locus-tag class description F3L01_00005 PF08299 Bacterial dnaA protein helix-turn-helix F3L01_00005 PF11638 DnaA N-terminal domain F3L01_00005 PF00308 Bacterial dnaA protein F3L01_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain F3L01_00010 PF02767 DNA polymerase III beta subunit, central domain F3L01_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain F3L01_00020 PF02463 RecF/RecN/SMC N terminal domain F3L01_00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3L01_00025 PF00986 DNA gyrase B subunit, carboxyl terminus F3L01_00025 PF00204 DNA gyrase B F3L01_00025 PF01751 Toprim domain F3L01_00030 PF00521 DNA gyrase/topoisomerase IV, subunit A F3L01_00030 PF03989 DNA gyrase C-terminal domain, beta-propeller F3L01_00060 PF14175 YaaC-like Protein F3L01_00065 PF00571 CBS domain F3L01_00065 PF00478 IMP dehydrogenase / GMP reductase domain F3L01_00070 PF07943 Penicillin-binding protein 5, C-terminal domain F3L01_00070 PF00768 D-alanyl-D-alanine carboxypeptidase F3L01_00075 PF01680 SOR/SNZ family F3L01_00080 PF01174 SNO glutamine amidotransferase family F3L01_00085 PF02403 Seryl-tRNA synthetase N-terminal domain F3L01_00085 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) F3L01_00100 PF01712 Deoxynucleoside kinase F3L01_00105 PF01712 Deoxynucleoside kinase F3L01_00110 PF00857 Isochorismatase family F3L01_00120 PF14437 MafB19-like deaminase F3L01_00130 PF12169 DNA polymerase III subunits gamma and tau domain III F3L01_00135 PF02575 YbaB/EbfC DNA-binding family F3L01_00140 PF02132 RecR protein F3L01_00140 PF13662 Toprim domain F3L01_00145 PF10704 Protein of unknown function (DUF2508) F3L01_00150 PF07441 SigmaK-factor processing regulatory protein BofA F3L01_00185 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain F3L01_00185 PF01276 Orn/Lys/Arg decarboxylase, major domain F3L01_00190 PF02223 Thymidylate kinase F3L01_00195 PF09115 DNA polymerase III, delta subunit, C terminal F3L01_00200 PF04468 PSP1 C-terminal conserved region F3L01_00205 PF06156 Initiation control protein YabA F3L01_00210 PF05175 Methyltransferase small domain F3L01_00215 PF01541 GIY-YIG catalytic domain F3L01_00220 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases F3L01_00225 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin F3L01_00225 PF18277 AbrB C-terminal domain F3L01_00230 PF01588 Putative tRNA binding domain F3L01_00230 PF09334 tRNA synthetases class I (M) F3L01_00230 PF08264 Anticodon-binding domain of tRNA F3L01_00235 PF01026 TatD related DNase F3L01_00240 PF13331 Domain of unknown function (DUF4093) F3L01_00240 PF13662 Toprim domain F3L01_00245 PF00398 Ribosomal RNA adenine dimethylase F3L01_00250 PF05582 YabG peptidase U57 F3L01_00255 PF06257 Biofilm formation stimulator VEG F3L01_00260 PF00269 Small, acid-soluble spore proteins, alpha/beta type F3L01_00265 PF00288 GHMP kinases N terminal domain F3L01_00265 PF08544 GHMP kinases C terminal F3L01_00270 PF09182 Bacterial purine repressor, N-terminal F3L01_00270 PF00156 Phosphoribosyl transferase domain F3L01_00275 PF01042 Endoribonuclease L-PSP F3L01_00280 PF04026 SpoVG F3L01_00285 PF00483 Nucleotidyl transferase F3L01_00285 PF00132 Bacterial transferase hexapeptide (six repeats) F3L01_00290 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase F3L01_00290 PF14572 Phosphoribosyl synthetase-associated domain F3L01_00295 PF01195 Peptidyl-tRNA hydrolase F3L01_00305 PF17757 UvrB interaction domain F3L01_00305 PF00271 Helicase conserved C-terminal domain F3L01_00305 PF00270 DEAD/DEAH box helicase F3L01_00305 PF02559 CarD-like/TRCF domain F3L01_00305 PF03461 TRCF domain F3L01_00310 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin F3L01_00310 PF15714 Stage V sporulation protein T C-terminal, transcription factor F3L01_00315 PF14667 Polysaccharide biosynthesis C-terminal domain F3L01_00315 PF01943 Polysaccharide biosynthesis protein F3L01_00320 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases F3L01_00320 PF03819 MazG nucleotide pyrophosphohydrolase domain F3L01_00325 PF01479 S4 domain F3L01_00330 PF07873 YabP family F3L01_00335 PF09578 Spore cortex protein YabQ (Spore_YabQ) F3L01_00345 PF00575 S1 RNA binding domain F3L01_00360 PF07228 Stage II sporulation protein E (SpoIIE) F3L01_00365 PF09179 TilS substrate binding domain F3L01_00365 PF01171 PP-loop family F3L01_00365 PF11734 TilS substrate C-terminal domain F3L01_00375 PF00004 ATPase family associated with various cellular activities (AAA) F3L01_00375 PF17862 AAA+ lid domain F3L01_00375 PF06480 FtsH Extracellular F3L01_00375 PF01434 Peptidase family M41 F3L01_00380 PF03309 Type III pantothenate kinase F3L01_00385 PF01430 Hsp33 protein F3L01_00390 PF00291 Pyridoxal-phosphate dependent enzyme F3L01_00395 PF04715 Anthranilate synthase component I, N terminal region F3L01_00395 PF00425 chorismate binding enzyme F3L01_00400 PF00117 Glutamine amidotransferase class-I F3L01_00405 PF01063 Amino-transferase class IV F3L01_00410 PF00809 Pterin binding enzyme F3L01_00415 PF02152 Dihydroneopterin aldolase F3L01_00420 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) F3L01_00425 PF01381 Helix-turn-helix F3L01_00430 PF01207 Dihydrouridine synthase (Dus) F3L01_00435 PF00152 tRNA synthetases class II (D, K and N) F3L01_00435 PF01336 OB-fold nucleic acid binding domain F3L01_00515 PF17727 CtsR C-terminal dimerization domain F3L01_00515 PF05848 CtsR N-terminal HTH domain F3L01_00520 PF02151 UvrB/uvrC motif F3L01_00525 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain F3L01_00530 PF17871 AAA lid domain F3L01_00530 PF07724 AAA domain (Cdc48 subfamily) F3L01_00530 PF00004 ATPase family associated with various cellular activities (AAA) F3L01_00530 PF10431 C-terminal, D2-small domain, of ClpB protein F3L01_00530 PF02861 Clp amino terminal domain, pathogenicity island component F3L01_00535 PF18073 Rubredoxin metal binding domain F3L01_00540 PF10635 DisA bacterial checkpoint controller linker region F3L01_00540 PF02457 DisA bacterial checkpoint controller nucleotide-binding F3L01_00550 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase F3L01_00555 PF02542 YgbB family F3L01_00560 PF00749 tRNA synthetases class I (E and Q), catalytic domain F3L01_00565 PF00132 Bacterial transferase hexapeptide (six repeats) F3L01_00565 PF06426 Serine acetyltransferase, N-terminal F3L01_00570 PF01406 tRNA synthetases class I (C) catalytic domain F3L01_00570 PF09190 DALR domain F3L01_00575 PF00636 Ribonuclease III domain F3L01_00580 PF08032 RNA 2'-O ribose methyltransferase substrate binding F3L01_00580 PF00588 SpoU rRNA Methylase family F3L01_00585 PF05991 YacP-like NYN domain F3L01_00590 PF08281 Sigma-70, region 4 F3L01_00590 PF04542 Sigma-70 region 2 F3L01_00595 PF00471 Ribosomal protein L33 F3L01_00600 PF00584 SecE/Sec61-gamma subunits of protein translocation complex F3L01_00605 PF00467 KOW motif F3L01_00605 PF02357 Transcription termination factor nusG F3L01_00610 PF00298 Ribosomal protein L11, RNA binding domain F3L01_00610 PF03946 Ribosomal protein L11, N-terminal domain F3L01_00615 PF00687 Ribosomal protein L1p/L10e family F3L01_00620 PF00466 Ribosomal protein L10 F3L01_00625 PF00542 Ribosomal protein L7/L12 C-terminal domain F3L01_00625 PF16320 Ribosomal protein L7/L12 dimerisation domain F3L01_00630 PF05175 Methyltransferase small domain F3L01_00635 PF04563 RNA polymerase beta subunit F3L01_00635 PF00562 RNA polymerase Rpb2, domain 6 F3L01_00635 PF04561 RNA polymerase Rpb2, domain 2 F3L01_00635 PF04565 RNA polymerase Rpb2, domain 3 F3L01_00635 PF10385 RNA polymerase beta subunit external 1 domain F3L01_00635 PF04560 RNA polymerase Rpb2, domain 7 F3L01_00640 PF04997 RNA polymerase Rpb1, domain 1 F3L01_00640 PF00623 RNA polymerase Rpb1, domain 2 F3L01_00640 PF05000 RNA polymerase Rpb1, domain 4 F3L01_00640 PF04983 RNA polymerase Rpb1, domain 3 F3L01_00640 PF04998 RNA polymerase Rpb1, domain 5 F3L01_00645 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family F3L01_00650 PF00164 Ribosomal protein S12/S23 F3L01_00655 PF00177 Ribosomal protein S7p/S5e F3L01_00660 PF00679 Elongation factor G C-terminus F3L01_00660 PF14492 Elongation Factor G, domain II F3L01_00660 PF03764 Elongation factor G, domain IV F3L01_00660 PF00009 Elongation factor Tu GTP binding domain F3L01_00660 PF03144 Elongation factor Tu domain 2 F3L01_00665 PF03144 Elongation factor Tu domain 2 F3L01_00665 PF03143 Elongation factor Tu C-terminal domain F3L01_00665 PF00009 Elongation factor Tu GTP binding domain F3L01_00675 PF00338 Ribosomal protein S10p/S20e F3L01_00680 PF00297 Ribosomal protein L3 F3L01_00685 PF00573 Ribosomal protein L4/L1 family F3L01_00690 PF00276 Ribosomal protein L23 F3L01_00695 PF03947 Ribosomal Proteins L2, C-terminal domain F3L01_00695 PF00181 Ribosomal Proteins L2, RNA binding domain F3L01_00700 PF00203 Ribosomal protein S19 F3L01_00705 PF00237 Ribosomal protein L22p/L17e F3L01_00710 PF00189 Ribosomal protein S3, C-terminal domain F3L01_00710 PF07650 KH domain F3L01_00715 PF00252 Ribosomal protein L16p/L10e F3L01_00720 PF00831 Ribosomal L29 protein F3L01_00725 PF00366 Ribosomal protein S17 F3L01_00730 PF00238 Ribosomal protein L14p/L23e F3L01_00735 PF00467 KOW motif F3L01_00735 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 F3L01_00740 PF00673 ribosomal L5P family C-terminus F3L01_00740 PF00281 Ribosomal protein L5 F3L01_00745 PF00253 Ribosomal protein S14p/S29e F3L01_00750 PF00410 Ribosomal protein S8 F3L01_00755 PF00347 Ribosomal protein L6 F3L01_00760 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast F3L01_00765 PF03719 Ribosomal protein S5, C-terminal domain F3L01_00765 PF00333 Ribosomal protein S5, N-terminal domain F3L01_00770 PF00327 Ribosomal protein L30p/L7e F3L01_00775 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A F3L01_00780 PF00344 SecY translocase F3L01_00785 PF05191 Adenylate kinase, active site lid F3L01_00790 PF00557 Metallopeptidase family M24 F3L01_00795 PF01176 Translation initiation factor 1A / IF-1 F3L01_00800 PF00444 Ribosomal protein L36 F3L01_00805 PF00416 Ribosomal protein S13/S18 F3L01_00810 PF00411 Ribosomal protein S11 F3L01_00815 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain F3L01_00815 PF01000 RNA polymerase Rpb3/RpoA insert domain F3L01_00815 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain F3L01_00820 PF01196 Ribosomal protein L17 F3L01_00825 PF00005 ABC transporter F3L01_00830 PF00005 ABC transporter F3L01_00835 PF02361 Cobalt transport protein F3L01_00840 PF01416 tRNA pseudouridine synthase F3L01_00845 PF00572 Ribosomal protein L13 F3L01_00850 PF00380 Ribosomal protein S9/S16 F3L01_00860 PF01520 N-acetylmuramoyl-L-alanine amidase F3L01_00865 PF10609 NUBPL iron-transfer P-loop NTPase F3L01_00870 PF17898 Spore germination GerD central core domain F3L01_00875 PF14089 KinB-signalling pathway activation in sporulation F3L01_00880 PF01522 Polysaccharide deacetylase F3L01_00955 PF00491 Arginase family F3L01_00960 PF02457 DisA bacterial checkpoint controller nucleotide-binding F3L01_00965 PF07949 YbbR-like protein F3L01_00970 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II F3L01_00970 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III F3L01_00970 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain F3L01_00970 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I F3L01_00980 PF01380 SIS domain F3L01_00990 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region F3L01_00990 PF00326 Prolyl oligopeptidase family F3L01_01010 PF00528 Binding-protein-dependent transport system inner membrane component F3L01_01015 PF00005 ABC transporter F3L01_01015 PF09383 NIL domain F3L01_01020 PF03180 NLPA lipoprotein F3L01_01025 PF08240 Alcohol dehydrogenase GroES-like domain F3L01_01025 PF00107 Zinc-binding dehydrogenase F3L01_01035 PF01565 FAD binding domain F3L01_01040 PF07690 Major Facilitator Superfamily F3L01_01050 PF07690 Major Facilitator Superfamily F3L01_01070 PF00528 Binding-protein-dependent transport system inner membrane component F3L01_01075 PF00528 Binding-protein-dependent transport system inner membrane component F3L01_01075 PF12911 N-terminal TM domain of oligopeptide transport permease C F3L01_01080 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F3L01_01080 PF00005 ABC transporter F3L01_01085 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F3L01_01085 PF00005 ABC transporter F3L01_01090 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F3L01_01100 PF12833 Helix-turn-helix domain F3L01_01115 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F3L01_01120 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F3L01_01125 PF00248 Aldo/keto reductase family F3L01_01130 PF03807 NADP oxidoreductase coenzyme F420-dependent F3L01_01130 PF14748 Pyrroline-5-carboxylate reductase dimerisation F3L01_01135 PF06800 Sugar transport protein F3L01_01140 PF00528 Binding-protein-dependent transport system inner membrane component F3L01_01150 PF12728 Helix-turn-helix domain F3L01_01150 PF12727 PBP superfamily domain F3L01_01165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3L01_01165 PF03466 LysR substrate binding domain F3L01_01170 PF00892 EamA-like transporter family F3L01_01175 PF14142 YrzO-like protein F3L01_01185 PF01553 Acyltransferase F3L01_01195 PF00356 Bacterial regulatory proteins, lacI family F3L01_01195 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family F3L01_01205 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) F3L01_01205 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 F3L01_01240 PF12848 ABC transporter F3L01_01240 PF00005 ABC transporter F3L01_01240 PF16326 ABC transporter C-terminal domain F3L01_01255 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F3L01_01260 PF00528 Binding-protein-dependent transport system inner membrane component F3L01_01270 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F3L01_01270 PF00005 ABC transporter F3L01_01275 PF00005 ABC transporter F3L01_01275 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F3L01_01305 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily F3L01_01310 PF01557 Fumarylacetoacetate (FAA) hydrolase family F3L01_01320 PF13520 Amino acid permease F3L01_01325 PF07690 Major Facilitator Superfamily F3L01_01330 PF07478 D-ala D-ala ligase C-terminus F3L01_01330 PF01820 D-ala D-ala ligase N-terminus F3L01_01335 PF01225 Mur ligase family, catalytic domain F3L01_01335 PF02875 Mur ligase family, glutamate ligase domain F3L01_01335 PF08245 Mur ligase middle domain F3L01_01340 PF00271 Helicase conserved C-terminal domain F3L01_01340 PF00270 DEAD/DEAH box helicase F3L01_01345 PF03851 UV-endonuclease UvdE F3L01_01350 PF01694 Rhomboid family F3L01_01355 PF01648 4'-phosphopantetheinyl transferase superfamily F3L01_01365 PF00842 Alanine racemase, C-terminal domain F3L01_01365 PF01168 Alanine racemase, N-terminal domain F3L01_01370 PF01402 Ribbon-helix-helix protein, copG family F3L01_01375 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system F3L01_01380 PF16921 Tex protein YqgF-like domain F3L01_01380 PF17674 HHH domain F3L01_01380 PF00575 S1 RNA binding domain F3L01_01380 PF09371 Tex-like protein N-terminal domain F3L01_01390 PF10263 SprT-like family F3L01_01390 PF17283 SprT-like zinc ribbon domain F3L01_01480 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE F3L01_01485 PF00814 Glycoprotease family F3L01_01490 PF00583 Acetyltransferase (GNAT) family F3L01_01495 PF00814 Glycoprotease family F3L01_01500 PF16326 ABC transporter C-terminal domain F3L01_01500 PF12848 ABC transporter F3L01_01500 PF00005 ABC transporter F3L01_01505 PF02629 CoA binding domain F3L01_01505 PF06971 Putative DNA-binding protein N-terminus F3L01_01515 PF02517 CPBP intramembrane metalloprotease F3L01_01520 PF00166 Chaperonin 10 Kd subunit F3L01_01525 PF00118 TCP-1/cpn60 chaperonin family F3L01_01530 PF00117 Glutamine amidotransferase class-I F3L01_01530 PF00958 GMP synthase C terminal domain F3L01_01530 PF02540 NAD synthase F3L01_01535 PF00860 Permease family F3L01_01540 PF00072 Response regulator receiver domain F3L01_01540 PF00486 Transcriptional regulatory protein, C terminal F3L01_01545 PF16736 Single Cache-like F3L01_01545 PF00989 PAS fold F3L01_01545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3L01_01545 PF00512 His Kinase A (phospho-acceptor) domain F3L01_01575 PF01323 DSBA-like thioredoxin domain F3L01_01605 PF02673 Bacitracin resistance protein BacA F3L01_01615 PF00005 ABC transporter F3L01_01620 PF00512 His Kinase A (phospho-acceptor) domain F3L01_01620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3L01_01625 PF00072 Response regulator receiver domain F3L01_01625 PF00486 Transcriptional regulatory protein, C terminal F3L01_01645 PF05045 Rhamnan synthesis protein F F3L01_01645 PF14307 Glycosyltransferase WbsX F3L01_01655 PF08241 Methyltransferase domain F3L01_01665 PF01370 NAD dependent epimerase/dehydratase family F3L01_01675 PF00535 Glycosyl transferase family 2 F3L01_01695 PF00892 EamA-like transporter family F3L01_01725 PF00731 AIR carboxylase F3L01_01730 PF02222 ATP-grasp domain F3L01_01730 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain F3L01_01735 PF10397 Adenylosuccinate lyase C-terminus F3L01_01735 PF00206 Lyase F3L01_01740 PF01259 SAICAR synthetase F3L01_01745 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase F3L01_01755 PF02769 AIR synthase related protein, C-terminal domain F3L01_01755 PF00586 AIR synthase related protein, N-terminal domain F3L01_01755 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain F3L01_01760 PF00156 Phosphoribosyl transferase domain F3L01_01765 PF02769 AIR synthase related protein, C-terminal domain F3L01_01765 PF00586 AIR synthase related protein, N-terminal domain F3L01_01770 PF00551 Formyl transferase F3L01_01775 PF02142 MGS-like domain F3L01_01775 PF01808 AICARFT/IMPCHase bienzyme F3L01_01780 PF02843 Phosphoribosylglycinamide synthetase, C domain F3L01_01780 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain F3L01_01780 PF02844 Phosphoribosylglycinamide synthetase, N domain F3L01_01805 PF01884 PcrB family F3L01_01810 PF00580 UvrD/REP helicase N-terminal domain F3L01_01810 PF13361 UvrD-like helicase C-terminal domain F3L01_01815 PF00533 BRCA1 C Terminus (BRCT) domain F3L01_01815 PF03119 NAD-dependent DNA ligase C4 zinc finger domain F3L01_01815 PF01653 NAD-dependent DNA ligase adenylation domain F3L01_01815 PF12826 Helix-hairpin-helix motif F3L01_01815 PF03120 NAD-dependent DNA ligase OB-fold domain F3L01_01820 PF07537 CamS sex pheromone cAM373 precursor F3L01_01825 PF01925 Sulfite exporter TauE/SafE F3L01_01830 PF00171 Aldehyde dehydrogenase family F3L01_01835 PF00857 Isochorismatase family F3L01_01840 PF09383 NIL domain F3L01_01840 PF00005 ABC transporter F3L01_01845 PF00528 Binding-protein-dependent transport system inner membrane component F3L01_01850 PF03180 NLPA lipoprotein F3L01_01865 PF02374 Anion-transporting ATPase F3L01_01865 PF17886 HSP20-like domain found in ArsA F3L01_01870 PF01047 MarR family F3L01_01875 PF05360 yiaA/B two helix domain F3L01_01880 PF02686 Glu-tRNAGln amidotransferase C subunit F3L01_01885 PF01425 Amidase F3L01_01890 PF02637 GatB domain F3L01_01890 PF02934 GatB/GatE catalytic domain F3L01_01895 PF00781 Diacylglycerol kinase catalytic domain F3L01_01900 PF13419 Haloacid dehalogenase-like hydrolase F3L01_01905 PF00202 Aminotransferase class-III F3L01_01910 PF00158 Sigma-54 interaction domain F3L01_01915 PF00171 Aldehyde dehydrogenase family F3L01_01920 PF00893 Small Multidrug Resistance protein F3L01_01930 PF02073 Thermophilic metalloprotease (M29) F3L01_01945 PF07670 Nucleoside recognition F3L01_01945 PF01773 Na+ dependent nucleoside transporter N-terminus F3L01_01945 PF07662 Na+ dependent nucleoside transporter C-terminus F3L01_01950 PF01938 TRAM domain F3L01_01950 PF13847 Methyltransferase domain F3L01_01950 PF05958 tRNA (Uracil-5-)-methyltransferase F3L01_01955 PF01207 Dihydrouridine synthase (Dus) F3L01_01960 PF07308 Protein of unknown function (DUF1456) F3L01_01980 PF13378 Enolase C-terminal domain-like F3L01_01980 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain F3L01_01995 PF01546 Peptidase family M20/M25/M40 F3L01_01995 PF07687 Peptidase dimerisation domain F3L01_02005 PF07992 Pyridine nucleotide-disulphide oxidoreductase F3L01_02005 PF13192 Thioredoxin domain F3L01_02010 PF00578 AhpC/TSA family F3L01_02015 PF01636 Phosphotransferase enzyme family F3L01_02020 PF01008 Initiation factor 2 subunit family F3L01_02025 PF00596 Class II Aldolase and Adducin N-terminal domain F3L01_02030 PF01032 FecCD transport family F3L01_02035 PF01032 FecCD transport family F3L01_02040 PF01497 Periplasmic binding protein F3L01_02050 PF07992 Pyridine nucleotide-disulphide oxidoreductase F3L01_02065 PF12728 Helix-turn-helix domain F3L01_02090 PF13426 PAS domain F3L01_02090 PF00512 His Kinase A (phospho-acceptor) domain F3L01_02090 PF00989 PAS fold F3L01_02090 PF13188 PAS domain F3L01_02090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3L01_02110 PF10127 RNA repair pathway DNA polymerase beta family F3L01_02115 PF07690 Major Facilitator Superfamily F3L01_02120 PF00355 Rieske [2Fe-2S] domain F3L01_02120 PF01266 FAD dependent oxidoreductase F3L01_02130 PF00528 Binding-protein-dependent transport system inner membrane component F3L01_02135 PF00497 Bacterial extracellular solute-binding proteins, family 3 F3L01_02140 PF00005 ABC transporter F3L01_02145 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F3L01_02145 PF00672 HAMP domain F3L01_02145 PF12729 Four helix bundle sensory module for signal transduction F3L01_02150 PF02863 Arginine repressor, C-terminal domain F3L01_02150 PF01316 Arginine repressor, DNA binding domain F3L01_02160 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain F3L01_02160 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain F3L01_02165 PF13520 Amino acid permease F3L01_02170 PF00696 Amino acid kinase family F3L01_02175 PF00027 Cyclic nucleotide-binding domain F3L01_02175 PF13545 Crp-like helix-turn-helix domain F3L01_02185 PF01565 FAD binding domain F3L01_02185 PF08031 Berberine and berberine like F3L01_02190 PF16657 Maltogenic Amylase, C-terminal domain F3L01_02190 PF00128 Alpha amylase, catalytic domain F3L01_02195 PF02378 Phosphotransferase system, EIIC F3L01_02195 PF00367 phosphotransferase system, EIIB F3L01_02195 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 F3L01_02200 PF03372 Endonuclease/Exonuclease/phosphatase family F3L01_02205 PF01061 ABC-2 type transporter F3L01_02210 PF01751 Toprim domain F3L01_02210 PF01131 DNA topoisomerase F3L01_02215 PF02110 Hydroxyethylthiazole kinase family F3L01_02220 PF02581 Thiamine monophosphate synthase F3L01_02225 PF03605 Anaerobic c4-dicarboxylate membrane transporter F3L01_02230 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F3L01_02230 PF00672 HAMP domain F3L01_02235 PF00668 Condensation domain F3L01_02235 PF00975 Thioesterase domain F3L01_02235 PF00501 AMP-binding enzyme F3L01_02235 PF00550 Phosphopantetheine attachment site F3L01_02235 PF13193 AMP-binding enzyme C-terminal domain F3L01_02240 PF01910 Thiamine-binding protein F3L01_02245 PF00528 Binding-protein-dependent transport system inner membrane component F3L01_02255 PF00005 ABC transporter F3L01_02265 PF00041 Fibronectin type III domain F3L01_02265 PF00704 Glycosyl hydrolases family 18 F3L01_02295 PF08360 QacR-like protein, C-terminal region F3L01_02295 PF00440 Bacterial regulatory proteins, tetR family F3L01_02310 PF11700 Vacuole effluxer Atg22 like F3L01_02325 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) F3L01_02325 PF09180 Prolyl-tRNA synthetase, C-terminal F3L01_02325 PF03129 Anticodon binding domain F3L01_02335 PF00480 ROK family F3L01_02340 PF02342 TerD domain F3L01_02345 PF02342 TerD domain F3L01_02350 PF02342 TerD domain F3L01_02355 PF03741 Integral membrane protein TerC family F3L01_02360 PF14266 Putative component of 'biosynthetic module' F3L01_02365 PF05816 Toxic anion resistance protein (TelA) F3L01_02370 PF00690 Cation transporter/ATPase, N-terminus F3L01_02370 PF00689 Cation transporting ATPase, C-terminus F3L01_02375 PF06569 Protein of unknown function (DUF1128) F3L01_02380 PF01451 Low molecular weight phosphotyrosine protein phosphatase F3L01_02390 PF03631 Virulence factor BrkB F3L01_02400 PF00892 EamA-like transporter family F3L01_02420 PF09335 SNARE associated Golgi protein F3L01_02435 PF16242 Pyridoxamine 5'-phosphate oxidase like F3L01_02440 PF01699 Sodium/calcium exchanger protein F3L01_02445 PF14167 YfkD-like protein F3L01_02450 PF04055 Radical SAM superfamily F3L01_02450 PF08756 YfkB-like domain F3L01_02460 PF05683 Fumarase C-terminus F3L01_02460 PF05681 Fumarate hydratase (Fumerase) F3L01_02465 PF01522 Polysaccharide deacetylase F3L01_02470 PF00730 HhH-GPD superfamily base excision DNA repair protein F3L01_02475 PF01938 TRAM domain F3L01_02475 PF05958 tRNA (Uracil-5-)-methyltransferase F3L01_02480 PF01416 tRNA pseudouridine synthase F3L01_02490 PF02954 Bacterial regulatory protein, Fis family F3L01_02490 PF13426 PAS domain F3L01_02490 PF00158 Sigma-54 interaction domain F3L01_02500 PF00324 Amino acid permease F3L01_02505 PF07687 Peptidase dimerisation domain F3L01_02505 PF01546 Peptidase family M20/M25/M40 F3L01_02525 PF04960 Glutaminase F3L01_02535 PF02378 Phosphotransferase system, EIIC F3L01_02535 PF00367 phosphotransferase system, EIIB F3L01_02540 PF00144 Beta-lactamase F3L01_02555 PF00535 Glycosyl transferase family 2 F3L01_02560 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain F3L01_02560 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain F3L01_02560 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain F3L01_02565 PF00551 Formyl transferase F3L01_02565 PF02911 Formyl transferase, C-terminal domain F3L01_02565 PF01370 NAD dependent epimerase/dehydratase family F3L01_02570 PF00535 Glycosyl transferase family 2 F3L01_02580 PF02901 Pyruvate formate lyase-like F3L01_02580 PF01228 Glycine radical F3L01_02585 PF04055 Radical SAM superfamily F3L01_02590 PF04101 Glycosyltransferase family 28 C-terminal domain F3L01_02590 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase F3L01_02605 PF01979 Amidohydrolase family F3L01_02610 PF01370 NAD dependent epimerase/dehydratase family F3L01_02610 PF08338 Domain of unknown function (DUF1731) F3L01_02615 PF02631 RecX family F3L01_02630 PF08176 Small acid-soluble spore protein K family F3L01_02635 PF14043 WVELL protein F3L01_02640 PF04307 LexA-binding, inner membrane-associated putative hydrolase F3L01_02645 PF00730 HhH-GPD superfamily base excision DNA repair protein F3L01_02645 PF14815 NUDIX domain F3L01_02655 PF04259 Small, acid-soluble spore protein, gamma-type F3L01_02660 PF14182 YgaB-like protein F3L01_02665 PF04167 Protein of unknown function (DUF402) F3L01_02670 PF00664 ABC transporter transmembrane region F3L01_02670 PF00005 ABC transporter F3L01_02675 PF06081 Aromatic acid exporter family member 1 F3L01_02680 PF01645 Conserved region in glutamate synthase F3L01_02680 PF04898 Glutamate synthase central domain F3L01_02680 PF00310 Glutamine amidotransferases class-II F3L01_02680 PF01493 GXGXG motif F3L01_02685 PF00202 Aminotransferase class-III F3L01_02690 PF00005 ABC transporter F3L01_02705 PF07885 Ion channel F3L01_02710 PF00578 AhpC/TSA family F3L01_02715 PF01475 Ferric uptake regulator family F3L01_02725 PF11023 Zinc-ribbon containing domain F3L01_02825 PF01709 Transcriptional regulator F3L01_02830 PF13344 Haloacid dehalogenase-like hydrolase F3L01_02830 PF00293 NUDIX domain F3L01_02835 PF00905 Penicillin binding protein transpeptidase domain F3L01_02835 PF00912 Transglycosylase F3L01_02840 PF13462 Thioredoxin F3L01_02850 PF08331 Domain of unknown function (DUF1730) F3L01_02855 PF12671 Putative amidase domain F3L01_02860 PF00588 SpoU rRNA Methylase family F3L01_02865 PF03707 Bacterial signalling protein N terminal repeat F3L01_02865 PF00990 Diguanylate cyclase, GGDEF domain F3L01_02865 PF00563 EAL domain F3L01_02870 PF08298 PrkA AAA domain F3L01_02870 PF06798 PrkA serine protein kinase C-terminal domain F3L01_02875 PF04285 Protein of unknown function (DUF444) F3L01_02890 PF02028 BCCT, betaine/carnitine/choline family transporter F3L01_02895 PF08453 Peptidase family M9 N-terminal F3L01_02895 PF18496 Collagenase G catalytic helper subdomain F3L01_02895 PF01752 Collagenase F3L01_02905 PF15975 Flotillin F3L01_02905 PF01145 SPFH domain / Band 7 family F3L01_02910 PF02743 Cache domain F3L01_02910 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F3L01_02910 PF00672 HAMP domain F3L01_02915 PF00989 PAS fold F3L01_02915 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain F3L01_02915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3L01_02915 PF17203 Single cache domain 3 F3L01_02920 PF12431 Transcriptional regulator F3L01_02920 PF00072 Response regulator receiver domain F3L01_02925 PF03600 Citrate transporter F3L01_02950 PF04309 Glycerol-3-phosphate responsive antiterminator F3L01_02955 PF17912 MalK OB fold domain F3L01_02955 PF00005 ABC transporter F3L01_02960 PF00528 Binding-protein-dependent transport system inner membrane component F3L01_02965 PF00528 Binding-protein-dependent transport system inner membrane component F3L01_02970 PF13416 Bacterial extracellular solute-binding protein F3L01_02975 PF00149 Calcineurin-like phosphoesterase F3L01_02980 PF00486 Transcriptional regulatory protein, C terminal F3L01_02980 PF00072 Response regulator receiver domain F3L01_02985 PF00512 His Kinase A (phospho-acceptor) domain F3L01_02985 PF00672 HAMP domain F3L01_02985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3L01_02995 PF13529 Peptidase_C39 like family F3L01_03000 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F3L01_03000 PF00672 HAMP domain F3L01_03000 PF02743 Cache domain F3L01_03005 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain F3L01_03005 PF17203 Single cache domain 3 F3L01_03005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3L01_03005 PF00989 PAS fold F3L01_03010 PF00072 Response regulator receiver domain F3L01_03015 PF03390 2-hydroxycarboxylate transporter family F3L01_03020 PF03949 Malic enzyme, NAD binding domain F3L01_03020 PF00390 Malic enzyme, N-terminal domain F3L01_03030 PF00892 EamA-like transporter family F3L01_03035 PF00392 Bacterial regulatory proteins, gntR family F3L01_03035 PF00155 Aminotransferase class I and II F3L01_03045 PF00989 PAS fold F3L01_03045 PF00512 His Kinase A (phospho-acceptor) domain F3L01_03045 PF18698 Histidine kinase sensor domain F3L01_03045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3L01_03045 PF00672 HAMP domain F3L01_03050 PF00072 Response regulator receiver domain F3L01_03050 PF00486 Transcriptional regulatory protein, C terminal F3L01_03060 PF02634 FdhD/NarQ family F3L01_03065 PF04879 Molybdopterin oxidoreductase Fe4S4 domain F3L01_03065 PF00384 Molybdopterin oxidoreductase F3L01_03065 PF01568 Molydopterin dinucleotide binding domain F3L01_03065 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region F3L01_03065 PF00037 4Fe-4S binding domain F3L01_03070 PF07849 Protein of unknown function (DUF1641) F3L01_03080 PF01262 Alanine dehydrogenase/PNT, C-terminal domain F3L01_03080 PF05222 Alanine dehydrogenase/PNT, N-terminal domain F3L01_03095 PF01022 Bacterial regulatory protein, arsR family F3L01_03100 PF00403 Heavy-metal-associated domain F3L01_03120 PF02868 Thermolysin metallopeptidase, alpha-helical domain F3L01_03120 PF07504 Fungalysin/Thermolysin Propeptide Motif F3L01_03120 PF03413 Peptidase propeptide and YPEB domain F3L01_03120 PF01447 Thermolysin metallopeptidase, catalytic domain F3L01_03140 PF04294 VanW like protein F3L01_03145 PF03816 Cell envelope-related transcriptional attenuator domain F3L01_03150 PF07662 Na+ dependent nucleoside transporter C-terminus F3L01_03150 PF01773 Na+ dependent nucleoside transporter N-terminus F3L01_03155 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily F3L01_03160 PF00571 CBS domain F3L01_03160 PF01595 Cyclin M transmembrane N-terminal domain F3L01_03160 PF03471 Transporter associated domain F3L01_03165 PF00206 Lyase F3L01_03165 PF10415 Fumarase C C-terminus F3L01_03170 PF02652 L-lactate permease F3L01_03175 PF01022 Bacterial regulatory protein, arsR family F3L01_03180 PF08141 Small acid-soluble spore protein H family F3L01_03185 PF00854 POT family F3L01_03190 PF01497 Periplasmic binding protein F3L01_03195 PF01032 FecCD transport family F3L01_03200 PF01032 FecCD transport family F3L01_03205 PF00005 ABC transporter F3L01_03215 PF00155 Aminotransferase class I and II F3L01_03220 PF01370 NAD dependent epimerase/dehydratase family F3L01_03225 PF13344 Haloacid dehalogenase-like hydrolase F3L01_03225 PF00293 NUDIX domain F3L01_03230 PF00092 von Willebrand factor type A domain F3L01_03235 PF07728 AAA domain (dynein-related subfamily) F3L01_03240 PF13396 Phospholipase_D-nuclease N-terminal F3L01_03240 PF13091 PLD-like domain F3L01_03250 PF03707 Bacterial signalling protein N terminal repeat F3L01_03250 PF00990 Diguanylate cyclase, GGDEF domain F3L01_03250 PF00563 EAL domain F3L01_03255 PF13520 Amino acid permease F3L01_03260 PF00392 Bacterial regulatory proteins, gntR family F3L01_03260 PF07702 UTRA domain F3L01_03265 PF02378 Phosphotransferase system, EIIC F3L01_03265 PF00367 phosphotransferase system, EIIB F3L01_03270 PF16657 Maltogenic Amylase, C-terminal domain F3L01_03270 PF00128 Alpha amylase, catalytic domain F3L01_03285 PF03323 Bacillus/Clostridium GerA spore germination protein F3L01_03290 PF07730 Histidine kinase F3L01_03290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3L01_03290 PF13492 GAF domain F3L01_03295 PF00072 Response regulator receiver domain F3L01_03295 PF00196 Bacterial regulatory proteins, luxR family F3L01_03300 PF05922 Peptidase inhibitor I9 F3L01_03300 PF13860 FlgD Ig-like domain F3L01_03300 PF02225 PA domain F3L01_03300 PF00082 Subtilase family F3L01_03305 PF12389 Camelysin metallo-endopeptidase F3L01_03310 PF01636 Phosphotransferase enzyme family F3L01_03315 PF01235 Sodium:alanine symporter family F3L01_03325 PF00005 ABC transporter F3L01_03330 PF00497 Bacterial extracellular solute-binding proteins, family 3 F3L01_03335 PF00528 Binding-protein-dependent transport system inner membrane component F3L01_03340 PF00528 Binding-protein-dependent transport system inner membrane component F3L01_03345 PF00324 Amino acid permease F3L01_03370 PF08279 HTH domain F3L01_03370 PF13280 WYL domain F3L01_03375 PF01872 RibD C-terminal domain F3L01_03380 PF00989 PAS fold F3L01_03380 PF00512 His Kinase A (phospho-acceptor) domain F3L01_03380 PF18698 Histidine kinase sensor domain F3L01_03380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3L01_03380 PF00672 HAMP domain F3L01_03385 PF00486 Transcriptional regulatory protein, C terminal F3L01_03385 PF00072 Response regulator receiver domain F3L01_03395 PF01740 STAS domain F3L01_03395 PF00916 Sulfate permease family F3L01_03400 PF00582 Universal stress protein family F3L01_03410 PF07690 Major Facilitator Superfamily F3L01_03415 PF01047 MarR family F3L01_03420 PF07690 Major Facilitator Superfamily F3L01_03425 PF00356 Bacterial regulatory proteins, lacI family F3L01_03430 PF00294 pfkB family carbohydrate kinase F3L01_03435 PF05025 RbsD / FucU transport protein family F3L01_03440 PF00005 ABC transporter F3L01_03445 PF02653 Branched-chain amino acid transport system / permease component F3L01_03450 PF13407 Periplasmic binding protein domain F3L01_03455 PF00923 Transaldolase/Fructose-6-phosphate aldolase F3L01_03460 PF05547 Immune inhibitor A peptidase M6 F3L01_03470 PF00107 Zinc-binding dehydrogenase F3L01_03470 PF08240 Alcohol dehydrogenase GroES-like domain F3L01_03480 PF00882 Zinc dependent phospholipase C F3L01_03485 PF03372 Endonuclease/Exonuclease/phosphatase family F3L01_03515 PF02673 Bacitracin resistance protein BacA F3L01_03520 PF02743 Cache domain F3L01_03520 PF00672 HAMP domain F3L01_03520 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F3L01_03525 PF03990 G5-linked-Ubiquitin-like domain F3L01_03525 PF06725 3D domain F3L01_03525 PF07501 G5 domain F3L01_03530 PF01381 Helix-turn-helix F3L01_03540 PF04203 Sortase domain F3L01_03550 PF00854 POT family F3L01_03555 PF05525 Branched-chain amino acid transport protein F3L01_03570 PF00324 Amino acid permease F3L01_03575 PF00860 Permease family F3L01_03590 PF13673 Acetyltransferase (GNAT) domain F3L01_03600 PF00999 Sodium/hydrogen exchanger family F3L01_03600 PF02080 TrkA-C domain F3L01_03600 PF02254 TrkA-N domain F3L01_03610 PF00510 Cytochrome c oxidase subunit III F3L01_03620 PF02790 Cytochrome C oxidase subunit II, transmembrane domain F3L01_03625 PF00324 Amino acid permease F3L01_03630 PF13529 Peptidase_C39 like family F3L01_03635 PF07687 Peptidase dimerisation domain F3L01_03635 PF01546 Peptidase family M20/M25/M40 F3L01_03640 PF11755 Protein of unknown function (DUF3311) F3L01_03645 PF00474 Sodium:solute symporter family F3L01_03650 PF03323 Bacillus/Clostridium GerA spore germination protein F3L01_03655 PF03845 Spore germination protein F3L01_03665 PF17910 FeoB cytosolic helical domain F3L01_03665 PF02421 Ferrous iron transport protein B F3L01_03665 PF07670 Nucleoside recognition F3L01_03665 PF07664 Ferrous iron transport protein B C terminus F3L01_03670 PF07670 Nucleoside recognition F3L01_03670 PF17910 FeoB cytosolic helical domain F3L01_03670 PF02421 Ferrous iron transport protein B F3L01_03670 PF07664 Ferrous iron transport protein B C terminus F3L01_03675 PF02421 Ferrous iron transport protein B F3L01_03675 PF17910 FeoB cytosolic helical domain F3L01_03675 PF04023 FeoA domain F3L01_03675 PF07664 Ferrous iron transport protein B C terminus F3L01_03675 PF07670 Nucleoside recognition F3L01_03680 PF12849 PBP superfamily domain F3L01_03685 PF00528 Binding-protein-dependent transport system inner membrane component F3L01_03690 PF00528 Binding-protein-dependent transport system inner membrane component F3L01_03695 PF00873 AcrB/AcrD/AcrF family F3L01_03815 PF00571 CBS domain F3L01_03830 PF00246 Zinc carboxypeptidase F3L01_03830 PF08239 Bacterial SH3 domain F3L01_03835 PF03070 TENA/THI-4/PQQC family F3L01_03840 PF00005 ABC transporter F3L01_03845 PF00528 Binding-protein-dependent transport system inner membrane component F3L01_03850 PF09084 NMT1/THI5 like F3L01_03855 PF02581 Thiamine monophosphate synthase F3L01_03860 PF01266 FAD dependent oxidoreductase F3L01_03865 PF02597 ThiS family F3L01_03870 PF05690 Thiazole biosynthesis protein ThiG F3L01_03875 PF00899 ThiF family F3L01_03880 PF08543 Phosphomethylpyrimidine kinase F3L01_03905 PF03814 Potassium-transporting ATPase A subunit F3L01_03915 PF02669 K+-transporting ATPase, c chain F3L01_03920 PF02702 Osmosensitive K+ channel His kinase sensor domain F3L01_03925 PF07690 Major Facilitator Superfamily F3L01_03930 PF01047 MarR family F3L01_03940 PF00860 Permease family F3L01_03950 PF17969 L,D-transpeptidase C-terminal domain F3L01_03950 PF03734 L,D-transpeptidase catalytic domain F3L01_03960 PF00294 pfkB family carbohydrate kinase F3L01_03965 PF08244 Glycosyl hydrolases family 32 C terminal F3L01_03965 PF00251 Glycosyl hydrolases family 32 N-terminal domain F3L01_03970 PF00367 phosphotransferase system, EIIB F3L01_03970 PF02378 Phosphotransferase system, EIIC F3L01_03975 PF13407 Periplasmic binding protein domain F3L01_03975 PF00356 Bacterial regulatory proteins, lacI family F3L01_03985 PF00085 Thioredoxin F3L01_03990 PF02600 Disulfide bond formation protein DsbB F3L01_03995 PF14148 YhdB-like protein F3L01_04005 PF03845 Spore germination protein F3L01_04015 PF03323 Bacillus/Clostridium GerA spore germination protein F3L01_04025 PF00881 Nitroreductase family F3L01_04060 PF04293 SpoVR like protein F3L01_04070 PF01614 Bacterial transcriptional regulator F3L01_04070 PF09339 IclR helix-turn-helix domain F3L01_04085 PF07992 Pyridine nucleotide-disulphide oxidoreductase F3L01_04085 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain F3L01_04090 PF02583 Metal-sensitive transcriptional repressor F3L01_04095 PF00581 Rhodanese-like domain F3L01_04095 PF01206 Sulfurtransferase TusA F3L01_04100 PF00581 Rhodanese-like domain F3L01_04100 PF00753 Metallo-beta-lactamase superfamily F3L01_04105 PF01206 Sulfurtransferase TusA F3L01_04110 PF01206 Sulfurtransferase TusA F3L01_04110 PF00581 Rhodanese-like domain F3L01_04115 PF00581 Rhodanese-like domain F3L01_04120 PF13686 DsrE/DsrF/DrsH-like family F3L01_04125 PF01925 Sulfite exporter TauE/SafE F3L01_04135 PF03816 Cell envelope-related transcriptional attenuator domain F3L01_04140 PF00107 Zinc-binding dehydrogenase F3L01_04140 PF08240 Alcohol dehydrogenase GroES-like domain F3L01_04145 PF02690 Na+/Pi-cotransporter F3L01_04150 PF07690 Major Facilitator Superfamily F3L01_04165 PF08279 HTH domain F3L01_04165 PF05043 Mga helix-turn-helix domain F3L01_04165 PF00874 PRD domain F3L01_04165 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 F3L01_04170 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit F3L01_04175 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit F3L01_04180 PF02378 Phosphotransferase system, EIIC F3L01_04195 PF06725 3D domain F3L01_04195 PF01476 LysM domain F3L01_04200 PF02687 FtsX-like permease family F3L01_04200 PF12704 MacB-like periplasmic core domain F3L01_04205 PF00005 ABC transporter F3L01_04215 PF09529 Integral membrane protein (intg_mem_TP0381) F3L01_04230 PF05525 Branched-chain amino acid transport protein F3L01_04235 PF05067 Manganese containing catalase F3L01_04240 PF12652 CotJB protein F3L01_04245 PF11007 Spore coat associated protein JA (CotJA) F3L01_04260 PF02735 Ku70/Ku80 beta-barrel domain F3L01_04270 PF09335 SNARE associated Golgi protein F3L01_04300 PF13520 Amino acid permease F3L01_04305 PF00999 Sodium/hydrogen exchanger family F3L01_04315 PF01380 SIS domain F3L01_04315 PF01418 Helix-turn-helix domain, rpiR family F3L01_04320 PF13580 SIS domain F3L01_04325 PF00367 phosphotransferase system, EIIB F3L01_04325 PF02378 Phosphotransferase system, EIIC F3L01_04335 PF07681 DoxX F3L01_04350 PF00892 EamA-like transporter family F3L01_04355 PF01037 Lrp/AsnC ligand binding domain F3L01_04360 PF00206 Lyase F3L01_04360 PF14698 Argininosuccinate lyase C-terminal F3L01_04360 PF00583 Acetyltransferase (GNAT) family F3L01_04370 PF13411 MerR HTH family regulatory protein F3L01_04375 PF00893 Small Multidrug Resistance protein F3L01_04385 PF00440 Bacterial regulatory proteins, tetR family F3L01_04385 PF17934 Tetracyclin repressor-like, C-terminal domain F3L01_04390 PF07690 Major Facilitator Superfamily F3L01_04395 PF01638 HxlR-like helix-turn-helix F3L01_04405 PF02525 Flavodoxin-like fold F3L01_04410 PF12793 Sugar transport-related sRNA regulator N-term F3L01_04410 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F3L01_04415 PF07690 Major Facilitator Superfamily F3L01_04425 PF01965 DJ-1/PfpI family F3L01_04430 PF00199 Catalase F3L01_04430 PF06628 Catalase-related immune-responsive F3L01_04430 PF18011 C-terminal domain found in long catalases F3L01_04445 PF01177 Asp/Glu/Hydantoin racemase F3L01_04455 PF00171 Aldehyde dehydrogenase family F3L01_04470 PF00005 ABC transporter F3L01_04470 PF00664 ABC transporter transmembrane region F3L01_04475 PF00005 ABC transporter F3L01_04475 PF00664 ABC transporter transmembrane region F3L01_04485 PF00497 Bacterial extracellular solute-binding proteins, family 3 F3L01_04490 PF00528 Binding-protein-dependent transport system inner membrane component F3L01_04495 PF00005 ABC transporter F3L01_04500 PF00269 Small, acid-soluble spore proteins, alpha/beta type F3L01_04510 PF14398 YheC/D like ATP-grasp F3L01_04520 PF04286 Protein of unknown function (DUF445) F3L01_04525 PF06133 Control of competence regulator ComK, YlbF/YmcA F3L01_04530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3L01_04530 PF07730 Histidine kinase F3L01_04535 PF00072 Response regulator receiver domain F3L01_04535 PF00196 Bacterial regulatory proteins, luxR family F3L01_04540 PF00205 Thiamine pyrophosphate enzyme, central domain F3L01_04540 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain F3L01_04540 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain F3L01_04545 PF03306 Alpha-acetolactate decarboxylase F3L01_04555 PF02245 Methylpurine-DNA glycosylase (MPG) F3L01_04565 PF00746 LPXTG cell wall anchor motif F3L01_04565 PF17210 SdrD B-like domain F3L01_04565 PF17961 Bacterial Ig domain F3L01_04565 PF10425 C-terminus of bacterial fibrinogen-binding adhesin F3L01_04565 PF04650 YSIRK type signal peptide F3L01_04570 PF01510 N-acetylmuramoyl-L-alanine amidase F3L01_04570 PF01471 Putative peptidoglycan binding domain F3L01_04575 PF04055 Radical SAM superfamily F3L01_04580 PF13193 AMP-binding enzyme C-terminal domain F3L01_04580 PF00501 AMP-binding enzyme F3L01_04595 PF00916 Sulfate permease family F3L01_04595 PF01740 STAS domain F3L01_04600 PF14667 Polysaccharide biosynthesis C-terminal domain F3L01_04600 PF01943 Polysaccharide biosynthesis protein F3L01_04620 PF00378 Enoyl-CoA hydratase/isomerase F3L01_04640 PF05343 M42 glutamyl aminopeptidase F3L01_04645 PF01520 N-acetylmuramoyl-L-alanine amidase F3L01_04645 PF00395 S-layer homology domain F3L01_04655 PF11121 Protein of unknown function (DUF2639) F3L01_04660 PF05544 Proline racemase F3L01_04665 PF02423 Ornithine cyclodeaminase/mu-crystallin family F3L01_04670 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F3L01_04675 PF00528 Binding-protein-dependent transport system inner membrane component F3L01_04680 PF00528 Binding-protein-dependent transport system inner membrane component F3L01_04680 PF12911 N-terminal TM domain of oligopeptide transport permease C F3L01_04685 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F3L01_04685 PF00005 ABC transporter F3L01_04690 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F3L01_04690 PF00005 ABC transporter F3L01_04700 PF16123 Hydroxyacylglutathione hydrolase C-terminus F3L01_04700 PF00753 Metallo-beta-lactamase superfamily F3L01_04725 PF01609 Transposase DDE domain F3L01_04735 PF02423 Ornithine cyclodeaminase/mu-crystallin family F3L01_04740 PF06013 Proteins of 100 residues with WXG F3L01_04755 PF04740 LXG domain of WXG superfamily F3L01_04755 PF14436 Bacterial EndoU nuclease F3L01_04815 PF07348 Syd protein (SUKH-2) F3L01_04895 PF00083 Sugar (and other) transporter F3L01_04900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3L01_04900 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain F3L01_04905 PF12431 Transcriptional regulator F3L01_04905 PF08279 HTH domain F3L01_04905 PF00072 Response regulator receiver domain F3L01_04910 PF03401 Tripartite tricarboxylate transporter family receptor F3L01_04915 PF00145 C-5 cytosine-specific DNA methylase F3L01_04950 PF06445 GyrI-like small molecule binding domain F3L01_04950 PF13411 MerR HTH family regulatory protein F3L01_04965 PF03796 DnaB-like helicase C terminal domain F3L01_04965 PF00772 DnaB-like helicase N terminal domain F3L01_04975 PF01925 Sulfite exporter TauE/SafE F3L01_04990 PF07690 Major Facilitator Superfamily F3L01_05000 PF09680 Family of unknown function F3L01_05005 PF13302 Acetyltransferase (GNAT) domain F3L01_05025 PF13026 Protein of unknown function (DUF3887) F3L01_05025 PF12146 Serine aminopeptidase, S33 F3L01_05055 PF01066 CDP-alcohol phosphatidyltransferase F3L01_05070 PF02733 Dak1 domain F3L01_05085 PF02733 Dak1 domain F3L01_05125 PF00395 S-layer homology domain F3L01_05150 PF12697 Alpha/beta hydrolase family F3L01_05170 PF11181 Heat induced stress protein YflT F3L01_05175 PF05532 CsbD-like F3L01_05190 PF01740 STAS domain F3L01_05195 PF13581 Histidine kinase-like ATPase domain F3L01_05200 PF04539 Sigma-70 region 3 F3L01_05200 PF04545 Sigma-70, region 4 F3L01_05200 PF04542 Sigma-70 region 2 F3L01_05210 PF07228 Stage II sporulation protein E (SpoIIE) F3L01_05210 PF13426 PAS domain F3L01_05215 PF01739 CheR methyltransferase, SAM binding domain F3L01_05215 PF03705 CheR methyltransferase, all-alpha domain F3L01_05220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3L01_05220 PF00512 His Kinase A (phospho-acceptor) domain F3L01_05220 PF00672 HAMP domain F3L01_05220 PF00072 Response regulator receiver domain F3L01_05220 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) F3L01_05220 PF01627 Hpt domain F3L01_05240 PF01906 Putative heavy-metal-binding F3L01_05250 PF08240 Alcohol dehydrogenase GroES-like domain F3L01_05250 PF00107 Zinc-binding dehydrogenase F3L01_05260 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family F3L01_05265 PF11121 Protein of unknown function (DUF2639) F3L01_05280 PF00149 Calcineurin-like phosphoesterase F3L01_05285 PF13514 AAA domain F3L01_05290 PF01336 OB-fold nucleic acid binding domain F3L01_05290 PF01966 HD domain F3L01_05295 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily F3L01_05300 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily F3L01_05305 PF18801 response regulator aspartate phosphatase H, N terminal F3L01_05305 PF17874 MalT-like TPR region F3L01_05315 PF00561 alpha/beta hydrolase fold F3L01_05315 PF08386 TAP-like protein F3L01_05320 PF14147 Sporulation protein YhaL F3L01_05340 PF00190 Cupin F3L01_05345 PF01381 Helix-turn-helix F3L01_05350 PF04309 Glycerol-3-phosphate responsive antiterminator F3L01_05355 PF00230 Major intrinsic protein F3L01_05360 PF00370 FGGY family of carbohydrate kinases, N-terminal domain F3L01_05360 PF02782 FGGY family of carbohydrate kinases, C-terminal domain F3L01_05365 PF01266 FAD dependent oxidoreductase F3L01_05365 PF16901 C-terminal domain of alpha-glycerophosphate oxidase F3L01_05370 PF03551 Transcriptional regulator PadR-like family F3L01_05380 PF08281 Sigma-70, region 4 F3L01_05380 PF04542 Sigma-70 region 2 F3L01_05405 PF13538 UvrD-like helicase C-terminal domain F3L01_05435 PF01047 MarR family F3L01_05440 PF12732 YtxH-like protein F3L01_05445 PF01230 HIT domain F3L01_05450 PF00005 ABC transporter F3L01_05455 PF05975 Bacterial ABC transporter protein EcsB F3L01_05460 PF12787 EcsC protein family F3L01_05475 PF03703 Bacterial PH domain F3L01_05480 PF03703 Bacterial PH domain F3L01_05505 PF10014 2OG-Fe dioxygenase F3L01_05510 PF00892 EamA-like transporter family F3L01_05515 PF03703 Bacterial PH domain F3L01_05520 PF03703 Bacterial PH domain F3L01_05525 PF03992 Antibiotic biosynthesis monooxygenase F3L01_05530 PF00905 Penicillin binding protein transpeptidase domain F3L01_05530 PF00912 Transglycosylase F3L01_05535 PF01208 Uroporphyrinogen decarboxylase (URO-D) F3L01_05570 PF03965 Penicillinase repressor F3L01_05580 PF00440 Bacterial regulatory proteins, tetR family F3L01_05580 PF17932 Tetracyclin repressor-like, C-terminal domain F3L01_05605 PF13302 Acetyltransferase (GNAT) domain F3L01_05610 PF00356 Bacterial regulatory proteins, lacI family F3L01_05615 PF14149 YhfH-like protein F3L01_05620 PF12706 Beta-lactamase superfamily domain F3L01_05625 PF10437 Bacterial lipoate protein ligase C-terminus F3L01_05625 PF03099 Biotin/lipoate A/B protein ligase family F3L01_05635 PF00501 AMP-binding enzyme F3L01_05635 PF13193 AMP-binding enzyme C-terminal domain F3L01_05640 PF00395 S-layer homology domain F3L01_05640 PF01520 N-acetylmuramoyl-L-alanine amidase F3L01_05650 PF00528 Binding-protein-dependent transport system inner membrane component F3L01_05655 PF00528 Binding-protein-dependent transport system inner membrane component F3L01_05660 PF12857 TOBE-like domain F3L01_05660 PF17850 CysA C-terminal regulatory domain F3L01_05660 PF00005 ABC transporter F3L01_05725 PF07968 Leukocidin/Hemolysin toxin family F3L01_05735 PF00149 Calcineurin-like phosphoesterase F3L01_05740 PF01966 HD domain F3L01_05750 PF04542 Sigma-70 region 2 F3L01_05750 PF08281 Sigma-70, region 4 F3L01_05755 PF12833 Helix-turn-helix domain F3L01_05755 PF06445 GyrI-like small molecule binding domain F3L01_05765 PF00512 His Kinase A (phospho-acceptor) domain F3L01_05765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3L01_05770 PF00486 Transcriptional regulatory protein, C terminal F3L01_05770 PF00072 Response regulator receiver domain F3L01_05790 PF16491 CAAX prenyl protease N-terminal, five membrane helices F3L01_05790 PF01435 Peptidase family M48 F3L01_05795 PF00672 HAMP domain F3L01_05795 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F3L01_05795 PF02743 Cache domain F3L01_05800 PF00395 S-layer homology domain F3L01_05800 PF00331 Glycosyl hydrolase family 10 F3L01_05800 PF02018 Carbohydrate binding domain F3L01_05800 PF06452 Carbohydrate family 9 binding domain-like F3L01_05810 PF01274 Malate synthase F3L01_05815 PF00463 Isocitrate lyase family F3L01_05830 PF00313 'Cold-shock' DNA-binding domain F3L01_05850 PF09335 SNARE associated Golgi protein F3L01_05855 PF10502 Signal peptidase, peptidase S26 F3L01_05860 PF13361 UvrD-like helicase C-terminal domain F3L01_05860 PF12705 PD-(D/E)XK nuclease superfamily F3L01_05865 PF12705 PD-(D/E)XK nuclease superfamily F3L01_05865 PF13361 UvrD-like helicase C-terminal domain F3L01_05865 PF00580 UvrD/REP helicase N-terminal domain F3L01_05870 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain F3L01_05870 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain F3L01_05870 PF01000 RNA polymerase Rpb3/RpoA insert domain F3L01_05875 PF10676 Spore germination protein gerPA/gerPF F3L01_05880 PF10970 Spore germination protein GerPE F3L01_05890 PF10737 Spore germination protein GerPC F3L01_05895 PF10803 Spore germination GerPB F3L01_05900 PF10676 Spore germination protein gerPA/gerPF F3L01_05905 PF09388 Spo0E like sporulation regulatory protein F3L01_05910 PF01557 Fumarylacetoacetate (FAA) hydrolase family F3L01_05920 PF00202 Aminotransferase class-III F3L01_05925 PF07457 Protein of unknown function (DUF1516) F3L01_05945 PF06628 Catalase-related immune-responsive F3L01_05945 PF00199 Catalase F3L01_05950 PF00909 Ammonium Transporter Family F3L01_05970 PF04461 Protein of unknown function (DUF520) F3L01_05975 PF13509 S1 domain F3L01_05975 PF17783 CvfB-like winged helix domain F3L01_05980 PF05593 RHS Repeat F3L01_06000 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) F3L01_06000 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 F3L01_06005 PF12758 Protein of unknown function (DUF3813) F3L01_06020 PF14168 YjzC-like protein F3L01_06025 PF10431 C-terminal, D2-small domain, of ClpB protein F3L01_06025 PF00004 ATPase family associated with various cellular activities (AAA) F3L01_06025 PF07724 AAA domain (Cdc48 subfamily) F3L01_06025 PF17871 AAA lid domain F3L01_06025 PF02861 Clp amino terminal domain, pathogenicity island component F3L01_06045 PF10815 ComZ F3L01_06050 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal F3L01_06050 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III F3L01_06055 PF02801 Beta-ketoacyl synthase, C-terminal domain F3L01_06055 PF00109 Beta-ketoacyl synthase, N-terminal domain F3L01_06060 PF10026 Predicted Zn-dependent protease (DUF2268) F3L01_06065 PF12227 Protein of unknown function (DUF3603) F3L01_06070 PF00579 tRNA synthetases class I (W and Y) F3L01_06090 PF00528 Binding-protein-dependent transport system inner membrane component F3L01_06095 PF12911 N-terminal TM domain of oligopeptide transport permease C F3L01_06095 PF00528 Binding-protein-dependent transport system inner membrane component F3L01_06100 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F3L01_06100 PF00005 ABC transporter F3L01_06105 PF00005 ABC transporter F3L01_06105 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F3L01_06110 PF01554 MatE F3L01_06115 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F3L01_06125 PF03960 ArsC family F3L01_06130 PF03741 Integral membrane protein TerC family F3L01_06135 PF05389 Negative regulator of genetic competence (MecA) F3L01_06140 PF13396 Phospholipase_D-nuclease N-terminal F3L01_06140 PF13091 PLD-like domain F3L01_06150 PF08439 Oligopeptidase F F3L01_06150 PF01432 Peptidase family M3 F3L01_06160 PF01152 Bacterial-like globin F3L01_06165 PF01928 CYTH domain F3L01_06175 PF04607 Region found in RelA / SpoT proteins F3L01_06180 PF01513 ATP-NAD kinase F3L01_06185 PF00849 RNA pseudouridylate synthase F3L01_06195 PF00149 Calcineurin-like phosphoesterase F3L01_06200 PF01098 Cell cycle protein F3L01_06205 PF00535 Glycosyl transferase family 2 F3L01_06210 PF08241 Methyltransferase domain F3L01_06215 PF05711 Macrocin-O-methyltransferase (TylF) F3L01_06225 PF13181 Tetratricopeptide repeat F3L01_06225 PF00535 Glycosyl transferase family 2 F3L01_06245 PF00483 Nucleotidyl transferase F3L01_06250 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase F3L01_06255 PF16363 GDP-mannose 4,6 dehydratase F3L01_06260 PF04321 RmlD substrate binding domain F3L01_06280 PF07098 Protein of unknown function (DUF1360) F3L01_06300 PF13361 UvrD-like helicase C-terminal domain F3L01_06300 PF00580 UvrD/REP helicase N-terminal domain F3L01_06305 PF13673 Acetyltransferase (GNAT) domain F3L01_06315 PF00756 Putative esterase F3L01_06330 PF02368 Bacterial Ig-like domain (group 2) F3L01_06335 PF00474 Sodium:solute symporter family F3L01_06340 PF04715 Anthranilate synthase component I, N terminal region F3L01_06340 PF00425 chorismate binding enzyme F3L01_06345 PF00591 Glycosyl transferase family, a/b domain F3L01_06345 PF02885 Glycosyl transferase family, helical bundle domain F3L01_06345 PF00117 Glutamine amidotransferase class-I F3L01_06355 PF00218 Indole-3-glycerol phosphate synthase F3L01_06360 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase F3L01_06365 PF00291 Pyridoxal-phosphate dependent enzyme F3L01_06370 PF00290 Tryptophan synthase alpha chain F3L01_06380 PF02652 L-lactate permease F3L01_06385 PF10042 Uncharacterized conserved protein (DUF2278) F3L01_06410 PF07992 Pyridine nucleotide-disulphide oxidoreductase F3L01_06410 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain F3L01_06420 PF00881 Nitroreductase family F3L01_06435 PF02817 e3 binding domain F3L01_06435 PF00364 Biotin-requiring enzyme F3L01_06435 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) F3L01_06440 PF00676 Dehydrogenase E1 component F3L01_06440 PF02779 Transketolase, pyrimidine binding domain F3L01_06440 PF16870 2-oxoglutarate dehydrogenase C-terminal F3L01_06470 PF13732 Domain of unknown function (DUF4162) F3L01_06470 PF00005 ABC transporter F3L01_06505 PF07943 Penicillin-binding protein 5, C-terminal domain F3L01_06505 PF00768 D-alanyl-D-alanine carboxypeptidase F3L01_06515 PF12389 Camelysin metallo-endopeptidase F3L01_06525 PF12389 Camelysin metallo-endopeptidase F3L01_06530 PF01381 Helix-turn-helix F3L01_06530 PF08671 Anti-repressor SinI F3L01_06540 PF05547 Immune inhibitor A peptidase M6 F3L01_06545 PF00171 Aldehyde dehydrogenase family F3L01_06550 PF08402 TOBE domain F3L01_06550 PF00005 ABC transporter F3L01_06555 PF00528 Binding-protein-dependent transport system inner membrane component F3L01_06560 PF00528 Binding-protein-dependent transport system inner membrane component F3L01_06565 PF13416 Bacterial extracellular solute-binding protein F3L01_06570 PF01569 PAP2 superfamily F3L01_06575 PF03176 MMPL family F3L01_06585 PF01479 S4 domain F3L01_06585 PF00849 RNA pseudouridylate synthase F3L01_06595 PF00188 Cysteine-rich secretory protein family F3L01_06600 PF13183 4Fe-4S dicluster domain F3L01_06600 PF02754 Cysteine-rich domain F3L01_06605 PF01565 FAD binding domain F3L01_06605 PF02913 FAD linked oxidases, C-terminal domain F3L01_06610 PF17853 GGDEF-like domain F3L01_06610 PF05651 Putative sugar diacid recognition F3L01_06610 PF13556 PucR C-terminal helix-turn-helix domain F3L01_06620 PF00072 Response regulator receiver domain F3L01_06620 PF00486 Transcriptional regulatory protein, C terminal F3L01_06625 PF00512 His Kinase A (phospho-acceptor) domain F3L01_06625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3L01_06625 PF00989 PAS fold F3L01_06625 PF18698 Histidine kinase sensor domain F3L01_06625 PF00672 HAMP domain F3L01_06630 PF07729 FCD domain F3L01_06630 PF00392 Bacterial regulatory proteins, gntR family F3L01_06635 PF02754 Cysteine-rich domain F3L01_06640 PF11870 Domain of unknown function (DUF3390) F3L01_06640 PF13183 4Fe-4S dicluster domain F3L01_06640 PF02589 LUD domain F3L01_06645 PF02589 LUD domain F3L01_06650 PF06750 Bacterial Peptidase A24 N-terminal domain F3L01_06650 PF01478 Type IV leader peptidase family F3L01_06660 PF01226 Formate/nitrite transporter F3L01_06665 PF03741 Integral membrane protein TerC family F3L01_06670 PF02386 Cation transport protein F3L01_06675 PF00269 Small, acid-soluble spore proteins, alpha/beta type F3L01_06680 PF01575 MaoC like domain F3L01_06705 PF00561 alpha/beta hydrolase fold F3L01_06715 PF02386 Cation transport protein F3L01_06735 PF00005 ABC transporter F3L01_06735 PF08402 TOBE domain F3L01_06740 PF00528 Binding-protein-dependent transport system inner membrane component F3L01_06745 PF13419 Haloacid dehalogenase-like hydrolase F3L01_06750 PF00266 Aminotransferase class-V F3L01_06760 PF08220 DeoR-like helix-turn-helix domain F3L01_06760 PF00455 DeoR C terminal sensor domain F3L01_06770 PF00596 Class II Aldolase and Adducin N-terminal domain F3L01_06780 PF04748 Divergent polysaccharide deacetylase F3L01_06785 PF09388 Spo0E like sporulation regulatory protein F3L01_06790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3L01_06790 PF00512 His Kinase A (phospho-acceptor) domain F3L01_06790 PF02743 Cache domain F3L01_06795 PF01047 MarR family F3L01_06805 PF12867 DinB superfamily F3L01_06810 PF13426 PAS domain F3L01_06810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3L01_06810 PF00989 PAS fold F3L01_06810 PF00512 His Kinase A (phospho-acceptor) domain F3L01_06810 PF13188 PAS domain F3L01_06815 PF06508 Queuosine biosynthesis protein QueC F3L01_06820 PF01242 6-pyruvoyl tetrahydropterin synthase F3L01_06825 PF04055 Radical SAM superfamily F3L01_06830 PF14489 QueF-like protein F3L01_06835 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) F3L01_06870 PF07972 NrdI Flavodoxin like F3L01_06875 PF02867 Ribonucleotide reductase, barrel domain F3L01_06875 PF08343 Ribonucleotide reductase N-terminal F3L01_06875 PF00317 Ribonucleotide reductase, all-alpha domain F3L01_06880 PF00268 Ribonucleotide reductase, small chain F3L01_06885 PF00392 Bacterial regulatory proteins, gntR family F3L01_06890 PF00005 ABC transporter F3L01_06900 PF00005 ABC transporter F3L01_06920 PF01037 Lrp/AsnC ligand binding domain F3L01_06930 PF00857 Isochorismatase family F3L01_06940 PF02016 LD-carboxypeptidase N-terminal domain F3L01_06940 PF17676 LD-carboxypeptidase C-terminal domain F3L01_06945 PF03060 Nitronate monooxygenase F3L01_06950 PF04914 DltD protein F3L01_06955 PF00550 Phosphopantetheine attachment site F3L01_06960 PF03062 MBOAT, membrane-bound O-acyltransferase family F3L01_06965 PF00501 AMP-binding enzyme F3L01_06965 PF13193 AMP-binding enzyme C-terminal domain F3L01_06975 PF01546 Peptidase family M20/M25/M40 F3L01_06975 PF07687 Peptidase dimerisation domain F3L01_06980 PF00258 Flavodoxin F3L01_06990 PF01636 Phosphotransferase enzyme family F3L01_07005 PF01554 MatE F3L01_07010 PF02673 Bacitracin resistance protein BacA F3L01_07025 PF01047 MarR family F3L01_07035 PF00375 Sodium:dicarboxylate symporter family F3L01_07040 PF02386 Cation transport protein F3L01_07050 PF09579 Sporulation protein YtfJ (Spore_YtfJ) F3L01_07060 PF03698 Uncharacterised protein family (UPF0180) F3L01_07070 PF01063 Amino-transferase class IV F3L01_07075 PF00205 Thiamine pyrophosphate enzyme, central domain F3L01_07075 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain F3L01_07075 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain F3L01_07080 PF01842 ACT domain F3L01_07080 PF10369 Small subunit of acetolactate synthase F3L01_07085 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain F3L01_07085 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain F3L01_07090 PF00682 HMGL-like F3L01_07090 PF08502 LeuA allosteric (dimerisation) domain F3L01_07095 PF00180 Isocitrate/isopropylmalate dehydrogenase F3L01_07100 PF00330 Aconitase family (aconitate hydratase) F3L01_07105 PF00694 Aconitase C-terminal domain F3L01_07110 PF13393 Histidyl-tRNA synthetase F3L01_07115 PF01634 ATP phosphoribosyltransferase F3L01_07120 PF00815 Histidinol dehydrogenase F3L01_07125 PF00475 Imidazoleglycerol-phosphate dehydratase F3L01_07130 PF00117 Glutamine amidotransferase class-I F3L01_07135 PF00977 Histidine biosynthesis protein F3L01_07140 PF00977 Histidine biosynthesis protein F3L01_07145 PF01502 Phosphoribosyl-AMP cyclohydrolase F3L01_07150 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase F3L01_07165 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain F3L01_07165 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain F3L01_07170 PF01066 CDP-alcohol phosphatidyltransferase F3L01_07175 PF00884 Sulfatase F3L01_07185 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain F3L01_07185 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain F3L01_07195 PF01507 Phosphoadenosine phosphosulfate reductase family F3L01_07200 PF01747 ATP-sulfurylase F3L01_07200 PF14306 PUA-like domain F3L01_07210 PF01077 Nitrite and sulphite reductase 4Fe-4S domain F3L01_07210 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain F3L01_07220 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases F3L01_07225 PF01903 CbiX F3L01_07235 PF00209 Sodium:neurotransmitter symporter family F3L01_07245 PF00375 Sodium:dicarboxylate symporter family F3L01_07255 PF03553 Na+/H+ antiporter family F3L01_07270 PF09922 Cell wall-active antibiotics response 4TMS YvqF F3L01_07275 PF00672 HAMP domain F3L01_07275 PF07730 Histidine kinase F3L01_07275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3L01_07280 PF00072 Response regulator receiver domain F3L01_07280 PF00196 Bacterial regulatory proteins, luxR family F3L01_07290 PF05525 Branched-chain amino acid transport protein F3L01_07300 PF01209 ubiE/COQ5 methyltransferase family F3L01_07325 PF00042 Globin F3L01_07325 PF00970 Oxidoreductase FAD-binding domain F3L01_07325 PF00175 Oxidoreductase NAD-binding domain F3L01_07340 PF01925 Sulfite exporter TauE/SafE F3L01_07345 PF01384 Phosphate transporter family F3L01_07350 PF01865 Protein of unknown function DUF47 F3L01_07355 PF00912 Transglycosylase F3L01_07355 PF00905 Penicillin binding protein transpeptidase domain F3L01_07370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3L01_07370 PF00512 His Kinase A (phospho-acceptor) domain F3L01_07370 PF00989 PAS fold F3L01_07375 PF01904 Protein of unknown function DUF72 F3L01_07385 PF00589 Phage integrase family F3L01_07390 PF00512 His Kinase A (phospho-acceptor) domain F3L01_07390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3L01_07390 PF00989 PAS fold F3L01_07390 PF16736 Single Cache-like F3L01_07395 PF01048 Phosphorylase superfamily F3L01_07405 PF09924 Uncharacterised conserved protein (DUF2156) F3L01_07405 PF03706 Lysylphosphatidylglycerol synthase TM region F3L01_07420 PF02777 Iron/manganese superoxide dismutases, C-terminal domain F3L01_07420 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain F3L01_07425 PF00768 D-alanyl-D-alanine carboxypeptidase F3L01_07425 PF07943 Penicillin-binding protein 5, C-terminal domain F3L01_07430 PF07670 Nucleoside recognition F3L01_07435 PF07670 Nucleoside recognition F3L01_07440 PF00849 RNA pseudouridylate synthase F3L01_07440 PF01479 S4 domain F3L01_07445 PF00578 AhpC/TSA family F3L01_07450 PF05140 ResB-like family F3L01_07455 PF01578 Cytochrome C assembly protein F3L01_07460 PF00072 Response regulator receiver domain F3L01_07460 PF00486 Transcriptional regulatory protein, C terminal F3L01_07465 PF00989 PAS fold F3L01_07465 PF00512 His Kinase A (phospho-acceptor) domain F3L01_07465 PF18698 Histidine kinase sensor domain F3L01_07465 PF00672 HAMP domain F3L01_07465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3L01_07470 PF01923 Cobalamin adenosyltransferase F3L01_07485 PF12822 ECF transporter, substrate-specific component F3L01_07500 PF00271 Helicase conserved C-terminal domain F3L01_07500 PF00270 DEAD/DEAH box helicase F3L01_07505 PF02517 CPBP intramembrane metalloprotease F3L01_07515 PF00149 Calcineurin-like phosphoesterase F3L01_07520 PF13411 MerR HTH family regulatory protein F3L01_07525 PF05389 Negative regulator of genetic competence (MecA) F3L01_07530 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase F3L01_07530 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain F3L01_07555 PF00710 Asparaginase, N-terminal F3L01_07555 PF17763 Glutaminase/Asparaginase C-terminal domain F3L01_07560 PF02224 Cytidylate kinase F3L01_07565 PF00575 S1 RNA binding domain F3L01_07570 PF01070 FMN-dependent dehydrogenase F3L01_07575 PF14140 YpzI-like protein F3L01_07585 PF14045 YIEGIA protein F3L01_07595 PF01926 50S ribosome-binding GTPase F3L01_07595 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal F3L01_07600 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus F3L01_07600 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus F3L01_07610 PF10966 Protein of unknown function (DUF2768) F3L01_07620 PF09547 Stage IV sporulation protein A (spore_IV_A) F3L01_07625 PF00216 Bacterial DNA-binding protein F3L01_07630 PF01227 GTP cyclohydrolase I F3L01_07635 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 F3L01_07640 PF01209 ubiE/COQ5 methyltransferase family F3L01_07645 PF00348 Polyprenyl synthetase F3L01_07650 PF00334 Nucleoside diphosphate kinase F3L01_07655 PF01264 Chorismate synthase F3L01_07660 PF01761 3-dehydroquinate synthase F3L01_07665 PF00155 Aminotransferase class I and II F3L01_07675 PF08858 IDEAL domain F3L01_07675 PF08864 UPF0302 domain F3L01_07680 PF10673 Protein of unknown function (DUF2487) F3L01_07685 PF00355 Rieske [2Fe-2S] domain F3L01_07690 PF00033 Cytochrome b/b6/petB F3L01_07695 PF13442 Cytochrome C oxidase, cbb3-type, subunit III F3L01_07695 PF00032 Cytochrome b(C-terminal)/b6/petD F3L01_07700 PF07187 Protein of unknown function (DUF1405) F3L01_07710 PF09577 Sporulation protein YpjB (SpoYpjB) F3L01_07715 PF04298 Putative neutral zinc metallopeptidase F3L01_07725 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) F3L01_07725 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 F3L01_07735 PF03819 MazG nucleotide pyrophosphohydrolase domain F3L01_07740 PF05173 Dihydrodipicolinate reductase, C-terminus F3L01_07740 PF01113 Dihydrodipicolinate reductase, N-terminus F3L01_07745 PF02142 MGS-like domain F3L01_07750 PF02585 GlcNAc-PI de-N-acetylase F3L01_07755 PF00534 Glycosyl transferases group 1 F3L01_07755 PF13439 Glycosyltransferase Family 4 F3L01_07760 PF12627 Probable RNA and SrmB- binding site of polymerase A F3L01_07760 PF13735 tRNA nucleotidyltransferase domain 2 putative F3L01_07760 PF01743 Poly A polymerase head domain F3L01_07765 PF02237 Biotin protein ligase C terminal domain F3L01_07765 PF03099 Biotin/lipoate A/B protein ligase family F3L01_07765 PF08279 HTH domain F3L01_07775 PF02548 Ketopantoate hydroxymethyltransferase F3L01_07780 PF02569 Pantoate-beta-alanine ligase F3L01_07785 PF02261 Aspartate decarboxylase F3L01_07790 PF00929 Exonuclease F3L01_07790 PF04851 Type III restriction enzyme, res subunit F3L01_07790 PF13307 Helicase C-terminal domain F3L01_07795 PF14084 Protein of unknown function (DUF4264) F3L01_07805 PF00155 Aminotransferase class I and II F3L01_07810 PF07261 Replication initiation and membrane attachment F3L01_07815 PF10576 Iron-sulfur binding domain of endonuclease III F3L01_07815 PF00730 HhH-GPD superfamily base excision DNA repair protein F3L01_07815 PF00633 Helix-hairpin-helix motif F3L01_07825 PF00905 Penicillin binding protein transpeptidase domain F3L01_07825 PF00912 Transglycosylase F3L01_07830 PF03838 Recombination protein U F3L01_07835 PF10720 Protein of unknown function (DUF2515) F3L01_07865 PF06908 YspA SLOG family F3L01_07870 PF05103 DivIVA protein F3L01_07880 PF01170 Putative RNA methylase family UPF0020 F3L01_07880 PF02926 THUMP domain F3L01_07900 PF18801 response regulator aspartate phosphatase H, N terminal F3L01_07920 PF13307 Helicase C-terminal domain F3L01_07925 PF02074 Carboxypeptidase Taq (M32) metallopeptidase F3L01_07935 PF00557 Metallopeptidase family M24 F3L01_07945 PF00156 Phosphoribosyl transferase domain F3L01_07950 PF00860 Permease family F3L01_07955 PF04235 Protein of unknown function (DUF418) F3L01_07960 PF00350 Dynamin family F3L01_07970 PF00583 Acetyltransferase (GNAT) family F3L01_07975 PF10752 Protein of unknown function (DUF2533) F3L01_07980 PF00581 Rhodanese-like domain F3L01_08015 PF00689 Cation transporting ATPase, C-terminus F3L01_08015 PF00690 Cation transporter/ATPase, N-terminus F3L01_08020 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain F3L01_08020 PF01367 5'-3' exonuclease, C-terminal SAM fold F3L01_08035 PF02706 Chain length determinant protein F3L01_08035 PF13807 G-rich domain on putative tyrosine kinase F3L01_08045 PF02397 Bacterial sugar transferase F3L01_08060 PF00535 Glycosyl transferase family 2 F3L01_08065 PF13439 Glycosyltransferase Family 4 F3L01_08065 PF00534 Glycosyl transferases group 1 F3L01_08080 PF18014 Acetyltransferase (GNAT) domain F3L01_08080 PF13673 Acetyltransferase (GNAT) domain F3L01_08100 PF13456 Reverse transcriptase-like F3L01_08105 PF01263 Aldose 1-epimerase F3L01_08130 PF00313 'Cold-shock' DNA-binding domain F3L01_08135 PF08892 YqcI/YcgG family F3L01_08140 PF01810 LysE type translocator F3L01_08160 PF00474 Sodium:solute symporter family F3L01_08165 PF00202 Aminotransferase class-III F3L01_08175 PF00999 Sodium/hydrogen exchanger family F3L01_08180 PF17770 Ribonuclease J C-terminal domain F3L01_08180 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain F3L01_08180 PF00753 Metallo-beta-lactamase superfamily F3L01_08185 PF06445 GyrI-like small molecule binding domain F3L01_08185 PF13411 MerR HTH family regulatory protein F3L01_08195 PF04239 Protein of unknown function (DUF421) F3L01_08200 PF02698 DUF218 domain F3L01_08210 PF00881 Nitroreductase family F3L01_08235 PF17209 Hfq protein F3L01_08245 PF01618 MotA/TolQ/ExbB proton channel family F3L01_08250 PF00691 OmpA family F3L01_08250 PF13677 Membrane MotB of proton-channel complex MotA/MotB F3L01_08255 PF00072 Response regulator receiver domain F3L01_08260 PF02895 Signal transducing histidine kinase, homodimeric domain F3L01_08260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3L01_08260 PF01627 Hpt domain F3L01_08260 PF07194 P2 response regulator binding domain F3L01_08260 PF01584 CheW-like domain F3L01_08265 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term F3L01_08265 PF04509 CheC-like family F3L01_08280 PF01739 CheR methyltransferase, SAM binding domain F3L01_08280 PF03705 CheR methyltransferase, all-alpha domain F3L01_08300 PF00460 Flagella basal body rod protein F3L01_08300 PF06429 Flagellar basal body rod FlgEFG protein C-terminal F3L01_08305 PF00669 Bacterial flagellin N-terminal helical region F3L01_08305 PF00700 Bacterial flagellin C-terminal helical region F3L01_08310 PF07195 Flagellar hook-associated protein 2 C-terminus F3L01_08310 PF02465 Flagellar hook-associated protein 2 N-terminus F3L01_08325 PF00460 Flagella basal body rod protein F3L01_08330 PF06429 Flagellar basal body rod FlgEFG protein C-terminal F3L01_08330 PF00460 Flagella basal body rod protein F3L01_08335 PF02049 Flagellar hook-basal body complex protein FliE F3L01_08345 PF14842 FliG N-terminal domain F3L01_08345 PF14841 FliG middle domain F3L01_08345 PF01706 FliG C-terminal domain F3L01_08355 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain F3L01_08355 PF18269 T3SS EscN ATPase C-terminal domain F3L01_08355 PF02874 ATP synthase alpha/beta family, beta-barrel domain F3L01_08375 PF07559 Flagellar basal body protein FlaE F3L01_08375 PF00460 Flagella basal body rod protein F3L01_08375 PF06429 Flagellar basal body rod FlgEFG protein C-terminal F3L01_08390 PF00072 Response regulator receiver domain F3L01_08390 PF01584 CheW-like domain F3L01_08395 PF12181 DNA binding domain of the motility gene repressor (MogR) F3L01_08400 PF00669 Bacterial flagellin N-terminal helical region F3L01_08400 PF00700 Bacterial flagellin C-terminal helical region F3L01_08405 PF00669 Bacterial flagellin N-terminal helical region F3L01_08405 PF00700 Bacterial flagellin C-terminal helical region F3L01_08410 PF00669 Bacterial flagellin N-terminal helical region F3L01_08410 PF00700 Bacterial flagellin C-terminal helical region F3L01_08415 PF00700 Bacterial flagellin C-terminal helical region F3L01_08415 PF00669 Bacterial flagellin N-terminal helical region F3L01_08420 PF00700 Bacterial flagellin C-terminal helical region F3L01_08420 PF00669 Bacterial flagellin N-terminal helical region F3L01_08425 PF01464 Transglycosylase SLT domain F3L01_08435 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term F3L01_08435 PF02154 Flagellar motor switch protein FliM F3L01_08440 PF04509 CheC-like family F3L01_08440 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term F3L01_08450 PF00813 FliP family F3L01_08455 PF01313 Bacterial export proteins, family 3 F3L01_08465 PF01312 FlhB HrpN YscU SpaS Family F3L01_08470 PF00771 FHIPEP family F3L01_08475 PF00448 SRP54-type protein, GTPase domain F3L01_08480 PF06429 Flagellar basal body rod FlgEFG protein C-terminal F3L01_08480 PF00460 Flagella basal body rod protein F3L01_08485 PF01411 tRNA synthetases class II (A) F3L01_08485 PF02272 DHHA1 domain F3L01_08485 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain F3L01_08520 PF03992 Antibiotic biosynthesis monooxygenase F3L01_08525 PF08141 Small acid-soluble spore protein H family F3L01_08545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3L01_08545 PF03466 LysR substrate binding domain F3L01_08550 PF00005 ABC transporter F3L01_08550 PF08402 TOBE domain F3L01_08575 PF10787 Uncharacterised protein from bacillus cereus group F3L01_08595 PF00300 Histidine phosphatase superfamily (branch 1) F3L01_08605 PF00561 alpha/beta hydrolase fold F3L01_08615 PF01047 MarR family F3L01_08625 PF13537 Glutamine amidotransferase domain F3L01_08625 PF00733 Asparagine synthase F3L01_08645 PF01545 Cation efflux family F3L01_08645 PF16916 Dimerisation domain of Zinc Transporter F3L01_08655 PF00392 Bacterial regulatory proteins, gntR family F3L01_08655 PF07729 FCD domain F3L01_08670 PF07683 Cobalamin synthesis protein cobW C-terminal domain F3L01_08670 PF02492 CobW/HypB/UreG, nucleotide-binding domain F3L01_08675 PF03773 Predicted permease F3L01_08690 PF03553 Na+/H+ antiporter family F3L01_08695 PF13411 MerR HTH family regulatory protein F3L01_08705 PF00206 Lyase F3L01_08705 PF10415 Fumarase C C-terminus F3L01_08720 PF01554 MatE F3L01_08725 PF03575 Peptidase family S51 F3L01_08750 PF00578 AhpC/TSA family F3L01_08760 PF18801 response regulator aspartate phosphatase H, N terminal F3L01_08775 PF00291 Pyridoxal-phosphate dependent enzyme F3L01_08780 PF04286 Protein of unknown function (DUF445) F3L01_08810 PF00196 Bacterial regulatory proteins, luxR family F3L01_08810 PF00072 Response regulator receiver domain F3L01_08815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3L01_08815 PF13492 GAF domain F3L01_08815 PF07730 Histidine kinase F3L01_08815 PF13185 GAF domain F3L01_08820 PF00005 ABC transporter F3L01_08835 PF13091 PLD-like domain F3L01_08840 PF00696 Amino acid kinase family F3L01_08860 PF00375 Sodium:dicarboxylate symporter family F3L01_08865 PF10415 Fumarase C C-terminus F3L01_08865 PF00206 Lyase F3L01_08870 PF03949 Malic enzyme, NAD binding domain F3L01_08870 PF00390 Malic enzyme, N-terminal domain F3L01_08875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3L01_08880 PF08664 YcbB domain F3L01_08880 PF00072 Response regulator receiver domain F3L01_08885 PF04434 SWIM zinc finger F3L01_08885 PF00271 Helicase conserved C-terminal domain F3L01_08885 PF00176 SNF2 family N-terminal domain F3L01_08895 PF03590 Aspartate-ammonia ligase F3L01_08905 PF00696 Amino acid kinase family F3L01_08905 PF13840 ACT domain F3L01_08920 PF13761 Domain of unknown function (DUF4166) F3L01_08925 PF14158 YndJ-like protein F3L01_08930 PF09297 NADH pyrophosphatase zinc ribbon domain F3L01_08930 PF00293 NUDIX domain F3L01_08935 PF07690 Major Facilitator Superfamily F3L01_08945 PF03976 Polyphosphate kinase 2 (PPK2) F3L01_08950 PF03551 Transcriptional regulator PadR-like family F3L01_08950 PF10400 Virulence activator alpha C-term F3L01_08955 PF07690 Major Facilitator Superfamily F3L01_08965 PF07690 Major Facilitator Superfamily F3L01_08970 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal F3L01_08970 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III F3L01_08975 PF01926 50S ribosome-binding GTPase F3L01_08975 PF13167 GTP-binding GTPase N-terminal F3L01_08975 PF16360 GTP-binding GTPase Middle Region F3L01_08980 PF07690 Major Facilitator Superfamily F3L01_08985 PF00291 Pyridoxal-phosphate dependent enzyme F3L01_09005 PF00209 Sodium:neurotransmitter symporter family F3L01_09010 PF01522 Polysaccharide deacetylase F3L01_09010 PF00457 Glycosyl hydrolases family 11 F3L01_09010 PF03422 Carbohydrate binding module (family 6) F3L01_09020 PF04239 Protein of unknown function (DUF421) F3L01_09040 PF01625 Peptide methionine sulfoxide reductase F3L01_09050 PF01063 Amino-transferase class IV F3L01_09055 PF00205 Thiamine pyrophosphate enzyme, central domain F3L01_09055 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain F3L01_09055 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain F3L01_09065 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain F3L01_09065 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain F3L01_09070 PF00920 Dehydratase family F3L01_09075 PF00585 C-terminal regulatory domain of Threonine dehydratase F3L01_09075 PF00291 Pyridoxal-phosphate dependent enzyme F3L01_09085 PF09587 Bacterial capsule synthesis protein PGA_cap F3L01_09105 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase F3L01_09115 PF00072 Response regulator receiver domain F3L01_09115 PF04397 LytTr DNA-binding domain F3L01_09120 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain F3L01_09120 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain F3L01_09135 PF01979 Amidohydrolase family F3L01_09140 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F3L01_09165 PF13302 Acetyltransferase (GNAT) domain F3L01_09170 PF00072 Response regulator receiver domain F3L01_09170 PF00486 Transcriptional regulatory protein, C terminal F3L01_09175 PF00512 His Kinase A (phospho-acceptor) domain F3L01_09175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3L01_09190 PF01566 Natural resistance-associated macrophage protein F3L01_09205 PF02558 Ketopantoate reductase PanE/ApbA F3L01_09205 PF08546 Ketopantoate reductase PanE/ApbA C terminal F3L01_09210 PF13520 Amino acid permease F3L01_09220 PF05791 Bacillus haemolytic enterotoxin (HBL) F3L01_09225 PF05791 Bacillus haemolytic enterotoxin (HBL) F3L01_09235 PF01906 Putative heavy-metal-binding F3L01_09245 PF00440 Bacterial regulatory proteins, tetR family F3L01_09250 PF04198 Putative sugar-binding domain F3L01_09255 PF01791 DeoC/LacD family aldolase F3L01_09260 PF07662 Na+ dependent nucleoside transporter C-terminus F3L01_09260 PF01773 Na+ dependent nucleoside transporter N-terminus F3L01_09265 PF02885 Glycosyl transferase family, helical bundle domain F3L01_09265 PF00591 Glycosyl transferase family, a/b domain F3L01_09265 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain F3L01_09270 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region F3L01_09305 PF07301 Protein of unknown function (DUF1453) F3L01_09310 PF05979 Bacterial protein of unknown function (DUF896) F3L01_09315 PF05195 Aminopeptidase P, N-terminal domain F3L01_09315 PF00557 Metallopeptidase family M24 F3L01_09325 PF07732 Multicopper oxidase F3L01_09325 PF07731 Multicopper oxidase F3L01_09325 PF00394 Multicopper oxidase F3L01_09355 PF02525 Flavodoxin-like fold F3L01_09360 PF05525 Branched-chain amino acid transport protein F3L01_09365 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily F3L01_09370 PF05425 Copper resistance protein D F3L01_09370 PF13115 YtkA-like F3L01_09370 PF04234 CopC domain F3L01_09375 PF07987 Domain of unkown function (DUF1775) F3L01_09380 PF00892 EamA-like transporter family F3L01_09385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3L01_09385 PF03466 LysR substrate binding domain F3L01_09390 PF02082 Transcriptional regulator F3L01_09395 PF01323 DSBA-like thioredoxin domain F3L01_09400 PF00881 Nitroreductase family F3L01_09405 PF01425 Amidase F3L01_09410 PF01594 AI-2E family transporter F3L01_09415 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain F3L01_09415 PF00056 lactate/malate dehydrogenase, NAD binding domain F3L01_09420 PF01593 Flavin containing amine oxidoreductase F3L01_09430 PF07683 Cobalamin synthesis protein cobW C-terminal domain F3L01_09430 PF02492 CobW/HypB/UreG, nucleotide-binding domain F3L01_09440 PF12399 Branched-chain amino acid ATP-binding cassette transporter F3L01_09440 PF00005 ABC transporter F3L01_09445 PF00005 ABC transporter F3L01_09450 PF02653 Branched-chain amino acid transport system / permease component F3L01_09460 PF03466 LysR substrate binding domain F3L01_09460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3L01_09480 PF01047 MarR family F3L01_09490 PF01654 Cytochrome bd terminal oxidase subunit I F3L01_09495 PF02322 Cytochrome bd terminal oxidase subunit II F3L01_09500 PF00005 ABC transporter F3L01_09500 PF00664 ABC transporter transmembrane region F3L01_09505 PF00005 ABC transporter F3L01_09505 PF00664 ABC transporter transmembrane region F3L01_09515 PF00535 Glycosyl transferase family 2 F3L01_09520 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family F3L01_09525 PF00132 Bacterial transferase hexapeptide (six repeats) F3L01_09550 PF02016 LD-carboxypeptidase N-terminal domain F3L01_09550 PF17676 LD-carboxypeptidase C-terminal domain F3L01_09555 PF00768 D-alanyl-D-alanine carboxypeptidase F3L01_09555 PF07943 Penicillin-binding protein 5, C-terminal domain F3L01_09570 PF01476 LysM domain F3L01_09570 PF00877 NlpC/P60 family F3L01_09580 PF00664 ABC transporter transmembrane region F3L01_09580 PF00005 ABC transporter F3L01_09585 PF00072 Response regulator receiver domain F3L01_09585 PF00486 Transcriptional regulatory protein, C terminal F3L01_09590 PF00512 His Kinase A (phospho-acceptor) domain F3L01_09590 PF16736 Single Cache-like F3L01_09590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3L01_09590 PF00989 PAS fold F3L01_09600 PF00106 short chain dehydrogenase F3L01_09605 PF04439 Streptomycin adenylyltransferase F3L01_09610 PF01522 Polysaccharide deacetylase F3L01_09630 PF01842 ACT domain F3L01_09630 PF00742 Homoserine dehydrogenase F3L01_09630 PF03447 Homoserine dehydrogenase, NAD binding domain F3L01_09635 PF00291 Pyridoxal-phosphate dependent enzyme F3L01_09640 PF00288 GHMP kinases N terminal domain F3L01_09640 PF08544 GHMP kinases C terminal F3L01_09655 PF03816 Cell envelope-related transcriptional attenuator domain F3L01_09665 PF00486 Transcriptional regulatory protein, C terminal F3L01_09665 PF00072 Response regulator receiver domain F3L01_09670 PF16736 Single Cache-like F3L01_09670 PF00512 His Kinase A (phospho-acceptor) domain F3L01_09670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3L01_09670 PF00989 PAS fold F3L01_09675 PF01522 Polysaccharide deacetylase F3L01_09685 PF02308 MgtC family F3L01_09690 PF00583 Acetyltransferase (GNAT) family F3L01_09695 PF06276 Ferric iron reductase FhuF-like transporter F3L01_09695 PF04183 IucA / IucC family F3L01_09700 PF06276 Ferric iron reductase FhuF-like transporter F3L01_09700 PF04183 IucA / IucC family F3L01_09705 PF13193 AMP-binding enzyme C-terminal domain F3L01_09705 PF00501 AMP-binding enzyme F3L01_09720 PF01261 Xylose isomerase-like TIM barrel F3L01_09725 PF00269 Small, acid-soluble spore proteins, alpha/beta type F3L01_09730 PF07690 Major Facilitator Superfamily F3L01_09735 PF01810 LysE type translocator F3L01_09740 PF00155 Aminotransferase class I and II F3L01_09740 PF00392 Bacterial regulatory proteins, gntR family F3L01_09750 PF01734 Patatin-like phospholipase F3L01_09775 PF00293 NUDIX domain F3L01_09775 PF13344 Haloacid dehalogenase-like hydrolase F3L01_09780 PF02540 NAD synthase F3L01_09785 PF02687 FtsX-like permease family F3L01_09790 PF18277 AbrB C-terminal domain F3L01_09790 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin F3L01_09795 PF00082 Subtilase family F3L01_09800 PF01022 Bacterial regulatory protein, arsR family F3L01_09805 PF00248 Aldo/keto reductase family F3L01_09810 PF07690 Major Facilitator Superfamily F3L01_09820 PF05656 Protein of unknown function (DUF805) F3L01_09845 PF00672 HAMP domain F3L01_09845 PF02743 Cache domain F3L01_09845 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F3L01_09865 PF00210 Ferritin-like domain F3L01_09880 PF00296 Luciferase-like monooxygenase F3L01_09890 PF01593 Flavin containing amine oxidoreductase F3L01_09895 PF13302 Acetyltransferase (GNAT) domain F3L01_09900 PF00248 Aldo/keto reductase family F3L01_09905 PF02492 CobW/HypB/UreG, nucleotide-binding domain F3L01_09905 PF07683 Cobalamin synthesis protein cobW C-terminal domain F3L01_09910 PF00583 Acetyltransferase (GNAT) family F3L01_09915 PF01297 Zinc-uptake complex component A periplasmic F3L01_09920 PF13460 NAD(P)H-binding F3L01_09925 PF00724 NADH:flavin oxidoreductase / NADH oxidase family F3L01_09930 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain F3L01_09930 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain F3L01_09940 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F3L01_09945 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily F3L01_09955 PF00300 Histidine phosphatase superfamily (branch 1) F3L01_09970 PF00293 NUDIX domain F3L01_09975 PF09335 SNARE associated Golgi protein F3L01_09990 PF03773 Predicted permease F3L01_09995 PF09323 Domain of unknown function (DUF1980) F3L01_10010 PF13091 PLD-like domain F3L01_10010 PF13396 Phospholipase_D-nuclease N-terminal F3L01_10025 PF13460 NAD(P)H-binding F3L01_10030 PF04306 Protein of unknown function (DUF456) F3L01_10035 PF00571 CBS domain F3L01_10035 PF03471 Transporter associated domain F3L01_10035 PF01595 Cyclin M transmembrane N-terminal domain F3L01_10050 PF05525 Branched-chain amino acid transport protein F3L01_10055 PF01588 Putative tRNA binding domain F3L01_10075 PF07454 Stage II sporulation protein P (SpoIIP) F3L01_10085 PF02557 D-alanyl-D-alanine carboxypeptidase F3L01_10095 PF01425 Amidase F3L01_10100 PF07690 Major Facilitator Superfamily F3L01_10145 PF01758 Sodium Bile acid symporter family F3L01_10150 PF01022 Bacterial regulatory protein, arsR family F3L01_10155 PF01451 Low molecular weight phosphotyrosine protein phosphatase F3L01_10160 PF06953 Arsenical resistance operon trans-acting repressor ArsD F3L01_10165 PF02374 Anion-transporting ATPase F3L01_10205 PF07693 KAP family P-loop domain F3L01_10220 PF07454 Stage II sporulation protein P (SpoIIP) F3L01_10245 PF00842 Alanine racemase, C-terminal domain F3L01_10245 PF01168 Alanine racemase, N-terminal domain F3L01_10265 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase F3L01_10270 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) F3L01_10270 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 F3L01_10275 PF00392 Bacterial regulatory proteins, gntR family F3L01_10275 PF00155 Aminotransferase class I and II F3L01_10305 PF00583 Acetyltransferase (GNAT) family F3L01_10320 PF06013 Proteins of 100 residues with WXG F3L01_10335 PF08817 WXG100 protein secretion system (Wss), protein YukD F3L01_10340 PF10140 WXG100 protein secretion system (Wss), protein YukC F3L01_10420 PF09579 Sporulation protein YtfJ (Spore_YtfJ) F3L01_10445 PF01209 ubiE/COQ5 methyltransferase family F3L01_10450 PF01268 Formate--tetrahydrofolate ligase F3L01_10460 PF00271 Helicase conserved C-terminal domain F3L01_10460 PF00270 DEAD/DEAH box helicase F3L01_10465 PF01261 Xylose isomerase-like TIM barrel F3L01_10470 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily F3L01_10480 PF08240 Alcohol dehydrogenase GroES-like domain F3L01_10480 PF00107 Zinc-binding dehydrogenase F3L01_10485 PF08281 Sigma-70, region 4 F3L01_10485 PF04542 Sigma-70 region 2 F3L01_10495 PF03109 ABC1 family F3L01_10505 PF00258 Flavodoxin F3L01_10505 PF01613 Flavin reductase like domain F3L01_10515 PF00255 Glutathione peroxidase F3L01_10525 PF01882 Protein of unknown function DUF58 F3L01_10535 PF00384 Molybdopterin oxidoreductase F3L01_10535 PF01568 Molydopterin dinucleotide binding domain F3L01_10535 PF14710 Respiratory nitrate reductase alpha N-terminal F3L01_10540 PF14711 Respiratory nitrate reductase beta C-terminal F3L01_10540 PF13247 4Fe-4S dicluster domain F3L01_10545 PF02613 Nitrate reductase delta subunit F3L01_10550 PF02665 Nitrate reductase gamma subunit F3L01_10555 PF00325 Bacterial regulatory proteins, crp family F3L01_10555 PF00027 Cyclic nucleotide-binding domain F3L01_10560 PF04055 Radical SAM superfamily F3L01_10560 PF06463 Molybdenum Cofactor Synthesis C F3L01_10565 PF00899 ThiF family F3L01_10570 PF03453 MoeA N-terminal region (domain I and II) F3L01_10570 PF03454 MoeA C-terminal region (domain IV) F3L01_10570 PF00994 Probable molybdopterin binding domain F3L01_10575 PF02391 MoaE protein F3L01_10585 PF07690 Major Facilitator Superfamily F3L01_10615 PF01903 CbiX F3L01_10620 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases F3L01_10625 PF00355 Rieske [2Fe-2S] domain F3L01_10630 PF04324 BFD-like [2Fe-2S] binding domain F3L01_10630 PF01077 Nitrite and sulphite reductase 4Fe-4S domain F3L01_10630 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain F3L01_10630 PF18267 Rubredoxin NAD+ reductase C-terminal domain F3L01_10630 PF07992 Pyridine nucleotide-disulphide oxidoreductase F3L01_10635 PF01814 Hemerythrin HHE cation binding domain F3L01_10635 PF04405 Domain of Unknown function (DUF542) F3L01_10670 PF04232 Stage V sporulation protein S (SpoVS) F3L01_10695 PF18801 response regulator aspartate phosphatase H, N terminal F3L01_10695 PF17874 MalT-like TPR region F3L01_10710 PF01966 HD domain F3L01_10730 PF00436 Single-strand binding protein family F3L01_10750 PF04445 Putative SAM-dependent methyltransferase F3L01_10755 PF05746 DALR anticodon binding domain F3L01_10755 PF03485 Arginyl tRNA synthetase N terminal domain F3L01_10755 PF00750 tRNA synthetases class I (R) F3L01_10780 PF00133 tRNA synthetases class I (I, L, M and V) F3L01_10780 PF08264 Anticodon-binding domain of tRNA F3L01_10795 PF00152 tRNA synthetases class II (D, K and N) F3L01_10795 PF01336 OB-fold nucleic acid binding domain F3L01_10800 PF00209 Sodium:neurotransmitter symporter family F3L01_10815 PF10997 Alternate to MurJ F3L01_10820 PF13419 Haloacid dehalogenase-like hydrolase F3L01_10830 PF00465 Iron-containing alcohol dehydrogenase F3L01_10835 PF01177 Asp/Glu/Hydantoin racemase F3L01_10845 PF00583 Acetyltransferase (GNAT) family F3L01_10850 PF11188 Protein of unknown function (DUF2975) F3L01_10855 PF13443 Cro/C1-type HTH DNA-binding domain F3L01_10860 PF08645 Polynucleotide kinase 3 phosphatase F3L01_10870 PF00005 ABC transporter F3L01_10875 PF05975 Bacterial ABC transporter protein EcsB F3L01_10880 PF14005 YpjP-like protein F3L01_10885 PF13419 Haloacid dehalogenase-like hydrolase F3L01_10900 PF00144 Beta-lactamase F3L01_10900 PF07930 D-aminopeptidase, domain B F3L01_10910 PF01348 Type II intron maturase F3L01_10910 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) F3L01_10920 PF00186 Dihydrofolate reductase F3L01_10925 PF00905 Penicillin binding protein transpeptidase domain F3L01_10925 PF03717 Penicillin-binding Protein dimerisation domain F3L01_10925 PF05223 NTF2-like N-terminal transpeptidase domain F3L01_10930 PF02525 Flavodoxin-like fold F3L01_10935 PF01553 Acyltransferase F3L01_10940 PF03006 Haemolysin-III related F3L01_10945 PF02416 mttA/Hcf106 family F3L01_10950 PF00902 Sec-independent protein translocase protein (TatC) F3L01_10960 PF02645 Uncharacterised protein, DegV family COG1307 F3L01_10970 PF02630 SCO1/SenC F3L01_10975 PF00011 Hsp20/alpha crystallin family F3L01_10980 PF00733 Asparagine synthase F3L01_10980 PF13537 Glutamine amidotransferase domain F3L01_11005 PF01063 Amino-transferase class IV F3L01_11010 PF00881 Nitroreductase family F3L01_11025 PF00857 Isochorismatase family F3L01_11035 PF00011 Hsp20/alpha crystallin family F3L01_11040 PF00924 Mechanosensitive ion channel F3L01_11045 PF07730 Histidine kinase F3L01_11045 PF13185 GAF domain F3L01_11055 PF01380 SIS domain F3L01_11055 PF01418 Helix-turn-helix domain, rpiR family F3L01_11090 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase F3L01_11090 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain F3L01_11110 PF03358 NADPH-dependent FMN reductase F3L01_11130 PF00528 Binding-protein-dependent transport system inner membrane component F3L01_11135 PF13520 Amino acid permease F3L01_11165 PF00571 CBS domain F3L01_11165 PF01595 Cyclin M transmembrane N-terminal domain F3L01_11165 PF03471 Transporter associated domain F3L01_11170 PF00171 Aldehyde dehydrogenase family F3L01_11175 PF07997 Protein of unknown function (DUF1694) F3L01_11180 PF09385 Histidine kinase N terminal F3L01_11190 PF00202 Aminotransferase class-III F3L01_11195 PF01144 Coenzyme A transferase F3L01_11200 PF01144 Coenzyme A transferase F3L01_11205 PF07687 Peptidase dimerisation domain F3L01_11205 PF01546 Peptidase family M20/M25/M40 F3L01_11210 PF00583 Acetyltransferase (GNAT) family F3L01_11215 PF02954 Bacterial regulatory protein, Fis family F3L01_11215 PF00158 Sigma-54 interaction domain F3L01_11215 PF13426 PAS domain F3L01_11220 PF12544 Lysine-2,3-aminomutase F3L01_11225 PF14122 YokU-like protein, putative antitoxin F3L01_11230 PF06855 YozE SAM-like fold F3L01_11245 PF14162 YozD-like protein F3L01_11255 PF08239 Bacterial SH3 domain F3L01_11255 PF00069 Protein kinase domain F3L01_11265 PF01569 PAP2 superfamily F3L01_11270 PF01545 Cation efflux family F3L01_11270 PF16916 Dimerisation domain of Zinc Transporter F3L01_11275 PF00085 Thioredoxin F3L01_11350 PF10676 Spore germination protein gerPA/gerPF F3L01_11365 PF00106 short chain dehydrogenase F3L01_11385 PF00912 Transglycosylase F3L01_11385 PF00905 Penicillin binding protein transpeptidase domain F3L01_11395 PF07690 Major Facilitator Superfamily F3L01_11400 PF01521 Iron-sulphur cluster biosynthesis F3L01_11410 PF03972 MmgE/PrpD family F3L01_11420 PF02771 Acyl-CoA dehydrogenase, N-terminal domain F3L01_11420 PF00441 Acyl-CoA dehydrogenase, C-terminal domain F3L01_11420 PF02770 Acyl-CoA dehydrogenase, middle domain F3L01_11425 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase F3L01_11425 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase F3L01_11430 PF00171 Aldehyde dehydrogenase family F3L01_11435 PF01810 LysE type translocator F3L01_11440 PF00378 Enoyl-CoA hydratase/isomerase F3L01_11455 PF12320 Type 5 capsule protein repressor C-terminal domain F3L01_11455 PF00149 Calcineurin-like phosphoesterase F3L01_11460 PF13476 AAA domain F3L01_11465 PF01022 Bacterial regulatory protein, arsR family F3L01_11480 PF07690 Major Facilitator Superfamily F3L01_11490 PF00106 short chain dehydrogenase F3L01_11495 PF00425 chorismate binding enzyme F3L01_11500 PF13193 AMP-binding enzyme C-terminal domain F3L01_11500 PF00501 AMP-binding enzyme F3L01_11505 PF00550 Phosphopantetheine attachment site F3L01_11505 PF00857 Isochorismatase family F3L01_11510 PF00501 AMP-binding enzyme F3L01_11510 PF13193 AMP-binding enzyme C-terminal domain F3L01_11510 PF00668 Condensation domain F3L01_11510 PF00975 Thioesterase domain F3L01_11510 PF00550 Phosphopantetheine attachment site F3L01_11515 PF03621 MbtH-like protein F3L01_11520 PF07690 Major Facilitator Superfamily F3L01_11535 PF00216 Bacterial DNA-binding protein F3L01_11545 PF05163 DinB family F3L01_11550 PF00082 Subtilase family F3L01_11555 PF01235 Sodium:alanine symporter family F3L01_11575 PF00849 RNA pseudouridylate synthase F3L01_11575 PF01479 S4 domain F3L01_11585 PF00005 ABC transporter F3L01_11610 PF00205 Thiamine pyrophosphate enzyme, central domain F3L01_11610 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain F3L01_11610 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain F3L01_11660 PF00561 alpha/beta hydrolase fold F3L01_11670 PF16123 Hydroxyacylglutathione hydrolase C-terminus F3L01_11670 PF00753 Metallo-beta-lactamase superfamily F3L01_11680 PF03176 MMPL family F3L01_11750 PF13302 Acetyltransferase (GNAT) domain F3L01_11760 PF00313 'Cold-shock' DNA-binding domain F3L01_11810 PF03475 3-alpha domain F3L01_11810 PF03473 MOSC domain F3L01_11830 PF00664 ABC transporter transmembrane region F3L01_11830 PF00005 ABC transporter F3L01_11860 PF01810 LysE type translocator F3L01_11865 PF07883 Cupin domain F3L01_11865 PF01381 Helix-turn-helix F3L01_11895 PF07992 Pyridine nucleotide-disulphide oxidoreductase F3L01_11895 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain F3L01_11900 PF08281 Sigma-70, region 4 F3L01_11900 PF04542 Sigma-70 region 2 F3L01_11900 PF12680 SnoaL-like domain F3L01_11920 PF02638 Glycosyl hydrolase-like 10 F3L01_11930 PF02378 Phosphotransferase system, EIIC F3L01_11940 PF03702 Anhydro-N-acetylmuramic acid kinase F3L01_11945 PF01869 BadF/BadG/BcrA/BcrD ATPase family F3L01_11950 PF02660 Glycerol-3-phosphate acyltransferase F3L01_11955 PF00266 Aminotransferase class-V F3L01_11960 PF00291 Pyridoxal-phosphate dependent enzyme F3L01_11965 PF01047 MarR family F3L01_11970 PF07690 Major Facilitator Superfamily F3L01_11985 PF16123 Hydroxyacylglutathione hydrolase C-terminus F3L01_11985 PF00753 Metallo-beta-lactamase superfamily F3L01_11995 PF00271 Helicase conserved C-terminal domain F3L01_11995 PF00270 DEAD/DEAH box helicase F3L01_12005 PF00440 Bacterial regulatory proteins, tetR family F3L01_12005 PF17932 Tetracyclin repressor-like, C-terminal domain F3L01_12070 PF00589 Phage integrase family F3L01_12080 PF09680 Family of unknown function F3L01_12085 PF09680 Family of unknown function F3L01_12125 PF09313 Domain of unknown function (DUF1971) F3L01_12125 PF03848 Tellurite resistance protein TehB F3L01_12135 PF08241 Methyltransferase domain F3L01_12140 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain F3L01_12140 PF00205 Thiamine pyrophosphate enzyme, central domain F3L01_12140 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain F3L01_12145 PF01047 MarR family F3L01_12150 PF00300 Histidine phosphatase superfamily (branch 1) F3L01_12155 PF14171 Toxin SpoIISA, type II toxin-antitoxin system F3L01_12175 PF01546 Peptidase family M20/M25/M40 F3L01_12175 PF07687 Peptidase dimerisation domain F3L01_12190 PF00072 Response regulator receiver domain F3L01_12190 PF00196 Bacterial regulatory proteins, luxR family F3L01_12200 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin F3L01_12200 PF18277 AbrB C-terminal domain F3L01_12215 PF01925 Sulfite exporter TauE/SafE F3L01_12220 PF00132 Bacterial transferase hexapeptide (six repeats) F3L01_12225 PF00768 D-alanyl-D-alanine carboxypeptidase F3L01_12225 PF07943 Penicillin-binding protein 5, C-terminal domain F3L01_12240 PF07690 Major Facilitator Superfamily F3L01_12250 PF00501 AMP-binding enzyme F3L01_12250 PF13193 AMP-binding enzyme C-terminal domain F3L01_12250 PF07993 Male sterility protein F3L01_12250 PF00550 Phosphopantetheine attachment site F3L01_12250 PF00668 Condensation domain F3L01_12255 PF00668 Condensation domain F3L01_12255 PF00550 Phosphopantetheine attachment site F3L01_12255 PF00501 AMP-binding enzyme F3L01_12255 PF13193 AMP-binding enzyme C-terminal domain F3L01_12260 PF01648 4'-phosphopantetheinyl transferase superfamily F3L01_12265 PF00975 Thioesterase domain F3L01_12275 PF05139 Erythromycin esterase F3L01_12285 PF13302 Acetyltransferase (GNAT) domain F3L01_12295 PF00395 S-layer homology domain F3L01_12295 PF01520 N-acetylmuramoyl-L-alanine amidase F3L01_12330 PF01734 Patatin-like phospholipase F3L01_12330 PF00027 Cyclic nucleotide-binding domain F3L01_12350 PF18665 Tetracyclin repressor-like, C-terminal domain F3L01_12350 PF00440 Bacterial regulatory proteins, tetR family F3L01_12355 PF18496 Collagenase G catalytic helper subdomain F3L01_12355 PF01752 Collagenase F3L01_12355 PF08453 Peptidase family M9 N-terminal F3L01_12375 PF02687 FtsX-like permease family F3L01_12380 PF00005 ABC transporter F3L01_12385 PF00144 Beta-lactamase F3L01_12415 PF00905 Penicillin binding protein transpeptidase domain F3L01_12415 PF03717 Penicillin-binding Protein dimerisation domain F3L01_12430 PF00149 Calcineurin-like phosphoesterase F3L01_12440 PF00005 ABC transporter F3L01_12450 PF08359 YsiA-like protein, C-terminal region F3L01_12450 PF00440 Bacterial regulatory proteins, tetR family F3L01_12465 PF00441 Acyl-CoA dehydrogenase, C-terminal domain F3L01_12465 PF02770 Acyl-CoA dehydrogenase, middle domain F3L01_12465 PF02771 Acyl-CoA dehydrogenase, N-terminal domain F3L01_12470 PF02785 Biotin carboxylase C-terminal domain F3L01_12470 PF00289 Biotin carboxylase, N-terminal domain F3L01_12470 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain F3L01_12475 PF00364 Biotin-requiring enzyme F3L01_12480 PF00682 HMGL-like F3L01_12485 PF00378 Enoyl-CoA hydratase/isomerase F3L01_12490 PF01039 Carboxyl transferase domain F3L01_12495 PF16177 Acetyl-coenzyme A synthetase N-terminus F3L01_12495 PF00501 AMP-binding enzyme F3L01_12495 PF13193 AMP-binding enzyme C-terminal domain F3L01_12540 PF00768 D-alanyl-D-alanine carboxypeptidase F3L01_12540 PF07943 Penicillin-binding protein 5, C-terminal domain F3L01_12545 PF00512 His Kinase A (phospho-acceptor) domain F3L01_12545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3L01_12550 PF00486 Transcriptional regulatory protein, C terminal F3L01_12550 PF00072 Response regulator receiver domain F3L01_12555 PF01966 HD domain F3L01_12565 PF01048 Phosphorylase superfamily F3L01_12585 PF17853 GGDEF-like domain F3L01_12585 PF12833 Helix-turn-helix domain F3L01_12615 PF17760 UvrA interaction domain F3L01_12615 PF17755 UvrA DNA-binding domain F3L01_12615 PF00005 ABC transporter F3L01_12635 PF09278 MerR, DNA binding F3L01_12635 PF00376 MerR family regulatory protein F3L01_12645 PF14552 Tautomerase enzyme F3L01_12650 PF03466 LysR substrate binding domain F3L01_12650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3L01_12675 PF00155 Aminotransferase class I and II F3L01_12675 PF00392 Bacterial regulatory proteins, gntR family F3L01_12685 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal F3L01_12685 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal F3L01_12700 PF08240 Alcohol dehydrogenase GroES-like domain F3L01_12700 PF00107 Zinc-binding dehydrogenase F3L01_12710 PF04239 Protein of unknown function (DUF421) F3L01_12725 PF08450 SMP-30/Gluconolactonase/LRE-like region F3L01_12735 PF01921 tRNA synthetases class I (K) F3L01_12740 PF07486 Cell Wall Hydrolase F3L01_12745 PF00561 alpha/beta hydrolase fold F3L01_12755 PF00486 Transcriptional regulatory protein, C terminal F3L01_12755 PF00072 Response regulator receiver domain F3L01_12760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3L01_12780 PF00005 ABC transporter F3L01_12785 PF02687 FtsX-like permease family F3L01_12805 PF03447 Homoserine dehydrogenase, NAD binding domain F3L01_12805 PF00742 Homoserine dehydrogenase F3L01_12805 PF01842 ACT domain F3L01_12810 PF00392 Bacterial regulatory proteins, gntR family F3L01_12810 PF00155 Aminotransferase class I and II F3L01_12815 PF01820 D-ala D-ala ligase N-terminus F3L01_12815 PF07478 D-ala D-ala ligase C-terminus F3L01_12820 PF03070 TENA/THI-4/PQQC family F3L01_12880 PF00067 Cytochrome P450 F3L01_12895 PF00132 Bacterial transferase hexapeptide (six repeats) F3L01_12900 PF07561 Domain of Unknown Function (DUF1540) F3L01_12910 PF00067 Cytochrome P450 F3L01_12925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3L01_12925 PF00512 His Kinase A (phospho-acceptor) domain F3L01_12925 PF00989 PAS fold F3L01_12925 PF13188 PAS domain F3L01_12925 PF13426 PAS domain F3L01_12940 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase F3L01_12945 PF01177 Asp/Glu/Hydantoin racemase F3L01_12950 PF07155 ECF-type riboflavin transporter, S component F3L01_12955 PF00589 Phage integrase family F3L01_12955 PF02899 Phage integrase, N-terminal SAM-like domain F3L01_12975 PF00551 Formyl transferase F3L01_12975 PF02911 Formyl transferase, C-terminal domain F3L01_12990 PF12833 Helix-turn-helix domain F3L01_12990 PF06445 GyrI-like small molecule binding domain F3L01_13025 PF05504 Spore germination B3/ GerAC like, C-terminal F3L01_13040 PF00857 Isochorismatase family F3L01_13060 PF01609 Transposase DDE domain F3L01_13065 PF13419 Haloacid dehalogenase-like hydrolase F3L01_13075 PF13302 Acetyltransferase (GNAT) domain F3L01_13075 PF03352 Methyladenine glycosylase F3L01_13075 PF00958 GMP synthase C terminal domain F3L01_13075 PF00117 Glutamine amidotransferase class-I F3L01_13075 PF13673 Acetyltransferase (GNAT) domain F3L01_13120 PF12558 ATP-binding cassette cobalt transporter F3L01_13120 PF00005 ABC transporter F3L01_13135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3L01_13135 PF00512 His Kinase A (phospho-acceptor) domain F3L01_13150 PF08240 Alcohol dehydrogenase GroES-like domain F3L01_13150 PF00107 Zinc-binding dehydrogenase F3L01_13155 PF01569 PAP2 superfamily F3L01_13210 PF07690 Major Facilitator Superfamily F3L01_13225 PF03009 Glycerophosphoryl diester phosphodiesterase family F3L01_13245 PF00155 Aminotransferase class I and II F3L01_13245 PF00392 Bacterial regulatory proteins, gntR family F3L01_13250 PF00892 EamA-like transporter family F3L01_13255 PF01270 Glycosyl hydrolases family 8 F3L01_13260 PF01156 Inosine-uridine preferring nucleoside hydrolase F3L01_13275 PF13344 Haloacid dehalogenase-like hydrolase F3L01_13275 PF00293 NUDIX domain F3L01_13290 PF07690 Major Facilitator Superfamily F3L01_13305 PF09297 NADH pyrophosphatase zinc ribbon domain F3L01_13305 PF00293 NUDIX domain F3L01_13310 PF00712 DNA polymerase III beta subunit, N-terminal domain F3L01_13310 PF02767 DNA polymerase III beta subunit, central domain F3L01_13310 PF02768 DNA polymerase III beta subunit, C-terminal domain F3L01_13320 PF12706 Beta-lactamase superfamily domain F3L01_13330 PF01042 Endoribonuclease L-PSP F3L01_13335 PF09234 Domain of unknown function (DUF1963) F3L01_13355 PF01734 Patatin-like phospholipase F3L01_13360 PF08000 Bacterial PH domain F3L01_13370 PF12867 DinB superfamily F3L01_13385 PF02673 Bacitracin resistance protein BacA F3L01_13395 PF01541 GIY-YIG catalytic domain F3L01_13425 PF00005 ABC transporter F3L01_13445 PF01266 FAD dependent oxidoreductase F3L01_13480 PF13419 Haloacid dehalogenase-like hydrolase F3L01_13500 PF03714 Bacterial pullanase-associated domain F3L01_13500 PF00128 Alpha amylase, catalytic domain F3L01_13500 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) F3L01_13505 PF03413 Peptidase propeptide and YPEB domain F3L01_13505 PF01447 Thermolysin metallopeptidase, catalytic domain F3L01_13505 PF02868 Thermolysin metallopeptidase, alpha-helical domain F3L01_13505 PF07504 Fungalysin/Thermolysin Propeptide Motif F3L01_13510 PF00149 Calcineurin-like phosphoesterase F3L01_13510 PF02872 5'-nucleotidase, C-terminal domain F3L01_13525 PF00344 SecY translocase F3L01_13530 PF00892 EamA-like transporter family F3L01_13535 PF00392 Bacterial regulatory proteins, gntR family F3L01_13535 PF00155 Aminotransferase class I and II F3L01_13540 PF00561 alpha/beta hydrolase fold F3L01_13580 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) F3L01_13590 PF01471 Putative peptidoglycan binding domain F3L01_13590 PF07486 Cell Wall Hydrolase F3L01_13610 PF03301 Tryptophan 2,3-dioxygenase F3L01_13615 PF04199 Putative cyclase F3L01_13620 PF00266 Aminotransferase class-V F3L01_13625 PF08359 YsiA-like protein, C-terminal region F3L01_13625 PF00440 Bacterial regulatory proteins, tetR family F3L01_13630 PF00293 NUDIX domain F3L01_13630 PF13344 Haloacid dehalogenase-like hydrolase F3L01_13650 PF00158 Sigma-54 interaction domain F3L01_13650 PF02954 Bacterial regulatory protein, Fis family F3L01_13650 PF01590 GAF domain F3L01_13665 PF08220 DeoR-like helix-turn-helix domain F3L01_13665 PF00455 DeoR C terminal sensor domain F3L01_13680 PF02082 Transcriptional regulator F3L01_13695 PF07992 Pyridine nucleotide-disulphide oxidoreductase F3L01_13695 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain F3L01_13700 PF02817 e3 binding domain F3L01_13700 PF00364 Biotin-requiring enzyme F3L01_13700 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) F3L01_13710 PF00676 Dehydrogenase E1 component F3L01_13720 PF00106 short chain dehydrogenase F3L01_13725 PF13789 Domain of unknown function (DUF4181) F3L01_13750 PF00528 Binding-protein-dependent transport system inner membrane component F3L01_13755 PF00005 ABC transporter F3L01_13755 PF00571 CBS domain F3L01_13760 PF04069 Substrate binding domain of ABC-type glycine betaine transport system F3L01_13765 PF00574 Clp protease F3L01_13785 PF13673 Acetyltransferase (GNAT) domain F3L01_13790 PF18416 N-acetylglucosamine binding protein domain 2 F3L01_13790 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading F3L01_13795 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase F3L01_13800 PF03781 Sulfatase-modifying factor enzyme 1 F3L01_13815 PF10990 Protein of unknown function (DUF2809) F3L01_13820 PF08241 Methyltransferase domain F3L01_13825 PF04237 YjbR F3L01_13865 PF13538 UvrD-like helicase C-terminal domain F3L01_13895 PF00570 HRDC domain F3L01_13895 PF09382 RQC domain F3L01_13895 PF00270 DEAD/DEAH box helicase F3L01_13895 PF00271 Helicase conserved C-terminal domain F3L01_13895 PF16124 RecQ zinc-binding F3L01_13915 PF12123 N-acetylmuramoyl-l-alanine amidase F3L01_13915 PF01510 N-acetylmuramoyl-L-alanine amidase F3L01_13940 PF02833 DHHA2 domain F3L01_13940 PF01368 DHH family F3L01_13945 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading F3L01_13945 PF18416 N-acetylglucosamine binding protein domain 2 F3L01_13960 PF02627 Carboxymuconolactone decarboxylase family F3L01_13965 PF01235 Sodium:alanine symporter family F3L01_13975 PF00701 Dihydrodipicolinate synthetase family F3L01_13980 PF05544 Proline racemase F3L01_13985 PF05544 Proline racemase F3L01_13990 PF01266 FAD dependent oxidoreductase F3L01_13995 PF00158 Sigma-54 interaction domain F3L01_13995 PF02954 Bacterial regulatory protein, Fis family F3L01_13995 PF13188 PAS domain F3L01_14000 PF07992 Pyridine nucleotide-disulphide oxidoreductase F3L01_14000 PF04324 BFD-like [2Fe-2S] binding domain F3L01_14010 PF07992 Pyridine nucleotide-disulphide oxidoreductase F3L01_14010 PF04324 BFD-like [2Fe-2S] binding domain F3L01_14025 PF08876 Domain of unknown function (DUF1836) F3L01_14030 PF01966 HD domain F3L01_14035 PF09335 SNARE associated Golgi protein F3L01_14055 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F3L01_14060 PF00877 NlpC/P60 family F3L01_14060 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain F3L01_14065 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain F3L01_14065 PF13378 Enolase C-terminal domain-like F3L01_14080 PF00248 Aldo/keto reductase family F3L01_14085 PF01965 DJ-1/PfpI family F3L01_14115 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain F3L01_14115 PF02129 X-Pro dipeptidyl-peptidase (S15 family) F3L01_14125 PF00672 HAMP domain F3L01_14125 PF00512 His Kinase A (phospho-acceptor) domain F3L01_14125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3L01_14130 PF00486 Transcriptional regulatory protein, C terminal F3L01_14130 PF00072 Response regulator receiver domain F3L01_14155 PF13419 Haloacid dehalogenase-like hydrolase F3L01_14160 PF01048 Phosphorylase superfamily F3L01_14165 PF03808 Glycosyl transferase WecB/TagA/CpsF family F3L01_14175 PF02645 Uncharacterised protein, DegV family COG1307 F3L01_14180 PF07552 Spore Coat Protein X and V domain F3L01_14215 PF07690 Major Facilitator Superfamily F3L01_14225 PF04519 Polymer-forming cytoskeletal F3L01_14230 PF13171 Protein of unknown function (DUF4004) F3L01_14235 PF12793 Sugar transport-related sRNA regulator N-term F3L01_14235 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F3L01_14240 PF07690 Major Facilitator Superfamily F3L01_14260 PF04226 Transglycosylase associated protein F3L01_14275 PF08241 Methyltransferase domain F3L01_14310 PF00155 Aminotransferase class I and II F3L01_14315 PF07977 FabA-like domain F3L01_14320 PF03630 Fumble F3L01_14365 PF01594 AI-2E family transporter F3L01_14375 PF00296 Luciferase-like monooxygenase F3L01_14380 PF00528 Binding-protein-dependent transport system inner membrane component F3L01_14385 PF09084 NMT1/THI5 like F3L01_14390 PF00005 ABC transporter F3L01_14425 PF02522 Aminoglycoside 3-N-acetyltransferase F3L01_14435 PF13536 Putative multidrug resistance efflux transporter F3L01_14445 PF12867 DinB superfamily F3L01_14465 PF08713 DNA alkylation repair enzyme F3L01_14470 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily F3L01_14480 PF01522 Polysaccharide deacetylase F3L01_14490 PF03741 Integral membrane protein TerC family F3L01_14495 PF00884 Sulfatase F3L01_14500 PF12848 ABC transporter F3L01_14500 PF00005 ABC transporter F3L01_14545 PF00589 Phage integrase family F3L01_14575 PF02899 Phage integrase, N-terminal SAM-like domain F3L01_14575 PF00589 Phage integrase family F3L01_14585 PF03176 MMPL family F3L01_14590 PF00440 Bacterial regulatory proteins, tetR family F3L01_14590 PF16295 Tetracyclin repressor-like, C-terminal domain F3L01_14600 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) F3L01_14605 PF02153 Prephenate dehydrogenase F3L01_14605 PF01842 ACT domain F3L01_14610 PF00155 Aminotransferase class I and II F3L01_14615 PF01264 Chorismate synthase F3L01_14620 PF00793 DAHP synthetase I family F3L01_14620 PF01817 Chorismate mutase type II F3L01_14645 PF01636 Phosphotransferase enzyme family F3L01_14670 PF06725 3D domain F3L01_14670 PF01476 LysM domain F3L01_14680 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily F3L01_14685 PF08031 Berberine and berberine like F3L01_14685 PF01565 FAD binding domain F3L01_14705 PF06039 Malate:quinone oxidoreductase (Mqo) F3L01_14710 PF13407 Periplasmic binding protein domain F3L01_14715 PF02653 Branched-chain amino acid transport system / permease component F3L01_14720 PF02653 Branched-chain amino acid transport system / permease component F3L01_14725 PF00005 ABC transporter F3L01_14730 PF00325 Bacterial regulatory proteins, crp family F3L01_14730 PF04198 Putative sugar-binding domain F3L01_14735 PF00370 FGGY family of carbohydrate kinases, N-terminal domain F3L01_14735 PF02782 FGGY family of carbohydrate kinases, C-terminal domain F3L01_14745 PF01791 DeoC/LacD family aldolase F3L01_14760 PF03992 Antibiotic biosynthesis monooxygenase F3L01_14780 PF07662 Na+ dependent nucleoside transporter C-terminus F3L01_14780 PF01773 Na+ dependent nucleoside transporter N-terminus F3L01_14785 PF00171 Aldehyde dehydrogenase family F3L01_14790 PF01472 PUA domain F3L01_14790 PF00696 Amino acid kinase family F3L01_14795 PF03807 NADP oxidoreductase coenzyme F420-dependent F3L01_14795 PF14748 Pyrroline-5-carboxylate reductase dimerisation F3L01_14800 PF01546 Peptidase family M20/M25/M40 F3L01_14805 PF01614 Bacterial transcriptional regulator F3L01_14805 PF09339 IclR helix-turn-helix domain F3L01_14815 PF00324 Amino acid permease F3L01_14825 PF00487 Fatty acid desaturase F3L01_14835 PF04294 VanW like protein F3L01_14840 PF00245 Alkaline phosphatase F3L01_14845 PF11188 Protein of unknown function (DUF2975) F3L01_14850 PF13443 Cro/C1-type HTH DNA-binding domain F3L01_14870 PF13302 Acetyltransferase (GNAT) domain F3L01_14875 PF12681 Glyoxalase-like domain F3L01_14900 PF17863 AAA lid domain F3L01_14900 PF07726 ATPase family associated with various cellular activities (AAA) F3L01_14915 PF07690 Major Facilitator Superfamily F3L01_14925 PF00535 Glycosyl transferase family 2 F3L01_14940 PF00535 Glycosyl transferase family 2 F3L01_14960 PF00202 Aminotransferase class-III F3L01_14965 PF00199 Catalase F3L01_14965 PF06628 Catalase-related immune-responsive F3L01_14970 PF18496 Collagenase G catalytic helper subdomain F3L01_14970 PF01752 Collagenase F3L01_14970 PF04151 Bacterial pre-peptidase C-terminal domain F3L01_14970 PF08453 Peptidase family M9 N-terminal F3L01_14980 PF01979 Amidohydrolase family F3L01_14980 PF13382 Adenine deaminase C-terminal domain F3L01_15005 PF17863 AAA lid domain F3L01_15005 PF07726 ATPase family associated with various cellular activities (AAA) F3L01_15060 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family F3L01_15100 PF00881 Nitroreductase family F3L01_15105 PF01047 MarR family F3L01_15115 PF03764 Elongation factor G, domain IV F3L01_15115 PF14492 Elongation Factor G, domain II F3L01_15115 PF00679 Elongation factor G C-terminus F3L01_15115 PF00009 Elongation factor Tu GTP binding domain F3L01_15125 PF00293 NUDIX domain F3L01_15130 PF05406 WGR domain F3L01_15135 PF16363 GDP-mannose 4,6 dehydratase F3L01_15140 PF00005 ABC transporter F3L01_15165 PF12833 Helix-turn-helix domain F3L01_15170 PF00583 Acetyltransferase (GNAT) family F3L01_15185 PF00892 EamA-like transporter family F3L01_15190 PF00392 Bacterial regulatory proteins, gntR family F3L01_15190 PF00155 Aminotransferase class I and II F3L01_15195 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 F3L01_15200 PF13031 Protein of unknown function (DUF3892) F3L01_15205 PF00672 HAMP domain F3L01_15205 PF00512 His Kinase A (phospho-acceptor) domain F3L01_15210 PF00486 Transcriptional regulatory protein, C terminal F3L01_15210 PF00072 Response regulator receiver domain F3L01_15215 PF00561 alpha/beta hydrolase fold F3L01_15245 PF01925 Sulfite exporter TauE/SafE F3L01_15255 PF00324 Amino acid permease F3L01_15265 PF08713 DNA alkylation repair enzyme F3L01_15285 PF00293 NUDIX domain F3L01_15295 PF04989 Cephalosporin hydroxylase F3L01_15300 PF10502 Signal peptidase, peptidase S26 F3L01_15310 PF02146 Sir2 family F3L01_15315 PF01470 Pyroglutamyl peptidase F3L01_15335 PF03746 LamB/YcsF family F3L01_15340 PF02626 Carboxyltransferase domain, subdomain A and B F3L01_15345 PF02682 Carboxyltransferase domain, subdomain C and D F3L01_15350 PF01614 Bacterial transcriptional regulator F3L01_15350 PF09339 IclR helix-turn-helix domain F3L01_15355 PF10502 Signal peptidase, peptidase S26 F3L01_15360 PF03932 CutC family F3L01_15375 PF08028 Acyl-CoA dehydrogenase, C-terminal domain F3L01_15375 PF02770 Acyl-CoA dehydrogenase, middle domain F3L01_15375 PF02771 Acyl-CoA dehydrogenase, N-terminal domain F3L01_15405 PF10903 Protein of unknown function (DUF2691) F3L01_15410 PF02915 Rubrerythrin F3L01_15425 PF00440 Bacterial regulatory proteins, tetR family F3L01_15430 PF05547 Immune inhibitor A peptidase M6 F3L01_15435 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain F3L01_15435 PF00391 PEP-utilising enzyme, mobile domain F3L01_15440 PF00753 Metallo-beta-lactamase superfamily F3L01_15445 PF10710 Protein of unknown function (DUF2512) F3L01_15450 PF11553 Protein of unknown function (DUF3231) F3L01_15455 PF00269 Small, acid-soluble spore proteins, alpha/beta type F3L01_15460 PF08240 Alcohol dehydrogenase GroES-like domain F3L01_15460 PF13823 Alcohol dehydrogenase GroES-associated F3L01_15460 PF00107 Zinc-binding dehydrogenase F3L01_15470 PF10415 Fumarase C C-terminus F3L01_15470 PF00206 Lyase F3L01_15475 PF17763 Glutaminase/Asparaginase C-terminal domain F3L01_15475 PF00710 Asparaginase, N-terminal F3L01_15480 PF01381 Helix-turn-helix F3L01_15500 PF05504 Spore germination B3/ GerAC like, C-terminal F3L01_15505 PF03845 Spore germination protein F3L01_15510 PF03323 Bacillus/Clostridium GerA spore germination protein F3L01_15515 PF13426 PAS domain F3L01_15515 PF00989 PAS fold F3L01_15515 PF13188 PAS domain F3L01_15515 PF00512 His Kinase A (phospho-acceptor) domain F3L01_15515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3L01_15520 PF05791 Bacillus haemolytic enterotoxin (HBL) F3L01_15525 PF05791 Bacillus haemolytic enterotoxin (HBL) F3L01_15540 PF17853 GGDEF-like domain F3L01_15540 PF12833 Helix-turn-helix domain F3L01_15555 PF00269 Small, acid-soluble spore proteins, alpha/beta type F3L01_15565 PF13520 Amino acid permease F3L01_15570 PF03807 NADP oxidoreductase coenzyme F420-dependent F3L01_15570 PF14748 Pyrroline-5-carboxylate reductase dimerisation F3L01_15575 PF05504 Spore germination B3/ GerAC like, C-terminal F3L01_15580 PF03845 Spore germination protein F3L01_15585 PF03323 Bacillus/Clostridium GerA spore germination protein F3L01_15590 PF08664 YcbB domain F3L01_15590 PF00072 Response regulator receiver domain F3L01_15595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3L01_15630 PF00144 Beta-lactamase F3L01_15640 PF02872 5'-nucleotidase, C-terminal domain F3L01_15640 PF00149 Calcineurin-like phosphoesterase F3L01_15640 PF17936 Bacterial Ig domain F3L01_15650 PF00857 Isochorismatase family F3L01_15665 PF01979 Amidohydrolase family F3L01_15670 PF03466 LysR substrate binding domain F3L01_15670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3L01_15675 PF01047 MarR family F3L01_15680 PF01544 CorA-like Mg2+ transporter protein F3L01_15700 PF13026 Protein of unknown function (DUF3887) F3L01_15700 PF12146 Serine aminopeptidase, S33 F3L01_15720 PF03441 FAD binding domain of DNA photolyase F3L01_15720 PF00875 DNA photolyase F3L01_15740 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) F3L01_15745 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus F3L01_15745 PF00361 Proton-conducting membrane transporter F3L01_15750 PF10057 Uncharacterized conserved protein (DUF2294) F3L01_15755 PF01522 Polysaccharide deacetylase F3L01_15765 PF00583 Acetyltransferase (GNAT) family F3L01_15770 PF01040 UbiA prenyltransferase family F3L01_15795 PF12746 GNAT acetyltransferase F3L01_15800 PF01451 Low molecular weight phosphotyrosine protein phosphatase F3L01_15805 PF01758 Sodium Bile acid symporter family F3L01_15810 PF01022 Bacterial regulatory protein, arsR family F3L01_15820 PF01872 RibD C-terminal domain F3L01_15825 PF00550 Phosphopantetheine attachment site F3L01_15825 PF07993 Male sterility protein F3L01_15830 PF00440 Bacterial regulatory proteins, tetR family F3L01_15830 PF18665 Tetracyclin repressor-like, C-terminal domain F3L01_15840 PF01037 Lrp/AsnC ligand binding domain F3L01_15855 PF07282 Putative transposase DNA-binding domain F3L01_15855 PF01385 Probable transposase F3L01_15855 PF12323 Helix-turn-helix domain F3L01_15865 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily F3L01_15915 PF00144 Beta-lactamase F3L01_15920 PF00144 Beta-lactamase F3L01_15935 PF12802 MarR family F3L01_15975 PF00072 Response regulator receiver domain F3L01_15975 PF00196 Bacterial regulatory proteins, luxR family F3L01_15990 PF00667 FAD binding domain F3L01_15990 PF00258 Flavodoxin F3L01_15990 PF00175 Oxidoreductase NAD-binding domain F3L01_15990 PF00067 Cytochrome P450 F3L01_15995 PF07690 Major Facilitator Superfamily F3L01_16015 PF00291 Pyridoxal-phosphate dependent enzyme F3L01_16025 PF01139 tRNA-splicing ligase RtcB F3L01_16035 PF04072 Leucine carboxyl methyltransferase F3L01_16045 PF00005 ABC transporter F3L01_16050 PF02687 FtsX-like permease family F3L01_16070 PF00672 HAMP domain F3L01_16070 PF00512 His Kinase A (phospho-acceptor) domain F3L01_16070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3L01_16075 PF00072 Response regulator receiver domain F3L01_16075 PF00486 Transcriptional regulatory protein, C terminal F3L01_16080 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 F3L01_16080 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) F3L01_16110 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain F3L01_16110 PF01842 ACT domain F3L01_16110 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain F3L01_16115 PF00266 Aminotransferase class-V F3L01_16130 PF07883 Cupin domain F3L01_16140 PF01497 Periplasmic binding protein F3L01_16140 PF12833 Helix-turn-helix domain F3L01_16145 PF01804 Penicillin amidase F3L01_16160 PF01476 LysM domain F3L01_16160 PF01471 Putative peptidoglycan binding domain F3L01_16160 PF01510 N-acetylmuramoyl-L-alanine amidase F3L01_16315 PF04634 Protein of unknown function, DUF600 F3L01_16345 PF09346 SMI1 / KNR4 family (SUKH-1) F3L01_16380 PF02557 D-alanyl-D-alanine carboxypeptidase F3L01_16385 PF09587 Bacterial capsule synthesis protein PGA_cap F3L01_16390 PF14044 NETI protein F3L01_16395 PF07690 Major Facilitator Superfamily F3L01_16405 PF12697 Alpha/beta hydrolase family F3L01_16410 PF01047 MarR family F3L01_16415 PF07690 Major Facilitator Superfamily F3L01_16425 PF02667 Short chain fatty acid transporter F3L01_16435 PF02525 Flavodoxin-like fold F3L01_16465 PF00005 ABC transporter F3L01_16485 PF03737 Aldolase/RraA F3L01_16490 PF03606 C4-dicarboxylate anaerobic carrier F3L01_16495 PF04231 Endonuclease I F3L01_16520 PF04073 Aminoacyl-tRNA editing domain F3L01_16525 PF13393 Histidyl-tRNA synthetase F3L01_16525 PF03129 Anticodon binding domain F3L01_16540 PF01638 HxlR-like helix-turn-helix F3L01_16545 PF00881 Nitroreductase family F3L01_16555 PF00391 PEP-utilising enzyme, mobile domain F3L01_16555 PF00224 Pyruvate kinase, barrel domain F3L01_16555 PF02887 Pyruvate kinase, alpha/beta domain F3L01_16585 PF00005 ABC transporter F3L01_16615 PF13419 Haloacid dehalogenase-like hydrolase F3L01_16645 PF13344 Haloacid dehalogenase-like hydrolase F3L01_16645 PF00293 NUDIX domain F3L01_16650 PF00579 tRNA synthetases class I (W and Y) F3L01_16655 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase F3L01_16655 PF13288 DXP reductoisomerase C-terminal domain F3L01_16655 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain F3L01_16660 PF01594 AI-2E family transporter F3L01_16705 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) F3L01_16715 PF01595 Cyclin M transmembrane N-terminal domain F3L01_16715 PF03471 Transporter associated domain F3L01_16715 PF00571 CBS domain F3L01_16720 PF13411 MerR HTH family regulatory protein F3L01_16730 PF00483 Nucleotidyl transferase F3L01_16735 PF16363 GDP-mannose 4,6 dehydratase F3L01_16740 PF08484 C-methyltransferase C-terminal domain F3L01_16740 PF08421 Putative zinc binding domain F3L01_16745 PF01370 NAD dependent epimerase/dehydratase family F3L01_16760 PF00892 EamA-like transporter family F3L01_16770 PF00805 Pentapeptide repeats (8 copies) F3L01_16775 PF06906 Protein of unknown function (DUF1272) F3L01_16780 PF10282 Lactonase, 7-bladed beta-propeller F3L01_16785 PF02782 FGGY family of carbohydrate kinases, C-terminal domain F3L01_16785 PF00370 FGGY family of carbohydrate kinases, N-terminal domain F3L01_16795 PF00923 Transaldolase/Fructose-6-phosphate aldolase F3L01_16800 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase F3L01_16800 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain F3L01_16805 PF02780 Transketolase, C-terminal domain F3L01_16805 PF00456 Transketolase, thiamine diphosphate binding domain F3L01_16805 PF02779 Transketolase, pyrimidine binding domain F3L01_16810 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain F3L01_16810 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain F3L01_16815 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain F3L01_16815 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain F3L01_16820 PF08240 Alcohol dehydrogenase GroES-like domain F3L01_16820 PF00107 Zinc-binding dehydrogenase F3L01_16825 PF00296 Luciferase-like monooxygenase F3L01_16835 PF00698 Acyl transferase domain F3L01_16835 PF00109 Beta-ketoacyl synthase, N-terminal domain F3L01_16835 PF08659 KR domain F3L01_16835 PF00550 Phosphopantetheine attachment site F3L01_16835 PF02801 Beta-ketoacyl synthase, C-terminal domain F3L01_16835 PF08240 Alcohol dehydrogenase GroES-like domain F3L01_16835 PF00107 Zinc-binding dehydrogenase F3L01_16835 PF14765 Polyketide synthase dehydratase F3L01_16835 PF16197 Ketoacyl-synthetase C-terminal extension F3L01_16845 PF00106 short chain dehydrogenase F3L01_16850 PF01447 Thermolysin metallopeptidase, catalytic domain F3L01_16850 PF07504 Fungalysin/Thermolysin Propeptide Motif F3L01_16850 PF03413 Peptidase propeptide and YPEB domain F3L01_16850 PF02868 Thermolysin metallopeptidase, alpha-helical domain F3L01_16860 PF12729 Four helix bundle sensory module for signal transduction F3L01_16860 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F3L01_16860 PF00672 HAMP domain F3L01_16865 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) F3L01_16870 PF01872 RibD C-terminal domain F3L01_16870 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region F3L01_16875 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase F3L01_16875 PF00925 GTP cyclohydrolase II F3L01_16880 PF01638 HxlR-like helix-turn-helix F3L01_16895 PF00248 Aldo/keto reductase family F3L01_16900 PF07690 Major Facilitator Superfamily F3L01_16910 PF03928 Haem-degrading F3L01_16950 PF03960 ArsC family F3L01_16955 PF01638 HxlR-like helix-turn-helix F3L01_16960 PF07702 UTRA domain F3L01_16960 PF00392 Bacterial regulatory proteins, gntR family F3L01_16965 PF01408 Oxidoreductase family, NAD-binding Rossmann fold F3L01_16965 PF02894 Oxidoreductase family, C-terminal alpha/beta domain F3L01_16975 PF01638 HxlR-like helix-turn-helix F3L01_16980 PF01638 HxlR-like helix-turn-helix F3L01_16985 PF00248 Aldo/keto reductase family F3L01_17020 PF02567 Phenazine biosynthesis-like protein F3L01_17025 PF00501 AMP-binding enzyme F3L01_17025 PF13193 AMP-binding enzyme C-terminal domain F3L01_17030 PF02525 Flavodoxin-like fold F3L01_17035 PF01638 HxlR-like helix-turn-helix F3L01_17040 PF01022 Bacterial regulatory protein, arsR family F3L01_17055 PF01522 Polysaccharide deacetylase F3L01_17055 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain F3L01_17060 PF12791 Anti-sigma factor N-terminus F3L01_17065 PF04542 Sigma-70 region 2 F3L01_17070 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 F3L01_17070 PF00535 Glycosyl transferase family 2 F3L01_17075 PF01810 LysE type translocator F3L01_17110 PF01061 ABC-2 type transporter F3L01_17115 PF13732 Domain of unknown function (DUF4162) F3L01_17115 PF00005 ABC transporter F3L01_17135 PF03063 Prismane/CO dehydrogenase family F3L01_17140 PF00753 Metallo-beta-lactamase superfamily F3L01_17145 PF01183 Glycosyl hydrolases family 25 F3L01_17145 PF01471 Putative peptidoglycan binding domain F3L01_17205 PF00753 Metallo-beta-lactamase superfamily F3L01_17210 PF00324 Amino acid permease F3L01_17215 PF07690 Major Facilitator Superfamily F3L01_17245 PF02585 GlcNAc-PI de-N-acetylase F3L01_17250 PF08830 Protein of unknown function (DUF1806) F3L01_17255 PF03600 Citrate transporter F3L01_17270 PF01497 Periplasmic binding protein F3L01_17275 PF01032 FecCD transport family F3L01_17280 PF01032 FecCD transport family F3L01_17285 PF05675 Protein of unknown function (DUF817) F3L01_17290 PF13170 Protein of unknown function (DUF4003) F3L01_17305 PF10901 Protein of unknown function (DUF2690) F3L01_17315 PF03466 LysR substrate binding domain F3L01_17315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3L01_17320 PF00107 Zinc-binding dehydrogenase F3L01_17320 PF08240 Alcohol dehydrogenase GroES-like domain F3L01_17335 PF01713 Smr domain F3L01_17335 PF00488 MutS domain V F3L01_17345 PF09154 Domain of unknown function (DUF1939) F3L01_17345 PF00128 Alpha amylase, catalytic domain F3L01_17350 PF00797 N-acetyltransferase F3L01_17355 PF01432 Peptidase family M3 F3L01_17355 PF08439 Oligopeptidase F F3L01_17360 PF00144 Beta-lactamase F3L01_17375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3L01_17375 PF03466 LysR substrate binding domain F3L01_17385 PF03009 Glycerophosphoryl diester phosphodiesterase family F3L01_17390 PF01494 FAD binding domain F3L01_17395 PF01022 Bacterial regulatory protein, arsR family F3L01_17400 PF00107 Zinc-binding dehydrogenase F3L01_17400 PF08240 Alcohol dehydrogenase GroES-like domain F3L01_17405 PF02696 Uncharacterized ACR, YdiU/UPF0061 family F3L01_17410 PF17874 MalT-like TPR region F3L01_17410 PF18801 response regulator aspartate phosphatase H, N terminal F3L01_17420 PF04299 Putative FMN-binding domain F3L01_17440 PF01565 FAD binding domain F3L01_17440 PF02913 FAD linked oxidases, C-terminal domain F3L01_17465 PF01066 CDP-alcohol phosphatidyltransferase F3L01_17475 PF00581 Rhodanese-like domain F3L01_17475 PF00753 Metallo-beta-lactamase superfamily F3L01_17480 PF07992 Pyridine nucleotide-disulphide oxidoreductase F3L01_17490 PF00483 Nucleotidyl transferase F3L01_17500 PF01370 NAD dependent epimerase/dehydratase family F3L01_17505 PF16363 GDP-mannose 4,6 dehydratase F3L01_17510 PF18801 response regulator aspartate phosphatase H, N terminal F3L01_17515 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F3L01_17515 PF00672 HAMP domain F3L01_17515 PF02743 Cache domain F3L01_17555 PF00563 EAL domain F3L01_17555 PF00990 Diguanylate cyclase, GGDEF domain F3L01_17555 PF03707 Bacterial signalling protein N terminal repeat F3L01_17590 PF00989 PAS fold F3L01_17590 PF00512 His Kinase A (phospho-acceptor) domain F3L01_17590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3L01_17595 PF01752 Collagenase F3L01_17595 PF18496 Collagenase G catalytic helper subdomain F3L01_17595 PF08453 Peptidase family M9 N-terminal F3L01_17600 PF02308 MgtC family F3L01_17610 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily F3L01_17615 PF04294 VanW like protein F3L01_17625 PF13039 Protein of unknown function (DUF3900) F3L01_17625 PF13037 Domain of unknown function (DUF3898) F3L01_17640 PF00313 'Cold-shock' DNA-binding domain F3L01_17650 PF00258 Flavodoxin F3L01_17660 PF00293 NUDIX domain F3L01_17670 PF00132 Bacterial transferase hexapeptide (six repeats) F3L01_17680 PF00106 short chain dehydrogenase F3L01_17690 PF00206 Lyase F3L01_17690 PF14698 Argininosuccinate lyase C-terminal F3L01_17700 PF01156 Inosine-uridine preferring nucleoside hydrolase F3L01_17705 PF00474 Sodium:solute symporter family F3L01_17760 PF14151 YfhD-like protein F3L01_17765 PF13249 Squalene-hopene cyclase N-terminal domain F3L01_17765 PF13243 Squalene-hopene cyclase C-terminal domain F3L01_17770 PF02681 Divergent PAP2 family F3L01_17775 PF00892 EamA-like transporter family F3L01_17780 PF06961 Protein of unknown function (DUF1294) F3L01_17795 PF10609 NUBPL iron-transfer P-loop NTPase F3L01_17805 PF02391 MoaE protein F3L01_17810 PF03453 MoeA N-terminal region (domain I and II) F3L01_17810 PF00994 Probable molybdopterin binding domain F3L01_17810 PF03454 MoeA C-terminal region (domain IV) F3L01_17815 PF00899 ThiF family F3L01_17820 PF01226 Formate/nitrite transporter F3L01_17825 PF06463 Molybdenum Cofactor Synthesis C F3L01_17825 PF04055 Radical SAM superfamily F3L01_17830 PF02634 FdhD/NarQ family F3L01_17835 PF10057 Uncharacterized conserved protein (DUF2294) F3L01_17840 PF07849 Protein of unknown function (DUF1641) F3L01_17845 PF04879 Molybdopterin oxidoreductase Fe4S4 domain F3L01_17845 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region F3L01_17845 PF00037 4Fe-4S binding domain F3L01_17845 PF01568 Molydopterin dinucleotide binding domain F3L01_17845 PF00384 Molybdopterin oxidoreductase F3L01_17850 PF03323 Bacillus/Clostridium GerA spore germination protein F3L01_17865 PF13520 Amino acid permease F3L01_17900 PF08241 Methyltransferase domain F3L01_17905 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F3L01_17910 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F3L01_17915 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F3L01_17925 PF03816 Cell envelope-related transcriptional attenuator domain F3L01_17935 PF08281 Sigma-70, region 4 F3L01_17935 PF04542 Sigma-70 region 2 F3L01_17945 PF13732 Domain of unknown function (DUF4162) F3L01_17945 PF00005 ABC transporter F3L01_17955 PF01408 Oxidoreductase family, NAD-binding Rossmann fold F3L01_17955 PF02894 Oxidoreductase family, C-terminal alpha/beta domain F3L01_17960 PF00521 DNA gyrase/topoisomerase IV, subunit A F3L01_17960 PF03989 DNA gyrase C-terminal domain, beta-propeller F3L01_17965 PF01751 Toprim domain F3L01_17965 PF00986 DNA gyrase B subunit, carboxyl terminus F3L01_17965 PF00204 DNA gyrase B F3L01_17965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3L01_17970 PF13380 CoA binding domain F3L01_17975 PF13180 PDZ domain F3L01_17980 PF00072 Response regulator receiver domain F3L01_17980 PF00486 Transcriptional regulatory protein, C terminal F3L01_17985 PF04055 Radical SAM superfamily F3L01_17990 PF03477 ATP cone domain F3L01_17990 PF13597 Anaerobic ribonucleoside-triphosphate reductase F3L01_17995 PF02660 Glycerol-3-phosphate acyltransferase F3L01_18000 PF01521 Iron-sulphur cluster biosynthesis F3L01_18005 PF03061 Thioesterase superfamily F3L01_18010 PF01385 Probable transposase F3L01_18010 PF07282 Putative transposase DNA-binding domain F3L01_18010 PF12323 Helix-turn-helix domain F3L01_18015 PF01476 LysM domain F3L01_18015 PF00704 Glycosyl hydrolases family 18 F3L01_18025 PF08177 Small acid-soluble spore protein N family F3L01_18030 PF13040 Fur-regulated basic protein B F3L01_18035 PF17657 Bacterial DNA polymerase III alpha subunit finger domain F3L01_18035 PF00929 Exonuclease F3L01_18035 PF02811 PHP domain F3L01_18035 PF14579 Helix-hairpin-helix motif F3L01_18035 PF07733 Bacterial DNA polymerase III alpha NTPase domain F3L01_18035 PF11490 DNA polymerase III polC-type N-terminus II F3L01_18035 PF01336 OB-fold nucleic acid binding domain F3L01_18040 PF00578 AhpC/TSA family F3L01_18050 PF03412 Peptidase C39 family F3L01_18050 PF00005 ABC transporter F3L01_18050 PF00664 ABC transporter transmembrane region F3L01_18055 PF00330 Aconitase family (aconitate hydratase) F3L01_18055 PF00694 Aconitase C-terminal domain F3L01_18065 PF01522 Polysaccharide deacetylase F3L01_18075 PF08179 Small acid-soluble spore protein P family F3L01_18085 PF07690 Major Facilitator Superfamily F3L01_18095 PF01411 tRNA synthetases class II (A) F3L01_18095 PF02272 DHHA1 domain F3L01_18095 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain F3L01_18100 PF13344 Haloacid dehalogenase-like hydrolase F3L01_18100 PF00293 NUDIX domain F3L01_18110 PF02803 Thiolase, C-terminal domain F3L01_18110 PF00108 Thiolase, N-terminal domain F3L01_18115 PF00501 AMP-binding enzyme F3L01_18115 PF13193 AMP-binding enzyme C-terminal domain F3L01_18120 PF02632 BioY family F3L01_18125 PF13193 AMP-binding enzyme C-terminal domain F3L01_18125 PF00501 AMP-binding enzyme F3L01_18130 PF01381 Helix-turn-helix F3L01_18150 PF05532 CsbD-like F3L01_18170 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 F3L01_18170 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) F3L01_18185 PF13426 PAS domain F3L01_18185 PF13188 PAS domain F3L01_18185 PF00989 PAS fold F3L01_18185 PF00512 His Kinase A (phospho-acceptor) domain F3L01_18185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3L01_18190 PF01738 Dienelactone hydrolase family F3L01_18200 PF00474 Sodium:solute symporter family F3L01_18205 PF01645 Conserved region in glutamate synthase F3L01_18210 PF00724 NADH:flavin oxidoreductase / NADH oxidase family F3L01_18215 PF02559 CarD-like/TRCF domain F3L01_18225 PF01979 Amidohydrolase family F3L01_18230 PF17391 Urocanase N-terminal domain F3L01_18230 PF01175 Urocanase Rossmann-like domain F3L01_18230 PF17392 Urocanase C-terminal domain F3L01_18235 PF00221 Aromatic amino acid lyase F3L01_18240 PF09021 HutP F3L01_18270 PF11084 Protein of unknown function (DUF2621) F3L01_18275 PF07301 Protein of unknown function (DUF1453) F3L01_18280 PF02683 Cytochrome C biogenesis protein transmembrane region F3L01_18295 PF01546 Peptidase family M20/M25/M40 F3L01_18295 PF07687 Peptidase dimerisation domain F3L01_18305 PF00005 ABC transporter F3L01_18320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3L01_18320 PF03466 LysR substrate binding domain F3L01_18325 PF03788 LrgA family F3L01_18330 PF04172 LrgB-like family F3L01_18335 PF00293 NUDIX domain F3L01_18335 PF13344 Haloacid dehalogenase-like hydrolase F3L01_18345 PF01925 Sulfite exporter TauE/SafE F3L01_18365 PF01183 Glycosyl hydrolases family 25 F3L01_18365 PF08239 Bacterial SH3 domain F3L01_18370 PF00005 ABC transporter F3L01_18370 PF00664 ABC transporter transmembrane region F3L01_18375 PF00664 ABC transporter transmembrane region F3L01_18375 PF00005 ABC transporter F3L01_18380 PF03672 Uncharacterised protein family (UPF0154) F3L01_18385 PF10747 Sporulation inhibitor of replication protein SirA F3L01_18390 PF02780 Transketolase, C-terminal domain F3L01_18390 PF02779 Transketolase, pyrimidine binding domain F3L01_18390 PF00456 Transketolase, thiamine diphosphate binding domain F3L01_18395 PF00528 Binding-protein-dependent transport system inner membrane component F3L01_18405 PF00005 ABC transporter F3L01_18410 PF00497 Bacterial extracellular solute-binding proteins, family 3 F3L01_18420 PF05979 Bacterial protein of unknown function (DUF896) F3L01_18425 PF00239 Resolvase, N terminal domain F3L01_18430 PF00717 Peptidase S24-like F3L01_18430 PF01726 LexA DNA binding domain F3L01_18445 PF03551 Transcriptional regulator PadR-like family F3L01_18450 PF01510 N-acetylmuramoyl-L-alanine amidase F3L01_18470 PF01464 Transglycosylase SLT domain F3L01_18470 PF10145 Phage-related minor tail protein F3L01_18470 PF01551 Peptidase family M23 F3L01_18505 PF00717 Peptidase S24-like F3L01_18505 PF01726 LexA DNA binding domain F3L01_18550 PF01510 N-acetylmuramoyl-L-alanine amidase F3L01_18550 PF01476 LysM domain F3L01_18550 PF01471 Putative peptidoglycan binding domain F3L01_18555 PF05105 Bacteriophage holin family F3L01_18700 PF08281 Sigma-70, region 4 F3L01_18810 PF01381 Helix-turn-helix F3L01_18820 PF00589 Phage integrase family F3L01_18820 PF02899 Phage integrase, N-terminal SAM-like domain F3L01_18825 PF00120 Glutamine synthetase, catalytic domain F3L01_18825 PF03951 Glutamine synthetase, beta-Grasp domain F3L01_18830 PF13411 MerR HTH family regulatory protein F3L01_18835 PF06838 Methionine gamma-lyase F3L01_18840 PF13167 GTP-binding GTPase N-terminal F3L01_18840 PF01926 50S ribosome-binding GTPase F3L01_18840 PF16360 GTP-binding GTPase Middle Region F3L01_18845 PF03458 UPF0126 domain F3L01_18850 PF17866 AAA lid domain F3L01_18850 PF00004 ATPase family associated with various cellular activities (AAA) F3L01_18865 PF17209 Hfq protein F3L01_18880 PF01476 LysM domain F3L01_18880 PF06725 3D domain F3L01_18890 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit F3L01_18890 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 F3L01_18895 PF00294 pfkB family carbohydrate kinase F3L01_18900 PF00455 DeoR C terminal sensor domain F3L01_18900 PF08220 DeoR-like helix-turn-helix domain F3L01_18905 PF00465 Iron-containing alcohol dehydrogenase F3L01_18910 PF04238 Protein of unknown function (DUF420) F3L01_18920 PF00324 Amino acid permease F3L01_18930 PF00704 Glycosyl hydrolases family 18 F3L01_18930 PF00041 Fibronectin type III domain F3L01_18935 PF00149 Calcineurin-like phosphoesterase F3L01_18935 PF10518 TAT (twin-arginine translocation) pathway signal sequence F3L01_18940 PF01226 Formate/nitrite transporter F3L01_18945 PF00216 Bacterial DNA-binding protein F3L01_18955 PF00403 Heavy-metal-associated domain F3L01_18960 PF00403 Heavy-metal-associated domain F3L01_18965 PF02583 Metal-sensitive transcriptional repressor F3L01_18975 PF00756 Putative esterase F3L01_18980 PF00005 ABC transporter F3L01_18985 PF01032 FecCD transport family F3L01_18990 PF01032 FecCD transport family F3L01_18995 PF01497 Periplasmic binding protein F3L01_19000 PF03372 Endonuclease/Exonuclease/phosphatase family F3L01_19005 PF02805 Metal binding domain of Ada F3L01_19005 PF12833 Helix-turn-helix domain F3L01_19010 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain F3L01_19010 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain F3L01_19015 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain F3L01_19015 PF00730 HhH-GPD superfamily base excision DNA repair protein F3L01_19020 PF01546 Peptidase family M20/M25/M40 F3L01_19020 PF07687 Peptidase dimerisation domain F3L01_19035 PF00561 alpha/beta hydrolase fold F3L01_19040 PF03707 Bacterial signalling protein N terminal repeat F3L01_19040 PF00563 EAL domain F3L01_19040 PF00990 Diguanylate cyclase, GGDEF domain F3L01_19045 PF04101 Glycosyltransferase family 28 C-terminal domain F3L01_19045 PF03033 Glycosyltransferase family 28 N-terminal domain F3L01_19055 PF16363 GDP-mannose 4,6 dehydratase F3L01_19060 PF02719 Polysaccharide biosynthesis protein F3L01_19060 PF08485 Polysaccharide biosynthesis protein C-terminal F3L01_19075 PF10787 Uncharacterised protein from bacillus cereus group F3L01_19080 PF04172 LrgB-like family F3L01_19085 PF03788 LrgA family F3L01_19090 PF00392 Bacterial regulatory proteins, gntR family F3L01_19090 PF00155 Aminotransferase class I and II F3L01_19100 PF00392 Bacterial regulatory proteins, gntR family F3L01_19100 PF07702 UTRA domain F3L01_19105 PF00232 Glycosyl hydrolase family 1 F3L01_19110 PF00388 Phosphatidylinositol-specific phospholipase C, X domain F3L01_19115 PF00082 Subtilase family F3L01_19120 PF07486 Cell Wall Hydrolase F3L01_19135 PF00884 Sulfatase F3L01_19140 PF00350 Dynamin family F3L01_19150 PF01119 DNA mismatch repair protein, C-terminal domain F3L01_19150 PF08676 MutL C terminal dimerisation domain F3L01_19155 PF05190 MutS family domain IV F3L01_19155 PF00488 MutS domain V F3L01_19155 PF01624 MutS domain I F3L01_19155 PF05192 MutS domain III F3L01_19155 PF05188 MutS domain II F3L01_19160 PF10628 Outer spore coat protein E (CotE) F3L01_19165 PF06133 Control of competence regulator ComK, YlbF/YmcA F3L01_19170 PF00919 Uncharacterized protein family UPF0004 F3L01_19170 PF01938 TRAM domain F3L01_19170 PF04055 Radical SAM superfamily F3L01_19175 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain F3L01_19180 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase F3L01_19180 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II F3L01_19180 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg F3L01_19185 PF01244 Membrane dipeptidase (Peptidase family M19) F3L01_19190 PF04232 Stage V sporulation protein S (SpoVS) F3L01_19195 PF13277 YmdB-like protein F3L01_19200 PF12072 Domain of unknown function (DUF3552) F3L01_19200 PF00013 KH domain F3L01_19200 PF01966 HD domain F3L01_19205 PF00154 recA bacterial DNA recombination protein F3L01_19210 PF18146 Damage-inducible protein CinA KH domain F3L01_19210 PF00994 Probable molybdopterin binding domain F3L01_19210 PF02464 Competence-damaged protein F3L01_19215 PF01066 CDP-alcohol phosphatidyltransferase F3L01_19220 PF13464 Domain of unknown function (DUF4115) F3L01_19225 PF11868 Protein of unknown function (DUF3388) F3L01_19230 PF11588 Protein of unknown function (DUF3243) F3L01_19240 PF05193 Peptidase M16 inactive domain F3L01_19240 PF00675 Insulinase (Peptidase family M16) F3L01_19245 PF05193 Peptidase M16 inactive domain F3L01_19270 PF00392 Bacterial regulatory proteins, gntR family F3L01_19270 PF07702 UTRA domain F3L01_19280 PF01580 FtsK/SpoIIIE family F3L01_19280 PF09397 Ftsk gamma domain F3L01_19280 PF17854 FtsK alpha domain F3L01_19285 PF14035 YlzJ-like protein F3L01_19290 PF00574 Clp protease F3L01_19295 PF00753 Metallo-beta-lactamase superfamily F3L01_19295 PF17770 Ribonuclease J C-terminal domain F3L01_19295 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain F3L01_19300 PF00701 Dihydrodipicolinate synthetase family F3L01_19305 PF13840 ACT domain F3L01_19305 PF00696 Amino acid kinase family F3L01_19310 PF01118 Semialdehyde dehydrogenase, NAD binding domain F3L01_19310 PF02774 Semialdehyde dehydrogenase, dimerisation domain F3L01_19315 PF02441 Flavoprotein F3L01_19320 PF01262 Alanine dehydrogenase/PNT, C-terminal domain F3L01_19320 PF16924 Dipicolinate synthase subunit A N-terminal domain F3L01_19325 PF05239 PRC-barrel domain F3L01_19330 PF05193 Peptidase M16 inactive domain F3L01_19330 PF00675 Insulinase (Peptidase family M16) F3L01_19335 PF01522 Polysaccharide deacetylase F3L01_19340 PF01138 3' exoribonuclease family, domain 1 F3L01_19340 PF03725 3' exoribonuclease family, domain 2 F3L01_19340 PF00575 S1 RNA binding domain F3L01_19340 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain F3L01_19340 PF00013 KH domain F3L01_19345 PF00312 Ribosomal protein S15 F3L01_19350 PF06574 FAD synthetase F3L01_19350 PF01687 Riboflavin kinase F3L01_19355 PF01509 TruB family pseudouridylate synthase (N terminal domain) F3L01_19355 PF16198 tRNA pseudouridylate synthase B C-terminal domain F3L01_19360 PF02033 Ribosome-binding factor A F3L01_19365 PF04456 Protein of unknown function (DUF503) F3L01_19370 PF04760 Translation initiation factor IF-2, N-terminal region F3L01_19370 PF00009 Elongation factor Tu GTP binding domain F3L01_19370 PF11987 Translation-initiation factor 2 F3L01_19375 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family F3L01_19380 PF04296 Protein of unknown function (DUF448) F3L01_19385 PF00575 S1 RNA binding domain F3L01_19385 PF13184 NusA-like KH domain F3L01_19385 PF08529 NusA N-terminal domain F3L01_19390 PF02576 RimP N-terminal domain F3L01_19390 PF17384 RimP C-terminal SH3 domain F3L01_19395 PF00929 Exonuclease F3L01_19395 PF02811 PHP domain F3L01_19395 PF14480 DNA polymerase III polC-type N-terminus I F3L01_19395 PF11490 DNA polymerase III polC-type N-terminus II F3L01_19395 PF17657 Bacterial DNA polymerase III alpha subunit finger domain F3L01_19395 PF07733 Bacterial DNA polymerase III alpha NTPase domain F3L01_19395 PF14579 Helix-hairpin-helix motif F3L01_19400 PF04073 Aminoacyl-tRNA editing domain F3L01_19400 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) F3L01_19400 PF03129 Anticodon binding domain F3L01_19405 PF02163 Peptidase family M50 F3L01_19405 PF17820 PDZ domain F3L01_19410 PF13288 DXP reductoisomerase C-terminal domain F3L01_19410 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain F3L01_19410 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase F3L01_19420 PF01255 Putative undecaprenyl diphosphate synthase F3L01_19425 PF01765 Ribosome recycling factor F3L01_19430 PF00696 Amino acid kinase family F3L01_19435 PF00889 Elongation factor TS F3L01_19440 PF00318 Ribosomal protein S2 F3L01_19445 PF08222 CodY helix-turn-helix domain F3L01_19445 PF06018 CodY GAF-like domain F3L01_19450 PF07724 AAA domain (Cdc48 subfamily) F3L01_19450 PF00004 ATPase family associated with various cellular activities (AAA) F3L01_19450 PF10431 C-terminal, D2-small domain, of ClpB protein F3L01_19455 PF00227 Proteasome subunit F3L01_19460 PF00589 Phage integrase family F3L01_19460 PF02899 Phage integrase, N-terminal SAM-like domain F3L01_19465 PF01134 Glucose inhibited division protein A F3L01_19470 PF01131 DNA topoisomerase F3L01_19470 PF01396 Topoisomerase DNA binding C4 zinc finger F3L01_19470 PF01751 Toprim domain F3L01_19475 PF02481 DNA recombination-mediator protein A F3L01_19480 PF00549 CoA-ligase F3L01_19480 PF02629 CoA binding domain F3L01_19485 PF08442 ATP-grasp domain F3L01_19485 PF00549 CoA-ligase F3L01_19490 PF01351 Ribonuclease HII F3L01_19495 PF01926 50S ribosome-binding GTPase F3L01_19500 PF10502 Signal peptidase, peptidase S26 F3L01_19505 PF01245 Ribosomal protein L19 F3L01_19510 PF01746 tRNA (Guanine-1)-methyltransferase F3L01_19515 PF01782 RimM N-terminal domain F3L01_19515 PF05239 PRC-barrel domain F3L01_19525 PF00886 Ribosomal protein S16 F3L01_19530 PF02881 SRP54-type protein, helical bundle domain F3L01_19530 PF02978 Signal peptide binding domain F3L01_19530 PF00448 SRP54-type protein, GTPase domain F3L01_19535 PF04297 Putative helix-turn-helix protein, YlxM / p13 like F3L01_19540 PF00448 SRP54-type protein, GTPase domain F3L01_19540 PF02881 SRP54-type protein, helical bundle domain F3L01_19545 PF02463 RecF/RecN/SMC N terminal domain F3L01_19545 PF06470 SMC proteins Flexible Hinge Domain F3L01_19550 PF00035 Double-stranded RNA binding motif F3L01_19550 PF14622 Ribonuclease-III-like F3L01_19555 PF00550 Phosphopantetheine attachment site F3L01_19565 PF00698 Acyl transferase domain F3L01_19570 PF02504 Fatty acid synthesis protein F3L01_19575 PF03061 Thioesterase superfamily F3L01_19580 PF17191 RecG wedge domain F3L01_19580 PF00271 Helicase conserved C-terminal domain F3L01_19580 PF00270 DEAD/DEAH box helicase F3L01_19585 PF13684 Dihydroxyacetone kinase family F3L01_19585 PF02734 DAK2 domain F3L01_19590 PF03780 Asp23 family, cell envelope-related function F3L01_19595 PF00830 Ribosomal L28 family F3L01_19600 PF08183 Stage V sporulation protein family F3L01_19605 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain F3L01_19605 PF04263 Thiamin pyrophosphokinase, catalytic domain F3L01_19610 PF00834 Ribulose-phosphate 3 epimerase family F3L01_19615 PF03193 RsgA GTPase F3L01_19615 PF16745 RsgA N-terminal domain F3L01_19620 PF00069 Protein kinase domain F3L01_19620 PF03793 PASTA domain F3L01_19630 PF04055 Radical SAM superfamily F3L01_19635 PF01029 NusB family F3L01_19635 PF01189 16S rRNA methyltransferase RsmB/F F3L01_19640 PF02911 Formyl transferase, C-terminal domain F3L01_19640 PF00551 Formyl transferase F3L01_19645 PF01327 Polypeptide deformylase F3L01_19650 PF18319 PriA DNA helicase Cys-rich region (CRR) domain F3L01_19650 PF17764 3′ DNA-binding domain (3′BD) F3L01_19650 PF00271 Helicase conserved C-terminal domain F3L01_19650 PF18074 Primosomal protein N C-terminal domain F3L01_19650 PF04851 Type III restriction enzyme, res subunit F3L01_19655 PF04127 DNA / pantothenate metabolism flavoprotein F3L01_19655 PF02441 Flavoprotein F3L01_19660 PF01192 RNA polymerase Rpb6 F3L01_19665 PF00625 Guanylate kinase F3L01_19670 PF04025 Domain of unknown function (DUF370) F3L01_19675 PF08340 Domain of unknown function (DUF1732) F3L01_19675 PF03755 YicC-like family, N-terminal region F3L01_19685 PF05670 NFACT protein RNA binding domain F3L01_19695 PF00557 Metallopeptidase family M24 F3L01_19695 PF01321 Creatinase/Prolidase N-terminal domain F3L01_19735 PF00156 Phosphoribosyl transferase domain F3L01_19740 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family F3L01_19745 PF01180 Dihydroorotate dehydrogenase F3L01_19750 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B F3L01_19755 PF02142 MGS-like domain F3L01_19755 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain F3L01_19755 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain F3L01_19760 PF00117 Glutamine amidotransferase class-I F3L01_19760 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain F3L01_19765 PF01979 Amidohydrolase family F3L01_19770 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain F3L01_19770 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain F3L01_19775 PF00860 Permease family F3L01_19780 PF00156 Phosphoribosyl transferase domain F3L01_19785 PF00849 RNA pseudouridylate synthase F3L01_19785 PF01479 S4 domain F3L01_19790 PF01252 Signal peptidase (SPase) II F3L01_19800 PF06827 Zinc finger found in FPG and IleRS F3L01_19800 PF08264 Anticodon-binding domain of tRNA F3L01_19800 PF00133 tRNA synthetases class I (I, L, M and V) F3L01_19805 PF05103 DivIVA protein F3L01_19810 PF01479 S4 domain F3L01_19810 PF17774 Putative RNA-binding domain in YlmH F3L01_19815 PF02325 YGGT family F3L01_19820 PF04472 Cell division protein SepF F3L01_19825 PF01168 Alanine racemase, N-terminal domain F3L01_19835 PF05239 PRC-barrel domain F3L01_19840 PF04539 Sigma-70 region 3 F3L01_19840 PF04542 Sigma-70 region 2 F3L01_19840 PF04545 Sigma-70, region 4 F3L01_19845 PF04542 Sigma-70 region 2 F3L01_19845 PF04545 Sigma-70, region 4 F3L01_19850 PF03419 Sporulation factor SpoIIGA F3L01_19855 PF00091 Tubulin/FtsZ family, GTPase domain F3L01_19855 PF12327 FtsZ family, C-terminal domain F3L01_19860 PF02491 SHS2 domain inserted in FTSA F3L01_19865 PF08478 POTRA domain, FtsQ-type F3L01_19865 PF03799 Cell division protein FtsQ F3L01_19870 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain F3L01_19870 PF01565 FAD binding domain F3L01_19875 PF04101 Glycosyltransferase family 28 C-terminal domain F3L01_19875 PF03033 Glycosyltransferase family 28 N-terminal domain F3L01_19880 PF01098 Cell cycle protein F3L01_19885 PF08245 Mur ligase middle domain F3L01_19885 PF02875 Mur ligase family, glutamate ligase domain F3L01_19890 PF00953 Glycosyl transferase family 4 F3L01_19890 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 F3L01_19895 PF08245 Mur ligase middle domain F3L01_19895 PF02875 Mur ligase family, glutamate ligase domain F3L01_19895 PF01225 Mur ligase family, catalytic domain F3L01_19900 PF03793 PASTA domain F3L01_19900 PF00905 Penicillin binding protein transpeptidase domain F3L01_19900 PF03717 Penicillin-binding Protein dimerisation domain F3L01_19910 PF04977 Septum formation initiator F3L01_19915 PF01795 MraW methylase family F3L01_19920 PF10079 Bacillithiol biosynthesis BshC F3L01_19925 PF02558 Ketopantoate reductase PanE/ApbA F3L01_19925 PF08546 Ketopantoate reductase PanE/ApbA C terminal F3L01_19930 PF00583 Acetyltransferase (GNAT) family F3L01_19940 PF01783 Ribosomal L32p protein family F3L01_19945 PF02620 Large ribosomal RNA subunit accumulation protein YceD F3L01_19985 PF01510 N-acetylmuramoyl-L-alanine amidase F3L01_19985 PF01471 Putative peptidoglycan binding domain F3L01_19985 PF01476 LysM domain F3L01_19990 PF05105 Bacteriophage holin family F3L01_19995 PF10779 Haemolysin XhlA F3L01_20060 PF00574 Clp protease F3L01_20070 PF03354 Phage Terminase F3L01_20105 PF00589 Phage integrase family F3L01_20165 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin F3L01_20165 PF18277 AbrB C-terminal domain F3L01_20190 PF01381 Helix-turn-helix F3L01_20200 PF01381 Helix-turn-helix F3L01_20220 PF00589 Phage integrase family F3L01_20220 PF14659 Phage integrase, N-terminal SAM-like domain F3L01_20225 PF05636 HIGH Nucleotidyl Transferase F3L01_20230 PF13180 PDZ domain F3L01_20230 PF05362 Lon protease (S16) C-terminal proteolytic domain F3L01_20235 PF01734 Patatin-like phospholipase F3L01_20240 PF07670 Nucleoside recognition F3L01_20245 PF01467 Cytidylyltransferase-like F3L01_20260 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) F3L01_20265 PF06133 Control of competence regulator ComK, YlbF/YmcA F3L01_20270 PF00300 Histidine phosphatase superfamily (branch 1) F3L01_20275 PF14003 YlbE-like protein F3L01_20280 PF14071 Putative coat protein F3L01_20285 PF00188 Cysteine-rich secretory protein family F3L01_20285 PF14504 CAP-associated N-terminal F3L01_20290 PF08868 YugN-like family F3L01_20295 PF00795 Carbon-nitrogen hydrolase F3L01_20300 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) F3L01_20305 PF03626 Prokaryotic Cytochrome C oxidase subunit IV F3L01_20310 PF00510 Cytochrome c oxidase subunit III F3L01_20315 PF00115 Cytochrome C and Quinol oxidase polypeptide I F3L01_20320 PF00034 Cytochrome c F3L01_20320 PF02790 Cytochrome C oxidase subunit II, transmembrane domain F3L01_20320 PF00116 Cytochrome C oxidase subunit II, periplasmic domain F3L01_20325 PF01040 UbiA prenyltransferase family F3L01_20330 PF02628 Cytochrome oxidase assembly protein F3L01_20335 PF02785 Biotin carboxylase C-terminal domain F3L01_20335 PF00682 HMGL-like F3L01_20335 PF02436 Conserved carboxylase domain F3L01_20335 PF00364 Biotin-requiring enzyme F3L01_20335 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain F3L01_20335 PF00289 Biotin carboxylase, N-terminal domain F3L01_20345 PF01098 Cell cycle protein F3L01_20350 PF07408 Protein of unknown function (DUF1507) F3L01_20360 PF13638 PIN domain F3L01_20360 PF02562 PhoH-like protein F3L01_20370 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) F3L01_20380 PF14036 YlaH-like protein F3L01_20395 PF00459 Inositol monophosphatase family F3L01_20405 PF06335 Protein of unknown function (DUF1054) F3L01_20410 PF05256 Uncharacterised protein family (UPF0223) F3L01_20415 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain F3L01_20415 PF01276 Orn/Lys/Arg decarboxylase, major domain F3L01_20455 PF07992 Pyridine nucleotide-disulphide oxidoreductase F3L01_20455 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain F3L01_20460 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) F3L01_20460 PF00364 Biotin-requiring enzyme F3L01_20460 PF02817 e3 binding domain F3L01_20465 PF02779 Transketolase, pyrimidine binding domain F3L01_20465 PF02780 Transketolase, C-terminal domain F3L01_20470 PF00676 Dehydrogenase E1 component F3L01_20480 PF01327 Polypeptide deformylase F3L01_20500 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain F3L01_20500 PF17770 Ribonuclease J C-terminal domain F3L01_20500 PF00753 Metallo-beta-lactamase superfamily F3L01_20505 PF02254 TrkA-N domain F3L01_20505 PF02080 TrkA-C domain F3L01_20515 PF01546 Peptidase family M20/M25/M40 F3L01_20515 PF07687 Peptidase dimerisation domain F3L01_20520 PF00132 Bacterial transferase hexapeptide (six repeats) F3L01_20520 PF14602 Hexapeptide repeat of succinyl-transferase F3L01_20520 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal F3L01_20525 PF03466 LysR substrate binding domain F3L01_20525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3L01_20540 PF04308 Ribonuclease H-like F3L01_20545 PF08796 Protein of unknown function (DUF1797) F3L01_20560 PF10388 EAL-domain associated signalling protein domain F3L01_20560 PF00563 EAL domain F3L01_20570 PF00149 Calcineurin-like phosphoesterase F3L01_20570 PF10518 TAT (twin-arginine translocation) pathway signal sequence F3L01_20580 PF13090 Polyphosphate kinase C-terminal domain 2 F3L01_20580 PF02503 Polyphosphate kinase middle domain F3L01_20580 PF13089 Polyphosphate kinase N-terminal domain F3L01_20580 PF17941 Polyphosphate kinase C-terminal domain 1 F3L01_20585 PF02541 Ppx/GppA phosphatase family F3L01_20590 PF14177 YkyB-like protein F3L01_20615 PF07690 Major Facilitator Superfamily F3L01_20630 PF08267 Cobalamin-independent synthase, N-terminal domain F3L01_20630 PF01717 Cobalamin-independent synthase, Catalytic domain F3L01_20640 PF14040 Deoxyribonuclease NucA/NucB F3L01_20645 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) F3L01_20645 PF01348 Type II intron maturase F3L01_20660 PF00512 His Kinase A (phospho-acceptor) domain F3L01_20660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3L01_20670 PF00155 Aminotransferase class I and II F3L01_20675 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family F3L01_20675 PF00356 Bacterial regulatory proteins, lacI family F3L01_20680 PF00528 Binding-protein-dependent transport system inner membrane component F3L01_20685 PF00528 Binding-protein-dependent transport system inner membrane component F3L01_20690 PF13416 Bacterial extracellular solute-binding protein F3L01_20695 PF02903 Alpha amylase, N-terminal ig-like domain F3L01_20695 PF16657 Maltogenic Amylase, C-terminal domain F3L01_20695 PF00128 Alpha amylase, catalytic domain F3L01_20700 PF16657 Maltogenic Amylase, C-terminal domain F3L01_20700 PF00128 Alpha amylase, catalytic domain F3L01_20705 PF03459 TOBE domain F3L01_20705 PF17912 MalK OB fold domain F3L01_20705 PF00005 ABC transporter F3L01_20745 PF00108 Thiolase, N-terminal domain F3L01_20745 PF02803 Thiolase, C-terminal domain F3L01_20750 PF00293 NUDIX domain F3L01_20780 PF03551 Transcriptional regulator PadR-like family F3L01_20795 PF01008 Initiation factor 2 subunit family F3L01_20800 PF01636 Phosphotransferase enzyme family F3L01_20805 PF00795 Carbon-nitrogen hydrolase F3L01_20810 PF00155 Aminotransferase class I and II F3L01_20815 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain F3L01_20815 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain F3L01_20825 PF00596 Class II Aldolase and Adducin N-terminal domain F3L01_20830 PF03079 ARD/ARD' family F3L01_20845 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase F3L01_20845 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase F3L01_20850 PF00144 Beta-lactamase F3L01_20855 PF00990 Diguanylate cyclase, GGDEF domain F3L01_20860 PF00881 Nitroreductase family F3L01_20875 PF02896 PEP-utilising enzyme, TIM barrel domain F3L01_20875 PF00391 PEP-utilising enzyme, mobile domain F3L01_20875 PF05524 PEP-utilising enzyme, N-terminal F3L01_20880 PF00381 PTS HPr component phosphorylation site F3L01_20885 PF00367 phosphotransferase system, EIIB F3L01_20885 PF02378 Phosphotransferase system, EIIC F3L01_20885 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 F3L01_20890 PF00874 PRD domain F3L01_20890 PF03123 CAT RNA binding domain F3L01_20900 PF00392 Bacterial regulatory proteins, gntR family F3L01_20900 PF07702 UTRA domain F3L01_20905 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase F3L01_20910 PF01979 Amidohydrolase family F3L01_20920 PF04079 Segregation and condensation complex subunit ScpB F3L01_20930 PF02616 Segregation and condensation protein ScpA F3L01_20940 PF03745 Domain of unknown function (DUF309) F3L01_20945 PF00583 Acetyltransferase (GNAT) family F3L01_20950 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD F3L01_20955 PF06207 Protein of unknown function (DUF1002) F3L01_20965 PF03323 Bacillus/Clostridium GerA spore germination protein F3L01_20970 PF14097 Stage V sporulation protein AE1 F3L01_20975 PF03862 SpoVAC/SpoVAEB sporulation membrane protein F3L01_20980 PF07451 Stage V sporulation protein AD (SpoVAD) F3L01_20985 PF03862 SpoVAC/SpoVAEB sporulation membrane protein F3L01_20990 PF13782 Stage V sporulation protein AB F3L01_20995 PF12164 Stage V sporulation protein AA F3L01_21005 PF00209 Sodium:neurotransmitter symporter family F3L01_21010 PF04545 Sigma-70, region 4 F3L01_21010 PF04542 Sigma-70 region 2 F3L01_21010 PF04539 Sigma-70 region 3 F3L01_21015 PF13581 Histidine kinase-like ATPase domain F3L01_21020 PF01740 STAS domain F3L01_21025 PF00768 D-alanyl-D-alanine carboxypeptidase F3L01_21025 PF07943 Penicillin-binding protein 5, C-terminal domain F3L01_21035 PF00392 Bacterial regulatory proteins, gntR family F3L01_21040 PF00005 ABC transporter F3L01_21060 PF01047 MarR family F3L01_21070 PF00860 Permease family F3L01_21075 PF01544 CorA-like Mg2+ transporter protein F3L01_21080 PF02885 Glycosyl transferase family, helical bundle domain F3L01_21080 PF00591 Glycosyl transferase family, a/b domain F3L01_21080 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain F3L01_21085 PF01048 Phosphorylase superfamily F3L01_21090 PF01676 Metalloenzyme superfamily F3L01_21095 PF13115 YtkA-like F3L01_21100 PF02899 Phage integrase, N-terminal SAM-like domain F3L01_21100 PF00589 Phage integrase family F3L01_21105 PF14004 Protein of unknown function (DUF4227) F3L01_21110 PF01475 Ferric uptake regulator family F3L01_21115 PF01944 Stage II sporulation protein M F3L01_21125 PF00293 NUDIX domain F3L01_21130 PF13072 Mother cell inhibitor of FtsZ F3L01_21135 PF00248 Aldo/keto reductase family F3L01_21140 PF00248 Aldo/keto reductase family F3L01_21145 PF13673 Acetyltransferase (GNAT) domain F3L01_21145 PF04229 GrpB protein F3L01_21155 PF00746 LPXTG cell wall anchor motif F3L01_21155 PF02872 5'-nucleotidase, C-terminal domain F3L01_21155 PF00149 Calcineurin-like phosphoesterase F3L01_21155 PF00565 Staphylococcal nuclease homologue F3L01_21165 PF12146 Serine aminopeptidase, S33 F3L01_21170 PF13726 Na+-H+ antiporter family F3L01_21170 PF03553 Na+/H+ antiporter family F3L01_21175 PF00356 Bacterial regulatory proteins, lacI family F3L01_21180 PF00583 Acetyltransferase (GNAT) family F3L01_21185 PF12146 Serine aminopeptidase, S33 F3L01_21190 PF10827 Protein of unknown function (DUF2552) F3L01_21200 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region F3L01_21200 PF01872 RibD C-terminal domain F3L01_21205 PF00677 Lumazine binding domain F3L01_21210 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase F3L01_21210 PF00925 GTP cyclohydrolase II F3L01_21215 PF00885 6,7-dimethyl-8-ribityllumazine synthase F3L01_21225 PF04055 Radical SAM superfamily F3L01_21225 PF06968 Biotin and Thiamin Synthesis associated domain F3L01_21230 PF13847 Methyltransferase domain F3L01_21235 PF12697 Alpha/beta hydrolase family F3L01_21235 PF08241 Methyltransferase domain F3L01_21240 PF00155 Aminotransferase class I and II F3L01_21250 PF00202 Aminotransferase class-III F3L01_21265 PF02872 5'-nucleotidase, C-terminal domain F3L01_21265 PF00149 Calcineurin-like phosphoesterase F3L01_21275 PF01037 Lrp/AsnC ligand binding domain F3L01_21275 PF13404 AsnC-type helix-turn-helix domain F3L01_21290 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain F3L01_21290 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain F3L01_21295 PF00202 Aminotransferase class-III F3L01_21300 PF00696 Amino acid kinase family F3L01_21305 PF01960 ArgJ family F3L01_21310 PF02774 Semialdehyde dehydrogenase, dimerisation domain F3L01_21310 PF01118 Semialdehyde dehydrogenase, NAD binding domain F3L01_21320 PF00106 short chain dehydrogenase F3L01_21325 PF00753 Metallo-beta-lactamase superfamily F3L01_21330 PF14748 Pyrroline-5-carboxylate reductase dimerisation F3L01_21330 PF03807 NADP oxidoreductase coenzyme F420-dependent F3L01_21335 PF03313 Serine dehydratase alpha chain F3L01_21340 PF03315 Serine dehydratase beta chain F3L01_21340 PF01842 ACT domain F3L01_21350 PF00753 Metallo-beta-lactamase superfamily F3L01_21350 PF12706 Beta-lactamase superfamily domain F3L01_21365 PF11799 impB/mucB/samB family C-terminal domain F3L01_21365 PF00817 impB/mucB/samB family F3L01_21365 PF11798 IMS family HHH motif F3L01_21370 PF07687 Peptidase dimerisation domain F3L01_21370 PF01546 Peptidase family M20/M25/M40 F3L01_21375 PF13302 Acetyltransferase (GNAT) domain F3L01_21390 PF03734 L,D-transpeptidase catalytic domain F3L01_21395 PF06081 Aromatic acid exporter family member 1 F3L01_21395 PF11728 Putative aromatic acid exporter C-terminal domain F3L01_21400 PF00005 ABC transporter F3L01_21405 PF00528 Binding-protein-dependent transport system inner membrane component F3L01_21410 PF00497 Bacterial extracellular solute-binding proteins, family 3 F3L01_21415 PF06491 Disulphide isomerase F3L01_21420 PF11208 Protein of unknown function (DUF2992) F3L01_21425 PF09297 NADH pyrophosphatase zinc ribbon domain F3L01_21425 PF00293 NUDIX domain F3L01_21430 PF04239 Protein of unknown function (DUF421) F3L01_21435 PF01098 Cell cycle protein F3L01_21440 PF02817 e3 binding domain F3L01_21440 PF00364 Biotin-requiring enzyme F3L01_21440 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) F3L01_21445 PF02779 Transketolase, pyrimidine binding domain F3L01_21445 PF02780 Transketolase, C-terminal domain F3L01_21450 PF00676 Dehydrogenase E1 component F3L01_21455 PF07992 Pyridine nucleotide-disulphide oxidoreductase F3L01_21455 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain F3L01_21460 PF00871 Acetokinase family F3L01_21465 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain F3L01_21465 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase F3L01_21470 PF01515 Phosphate acetyl/butaryl transferase F3L01_21480 PF00158 Sigma-54 interaction domain F3L01_21480 PF00989 PAS fold F3L01_21480 PF02954 Bacterial regulatory protein, Fis family F3L01_21490 PF03009 Glycerophosphoryl diester phosphodiesterase family F3L01_21495 PF14174 YycC-like protein F3L01_21505 PF00072 Response regulator receiver domain F3L01_21505 PF08769 Sporulation initiation factor Spo0A C terminal F3L01_21515 PF17820 PDZ domain F3L01_21515 PF05580 SpoIVB peptidase S55 F3L01_21520 PF13476 AAA domain F3L01_21525 PF01316 Arginine repressor, DNA binding domain F3L01_21525 PF02863 Arginine repressor, C-terminal domain F3L01_21530 PF01728 FtsJ-like methyltransferase F3L01_21530 PF01479 S4 domain F3L01_21535 PF02780 Transketolase, C-terminal domain F3L01_21535 PF13292 1-deoxy-D-xylulose-5-phosphate synthase F3L01_21535 PF02779 Transketolase, pyrimidine binding domain F3L01_21540 PF00348 Polyprenyl synthetase F3L01_21550 PF02601 Exonuclease VII, large subunit F3L01_21550 PF13742 OB-fold nucleic acid binding domain F3L01_21555 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain F3L01_21555 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain F3L01_21560 PF01029 NusB family F3L01_21565 PF03780 Asp23 family, cell envelope-related function F3L01_21570 PF02785 Biotin carboxylase C-terminal domain F3L01_21570 PF00289 Biotin carboxylase, N-terminal domain F3L01_21570 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain F3L01_21575 PF00364 Biotin-requiring enzyme F3L01_21585 PF12685 SpoIIIAH-like protein F3L01_21595 PF09581 Stage III sporulation protein AF (Spore_III_AF) F3L01_21600 PF09546 Stage III sporulation protein AE (spore_III_AE) F3L01_21605 PF06686 Stage III sporulation protein AC/AD protein family F3L01_21610 PF06686 Stage III sporulation protein AC/AD protein family F3L01_21615 PF09548 Stage III sporulation protein AB (spore_III_AB) F3L01_21640 PF09285 Elongation factor P, C-terminal F3L01_21640 PF08207 Elongation factor P (EF-P) KOW-like domain F3L01_21640 PF01132 Elongation factor P (EF-P) OB domain F3L01_21645 PF01321 Creatinase/Prolidase N-terminal domain F3L01_21645 PF00557 Metallopeptidase family M24 F3L01_21650 PF01220 Dehydroquinase class II F3L01_21655 PF11085 Conserved membrane protein YqhR F3L01_21660 PF07136 Protein of unknown function (DUF1385) F3L01_21670 PF13419 Haloacid dehalogenase-like hydrolase F3L01_21675 PF02742 Iron dependent repressor, metal binding and dimerisation domain F3L01_21675 PF01325 Iron dependent repressor, N-terminal DNA binding domain F3L01_21700 PF03099 Biotin/lipoate A/B protein ligase family F3L01_21705 PF00581 Rhodanese-like domain F3L01_21715 PF00356 Bacterial regulatory proteins, lacI family F3L01_21715 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family F3L01_21725 PF00893 Small Multidrug Resistance protein F3L01_21730 PF00893 Small Multidrug Resistance protein F3L01_21760 PF02347 Glycine cleavage system P-protein F3L01_21765 PF02347 Glycine cleavage system P-protein F3L01_21770 PF02347 Glycine cleavage system P-protein F3L01_21775 PF01571 Aminomethyltransferase folate-binding domain F3L01_21775 PF08669 Glycine cleavage T-protein C-terminal barrel domain F3L01_21780 PF00271 Helicase conserved C-terminal domain F3L01_21780 PF00176 SNF2 family N-terminal domain F3L01_21785 PF11079 Bacterial protein YqhG of unknown function F3L01_21820 PF12833 Helix-turn-helix domain F3L01_21820 PF02805 Metal binding domain of Ada F3L01_21850 PF09859 Oxygenase, catalysing oxidative methylation of damaged DNA F3L01_21855 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain F3L01_21855 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain F3L01_21860 PF02805 Metal binding domain of Ada F3L01_21860 PF12833 Helix-turn-helix domain F3L01_21865 PF02655 ATP-grasp domain F3L01_21865 PF00206 Lyase F3L01_21870 PF07859 alpha/beta hydrolase fold F3L01_21895 PF14038 YqzE-like protein F3L01_21900 PF01202 Shikimate kinase F3L01_21935 PF00482 Type II secretion system (T2SS), protein F F3L01_21940 PF00437 Type II/IV secretion system protein F3L01_21950 PF11117 Protein of unknown function (DUF2626) F3L01_21955 PF00375 Sodium:dicarboxylate symporter family F3L01_21990 PF04101 Glycosyltransferase family 28 C-terminal domain F3L01_21990 PF03033 Glycosyltransferase family 28 N-terminal domain F3L01_21995 PF02574 Homocysteine S-methyltransferase F3L01_21995 PF02310 B12 binding domain F3L01_21995 PF02607 B12 binding domain F3L01_21995 PF02965 Vitamin B12 dependent methionine synthase, activation domain F3L01_21995 PF00809 Pterin binding enzyme F3L01_22000 PF02219 Methylenetetrahydrofolate reductase F3L01_22000 PF02574 Homocysteine S-methyltransferase F3L01_22005 PF01053 Cys/Met metabolism PLP-dependent enzyme F3L01_22010 PF01053 Cys/Met metabolism PLP-dependent enzyme F3L01_22020 PF01022 Bacterial regulatory protein, arsR family F3L01_22030 PF00753 Metallo-beta-lactamase superfamily F3L01_22035 PF10958 Protein of unknown function (DUF2759) F3L01_22040 PF00480 ROK family F3L01_22045 PF06014 Bacterial protein of unknown function (DUF910) F3L01_22050 PF01812 5-formyltetrahydrofolate cyclo-ligase family F3L01_22055 PF00471 Ribosomal protein L33 F3L01_22060 PF00483 Nucleotidyl transferase F3L01_22065 PF01895 PhoU domain F3L01_22070 PF00005 ABC transporter F3L01_22075 PF00528 Binding-protein-dependent transport system inner membrane component F3L01_22080 PF00528 Binding-protein-dependent transport system inner membrane component F3L01_22085 PF12849 PBP superfamily domain F3L01_22095 PF07690 Major Facilitator Superfamily F3L01_22100 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain F3L01_22100 PF02777 Iron/manganese superoxide dismutases, C-terminal domain F3L01_22110 PF06691 Protein of unknown function (DUF1189) F3L01_22120 PF04551 GcpE protein F3L01_22125 PF01475 Ferric uptake regulator family F3L01_22130 PF00950 ABC 3 transport family F3L01_22135 PF00005 ABC transporter F3L01_22140 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) F3L01_22140 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 F3L01_22145 PF11116 Protein of unknown function (DUF2624) F3L01_22150 PF01261 Xylose isomerase-like TIM barrel F3L01_22155 PF00270 DEAD/DEAH box helicase F3L01_22155 PF00271 Helicase conserved C-terminal domain F3L01_22165 PF02401 LytB protein F3L01_22170 PF01784 NIF3 (NGG1p interacting factor 3) F3L01_22175 PF04816 tRNA (adenine(22)-N(1))-methyltransferase F3L01_22180 PF13442 Cytochrome C oxidase, cbb3-type, subunit III F3L01_22185 PF04545 Sigma-70, region 4 F3L01_22185 PF00140 Sigma-70 factor, region 1.2 F3L01_22185 PF03979 Sigma-70 factor, region 1.1 F3L01_22185 PF04542 Sigma-70 region 2 F3L01_22185 PF04539 Sigma-70 region 3 F3L01_22190 PF10410 DnaB-helicase binding domain of primase F3L01_22190 PF08275 DNA primase catalytic core, N-terminal domain F3L01_22190 PF01807 CHC2 zinc finger F3L01_22195 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 F3L01_22200 PF03618 Kinase/pyrophosphorylase F3L01_22205 PF00571 CBS domain F3L01_22205 PF08279 HTH domain F3L01_22210 PF11967 Recombination protein O N terminal F3L01_22210 PF02565 Recombination protein O C terminal F3L01_22220 PF01926 50S ribosome-binding GTPase F3L01_22220 PF07650 KH domain F3L01_22225 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region F3L01_22230 PF01219 Prokaryotic diacylglycerol kinase F3L01_22235 PF02130 Uncharacterized protein family UPF0054 F3L01_22240 PF07697 7TM-HD extracellular F3L01_22240 PF07698 7TM receptor with intracellular HD hydrolase F3L01_22240 PF01966 HD domain F3L01_22245 PF02562 PhoH-like protein F3L01_22250 PF06898 Putative stage IV sporulation protein YqfD F3L01_22255 PF07873 YabP family F3L01_22265 PF09424 Yqey-like protein F3L01_22270 PF01165 Ribosomal protein S21 F3L01_22275 PF01938 TRAM domain F3L01_22275 PF04055 Radical SAM superfamily F3L01_22275 PF00919 Uncharacterized protein family UPF0004 F3L01_22280 PF04452 RNA methyltransferase F3L01_22290 PF01556 DnaJ C terminal domain F3L01_22290 PF00226 DnaJ domain F3L01_22290 PF00684 DnaJ central domain F3L01_22295 PF00012 Hsp70 protein F3L01_22300 PF01025 GrpE F3L01_22305 PF01628 HrcA protein C terminal domain F3L01_22310 PF06969 HemN C-terminal domain F3L01_22310 PF04055 Radical SAM superfamily F3L01_22315 PF01638 HxlR-like helix-turn-helix F3L01_22320 PF03144 Elongation factor Tu domain 2 F3L01_22320 PF00009 Elongation factor Tu GTP binding domain F3L01_22320 PF00679 Elongation factor G C-terminus F3L01_22320 PF06421 GTP-binding protein LepA C-terminus F3L01_22330 PF03418 Germination protease F3L01_22335 PF01649 Ribosomal protein S20 F3L01_22340 PF06144 DNA polymerase III, delta subunit F3L01_22345 PF14141 YqzM-like protein F3L01_22350 PF03772 Competence protein F3L01_22350 PF13567 Domain of unknown function (DUF4131) F3L01_22350 PF00753 Metallo-beta-lactamase superfamily F3L01_22355 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region F3L01_22360 PF10531 SLBB domain F3L01_22365 PF03807 NADP oxidoreductase coenzyme F420-dependent F3L01_22365 PF14748 Pyrroline-5-carboxylate reductase dimerisation F3L01_22370 PF13649 Methyltransferase domain F3L01_22380 PF01966 HD domain F3L01_22385 PF01467 Cytidylyltransferase-like F3L01_22390 PF01985 CRS1 / YhbY (CRM) domain F3L01_22395 PF18317 Shikimate 5'-dehydrogenase C-terminal domain F3L01_22395 PF01488 Shikimate / quinate 5-dehydrogenase F3L01_22395 PF08501 Shikimate dehydrogenase substrate binding domain F3L01_22400 PF01926 50S ribosome-binding GTPase F3L01_22415 PF02666 Phosphatidylserine decarboxylase F3L01_22420 PF04542 Sigma-70 region 2 F3L01_22420 PF04545 Sigma-70, region 4 F3L01_22435 PF00471 Ribosomal protein L33 F3L01_22440 PF00881 Nitroreductase family F3L01_22445 PF04607 Region found in RelA / SpoT proteins F3L01_22455 PF00245 Alkaline phosphatase F3L01_22460 PF00583 Acetyltransferase (GNAT) family F3L01_22465 PF08386 TAP-like protein F3L01_22465 PF00561 alpha/beta hydrolase fold F3L01_22505 PF02225 PA domain F3L01_22505 PF13860 FlgD Ig-like domain F3L01_22505 PF05922 Peptidase inhibitor I9 F3L01_22505 PF00082 Subtilase family F3L01_22510 PF00351 Biopterin-dependent aromatic amino acid hydroxylase F3L01_22520 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily F3L01_22525 PF07681 DoxX F3L01_22560 PF00005 ABC transporter F3L01_22565 PF01032 FecCD transport family F3L01_22570 PF01497 Periplasmic binding protein F3L01_22580 PF14143 YrhC-like protein F3L01_22585 PF00465 Iron-containing alcohol dehydrogenase F3L01_22585 PF00171 Aldehyde dehydrogenase family F3L01_22590 PF01053 Cys/Met metabolism PLP-dependent enzyme F3L01_22595 PF00291 Pyridoxal-phosphate dependent enzyme F3L01_22600 PF01048 Phosphorylase superfamily F3L01_22605 PF08241 Methyltransferase domain F3L01_22620 PF03717 Penicillin-binding Protein dimerisation domain F3L01_22620 PF00905 Penicillin binding protein transpeptidase domain F3L01_22630 PF01272 Transcription elongation factor, GreA/GreB, C-term F3L01_22630 PF03449 Transcription elongation factor, N-terminal F3L01_22635 PF00485 Phosphoribulokinase / Uridine kinase family F3L01_22650 PF01596 O-methyltransferase F3L01_22655 PF02618 YceG-like family F3L01_22660 PF06949 Protein of unknown function (DUF1292) F3L01_22665 PF03652 Holliday junction resolvase F3L01_22670 PF06135 IreB regulatory phosphoprotein F3L01_22675 PF02272 DHHA1 domain F3L01_22675 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain F3L01_22675 PF01411 tRNA synthetases class II (A) F3L01_22685 PF01594 AI-2E family transporter F3L01_22705 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain F3L01_22705 PF14490 Helix-hairpin-helix containing domain F3L01_22705 PF13538 UvrD-like helicase C-terminal domain F3L01_22720 PF00266 Aminotransferase class-V F3L01_22725 PF02082 Transcriptional regulator F3L01_22730 PF05496 Holliday junction DNA helicase RuvB P-loop domain F3L01_22730 PF12002 MgsA AAA+ ATPase C terminal F3L01_22730 PF16193 AAA C-terminal domain F3L01_22750 PF00899 ThiF family F3L01_22755 PF00152 tRNA synthetases class II (D, K and N) F3L01_22755 PF02938 GAD domain F3L01_22755 PF01336 OB-fold nucleic acid binding domain F3L01_22760 PF03129 Anticodon binding domain F3L01_22760 PF13393 Histidyl-tRNA synthetase F3L01_22765 PF02580 D-Tyr-tRNA(Tyr) deacylase F3L01_22770 PF02824 TGS domain F3L01_22770 PF04607 Region found in RelA / SpoT proteins F3L01_22770 PF13291 ACT domain F3L01_22775 PF00156 Phosphoribosyl transferase domain F3L01_22780 PF10141 Single-strand DNA-specific exonuclease, C terminal domain F3L01_22780 PF17768 RecJ OB domain F3L01_22780 PF02272 DHHA1 domain F3L01_22780 PF01368 DHH family F3L01_22785 PF16916 Dimerisation domain of Zinc Transporter F3L01_22785 PF01545 Cation efflux family F3L01_22790 PF02355 Protein export membrane protein F3L01_22790 PF07549 SecD/SecF GG Motif F3L01_22800 PF01943 Polysaccharide biosynthesis protein F3L01_22800 PF14667 Polysaccharide biosynthesis C-terminal domain F3L01_22805 PF04239 Protein of unknown function (DUF421) F3L01_22815 PF02699 Preprotein translocase subunit F3L01_22820 PF01702 Queuine tRNA-ribosyltransferase F3L01_22825 PF02547 Queuosine biosynthesis protein F3L01_22830 PF11146 Protein of unknown function (DUF2905) F3L01_22835 PF17864 RuvB AAA lid domain F3L01_22835 PF05491 RuvB C-terminal winged helix domain F3L01_22835 PF05496 Holliday junction DNA helicase RuvB P-loop domain F3L01_22840 PF07499 RuvA, C-terminal domain F3L01_22840 PF01330 RuvA N terminal domain F3L01_22845 PF01497 Periplasmic binding protein F3L01_22865 PF01476 LysM domain F3L01_22870 PF02445 Quinolinate synthetase A protein F3L01_22875 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain F3L01_22875 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain F3L01_22880 PF00890 FAD binding domain F3L01_22880 PF02910 Fumarate reductase flavoprotein C-term F3L01_22885 PF00266 Aminotransferase class-V F3L01_22890 PF02829 3H domain F3L01_22890 PF08279 HTH domain F3L01_22895 PF03473 MOSC domain F3L01_22895 PF03475 3-alpha domain F3L01_22900 PF01842 ACT domain F3L01_22900 PF00800 Prephenate dehydratase F3L01_22905 PF02687 FtsX-like permease family F3L01_22910 PF02687 FtsX-like permease family F3L01_22915 PF00005 ABC transporter F3L01_22920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3L01_22925 PF00486 Transcriptional regulatory protein, C terminal F3L01_22925 PF00072 Response regulator receiver domain F3L01_22930 PF09269 Domain of unknown function (DUF1967) F3L01_22930 PF01018 GTP1/OBG F3L01_22930 PF01926 50S ribosome-binding GTPase F3L01_22935 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain F3L01_22935 PF14682 Sporulation initiation phospho-transferase B, C-terminal F3L01_22945 PF00829 Ribosomal prokaryotic L21 protein F3L01_22950 PF00575 S1 RNA binding domain F3L01_22950 PF10150 Ribonuclease E/G family F3L01_22955 PF02163 Peptidase family M50 F3L01_22960 PF01551 Peptidase family M23 F3L01_22965 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain F3L01_22970 PF03775 Septum formation inhibitor MinC, C-terminal domain F3L01_22980 PF04085 rod shape-determining protein MreC F3L01_22990 PF04002 RadC-like JAB domain F3L01_22995 PF02545 Maf-like protein F3L01_23005 PF02875 Mur ligase family, glutamate ligase domain F3L01_23005 PF08245 Mur ligase middle domain F3L01_23010 PF10458 Valyl tRNA synthetase tRNA binding arm F3L01_23010 PF08264 Anticodon-binding domain of tRNA F3L01_23010 PF00133 tRNA synthetases class I (I, L, M and V) F3L01_23020 PF01476 LysM domain F3L01_23025 PF00202 Aminotransferase class-III F3L01_23030 PF00490 Delta-aminolevulinic acid dehydratase F3L01_23035 PF02602 Uroporphyrinogen-III synthase HemD F3L01_23040 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain F3L01_23040 PF03900 Porphobilinogen deaminase, C-terminal domain F3L01_23045 PF01578 Cytochrome C assembly protein F3L01_23050 PF01488 Shikimate / quinate 5-dehydrogenase F3L01_23050 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain F3L01_23050 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain F3L01_23055 PF01047 MarR family F3L01_23060 PF02566 OsmC-like protein F3L01_23065 PF01926 50S ribosome-binding GTPase F3L01_23070 PF00004 ATPase family associated with various cellular activities (AAA) F3L01_23070 PF02190 ATP-dependent protease La (LON) substrate-binding domain F3L01_23070 PF05362 Lon protease (S16) C-terminal proteolytic domain F3L01_23075 PF00004 ATPase family associated with various cellular activities (AAA) F3L01_23075 PF05362 Lon protease (S16) C-terminal proteolytic domain F3L01_23080 PF07724 AAA domain (Cdc48 subfamily) F3L01_23080 PF10431 C-terminal, D2-small domain, of ClpB protein F3L01_23080 PF06689 ClpX C4-type zinc finger F3L01_23085 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase F3L01_23085 PF05698 Bacterial trigger factor protein (TF) C-terminus F3L01_23085 PF05697 Bacterial trigger factor protein (TF) F3L01_23100 PF08000 Bacterial PH domain F3L01_23100 PF11724 YvbH-like oligomerisation region F3L01_23120 PF12850 Calcineurin-like phosphoesterase superfamily domain F3L01_23125 PF01725 Ham1 family F3L01_23130 PF03725 3' exoribonuclease family, domain 2 F3L01_23130 PF01138 3' exoribonuclease family, domain 1 F3L01_23135 PF10646 Sporulation and spore germination F3L01_23140 PF01177 Asp/Glu/Hydantoin racemase F3L01_23145 PF07690 Major Facilitator Superfamily F3L01_23155 PF00440 Bacterial regulatory proteins, tetR family F3L01_23165 PF00196 Bacterial regulatory proteins, luxR family F3L01_23170 PF00860 Permease family F3L01_23175 PF07969 Amidohydrolase family F3L01_23180 PF04024 PspC domain F3L01_23185 PF01381 Helix-turn-helix F3L01_23185 PF07883 Cupin domain F3L01_23190 PF13536 Putative multidrug resistance efflux transporter F3L01_23195 PF00230 Major intrinsic protein F3L01_23200 PF02082 Transcriptional regulator F3L01_23210 PF13732 Domain of unknown function (DUF4162) F3L01_23210 PF00005 ABC transporter F3L01_23215 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) F3L01_23220 PF13677 Membrane MotB of proton-channel complex MotA/MotB F3L01_23220 PF00691 OmpA family F3L01_23225 PF01618 MotA/TolQ/ExbB proton channel family F3L01_23230 PF02557 D-alanyl-D-alanine carboxypeptidase F3L01_23235 PF03061 Thioesterase superfamily F3L01_23240 PF13183 4Fe-4S dicluster domain F3L01_23240 PF13085 2Fe-2S iron-sulfur cluster binding domain F3L01_23245 PF02910 Fumarate reductase flavoprotein C-term F3L01_23245 PF00890 FAD binding domain F3L01_23250 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit F3L01_23255 PF10702 Protein of unknown function (DUF2507) F3L01_23260 PF08459 UvrC Helix-hairpin-helix N-terminal F3L01_23260 PF02151 UvrB/uvrC motif F3L01_23260 PF01541 GIY-YIG catalytic domain F3L01_23265 PF00085 Thioredoxin F3L01_23270 PF01012 Electron transfer flavoprotein domain F3L01_23270 PF00766 Electron transfer flavoprotein FAD-binding domain F3L01_23275 PF01012 Electron transfer flavoprotein domain F3L01_23280 PF00378 Enoyl-CoA hydratase/isomerase F3L01_23285 PF00440 Bacterial regulatory proteins, tetR family F3L01_23285 PF08359 YsiA-like protein, C-terminal region F3L01_23290 PF13193 AMP-binding enzyme C-terminal domain F3L01_23290 PF00501 AMP-binding enzyme F3L01_23300 PF01497 Periplasmic binding protein F3L01_23305 PF01032 FecCD transport family F3L01_23320 PF05163 DinB family F3L01_23340 PF00005 ABC transporter F3L01_23345 PF00512 His Kinase A (phospho-acceptor) domain F3L01_23345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3L01_23350 PF00486 Transcriptional regulatory protein, C terminal F3L01_23350 PF00072 Response regulator receiver domain F3L01_23355 PF09962 Uncharacterized conserved protein (DUF2196) F3L01_23360 PF10672 S-adenosylmethionine-dependent methyltransferase F3L01_23360 PF17785 PUA-like domain F3L01_23365 PF03992 Antibiotic biosynthesis monooxygenase F3L01_23370 PF04203 Sortase domain F3L01_23375 PF00005 ABC transporter F3L01_23380 PF01032 FecCD transport family F3L01_23385 PF01497 Periplasmic binding protein F3L01_23390 PF05031 Iron Transport-associated domain F3L01_23400 PF05031 Iron Transport-associated domain F3L01_23405 PF05525 Branched-chain amino acid transport protein F3L01_23410 PF00849 RNA pseudouridylate synthase F3L01_23410 PF01479 S4 domain F3L01_23415 PF00488 MutS domain V F3L01_23415 PF01713 Smr domain F3L01_23420 PF14791 DNA polymerase beta thumb F3L01_23420 PF02811 PHP domain F3L01_23420 PF14716 Helix-hairpin-helix domain F3L01_23425 PF02674 Colicin V production protein F3L01_23430 PF05164 Cell division protein ZapA F3L01_23435 PF11858 Domain of unknown function (DUF3378) F3L01_23435 PF01351 Ribonuclease HII F3L01_23455 PF00152 tRNA synthetases class II (D, K and N) F3L01_23455 PF01336 OB-fold nucleic acid binding domain F3L01_23460 PF01588 Putative tRNA binding domain F3L01_23460 PF03147 Ferredoxin-fold anticodon binding domain F3L01_23460 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain F3L01_23460 PF03484 tRNA synthetase B5 domain F3L01_23460 PF03483 B3/4 domain F3L01_23465 PF01409 tRNA synthetases class II core domain (F) F3L01_23465 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain F3L01_23470 PF08032 RNA 2'-O ribose methyltransferase substrate binding F3L01_23470 PF00588 SpoU rRNA Methylase family F3L01_23475 PF14098 Small, acid-soluble spore protein I F3L01_23480 PF01966 HD domain F3L01_23500 PF07690 Major Facilitator Superfamily F3L01_23510 PF16859 Tetracyclin repressor-like, C-terminal domain F3L01_23510 PF00440 Bacterial regulatory proteins, tetR family F3L01_23515 PF05343 M42 glutamyl aminopeptidase F3L01_23525 PF00453 Ribosomal protein L20 F3L01_23530 PF01632 Ribosomal protein L35 F3L01_23535 PF05198 Translation initiation factor IF-3, N-terminal domain F3L01_23535 PF00707 Translation initiation factor IF-3, C-terminal domain F3L01_23540 PF03129 Anticodon binding domain F3L01_23540 PF02824 TGS domain F3L01_23540 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) F3L01_23540 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain F3L01_23545 PF08812 YtxC-like family F3L01_23550 PF13783 Domain of unknown function (DUF4177) F3L01_23565 PF01695 IstB-like ATP binding protein F3L01_23565 PF07319 Primosomal protein DnaI N-terminus F3L01_23570 PF07261 Replication initiation and membrane attachment F3L01_23575 PF03477 ATP cone domain F3L01_23580 PF02675 S-adenosylmethionine decarboxylase F3L01_23585 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain F3L01_23585 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain F3L01_23590 PF01121 Dephospho-CoA kinase F3L01_23595 PF02659 Putative manganese efflux pump F3L01_23600 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain F3L01_23600 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain F3L01_23600 PF06827 Zinc finger found in FPG and IleRS F3L01_23605 PF01367 5'-3' exonuclease, C-terminal SAM fold F3L01_23605 PF00476 DNA polymerase family A F3L01_23605 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain F3L01_23610 PF00989 PAS fold F3L01_23610 PF16736 Single Cache-like F3L01_23610 PF00512 His Kinase A (phospho-acceptor) domain F3L01_23610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3L01_23615 PF00072 Response regulator receiver domain F3L01_23615 PF00486 Transcriptional regulatory protein, C terminal F3L01_23630 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain F3L01_23630 PF00056 lactate/malate dehydrogenase, NAD binding domain F3L01_23635 PF00180 Isocitrate/isopropylmalate dehydrogenase F3L01_23640 PF00285 Citrate synthase, C-terminal domain F3L01_23650 PF04284 Protein of unknown function (DUF441) F3L01_23655 PF01594 AI-2E family transporter F3L01_23660 PF04186 FxsA cytoplasmic membrane protein F3L01_23665 PF02887 Pyruvate kinase, alpha/beta domain F3L01_23665 PF00391 PEP-utilising enzyme, mobile domain F3L01_23665 PF00224 Pyruvate kinase, barrel domain F3L01_23670 PF00365 Phosphofructokinase F3L01_23675 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit F3L01_23680 PF01039 Carboxyl transferase domain F3L01_23680 PF17848 Acetyl-coA carboxylase zinc finger domain F3L01_23685 PF00392 Bacterial regulatory proteins, gntR family F3L01_23690 PF03949 Malic enzyme, NAD binding domain F3L01_23690 PF00390 Malic enzyme, N-terminal domain F3L01_23695 PF14579 Helix-hairpin-helix motif F3L01_23695 PF02811 PHP domain F3L01_23695 PF01336 OB-fold nucleic acid binding domain F3L01_23695 PF17657 Bacterial DNA polymerase III alpha subunit finger domain F3L01_23695 PF07733 Bacterial DNA polymerase III alpha NTPase domain F3L01_23700 PF14034 Sporulation protein YtrH F3L01_23710 PF02272 DHHA1 domain F3L01_23710 PF01368 DHH family F3L01_23715 PF14007 YtpI-like protein F3L01_23725 PF00392 Bacterial regulatory proteins, gntR family F3L01_23725 PF00571 CBS domain F3L01_23725 PF03061 Thioesterase superfamily F3L01_23725 PF07085 DRTGG domain F3L01_23740 PF01321 Creatinase/Prolidase N-terminal domain F3L01_23740 PF00557 Metallopeptidase family M24 F3L01_23775 PF12746 GNAT acetyltransferase F3L01_23780 PF07883 Cupin domain F3L01_23790 PF05222 Alanine dehydrogenase/PNT, N-terminal domain F3L01_23790 PF01262 Alanine dehydrogenase/PNT, C-terminal domain F3L01_23800 PF00582 Universal stress protein family F3L01_23820 PF14698 Argininosuccinate lyase C-terminal F3L01_23820 PF00206 Lyase F3L01_23825 PF00764 Arginosuccinate synthase F3L01_23840 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 F3L01_23840 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) F3L01_23845 PF12787 EcsC protein family F3L01_23860 PF00871 Acetokinase family F3L01_23865 PF02384 N-6 DNA Methylase F3L01_23870 PF08534 Redoxin F3L01_23875 PF09579 Sporulation protein YtfJ (Spore_YtfJ) F3L01_23885 PF01513 ATP-NAD kinase F3L01_23890 PF07969 Amidohydrolase family F3L01_23900 PF13193 AMP-binding enzyme C-terminal domain F3L01_23900 PF00501 AMP-binding enzyme F3L01_23905 PF00269 Small, acid-soluble spore proteins, alpha/beta type F3L01_23910 PF02926 THUMP domain F3L01_23910 PF02568 Thiamine biosynthesis protein (ThiI) F3L01_23915 PF00266 Aminotransferase class-V F3L01_23920 PF06160 Septation ring formation regulator, EzrA F3L01_23925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3L01_23925 PF03466 LysR substrate binding domain F3L01_23930 PF00892 EamA-like transporter family F3L01_23935 PF00440 Bacterial regulatory proteins, tetR family F3L01_23940 PF13185 GAF domain F3L01_23945 PF01053 Cys/Met metabolism PLP-dependent enzyme F3L01_23950 PF00163 Ribosomal protein S4/S9 N-terminal domain F3L01_23950 PF01479 S4 domain F3L01_23965 PF04740 LXG domain of WXG superfamily F3L01_23965 PF14436 Bacterial EndoU nuclease F3L01_24010 PF01479 S4 domain F3L01_24010 PF00579 tRNA synthetases class I (W and Y) F3L01_24015 PF14602 Hexapeptide repeat of succinyl-transferase F3L01_24015 PF12464 Maltose acetyltransferase F3L01_24020 PF13193 AMP-binding enzyme C-terminal domain F3L01_24020 PF00501 AMP-binding enzyme F3L01_24025 PF00583 Acetyltransferase (GNAT) family F3L01_24030 PF00571 CBS domain F3L01_24035 PF00850 Histone deacetylase domain F3L01_24050 PF00486 Transcriptional regulatory protein, C terminal F3L01_24050 PF00072 Response regulator receiver domain F3L01_24055 PF13426 PAS domain F3L01_24055 PF00512 His Kinase A (phospho-acceptor) domain F3L01_24055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3L01_24055 PF00672 HAMP domain F3L01_24060 PF12796 Ankyrin repeats (3 copies) F3L01_24065 PF01408 Oxidoreductase family, NAD-binding Rossmann fold F3L01_24070 PF01741 Large-conductance mechanosensitive channel, MscL F3L01_24085 PF00356 Bacterial regulatory proteins, lacI family F3L01_24090 PF01817 Chorismate mutase type II F3L01_24090 PF00793 DAHP synthetase I family F3L01_24095 PF07537 CamS sex pheromone cAM373 precursor F3L01_24100 PF11009 Protein of unknown function (DUF2847) F3L01_24110 PF02073 Thermophilic metalloprotease (M29) F3L01_24135 PF13302 Acetyltransferase (GNAT) domain F3L01_24140 PF02875 Mur ligase family, glutamate ligase domain F3L01_24140 PF08245 Mur ligase middle domain F3L01_24140 PF01225 Mur ligase family, catalytic domain F3L01_24155 PF01520 N-acetylmuramoyl-L-alanine amidase F3L01_24155 PF08239 Bacterial SH3 domain F3L01_24165 PF01588 Putative tRNA binding domain F3L01_24165 PF14794 Domain of unknown function (DUF4479) F3L01_24170 PF07285 Protein of unknown function (DUF1444) F3L01_24175 PF00085 Thioredoxin F3L01_24180 PF01931 Protein of unknown function DUF84 F3L01_24185 PF05343 M42 glutamyl aminopeptidase F3L01_24195 PF00753 Metallo-beta-lactamase superfamily F3L01_24200 PF02390 Putative methyltransferase F3L01_24205 PF14165 YtzH-like protein F3L01_24210 PF01636 Phosphotransferase enzyme family F3L01_24215 PF00128 Alpha amylase, catalytic domain F3L01_24215 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) F3L01_24215 PF17999 Pullulanase N1-terminal domain F3L01_24220 PF02834 LigT like Phosphoesterase F3L01_24225 PF01546 Peptidase family M20/M25/M40 F3L01_24230 PF08220 DeoR-like helix-turn-helix domain F3L01_24235 PF01479 S4 domain F3L01_24235 PF00849 RNA pseudouridylate synthase F3L01_24240 PF01943 Polysaccharide biosynthesis protein F3L01_24240 PF14667 Polysaccharide biosynthesis C-terminal domain F3L01_24250 PF07690 Major Facilitator Superfamily F3L01_24255 PF01022 Bacterial regulatory protein, arsR family F3L01_24260 PF08327 Activator of Hsp90 ATPase homolog 1-like protein F3L01_24275 PF10957 Sporulation protein Cse60 F3L01_24285 PF02559 CarD-like/TRCF domain F3L01_24295 PF06800 Sugar transport protein F3L01_24310 PF02391 MoaE protein F3L01_24315 PF03205 Molybdopterin guanine dinucleotide synthesis protein B F3L01_24320 PF03453 MoeA N-terminal region (domain I and II) F3L01_24320 PF00994 Probable molybdopterin binding domain F3L01_24320 PF03454 MoeA C-terminal region (domain IV) F3L01_24325 PF01967 MoaC family F3L01_24330 PF00899 ThiF family F3L01_24335 PF06463 Molybdenum Cofactor Synthesis C F3L01_24335 PF04055 Radical SAM superfamily F3L01_24360 PF00581 Rhodanese-like domain F3L01_24370 PF00561 alpha/beta hydrolase fold F3L01_24375 PF03323 Bacillus/Clostridium GerA spore germination protein F3L01_24380 PF03845 Spore germination protein F3L01_24405 PF13603 Leucyl-tRNA synthetase, Domain 2 F3L01_24405 PF00133 tRNA synthetases class I (I, L, M and V) F3L01_24405 PF08264 Anticodon-binding domain of tRNA F3L01_24405 PF09334 tRNA synthetases class I (M) F3L01_24410 PF07690 Major Facilitator Superfamily F3L01_24415 PF00999 Sodium/hydrogen exchanger family F3L01_24420 PF02080 TrkA-C domain F3L01_24425 PF00589 Phage integrase family F3L01_24440 PF00005 ABC transporter F3L01_24445 PF07786 Protein of unknown function (DUF1624) F3L01_24445 PF04235 Protein of unknown function (DUF418) F3L01_24455 PF10732 Protein of unknown function (DUF2524) F3L01_24460 PF16199 Radical_SAM C-terminal domain F3L01_24460 PF04055 Radical SAM superfamily F3L01_24465 PF06962 Putative rRNA methylase F3L01_24475 PF00005 ABC transporter F3L01_24485 PF01177 Asp/Glu/Hydantoin racemase F3L01_24505 PF10776 Protein of unknown function (DUF2600) F3L01_24510 PF12146 Serine aminopeptidase, S33 F3L01_24515 PF00132 Bacterial transferase hexapeptide (six repeats) F3L01_24520 PF01569 PAP2 superfamily F3L01_24525 PF13439 Glycosyltransferase Family 4 F3L01_24525 PF00534 Glycosyl transferases group 1 F3L01_24530 PF12804 MobA-like NTP transferase domain F3L01_24535 PF00994 Probable molybdopterin binding domain F3L01_24545 PF13302 Acetyltransferase (GNAT) domain F3L01_24550 PF02772 S-adenosylmethionine synthetase, central domain F3L01_24550 PF00438 S-adenosylmethionine synthetase, N-terminal domain F3L01_24550 PF02773 S-adenosylmethionine synthetase, C-terminal domain F3L01_24555 PF01293 Phosphoenolpyruvate carboxykinase F3L01_24595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3L01_24595 PF00512 His Kinase A (phospho-acceptor) domain F3L01_24595 PF00989 PAS fold F3L01_24595 PF13188 PAS domain F3L01_24595 PF13426 PAS domain F3L01_24600 PF00512 His Kinase A (phospho-acceptor) domain F3L01_24600 PF02743 Cache domain F3L01_24600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3L01_24615 PF00561 alpha/beta hydrolase fold F3L01_24615 PF08386 TAP-like protein F3L01_24620 PF00884 Sulfatase F3L01_24640 PF00005 ABC transporter F3L01_24645 PF00528 Binding-protein-dependent transport system inner membrane component F3L01_24670 PF00293 NUDIX domain F3L01_24700 PF02664 S-Ribosylhomocysteinase (LuxS) F3L01_24705 PF01809 Putative membrane protein insertion efficiency factor F3L01_24710 PF00484 Carbonic anhydrase F3L01_24715 PF01654 Cytochrome bd terminal oxidase subunit I F3L01_24720 PF02322 Cytochrome bd terminal oxidase subunit II F3L01_24725 PF10676 Spore germination protein gerPA/gerPF F3L01_24735 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 F3L01_24735 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) F3L01_24755 PF04012 PspA/IM30 family F3L01_24770 PF07670 Nucleoside recognition F3L01_24770 PF02421 Ferrous iron transport protein B F3L01_24770 PF17910 FeoB cytosolic helical domain F3L01_24770 PF07664 Ferrous iron transport protein B C terminus F3L01_24780 PF09515 Thiamine transporter protein (Thia_YuaJ) F3L01_24785 PF00672 HAMP domain F3L01_24785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3L01_24785 PF00512 His Kinase A (phospho-acceptor) domain F3L01_24790 PF00072 Response regulator receiver domain F3L01_24790 PF00486 Transcriptional regulatory protein, C terminal F3L01_24820 PF00781 Diacylglycerol kinase catalytic domain F3L01_24860 PF02687 FtsX-like permease family F3L01_24865 PF00005 ABC transporter F3L01_24880 PF09335 SNARE associated Golgi protein F3L01_24885 PF00398 Ribosomal RNA adenine dimethylase F3L01_24890 PF02687 FtsX-like permease family F3L01_24895 PF00005 ABC transporter F3L01_24900 PF12833 Helix-turn-helix domain F3L01_24900 PF06445 GyrI-like small molecule binding domain F3L01_24905 PF07853 Protein of unknown function (DUF1648) F3L01_24905 PF13630 SdpI/YhfL protein family F3L01_24910 PF01022 Bacterial regulatory protein, arsR family F3L01_24915 PF00486 Transcriptional regulatory protein, C terminal F3L01_24915 PF00072 Response regulator receiver domain F3L01_24920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3L01_24925 PF02687 FtsX-like permease family F3L01_24930 PF02687 FtsX-like permease family F3L01_24935 PF00005 ABC transporter F3L01_24940 PF02687 FtsX-like permease family F3L01_24950 PF13977 BetI-type transcriptional repressor, C-terminal F3L01_24950 PF00440 Bacterial regulatory proteins, tetR family F3L01_24960 PF02447 GntP family permease F3L01_24965 PF07702 UTRA domain F3L01_24965 PF00392 Bacterial regulatory proteins, gntR family F3L01_24975 PF07071 KDGP aldolase F3L01_24980 PF03841 L-seryl-tRNA selenium transferase F3L01_24985 PF01979 Amidohydrolase family F3L01_24990 PF02557 D-alanyl-D-alanine carboxypeptidase F3L01_24995 PF00512 His Kinase A (phospho-acceptor) domain F3L01_24995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3L01_25000 PF00486 Transcriptional regulatory protein, C terminal F3L01_25000 PF00072 Response regulator receiver domain F3L01_25010 PF13378 Enolase C-terminal domain-like F3L01_25010 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain F3L01_25015 PF13193 AMP-binding enzyme C-terminal domain F3L01_25015 PF00501 AMP-binding enzyme F3L01_25020 PF00378 Enoyl-CoA hydratase/isomerase F3L01_25025 PF00561 alpha/beta hydrolase fold F3L01_25030 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain F3L01_25030 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain F3L01_25030 PF16582 Middle domain of thiamine pyrophosphate F3L01_25035 PF00425 chorismate binding enzyme F3L01_25040 PF01040 UbiA prenyltransferase family F3L01_25045 PF01258 Prokaryotic dksA/traR C4-type zinc finger F3L01_25050 PF00313 'Cold-shock' DNA-binding domain F3L01_25065 PF00343 Carbohydrate phosphorylase F3L01_25070 PF00534 Glycosyl transferases group 1 F3L01_25070 PF08323 Starch synthase catalytic domain F3L01_25075 PF00483 Nucleotidyl transferase F3L01_25080 PF00483 Nucleotidyl transferase F3L01_25085 PF02806 Alpha amylase, C-terminal all-beta domain F3L01_25085 PF00128 Alpha amylase, catalytic domain F3L01_25085 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) F3L01_25095 PF00082 Subtilase family F3L01_25095 PF13860 FlgD Ig-like domain F3L01_25095 PF05922 Peptidase inhibitor I9 F3L01_25095 PF02225 PA domain F3L01_25105 PF00056 lactate/malate dehydrogenase, NAD binding domain F3L01_25105 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain F3L01_25200 PF05697 Bacterial trigger factor protein (TF) F3L01_25200 PF05698 Bacterial trigger factor protein (TF) C-terminus F3L01_25235 PF02308 MgtC family F3L01_25240 PF07885 Ion channel F3L01_25240 PF02254 TrkA-N domain F3L01_25245 PF08868 YugN-like family F3L01_25250 PF00342 Phosphoglucose isomerase F3L01_25260 PF04070 Domain of unknown function (DUF378) F3L01_25265 PF00575 S1 RNA binding domain F3L01_25270 PF00155 Aminotransferase class I and II F3L01_25275 PF01037 Lrp/AsnC ligand binding domain F3L01_25280 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain F3L01_25280 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain F3L01_25285 PF00561 alpha/beta hydrolase fold F3L01_25285 PF08386 TAP-like protein F3L01_25295 PF00155 Aminotransferase class I and II F3L01_25305 PF08810 Kinase associated protein B F3L01_25310 PF00929 Exonuclease F3L01_25315 PF03600 Citrate transporter F3L01_25330 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) F3L01_25330 PF03129 Anticodon binding domain F3L01_25335 PF03061 Thioesterase superfamily F3L01_25345 PF02632 BioY family F3L01_25350 PF00483 Nucleotidyl transferase F3L01_25355 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III F3L01_25355 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II F3L01_25355 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain F3L01_25355 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I F3L01_25360 PF02457 DisA bacterial checkpoint controller nucleotide-binding F3L01_25360 PF10372 Bacterial membrane-spanning protein N-terminus F3L01_25365 PF00883 Cytosol aminopeptidase family, catalytic domain F3L01_25365 PF02789 Cytosol aminopeptidase family, N-terminal domain F3L01_25370 PF06725 3D domain F3L01_25380 PF13344 Haloacid dehalogenase-like hydrolase F3L01_25380 PF00293 NUDIX domain F3L01_25385 PF07992 Pyridine nucleotide-disulphide oxidoreductase F3L01_25390 PF07992 Pyridine nucleotide-disulphide oxidoreductase F3L01_25400 PF06445 GyrI-like small molecule binding domain F3L01_25415 PF04463 Protein of unknown function (DUF523) F3L01_25435 PF01521 Iron-sulphur cluster biosynthesis F3L01_25440 PF01678 Diaminopimelate epimerase F3L01_25445 PF07293 Protein of unknown function (DUF1450) F3L01_25450 PF07992 Pyridine nucleotide-disulphide oxidoreductase F3L01_25460 PF03412 Peptidase C39 family F3L01_25460 PF00005 ABC transporter F3L01_25460 PF00664 ABC transporter transmembrane region F3L01_25465 PF03649 Uncharacterised protein family (UPF0014) F3L01_25470 PF08274 PhnA Zinc-Ribbon F3L01_25470 PF03831 PhnA domain F3L01_25515 PF07315 Protein of unknown function (DUF1462) F3L01_25520 PF01106 NifU-like domain F3L01_25535 PF04608 Phosphatidylglycerophosphatase A F3L01_25555 PF15608 PELOTA RNA binding domain F3L01_25555 PF11202 Phosphoribosyl transferase (PRTase) F3L01_25565 PF02525 Flavodoxin-like fold F3L01_25575 PF13344 Haloacid dehalogenase-like hydrolase F3L01_25585 PF01934 Protein of unknown function DUF86 F3L01_25590 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded F3L01_25615 PF06265 Protein of unknown function (DUF1027) F3L01_25620 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) F3L01_25625 PF07739 TipAS antibiotic-recognition domain F3L01_25625 PF13411 MerR HTH family regulatory protein F3L01_25630 PF10086 YhfC intramembrane metalloprotease F3L01_25650 PF04055 Radical SAM superfamily F3L01_25650 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family F3L01_25655 PF01551 Peptidase family M23 F3L01_25660 PF09560 Sporulation protein YunB (Spo_YunB) F3L01_25665 PF08827 Domain of unknown function (DUF1805) F3L01_25670 PF02872 5'-nucleotidase, C-terminal domain F3L01_25675 PF01458 Uncharacterized protein family (UPF0051) F3L01_25680 PF01592 NifU-like N terminal domain F3L01_25685 PF00266 Aminotransferase class-V F3L01_25690 PF01458 Uncharacterized protein family (UPF0051) F3L01_25695 PF00005 ABC transporter F3L01_25700 PF03180 NLPA lipoprotein F3L01_25705 PF03180 NLPA lipoprotein F3L01_25710 PF00528 Binding-protein-dependent transport system inner membrane component F3L01_25715 PF09383 NIL domain F3L01_25715 PF00005 ABC transporter F3L01_25725 PF00085 Thioredoxin F3L01_25730 PF01751 Toprim domain F3L01_25735 PF01597 Glycine cleavage H-protein F3L01_25740 PF03960 ArsC family F3L01_25760 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain F3L01_25760 PF00056 lactate/malate dehydrogenase, NAD binding domain F3L01_25780 PF13305 Tetracyclin repressor-like, C-terminal domain F3L01_25780 PF00440 Bacterial regulatory proteins, tetR family F3L01_25785 PF00753 Metallo-beta-lactamase superfamily F3L01_25790 PF02771 Acyl-CoA dehydrogenase, N-terminal domain F3L01_25790 PF02770 Acyl-CoA dehydrogenase, middle domain F3L01_25790 PF00441 Acyl-CoA dehydrogenase, C-terminal domain F3L01_25795 PF02803 Thiolase, C-terminal domain F3L01_25795 PF00108 Thiolase, N-terminal domain F3L01_25800 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain F3L01_25800 PF00378 Enoyl-CoA hydratase/isomerase F3L01_25800 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain F3L01_25805 PF14115 YuzL-like protein F3L01_25810 PF00768 D-alanyl-D-alanine carboxypeptidase F3L01_25810 PF07943 Penicillin-binding protein 5, C-terminal domain F3L01_25815 PF01619 Proline dehydrogenase F3L01_25820 PF10835 Protein of unknown function (DUF2573) F3L01_25825 PF01910 Thiamine-binding protein F3L01_25830 PF00672 HAMP domain F3L01_25830 PF02743 Cache domain F3L01_25830 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F3L01_25840 PF07690 Major Facilitator Superfamily F3L01_25855 PF13520 Amino acid permease F3L01_25875 PF02096 60Kd inner membrane protein F3L01_25885 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) F3L01_25885 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 F3L01_25925 PF09335 SNARE associated Golgi protein F3L01_25935 PF03734 L,D-transpeptidase catalytic domain F3L01_25935 PF17969 L,D-transpeptidase C-terminal domain F3L01_25940 PF00486 Transcriptional regulatory protein, C terminal F3L01_25940 PF00072 Response regulator receiver domain F3L01_25945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3L01_25945 PF00989 PAS fold F3L01_25945 PF00512 His Kinase A (phospho-acceptor) domain F3L01_25945 PF16736 Single Cache-like F3L01_25955 PF08264 Anticodon-binding domain of tRNA F3L01_25955 PF09334 tRNA synthetases class I (M) F3L01_25965 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F3L01_25965 PF00672 HAMP domain F3L01_25965 PF02743 Cache domain F3L01_25980 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F3L01_25980 PF00672 HAMP domain F3L01_25980 PF02743 Cache domain F3L01_25985 PF01883 Iron-sulfur cluster assembly protein F3L01_25990 PF07504 Fungalysin/Thermolysin Propeptide Motif F3L01_25990 PF03413 Peptidase propeptide and YPEB domain F3L01_25990 PF01447 Thermolysin metallopeptidase, catalytic domain F3L01_25990 PF02868 Thermolysin metallopeptidase, alpha-helical domain F3L01_25995 PF17954 Quercetinase C-terminal cupin domain F3L01_25995 PF02678 Pirin F3L01_26000 PF01047 MarR family F3L01_26010 PF09335 SNARE associated Golgi protein F3L01_26015 PF00999 Sodium/hydrogen exchanger family F3L01_26020 PF02080 TrkA-C domain F3L01_26025 PF01235 Sodium:alanine symporter family F3L01_26035 PF00210 Ferritin-like domain F3L01_26055 PF03641 Possible lysine decarboxylase F3L01_26065 PF00210 Ferritin-like domain F3L01_26070 PF07786 Protein of unknown function (DUF1624) F3L01_26070 PF04235 Protein of unknown function (DUF418) F3L01_26075 PF07662 Na+ dependent nucleoside transporter C-terminus F3L01_26075 PF01773 Na+ dependent nucleoside transporter N-terminus F3L01_26080 PF07662 Na+ dependent nucleoside transporter C-terminus F3L01_26080 PF01773 Na+ dependent nucleoside transporter N-terminus F3L01_26085 PF01235 Sodium:alanine symporter family F3L01_26090 PF01235 Sodium:alanine symporter family F3L01_26095 PF13460 NAD(P)H-binding F3L01_26110 PF00248 Aldo/keto reductase family F3L01_26115 PF07690 Major Facilitator Superfamily F3L01_26120 PF01638 HxlR-like helix-turn-helix F3L01_26125 PF07849 Protein of unknown function (DUF1641) F3L01_26130 PF07992 Pyridine nucleotide-disulphide oxidoreductase F3L01_26135 PF00579 tRNA synthetases class I (W and Y) F3L01_26135 PF01479 S4 domain F3L01_26140 PF01565 FAD binding domain F3L01_26140 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain F3L01_26160 PF02537 CrcB-like protein, Camphor Resistance (CrcB) F3L01_26165 PF02537 CrcB-like protein, Camphor Resistance (CrcB) F3L01_26175 PF13302 Acetyltransferase (GNAT) domain F3L01_26185 PF06146 Phosphate-starvation-inducible E F3L01_26220 PF01289 Thiol-activated cytolysin F3L01_26220 PF17440 Thiol-activated cytolysin beta sandwich domain F3L01_26225 PF00005 ABC transporter F3L01_26230 PF01032 FecCD transport family F3L01_26235 PF01032 FecCD transport family F3L01_26245 PF00072 Response regulator receiver domain F3L01_26245 PF00486 Transcriptional regulatory protein, C terminal F3L01_26250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3L01_26255 PF00072 Response regulator receiver domain F3L01_26255 PF00486 Transcriptional regulatory protein, C terminal F3L01_26260 PF00005 ABC transporter F3L01_26265 PF02687 FtsX-like permease family F3L01_26280 PF04235 Protein of unknown function (DUF418) F3L01_26280 PF07786 Protein of unknown function (DUF1624) F3L01_26285 PF00005 ABC transporter F3L01_26310 PF01668 SmpB protein F3L01_26325 PF08206 Ribonuclease B OB domain F3L01_26325 PF17876 Cold shock domain F3L01_26325 PF00575 S1 RNA binding domain F3L01_26325 PF00773 RNB domain F3L01_26330 PF12146 Serine aminopeptidase, S33 F3L01_26335 PF03840 Preprotein translocase SecG subunit F3L01_26340 PF04172 LrgB-like family F3L01_26345 PF03788 LrgA family F3L01_26350 PF01156 Inosine-uridine preferring nucleoside hydrolase F3L01_26355 PF03952 Enolase, N-terminal domain F3L01_26355 PF00113 Enolase, C-terminal TIM barrel domain F3L01_26360 PF06415 BPG-independent PGAM N-terminus (iPGM_N) F3L01_26360 PF01676 Metalloenzyme superfamily F3L01_26365 PF00121 Triosephosphate isomerase F3L01_26370 PF00162 Phosphoglycerate kinase F3L01_26375 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain F3L01_26375 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain F3L01_26380 PF04198 Putative sugar-binding domain F3L01_26390 PF04963 Sigma-54 factor, core binding domain F3L01_26390 PF04552 Sigma-54, DNA binding domain F3L01_26390 PF00309 Sigma-54 factor, Activator interacting domain (AID) F3L01_26630 PF00589 Phage integrase family F3L01_26630 PF14659 Phage integrase, N-terminal SAM-like domain F3L01_26650 PF03862 SpoVAC/SpoVAEB sporulation membrane protein F3L01_26655 PF07451 Stage V sporulation protein AD (SpoVAD) F3L01_26660 PF03862 SpoVAC/SpoVAEB sporulation membrane protein F3L01_26670 PF04239 Protein of unknown function (DUF421) F3L01_26675 PF00574 Clp protease F3L01_26680 PF00381 PTS HPr component phosphorylation site F3L01_26685 PF02650 WhiA C-terminal HTH domain F3L01_26685 PF14527 WhiA LAGLIDADG-like domain F3L01_26685 PF10298 WhiA N-terminal LAGLIDADG-like domain F3L01_26690 PF01933 Uncharacterised protein family UPF0052 F3L01_26695 PF03668 P-loop ATPase protein family F3L01_26700 PF00293 NUDIX domain F3L01_26710 PF07992 Pyridine nucleotide-disulphide oxidoreductase F3L01_26720 PF14602 Hexapeptide repeat of succinyl-transferase F3L01_26725 PF13419 Haloacid dehalogenase-like hydrolase F3L01_26730 PF01790 Prolipoprotein diacylglyceryl transferase F3L01_26735 PF02603 HPr Serine kinase N terminus F3L01_26735 PF07475 HPr Serine kinase C-terminal domain F3L01_26740 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV F3L01_26745 PF00005 ABC transporter F3L01_26745 PF17760 UvrA interaction domain F3L01_26745 PF17755 UvrA DNA-binding domain F3L01_26750 PF04851 Type III restriction enzyme, res subunit F3L01_26750 PF02151 UvrB/uvrC motif F3L01_26750 PF12344 Ultra-violet resistance protein B F3L01_26750 PF00271 Helicase conserved C-terminal domain F3L01_26750 PF17757 UvrB interaction domain F3L01_26765 PF07739 TipAS antibiotic-recognition domain F3L01_26765 PF13411 MerR HTH family regulatory protein F3L01_26780 PF03601 Conserved hypothetical protein 698 F3L01_26785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3L01_26785 PF03466 LysR substrate binding domain F3L01_26790 PF09278 MerR, DNA binding F3L01_26790 PF00376 MerR family regulatory protein F3L01_26795 PF03358 NADPH-dependent FMN reductase F3L01_26805 PF01906 Putative heavy-metal-binding F3L01_26810 PF00664 ABC transporter transmembrane region F3L01_26810 PF00005 ABC transporter F3L01_26815 PF17820 PDZ domain F3L01_26820 PF01471 Putative peptidoglycan binding domain F3L01_26820 PF03572 Peptidase family S41 F3L01_26820 PF17820 PDZ domain F3L01_26825 PF18075 FtsX extracellular domain F3L01_26825 PF02687 FtsX-like permease family F3L01_26830 PF00005 ABC transporter F3L01_26840 PF13442 Cytochrome C oxidase, cbb3-type, subunit III F3L01_26850 PF01043 SecA preprotein cross-linking domain F3L01_26850 PF02810 SEC-C motif F3L01_26850 PF07517 SecA DEAD-like domain F3L01_26850 PF07516 SecA Wing and Scaffold domain F3L01_26860 PF00005 ABC transporter F3L01_26890 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus F3L01_26890 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein F3L01_26895 PF00313 'Cold-shock' DNA-binding domain F3L01_26905 PF04851 Type III restriction enzyme, res subunit F3L01_26905 PF00271 Helicase conserved C-terminal domain F3L01_26910 PF00877 NlpC/P60 family F3L01_26915 PF01638 HxlR-like helix-turn-helix F3L01_26920 PF02645 Uncharacterised protein, DegV family COG1307 F3L01_26925 PF09186 Domain of unknown function (DUF1949) F3L01_26925 PF01205 Uncharacterized protein family UPF0029 F3L01_26930 PF03816 Cell envelope-related transcriptional attenuator domain F3L01_26935 PF02350 UDP-N-acetylglucosamine 2-epimerase F3L01_26940 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain F3L01_26940 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain F3L01_26940 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain F3L01_26945 PF00953 Glycosyl transferase family 4 F3L01_26950 PF01522 Polysaccharide deacetylase F3L01_26955 PF00874 PRD domain F3L01_26955 PF00158 Sigma-54 interaction domain F3L01_26955 PF03610 PTS system fructose IIA component F3L01_26965 PF02417 Chromate transporter F3L01_26970 PF04794 YdjC-like protein F3L01_26975 PF11975 Family 4 glycosyl hydrolase C-terminal domain F3L01_26975 PF02056 Family 4 glycosyl hydrolase F3L01_26980 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit F3L01_26985 PF02378 Phosphotransferase system, EIIC F3L01_26990 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit F3L01_27000 PF02675 S-adenosylmethionine decarboxylase F3L01_27005 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit F3L01_27010 PF02378 Phosphotransferase system, EIIC F3L01_27015 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit F3L01_27020 PF00375 Sodium:dicarboxylate symporter family F3L01_27040 PF03466 LysR substrate binding domain F3L01_27040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3L01_27050 PF01654 Cytochrome bd terminal oxidase subunit I F3L01_27055 PF02322 Cytochrome bd terminal oxidase subunit II F3L01_27060 PF02040 Arsenical pump membrane protein F3L01_27065 PF13667 ThiC-associated domain F3L01_27065 PF01964 Radical SAM ThiC family F3L01_27070 PF02652 L-lactate permease F3L01_27080 PF09988 Uncharacterized metal-binding protein (DUF2227) F3L01_27095 PF00884 Sulfatase F3L01_27100 PF01063 Amino-transferase class IV F3L01_27105 PF01476 LysM domain F3L01_27105 PF00877 NlpC/P60 family F3L01_27110 PF07662 Na+ dependent nucleoside transporter C-terminus F3L01_27110 PF01773 Na+ dependent nucleoside transporter N-terminus F3L01_27125 PF02028 BCCT, betaine/carnitine/choline family transporter F3L01_27135 PF01476 LysM domain F3L01_27135 PF06725 3D domain F3L01_27160 PF04434 SWIM zinc finger F3L01_27165 PF12419 SNF2 Helicase protein F3L01_27165 PF00271 Helicase conserved C-terminal domain F3L01_27165 PF00176 SNF2 family N-terminal domain F3L01_27195 PF04545 Sigma-70, region 4 F3L01_27195 PF04542 Sigma-70 region 2 F3L01_27205 PF04893 Yip1 domain F3L01_27210 PF02687 FtsX-like permease family F3L01_27210 PF12704 MacB-like periplasmic core domain F3L01_27215 PF00005 ABC transporter F3L01_27225 PF07690 Major Facilitator Superfamily F3L01_27240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3L01_27240 PF00512 His Kinase A (phospho-acceptor) domain F3L01_27240 PF16736 Single Cache-like F3L01_27240 PF00989 PAS fold F3L01_27245 PF00072 Response regulator receiver domain F3L01_27245 PF00486 Transcriptional regulatory protein, C terminal F3L01_27250 PF01238 Phosphomannose isomerase type I F3L01_27255 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 F3L01_27255 PF02378 Phosphotransferase system, EIIC F3L01_27255 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit F3L01_27260 PF00874 PRD domain F3L01_27260 PF05043 Mga helix-turn-helix domain F3L01_27260 PF08279 HTH domain F3L01_27260 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 F3L01_27265 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I F3L01_27265 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain F3L01_27265 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III F3L01_27265 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II F3L01_27275 PF03816 Cell envelope-related transcriptional attenuator domain F3L01_27280 PF01238 Phosphomannose isomerase type I F3L01_27285 PF00483 Nucleotidyl transferase F3L01_27285 PF01050 Mannose-6-phosphate isomerase F3L01_27290 PF00534 Glycosyl transferases group 1 F3L01_27290 PF13439 Glycosyltransferase Family 4 F3L01_27295 PF00534 Glycosyl transferases group 1 F3L01_27295 PF13439 Glycosyltransferase Family 4 F3L01_27300 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain F3L01_27300 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain F3L01_27300 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain F3L01_27305 PF13439 Glycosyltransferase Family 4 F3L01_27305 PF00534 Glycosyl transferases group 1 F3L01_27315 PF01370 NAD dependent epimerase/dehydratase family F3L01_27330 PF02397 Bacterial sugar transferase F3L01_27335 PF00483 Nucleotidyl transferase F3L01_27345 PF13614 AAA domain F3L01_27350 PF02706 Chain length determinant protein F3L01_27350 PF13807 G-rich domain on putative tyrosine kinase F3L01_27355 PF13614 AAA domain F3L01_27360 PF07977 FabA-like domain F3L01_27370 PF12116 Stage III sporulation protein D F3L01_27380 PF01551 Peptidase family M23 F3L01_27390 PF00005 ABC transporter F3L01_27395 PF00072 Response regulator receiver domain F3L01_27395 PF04397 LytTr DNA-binding domain F3L01_27410 PF08486 Stage II sporulation protein F3L01_27415 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) F3L01_27425 PF06612 Protein of unknown function (DUF1146) F3L01_27430 PF00361 Proton-conducting membrane transporter F3L01_27435 PF00361 Proton-conducting membrane transporter F3L01_27440 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus F3L01_27440 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus F3L01_27440 PF00361 Proton-conducting membrane transporter F3L01_27445 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L F3L01_27450 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 F3L01_27460 PF00146 NADH dehydrogenase F3L01_27465 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit F3L01_27470 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit F3L01_27475 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit F3L01_27480 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 F3L01_27485 PF03707 Bacterial signalling protein N terminal repeat F3L01_27485 PF00563 EAL domain F3L01_27485 PF00990 Diguanylate cyclase, GGDEF domain F3L01_27500 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain F3L01_27500 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain F3L01_27505 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain F3L01_27505 PF02874 ATP synthase alpha/beta family, beta-barrel domain F3L01_27510 PF00231 ATP synthase F3L01_27515 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain F3L01_27515 PF02874 ATP synthase alpha/beta family, beta-barrel domain F3L01_27515 PF00306 ATP synthase alpha/beta chain, C terminal domain F3L01_27520 PF00213 ATP synthase delta (OSCP) subunit F3L01_27525 PF00430 ATP synthase B/B' CF(0) F3L01_27530 PF00137 ATP synthase subunit C F3L01_27535 PF00119 ATP synthase A chain F3L01_27540 PF03899 ATP synthase I chain F3L01_27560 PF00464 Serine hydroxymethyltransferase F3L01_27565 PF04260 Protein of unknown function (DUF436) F3L01_27570 PF02502 Ribose/Galactose Isomerase F3L01_27575 PF01451 Low molecular weight phosphotyrosine protein phosphatase F3L01_27580 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 F3L01_27585 PF07681 DoxX F3L01_27590 PF01613 Flavin reductase like domain F3L01_27600 PF02659 Putative manganese efflux pump F3L01_27605 PF03481 Putative GTP-binding controlling metal-binding F3L01_27605 PF01300 Telomere recombination F3L01_27615 PF09551 Stage II sporulation protein R (spore_II_R) F3L01_27620 PF13847 Methyltransferase domain F3L01_27620 PF17827 PrmC N-terminal domain F3L01_27625 PF00472 RF-1 domain F3L01_27625 PF03462 PCRF domain F3L01_27630 PF00265 Thymidine kinase F3L01_27635 PF01197 Ribosomal protein L31 F3L01_27645 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain F3L01_27645 PF07498 Rho termination factor, N-terminal domain F3L01_27645 PF07497 Rho termination factor, RNA-binding domain F3L01_27655 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded F3L01_27660 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) F3L01_27665 PF01116 Fructose-bisphosphate aldolase class-II F3L01_27670 PF00072 Response regulator receiver domain F3L01_27675 PF10740 Domain of unknown function (DUF2529) F3L01_27680 PF00117 Glutamine amidotransferase class-I F3L01_27680 PF06418 CTP synthase N-terminus F3L01_27685 PF05066 HB1, ASXL, restriction endonuclease HTH domain F3L01_27695 PF02770 Acyl-CoA dehydrogenase, middle domain F3L01_27695 PF02771 Acyl-CoA dehydrogenase, N-terminal domain F3L01_27695 PF00441 Acyl-CoA dehydrogenase, C-terminal domain F3L01_27700 PF02771 Acyl-CoA dehydrogenase, N-terminal domain F3L01_27700 PF02770 Acyl-CoA dehydrogenase, middle domain F3L01_27700 PF00441 Acyl-CoA dehydrogenase, C-terminal domain F3L01_27705 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain F3L01_27705 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain F3L01_27710 PF02803 Thiolase, C-terminal domain F3L01_27710 PF00108 Thiolase, N-terminal domain F3L01_27715 PF13183 4Fe-4S dicluster domain F3L01_27715 PF02754 Cysteine-rich domain F3L01_27720 PF13091 PLD-like domain F3L01_27725 PF03851 UV-endonuclease UvdE F3L01_27730 PF00563 EAL domain F3L01_27730 PF00990 Diguanylate cyclase, GGDEF domain F3L01_27730 PF03707 Bacterial signalling protein N terminal repeat F3L01_27745 PF02868 Thermolysin metallopeptidase, alpha-helical domain F3L01_27745 PF01447 Thermolysin metallopeptidase, catalytic domain F3L01_27745 PF03413 Peptidase propeptide and YPEB domain F3L01_27745 PF07504 Fungalysin/Thermolysin Propeptide Motif F3L01_27750 PF00072 Response regulator receiver domain F3L01_27750 PF00196 Bacterial regulatory proteins, luxR family F3L01_27755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3L01_27755 PF07730 Histidine kinase F3L01_27765 PF00005 ABC transporter F3L01_27770 PF00557 Metallopeptidase family M24 F3L01_27780 PF04389 Peptidase family M28 F3L01_27780 PF02225 PA domain F3L01_27800 PF08281 Sigma-70, region 4 F3L01_27800 PF04542 Sigma-70 region 2 F3L01_27805 PF03485 Arginyl tRNA synthetase N terminal domain F3L01_27805 PF00750 tRNA synthetases class I (R) F3L01_27805 PF05746 DALR anticodon binding domain F3L01_27810 PF09148 Domain of unknown function (DUF1934) F3L01_27815 PF17676 LD-carboxypeptidase C-terminal domain F3L01_27815 PF02016 LD-carboxypeptidase N-terminal domain F3L01_27830 PF00491 Arginase family F3L01_27835 PF17284 Spermidine synthase tetramerisation domain F3L01_27840 PF07690 Major Facilitator Superfamily F3L01_27845 PF13411 MerR HTH family regulatory protein F3L01_27850 PF03009 Glycerophosphoryl diester phosphodiesterase family F3L01_27855 PF00905 Penicillin binding protein transpeptidase domain F3L01_27855 PF00912 Transglycosylase F3L01_27860 PF08741 YwhD family F3L01_27865 PF02163 Peptidase family M50 F3L01_27870 PF01361 Tautomerase enzyme F3L01_27875 PF01966 HD domain F3L01_27880 PF01497 Periplasmic binding protein F3L01_27885 PF00005 ABC transporter F3L01_27890 PF01032 FecCD transport family F3L01_27895 PF01032 FecCD transport family F3L01_27900 PF07293 Protein of unknown function (DUF1450) F3L01_27915 PF01515 Phosphate acetyl/butaryl transferase F3L01_27925 PF07943 Penicillin-binding protein 5, C-terminal domain F3L01_27925 PF00768 D-alanyl-D-alanine carboxypeptidase F3L01_27930 PF07486 Cell Wall Hydrolase F3L01_27935 PF09671 Spore coat protein (Spore_GerQ) F3L01_27940 PF04241 Protein of unknown function (DUF423) F3L01_27950 PF02254 TrkA-N domain F3L01_27950 PF07885 Ion channel F3L01_27955 PF00860 Permease family F3L01_27965 PF12823 Domain of unknown function (DUF3817) F3L01_27970 PF03167 Uracil DNA glycosylase superfamily F3L01_27975 PF12679 ABC-2 family transporter protein F3L01_27980 PF00005 ABC transporter F3L01_27985 PF13472 GDSL-like Lipase/Acylhydrolase family F3L01_27990 PF00356 Bacterial regulatory proteins, lacI family F3L01_27990 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family F3L01_28000 PF01842 ACT domain F3L01_28000 PF00742 Homoserine dehydrogenase F3L01_28000 PF03447 Homoserine dehydrogenase, NAD binding domain F3L01_28005 PF04204 Homoserine O-succinyltransferase F3L01_28010 PF01053 Cys/Met metabolism PLP-dependent enzyme F3L01_28020 PF13419 Haloacid dehalogenase-like hydrolase F3L01_28025 PF00027 Cyclic nucleotide-binding domain F3L01_28030 PF02525 Flavodoxin-like fold F3L01_28035 PF00196 Bacterial regulatory proteins, luxR family F3L01_28035 PF00072 Response regulator receiver domain F3L01_28040 PF13185 GAF domain F3L01_28040 PF07730 Histidine kinase F3L01_28045 PF08543 Phosphomethylpyrimidine kinase F3L01_28050 PF07694 5TMR of 5TMR-LYT F3L01_28050 PF00990 Diguanylate cyclase, GGDEF domain F3L01_28055 PF04328 Selenoprotein, putative F3L01_28060 PF02554 Carbon starvation protein CstA F3L01_28060 PF13722 5TM C-terminal transporter carbon starvation CstA F3L01_28065 PF00072 Response regulator receiver domain F3L01_28065 PF04397 LytTr DNA-binding domain F3L01_28070 PF07690 Major Facilitator Superfamily F3L01_28080 PF03808 Glycosyl transferase WecB/TagA/CpsF family F3L01_28085 PF13439 Glycosyltransferase Family 4 F3L01_28085 PF00534 Glycosyl transferases group 1 F3L01_28095 PF03458 UPF0126 domain F3L01_28100 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F3L01_28110 PF03061 Thioesterase superfamily F3L01_28115 PF00535 Glycosyl transferase family 2 F3L01_28130 PF00535 Glycosyl transferase family 2 F3L01_28145 PF00535 Glycosyl transferase family 2 F3L01_28150 PF12848 ABC transporter F3L01_28150 PF00005 ABC transporter F3L01_28155 PF00440 Bacterial regulatory proteins, tetR family F3L01_28160 PF00873 AcrB/AcrD/AcrF family F3L01_28165 PF01641 SelR domain F3L01_28165 PF01625 Peptide methionine sulfoxide reductase F3L01_28170 PF01594 AI-2E family transporter F3L01_28175 PF04172 LrgB-like family F3L01_28180 PF03788 LrgA family F3L01_28185 PF04397 LytTr DNA-binding domain F3L01_28185 PF00072 Response regulator receiver domain F3L01_28190 PF06580 Histidine kinase F3L01_28190 PF07694 5TMR of 5TMR-LYT F3L01_28190 PF13492 GAF domain F3L01_28190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3L01_28195 PF07690 Major Facilitator Superfamily F3L01_28200 PF02028 BCCT, betaine/carnitine/choline family transporter F3L01_28205 PF02898 Nitric oxide synthase, oxygenase domain F3L01_28215 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain F3L01_28215 PF02777 Iron/manganese superoxide dismutases, C-terminal domain F3L01_28225 PF02293 AmiS/UreI family transporter F3L01_28235 PF16363 GDP-mannose 4,6 dehydratase F3L01_28240 PF03006 Haemolysin-III related F3L01_28250 PF03880 DbpA RNA binding domain F3L01_28250 PF00270 DEAD/DEAH box helicase F3L01_28250 PF00271 Helicase conserved C-terminal domain F3L01_28255 PF00478 IMP dehydrogenase / GMP reductase domain F3L01_28260 PF08439 Oligopeptidase F F3L01_28260 PF01432 Peptidase family M3 F3L01_28285 PF03412 Peptidase C39 family F3L01_28285 PF00664 ABC transporter transmembrane region F3L01_28285 PF00005 ABC transporter F3L01_28305 PF00005 ABC transporter F3L01_28320 PF02590 Predicted SPOUT methyltransferase F3L01_28330 PF13180 PDZ domain F3L01_28335 PF00753 Metallo-beta-lactamase superfamily F3L01_28340 PF09648 YycH protein F3L01_28350 PF00672 HAMP domain F3L01_28350 PF00512 His Kinase A (phospho-acceptor) domain F3L01_28350 PF13426 PAS domain F3L01_28350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3L01_28355 PF00486 Transcriptional regulatory protein, C terminal F3L01_28355 PF00072 Response regulator receiver domain F3L01_28380 PF00709 Adenylosuccinate synthetase F3L01_28385 PF03796 DnaB-like helicase C terminal domain F3L01_28385 PF00772 DnaB-like helicase N terminal domain F3L01_28390 PF03948 Ribosomal protein L9, C-terminal domain F3L01_28390 PF01281 Ribosomal protein L9, N-terminal domain F3L01_28395 PF01368 DHH family F3L01_28395 PF02272 DHHA1 domain F3L01_28400 PF09991 Predicted membrane protein (DUF2232) F3L01_28405 PF01084 Ribosomal protein S18 F3L01_28410 PF00436 Single-strand binding protein family F3L01_28415 PF01250 Ribosomal protein S6 F3L01_28420 PF01926 50S ribosome-binding GTPase F3L01_28420 PF06071 Protein of unknown function (DUF933) F3L01_28425 PF06107 Bacterial protein of unknown function (DUF951) F3L01_28430 PF00924 Mechanosensitive ion channel F3L01_28435 PF06866 Protein of unknown function (DUF1256) F3L01_28440 PF17762 HTH domain found in ParB protein F3L01_28440 PF02195 ParB-like nuclease domain F3L01_28445 PF13614 AAA domain F3L01_28450 PF17762 HTH domain found in ParB protein F3L01_28450 PF02195 ParB-like nuclease domain F3L01_28455 PF02527 rRNA small subunit methyltransferase G F3L01_28460 PF01134 Glucose inhibited division protein A F3L01_28460 PF13932 GidA associated domain F3L01_28465 PF12631 MnmE helical domain F3L01_28465 PF01926 50S ribosome-binding GTPase F3L01_28465 PF10396 GTP-binding protein TrmE N-terminus F3L01_28470 PF14804 Jag N-terminus F3L01_28470 PF01424 R3H domain F3L01_28475 PF02096 60Kd inner membrane protein F3L01_28480 PF00825 Ribonuclease P F3L01_28485 PF00468 Ribosomal protein L34 F3L01_28535 PF00437 Type II/IV secretion system protein F3L01_28585 PF01381 Helix-turn-helix F3L01_28590 PF00072 Response regulator receiver domain F3L01_28590 PF00196 Bacterial regulatory proteins, luxR family F3L01_28595 PF00512 His Kinase A (phospho-acceptor) domain F3L01_28595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3L01_28650 PF01580 FtsK/SpoIIIE family F3L01_28650 PF09397 Ftsk gamma domain F3L01_28650 PF17854 FtsK alpha domain F3L01_28685 PF00226 DnaJ domain F3L01_28685 PF01556 DnaJ C terminal domain F3L01_28685 PF00684 DnaJ central domain F3L01_28695 PF04262 Glutamate-cysteine ligase F3L01_28695 PF18419 ATP-grasp-like domain F3L01_28695 PF02655 ATP-grasp domain F3L01_28705 PF00756 Putative esterase F3L01_28710 PF08240 Alcohol dehydrogenase GroES-like domain F3L01_28710 PF00107 Zinc-binding dehydrogenase F3L01_28715 PF01638 HxlR-like helix-turn-helix F3L01_28735 PF03323 Bacillus/Clostridium GerA spore germination protein F3L01_28740 PF03845 Spore germination protein F3L01_28750 PF00239 Resolvase, N terminal domain F3L01_28750 PF02796 Helix-turn-helix domain of resolvase F3L01_28755 PF00574 Clp protease F3L01_28760 PF04239 Protein of unknown function (DUF421) F3L01_28770 PF03862 SpoVAC/SpoVAEB sporulation membrane protein F3L01_28775 PF07451 Stage V sporulation protein AD (SpoVAD) F3L01_28780 PF03862 SpoVAC/SpoVAEB sporulation membrane protein F3L01_28795 PF02899 Phage integrase, N-terminal SAM-like domain F3L01_28795 PF00589 Phage integrase family F3L01_28800 PF02796 Helix-turn-helix domain of resolvase F3L01_28800 PF00239 Resolvase, N terminal domain F3L01_28810 PF13700 Domain of unknown function (DUF4158) F3L01_28810 PF01526 Tn3 transposase DDE domain F3L01_28830 PF01609 Transposase DDE domain F3L01_28855 PF01695 IstB-like ATP binding protein F3L01_28860 PF00665 Integrase core domain F3L01_28860 PF02796 Helix-turn-helix domain of resolvase F3L01_28865 PF01230 HIT domain F3L01_28875 PF05036 Sporulation related domain F3L01_28875 PF01520 N-acetylmuramoyl-L-alanine amidase F3L01_28885 PF00239 Resolvase, N terminal domain F3L01_28885 PF02796 Helix-turn-helix domain of resolvase F3L01_28890 PF12833 Helix-turn-helix domain F3L01_28890 PF06445 GyrI-like small molecule binding domain F3L01_28895 PF00239 Resolvase, N terminal domain F3L01_28895 PF02796 Helix-turn-helix domain of resolvase F3L01_28905 PF02796 Helix-turn-helix domain of resolvase F3L01_28905 PF00239 Resolvase, N terminal domain F3L01_28910 PF00665 Integrase core domain F3L01_28910 PF09299 Mu transposase, C-terminal F3L01_28915 PF13401 AAA domain F3L01_28935 PF00817 impB/mucB/samB family F3L01_28935 PF11799 impB/mucB/samB family C-terminal domain F3L01_28935 PF11798 IMS family HHH motif F3L01_28940 PF14040 Deoxyribonuclease NucA/NucB F3L01_28945 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) F3L01_28945 PF01348 Type II intron maturase F3L01_28965 PF04002 RadC-like JAB domain F3L01_29180 PF01580 FtsK/SpoIIIE family F3L01_29180 PF17854 FtsK alpha domain F3L01_29180 PF09397 Ftsk gamma domain F3L01_29205 PF17209 Hfq protein F3L01_29250 PF14040 Deoxyribonuclease NucA/NucB F3L01_29255 PF01348 Type II intron maturase F3L01_29255 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) F3L01_29290 PF00589 Phage integrase family F3L01_29320 PF05504 Spore germination B3/ GerAC like, C-terminal