + conserved hypothetical protein gene gene182 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5131 BCG9842_B5132 BCG9842_B5132 BCG9842_B5132 159830 161794 + prolyl oligopeptidase family protein identified by match to protein family HMM PF00326 gene gene181 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5132 BCG9842_B5133 BCG9842_B5133 glmS glmS 157767 159569 + glucosamine--fructose-6-phosphate aminotransferase (isomerizing) identified by match to protein family HMM PF00310%3B match to protein family HMM PF01380%3B match to protein family HMM TIGR01135 gene gene180 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5133 BCG9842_B5134 BCG9842_B5134 BCG9842_B5134 157420 157575 + gene gene179 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5134 BCG9842_B5135 BCG9842_B5135 glmM glmM 155934 157280 + phosphoglucosamine mutase identified by match to protein family HMM PF00408%3B match to protein family HMM PF02878%3B match to protein family HMM PF02879%3B match to protein family HMM PF02880%3B match to protein family HMM TIGR01455 gene gene178 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5135 BCG9842_B5136 BCG9842_B5136 BCG9842_B5136 154454 155941 + conserved hypothetical protein identified by match to protein family HMM PF07949 gene gene177 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5136 BCG9842_B5137 BCG9842_B5137 BCG9842_B5137 153640 154461 + conserved hypothetical protein TIGR00159 identified by match to protein family HMM PF02457%3B match to protein family HMM TIGR00159 gene gene176 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5137 BCG9842_B5138 BCG9842_B5138 rocF rocF 152498 153391 + arginase identified by match to protein family HMM PF00491%3B match to protein family HMM TIGR01229 gene gene175 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5138 BCG9842_B5139 BCG9842_B5139 BCG9842_B5139 151142 152287 + glycerate kinase identified by match to protein family HMM PF02595%3B match to protein family HMM TIGR00045 gene gene174 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5139 BCG9842_B5140 BCG9842_B5140 BCG9842_B5140 150952 151027 + tRNA-Ala tRNA gene173 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5140 BCG9842_B5141 BCG9842_B5141 BCG9842_B5141 150870 150944 + tRNA-Gly tRNA gene172 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5141 BCG9842_B5142 BCG9842_B5142 BCG9842_B5142 150789 150864 + tRNA-Lys tRNA gene171 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5142 BCG9842_B5143 BCG9842_B5143 BCG9842_B5143 150709 150783 + tRNA-Gln tRNA gene170 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5143 BCG9842_B5144 BCG9842_B5144 BCG9842_B5144 150560 150643 + tRNA-Tyr tRNA gene169 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5144 BCG9842_B5145 BCG9842_B5145 BCG9842_B5145 150467 150544 + tRNA-Val tRNA gene168 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5145 BCG9842_B5146 BCG9842_B5146 BCG9842_B5146 150387 150463 + tRNA-Glu tRNA gene167 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5146 BCG9842_B5147 BCG9842_B5147 BCG9842_B5147 150294 150369 + tRNA-Thr tRNA gene166 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5147 BCG9842_B5148 BCG9842_B5148 BCG9842_B5148 150214 150290 + tRNA-Asn tRNA gene165 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5148 BCG9842_B5149 BCG9842_B5149 rrf_10 rrf_10 150090 150205 + 5S ribosomal RNA rRNA gene164 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5149 BCG9842_B5150 BCG9842_B5150 rrl_10 rrl_10 147092 149999 + 23S ribosomal RNA rRNA gene163 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5150 BCG9842_B5152 BCG9842_B5152 rrs_10 rrs_10 145405 146913 + 16S ribosomal RNA rRNA gene162 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5152 BCG9842_B5153 BCG9842_B5153 BCG9842_B5153 144936 145154 + conserved hypothetical protein gene gene161 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5153 BCG9842_B5154 BCG9842_B5154 pdaB pdaB 144001 144765 - polysaccharide deacetylase family sporulation protein PdaB identified by match to protein family HMM PF01522%3B match to protein family HMM TIGR02764 gene gene160 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5154 BCG9842_B5155 BCG9842_B5155 BCG9842_B5155 143270 143881 + KinB-signaling pathway activation protein gene gene159 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5155 BCG9842_B5156 BCG9842_B5156 gerD gerD 142513 143130 - spore germination protein GerD gene gene158 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5156 BCG9842_B5157 BCG9842_B5157 BCG9842_B5157 141277 142344 + mrp protein gene gene157 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5157 BCG9842_B5158 BCG9842_B5158 cwlD cwlD 140419 141132 + germination-specific N-acetylmuramoyl-L-alanine amidase identified by match to protein family HMM PF01520%3B match to protein family HMM TIGR02883 gene gene156 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5158 BCG9842_B5159 BCG9842_B5159 BCG9842_B5159 139924 140352 + conserved hypothetical protein gene gene155 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5159 BCG9842_B5160 BCG9842_B5160 rpsI rpsI 139370 139762 + ribosomal protein S9 identified by match to protein family HMM PF00380 gene gene154 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5160 BCG9842_B5161 BCG9842_B5161 rplM rplM 138911 139348 + ribosomal protein L13 identified by match to protein family HMM PF00572%3B match to protein family HMM TIGR01066 gene gene153 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5161 BCG9842_B5163 BCG9842_B5163 truA1 truA1 138000 138758 + tRNA pseudouridine synthase A identified by match to protein family HMM PF01416%3B match to protein family HMM TIGR00071 gene gene152 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5163 BCG9842_B5164 BCG9842_B5164 BCG9842_B5164 137206 138000 + cobalt transport protein identified by match to protein family HMM PF02361 gene gene151 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5164 BCG9842_B5165 BCG9842_B5165 BCG9842_B5165 136337 137218 + ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005 gene gene150 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5165 BCG9842_B5166 BCG9842_B5166 BCG9842_B5166 135519 136361 + ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005 gene gene149 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5166 BCG9842_B5167 BCG9842_B5167 rplQ rplQ 135053 135415 + ribosomal protein L17 identified by match to protein family HMM PF01196%3B match to protein family HMM TIGR00059 gene gene148 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5167 BCG9842_B5168 BCG9842_B5168 rpoA rpoA 134073 135017 + DNA-directed RNA polymerase%2C alpha subunit identified by match to protein family HMM PF01000%3B match to protein family HMM PF01193%3B match to protein family HMM PF03118%3B match to protein family HMM TIGR02027 gene gene147 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5168 BCG9842_B5169 BCG9842_B5169 rpsK rpsK 133503 133892 + ribosomal protein S11 identified by match to protein family HMM PF00411%3B match to protein family HMM TIGR03632 gene gene146 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5169 BCG9842_B5170 BCG9842_B5170 rpsM rpsM 133113 133478 + ribosomal protein S13 identified by match to protein family HMM PF00416%3B match to protein family HMM TIGR03631 gene gene145 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5170 BCG9842_B5171 BCG9842_B5171 rpmJ rpmJ 132978 133091 + ribosomal protein L36 identified by match to protein family HMM PF00444%3B match to protein family HMM TIGR01022 gene gene144 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5171 BCG9842_B5172 BCG9842_B5172 infA infA 132724 132942 + translation initiation factor IF-1 identified by match to protein family HMM PF00575%3B match to protein family HMM PF01176%3B match to protein family HMM TIGR00008 gene gene143 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5172 BCG9842_B5173 BCG9842_B5173 maP1 maP1 131945 132655 + methionine aminopeptidase identified by match to protein family HMM PF00557%3B match to protein family HMM TIGR00500 gene gene142 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5173 BCG9842_B5174 BCG9842_B5174 adk adk 131259 131909 + adenylate kinase identified by match to protein family HMM PF00406%3B match to protein family HMM PF05191%3B match to protein family HMM TIGR01351 gene gene141 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5174 BCG9842_B5175 BCG9842_B5175 secY1 secY1 129903 131204 + preprotein translocase%2C SecY subunit identified by match to protein family HMM PF00344%3B match to protein family HMM TIGR00967 gene gene140 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5175 BCG9842_B5176 BCG9842_B5176 rplO rplO 129463 129903 + ribosomal protein L15 identified by match to protein family HMM PF00256%3B match to protein family HMM PF01305%3B match to protein family HMM TIGR01071 gene gene139 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5176 BCG9842_B5177 BCG9842_B5177 rpmD rpmD 129247 129429 + ribosomal protein L30 identified by match to protein family HMM PF00327%3B match to protein family HMM TIGR01308 gene gene138 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5177 BCG9842_B5178 BCG9842_B5178 rpsE rpsE 128733 129233 + ribosomal protein S5 identified by match to protein family HMM PF00333%3B match to protein family HMM PF03719%3B match to protein family HMM TIGR01021 gene gene137 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5178 BCG9842_B5179 BCG9842_B5179 rplR rplR 128349 128711 + ribosomal protein L18 identified by match to protein family HMM PF00861%3B match to protein family HMM TIGR00060 gene gene136 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5179 BCG9842_B5180 BCG9842_B5180 rplF rplF 127776 128315 + ribosomal protein L6 identified by match to protein family HMM PF00347 gene gene135 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5180 BCG9842_B5181 BCG9842_B5181 rpsH rpsH 127345 127743 + ribosomal protein S8 identified by match to protein family HMM PF00410 gene gene134 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5181 BCG9842_B5182 BCG9842_B5182 rpsN rpsN 127130 127315 + ribosomal protein S14 identified by match to protein family HMM PF00253 gene gene133 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5182 BCG9842_B5183 BCG9842_B5183 rplE rplE 126557 127096 + ribosomal protein L5 identified by match to protein family HMM PF00281%3B match to protein family HMM PF00673 gene gene132 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5183 BCG9842_B5184 BCG9842_B5184 rplX rplX 126219 126530 + ribosomal protein L24 identified by match to protein family HMM PF00467%3B match to protein family HMM TIGR01079 gene gene131 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5184 BCG9842_B5185 BCG9842_B5185 rplN rplN 125812 126180 + ribosomal protein L14 identified by match to protein family HMM PF00238%3B match to protein family HMM TIGR01067 gene gene130 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5185 BCG9842_B5186 BCG9842_B5186 rpsQ rpsQ 125505 125768 + ribosomal protein S17 identified by match to protein family HMM PF00366%3B match to protein family HMM TIGR03635 gene gene129 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5186 BCG9842_B5187 BCG9842_B5187 rpmC rpmC 125284 125484 + ribosomal protein L29 identified by match to protein family HMM PF00831%3B match to protein family HMM TIGR00012 gene gene128 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5187 BCG9842_B5188 BCG9842_B5188 rplP rplP 124860 125294 + ribosomal protein L16 identified by match to protein family HMM PF00252%3B match to protein family HMM TIGR01164 gene gene127 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5188 BCG9842_B5189 BCG9842_B5189 rpsC rpsC 124199 124858 + ribosomal protein S3 identified by match to protein family HMM PF00189%3B match to protein family HMM PF00417%3B match to protein family HMM PF07650%3B match to protein family HMM TIGR01009 gene gene126 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5189 BCG9842_B5190 BCG9842_B5190 rplV rplV 123854 124195 + ribosomal protein L22 identified by match to protein family HMM PF00237%3B match to protein family HMM TIGR01044 gene gene125 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5190 BCG9842_B5191 BCG9842_B5191 rpsS rpsS 123612 123836 + ribosomal protein S19 an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF00203%3B match to protein family HMM TIGR01050 gene gene124 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5191 BCG9842_B5192 BCG9842_B5192 rplB rplB 122669 123499 + ribosomal protein L2 identified by match to protein family HMM PF00181%3B match to protein family HMM PF03947%3B match to protein family HMM TIGR01171 gene gene123 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5192 BCG9842_B5193 BCG9842_B5193 rplW rplW 122350 122640 + ribosomal protein L23 identified by match to protein family HMM PF00276 gene gene122 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5193 BCG9842_B5194 BCG9842_B5194 rplD rplD 121727 122350 + ribosomal protein L4 identified by match to protein family HMM PF00573 gene gene121 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5194 BCG9842_B5195 BCG9842_B5195 rplC rplC 121069 121701 + ribosomal protein L3 identified by match to protein family HMM PF00297%3B match to protein family HMM TIGR03625 gene gene120 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5195 BCG9842_B5196 BCG9842_B5196 rpsJ rpsJ 120726 121034 + ribosomal protein S10 identified by match to protein family HMM PF00338%3B match to protein family HMM TIGR01049 gene gene119 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5196 BCG9842_B5197 BCG9842_B5197 tuf tuf 119141 120328 + translation elongation factor Tu identified by match to protein family HMM PF00009%3B match to protein family HMM PF03143%3B match to protein family HMM PF03144%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR00485 gene gene118 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5197 BCG9842_B5198 BCG9842_B5198 fusA fusA 116945 119023 + translation elongation factor G identified by match to protein family HMM PF00009%3B match to protein family HMM PF00679%3B match to protein family HMM PF03144%3B match to protein family HMM PF03764%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR00484 gene gene117 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5198 BCG9842_B5199 BCG9842_B5199 rpsG rpsG 116269 116739 + ribosomal protein S7 identified by match to protein family HMM PF00177%3B match to protein family HMM TIGR01029 gene gene116 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5199 BCG9842_B5200 BCG9842_B5200 rpsL rpsL 115817 116239 + ribosomal protein S12 identified by match to protein family HMM PF00164%3B match to protein family HMM TIGR00981 gene gene115 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5200 BCG9842_B5201 BCG9842_B5201 BCG9842_B5201 115454 115702 + ribosomal protein L7A family identified by match to protein family HMM PF01248 gene gene114 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5201 BCG9842_B5202 BCG9842_B5202 rpoC rpoC 111729 115340 + DNA-directed RNA polymerase%2C beta' subunit identified by match to protein family HMM PF00623%3B match to protein family HMM PF04983%3B match to protein family HMM PF04997%3B match to protein family HMM PF04998%3B match to protein family HMM PF05000%3B match to protein family HMM TIGR02386 gene gene113 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5202 BCG9842_B5203 BCG9842_B5203 rpoB rpoB 108158 111691 + DNA-directed RNA polymerase%2C beta subunit identified by match to protein family HMM PF00562%3B match to protein family HMM PF04560%3B match to protein family HMM PF04561%3B match to protein family HMM PF04563%3B match to protein family HMM PF04565%3B match to protein family HMM TIGR02013 gene gene112 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5203 BCG9842_B5204 BCG9842_B5204 BCG9842_B5204 107267 107866 + ybxB protein identified by match to protein family HMM PF05175%3B match to protein family HMM PF08242 gene gene111 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5204 BCG9842_B5205 BCG9842_B5205 rplL rplL 106831 107190 + ribosomal protein L7/L12 identified by match to protein family HMM PF00542%3B match to protein family HMM TIGR00855 gene gene110 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5205 BCG9842_B5206 BCG9842_B5206 rplJ rplJ 106263 106763 + ribosomal protein L10 identified by match to protein family HMM PF00466 gene gene109 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5206 BCG9842_B5208 BCG9842_B5208 rplA rplA 105337 106029 + ribosomal protein L1 identified by match to protein family HMM PF00687%3B match to protein family HMM TIGR01169 gene gene108 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5208 BCG9842_B5209 BCG9842_B5209 rplK rplK 104734 105159 + ribosomal protein L11 identified by match to protein family HMM PF00298%3B match to protein family HMM PF03946%3B match to protein family HMM TIGR01632 gene gene107 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5209 BCG9842_B5210 BCG9842_B5210 nusG nusG 104033 104566 + transcription antitermination protein NusG identified by match to protein family HMM PF02357%3B match to protein family HMM TIGR00922 gene gene106 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5210 BCG9842_B5211 BCG9842_B5211 secE secE 103722 103901 + preprotein translocase%2C SecE subunit identified by match to protein family HMM PF00584%3B match to protein family HMM TIGR00964 gene gene105 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5211 BCG9842_B5212 BCG9842_B5212 sigH sigH 102747 103406 + RNA polymerase sigma-30 factor identified by match to protein family HMM PF04542%3B match to protein family HMM PF08281%3B match to protein family HMM TIGR02859%3B match to protein family HMM TIGR02937 gene gene104 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5212 BCG9842_B5213 BCG9842_B5213 BCG9842_B5213 102167 102679 + conserved hypothetical protein identified by match to protein family HMM PF05991 gene gene103 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5213 BCG9842_B5214 BCG9842_B5214 BCG9842_B5214 101420 102163 + RNA methyltransferase%2C TrmH family%2C group 3 identified by match to protein family HMM PF00588%3B match to protein family HMM PF08032%3B match to protein family HMM TIGR00186 gene gene102 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5214 BCG9842_B5215 BCG9842_B5215 BCG9842_B5215 101016 101423 + conserved hypothetical protein identified by match to protein family HMM PF00636 gene gene101 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5215 BCG9842_B5216 BCG9842_B5216 cysS cysS 99616 101013 + cysteinyl-tRNA synthetase identified by match to protein family HMM PF01406%3B match to protein family HMM PF09190%3B match to protein family HMM PF09334%3B match to protein family HMM TIGR00435 gene gene100 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5216 BCG9842_B5217 BCG9842_B5217 cysE cysE 98970 99635 + serine O-acetyltransferase identified by match to protein family HMM PF00132%3B match to protein family HMM TIGR01172 gene gene99 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5217 BCG9842_B5218 BCG9842_B5218 gltX gltX 97061 98536 + glutamyl-tRNA synthetase identified by match to protein family HMM PF00749%3B match to protein family HMM TIGR00464 gene gene98 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5218 BCG9842_B5219 BCG9842_B5219 ispF ispF 96513 96989 + 2C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase identified by match to protein family HMM PF02542%3B match to protein family HMM TIGR00151 gene gene97 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5219 BCG9842_B5220 BCG9842_B5220 ispD ispD 95716 96396 + 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase identified by match to protein family HMM PF01128%3B match to protein family HMM TIGR00453 gene gene96 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5220 BCG9842_B5221 BCG9842_B5221 BCG9842_B5221 94596 95699 + conserved hypothetical protein identified by match to protein family HMM PF01850%3B match to protein family HMM PF01938 gene gene95 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5221 BCG9842_B5222 BCG9842_B5222 BCG9842_B5222 93360 94433 + putative DNA-binding protein identified by match to protein family HMM PF00633%3B match to protein family HMM PF02457 gene gene94 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5222 BCG9842_B5223 BCG9842_B5223 radA radA 91980 93356 + DNA repair protein RadA identified by match to protein family HMM TIGR00416 gene gene93 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5223 BCG9842_B5224 BCG9842_B5224 BCG9842_B5224 89449 91884 + negative regulator of genetic competence ClpC/MecB identified by match to protein family HMM PF00004%3B match to protein family HMM PF02151%3B match to protein family HMM PF02861%3B match to protein family HMM PF07724%3B match to protein family HMM PF07728 gene gene92 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5224 BCG9842_B5225 BCG9842_B5225 BCG9842_B5225 88362 89426 + phosphotransferase domain protein identified by match to protein family HMM PF00217 gene gene91 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5225 BCG9842_B5226 BCG9842_B5226 BCG9842_B5226 87809 88357 + conserved hypothetical protein identified by match to protein family HMM PF02151 gene gene90 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5226 BCG9842_B5227 BCG9842_B5227 ctsR ctsR 87177 87638 + transcriptional regulator CtsR identified by match to protein family HMM PF05848 gene gene89 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5227 BCG9842_B5228 BCG9842_B5228 rrf_11 rrf_11 86844 86959 + 5S ribosomal RNA rRNA gene88 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5228 BCG9842_B5229 BCG9842_B5229 rrl_11 rrl_11 83886 86793 + 23S ribosomal RNA rRNA gene87 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5229 BCG9842_B5231 BCG9842_B5231 rrs_11 rrs_11 82199 83707 + 16S ribosomal RNA rRNA gene86 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5231 BCG9842_B5232 BCG9842_B5232 lysS_2 lysS_2 80301 81800 + lysyl-tRNA synthetase identified by match to protein family HMM PF00152%3B match to protein family HMM PF01336%3B match to protein family HMM TIGR00499 gene gene85 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5232 BCG9842_B5233 BCG9842_B5233 BCG9842_B5233 79143 80141 + putative TIM-barrel protein%2C NifR3 family identified by match to protein family HMM PF01180%3B match to protein family HMM PF01207%3B match to protein family HMM TIGR00737 gene gene84 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5233 BCG9842_B5234 BCG9842_B5234 BCG9842_B5234 78916 79119 + DNA-binding protein identified by match to protein family HMM PF01381 gene gene83 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5234 BCG9842_B5235 BCG9842_B5235 folK folK 78449 78964 + 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase identified by match to protein family HMM PF01288%3B match to protein family HMM TIGR01498 gene gene82 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5235 BCG9842_B5236 BCG9842_B5236 folB folB 78090 78452 + dihydroneopterin aldolase identified by match to protein family HMM PF02152%3B match to protein family HMM TIGR00525%3B match to protein family HMM TIGR00526 gene gene81 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5236 BCG9842_B5237 BCG9842_B5237 folP folP 77256 78089 + dihydropteroate synthase identified by match to protein family HMM PF00809%3B match to protein family HMM TIGR01496 gene gene80 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5237 BCG9842_B5238 BCG9842_B5238 pabC pabC 76382 77254 + 4-amino-4-deoxychorismate lyase PabC identified by match to protein family HMM PF01063 gene gene79 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5238 BCG9842_B5239 BCG9842_B5239 pabA pabA 75801 76388 + para-aminobenzoate synthase%2C glutamine amidotransferase component identified by match to protein family HMM PF00117%3B match to protein family HMM TIGR00566 gene gene78 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5239 BCG9842_B5240 BCG9842_B5240 pabB pabB 74398 75795 + para-aminobenzoate synthase%2C component I identified by match to protein family HMM PF00425%3B match to protein family HMM PF04715 gene gene77 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5240 BCG9842_B5241 BCG9842_B5241 cysK1 cysK1 73252 74175 + cysteine synthase A identified by match to protein family HMM PF00291%3B match to protein family HMM TIGR01136%3B match to protein family HMM TIGR01139 gene gene76 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5241 BCG9842_B5242 BCG9842_B5242 hslO hslO 72272 73147 + chaperonin%2C 33 kDa identified by match to protein family HMM PF01430 gene gene75 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5242 BCG9842_B5243 BCG9842_B5243 coaX coaX 71477 72265 + pantothenate kinase%2C type III identified by match to protein family HMM PF03309%3B match to protein family HMM TIGR00671 gene gene74 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5243 BCG9842_B5244 BCG9842_B5244 ftsH ftsH 69331 71232 + cell division protein FtsH identified by match to protein family HMM PF00004%3B match to protein family HMM PF01434%3B match to protein family HMM PF06480%3B match to protein family HMM PF07728%3B match to protein family HMM TIGR01241 gene gene73 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5244 BCG9842_B5245 BCG9842_B5245 hpt_2 hpt_2 68703 69245 + hypoxanthine phosphoribosyltransferase identified by match to protein family HMM PF00156%3B match to protein family HMM TIGR01203 gene gene72 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5245 BCG9842_B5246 BCG9842_B5246 tilS tilS 67276 68706 + tRNA(Ile)-lysidine synthetase identified by match to protein family HMM PF01171%3B match to protein family HMM PF06508%3B match to protein family HMM TIGR02432%3B match to protein family HMM TIGR02433 gene gene71 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5246 BCG9842_B5247 BCG9842_B5247 spoIIE spoIIE 64574 67045 + stage II sporulation protein E identified by match to protein family HMM PF07228%3B match to protein family HMM TIGR02865 gene gene70 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5247 BCG9842_B5248 BCG9842_B5248 BCG9842_B5248 64244 64318 + tRNA-Glu tRNA gene69 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5248 BCG9842_B5249 BCG9842_B5249 BCG9842_B5249 64156 64234 + tRNA-Met tRNA gene68 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5249 BCG9842_B5250 BCG9842_B5250 BCG9842_B5250 63512 63997 + S1 RNA binding domain protein identified by match to protein family HMM PF00575 gene gene67 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5250 BCG9842_B5251 BCG9842_B5251 divIC1 divIC1 63065 63424 + cell division protein DivIC identified by match to protein family HMM PF04977 gene gene66 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5251 BCG9842_B5252 BCG9842_B5252 yabQ yabQ 62415 63068 + spore cortex biosynthesis protein YabQ identified by match to protein family HMM PF09578%3B match to protein family HMM TIGR02893 gene gene65 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5252 BCG9842_B5253 BCG9842_B5253 yabP yabP 62110 62418 + sporulation protein YabP identified by match to protein family HMM PF07873%3B match to protein family HMM TIGR02892 gene gene64 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5253 BCG9842_B5254 BCG9842_B5254 BCG9842_B5254 61776 62051 + S4 domain protein identified by match to protein family HMM PF01479 gene gene63 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5254 BCG9842_B5255 BCG9842_B5255 BCG9842_B5255 60301 61761 + tetrapyrrole methylase family protein/MazG family protein identified by match to protein family HMM PF00590%3B match to protein family HMM PF03819%3B match to protein family HMM TIGR00444 gene gene62 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5255 BCG9842_B5256 BCG9842_B5256 BCG9842_B5256 58687 60288 + polysaccharide synthase family protein identified by match to protein family HMM PF01943%3B match to protein family HMM PF03023 gene gene61 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5256 BCG9842_B5257 BCG9842_B5257 spoVT spoVT 57920 58456 + stage V sporulation protein T identified by match to protein family HMM PF04014%3B match to protein family HMM TIGR01439%3B match to protein family HMM TIGR02851 gene gene60 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5257 BCG9842_B5258 BCG9842_B5258 mfd mfd 54253 57783 + transcription-repair coupling factor identified by match to protein family HMM PF00270%3B match to protein family HMM PF00271%3B match to protein family HMM PF02559%3B match to protein family HMM PF03461%3B match to protein family HMM PF04851%3B match to protein family HMM TIGR00580 gene gene59 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5258 BCG9842_B5259 BCG9842_B5259 BCG9842_B5259 53923 54147 + conserved hypothetical protein gene gene58 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5259 BCG9842_B5260 BCG9842_B5260 spoVC spoVC 53229 53852 + peptidyl-tRNA hydrolase identified by match to protein family HMM PF01195%3B match to protein family HMM TIGR00447 gene gene57 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5260 BCG9842_B5261 BCG9842_B5261 prsA prsA 52266 53219 + ribose-phosphate pyrophosphokinase identified by match to protein family HMM PF00156%3B match to protein family HMM TIGR01251 gene gene56 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5261 BCG9842_B5262 BCG9842_B5262 gcaD gcaD 50868 52247 + UDP-N-acetylglucosamine pyrophosphorylase identified by match to protein family HMM PF00132%3B match to protein family HMM PF00483%3B match to protein family HMM TIGR01173 gene gene55 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5262 BCG9842_B5263 BCG9842_B5263 spoVG spoVG 50263 50556 + stage V sporulation protein G identified by match to protein family HMM PF04026 gene gene54 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5263 BCG9842_B5264 BCG9842_B5264 BCG9842_B5264 49736 50110 + putative endoribonuclease L-PSP identified by match to protein family HMM PF01042%3B match to protein family HMM TIGR00004 gene gene53 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5264 BCG9842_B5265 BCG9842_B5265 purR purR 48767 49615 + pur operon repressor identified by match to protein family HMM PF00156%3B match to protein family HMM PF09182%3B match to protein family HMM TIGR01743 gene gene52 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5265 BCG9842_B5266 BCG9842_B5266 ispE ispE 47843 48712 + 4-diphosphocytidyl-2C-methyl-D-erythritol kinase identified by match to protein family HMM PF00288%3B match to protein family HMM PF08544%3B match to protein family HMM TIGR00154 gene gene51 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5266 BCG9842_B5267 BCG9842_B5267 sspF sspF 47467 47646 + small%2C acid-soluble spore protein gene gene50 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5267 BCG9842_B5268 BCG9842_B5268 BCG9842_B5268 47115 47375 + veg protein identified by match to protein family HMM PF06257 gene gene49 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5268 BCG9842_B5269 BCG9842_B5269 BCG9842_B5269 46049 46888 + yabG protein identified by match to protein family HMM PF05582%3B match to protein family HMM TIGR02855 gene gene48 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5269 BCG9842_B5270 BCG9842_B5270 ksgA ksgA 45036 45914 + dimethyladenosine transferase identified by match to protein family HMM PF00398%3B match to protein family HMM TIGR00755 gene gene47 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5270 BCG9842_B5271 BCG9842_B5271 BCG9842_B5271 44482 45039 + primase-related protein identified by match to protein family HMM PF01751%3B match to protein family HMM TIGR00334 gene gene46 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5271 BCG9842_B5272 BCG9842_B5272 BCG9842_B5272 43499 44266 + deoxyribonuclease%2C TatD family identified by match to protein family HMM PF01026%3B match to protein family HMM TIGR00010 gene gene45 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5272 BCG9842_B5273 BCG9842_B5273 metS metS 41350 43332 + methionyl-tRNA synthetase identified by match to protein family HMM PF00133%3B match to protein family HMM PF01588%3B match to protein family HMM PF09334%3B match to protein family HMM TIGR00398%3B match to protein family HMM TIGR00399 gene gene44 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5273 BCG9842_B5274 BCG9842_B5274 abrB abrB 40579 40863 - transition state transcriptional regulatory protein AbrB identified by match to protein family HMM PF04014%3B match to protein family HMM TIGR01439 gene gene43 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5274 BCG9842_B5275 BCG9842_B5275 BCG9842_B5275 39683 40558 + tetrapyrrole methylase family protein identified by match to protein family HMM PF00590%3B match to protein family HMM TIGR00096 gene gene42 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5275 BCG9842_B5276 BCG9842_B5276 BCG9842_B5276 39451 39714 + conserved hypothetical protein identified by match to protein family HMM PF01541 gene gene41 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5276 BCG9842_B5277 BCG9842_B5277 BCG9842_B5277 38697 39437 + conserved hypothetical protein gene gene40 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5277 BCG9842_B5278 BCG9842_B5278 BCG9842_B5278 38264 38614 + conserved hypothetical protein identified by match to protein family HMM PF06156 gene gene39 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5278 BCG9842_B5279 BCG9842_B5279 BCG9842_B5279 37422 38249 + conserved hypothetical protein identified by match to protein family HMM PF04468 gene gene38 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5279 BCG9842_B5280 BCG9842_B5280 holB holB 36433 37416 + DNA polymerase III%2C delta prime subunit identified by match to protein family HMM TIGR00678 gene gene37 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5280 BCG9842_B5281 BCG9842_B5281 tmk tmk 35771 36397 + thymidylate kinase identified by match to protein family HMM PF02223%3B match to protein family HMM TIGR00041 gene gene36 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5281 BCG9842_B5282 BCG9842_B5282 BCG9842_B5282 34348 35769 + Orn/Lys/Arg decarboxylase family protein identified by match to protein family HMM PF01276%3B match to protein family HMM PF03711 gene gene35 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5282 BCG9842_B5283 BCG9842_B5283 BCG9842_B5283 34097 34276 + putative csfB protein gene gene34 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5283 BCG9842_B5284 BCG9842_B5284 rrf_12 rrf_12 33793 33908 + 5S ribosomal RNA rRNA gene33 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5284 BCG9842_B5285 BCG9842_B5285 rrl_12 rrl_12 30835 33742 + 23S ribosomal RNA rRNA gene32 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5285 BCG9842_B5287 BCG9842_B5287 BCG9842_B5287 30664 30741 + tRNA-Ala tRNA gene31 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5287 BCG9842_B5288 BCG9842_B5288 BCG9842_B5288 30579 30657 + tRNA-Ile tRNA gene30 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5288 BCG9842_B5289 BCG9842_B5289 rrs_12 rrs_12 28923 30431 + 16S ribosomal RNA rRNA gene29 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5289 BCG9842_B5290 BCG9842_B5290 bofA bofA 28409 28678 + sigma-k factor processing regulatory protein BofA identified by match to protein family HMM PF07441%3B match to protein family HMM TIGR02862 gene gene28 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5290 BCG9842_B5291 BCG9842_B5291 BCG9842_B5291 28025 28246 + conserved hypothetical protein gene gene27 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5291 BCG9842_B5292 BCG9842_B5292 recR recR 27414 28010 + recombination protein RecR identified by match to protein family HMM PF01751%3B match to protein family HMM PF02132%3B match to protein family HMM TIGR00615 gene gene26 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5292 BCG9842_B5293 BCG9842_B5293 BCG9842_B5293 27070 27399 + conserved hypothetical protein TIGR00103 identified by match to protein family HMM PF02575%3B match to protein family HMM TIGR00103 gene gene25 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5293 BCG9842_B5294 BCG9842_B5294 dnaX dnaX 25359 27047 + DNA polymerase III%2C gamma and tau subunits identified by match to protein family HMM PF00004%3B match to protein family HMM TIGR02397 gene gene24 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5294 BCG9842_B5295 BCG9842_B5295 srpB srpB 25075 25177 + Bacterial signal recognition particle RNA gene gene23 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5295 BCG9842_B5296 BCG9842_B5296 BCG9842_B5296 24382 24882 + cytidine/deoxycytidylate deaminase zinc-binding domain protein identified by match to protein family HMM PF00383 gene gene22 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5296 BCG9842_B5297 BCG9842_B5297 BCG9842_B5297 23735 24274 - isochorismatase family protein identified by match to protein family HMM PF00857 gene gene21 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5297 BCG9842_B5298 BCG9842_B5298 BCG9842_B5298 22974 23609 - deoxynucleoside kinase family protein identified by match to protein family HMM PF01712 gene gene20 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5298 BCG9842_B5299 BCG9842_B5299 BCG9842_B5299 22303 22971 - deoxynucleoside kinase family protein identified by match to protein family HMM PF01712 gene gene19 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5299 BCG9842_B5300 BCG9842_B5300 BCG9842_B5300 21875 22267 + hypothetical protein identified by glimmer%3B putative gene gene18 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5300 BCG9842_B5301 BCG9842_B5301 BCG9842_B5301 21616 21708 + tRNA-Ser tRNA gene17 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5301 BCG9842_B5302 BCG9842_B5302 serS serS 20187 21461 + seryl-tRNA synthetase identified by match to protein family HMM PF00587%3B match to protein family HMM PF02403%3B match to protein family HMM TIGR00414 gene gene16 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5302 BCG9842_B5303 BCG9842_B5303 BCG9842_B5303 19269 19859 + glutamine amidotransferase%2C SNO family identified by match to protein family HMM PF01174%3B match to protein family HMM PF07685 gene gene15 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5303 BCG9842_B5304 BCG9842_B5304 BCG9842_B5304 18363 19250 + pyridoxine biosynthesis protein identified by match to protein family HMM PF01680%3B match to protein family HMM TIGR00343 gene gene14 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5304 BCG9842_B5305 BCG9842_B5305 dacA dacA 16885 18201 + serine-type D-Ala-D-Ala carboxypeptidase DacA identified by match to protein family HMM PF00144%3B match to protein family HMM PF00768%3B match to protein family HMM PF07943 gene gene13 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5305 BCG9842_B5306 BCG9842_B5306 guaB guaB 15317 16780 + inosine-5'-monophosphate dehydrogenase identified by match to protein family HMM PF00478%3B match to protein family HMM PF00571%3B match to protein family HMM TIGR01302 gene gene12 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5306 BCG9842_B5307 BCG9842_B5307 BCG9842_B5307 14200 15201 - conserved hypothetical protein gene gene11 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5307 BCG9842_B5308 BCG9842_B5308 rrf_13 rrf_13 14050 14165 + 5S ribosomal RNA rRNA gene10 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5308 BCG9842_B5309 BCG9842_B5309 rrl_13 rrl_13 11094 14001 + 23S ribosomal RNA rRNA gene9 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5309 BCG9842_B5311 BCG9842_B5311 BCG9842_B5311 10923 11000 + tRNA-Ala tRNA gene8 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5311 BCG9842_B5312 BCG9842_B5312 BCG9842_B5312 10838 10916 + tRNA-Ile tRNA gene7 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5312 BCG9842_B5313 BCG9842_B5313 rrs_13 rrs_13 9182 10690 + 16S ribosomal RNA rRNA gene6 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5313 BCG9842_B5314 BCG9842_B5314 gyrA gyrA 6441 8912 + DNA gyrase%2C A subunit identified by match to protein family HMM PF00521%3B match to protein family HMM PF03989%3B match to protein family HMM TIGR01063 gene gene5 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5314 BCG9842_B5315 BCG9842_B5315 gyrB gyrB 4430 6352 + DNA gyrase%2C B subunit identified by match to protein family HMM PF00204%3B match to protein family HMM PF00986%3B match to protein family HMM PF01751%3B match to protein family HMM PF02518%3B match to protein family HMM TIGR01059 gene gene4 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5315 BCG9842_B5316 BCG9842_B5316 recF recF 3263 4390 + DNA replication and repair protein RecF identified by match to protein family HMM PF02463%3B match to protein family HMM TIGR00611 gene gene3 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5316 BCG9842_B5317 BCG9842_B5317 BCG9842_B5317 3038 3250 + conserved hypothetical protein identified by match to protein family HMM TIGR02988 gene gene2 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5317 BCG9842_B5318 BCG9842_B5318 dnaN1 dnaN1 1765 2910 + DNA polymerase III%2C beta subunit identified by match to protein family HMM PF00712%3B match to protein family HMM PF02767%3B match to protein family HMM PF02768%3B match to protein family HMM TIGR00663 gene gene1 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5318 BCG9842_B5319 BCG9842_B5319 dnaA dnaA 246 1586 + chromosomal replication initiator protein DnaA identified by match to protein family HMM PF00308%3B match to protein family HMM PF08299%3B match to protein family HMM TIGR00362 gene gene0 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5319 BCG9842_B5320 BCG9842_B5320 rpmH rpmH 5386881 5387015 - ribosomal protein L34 identified by match to protein family HMM PF00468%3B match to protein family HMM TIGR01030 gene gene5629 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5320 BCG9842_B5321 BCG9842_B5321 rnpA rnpA 5386457 5386804 - ribonuclease P protein component identified by match to protein family HMM PF00825%3B match to protein family HMM TIGR00188 gene gene5628 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5321 BCG9842_B5322 BCG9842_B5322 spoIIIJ2 spoIIIJ2 5385637 5386404 - stage III sporulation protein J identified by match to protein family HMM PF02096%3B match to protein family HMM TIGR03592 gene gene5627 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5322 BCG9842_B5323 BCG9842_B5323 jag jag 5385023 5385640 - jag protein identified by match to protein family HMM PF01424 gene gene5626 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5323 BCG9842_B5324 BCG9842_B5324 trmE trmE 5383420 5384796 - tRNA modification GTPase TrmE identified by match to protein family HMM PF01926%3B match to protein family HMM PF08477%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR00450 gene gene5625 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5324 BCG9842_B5325 BCG9842_B5325 gidA gidA 5381484 5383373 - tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA identified by match to protein family HMM PF01134%3B match to protein family HMM TIGR00136 gene gene5624 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5325 BCG9842_B5326 BCG9842_B5326 gidB gidB 5380743 5381462 - 16S rRNA methyltransferase GidB identified by match to protein family HMM PF02527%3B match to protein family HMM TIGR00138 gene gene5623 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5326 BCG9842_B5327 BCG9842_B5327 BCG9842_B5327 5379765 5380637 - putative stage 0 sporulation protein J identified by match to protein family HMM PF02195%3B match to protein family HMM TIGR00180 gene gene5622 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5327 BCG9842_B5328 BCG9842_B5328 soJ soJ 5378813 5379574 - sporulation initiation inhibitor protein Soj identified by match to protein family HMM PF01656 gene gene5621 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5328 BCG9842_B5329 BCG9842_B5329 spo0J spo0J 5377969 5378820 - stage 0 sporulation protein J identified by match to protein family HMM PF02195%3B match to protein family HMM TIGR00180 gene gene5620 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5329 BCG9842_B5330 BCG9842_B5330 BCG9842_B5330 5377352 5377948 + conserved hypothetical protein identified by match to protein family HMM PF06866%3B match to protein family HMM TIGR02841 gene gene5619 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5330 BCG9842_B5331 BCG9842_B5331 BCG9842_B5331 5376211 5377092 - mechanosensitive ion channel family protein identified by match to protein family HMM PF00924 gene gene5618 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5331 BCG9842_B5332 BCG9842_B5332 BCG9842_B5332 5375990 5376187 - conserved hypothetical protein identified by match to protein family HMM PF06107 gene gene5617 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5332 BCG9842_B5333 BCG9842_B5333 ychF ychF 5374774 5375874 - GTP-binding protein YchF identified by match to protein family HMM PF01926%3B match to protein family HMM PF06071%3B match to protein family HMM TIGR00092 gene gene5616 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5333 BCG9842_B5334 BCG9842_B5334 rpsF rpsF 5374292 5374582 - ribosomal protein S6 identified by match to protein family HMM PF01250%3B match to protein family HMM TIGR00166 gene gene5615 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5334 BCG9842_B5335 BCG9842_B5335 ssb1 ssb1 5373744 5374262 - single-stranded DNA-binding protein identified by match to protein family HMM PF00436%3B match to protein family HMM PF01336%3B match to protein family HMM TIGR00621 gene gene5614 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5335 BCG9842_B5336 BCG9842_B5336 rpsR rpsR 5373465 5373698 - ribosomal protein S18 identified by match to protein family HMM PF01084%3B match to protein family HMM TIGR00165 gene gene5613 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5336 BCG9842_B5337 BCG9842_B5337 BCG9842_B5337 5372450 5373385 - conserved hypothetical protein gene gene5612 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5337 BCG9842_B5338 BCG9842_B5338 BCG9842_B5338 5370398 5372371 - DHH subfamily 1 protein identified by match to protein family HMM PF01368%3B match to protein family HMM PF02272 gene gene5611 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5338 BCG9842_B5339 BCG9842_B5339 rplI rplI 5369955 5370401 - ribosomal protein L9 identified by match to protein family HMM PF01281%3B match to protein family HMM PF03948%3B match to protein family HMM TIGR00158 gene gene5610 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5339 BCG9842_B5340 BCG9842_B5340 BCG9842_B5340 5368578 5369927 - replicative DNA helicase identified by match to protein family HMM PF00772%3B match to protein family HMM PF03796%3B match to protein family HMM TIGR00665 gene gene5609 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5340 BCG9842_B5341 BCG9842_B5341 purA purA 5367073 5368362 - adenylosuccinate synthetase identified by match to protein family HMM PF00709%3B match to protein family HMM TIGR00184 gene gene5608 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5341 BCG9842_B5342 BCG9842_B5342 BCG9842_B5342 5366856 5366933 - tRNA-Lys tRNA gene5607 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5342 BCG9842_B5343 BCG9842_B5343 BCG9842_B5343 5366768 5366844 - tRNA-Glu tRNA gene5606 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5343 BCG9842_B5344 BCG9842_B5344 BCG9842_B5344 5366674 5366751 - tRNA-Asp tRNA gene5605 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5344 BCG9842_B5345 BCG9842_B5345 BCG9842_B5345 5366557 5366634 - tRNA-Phe tRNA gene5604 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5345 BCG9842_B5346 BCG9842_B5346 yycF yycF 5365572 5366279 - DNA-binding response regulator YycF identified by match to protein family HMM PF00072%3B match to protein family HMM PF00486 gene gene5603 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5346 BCG9842_B5347 BCG9842_B5347 yycG yycG 5363727 5365568 - sensory box histidine kinase YycG identified by match to protein family HMM PF00512%3B match to protein family HMM PF00672%3B match to protein family HMM PF00989%3B match to protein family HMM PF02518%3B match to protein family HMM TIGR00229 gene gene5602 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5347 BCG9842_B5348 BCG9842_B5348 BCG9842_B5348 5362414 5363730 - YycH protein identified by match to protein family HMM PF07435 gene gene5601 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5348 BCG9842_B5349 BCG9842_B5349 BCG9842_B5349 5361591 5362433 - yycI protein identified by match to protein family HMM PF09648 gene gene5600 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5349 BCG9842_B5350 BCG9842_B5350 BCG9842_B5350 5360813 5361607 - metallo-beta-lactamase family protein identified by match to protein family HMM PF00753 gene gene5599 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5350 BCG9842_B5351 BCG9842_B5351 BCG9842_B5351 5359574 5360749 - serine protease identified by match to protein family HMM PF00089 gene gene5598 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5351 BCG9842_B5352 BCG9842_B5352 BCG9842_B5352 5359335 5359520 - conserved hypothetical protein gene gene5597 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5352 BCG9842_B5353 BCG9842_B5353 BCG9842_B5353 5358796 5359275 - conserved hypothetical protein TIGR00246 identified by match to protein family HMM PF02590%3B match to protein family HMM TIGR00246 gene gene5596 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5353 BCG9842_B5354 BCG9842_B5354 BCG9842_B5354 5357716 5358657 - modification methylase HaeIII identified by match to protein family HMM PF00145%3B match to protein family HMM TIGR00675 gene gene5595 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5354 BCG9842_B5355 BCG9842_B5355 BCG9842_B5355 5356765 5357706 - modification methylase HaeIII identified by match to protein family HMM PF00145%3B match to protein family HMM TIGR00675 gene gene5594 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5355 BCG9842_B5356 BCG9842_B5356 BCG9842_B5356 5355691 5356716 + hypothetical protein identified by glimmer%3B putative gene gene5593 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5356 BCG9842_B5357 BCG9842_B5357 BCG9842_B5357 5355088 5355396 - hypothetical protein identified by glimmer%3B putative gene gene5592 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5357 BCG9842_B5358 BCG9842_B5358 BCG9842_B5358 5354491 5354856 - hypothetical protein identified by glimmer%3B putative gene gene5591 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5358 BCG9842_B5359 BCG9842_B5359 BCG9842_B5359 5352903 5354498 - phage/plasmid primase%2C P4 family%2C putative identified by match to protein family HMM PF08706%3B match to protein family HMM TIGR01613 gene gene5590 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5359 BCG9842_B5360 BCG9842_B5360 BCG9842_B5360 5351024 5352664 - resolvase domain protein identified by match to protein family HMM PF00239%3B match to protein family HMM PF07508 gene gene5589 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5360 BCG9842_B5361 BCG9842_B5361 BCG9842_B5361 5350415 5350777 - conserved hypothetical protein gene gene5588 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5361 BCG9842_B5362 BCG9842_B5362 BCG9842_B5362 5349953 5350243 - hypothetical protein identified by glimmer%3B putative gene gene5587 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5362 BCG9842_B5363 BCG9842_B5363 BCG9842_B5363 5348852 5349688 - hypothetical protein identified by glimmer%3B putative gene gene5586 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5363 BCG9842_B5364 BCG9842_B5364 BCG9842_B5364 5347585 5348832 - dgqhr domain%2C putative identified by match to protein family HMM TIGR03187 gene gene5585 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5364 BCG9842_B5365 BCG9842_B5365 BCG9842_B5365 5345442 5347460 - sensor histidine kinase an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a premature stop%3B identified by match to protein family HMM PF00512%3B match to protein family HMM PF01590%3B match to protein family HMM PF02518%3B match to protein family HMM TIGR00229 gene gene5584 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5365 BCG9842_B5366 BCG9842_B5366 BCG9842_B5366 5343695 5345167 - glycosyl hydrolase%2C BNR repeat-containing protein identified by match to protein family HMM PF02012 gene gene5583 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5366 BCG9842_B5367 BCG9842_B5367 BCG9842_B5367 5342657 5343496 - conserved hypothetical protein gene gene5582 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5367 BCG9842_B5368 BCG9842_B5368 BCG9842_B5368 5340802 5342619 + putative oligoendopeptidase F identified by match to protein family HMM PF01432%3B match to protein family HMM PF08439%3B match to protein family HMM TIGR00181 gene gene5581 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5368 BCG9842_B5369 BCG9842_B5369 guaC guaC 5339679 5340665 + guanosine monophosphate reductase identified by match to protein family HMM PF00478%3B match to protein family HMM TIGR01306 gene gene5580 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5369 BCG9842_B5370 BCG9842_B5370 BCG9842_B5370 5337758 5339203 - ATP-dependent RNA helicase%2C DEAD/DEAH box family identified by match to protein family HMM PF00270%3B match to protein family HMM PF00271%3B match to protein family HMM PF03880 gene gene5579 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5370 BCG9842_B5371 BCG9842_B5371 BCG9842_B5371 5337157 5337717 + conserved hypothetical protein identified by match to protein family HMM PF08876 gene gene5578 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5371 BCG9842_B5372 BCG9842_B5372 BCG9842_B5372 5336345 5336992 - channel protein%2C hemolysin III family identified by match to protein family HMM PF03006%3B match to protein family HMM TIGR01065 gene gene5577 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5372 BCG9842_B5373 BCG9842_B5373 galE_1 galE_1 5335142 5336158 - UDP-glucose 4-epimerase identified by match to protein family HMM PF00106%3B match to protein family HMM PF01073%3B match to protein family HMM PF01370%3B match to protein family HMM PF02719%3B match to protein family HMM PF04321%3B match to protein family HMM PF07993%3B match to protein family HMM TIGR01179 gene gene5576 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5373 BCG9842_B5374 BCG9842_B5374 BCG9842_B5374 5334690 5334839 - conserved hypothetical protein gene gene5575 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5374 BCG9842_B5375 BCG9842_B5375 BCG9842_B5375 5334172 5334573 + hypothetical protein identified by glimmer%3B putative gene gene5574 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5375 BCG9842_B5376 BCG9842_B5376 BCG9842_B5376 5333210 5333800 - putative transporter identified by match to protein family HMM PF02293 gene gene5573 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5376 BCG9842_B5377 BCG9842_B5377 BCG9842_B5377 5332220 5333107 - conserved hypothetical protein identified by match to protein family HMM PF01370%3B match to protein family HMM PF07993 gene gene5572 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5377 BCG9842_B5378 BCG9842_B5378 sodA2 sodA2 5331505 5332131 + superoxide dismutase%2C Mn identified by match to protein family HMM PF00081%3B match to protein family HMM PF02777 gene gene5571 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5378 BCG9842_B5379 BCG9842_B5379 nos nos 5330218 5331288 - nitric-oxide synthase%2C oxygenase subunit identified by match to protein family HMM PF02898 gene gene5570 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5379 BCG9842_B5380 BCG9842_B5380 BCG9842_B5380 5328290 5329858 - osmoprotectant transporter%2C BCCT family identified by match to protein family HMM PF02028 gene gene5569 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5380 BCG9842_B5381 BCG9842_B5381 BCG9842_B5381 5326939 5328237 + transporter%2C MFS superfamily identified by match to protein family HMM PF00083%3B match to protein family HMM PF07690 gene gene5568 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5381 BCG9842_B5383 BCG9842_B5383 BCG9842_B5383 5324845 5326413 - sensor histidine kinase LytS identified by match to protein family HMM PF01590%3B match to protein family HMM PF02518%3B match to protein family HMM PF06580%3B match to protein family HMM PF07694 gene gene5567 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5383 BCG9842_B5384 BCG9842_B5384 BCG9842_B5384 5324127 5324867 - response regulator LytR identified by match to protein family HMM PF00072%3B match to protein family HMM PF04397 gene gene5566 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5384 BCG9842_B5385 BCG9842_B5385 BCG9842_B5385 5323563 5323994 - putative holin identified by match to protein family HMM PF03788 gene gene5565 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5385 BCG9842_B5386 BCG9842_B5386 BCG9842_B5386 5322835 5323527 - putative membrane protein identified by match to protein family HMM PF04172 gene gene5564 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5386 BCG9842_B5387 BCG9842_B5387 BCG9842_B5387 5321477 5322421 - putative membrane protein identified by match to protein family HMM PF01594 gene gene5563 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5387 BCG9842_B5388 BCG9842_B5388 msrAB msrAB 5320410 5321375 - peptide methionine sulfoxide reductase identified by match to protein family HMM PF01625%3B match to protein family HMM PF01641%3B match to protein family HMM TIGR00357%3B match to protein family HMM TIGR00401 gene gene5562 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5388 BCG9842_B5389 BCG9842_B5389 BCG9842_B5389 5317265 5320381 + transporter%2C AcrB/AcrD/AcrF family identified by match to protein family HMM PF00873 gene gene5561 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5389 BCG9842_B5390 BCG9842_B5390 BCG9842_B5390 5316249 5317124 - transcriptional regulator%2C TetR family identified by match to protein family HMM PF00440 gene gene5560 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5390 BCG9842_B5391 BCG9842_B5391 BCG9842_B5391 5314654 5316207 + ABC transporter ATP-binding protein uup identified by match to protein family HMM PF00005 gene gene5559 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5391 BCG9842_B5392 BCG9842_B5392 BCG9842_B5392 5313912 5314484 - transcriptional regulator%2C TetR family protein identified by match to protein family HMM PF00440 gene gene5558 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5392 BCG9842_B5393 BCG9842_B5393 BCG9842_B5393 5312914 5313852 - NAD-dependent epimerase/dehydratase identified by match to protein family HMM PF01073%3B match to protein family HMM PF01370 gene gene5557 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5393 BCG9842_B5394 BCG9842_B5394 BCG9842_B5394 5311926 5312864 + bactoprenol glucosyl transferase identified by match to protein family HMM PF00535 gene gene5556 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5394 BCG9842_B5395 BCG9842_B5395 BCG9842_B5395 5309163 5311829 + multidrug resistance protein B identified by match to protein family HMM PF09586 gene gene5555 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5395 BCG9842_B5396 BCG9842_B5396 BCG9842_B5396 5307432 5308853 + oligosaccharide translocase identified by match to protein family HMM PF01943 gene gene5554 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5396 BCG9842_B5397 BCG9842_B5397 BCG9842_B5397 5306354 5307334 + beta-1%2C3-N-acetylglucosaminyltransferase identified by match to protein family HMM PF00535 gene gene5553 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5397 BCG9842_B5398 BCG9842_B5398 BCG9842_B5398 5304851 5306128 - conserved hypothetical protein gene gene5552 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5398 BCG9842_B5399 BCG9842_B5399 BCG9842_B5399 5304418 5304774 + conserved hypothetical protein gene gene5551 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5399 BCG9842_B5400 BCG9842_B5400 BCG9842_B5400 5303683 5304411 + glycosyl transferase family 2 identified by match to protein family HMM PF00535 gene gene5550 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5400 BCG9842_B5401 BCG9842_B5401 BCG9842_B5401 5302953 5303465 + YkhA identified by match to protein family HMM PF03061 gene gene5549 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5401 BCG9842_B5402 BCG9842_B5402 BCG9842_B5402 5301341 5302654 - putative membrane protein gene gene5548 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5402 BCG9842_B5403 BCG9842_B5403 BCG9842_B5403 5299948 5301252 + methyl-accepting chemotaxis protein identified by match to protein family HMM PF00015 gene gene5547 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5403 BCG9842_B5404 BCG9842_B5404 BCG9842_B5404 5299184 5299816 + putative membrane protein identified by match to protein family HMM PF03458 gene gene5546 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5404 BCG9842_B5405 BCG9842_B5405 BCG9842_B5405 5297247 5298719 - group-specific protein gene gene5545 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5405 BCG9842_B5406 BCG9842_B5406 BCG9842_B5406 5296042 5297151 - glycosyltransferase identified by match to protein family HMM PF00534 gene gene5544 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5406 BCG9842_B5407 BCG9842_B5407 BCG9842_B5407 5295280 5296020 - glycosyl transferase%2C WecB/TagA/CpsF family identified by match to protein family HMM PF03808%3B match to protein family HMM TIGR00696 gene gene5543 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5407 BCG9842_B5408 BCG9842_B5408 BCG9842_B5408 5295033 5295173 + conserved hypothetical protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift gene gene5542 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5408 BCG9842_B5409 BCG9842_B5409 BCG9842_B5409 5293865 5295064 - major facilitator family transporter identified by match to protein family HMM PF00083%3B match to protein family HMM PF07690 gene gene5541 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5409 BCG9842_B5410 BCG9842_B5410 BCG9842_B5410 5292930 5293646 - putative response regulator identified by match to protein family HMM PF00072%3B match to protein family HMM PF04397 gene gene5540 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5410 BCG9842_B5411 BCG9842_B5411 cstA cstA 5290729 5292807 - carbon starvation protein A identified by match to protein family HMM PF02554 gene gene5539 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5411 BCG9842_B5412 BCG9842_B5412 BCG9842_B5412 5290533 5290736 - conserved hypothetical protein identified by match to protein family HMM PF04328 gene gene5538 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5412 BCG9842_B5413 BCG9842_B5413 BCG9842_B5413 5290445 5290567 - hypothetical protein identified by glimmer%3B putative gene gene5537 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5413 BCG9842_B5414 BCG9842_B5414 BCG9842_B5414 5289327 5290385 - ggdef family protein identified by match to protein family HMM PF00990%3B match to protein family HMM PF07694%3B match to protein family HMM TIGR00254 gene gene5536 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5414 BCG9842_B5415 BCG9842_B5415 thiD2 thiD2 5288417 5289241 + phosphomethylpyrimidine kinase identified by match to protein family HMM PF08543%3B match to protein family HMM TIGR00097 gene gene5535 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5415 BCG9842_B5416 BCG9842_B5416 BCG9842_B5416 5286732 5288282 - sensor histidine kinase identified by match to protein family HMM PF01590%3B match to protein family HMM PF02518%3B match to protein family HMM PF07730 gene gene5534 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5416 BCG9842_B5417 BCG9842_B5417 BCG9842_B5417 5286064 5286711 - DNA-binding response regulator identified by match to protein family HMM PF00072%3B match to protein family HMM PF00196 gene gene5533 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5417 BCG9842_B5418 BCG9842_B5418 BCG9842_B5418 5285246 5285872 - conserved hypothetical protein identified by match to protein family HMM PF02525 gene gene5532 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5418 BCG9842_B5419 BCG9842_B5419 BCG9842_B5419 5284515 5285186 + catabolite gene activator identified by match to protein family HMM PF00027 gene gene5531 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5419 BCG9842_B5420 BCG9842_B5420 BCG9842_B5420 5283712 5284407 - HAD superfamily (subfamily IA) hydrolase identified by match to protein family HMM PF00702%3B match to protein family HMM TIGR01549%3B match to protein family HMM TIGR02254 gene gene5530 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5420 BCG9842_B5422 BCG9842_B5422 BCG9842_B5422 5282033 5283331 - O-acetylhomoserine/O-acetylserine sulfhydrylase identified by match to protein family HMM PF01053%3B match to protein family HMM TIGR01326 gene gene5529 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5422 BCG9842_B5423 BCG9842_B5423 metA metA 5281144 5282049 - homoserine O-succinyltransferase identified by match to protein family HMM PF04204%3B match to protein family HMM TIGR01001 gene gene5528 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5423 BCG9842_B5424 BCG9842_B5424 hom2 hom2 5279707 5281002 - homoserine dehydrogenase identified by match to protein family HMM PF00742%3B match to protein family HMM PF01842%3B match to protein family HMM PF03447 gene gene5527 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5424 BCG9842_B5425 BCG9842_B5425 BCG9842_B5425 5279050 5279676 + conserved hypothetical protein identified by match to protein family HMM PF02588 gene gene5526 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5425 BCG9842_B5426 BCG9842_B5426 BCG9842_B5426 5277975 5278952 - sugar-binding transcriptional regulator%2C LacI family identified by match to protein family HMM PF00356%3B match to protein family HMM PF00532 gene gene5525 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5426 BCG9842_B5427 BCG9842_B5427 BCG9842_B5427 5277083 5277892 - putative lipase/acylhydrolase identified by match to protein family HMM PF00657 gene gene5524 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5427 BCG9842_B5428 BCG9842_B5428 BCG9842_B5428 5276169 5277086 - ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005 gene gene5523 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5428 BCG9842_B5429 BCG9842_B5429 BCG9842_B5429 5275184 5276176 - ABC transporter%2C permease protein gene gene5522 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5429 BCG9842_B5430 BCG9842_B5430 ung ung 5274487 5275164 - uracil-DNA glycosylase identified by match to protein family HMM PF03167%3B match to protein family HMM TIGR00628 gene gene5521 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5430 BCG9842_B5431 BCG9842_B5431 BCG9842_B5431 5274155 5274445 + conserved hypothetical protein gene gene5520 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5431 BCG9842_B5432 BCG9842_B5432 BCG9842_B5432 5273124 5273945 + hydrolase%2C haloacid dehalogenase-like family identified by match to protein family HMM PF00702%3B match to protein family HMM PF08282%3B match to protein family HMM TIGR00099%3B match to protein family HMM TIGR01484 gene gene5519 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5432 BCG9842_B5433 BCG9842_B5433 BCG9842_B5433 5271612 5272895 + xanthine/uracil permease family protein identified by match to protein family HMM PF00860 gene gene5518 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5433 BCG9842_B5434 BCG9842_B5434 BCG9842_B5434 5270503 5271516 - potassium uptake protein%2C TrkA family identified by match to protein family HMM PF02080%3B match to protein family HMM PF02254%3B match to protein family HMM PF07885 gene gene5517 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5434 BCG9842_B5435 BCG9842_B5435 BCG9842_B5435 5270209 5270496 - conserved hypothetical protein gene gene5516 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5435 BCG9842_B5436 BCG9842_B5436 BCG9842_B5436 5269776 5270144 - conserved hypothetical protein identified by match to protein family HMM PF04241 gene gene5515 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5436 BCG9842_B5437 BCG9842_B5437 gerQ gerQ 5269316 5269744 + spore coat protein GerQ identified by match to protein family HMM PF09671%3B match to protein family HMM TIGR02728 gene gene5514 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5437 BCG9842_B5438 BCG9842_B5438 cwlJ2 cwlJ2 5268866 5269288 + cell wall hydrolase identified by match to protein family HMM PF07486 gene gene5513 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5438 BCG9842_B5439 BCG9842_B5439 BCG9842_B5439 5267264 5268535 + putative D-alanyl-D-alanine carboxypeptidase identified by match to protein family HMM PF00768%3B match to protein family HMM PF07943 gene gene5512 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5439 BCG9842_B5440 BCG9842_B5440 BCG9842_B5440 5266317 5267060 + conserved hypothetical protein identified by match to protein family HMM PF06778 gene gene5511 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5440 BCG9842_B5441 BCG9842_B5441 pta pta 5265065 5266036 - phosphate acetyltransferase identified by match to protein family HMM PF01515%3B match to protein family HMM TIGR00651 gene gene5510 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5441 BCG9842_B5442 BCG9842_B5442 BCG9842_B5442 5264171 5265016 + putative lipoate-protein ligase A identified by match to protein family HMM PF03099 gene gene5509 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5442 BCG9842_B5443 BCG9842_B5443 BCG9842_B5443 5263349 5264041 + conserved hypothetical protein identified by match to protein family HMM TIGR02894 gene gene5508 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5443 BCG9842_B5444 BCG9842_B5444 BCG9842_B5444 5262840 5263064 - conserved hypothetical protein gene gene5507 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5444 BCG9842_B5445 BCG9842_B5445 BCG9842_B5445 5261473 5262528 - iron compound ABC transporter%2C permease protein identified by match to protein family HMM PF01032 gene gene5506 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5445 BCG9842_B5446 BCG9842_B5446 BCG9842_B5446 5260460 5261476 - iron compound ABC transporter%2C permease protein identified by match to protein family HMM PF01032 gene gene5505 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5446 BCG9842_B5447 BCG9842_B5447 BCG9842_B5447 5259632 5260444 - iron compound ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005 gene gene5504 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5447 BCG9842_B5448 BCG9842_B5448 BCG9842_B5448 5258503 5259441 - iron compound ABC transporter%2C iron compound-binding protein identified by match to protein family HMM PF01497 gene gene5503 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5448 BCG9842_B5449 BCG9842_B5449 BCG9842_B5449 5257053 5258357 - HD domain protein identified by match to protein family HMM PF01966 gene gene5502 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5449 BCG9842_B5450 BCG9842_B5450 BCG9842_B5450 5256828 5257013 + 4-oxalocrotonate tautomerase identified by match to protein family HMM PF01361%3B match to protein family HMM TIGR00013 gene gene5501 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5450 BCG9842_B5451 BCG9842_B5451 BCG9842_B5451 5256041 5256715 - peptidase%2C M50 family identified by match to protein family HMM PF02163 gene gene5500 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5451 BCG9842_B5452 BCG9842_B5452 BCG9842_B5452 5255506 5256015 - conserved hypothetical protein identified by match to protein family HMM PF08741 gene gene5499 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5452 BCG9842_B5453 BCG9842_B5453 BCG9842_B5453 5253420 5255471 + penicillin-binding protein identified by match to protein family HMM PF00905%3B match to protein family HMM PF00912%3B match to protein family HMM TIGR02074 gene gene5498 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5453 BCG9842_B5454 BCG9842_B5454 BCG9842_B5454 5252593 5253318 + glycerophosphoryl diester phosphodiesterase family protein identified by match to protein family HMM PF03009 gene gene5497 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5454 BCG9842_B5455 BCG9842_B5455 BCG9842_B5455 5252473 5252592 - hypothetical protein identified by glimmer%3B putative gene gene5496 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5455 BCG9842_B5456 BCG9842_B5456 BCG9842_B5456 5252033 5252440 - transcriptional regulator%2C MerR family identified by match to protein family HMM PF00376%3B match to protein family HMM PF09278 gene gene5495 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5456 BCG9842_B5457 BCG9842_B5457 BCG9842_B5457 5250864 5252027 - putative multidrug resistance protein identified by match to protein family HMM PF07690 gene gene5494 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5457 BCG9842_B5458 BCG9842_B5458 speE speE 5249872 5250699 - spermidine synthase identified by match to protein family HMM PF01564%3B match to protein family HMM TIGR00417 gene gene5493 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5458 BCG9842_B5459 BCG9842_B5459 BCG9842_B5459 5249698 5249811 - hypothetical protein identified by glimmer%3B putative gene gene5492 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5459 BCG9842_B5460 BCG9842_B5460 BCG9842_B5460 5248780 5249652 - putative agmatinase identified by match to protein family HMM PF00491%3B match to protein family HMM TIGR01230 gene gene5491 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5460 BCG9842_B5461 BCG9842_B5461 BCG9842_B5461 5247491 5248528 + membrane protein PfoR gene gene5490 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5461 BCG9842_B5462 BCG9842_B5462 BCG9842_B5462 5246894 5247256 - conserved hypothetical protein identified by match to protein family HMM PF06486%3B match to protein family HMM TIGR01655 gene gene5489 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5462 BCG9842_B5463 BCG9842_B5463 BCG9842_B5463 5245882 5246868 + conserved hypothetical protein identified by match to protein family HMM PF02016 gene gene5488 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5463 BCG9842_B5464 BCG9842_B5464 BCG9842_B5464 5245242 5245679 - conserved hypothetical protein identified by match to protein family HMM PF09148 gene gene5487 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5464 BCG9842_B5465 BCG9842_B5465 argS2 argS2 5243572 5245242 - arginyl-tRNA synthetase identified by match to protein family HMM PF00750%3B match to protein family HMM PF03485%3B match to protein family HMM PF05746%3B match to protein family HMM TIGR00456 gene gene5486 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5465 BCG9842_B5466 BCG9842_B5466 BCG9842_B5466 5242770 5243297 - RNA polymerase sigma-70 factor%2C ECF subfamily identified by match to protein family HMM PF04542%3B match to protein family HMM PF04545%3B match to protein family HMM PF08281%3B match to protein family HMM TIGR02937 gene gene5485 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5466 BCG9842_B5467 BCG9842_B5467 BCG9842_B5467 5242469 5242783 - hypothetical protein identified by glimmer%3B putative gene gene5484 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5467 BCG9842_B5468 BCG9842_B5468 BCG9842_B5468 5241814 5242485 - conserved domain protein gene gene5483 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5468 BCG9842_B5469 BCG9842_B5469 BCG9842_B5469 5241413 5241787 + hypothetical protein identified by glimmer%3B putative gene gene5482 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5469 BCG9842_B5470 BCG9842_B5470 BCG9842_B5470 5239866 5241266 + putative aminopeptidase identified by match to protein family HMM PF01546%3B match to protein family HMM PF02225%3B match to protein family HMM PF04389 gene gene5481 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5470 BCG9842_B5471 BCG9842_B5471 BCG9842_B5471 5229804 5239376 + lpxtg-motif cell wall anchor domain protein identified by match to protein family HMM PF00746%3B match to protein family HMM PF05737%3B match to protein family HMM PF05738%3B match to protein family HMM TIGR01167 gene gene5480 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5471 BCG9842_B5472 BCG9842_B5472 BCG9842_B5472 5229644 5229757 - hypothetical protein identified by glimmer%3B putative gene gene5479 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5472 BCG9842_B5473 BCG9842_B5473 maP3 maP3 5228278 5229024 + methionine aminopeptidase identified by match to protein family HMM PF00557%3B match to protein family HMM TIGR00500 gene gene5478 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5473 BCG9842_B5474 BCG9842_B5474 BCG9842_B5474 5227170 5228072 - ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005 gene gene5477 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5474 BCG9842_B5475 BCG9842_B5475 BCG9842_B5475 5226439 5227173 - putative ABC transporter%2C permease protein identified by match to protein family HMM PF01061 gene gene5476 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5475 BCG9842_B5476 BCG9842_B5476 BCG9842_B5476 5225308 5226438 - sensor histidine kinase identified by match to protein family HMM PF02518%3B match to protein family HMM PF07730 gene gene5475 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5476 BCG9842_B5477 BCG9842_B5477 BCG9842_B5477 5224709 5225311 - DNA-binding response regulator identified by match to protein family HMM PF00072%3B match to protein family HMM PF00196 gene gene5474 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5477 BCG9842_B5478 BCG9842_B5478 BCG9842_B5478 5222917 5224668 + neutral protease B identified by match to protein family HMM PF01447%3B match to protein family HMM PF02868%3B match to protein family HMM PF03413%3B match to protein family HMM PF07504 gene gene5473 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5478 BCG9842_B5479 BCG9842_B5479 BCG9842_B5479 5221891 5222748 - putative transcriptional regulator PlcR identified by match to protein family HMM PF01381 gene gene5472 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5479 BCG9842_B5480 BCG9842_B5480 papR papR 5221656 5221802 - PlcR associated protein%2C PapR identified by match to protein family HMM PF05968 gene gene5471 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5480 BCG9842_B5481 BCG9842_B5481 BCG9842_B5481 5219432 5221639 + sensory box/GGDEF family protein identified by match to protein family HMM PF00563%3B match to protein family HMM PF00989%3B match to protein family HMM PF00990%3B match to protein family HMM TIGR00229%3B match to protein family HMM TIGR00254 gene gene5470 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5481 BCG9842_B5482 BCG9842_B5482 BCG9842_B5482 5217884 5218837 + putative UV-endonuclease identified by match to protein family HMM PF03851%3B match to protein family HMM TIGR00629 gene gene5469 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5482 BCG9842_B5483 BCG9842_B5483 BCG9842_B5483 5216736 5217851 + cardiolipin synthetase identified by match to protein family HMM PF00614 gene gene5468 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5483 BCG9842_B5484 BCG9842_B5484 BCG9842_B5484 5214177 5216066 - ferredoxin%2C 4Fe-4S identified by match to protein family HMM PF02754 gene gene5467 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5484 BCG9842_B5485 BCG9842_B5485 BCG9842_B5485 5212884 5214167 - acetyl-CoA acetyltransferase identified by match to protein family HMM PF00108%3B match to protein family HMM PF02803%3B match to protein family HMM TIGR01930 gene gene5466 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5485 BCG9842_B5486 BCG9842_B5486 BCG9842_B5486 5211983 5212834 - 3-hydroxyacyl-CoA dehydrogenase identified by match to protein family HMM PF00725%3B match to protein family HMM PF02737 gene gene5465 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5486 BCG9842_B5487 BCG9842_B5487 BCG9842_B5487 5210779 5211924 - acyl-CoA dehydrogenase identified by match to protein family HMM PF00441%3B match to protein family HMM PF02770%3B match to protein family HMM PF02771%3B match to protein family HMM PF08028 gene gene5464 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5487 BCG9842_B5488 BCG9842_B5488 BCG9842_B5488 5209618 5210757 - acyl-CoA dehydrogenase identified by match to protein family HMM PF00441%3B match to protein family HMM PF02770%3B match to protein family HMM PF02771%3B match to protein family HMM PF08028 gene gene5463 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5488 BCG9842_B5489 BCG9842_B5489 BCG9842_B5489 5208922 5209551 - transcriptional regulator%2C TetR family identified by match to protein family HMM PF00440 gene gene5462 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5489 BCG9842_B5490 BCG9842_B5490 rpoE rpoE 5208233 5208766 - DNA-directed RNA polymerase%2C delta subunit identified by match to protein family HMM PF05066 gene gene5461 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5490 BCG9842_B5491 BCG9842_B5491 pyrG pyrG 5206368 5207975 - CTP synthase identified by match to protein family HMM PF00117%3B match to protein family HMM PF06418%3B match to protein family HMM TIGR00337 gene gene5460 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5491 BCG9842_B5492 BCG9842_B5492 BCG9842_B5492 5205803 5206327 + conserved hypothetical protein gene gene5459 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5492 BCG9842_B5493 BCG9842_B5493 spo0F spo0F 5205233 5205601 - sporulation initiation phosphotransferase F identified by match to protein family HMM PF00072 gene gene5458 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5493 BCG9842_B5494 BCG9842_B5494 fba2 fba2 5204165 5205022 - fructose-bisphosphate aldolase%2C class II identified by match to protein family HMM PF01116%3B match to protein family HMM TIGR00167%3B match to protein family HMM TIGR01859 gene gene5457 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5494 BCG9842_B5495 BCG9842_B5495 murA2 murA2 5202394 5203683 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2 identified by match to protein family HMM PF00275%3B match to protein family HMM TIGR01072 gene gene5456 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5495 BCG9842_B5496 BCG9842_B5496 fbp2 fbp2 5201312 5202277 - fructose-1%2C6-bisphosphatase%2C class II identified by match to protein family HMM PF03320%3B match to protein family HMM TIGR00330 gene gene5455 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5496 BCG9842_B5497 BCG9842_B5497 rho rho 5199402 5200673 - transcription termination factor Rho identified by match to protein family HMM PF00006%3B match to protein family HMM PF07497%3B match to protein family HMM PF07498%3B match to protein family HMM TIGR00767 gene gene5454 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5497 BCG9842_B5498 BCG9842_B5498 rpmE rpmE 5198879 5199124 - ribosomal protein L31 identified by match to protein family HMM PF01197%3B match to protein family HMM TIGR00105 gene gene5453 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5498 BCG9842_B5499 BCG9842_B5499 tdk tdk 5198183 5198770 - thymidine kinase identified by match to protein family HMM PF00265 gene gene5452 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5499 BCG9842_B5500 BCG9842_B5500 prfA prfA 5196849 5197925 - peptide chain release factor 1 identified by match to protein family HMM PF00472%3B match to protein family HMM PF03462%3B match to protein family HMM TIGR00019 gene gene5451 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5500 BCG9842_B5501 BCG9842_B5501 hemK hemK 5195998 5196849 - protein-(glutamine-N5) methyltransferase%2C release factor-specific identified by match to protein family HMM PF01170%3B match to protein family HMM PF05175%3B match to protein family HMM TIGR00536%3B match to protein family HMM TIGR03534 gene gene5450 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5501 BCG9842_B5502 BCG9842_B5502 BCG9842_B5502 5195022 5195894 - putative stage II sporulation protein R identified by match to protein family HMM PF09551%3B match to protein family HMM TIGR02837 gene gene5449 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5502 BCG9842_B5503 BCG9842_B5503 BCG9842_B5503 5194514 5194972 - conserved hypothetical protein gene gene5448 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5503 BCG9842_B5504 BCG9842_B5504 BCG9842_B5504 5193365 5194405 - sua5/yciO/yrdC/ywlC family protein identified by match to protein family HMM PF01300%3B match to protein family HMM PF03481%3B match to protein family HMM TIGR00057 gene gene5447 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5504 BCG9842_B5505 BCG9842_B5505 BCG9842_B5505 5192739 5193287 - putative membrane protein identified by match to protein family HMM PF02659 gene gene5446 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5505 BCG9842_B5506 BCG9842_B5506 BCG9842_B5506 5192228 5192506 - hypothetical protein identified by glimmer%3B putative gene gene5445 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5506 BCG9842_B5507 BCG9842_B5507 BCG9842_B5507 5191412 5192023 + conserved hypothetical protein gene gene5444 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5507 BCG9842_B5508 BCG9842_B5508 BCG9842_B5508 5190867 5191253 + conserved hypothetical protein identified by match to protein family HMM PF07681 gene gene5443 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5508 BCG9842_B5509 BCG9842_B5509 BCG9842_B5509 5189982 5190479 - putative PTS system%2C glucose-specific IIA component identified by match to protein family HMM PF00358%3B match to protein family HMM TIGR00830 gene gene5442 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5509 BCG9842_B5510 BCG9842_B5510 BCG9842_B5510 5189299 5189739 - low molecular weight phosphotyrosine protein phosphatase family protein identified by match to protein family HMM PF01451 gene gene5441 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5510 BCG9842_B5511 BCG9842_B5511 BCG9842_B5511 5188759 5189202 - sugar-phosphate isomerase%2C RpiB/LacA/LacB family identified by match to protein family HMM PF02502%3B match to protein family HMM TIGR00689%3B match to protein family HMM TIGR01120 gene gene5440 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5511 BCG9842_B5512 BCG9842_B5512 BCG9842_B5512 5188120 5188692 - putative lipoprotein identified by match to protein family HMM PF04260%3B match to protein family HMM TIGR01440 gene gene5439 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5512 BCG9842_B5513 BCG9842_B5513 glyA glyA 5186625 5187866 - serine hydroxymethyltransferase identified by match to protein family HMM PF00155%3B match to protein family HMM PF00464%3B match to protein family HMM PF01212 gene gene5438 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5513 BCG9842_B5514 BCG9842_B5514 upp upp 5185723 5186352 - uracil phosphoribosyltransferase identified by match to protein family HMM PF00156%3B match to protein family HMM TIGR01091 gene gene5437 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5514 BCG9842_B5515 BCG9842_B5515 BCG9842_B5515 5185235 5185348 - hypothetical protein identified by glimmer%3B putative gene gene5436 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5515 BCG9842_B5516 BCG9842_B5516 BCG9842_B5516 5184984 5185208 - conserved hypothetical protein gene gene5435 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5516 BCG9842_B5517 BCG9842_B5517 atpI atpI 5184592 5184984 - ATP synthase protein I identified by match to protein family HMM PF05468 gene gene5434 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5517 BCG9842_B5518 BCG9842_B5518 atpB atpB 5183865 5184584 - ATP synthase F0%2C A subunit identified by match to protein family HMM PF00119%3B match to protein family HMM TIGR01131 gene gene5433 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5518 BCG9842_B5519 BCG9842_B5519 atpE atpE 5183590 5183808 - ATP synthase F0%2C C subunit identified by match to protein family HMM PF00137%3B match to protein family HMM TIGR01260 gene gene5432 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5519 BCG9842_B5520 BCG9842_B5520 atpF atpF 5182954 5183460 - ATP synthase F0%2C B subunit identified by match to protein family HMM PF00430%3B match to protein family HMM TIGR01144 gene gene5431 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5520 BCG9842_B5521 BCG9842_B5521 atpH atpH 5182415 5182957 - ATP synthase F1%2C delta subunit identified by match to protein family HMM PF00213%3B match to protein family HMM TIGR01145 gene gene5430 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5521 BCG9842_B5522 BCG9842_B5522 atpA atpA 5180895 5182403 - ATP synthase F1%2C alpha subunit identified by match to protein family HMM PF00006%3B match to protein family HMM PF00306%3B match to protein family HMM PF02874%3B match to protein family HMM PF09378%3B match to protein family HMM TIGR00962 gene gene5429 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5522 BCG9842_B5523 BCG9842_B5523 atpG atpG 5179783 5180643 - ATP synthase F1%2C gamma subunit identified by match to protein family HMM PF00231%3B match to protein family HMM TIGR01146 gene gene5428 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5523 BCG9842_B5524 BCG9842_B5524 atpD atpD 5177894 5179300 - ATP synthase F1%2C beta subunit identified by match to protein family HMM PF00006%3B match to protein family HMM PF00306%3B match to protein family HMM PF02874%3B match to protein family HMM TIGR01039 gene gene5427 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5524 BCG9842_B5525 BCG9842_B5525 atpC atpC 5177472 5177873 - ATP synthase F1%2C epsilon subunit identified by match to protein family HMM PF00401%3B match to protein family HMM PF02823%3B match to protein family HMM TIGR01216 gene gene5426 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5525 BCG9842_B5526 BCG9842_B5526 BCG9842_B5526 5176548 5177333 - group-specific protein identified by match to protein family HMM PF06161 gene gene5425 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5526 BCG9842_B5527 BCG9842_B5527 BCG9842_B5527 5175859 5176503 - integral membrane protein identified by match to protein family HMM PF06161 gene gene5424 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5527 BCG9842_B5528 BCG9842_B5528 BCG9842_B5528 5173106 5175835 + sensory box/GGDEF family protein identified by match to protein family HMM PF00563%3B match to protein family HMM PF00989%3B match to protein family HMM PF00990%3B match to protein family HMM PF08447%3B match to protein family HMM PF08448%3B match to protein family HMM TIGR00229%3B match to protein family HMM TIGR00254 gene gene5423 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5528 BCG9842_B5529 BCG9842_B5529 nuoA nuoA 5172483 5172851 - NADH dehydrogenase (ubiquinone)%2C A subunit identified by match to protein family HMM PF00507 gene gene5422 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5529 BCG9842_B5530 BCG9842_B5530 nuoB nuoB 5171974 5172492 - NADH dehydrogenase (ubiquinone)%2C B subunit identified by match to protein family HMM PF01058%3B match to protein family HMM TIGR01957 gene gene5421 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5530 BCG9842_B5531 BCG9842_B5531 BCG9842_B5531 5170739 5171977 - NADH dehydrogenase subunit c identified by match to protein family HMM PF00329%3B match to protein family HMM TIGR01961 gene gene5420 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5531 BCG9842_B5532 BCG9842_B5532 nuoD nuoD 5169636 5170736 - NADH dehydrogenase (quinone)%2C d subunit identified by match to protein family HMM PF00346%3B match to protein family HMM TIGR01962 gene gene5419 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5532 BCG9842_B5533 BCG9842_B5533 nuoH nuoH 5168635 5169636 - NADH dehydrogenase (ubiquinone)%2C H subunit identified by match to protein family HMM PF00146 gene gene5418 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5533 BCG9842_B5534 BCG9842_B5534 nuoI nuoI 5168190 5168609 - NADH dehydrogenase (ubiquinone)%2C I subunit identified by match to protein family HMM PF00037%3B match to protein family HMM TIGR01971 gene gene5417 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5534 BCG9842_B5535 BCG9842_B5535 nuoJ nuoJ 5167669 5168193 - NADH dehydrogenase (ubiquinone)%2C J subunit identified by match to protein family HMM PF00499 gene gene5416 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5535 BCG9842_B5536 BCG9842_B5536 nuoK nuoK 5167362 5167676 - NADH dehydrogenase (ubiquinone)%2C K subunit identified by match to protein family HMM PF00420 gene gene5415 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5536 BCG9842_B5537 BCG9842_B5537 nuoL nuoL 5165469 5167331 - NADH dehydrogenase (ubiquinone)%2C L subunit identified by match to protein family HMM PF00361%3B match to protein family HMM PF00662%3B match to protein family HMM TIGR01974 gene gene5414 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5537 BCG9842_B5538 BCG9842_B5538 nuoM nuoM 5163970 5165472 - NADH dehydrogenase (ubiquinone)%2C M subunit identified by match to protein family HMM PF00361%3B match to protein family HMM TIGR01972 gene gene5413 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5538 BCG9842_B5539 BCG9842_B5539 nuoN nuoN 5162448 5163968 - NADH dehydrogenase (ubiquinone)%2C N subunit identified by match to protein family HMM PF00361%3B match to protein family HMM TIGR01770 gene gene5412 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5539 BCG9842_B5540 BCG9842_B5540 BCG9842_B5540 5162009 5162245 - conserved hypothetical protein identified by match to protein family HMM PF06612%3B match to protein family HMM TIGR02327 gene gene5411 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5540 BCG9842_B5541 BCG9842_B5541 BCG9842_B5541 5161253 5161957 - conserved hypothetical protein identified by match to protein family HMM PF08680 gene gene5410 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5541 BCG9842_B5542 BCG9842_B5542 murA1 murA1 5159909 5161213 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 identified by match to protein family HMM PF00275%3B match to protein family HMM TIGR01072 gene gene5409 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5542 BCG9842_B5543 BCG9842_B5543 spoIID spoIID 5158680 5159699 - stage II sporulation protein D identified by match to protein family HMM PF08486%3B match to protein family HMM TIGR02669%3B match to protein family HMM TIGR02870 gene gene5408 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5543 BCG9842_B5544 BCG9842_B5544 BCG9842_B5544 5157575 5158582 - ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005%3B match to protein family HMM PF04397 gene gene5407 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5544 BCG9842_B5545 BCG9842_B5545 BCG9842_B5545 5156551 5157393 - ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005 gene gene5406 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5545 BCG9842_B5546 BCG9842_B5546 BCG9842_B5546 5155844 5156551 - ABC-2 type transporter identified by match to protein family HMM PF01061 gene gene5405 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5546 BCG9842_B5547 BCG9842_B5547 BCG9842_B5547 5154776 5155681 - stage II sporulation protein identified by match to protein family HMM PF01551 gene gene5404 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5547 BCG9842_B5548 BCG9842_B5548 BCG9842_B5548 5154500 5154634 - hypothetical protein identified by glimmer%3B putative gene gene5403 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5548 BCG9842_B5549 BCG9842_B5549 spoIIID spoIIID 5153919 5154125 - stage III sporulation protein D gene gene5402 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5549 BCG9842_B5550 BCG9842_B5550 BCG9842_B5550 5152757 5153758 - Rod shape-determining protein MreB identified by match to protein family HMM PF02491%3B match to protein family HMM PF06723%3B match to protein family HMM TIGR00904 gene gene5401 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5550 BCG9842_B5551 BCG9842_B5551 fabZ fabZ 5151893 5152327 - beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ identified by match to protein family HMM PF07977%3B match to protein family HMM TIGR01750 gene gene5400 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5551 BCG9842_B5552 BCG9842_B5552 BCG9842_B5552 5150874 5151551 - tyrosine-protein kinase YwqD identified by match to protein family HMM TIGR01007 gene gene5399 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5552 BCG9842_B5553 BCG9842_B5553 BCG9842_B5553 5149867 5150610 - capsular polysaccharide biosynthesis identified by match to protein family HMM PF02706 gene gene5398 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5553 BCG9842_B5554 BCG9842_B5554 BCG9842_B5554 5149176 5149877 - tyrosine-protein kinase YwqD identified by match to protein family HMM TIGR01007 gene gene5397 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5554 BCG9842_B5555 BCG9842_B5555 BCG9842_B5555 5148296 5149126 - putative tyrosine-protein phosphatase CapC identified by match to protein family HMM PF02811 gene gene5396 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5555 BCG9842_B5556 BCG9842_B5556 galU galU 5147178 5148056 - UTP-glucose-1-phosphate uridylyltransferase identified by match to protein family HMM PF00483%3B match to protein family HMM TIGR01099 gene gene5395 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5556 BCG9842_B5557 BCG9842_B5557 BCG9842_B5557 5146475 5147161 - galactosyl transferase CpsE identified by match to protein family HMM PF02397 gene gene5394 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5557 BCG9842_B5558 BCG9842_B5558 BCG9842_B5558 5144469 5146424 - conserved hypothetical protein identified by match to protein family HMM PF07940 gene gene5393 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5558 BCG9842_B5559 BCG9842_B5559 BCG9842_B5559 5143232 5144461 - glycosyl transferase%2C group 1 family protein identified by match to protein family HMM PF00534 gene gene5392 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5559 BCG9842_B5560 BCG9842_B5560 BCG9842_B5560 5142037 5143200 - conserved hypothetical protein gene gene5391 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5560 BCG9842_B5561 BCG9842_B5561 mviN mviN 5140525 5142003 - integral membrane protein MviN identified by match to protein family HMM PF01943%3B match to protein family HMM PF03023%3B match to protein family HMM TIGR01695 gene gene5390 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5561 BCG9842_B5562 BCG9842_B5562 BCG9842_B5562 5139420 5140490 - glycosyl transferase%2C group 1 family protein identified by match to protein family HMM PF00534 gene gene5389 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5562 BCG9842_B5563 BCG9842_B5563 BCG9842_B5563 5138124 5139407 - NDP-N-acetyl-D-galactosaminuronic acid dehydrogenase identified by match to protein family HMM PF00984%3B match to protein family HMM PF03720%3B match to protein family HMM PF03721%3B match to protein family HMM TIGR03026 gene gene5388 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5563 BCG9842_B5564 BCG9842_B5564 BCG9842_B5564 5137963 5138088 - hypothetical protein identified by glimmer%3B putative gene gene5387 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5564 BCG9842_B5565 BCG9842_B5565 BCG9842_B5565 5137652 5137813 - serine acetyltransferase gene gene5386 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5565 BCG9842_B5566 BCG9842_B5566 BCG9842_B5566 5136643 5137557 - membrane-bound protein LytR identified by match to protein family HMM PF03816%3B match to protein family HMM TIGR00350 gene gene5385 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5566 BCG9842_B5567 BCG9842_B5567 BCG9842_B5567 5135714 5136544 - epsx protein gene gene5384 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5567 BCG9842_B5568 BCG9842_B5568 galE_2 galE_2 5134620 5135633 - UDP-glucose 4-epimerase identified by match to protein family HMM PF00106%3B match to protein family HMM PF01073%3B match to protein family HMM PF01370%3B match to protein family HMM PF02719%3B match to protein family HMM PF04321%3B match to protein family HMM PF07993%3B match to protein family HMM TIGR01179 gene gene5383 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5568 BCG9842_B5569 BCG9842_B5569 BCG9842_B5569 5133835 5134506 - DNA-binding response regulator identified by match to protein family HMM PF00072%3B match to protein family HMM PF00486 gene gene5382 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5569 BCG9842_B5570 BCG9842_B5570 BCG9842_B5570 5132393 5133823 - sensor histidine kinase identified by match to protein family HMM PF00512%3B match to protein family HMM PF00672%3B match to protein family HMM PF02518 gene gene5381 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5570 BCG9842_B5571 BCG9842_B5571 BCG9842_B5571 5131544 5132326 - conserved hypothetical protein gene gene5380 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5571 BCG9842_B5572 BCG9842_B5572 BCG9842_B5572 5130513 5131547 - putative lipoprotein gene gene5379 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5572 BCG9842_B5573 BCG9842_B5573 BCG9842_B5573 5129159 5130493 - phosphoglycerate transporter family protein identified by match to protein family HMM PF07690%3B match to protein family HMM TIGR00881 gene gene5378 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5573 BCG9842_B5574 BCG9842_B5574 BCG9842_B5574 5128537 5129049 + putative membrane protein gene gene5377 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5574 BCG9842_B5575 BCG9842_B5575 BCG9842_B5575 5128345 5128536 + DNA-binding protein identified by match to protein family HMM PF01381 gene gene5376 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5575 BCG9842_B5576 BCG9842_B5576 BCG9842_B5576 5126769 5127962 - efflux transporter%2C RND family%2C MFP subunit identified by match to protein family HMM TIGR01730 gene gene5375 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5576 BCG9842_B5577 BCG9842_B5577 BCG9842_B5577 5126092 5126772 - ABC transporter%2C ATP-binding protein identified by match to protein family HMM PF00005 gene gene5374 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5577 BCG9842_B5578 BCG9842_B5578 BCG9842_B5578 5124893 5126095 - ABC transporter%2C permease identified by match to protein family HMM PF02687 gene gene5373 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5578 BCG9842_B5579 BCG9842_B5579 BCG9842_B5579 5124098 5124778 - conserved hypothetical protein gene gene5372 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5579 BCG9842_B5580 BCG9842_B5580 BCG9842_B5580 5123407 5123877 - putative sigma factor identified by match to protein family HMM PF04542%3B match to protein family HMM PF04545%3B match to protein family HMM TIGR02937 gene gene5371 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5580 BCG9842_B5581 BCG9842_B5581 comK comK 5122876 5123352 + competence transcription factor ComK identified by match to protein family HMM PF06338 gene gene5370 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5581 BCG9842_B5582 BCG9842_B5582 BCG9842_B5582 5122287 5122685 - conserved hypothetical protein gene gene5369 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5582 BCG9842_B5583 BCG9842_B5583 BCG9842_B5583 5122050 5122265 + hypothetical protein identified by glimmer%3B putative gene gene5368 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5583 BCG9842_B5584 BCG9842_B5584 BCG9842_B5584 5121708 5121932 + conserved hypothetical protein identified by match to protein family HMM PF07872 gene gene5367 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5584 BCG9842_B5585 BCG9842_B5585 BCG9842_B5585 5121111 5121596 - conserved domain protein gene gene5366 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5585 BCG9842_B5586 BCG9842_B5586 BCG9842_B5586 5118282 5121038 + putative helicase identified by match to protein family HMM PF00176%3B match to protein family HMM PF00271 gene gene5365 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5586 BCG9842_B5587 BCG9842_B5587 BCG9842_B5587 5116679 5118298 + conserved hypothetical protein identified by match to protein family HMM PF04434 gene gene5364 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5587 BCG9842_B5588 BCG9842_B5588 BCG9842_B5588 5116034 5116522 - conserved domain protein gene gene5363 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5588 BCG9842_B5589 BCG9842_B5589 BCG9842_B5589 5114472 5116028 - putative membrane protein gene gene5362 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5589 BCG9842_B5590 BCG9842_B5590 BCG9842_B5590 5113079 5114458 - conserved hypothetical protein gene gene5361 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5590 BCG9842_B5591 BCG9842_B5591 BCG9842_B5591 5112606 5112908 + hypothetical protein identified by glimmer%3B putative gene gene5360 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5591 BCG9842_B5592 BCG9842_B5592 BCG9842_B5592 5111642 5112520 + conserved domain protein identified by match to protein family HMM PF06347%3B match to protein family HMM PF06725%3B match to protein family HMM PF08239 gene gene5359 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5592 BCG9842_B5593 BCG9842_B5593 opuD2 opuD2 5109463 5110977 - glycine betaine transporter identified by match to protein family HMM PF02028%3B match to protein family HMM TIGR00842 gene gene5358 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5593 BCG9842_B5594 BCG9842_B5594 BCG9842_B5594 5108932 5109066 - hypothetical protein identified by glimmer%3B putative gene gene5357 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5594 BCG9842_B5595 BCG9842_B5595 BCG9842_B5595 5108396 5108788 + N-acetylglucosaminyltransferase gene gene5356 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5595 BCG9842_B5597 BCG9842_B5597 BCG9842_B5597 5106297 5108111 + group II intron-encoded protein LtrA identified by match to protein family HMM PF00078%3B match to protein family HMM PF01348 gene gene5355 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5597 BCG9842_B5598 BCG9842_B5598 BCG9842_B5598 5106178 5106291 + hypothetical protein identified by glimmer%3B putative gene gene5354 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5598 BCG9842_B5599 BCG9842_B5599 BCG9842_B5599 5104959 5105747 + N-acetylglucosaminyltransferase identified by match to protein family HMM PF00535 gene gene5353 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5599 BCG9842_B5600 BCG9842_B5600 BCG9842_B5600 5104207 5104962 + conserved hypothetical protein gene gene5352 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5600 BCG9842_B5601 BCG9842_B5601 BCG9842_B5601 5102734 5103945 + nucleoside transporter%2C NupC family identified by match to protein family HMM PF01773%3B match to protein family HMM PF07662%3B match to protein family HMM PF07670%3B match to protein family HMM TIGR00804 gene gene5351 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5601 BCG9842_B5602 BCG9842_B5602 BCG9842_B5602 5102490 5102618 - hypothetical protein identified by glimmer%3B putative gene gene5350 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5602 BCG9842_B5603 BCG9842_B5603 BCG9842_B5603 5100618 5102366 + putative cell wall hydrolase identified by match to protein family HMM PF00877%3B match to protein family HMM PF06347%3B match to protein family HMM PF08239 gene gene5349 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5603 BCG9842_B5604 BCG9842_B5604 dat2 dat2 5099488 5100408 + D-amino acid aminotransferase identified by match to protein family HMM PF01063%3B match to protein family HMM TIGR01121 gene gene5348 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5604 BCG9842_B5605 BCG9842_B5605 BCG9842_B5605 5099243 5099368 + conserved hypothetical protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift gene gene5347 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5605 BCG9842_B5606 BCG9842_B5606 BCG9842_B5606 5097049 5098977 + sulfatase identified by match to protein family HMM PF00884 gene gene5346 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5606 BCG9842_B5607 BCG9842_B5607 BCG9842_B5607 5096139 5096504 - conserved hypothetical protein identified by match to protein family HMM PF06803 gene gene5345 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5607 BCG9842_B5608 BCG9842_B5608 BCG9842_B5608 5095597 5096088 - conserved hypothetical protein gene gene5344 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5608 BCG9842_B5609 BCG9842_B5609 BCG9842_B5609 5095210 5095527 + conserved hypothetical protein gene gene5343 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5609 BCG9842_B5610 BCG9842_B5610 lldP2 lldP2 5093251 5094912 - L-lactate permease identified by match to protein family HMM PF02652%3B match to protein family HMM TIGR00795 gene gene5342 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5610 BCG9842_B5612 BCG9842_B5612 thiC thiC 5091191 5092951 - thiamine biosynthesis protein ThiC identified by match to protein family HMM PF01964%3B match to protein family HMM TIGR00190 gene gene5341 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5612 BCG9842_B5613 BCG9842_B5613 BCG9842_B5613 5089577 5090935 + putative arsenical pump family protein identified by match to protein family HMM PF02040%3B match to protein family HMM PF03600 gene gene5340 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5613 BCG9842_B5614 BCG9842_B5614 BCG9842_B5614 5088240 5089265 + putative cytochrome d ubiquinol oxidase%2C subunit II gene gene5339 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5614 BCG9842_B5615 BCG9842_B5615 cydA3 cydA3 5086892 5088247 + cytochrome d ubiquinol oxidase%2C subunit I identified by match to protein family HMM PF01654 gene gene5338 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5615 BCG9842_B5616 BCG9842_B5616 BCG9842_B5616 5086490 5086639 - conserved hypothetical protein gene gene5337 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5616 BCG9842_B5617 BCG9842_B5617 BCG9842_B5617 5085313 5086398 - conserved hypothetical protein gene gene5336 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5617 BCG9842_B5618 BCG9842_B5618 BCG9842_B5618 5084381 5085283 + transcriptional regulator%2C LysR family identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466 gene gene5335 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5618 BCG9842_B5619 BCG9842_B5619 BCG9842_B5619 5082245 5084245 - conserved hypothetical protein identified by match to protein family HMM TIGR03061%3B match to protein family HMM TIGR03062 gene gene5334 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5619 BCG9842_B5620 BCG9842_B5620 BCG9842_B5620 5081824 5082204 + conserved hypothetical protein identified by match to protein family HMM PF00903 gene gene5333 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5620 BCG9842_B5621 BCG9842_B5621 BCG9842_B5621 5080627 5081784 + putative membrane protein gene gene5332 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5621 BCG9842_B5622 BCG9842_B5622 BCG9842_B5622 5079245 5080462 + putative proton/glutamate symporter family protein identified by match to protein family HMM PF00375 gene gene5331 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5622 BCG9842_B5623 BCG9842_B5623 celA3 celA3 5078720 5079022 - PTS system%2C cellobiose-specific IIB component identified by match to protein family HMM PF02302%3B match to protein family HMM TIGR00853 gene gene5330 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5623 BCG9842_B5624 BCG9842_B5624 celB3 celB3 5077404 5078705 - PTS system%2C cellobiose-specific IIC component identified by match to protein family HMM PF02378%3B match to protein family HMM TIGR00359%3B match to protein family HMM TIGR00410 gene gene5329 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5624 BCG9842_B5625 BCG9842_B5625 celC3 celC3 5077077 5077394 - PTS system%2C cellobiose-specific IIA component identified by match to protein family HMM PF02255 gene gene5328 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5625 BCG9842_B5626 BCG9842_B5626 speD2 speD2 5076443 5076814 + adenosylmethionine decarboxylase 2 identified by match to protein family HMM PF02675%3B match to protein family HMM TIGR03330 gene gene5327 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5626 BCG9842_B5627 BCG9842_B5627 BCG9842_B5627 5075334 5076416 + spermine/spermidine synthase family protein identified by match to protein family HMM PF01564 gene gene5326 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5627 BCG9842_B5628 BCG9842_B5628 celA2 celA2 5074632 5074934 - PTS system%2C cellobiose-specific IIB component identified by match to protein family HMM PF02302 gene gene5325 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5628 BCG9842_B5629 BCG9842_B5629 celB2 celB2 5073311 5074615 - PTS system%2C cellobiose-specific IIC component identified by match to protein family HMM PF02378%3B match to protein family HMM TIGR00359%3B match to protein family HMM TIGR00410 gene gene5324 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5629 BCG9842_B5630 BCG9842_B5630 celC2 celC2 5072805 5073128 - PTS system%2C cellobiose-specific IIA component identified by match to protein family HMM PF02255 gene gene5323 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5630 BCG9842_B5631 BCG9842_B5631 celF celF 5071476 5072801 - 6-phospho-beta-glucosidase identified by match to protein family HMM PF02056 gene gene5322 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5631 BCG9842_B5632 BCG9842_B5632 BCG9842_B5632 5070569 5071273 - conserved hypothetical protein identified by match to protein family HMM PF04794 gene gene5321 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5632 BCG9842_B5633 BCG9842_B5633 BCG9842_B5633 5069349 5070530 + chromate ion transporter identified by match to protein family HMM PF02417%3B match to protein family HMM TIGR00937 gene gene5320 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5633 BCG9842_B5634 BCG9842_B5634 BCG9842_B5634 5068748 5069161 - conserved hypothetical protein identified by match to protein family HMM PF07452 gene gene5319 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5634 BCG9842_B5635 BCG9842_B5635 BCG9842_B5635 5065927 5068602 + transcription antiterminator%2C BglG family identified by match to protein family HMM PF00158%3B match to protein family HMM PF00874%3B match to protein family HMM PF03610%3B match to protein family HMM PF07728 gene gene5318 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5635 BCG9842_B5636 BCG9842_B5636 BCG9842_B5636 5065085 5065822 + putative polysaccharide deacetylase identified by match to protein family HMM PF01522 gene gene5317 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5636 BCG9842_B5637 BCG9842_B5637 BCG9842_B5637 5063811 5064884 + glycosyl transferase%2C group 4 family protein identified by match to protein family HMM PF00953 gene gene5316 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5637 BCG9842_B5638 BCG9842_B5638 ugd ugd 5061948 5063273 - UDP-glucose 6-dehydrogenase identified by match to protein family HMM PF00984%3B match to protein family HMM PF01210%3B match to protein family HMM PF02558%3B match to protein family HMM PF03720%3B match to protein family HMM PF03721%3B match to protein family HMM TIGR03026 gene gene5315 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5638 BCG9842_B5639 BCG9842_B5639 BCG9842_B5639 5060758 5061873 - UDP-N-acetylglucosamine 2-epimerase identified by match to protein family HMM PF02350%3B match to protein family HMM TIGR00236 gene gene5314 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5639 BCG9842_B5640 BCG9842_B5640 BCG9842_B5640 5059602 5060720 + transcription antiterminator%2C LytR family identified by match to protein family HMM PF03816%3B match to protein family HMM TIGR00350 gene gene5313 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5640 BCG9842_B5641 BCG9842_B5641 BCG9842_B5641 5058884 5059519 + conserved hypothetical protein TIGR00257 identified by match to protein family HMM PF01205%3B match to protein family HMM PF09186%3B match to protein family HMM TIGR00257 gene gene5312 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5641 BCG9842_B5642 BCG9842_B5642 BCG9842_B5642 5057805 5058647 - degV family protein identified by match to protein family HMM PF02645%3B match to protein family HMM TIGR00762 gene gene5311 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5642 BCG9842_B5643 BCG9842_B5643 BCG9842_B5643 5057318 5057632 - conserved hypothetical protein identified by match to protein family HMM PF01638 gene gene5310 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5643 BCG9842_B5644 BCG9842_B5644 BCG9842_B5644 5055739 5057169 - putative cell wall endopeptidase%2C NlpC/P60 family identified by match to protein family HMM PF00877 gene gene5309 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5644 BCG9842_B5645 BCG9842_B5645 comFA comFA 5054262 5055386 - comF operon protein 1 identified by match to protein family HMM PF00270%3B match to protein family HMM PF00271 gene gene5308 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5645 BCG9842_B5646 BCG9842_B5646 comFC comFC 5053558 5054130 - comF operon protein 3 gene gene5307 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5646 BCG9842_B5647 BCG9842_B5647 cspC cspC 5053234 5053431 - cold shock protein CspC identified by match to protein family HMM PF00313 gene gene5306 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5647 BCG9842_B5648 BCG9842_B5648 BCG9842_B5648 5052937 5053071 + conserved hypothetical protein gene gene5305 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5648 BCG9842_B5649 BCG9842_B5649 yfiA yfiA 5052370 5052912 - ribosomal subunit interface protein identified by match to protein family HMM PF02482%3B match to protein family HMM TIGR00741 gene gene5304 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5649 BCG9842_B5650 BCG9842_B5650 secA2 secA2 5049590 5052097 - preprotein translocase%2C SecA subunit identified by match to protein family HMM PF00271%3B match to protein family HMM PF01043%3B match to protein family HMM PF02810%3B match to protein family HMM PF07516%3B match to protein family HMM PF07517%3B match to protein family HMM TIGR00963 gene gene5303 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5650 BCG9842_B5651 BCG9842_B5651 prfB prfB 5048347 5049490 - peptide chain release factor 2%2C programmed frameshift identified by similarity to SP:P28367%3B match to protein family HMM PF00472%3B match to protein family HMM PF03462%3B match to protein family HMM TIGR00020 gene gene5302 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5651 BCG9842_B5653 BCG9842_B5653 cccB cccB 5047584 5047907 - cytochrome c-551 gene gene5301 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5653 BCG9842_B5654 BCG9842_B5654 ftsE ftsE 5046613 5047257 - cell division ABC transporter%2C ATP-binding protein FtsE identified by match to protein family HMM PF00005 gene gene5300 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5654 BCG9842_B5655 BCG9842_B5655 ftsX ftsX 5045730 5046557 - cell division ABC transporter%2C permease protein FtsX identified by match to protein family HMM PF02687 gene gene5299 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5655 BCG9842_B5656 BCG9842_B5656 BCG9842_B5656 5044175 5045611 - carboxyl-terminal protease identified by match to protein family HMM PF00595%3B match to protein family HMM PF01471%3B match to protein family HMM PF03572%3B match to protein family HMM TIGR00225 gene gene5298 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5656 BCG9842_B5657 BCG9842_B5657 BCG9842_B5657 5042881 5043960 - putative membrane protein gene gene5297 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5657 BCG9842_B5658 BCG9842_B5658 BCG9842_B5658 5040940 5042655 - ABC transporter%2C permease/ATP-binding protein identified by match to protein family HMM PF00005%3B match to protein family HMM PF00664 gene gene5296 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5658 BCG9842_B5659 BCG9842_B5659 BCG9842_B5659 5040713 5040874 - conserved hypothetical protein an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF01906 gene gene5295 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5659 BCG9842_B5660 BCG9842_B5660 BCG9842_B5660 5040564 5040692 - protein _4859 an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift gene gene5294 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5660 BCG9842_B5661 BCG9842_B5661 BCG9842_B5661 5040088 5040447 + pristinamycin resistance protein VgaB gene gene5293 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5661 BCG9842_B5662 BCG9842_B5662 BCG9842_B5662 5039540 5040085 + FMN reductase%2C NADPH-dependent identified by match to protein family HMM PF02525%3B match to protein family HMM PF03358 gene gene5292 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5662 BCG9842_B5663 BCG9842_B5663 BCG9842_B5663 5039167 5039535 + transcriptional regulator%2C MerR family identified by match to protein family HMM PF00376 gene gene5291 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5663 BCG9842_B5664 BCG9842_B5664 BCG9842_B5664 5038222 5039115 + transcriptional regulator%2C LysR family identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466 gene gene5290 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5664 BCG9842_B5665 BCG9842_B5665 BCG9842_B5665 5037048 5038070 - putative membrane protein identified by match to protein family HMM PF03601 gene gene5289 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5665 BCG9842_B5666 BCG9842_B5666 BCG9842_B5666 5036615 5036812 - DNA-binding protein identified by match to protein family HMM PF01381 gene gene5288 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5666 BCG9842_B5667 BCG9842_B5667 BCG9842_B5667 5036241 5036468 - conserved hypothetical protein gene gene5287 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5667 BCG9842_B5668 BCG9842_B5668 BCG9842_B5668 5035380 5036141 - transcriptional regulator%2C MerR family identified by match to protein family HMM PF00376 gene gene5286 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5668 BCG9842_B5669 BCG9842_B5669 BCG9842_B5669 5034763 5035383 - conserved hypothetical protein gene gene5285 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5669 BCG9842_B5670 BCG9842_B5670 BCG9842_B5670 5034269 5034544 - putative lipoprotein gene gene5284 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5670 BCG9842_B5671 BCG9842_B5671 uvrB uvrB 5032141 5034117 - excinuclease ABC%2C B subunit identified by match to protein family HMM PF00271%3B match to protein family HMM PF02151%3B match to protein family HMM PF04851%3B match to protein family HMM TIGR00631 gene gene5283 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5671 BCG9842_B5672 BCG9842_B5672 uvrA uvrA 5029259 5032135 - excinuclease ABC%2C A subunit identified by match to protein family HMM PF00005%3B match to protein family HMM TIGR00630 gene gene5282 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5672 BCG9842_B5673 BCG9842_B5673 BCG9842_B5673 5028748 5029200 - hypothetical protein identified by glimmer%3B putative gene gene5281 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5673 BCG9842_B5674 BCG9842_B5674 BCG9842_B5674 5028256 5028636 - putative membrane protein identified by match to protein family HMM PF04020 gene gene5280 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5674 BCG9842_B5675 BCG9842_B5675 hprK hprK 5027170 5028099 - HPr(Ser) kinase/phosphatase identified by match to protein family HMM PF02603%3B match to protein family HMM PF07475%3B match to protein family HMM TIGR00679 gene gene5279 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5675 BCG9842_B5676 BCG9842_B5676 lgT lgT 5026333 5027145 - prolipoprotein diacylglyceryl transferase identified by match to protein family HMM PF01790%3B match to protein family HMM TIGR00544 gene gene5278 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5676 BCG9842_B5677 BCG9842_B5677 BCG9842_B5677 5025615 5026265 - hydrolase%2C haloacid dehalogenase-like family identified by match to protein family HMM PF00702%3B match to protein family HMM TIGR01509%3B match to protein family HMM TIGR01549 gene gene5277 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5677 BCG9842_B5678 BCG9842_B5678 BCG9842_B5678 5025069 5025581 - bacterial transferase hexapeptide domain protein identified by match to protein family HMM PF00132 gene gene5276 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5678 BCG9842_B5679 BCG9842_B5679 BCG9842_B5679 5023418 5024929 - TPR domain protein identified by match to protein family HMM PF00515%3B match to protein family HMM PF07719 gene gene5275 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5679 BCG9842_B5680 BCG9842_B5680 trxB trxB 5022376 5023332 - thioredoxin-disulfide reductase identified by match to protein family HMM PF00070%3B match to protein family HMM PF01134%3B match to protein family HMM PF07992%3B match to protein family HMM TIGR01292 gene gene5274 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5680 BCG9842_B5681 BCG9842_B5681 BCG9842_B5681 5021404 5022210 - conserved hypothetical protein identified by match to protein family HMM PF04018 gene gene5273 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5681 BCG9842_B5682 BCG9842_B5682 BCG9842_B5682 5020716 5021174 - mutT/nudix family protein identified by match to protein family HMM PF00293 gene gene5272 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5682 BCG9842_B5683 BCG9842_B5683 BCG9842_B5683 5019814 5020695 - conserved hypothetical protein identified by match to protein family HMM PF03668 gene gene5271 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5683 BCG9842_B5684 BCG9842_B5684 BCG9842_B5684 5018857 5019810 - conserved hypothetical protein identified by match to protein family HMM PF01933%3B match to protein family HMM TIGR01826 gene gene5270 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5684 BCG9842_B5685 BCG9842_B5685 BCG9842_B5685 5017818 5018768 - conserved hypothetical protein identified by match to protein family HMM PF02650%3B match to protein family HMM TIGR00647 gene gene5269 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5685 BCG9842_B5686 BCG9842_B5686 ptsH2 ptsH2 5017546 5017794 - phosphocarrier protein HPr identified by match to protein family HMM PF00381%3B match to protein family HMM TIGR01003 gene gene5268 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5686 BCG9842_B5687 BCG9842_B5687 clpP2 clpP2 5016441 5017022 + ATP-dependent Clp protease%2C proteolytic subunit ClpP identified by match to protein family HMM PF00574%3B match to protein family HMM TIGR00493 gene gene5267 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5687 BCG9842_B5688 BCG9842_B5688 BCG9842_B5688 5015330 5016199 + conserved hypothetical protein identified by match to protein family HMM PF04239%3B match to protein family HMM PF07870 gene gene5266 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5688 BCG9842_B5689 BCG9842_B5689 BCG9842_B5689 5015103 5015309 + conserved hypothetical protein identified by match to protein family HMM PF07870 gene gene5265 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5689 BCG9842_B5690 BCG9842_B5690 BCG9842_B5690 5014741 5015091 + SpoVA family protein identified by match to protein family HMM PF03862%3B match to protein family HMM TIGR02839 gene gene5264 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5690 BCG9842_B5691 BCG9842_B5691 BCG9842_B5691 5013728 5014744 + stage V sporulation protein AD identified by match to protein family HMM PF07451%3B match to protein family HMM TIGR02845 gene gene5263 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5691 BCG9842_B5692 BCG9842_B5692 BCG9842_B5692 5013251 5013727 + SpoVA family protein identified by match to protein family HMM PF03862%3B match to protein family HMM TIGR02838 gene gene5262 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5692 BCG9842_B5693 BCG9842_B5693 BCG9842_B5693 5012736 5013221 + putative lipoprotein gene gene5261 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5693 BCG9842_B5694 BCG9842_B5694 BCG9842_B5694 5012436 5012642 + conserved hypothetical protein identified by match to protein family HMM PF07870 gene gene5260 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5694 BCG9842_B5695 BCG9842_B5695 BCG9842_B5695 5012152 5012232 - tRNA-Arg tRNA gene5259 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5695 BCG9842_B5696 BCG9842_B5696 sigL sigL 5010589 5011896 - RNA polymerase sigma-54 factor identified by match to protein family HMM PF00309%3B match to protein family HMM PF04552%3B match to protein family HMM PF04963%3B match to protein family HMM TIGR02395 gene gene5258 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5696 BCG9842_B5697 BCG9842_B5697 BCG9842_B5697 5010334 5010579 - glutaredoxin family protein identified by match to protein family HMM PF00462%3B match to protein family HMM PF05768 gene gene5257 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5697 BCG9842_B5698 BCG9842_B5698 cggR cggR 5009169 5010197 - gapA transcriptional regulator CggR identified by match to protein family HMM PF04198 gene gene5256 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5698 BCG9842_B5699 BCG9842_B5699 gap2 gap2 5008138 5009142 - glyceraldehyde-3-phosphate dehydrogenase%2C type I identified by match to protein family HMM PF00044%3B match to protein family HMM PF02800%3B match to protein family HMM TIGR01534 gene gene5255 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5699 BCG9842_B5700 BCG9842_B5700 pgk pgk 5006814 5007998 - phosphoglycerate kinase identified by match to protein family HMM PF00162 gene gene5254 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5700 BCG9842_B5701 BCG9842_B5701 tpi tpi 5006026 5006781 - triosephosphate isomerase identified by match to protein family HMM PF00121%3B match to protein family HMM TIGR00419 gene gene5253 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5701 BCG9842_B5702 BCG9842_B5702 gpmI gpmI 5004500 5006029 - phosphoglycerate mutase%2C 2%2C3-bisphosphoglycerate-independent identified by match to protein family HMM PF01676%3B match to protein family HMM PF06415%3B match to protein family HMM TIGR01307 gene gene5252 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5702 BCG9842_B5703 BCG9842_B5703 eno eno 5003174 5004469 - enolase identified by match to protein family HMM PF00113%3B match to protein family HMM PF03952%3B match to protein family HMM TIGR01060 gene gene5251 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5703 BCG9842_B5704 BCG9842_B5704 BCG9842_B5704 5002173 5003123 + inosine-uridine preferring nucleoside hydrolase family protein identified by match to protein family HMM PF01156 gene gene5250 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5704 BCG9842_B5705 BCG9842_B5705 BCG9842_B5705 5001452 5001826 - LrgA family protein identified by match to protein family HMM PF03788 gene gene5249 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5705 BCG9842_B5706 BCG9842_B5706 BCG9842_B5706 5000763 5001455 - conserved hypothetical protein identified by match to protein family HMM PF04172 gene gene5248 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5706 BCG9842_B5707 BCG9842_B5707 secG secG 5000435 5000668 - preprotein translocase%2C SecG subunit identified by match to protein family HMM PF03840%3B match to protein family HMM TIGR00810 gene gene5247 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5707 BCG9842_B5708 BCG9842_B5708 estA estA 4999534 5000277 - carboxylesterase gene gene5246 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5708 BCG9842_B5709 BCG9842_B5709 vacB vacB 4996953 4999391 - ribonuclease R identified by match to protein family HMM PF00575%3B match to protein family HMM PF00773%3B match to protein family HMM PF08206%3B match to protein family HMM TIGR00358%3B match to protein family HMM TIGR02063 gene gene5245 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5709 BCG9842_B5712 BCG9842_B5712 BCG9842_B5712 1179833 1179924 + Small nucleolar RNA snR69 homolog ncRNA gene1215 http://www.ncbi.nlm.nih.gov/gene/?term=BCG9842_B5712