locus-tag class description CJ306_00005 PF11638 DnaA N-terminal domain CJ306_00005 PF00308 Bacterial dnaA protein CJ306_00005 PF08299 Bacterial dnaA protein helix-turn-helix CJ306_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain CJ306_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain CJ306_00010 PF02767 DNA polymerase III beta subunit, central domain CJ306_00020 PF02463 RecF/RecN/SMC N terminal domain CJ306_00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJ306_00025 PF01751 Toprim domain CJ306_00025 PF00986 DNA gyrase B subunit, carboxyl terminus CJ306_00025 PF00204 DNA gyrase B CJ306_00030 PF00521 DNA gyrase/topoisomerase IV, subunit A CJ306_00030 PF03989 DNA gyrase C-terminal domain, beta-propeller CJ306_00060 PF14175 YaaC-like Protein CJ306_00065 PF00478 IMP dehydrogenase / GMP reductase domain CJ306_00065 PF00571 CBS domain CJ306_00070 PF00768 D-alanyl-D-alanine carboxypeptidase CJ306_00070 PF07943 Penicillin-binding protein 5, C-terminal domain CJ306_00075 PF01680 SOR/SNZ family CJ306_00080 PF01174 SNO glutamine amidotransferase family CJ306_00085 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CJ306_00085 PF02403 Seryl-tRNA synthetase N-terminal domain CJ306_00100 PF01712 Deoxynucleoside kinase CJ306_00105 PF01712 Deoxynucleoside kinase CJ306_00110 PF00857 Isochorismatase family CJ306_00120 PF14437 MafB19-like deaminase CJ306_00130 PF12169 DNA polymerase III subunits gamma and tau domain III CJ306_00135 PF02575 YbaB/EbfC DNA-binding family CJ306_00140 PF02132 RecR protein CJ306_00140 PF13662 Toprim domain CJ306_00145 PF10704 Protein of unknown function (DUF2508) CJ306_00150 PF07441 SigmaK-factor processing regulatory protein BofA CJ306_00185 PF01276 Orn/Lys/Arg decarboxylase, major domain CJ306_00185 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CJ306_00190 PF02223 Thymidylate kinase CJ306_00195 PF09115 DNA polymerase III, delta subunit, C terminal CJ306_00200 PF04468 PSP1 C-terminal conserved region CJ306_00205 PF06156 Initiation control protein YabA CJ306_00210 PF05175 Methyltransferase small domain CJ306_00215 PF01541 GIY-YIG catalytic domain CJ306_00220 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CJ306_00225 PF18277 AbrB C-terminal domain CJ306_00225 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin CJ306_00230 PF09334 tRNA synthetases class I (M) CJ306_00230 PF08264 Anticodon-binding domain of tRNA CJ306_00230 PF01588 Putative tRNA binding domain CJ306_00235 PF01026 TatD related DNase CJ306_00240 PF13662 Toprim domain CJ306_00240 PF13331 Domain of unknown function (DUF4093) CJ306_00245 PF00398 Ribosomal RNA adenine dimethylase CJ306_00250 PF05582 YabG peptidase U57 CJ306_00255 PF06257 Biofilm formation stimulator VEG CJ306_00260 PF00269 Small, acid-soluble spore proteins, alpha/beta type CJ306_00265 PF08544 GHMP kinases C terminal CJ306_00265 PF00288 GHMP kinases N terminal domain CJ306_00270 PF09182 Bacterial purine repressor, N-terminal CJ306_00270 PF00156 Phosphoribosyl transferase domain CJ306_00275 PF01042 Endoribonuclease L-PSP CJ306_00280 PF04026 SpoVG CJ306_00285 PF00132 Bacterial transferase hexapeptide (six repeats) CJ306_00285 PF00483 Nucleotidyl transferase CJ306_00290 PF14572 Phosphoribosyl synthetase-associated domain CJ306_00290 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CJ306_00295 PF01195 Peptidyl-tRNA hydrolase CJ306_00305 PF02559 CarD-like/TRCF domain CJ306_00305 PF17757 UvrB interaction domain CJ306_00305 PF03461 TRCF domain CJ306_00305 PF00271 Helicase conserved C-terminal domain CJ306_00305 PF00270 DEAD/DEAH box helicase CJ306_00310 PF15714 Stage V sporulation protein T C-terminal, transcription factor CJ306_00310 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin CJ306_00315 PF14667 Polysaccharide biosynthesis C-terminal domain CJ306_00315 PF01943 Polysaccharide biosynthesis protein CJ306_00320 PF03819 MazG nucleotide pyrophosphohydrolase domain CJ306_00320 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CJ306_00325 PF01479 S4 domain CJ306_00330 PF07873 YabP family CJ306_00335 PF09578 Spore cortex protein YabQ (Spore_YabQ) CJ306_00345 PF00575 S1 RNA binding domain CJ306_00360 PF07228 Stage II sporulation protein E (SpoIIE) CJ306_00365 PF01171 PP-loop family CJ306_00365 PF09179 TilS substrate binding domain CJ306_00365 PF11734 TilS substrate C-terminal domain CJ306_00375 PF00004 ATPase family associated with various cellular activities (AAA) CJ306_00375 PF01434 Peptidase family M41 CJ306_00375 PF06480 FtsH Extracellular CJ306_00375 PF17862 AAA+ lid domain CJ306_00380 PF03309 Type III pantothenate kinase CJ306_00385 PF01430 Hsp33 protein CJ306_00390 PF00291 Pyridoxal-phosphate dependent enzyme CJ306_00395 PF04715 Anthranilate synthase component I, N terminal region CJ306_00395 PF00425 chorismate binding enzyme CJ306_00400 PF00117 Glutamine amidotransferase class-I CJ306_00405 PF01063 Amino-transferase class IV CJ306_00410 PF00809 Pterin binding enzyme CJ306_00415 PF02152 Dihydroneopterin aldolase CJ306_00420 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CJ306_00425 PF01381 Helix-turn-helix CJ306_00430 PF01207 Dihydrouridine synthase (Dus) CJ306_00435 PF00152 tRNA synthetases class II (D, K and N) CJ306_00435 PF01336 OB-fold nucleic acid binding domain CJ306_00515 PF05848 CtsR N-terminal HTH domain CJ306_00515 PF17727 CtsR C-terminal dimerization domain CJ306_00520 PF02151 UvrB/uvrC motif CJ306_00525 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain CJ306_00530 PF02861 Clp amino terminal domain, pathogenicity island component CJ306_00530 PF07724 AAA domain (Cdc48 subfamily) CJ306_00530 PF00004 ATPase family associated with various cellular activities (AAA) CJ306_00530 PF10431 C-terminal, D2-small domain, of ClpB protein CJ306_00530 PF17871 AAA lid domain CJ306_00535 PF18073 Rubredoxin metal binding domain CJ306_00540 PF10635 DisA bacterial checkpoint controller linker region CJ306_00540 PF02457 DisA bacterial checkpoint controller nucleotide-binding CJ306_00550 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CJ306_00555 PF02542 YgbB family CJ306_00560 PF00749 tRNA synthetases class I (E and Q), catalytic domain CJ306_00565 PF00132 Bacterial transferase hexapeptide (six repeats) CJ306_00565 PF06426 Serine acetyltransferase, N-terminal CJ306_00570 PF01406 tRNA synthetases class I (C) catalytic domain CJ306_00570 PF09190 DALR domain CJ306_00575 PF00636 Ribonuclease III domain CJ306_00580 PF08032 RNA 2'-O ribose methyltransferase substrate binding CJ306_00580 PF00588 SpoU rRNA Methylase family CJ306_00585 PF05991 YacP-like NYN domain CJ306_00590 PF08281 Sigma-70, region 4 CJ306_00590 PF04542 Sigma-70 region 2 CJ306_00595 PF00471 Ribosomal protein L33 CJ306_00600 PF00584 SecE/Sec61-gamma subunits of protein translocation complex CJ306_00605 PF00467 KOW motif CJ306_00605 PF02357 Transcription termination factor nusG CJ306_00610 PF00298 Ribosomal protein L11, RNA binding domain CJ306_00610 PF03946 Ribosomal protein L11, N-terminal domain CJ306_00615 PF00687 Ribosomal protein L1p/L10e family CJ306_00620 PF00466 Ribosomal protein L10 CJ306_00625 PF00542 Ribosomal protein L7/L12 C-terminal domain CJ306_00625 PF16320 Ribosomal protein L7/L12 dimerisation domain CJ306_00630 PF05175 Methyltransferase small domain CJ306_00635 PF04560 RNA polymerase Rpb2, domain 7 CJ306_00635 PF00562 RNA polymerase Rpb2, domain 6 CJ306_00635 PF10385 RNA polymerase beta subunit external 1 domain CJ306_00635 PF04561 RNA polymerase Rpb2, domain 2 CJ306_00635 PF04565 RNA polymerase Rpb2, domain 3 CJ306_00635 PF04563 RNA polymerase beta subunit CJ306_00640 PF04998 RNA polymerase Rpb1, domain 5 CJ306_00640 PF00623 RNA polymerase Rpb1, domain 2 CJ306_00640 PF05000 RNA polymerase Rpb1, domain 4 CJ306_00640 PF04997 RNA polymerase Rpb1, domain 1 CJ306_00640 PF04983 RNA polymerase Rpb1, domain 3 CJ306_00645 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family CJ306_00650 PF00164 Ribosomal protein S12/S23 CJ306_00655 PF00177 Ribosomal protein S7p/S5e CJ306_00660 PF03144 Elongation factor Tu domain 2 CJ306_00660 PF03764 Elongation factor G, domain IV CJ306_00660 PF14492 Elongation Factor G, domain II CJ306_00660 PF00679 Elongation factor G C-terminus CJ306_00660 PF00009 Elongation factor Tu GTP binding domain CJ306_00665 PF00009 Elongation factor Tu GTP binding domain CJ306_00665 PF03143 Elongation factor Tu C-terminal domain CJ306_00665 PF03144 Elongation factor Tu domain 2 CJ306_00675 PF00338 Ribosomal protein S10p/S20e CJ306_00680 PF00297 Ribosomal protein L3 CJ306_00685 PF00573 Ribosomal protein L4/L1 family CJ306_00690 PF00276 Ribosomal protein L23 CJ306_00695 PF00181 Ribosomal Proteins L2, RNA binding domain CJ306_00695 PF03947 Ribosomal Proteins L2, C-terminal domain CJ306_00700 PF00203 Ribosomal protein S19 CJ306_00705 PF00237 Ribosomal protein L22p/L17e CJ306_00710 PF00189 Ribosomal protein S3, C-terminal domain CJ306_00710 PF07650 KH domain CJ306_00715 PF00252 Ribosomal protein L16p/L10e CJ306_00720 PF00831 Ribosomal L29 protein CJ306_00725 PF00366 Ribosomal protein S17 CJ306_00730 PF00238 Ribosomal protein L14p/L23e CJ306_00735 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 CJ306_00735 PF00467 KOW motif CJ306_00740 PF00281 Ribosomal protein L5 CJ306_00740 PF00673 ribosomal L5P family C-terminus CJ306_00745 PF00253 Ribosomal protein S14p/S29e CJ306_00750 PF00410 Ribosomal protein S8 CJ306_00755 PF00347 Ribosomal protein L6 CJ306_00760 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CJ306_00765 PF03719 Ribosomal protein S5, C-terminal domain CJ306_00765 PF00333 Ribosomal protein S5, N-terminal domain CJ306_00770 PF00327 Ribosomal protein L30p/L7e CJ306_00775 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CJ306_00780 PF00344 SecY translocase CJ306_00785 PF05191 Adenylate kinase, active site lid CJ306_00790 PF00557 Metallopeptidase family M24 CJ306_00795 PF01176 Translation initiation factor 1A / IF-1 CJ306_00800 PF00444 Ribosomal protein L36 CJ306_00805 PF00416 Ribosomal protein S13/S18 CJ306_00810 PF00411 Ribosomal protein S11 CJ306_00815 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CJ306_00815 PF01000 RNA polymerase Rpb3/RpoA insert domain CJ306_00815 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CJ306_00820 PF01196 Ribosomal protein L17 CJ306_00825 PF00005 ABC transporter CJ306_00830 PF00005 ABC transporter CJ306_00835 PF02361 Cobalt transport protein CJ306_00840 PF01416 tRNA pseudouridine synthase CJ306_00845 PF00572 Ribosomal protein L13 CJ306_00850 PF00380 Ribosomal protein S9/S16 CJ306_00860 PF01520 N-acetylmuramoyl-L-alanine amidase CJ306_00865 PF10609 NUBPL iron-transfer P-loop NTPase CJ306_00870 PF17898 Spore germination GerD central core domain CJ306_00875 PF14089 KinB-signalling pathway activation in sporulation CJ306_00880 PF01522 Polysaccharide deacetylase CJ306_00950 PF02595 Glycerate kinase family CJ306_00955 PF00491 Arginase family CJ306_00960 PF02457 DisA bacterial checkpoint controller nucleotide-binding CJ306_00965 PF07949 YbbR-like protein CJ306_00970 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CJ306_00970 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CJ306_00970 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CJ306_00970 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CJ306_00980 PF01380 SIS domain CJ306_00990 PF00326 Prolyl oligopeptidase family CJ306_00990 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region CJ306_01010 PF00528 Binding-protein-dependent transport system inner membrane component CJ306_01015 PF00005 ABC transporter CJ306_01015 PF09383 NIL domain CJ306_01020 PF03180 NLPA lipoprotein CJ306_01025 PF08240 Alcohol dehydrogenase GroES-like domain CJ306_01025 PF00107 Zinc-binding dehydrogenase CJ306_01035 PF01565 FAD binding domain CJ306_01040 PF07690 Major Facilitator Superfamily CJ306_01050 PF07690 Major Facilitator Superfamily CJ306_01065 PF00528 Binding-protein-dependent transport system inner membrane component CJ306_01070 PF12911 N-terminal TM domain of oligopeptide transport permease C CJ306_01070 PF00528 Binding-protein-dependent transport system inner membrane component CJ306_01075 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CJ306_01075 PF00005 ABC transporter CJ306_01080 PF00005 ABC transporter CJ306_01080 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CJ306_01085 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CJ306_01095 PF12833 Helix-turn-helix domain CJ306_01110 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CJ306_01115 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CJ306_01125 PF03807 NADP oxidoreductase coenzyme F420-dependent CJ306_01125 PF14748 Pyrroline-5-carboxylate reductase dimerisation CJ306_01130 PF06800 Sugar transport protein CJ306_01135 PF00528 Binding-protein-dependent transport system inner membrane component CJ306_01145 PF12727 PBP superfamily domain CJ306_01145 PF12728 Helix-turn-helix domain CJ306_01160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJ306_01160 PF03466 LysR substrate binding domain CJ306_01165 PF00892 EamA-like transporter family CJ306_01170 PF14142 YrzO-like protein CJ306_01180 PF01553 Acyltransferase CJ306_01195 PF00356 Bacterial regulatory proteins, lacI family CJ306_01195 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CJ306_01205 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CJ306_01205 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CJ306_01225 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) CJ306_01250 PF00005 ABC transporter CJ306_01250 PF12848 ABC transporter CJ306_01250 PF16326 ABC transporter C-terminal domain CJ306_01265 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CJ306_01270 PF00528 Binding-protein-dependent transport system inner membrane component CJ306_01280 PF00005 ABC transporter CJ306_01280 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CJ306_01285 PF00005 ABC transporter CJ306_01285 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CJ306_01325 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CJ306_01330 PF01557 Fumarylacetoacetate (FAA) hydrolase family CJ306_01345 PF13520 Amino acid permease CJ306_01350 PF07690 Major Facilitator Superfamily CJ306_01355 PF07478 D-ala D-ala ligase C-terminus CJ306_01355 PF01820 D-ala D-ala ligase N-terminus CJ306_01360 PF01225 Mur ligase family, catalytic domain CJ306_01360 PF08245 Mur ligase middle domain CJ306_01360 PF02875 Mur ligase family, glutamate ligase domain CJ306_01365 PF00271 Helicase conserved C-terminal domain CJ306_01365 PF00270 DEAD/DEAH box helicase CJ306_01370 PF03851 UV-endonuclease UvdE CJ306_01375 PF01694 Rhomboid family CJ306_01380 PF01648 4'-phosphopantetheinyl transferase superfamily CJ306_01390 PF01168 Alanine racemase, N-terminal domain CJ306_01390 PF00842 Alanine racemase, C-terminal domain CJ306_01395 PF01402 Ribbon-helix-helix protein, copG family CJ306_01400 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system CJ306_01405 PF16921 Tex protein YqgF-like domain CJ306_01405 PF09371 Tex-like protein N-terminal domain CJ306_01405 PF17674 HHH domain CJ306_01405 PF00575 S1 RNA binding domain CJ306_01415 PF17283 SprT-like zinc ribbon domain CJ306_01415 PF10263 SprT-like family CJ306_01505 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE CJ306_01510 PF00814 Glycoprotease family CJ306_01515 PF00583 Acetyltransferase (GNAT) family CJ306_01520 PF00814 Glycoprotease family CJ306_01525 PF00005 ABC transporter CJ306_01525 PF12848 ABC transporter CJ306_01525 PF16326 ABC transporter C-terminal domain CJ306_01530 PF06971 Putative DNA-binding protein N-terminus CJ306_01530 PF02629 CoA binding domain CJ306_01540 PF02517 CPBP intramembrane metalloprotease CJ306_01545 PF00166 Chaperonin 10 Kd subunit CJ306_01550 PF00118 TCP-1/cpn60 chaperonin family CJ306_01555 PF00117 Glutamine amidotransferase class-I CJ306_01555 PF02540 NAD synthase CJ306_01555 PF00958 GMP synthase C terminal domain CJ306_01560 PF00860 Permease family CJ306_01565 PF00486 Transcriptional regulatory protein, C terminal CJ306_01565 PF00072 Response regulator receiver domain CJ306_01570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJ306_01570 PF00512 His Kinase A (phospho-acceptor) domain CJ306_01570 PF16736 Single Cache-like CJ306_01570 PF00989 PAS fold CJ306_01600 PF01323 DSBA-like thioredoxin domain CJ306_01630 PF02673 Bacitracin resistance protein BacA CJ306_01640 PF00005 ABC transporter CJ306_01645 PF00512 His Kinase A (phospho-acceptor) domain CJ306_01645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJ306_01650 PF00486 Transcriptional regulatory protein, C terminal CJ306_01650 PF00072 Response regulator receiver domain CJ306_01670 PF14307 Glycosyltransferase WbsX CJ306_01670 PF05045 Rhamnan synthesis protein F CJ306_01680 PF08241 Methyltransferase domain CJ306_01690 PF01370 NAD dependent epimerase/dehydratase family CJ306_01700 PF00535 Glycosyl transferase family 2 CJ306_01720 PF00892 EamA-like transporter family CJ306_01750 PF00731 AIR carboxylase CJ306_01755 PF02222 ATP-grasp domain CJ306_01755 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain CJ306_01760 PF00206 Lyase CJ306_01760 PF10397 Adenylosuccinate lyase C-terminus CJ306_01765 PF01259 SAICAR synthetase CJ306_01770 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase CJ306_01780 PF02769 AIR synthase related protein, C-terminal domain CJ306_01780 PF00586 AIR synthase related protein, N-terminal domain CJ306_01780 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CJ306_01785 PF00156 Phosphoribosyl transferase domain CJ306_01790 PF02769 AIR synthase related protein, C-terminal domain CJ306_01790 PF00586 AIR synthase related protein, N-terminal domain CJ306_01795 PF00551 Formyl transferase CJ306_01800 PF02142 MGS-like domain CJ306_01800 PF01808 AICARFT/IMPCHase bienzyme CJ306_01805 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CJ306_01805 PF02844 Phosphoribosylglycinamide synthetase, N domain CJ306_01805 PF02843 Phosphoribosylglycinamide synthetase, C domain CJ306_01830 PF01884 PcrB family CJ306_01835 PF00580 UvrD/REP helicase N-terminal domain CJ306_01835 PF13361 UvrD-like helicase C-terminal domain CJ306_01840 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CJ306_01840 PF01653 NAD-dependent DNA ligase adenylation domain CJ306_01840 PF00533 BRCA1 C Terminus (BRCT) domain CJ306_01840 PF03120 NAD-dependent DNA ligase OB-fold domain CJ306_01840 PF12826 Helix-hairpin-helix motif CJ306_01845 PF07537 CamS sex pheromone cAM373 precursor CJ306_01850 PF01925 Sulfite exporter TauE/SafE CJ306_01855 PF00171 Aldehyde dehydrogenase family CJ306_01860 PF00857 Isochorismatase family CJ306_01865 PF00005 ABC transporter CJ306_01865 PF09383 NIL domain CJ306_01870 PF00528 Binding-protein-dependent transport system inner membrane component CJ306_01875 PF03180 NLPA lipoprotein CJ306_01890 PF02374 Anion-transporting ATPase CJ306_01890 PF17886 HSP20-like domain found in ArsA CJ306_01895 PF01047 MarR family CJ306_01900 PF05360 yiaA/B two helix domain CJ306_01905 PF02686 Glu-tRNAGln amidotransferase C subunit CJ306_01910 PF01425 Amidase CJ306_01915 PF02934 GatB/GatE catalytic domain CJ306_01915 PF02637 GatB domain CJ306_01920 PF00781 Diacylglycerol kinase catalytic domain CJ306_01925 PF13419 Haloacid dehalogenase-like hydrolase CJ306_01930 PF00202 Aminotransferase class-III CJ306_01935 PF00158 Sigma-54 interaction domain CJ306_01940 PF00171 Aldehyde dehydrogenase family CJ306_01945 PF00893 Small Multidrug Resistance protein CJ306_01955 PF02073 Thermophilic metalloprotease (M29) CJ306_01970 PF07662 Na+ dependent nucleoside transporter C-terminus CJ306_01970 PF07670 Nucleoside recognition CJ306_01970 PF01773 Na+ dependent nucleoside transporter N-terminus CJ306_01975 PF13847 Methyltransferase domain CJ306_01975 PF01938 TRAM domain CJ306_01975 PF05958 tRNA (Uracil-5-)-methyltransferase CJ306_01980 PF01207 Dihydrouridine synthase (Dus) CJ306_01985 PF07308 Protein of unknown function (DUF1456) CJ306_02000 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CJ306_02000 PF13378 Enolase C-terminal domain-like CJ306_02015 PF07687 Peptidase dimerisation domain CJ306_02015 PF01546 Peptidase family M20/M25/M40 CJ306_02030 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJ306_02030 PF13192 Thioredoxin domain CJ306_02035 PF00578 AhpC/TSA family CJ306_02040 PF01636 Phosphotransferase enzyme family CJ306_02050 PF00596 Class II Aldolase and Adducin N-terminal domain CJ306_02055 PF01032 FecCD transport family CJ306_02060 PF01032 FecCD transport family CJ306_02065 PF01497 Periplasmic binding protein CJ306_02090 PF12728 Helix-turn-helix domain CJ306_02115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJ306_02115 PF00512 His Kinase A (phospho-acceptor) domain CJ306_02115 PF00989 PAS fold CJ306_02115 PF13188 PAS domain CJ306_02115 PF13426 PAS domain CJ306_02135 PF10127 RNA repair pathway DNA polymerase beta family CJ306_02140 PF07690 Major Facilitator Superfamily CJ306_02145 PF00355 Rieske [2Fe-2S] domain CJ306_02145 PF01266 FAD dependent oxidoreductase CJ306_02155 PF00528 Binding-protein-dependent transport system inner membrane component CJ306_02160 PF00497 Bacterial extracellular solute-binding proteins, family 3 CJ306_02165 PF00005 ABC transporter CJ306_02170 PF12729 Four helix bundle sensory module for signal transduction CJ306_02170 PF00672 HAMP domain CJ306_02170 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CJ306_02175 PF02863 Arginine repressor, C-terminal domain CJ306_02175 PF01316 Arginine repressor, DNA binding domain CJ306_02185 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CJ306_02185 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CJ306_02190 PF13520 Amino acid permease CJ306_02195 PF00696 Amino acid kinase family CJ306_02200 PF00027 Cyclic nucleotide-binding domain CJ306_02200 PF13545 Crp-like helix-turn-helix domain CJ306_02210 PF01565 FAD binding domain CJ306_02210 PF08031 Berberine and berberine like CJ306_02215 PF16657 Maltogenic Amylase, C-terminal domain CJ306_02215 PF00128 Alpha amylase, catalytic domain CJ306_02220 PF02378 Phosphotransferase system, EIIC CJ306_02220 PF00367 phosphotransferase system, EIIB CJ306_02220 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CJ306_02225 PF03372 Endonuclease/Exonuclease/phosphatase family CJ306_02230 PF01061 ABC-2 type transporter CJ306_02265 PF01381 Helix-turn-helix CJ306_02275 PF01131 DNA topoisomerase CJ306_02275 PF01751 Toprim domain CJ306_02290 PF00400 WD domain, G-beta repeat CJ306_02290 PF00805 Pentapeptide repeats (8 copies) CJ306_02290 PF05729 NACHT domain CJ306_02300 PF02110 Hydroxyethylthiazole kinase family CJ306_02305 PF02581 Thiamine monophosphate synthase CJ306_02310 PF03605 Anaerobic c4-dicarboxylate membrane transporter CJ306_02315 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CJ306_02315 PF00672 HAMP domain CJ306_02320 PF00975 Thioesterase domain CJ306_02320 PF00501 AMP-binding enzyme CJ306_02320 PF00668 Condensation domain CJ306_02320 PF13193 AMP-binding enzyme C-terminal domain CJ306_02320 PF00550 Phosphopantetheine attachment site CJ306_02325 PF01910 Thiamine-binding protein CJ306_02330 PF00528 Binding-protein-dependent transport system inner membrane component CJ306_02340 PF00005 ABC transporter CJ306_02350 PF00704 Glycosyl hydrolases family 18 CJ306_02350 PF00041 Fibronectin type III domain CJ306_02380 PF00440 Bacterial regulatory proteins, tetR family CJ306_02380 PF08360 QacR-like protein, C-terminal region CJ306_02395 PF11700 Vacuole effluxer Atg22 like CJ306_02410 PF03129 Anticodon binding domain CJ306_02410 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CJ306_02410 PF09180 Prolyl-tRNA synthetase, C-terminal CJ306_02420 PF00480 ROK family CJ306_02425 PF02342 TerD domain CJ306_02430 PF02342 TerD domain CJ306_02435 PF02342 TerD domain CJ306_02440 PF03741 Integral membrane protein TerC family CJ306_02445 PF14266 Putative component of 'biosynthetic module' CJ306_02450 PF05816 Toxic anion resistance protein (TelA) CJ306_02455 PF00690 Cation transporter/ATPase, N-terminus CJ306_02455 PF00689 Cation transporting ATPase, C-terminus CJ306_02460 PF06569 Protein of unknown function (DUF1128) CJ306_02465 PF01451 Low molecular weight phosphotyrosine protein phosphatase CJ306_02475 PF03631 Virulence factor BrkB CJ306_02490 PF00892 EamA-like transporter family CJ306_02500 PF10502 Signal peptidase, peptidase S26 CJ306_02510 PF09335 SNARE associated Golgi protein CJ306_02525 PF16242 Pyridoxamine 5'-phosphate oxidase like CJ306_02530 PF01699 Sodium/calcium exchanger protein CJ306_02535 PF14167 YfkD-like protein CJ306_02540 PF04055 Radical SAM superfamily CJ306_02540 PF08756 YfkB-like domain CJ306_02550 PF05681 Fumarate hydratase (Fumerase) CJ306_02550 PF05683 Fumarase C-terminus CJ306_02555 PF01522 Polysaccharide deacetylase CJ306_02560 PF00730 HhH-GPD superfamily base excision DNA repair protein CJ306_02565 PF05958 tRNA (Uracil-5-)-methyltransferase CJ306_02565 PF01938 TRAM domain CJ306_02570 PF01416 tRNA pseudouridine synthase CJ306_02580 PF00158 Sigma-54 interaction domain CJ306_02580 PF02954 Bacterial regulatory protein, Fis family CJ306_02580 PF13426 PAS domain CJ306_02590 PF00324 Amino acid permease CJ306_02595 PF07687 Peptidase dimerisation domain CJ306_02595 PF01546 Peptidase family M20/M25/M40 CJ306_02625 PF04960 Glutaminase CJ306_02630 PF02378 Phosphotransferase system, EIIC CJ306_02630 PF00367 phosphotransferase system, EIIB CJ306_02635 PF00144 Beta-lactamase CJ306_02650 PF00535 Glycosyl transferase family 2 CJ306_02655 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CJ306_02655 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CJ306_02655 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CJ306_02660 PF00551 Formyl transferase CJ306_02660 PF02911 Formyl transferase, C-terminal domain CJ306_02660 PF01370 NAD dependent epimerase/dehydratase family CJ306_02665 PF00535 Glycosyl transferase family 2 CJ306_02675 PF01228 Glycine radical CJ306_02675 PF02901 Pyruvate formate lyase-like CJ306_02680 PF04055 Radical SAM superfamily CJ306_02685 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase CJ306_02685 PF04101 Glycosyltransferase family 28 C-terminal domain CJ306_02700 PF01979 Amidohydrolase family CJ306_02705 PF01370 NAD dependent epimerase/dehydratase family CJ306_02705 PF08338 Domain of unknown function (DUF1731) CJ306_02710 PF02631 RecX family CJ306_02725 PF08176 Small acid-soluble spore protein K family CJ306_02730 PF14043 WVELL protein CJ306_02735 PF04307 LexA-binding, inner membrane-associated putative hydrolase CJ306_02740 PF14815 NUDIX domain CJ306_02740 PF00730 HhH-GPD superfamily base excision DNA repair protein CJ306_02750 PF04259 Small, acid-soluble spore protein, gamma-type CJ306_02755 PF14182 YgaB-like protein CJ306_02760 PF04167 Protein of unknown function (DUF402) CJ306_02765 PF00664 ABC transporter transmembrane region CJ306_02765 PF00005 ABC transporter CJ306_02770 PF06081 Aromatic acid exporter family member 1 CJ306_02775 PF01645 Conserved region in glutamate synthase CJ306_02775 PF01493 GXGXG motif CJ306_02775 PF00310 Glutamine amidotransferases class-II CJ306_02775 PF04898 Glutamate synthase central domain CJ306_02780 PF00202 Aminotransferase class-III CJ306_02785 PF00005 ABC transporter CJ306_02800 PF07885 Ion channel CJ306_02805 PF00578 AhpC/TSA family CJ306_02810 PF01475 Ferric uptake regulator family CJ306_02820 PF11023 Zinc-ribbon containing domain CJ306_02925 PF01709 Transcriptional regulator CJ306_02930 PF13344 Haloacid dehalogenase-like hydrolase CJ306_02930 PF00293 NUDIX domain CJ306_02935 PF00912 Transglycosylase CJ306_02935 PF00905 Penicillin binding protein transpeptidase domain CJ306_02940 PF13462 Thioredoxin CJ306_02950 PF08331 Domain of unknown function (DUF1730) CJ306_02955 PF12671 Putative amidase domain CJ306_02960 PF00588 SpoU rRNA Methylase family CJ306_02965 PF00990 Diguanylate cyclase, GGDEF domain CJ306_02965 PF03707 Bacterial signalling protein N terminal repeat CJ306_02965 PF00563 EAL domain CJ306_02975 PF08298 PrkA AAA domain CJ306_02975 PF06798 PrkA serine protein kinase C-terminal domain CJ306_02985 PF04285 Protein of unknown function (DUF444) CJ306_02995 PF02028 BCCT, betaine/carnitine/choline family transporter CJ306_03000 PF18496 Collagenase G catalytic helper subdomain CJ306_03000 PF08453 Peptidase family M9 N-terminal CJ306_03000 PF01752 Collagenase CJ306_03010 PF01145 SPFH domain / Band 7 family CJ306_03010 PF15975 Flotillin CJ306_03015 PF00672 HAMP domain CJ306_03015 PF02743 Cache domain CJ306_03015 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CJ306_03020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJ306_03020 PF00989 PAS fold CJ306_03020 PF17203 Single cache domain 3 CJ306_03020 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain CJ306_03025 PF00072 Response regulator receiver domain CJ306_03025 PF12431 Transcriptional regulator CJ306_03030 PF03600 Citrate transporter CJ306_03050 PF04309 Glycerol-3-phosphate responsive antiterminator CJ306_03055 PF17912 MalK OB fold domain CJ306_03055 PF00005 ABC transporter CJ306_03060 PF00528 Binding-protein-dependent transport system inner membrane component CJ306_03065 PF00528 Binding-protein-dependent transport system inner membrane component CJ306_03070 PF13416 Bacterial extracellular solute-binding protein CJ306_03075 PF00149 Calcineurin-like phosphoesterase CJ306_03080 PF00486 Transcriptional regulatory protein, C terminal CJ306_03080 PF00072 Response regulator receiver domain CJ306_03085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJ306_03085 PF00512 His Kinase A (phospho-acceptor) domain CJ306_03095 PF13529 Peptidase_C39 like family CJ306_03100 PF00672 HAMP domain CJ306_03100 PF02743 Cache domain CJ306_03100 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CJ306_03105 PF00989 PAS fold CJ306_03105 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain CJ306_03105 PF17203 Single cache domain 3 CJ306_03105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJ306_03110 PF00072 Response regulator receiver domain CJ306_03115 PF03390 2-hydroxycarboxylate transporter family CJ306_03120 PF03949 Malic enzyme, NAD binding domain CJ306_03120 PF00390 Malic enzyme, N-terminal domain CJ306_03130 PF00892 EamA-like transporter family CJ306_03135 PF00392 Bacterial regulatory proteins, gntR family CJ306_03135 PF00155 Aminotransferase class I and II CJ306_03145 PF18698 Histidine kinase sensor domain CJ306_03145 PF00672 HAMP domain CJ306_03145 PF00989 PAS fold CJ306_03145 PF00512 His Kinase A (phospho-acceptor) domain CJ306_03145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJ306_03150 PF00486 Transcriptional regulatory protein, C terminal CJ306_03150 PF00072 Response regulator receiver domain CJ306_03160 PF00583 Acetyltransferase (GNAT) family CJ306_03160 PF13508 Acetyltransferase (GNAT) domain CJ306_03165 PF02634 FdhD/NarQ family CJ306_03170 PF00037 4Fe-4S binding domain CJ306_03170 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CJ306_03170 PF00384 Molybdopterin oxidoreductase CJ306_03170 PF01568 Molydopterin dinucleotide binding domain CJ306_03170 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CJ306_03175 PF07849 Protein of unknown function (DUF1641) CJ306_03185 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CJ306_03185 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CJ306_03190 PF13520 Amino acid permease CJ306_03200 PF01022 Bacterial regulatory protein, arsR family CJ306_03205 PF00403 Heavy-metal-associated domain CJ306_03210 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family CJ306_03210 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain CJ306_03210 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain CJ306_03225 PF02868 Thermolysin metallopeptidase, alpha-helical domain CJ306_03225 PF01447 Thermolysin metallopeptidase, catalytic domain CJ306_03225 PF07504 Fungalysin/Thermolysin Propeptide Motif CJ306_03225 PF03413 Peptidase propeptide and YPEB domain CJ306_03245 PF04294 VanW like protein CJ306_03250 PF03816 Cell envelope-related transcriptional attenuator domain CJ306_03255 PF07662 Na+ dependent nucleoside transporter C-terminus CJ306_03255 PF01773 Na+ dependent nucleoside transporter N-terminus CJ306_03260 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CJ306_03265 PF01595 Cyclin M transmembrane N-terminal domain CJ306_03265 PF03471 Transporter associated domain CJ306_03265 PF00571 CBS domain CJ306_03270 PF00206 Lyase CJ306_03270 PF10415 Fumarase C C-terminus CJ306_03275 PF02652 L-lactate permease CJ306_03280 PF01022 Bacterial regulatory protein, arsR family CJ306_03285 PF08141 Small acid-soluble spore protein H family CJ306_03290 PF00854 POT family CJ306_03295 PF01497 Periplasmic binding protein CJ306_03300 PF01032 FecCD transport family CJ306_03305 PF01032 FecCD transport family CJ306_03310 PF00005 ABC transporter CJ306_03320 PF00155 Aminotransferase class I and II CJ306_03325 PF01370 NAD dependent epimerase/dehydratase family CJ306_03330 PF00293 NUDIX domain CJ306_03330 PF13344 Haloacid dehalogenase-like hydrolase CJ306_03335 PF00092 von Willebrand factor type A domain CJ306_03340 PF07728 AAA domain (dynein-related subfamily) CJ306_03345 PF13396 Phospholipase_D-nuclease N-terminal CJ306_03345 PF13091 PLD-like domain CJ306_03360 PF03707 Bacterial signalling protein N terminal repeat CJ306_03360 PF00563 EAL domain CJ306_03360 PF00990 Diguanylate cyclase, GGDEF domain CJ306_03365 PF13520 Amino acid permease CJ306_03370 PF00392 Bacterial regulatory proteins, gntR family CJ306_03370 PF07702 UTRA domain CJ306_03375 PF02378 Phosphotransferase system, EIIC CJ306_03375 PF00367 phosphotransferase system, EIIB CJ306_03380 PF16657 Maltogenic Amylase, C-terminal domain CJ306_03380 PF00128 Alpha amylase, catalytic domain CJ306_03395 PF03323 Bacillus/Clostridium GerA spore germination protein CJ306_03405 PF01636 Phosphotransferase enzyme family CJ306_03410 PF01235 Sodium:alanine symporter family CJ306_03420 PF00005 ABC transporter CJ306_03425 PF00497 Bacterial extracellular solute-binding proteins, family 3 CJ306_03430 PF00528 Binding-protein-dependent transport system inner membrane component CJ306_03435 PF00528 Binding-protein-dependent transport system inner membrane component CJ306_03440 PF00324 Amino acid permease CJ306_03455 PF08281 Sigma-70, region 4 CJ306_03455 PF04542 Sigma-70 region 2 CJ306_03465 PF08279 HTH domain CJ306_03465 PF13280 WYL domain CJ306_03470 PF01872 RibD C-terminal domain CJ306_03475 PF18698 Histidine kinase sensor domain CJ306_03475 PF00672 HAMP domain CJ306_03475 PF00512 His Kinase A (phospho-acceptor) domain CJ306_03475 PF00989 PAS fold CJ306_03475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJ306_03480 PF00072 Response regulator receiver domain CJ306_03480 PF00486 Transcriptional regulatory protein, C terminal CJ306_03500 PF00916 Sulfate permease family CJ306_03500 PF01740 STAS domain CJ306_03505 PF00582 Universal stress protein family CJ306_03515 PF07690 Major Facilitator Superfamily CJ306_03520 PF01047 MarR family CJ306_03525 PF07690 Major Facilitator Superfamily CJ306_03530 PF00356 Bacterial regulatory proteins, lacI family CJ306_03535 PF00294 pfkB family carbohydrate kinase CJ306_03540 PF05025 RbsD / FucU transport protein family CJ306_03545 PF00005 ABC transporter CJ306_03550 PF02653 Branched-chain amino acid transport system / permease component CJ306_03555 PF13407 Periplasmic binding protein domain CJ306_03560 PF00923 Transaldolase/Fructose-6-phosphate aldolase CJ306_03565 PF05547 Immune inhibitor A peptidase M6 CJ306_03580 PF00107 Zinc-binding dehydrogenase CJ306_03580 PF08240 Alcohol dehydrogenase GroES-like domain CJ306_03590 PF00882 Zinc dependent phospholipase C CJ306_03595 PF03372 Endonuclease/Exonuclease/phosphatase family CJ306_03625 PF02673 Bacitracin resistance protein BacA CJ306_03630 PF02743 Cache domain CJ306_03630 PF00672 HAMP domain CJ306_03630 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CJ306_03635 PF07501 G5 domain CJ306_03635 PF03990 G5-linked-Ubiquitin-like domain CJ306_03635 PF06725 3D domain CJ306_03640 PF01381 Helix-turn-helix CJ306_03650 PF04203 Sortase domain CJ306_03660 PF00854 POT family CJ306_03665 PF05525 Branched-chain amino acid transport protein CJ306_03680 PF00324 Amino acid permease CJ306_03685 PF00860 Permease family CJ306_03695 PF07282 Putative transposase DNA-binding domain CJ306_03695 PF01385 Probable transposase CJ306_03695 PF12323 Helix-turn-helix domain CJ306_03710 PF13673 Acetyltransferase (GNAT) domain CJ306_03720 PF02254 TrkA-N domain CJ306_03720 PF02080 TrkA-C domain CJ306_03720 PF00999 Sodium/hydrogen exchanger family CJ306_03730 PF00510 Cytochrome c oxidase subunit III CJ306_03735 PF00115 Cytochrome C and Quinol oxidase polypeptide I CJ306_03740 PF02790 Cytochrome C oxidase subunit II, transmembrane domain CJ306_03745 PF00324 Amino acid permease CJ306_03750 PF13529 Peptidase_C39 like family CJ306_03755 PF07687 Peptidase dimerisation domain CJ306_03755 PF01546 Peptidase family M20/M25/M40 CJ306_03760 PF11755 Protein of unknown function (DUF3311) CJ306_03765 PF00474 Sodium:solute symporter family CJ306_03770 PF03323 Bacillus/Clostridium GerA spore germination protein CJ306_03775 PF03845 Spore germination protein CJ306_03780 PF05504 Spore germination B3/ GerAC like, C-terminal CJ306_03790 PF02421 Ferrous iron transport protein B CJ306_03790 PF07670 Nucleoside recognition CJ306_03790 PF07664 Ferrous iron transport protein B C terminus CJ306_03790 PF17910 FeoB cytosolic helical domain CJ306_03795 PF07670 Nucleoside recognition CJ306_03795 PF02421 Ferrous iron transport protein B CJ306_03795 PF07664 Ferrous iron transport protein B C terminus CJ306_03795 PF17910 FeoB cytosolic helical domain CJ306_03800 PF07670 Nucleoside recognition CJ306_03800 PF02421 Ferrous iron transport protein B CJ306_03800 PF17910 FeoB cytosolic helical domain CJ306_03800 PF07664 Ferrous iron transport protein B C terminus CJ306_03800 PF04023 FeoA domain CJ306_03805 PF12849 PBP superfamily domain CJ306_03810 PF00528 Binding-protein-dependent transport system inner membrane component CJ306_03815 PF00528 Binding-protein-dependent transport system inner membrane component CJ306_03820 PF00873 AcrB/AcrD/AcrF family CJ306_03940 PF00571 CBS domain CJ306_03960 PF00246 Zinc carboxypeptidase CJ306_03960 PF08239 Bacterial SH3 domain CJ306_03965 PF03070 TENA/THI-4/PQQC family CJ306_03970 PF00005 ABC transporter CJ306_03975 PF00528 Binding-protein-dependent transport system inner membrane component CJ306_03980 PF09084 NMT1/THI5 like CJ306_03985 PF02581 Thiamine monophosphate synthase CJ306_03990 PF01266 FAD dependent oxidoreductase CJ306_03995 PF02597 ThiS family CJ306_04000 PF05690 Thiazole biosynthesis protein ThiG CJ306_04005 PF00899 ThiF family CJ306_04010 PF08543 Phosphomethylpyrimidine kinase CJ306_04040 PF03814 Potassium-transporting ATPase A subunit CJ306_04050 PF02669 K+-transporting ATPase, c chain CJ306_04055 PF02702 Osmosensitive K+ channel His kinase sensor domain CJ306_04060 PF07690 Major Facilitator Superfamily CJ306_04065 PF01047 MarR family CJ306_04090 PF00005 ABC transporter CJ306_04105 PF02653 Branched-chain amino acid transport system / permease component CJ306_04110 PF00005 ABC transporter CJ306_04115 PF13407 Periplasmic binding protein domain CJ306_04120 PF00860 Permease family CJ306_04130 PF17969 L,D-transpeptidase C-terminal domain CJ306_04130 PF03734 L,D-transpeptidase catalytic domain CJ306_04140 PF00294 pfkB family carbohydrate kinase CJ306_04145 PF00251 Glycosyl hydrolases family 32 N-terminal domain CJ306_04145 PF08244 Glycosyl hydrolases family 32 C terminal CJ306_04150 PF02378 Phosphotransferase system, EIIC CJ306_04150 PF00367 phosphotransferase system, EIIB CJ306_04155 PF00356 Bacterial regulatory proteins, lacI family CJ306_04155 PF13407 Periplasmic binding protein domain CJ306_04165 PF00085 Thioredoxin CJ306_04170 PF02600 Disulfide bond formation protein DsbB CJ306_04175 PF14148 YhdB-like protein CJ306_04185 PF03845 Spore germination protein CJ306_04195 PF03323 Bacillus/Clostridium GerA spore germination protein CJ306_04205 PF00881 Nitroreductase family CJ306_04210 PF04293 SpoVR like protein CJ306_04230 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJ306_04230 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CJ306_04235 PF02583 Metal-sensitive transcriptional repressor CJ306_04240 PF00581 Rhodanese-like domain CJ306_04240 PF01206 Sulfurtransferase TusA CJ306_04245 PF00581 Rhodanese-like domain CJ306_04245 PF00753 Metallo-beta-lactamase superfamily CJ306_04250 PF01206 Sulfurtransferase TusA CJ306_04260 PF00581 Rhodanese-like domain CJ306_04265 PF13686 DsrE/DsrF/DrsH-like family CJ306_04270 PF01925 Sulfite exporter TauE/SafE CJ306_04280 PF03816 Cell envelope-related transcriptional attenuator domain CJ306_04285 PF00107 Zinc-binding dehydrogenase CJ306_04285 PF08240 Alcohol dehydrogenase GroES-like domain CJ306_04290 PF02690 Na+/Pi-cotransporter CJ306_04295 PF07690 Major Facilitator Superfamily CJ306_04310 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CJ306_04310 PF05043 Mga helix-turn-helix domain CJ306_04310 PF00874 PRD domain CJ306_04310 PF08279 HTH domain CJ306_04315 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CJ306_04320 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CJ306_04325 PF02378 Phosphotransferase system, EIIC CJ306_04340 PF06725 3D domain CJ306_04340 PF01476 LysM domain CJ306_04345 PF12704 MacB-like periplasmic core domain CJ306_04345 PF02687 FtsX-like permease family CJ306_04350 PF00005 ABC transporter CJ306_04360 PF09529 Integral membrane protein (intg_mem_TP0381) CJ306_04375 PF05525 Branched-chain amino acid transport protein CJ306_04380 PF05067 Manganese containing catalase CJ306_04385 PF12652 CotJB protein CJ306_04390 PF11007 Spore coat associated protein JA (CotJA) CJ306_04405 PF02735 Ku70/Ku80 beta-barrel domain CJ306_04415 PF09335 SNARE associated Golgi protein CJ306_04450 PF13520 Amino acid permease CJ306_04455 PF00999 Sodium/hydrogen exchanger family CJ306_04465 PF01380 SIS domain CJ306_04465 PF01418 Helix-turn-helix domain, rpiR family CJ306_04470 PF13580 SIS domain CJ306_04475 PF00367 phosphotransferase system, EIIB CJ306_04475 PF02378 Phosphotransferase system, EIIC CJ306_04485 PF07681 DoxX CJ306_04500 PF00892 EamA-like transporter family CJ306_04505 PF01037 Lrp/AsnC ligand binding domain CJ306_04510 PF00206 Lyase CJ306_04510 PF14698 Argininosuccinate lyase C-terminal CJ306_04510 PF00583 Acetyltransferase (GNAT) family CJ306_04520 PF13411 MerR HTH family regulatory protein CJ306_04525 PF00893 Small Multidrug Resistance protein CJ306_04535 PF17934 Tetracyclin repressor-like, C-terminal domain CJ306_04535 PF00440 Bacterial regulatory proteins, tetR family CJ306_04540 PF07690 Major Facilitator Superfamily CJ306_04550 PF01638 HxlR-like helix-turn-helix CJ306_04560 PF02525 Flavodoxin-like fold CJ306_04565 PF12793 Sugar transport-related sRNA regulator N-term CJ306_04565 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CJ306_04570 PF07690 Major Facilitator Superfamily CJ306_04580 PF01965 DJ-1/PfpI family CJ306_04585 PF06628 Catalase-related immune-responsive CJ306_04585 PF18011 C-terminal domain found in long catalases CJ306_04585 PF00199 Catalase CJ306_04595 PF13520 Amino acid permease CJ306_04600 PF01177 Asp/Glu/Hydantoin racemase CJ306_04610 PF00171 Aldehyde dehydrogenase family CJ306_04630 PF00664 ABC transporter transmembrane region CJ306_04630 PF00005 ABC transporter CJ306_04635 PF00005 ABC transporter CJ306_04635 PF00664 ABC transporter transmembrane region CJ306_04645 PF00497 Bacterial extracellular solute-binding proteins, family 3 CJ306_04650 PF00528 Binding-protein-dependent transport system inner membrane component CJ306_04655 PF00005 ABC transporter CJ306_04660 PF00269 Small, acid-soluble spore proteins, alpha/beta type CJ306_04670 PF14398 YheC/D like ATP-grasp CJ306_04680 PF04286 Protein of unknown function (DUF445) CJ306_04685 PF06133 Control of competence regulator ComK, YlbF/YmcA CJ306_04700 PF00205 Thiamine pyrophosphate enzyme, central domain CJ306_04700 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CJ306_04700 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CJ306_04705 PF03306 Alpha-acetolactate decarboxylase CJ306_04710 PF02245 Methylpurine-DNA glycosylase (MPG) CJ306_04720 PF00746 LPXTG cell wall anchor motif CJ306_04720 PF04650 YSIRK type signal peptide CJ306_04720 PF17210 SdrD B-like domain CJ306_04720 PF17961 Bacterial Ig domain CJ306_04720 PF10425 C-terminus of bacterial fibrinogen-binding adhesin CJ306_04725 PF01510 N-acetylmuramoyl-L-alanine amidase CJ306_04725 PF01471 Putative peptidoglycan binding domain CJ306_04730 PF04055 Radical SAM superfamily CJ306_04740 PF13193 AMP-binding enzyme C-terminal domain CJ306_04740 PF00501 AMP-binding enzyme CJ306_04755 PF01740 STAS domain CJ306_04755 PF00916 Sulfate permease family CJ306_04760 PF01943 Polysaccharide biosynthesis protein CJ306_04760 PF14667 Polysaccharide biosynthesis C-terminal domain CJ306_04780 PF00378 Enoyl-CoA hydratase/isomerase CJ306_04800 PF05343 M42 glutamyl aminopeptidase CJ306_04805 PF01520 N-acetylmuramoyl-L-alanine amidase CJ306_04805 PF00395 S-layer homology domain CJ306_04815 PF11121 Protein of unknown function (DUF2639) CJ306_04820 PF05544 Proline racemase CJ306_04825 PF02423 Ornithine cyclodeaminase/mu-crystallin family CJ306_04830 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CJ306_04835 PF00528 Binding-protein-dependent transport system inner membrane component CJ306_04840 PF00528 Binding-protein-dependent transport system inner membrane component CJ306_04840 PF12911 N-terminal TM domain of oligopeptide transport permease C CJ306_04845 PF00005 ABC transporter CJ306_04845 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CJ306_04850 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CJ306_04850 PF00005 ABC transporter CJ306_04860 PF16123 Hydroxyacylglutathione hydrolase C-terminus CJ306_04860 PF00753 Metallo-beta-lactamase superfamily CJ306_04890 PF06013 Proteins of 100 residues with WXG CJ306_04905 PF04740 LXG domain of WXG superfamily CJ306_04905 PF14436 Bacterial EndoU nuclease CJ306_05025 PF00083 Sugar (and other) transporter CJ306_05030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJ306_05030 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain CJ306_05035 PF12431 Transcriptional regulator CJ306_05035 PF00072 Response regulator receiver domain CJ306_05035 PF08279 HTH domain CJ306_05040 PF03401 Tripartite tricarboxylate transporter family receptor CJ306_05045 PF00293 NUDIX domain CJ306_05050 PF04851 Type III restriction enzyme, res subunit CJ306_05050 PF08463 EcoEI R protein C-terminal CJ306_05050 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) CJ306_05050 PF00271 Helicase conserved C-terminal domain CJ306_05060 PF03796 DnaB-like helicase C terminal domain CJ306_05060 PF00772 DnaB-like helicase N terminal domain CJ306_05070 PF01925 Sulfite exporter TauE/SafE CJ306_05085 PF07690 Major Facilitator Superfamily CJ306_05095 PF09680 Family of unknown function CJ306_05100 PF13302 Acetyltransferase (GNAT) domain CJ306_05125 PF13026 Protein of unknown function (DUF3887) CJ306_05125 PF12146 Serine aminopeptidase, S33 CJ306_05175 PF01066 CDP-alcohol phosphatidyltransferase CJ306_05190 PF02733 Dak1 domain CJ306_05200 PF02733 Dak1 domain CJ306_05205 PF02525 Flavodoxin-like fold CJ306_05210 PF02082 Transcriptional regulator CJ306_05260 PF06725 3D domain CJ306_05260 PF01476 LysM domain CJ306_05265 PF00877 NlpC/P60 family CJ306_05265 PF01476 LysM domain CJ306_05275 PF00395 S-layer homology domain CJ306_05320 PF11181 Heat induced stress protein YflT CJ306_05325 PF05532 CsbD-like CJ306_05340 PF01740 STAS domain CJ306_05345 PF13581 Histidine kinase-like ATPase domain CJ306_05350 PF04545 Sigma-70, region 4 CJ306_05350 PF04542 Sigma-70 region 2 CJ306_05350 PF04539 Sigma-70 region 3 CJ306_05360 PF07228 Stage II sporulation protein E (SpoIIE) CJ306_05360 PF13426 PAS domain CJ306_05365 PF03705 CheR methyltransferase, all-alpha domain CJ306_05365 PF01739 CheR methyltransferase, SAM binding domain CJ306_05370 PF00672 HAMP domain CJ306_05370 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CJ306_05370 PF00072 Response regulator receiver domain CJ306_05370 PF01627 Hpt domain CJ306_05370 PF00512 His Kinase A (phospho-acceptor) domain CJ306_05370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJ306_05395 PF01906 Putative heavy-metal-binding CJ306_05410 PF08240 Alcohol dehydrogenase GroES-like domain CJ306_05410 PF00107 Zinc-binding dehydrogenase CJ306_05415 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family CJ306_05420 PF11121 Protein of unknown function (DUF2639) CJ306_05435 PF00149 Calcineurin-like phosphoesterase CJ306_05440 PF13514 AAA domain CJ306_05445 PF01966 HD domain CJ306_05445 PF01336 OB-fold nucleic acid binding domain CJ306_05450 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CJ306_05455 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CJ306_05460 PF17874 MalT-like TPR region CJ306_05460 PF18801 response regulator aspartate phosphatase H, N terminal CJ306_05470 PF08386 TAP-like protein CJ306_05470 PF00561 alpha/beta hydrolase fold CJ306_05475 PF14147 Sporulation protein YhaL CJ306_05495 PF00190 Cupin CJ306_05505 PF04309 Glycerol-3-phosphate responsive antiterminator CJ306_05510 PF00230 Major intrinsic protein CJ306_05515 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CJ306_05515 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CJ306_05520 PF01266 FAD dependent oxidoreductase CJ306_05520 PF16901 C-terminal domain of alpha-glycerophosphate oxidase CJ306_05525 PF03551 Transcriptional regulator PadR-like family CJ306_05540 PF04542 Sigma-70 region 2 CJ306_05540 PF08281 Sigma-70, region 4 CJ306_05565 PF13538 UvrD-like helicase C-terminal domain CJ306_05595 PF01047 MarR family CJ306_05600 PF12732 YtxH-like protein CJ306_05605 PF01230 HIT domain CJ306_05615 PF00005 ABC transporter CJ306_05620 PF05975 Bacterial ABC transporter protein EcsB CJ306_05625 PF12787 EcsC protein family CJ306_05645 PF03703 Bacterial PH domain CJ306_05650 PF03703 Bacterial PH domain CJ306_05675 PF10014 2OG-Fe dioxygenase CJ306_05680 PF00892 EamA-like transporter family CJ306_05685 PF03703 Bacterial PH domain CJ306_05690 PF03703 Bacterial PH domain CJ306_05700 PF03992 Antibiotic biosynthesis monooxygenase CJ306_05705 PF00905 Penicillin binding protein transpeptidase domain CJ306_05705 PF00912 Transglycosylase CJ306_05710 PF01208 Uroporphyrinogen decarboxylase (URO-D) CJ306_05745 PF03965 Penicillinase repressor CJ306_05755 PF17932 Tetracyclin repressor-like, C-terminal domain CJ306_05755 PF00440 Bacterial regulatory proteins, tetR family CJ306_05780 PF13302 Acetyltransferase (GNAT) domain CJ306_05790 PF13280 WYL domain CJ306_05790 PF08279 HTH domain CJ306_05795 PF00356 Bacterial regulatory proteins, lacI family CJ306_05800 PF14149 YhfH-like protein CJ306_05805 PF12706 Beta-lactamase superfamily domain CJ306_05810 PF03099 Biotin/lipoate A/B protein ligase family CJ306_05810 PF10437 Bacterial lipoate protein ligase C-terminus CJ306_05820 PF00501 AMP-binding enzyme CJ306_05820 PF13193 AMP-binding enzyme C-terminal domain CJ306_05825 PF05593 RHS Repeat CJ306_05955 PF07968 Leukocidin/Hemolysin toxin family CJ306_05960 PF00149 Calcineurin-like phosphoesterase CJ306_05965 PF01966 HD domain CJ306_05970 PF04542 Sigma-70 region 2 CJ306_05970 PF08281 Sigma-70, region 4 CJ306_05975 PF06445 GyrI-like small molecule binding domain CJ306_05975 PF12833 Helix-turn-helix domain CJ306_05985 PF00512 His Kinase A (phospho-acceptor) domain CJ306_05985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJ306_05990 PF00072 Response regulator receiver domain CJ306_05990 PF00486 Transcriptional regulatory protein, C terminal CJ306_06010 PF16491 CAAX prenyl protease N-terminal, five membrane helices CJ306_06010 PF01435 Peptidase family M48 CJ306_06015 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CJ306_06015 PF00672 HAMP domain CJ306_06015 PF02743 Cache domain CJ306_06020 PF00395 S-layer homology domain CJ306_06020 PF06452 Carbohydrate family 9 binding domain-like CJ306_06020 PF00331 Glycosyl hydrolase family 10 CJ306_06020 PF02018 Carbohydrate binding domain CJ306_06030 PF01274 Malate synthase CJ306_06035 PF00463 Isocitrate lyase family CJ306_06060 PF00313 'Cold-shock' DNA-binding domain CJ306_06080 PF09335 SNARE associated Golgi protein CJ306_06085 PF10502 Signal peptidase, peptidase S26 CJ306_06090 PF13361 UvrD-like helicase C-terminal domain CJ306_06090 PF12705 PD-(D/E)XK nuclease superfamily CJ306_06095 PF00580 UvrD/REP helicase N-terminal domain CJ306_06095 PF13361 UvrD-like helicase C-terminal domain CJ306_06095 PF12705 PD-(D/E)XK nuclease superfamily CJ306_06105 PF10676 Spore germination protein gerPA/gerPF CJ306_06110 PF10970 Spore germination protein GerPE CJ306_06120 PF10737 Spore germination protein GerPC CJ306_06125 PF10803 Spore germination GerPB CJ306_06130 PF10676 Spore germination protein gerPA/gerPF CJ306_06135 PF09388 Spo0E like sporulation regulatory protein CJ306_06140 PF01557 Fumarylacetoacetate (FAA) hydrolase family CJ306_06150 PF00202 Aminotransferase class-III CJ306_06155 PF07457 Protein of unknown function (DUF1516) CJ306_06165 PF13537 Glutamine amidotransferase domain CJ306_06165 PF00733 Asparagine synthase CJ306_06175 PF06628 Catalase-related immune-responsive CJ306_06175 PF00199 Catalase CJ306_06180 PF00909 Ammonium Transporter Family CJ306_06185 PF00128 Alpha amylase, catalytic domain CJ306_06200 PF04461 Protein of unknown function (DUF520) CJ306_06205 PF17783 CvfB-like winged helix domain CJ306_06205 PF13509 S1 domain CJ306_06220 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CJ306_06220 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CJ306_06225 PF12758 Protein of unknown function (DUF3813) CJ306_06245 PF14168 YjzC-like protein CJ306_06250 PF02861 Clp amino terminal domain, pathogenicity island component CJ306_06250 PF07724 AAA domain (Cdc48 subfamily) CJ306_06250 PF10431 C-terminal, D2-small domain, of ClpB protein CJ306_06250 PF00004 ATPase family associated with various cellular activities (AAA) CJ306_06250 PF17871 AAA lid domain CJ306_06270 PF10815 ComZ CJ306_06275 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CJ306_06275 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CJ306_06280 PF02801 Beta-ketoacyl synthase, C-terminal domain CJ306_06280 PF00109 Beta-ketoacyl synthase, N-terminal domain CJ306_06285 PF10026 Predicted Zn-dependent protease (DUF2268) CJ306_06290 PF12227 Protein of unknown function (DUF3603) CJ306_06300 PF00579 tRNA synthetases class I (W and Y) CJ306_06315 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CJ306_06320 PF00528 Binding-protein-dependent transport system inner membrane component CJ306_06325 PF00528 Binding-protein-dependent transport system inner membrane component CJ306_06325 PF12911 N-terminal TM domain of oligopeptide transport permease C CJ306_06330 PF00005 ABC transporter CJ306_06330 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CJ306_06335 PF00005 ABC transporter CJ306_06335 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CJ306_06340 PF01554 MatE CJ306_06345 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CJ306_06360 PF03960 ArsC family CJ306_06365 PF03741 Integral membrane protein TerC family CJ306_06370 PF05389 Negative regulator of genetic competence (MecA) CJ306_06375 PF13091 PLD-like domain CJ306_06375 PF13396 Phospholipase_D-nuclease N-terminal CJ306_06385 PF01432 Peptidase family M3 CJ306_06385 PF08439 Oligopeptidase F CJ306_06400 PF01152 Bacterial-like globin CJ306_06405 PF01928 CYTH domain CJ306_06415 PF04607 Region found in RelA / SpoT proteins CJ306_06420 PF01513 ATP-NAD kinase CJ306_06425 PF00849 RNA pseudouridylate synthase CJ306_06435 PF00149 Calcineurin-like phosphoesterase CJ306_06440 PF01098 Cell cycle protein CJ306_06445 PF00535 Glycosyl transferase family 2 CJ306_06450 PF08241 Methyltransferase domain CJ306_06455 PF05711 Macrocin-O-methyltransferase (TylF) CJ306_06465 PF13181 Tetratricopeptide repeat CJ306_06465 PF00535 Glycosyl transferase family 2 CJ306_06485 PF00483 Nucleotidyl transferase CJ306_06490 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase CJ306_06495 PF16363 GDP-mannose 4,6 dehydratase CJ306_06500 PF04321 RmlD substrate binding domain CJ306_06520 PF07098 Protein of unknown function (DUF1360) CJ306_06540 PF00580 UvrD/REP helicase N-terminal domain CJ306_06540 PF13361 UvrD-like helicase C-terminal domain CJ306_06545 PF13673 Acetyltransferase (GNAT) domain CJ306_06555 PF00756 Putative esterase CJ306_06570 PF02368 Bacterial Ig-like domain (group 2) CJ306_06575 PF00474 Sodium:solute symporter family CJ306_06590 PF02885 Glycosyl transferase family, helical bundle domain CJ306_06590 PF00117 Glutamine amidotransferase class-I CJ306_06590 PF00591 Glycosyl transferase family, a/b domain CJ306_06595 PF00591 Glycosyl transferase family, a/b domain CJ306_06595 PF02885 Glycosyl transferase family, helical bundle domain CJ306_06600 PF00218 Indole-3-glycerol phosphate synthase CJ306_06605 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase CJ306_06610 PF00291 Pyridoxal-phosphate dependent enzyme CJ306_06615 PF00290 Tryptophan synthase alpha chain CJ306_06625 PF02652 L-lactate permease CJ306_06630 PF10042 Uncharacterized conserved protein (DUF2278) CJ306_06660 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJ306_06660 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CJ306_06670 PF00881 Nitroreductase family CJ306_06685 PF02817 e3 binding domain CJ306_06685 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CJ306_06685 PF00364 Biotin-requiring enzyme CJ306_06690 PF16870 2-oxoglutarate dehydrogenase C-terminal CJ306_06690 PF02779 Transketolase, pyrimidine binding domain CJ306_06690 PF00676 Dehydrogenase E1 component CJ306_06695 PF01381 Helix-turn-helix CJ306_06755 PF07943 Penicillin-binding protein 5, C-terminal domain CJ306_06755 PF00768 D-alanyl-D-alanine carboxypeptidase CJ306_06765 PF12389 Camelysin metallo-endopeptidase CJ306_06775 PF12389 Camelysin metallo-endopeptidase CJ306_06780 PF01381 Helix-turn-helix CJ306_06780 PF08671 Anti-repressor SinI CJ306_06790 PF05547 Immune inhibitor A peptidase M6 CJ306_06795 PF00171 Aldehyde dehydrogenase family CJ306_06800 PF00005 ABC transporter CJ306_06800 PF08402 TOBE domain CJ306_06805 PF00528 Binding-protein-dependent transport system inner membrane component CJ306_06810 PF00528 Binding-protein-dependent transport system inner membrane component CJ306_06815 PF13416 Bacterial extracellular solute-binding protein CJ306_06820 PF01569 PAP2 superfamily CJ306_06825 PF03176 MMPL family CJ306_06835 PF00849 RNA pseudouridylate synthase CJ306_06835 PF01479 S4 domain CJ306_06845 PF00188 Cysteine-rich secretory protein family CJ306_06850 PF02754 Cysteine-rich domain CJ306_06850 PF13183 4Fe-4S dicluster domain CJ306_06855 PF02913 FAD linked oxidases, C-terminal domain CJ306_06855 PF01565 FAD binding domain CJ306_06860 PF13556 PucR C-terminal helix-turn-helix domain CJ306_06860 PF17853 GGDEF-like domain CJ306_06860 PF05651 Putative sugar diacid recognition CJ306_06870 PF00072 Response regulator receiver domain CJ306_06870 PF00486 Transcriptional regulatory protein, C terminal CJ306_06875 PF00672 HAMP domain CJ306_06875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJ306_06875 PF00989 PAS fold CJ306_06875 PF00512 His Kinase A (phospho-acceptor) domain CJ306_06875 PF18698 Histidine kinase sensor domain CJ306_06880 PF00392 Bacterial regulatory proteins, gntR family CJ306_06880 PF07729 FCD domain CJ306_06885 PF02754 Cysteine-rich domain CJ306_06890 PF13183 4Fe-4S dicluster domain CJ306_06890 PF11870 Domain of unknown function (DUF3390) CJ306_06890 PF02589 LUD domain CJ306_06895 PF02589 LUD domain CJ306_06900 PF01478 Type IV leader peptidase family CJ306_06900 PF06750 Bacterial Peptidase A24 N-terminal domain CJ306_06910 PF01226 Formate/nitrite transporter CJ306_06915 PF03741 Integral membrane protein TerC family CJ306_06920 PF02386 Cation transport protein CJ306_06925 PF00269 Small, acid-soluble spore proteins, alpha/beta type CJ306_06935 PF01575 MaoC like domain CJ306_06960 PF00561 alpha/beta hydrolase fold CJ306_06970 PF02386 Cation transport protein CJ306_06995 PF08402 TOBE domain CJ306_06995 PF00005 ABC transporter CJ306_07000 PF00528 Binding-protein-dependent transport system inner membrane component CJ306_07005 PF13419 Haloacid dehalogenase-like hydrolase CJ306_07010 PF00266 Aminotransferase class-V CJ306_07020 PF08220 DeoR-like helix-turn-helix domain CJ306_07020 PF00455 DeoR C terminal sensor domain CJ306_07035 PF00596 Class II Aldolase and Adducin N-terminal domain CJ306_07045 PF04748 Divergent polysaccharide deacetylase CJ306_07050 PF09388 Spo0E like sporulation regulatory protein CJ306_07055 PF00512 His Kinase A (phospho-acceptor) domain CJ306_07055 PF02743 Cache domain CJ306_07055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJ306_07060 PF01047 MarR family CJ306_07070 PF12867 DinB superfamily CJ306_07080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJ306_07080 PF13426 PAS domain CJ306_07080 PF13188 PAS domain CJ306_07080 PF00989 PAS fold CJ306_07080 PF00512 His Kinase A (phospho-acceptor) domain CJ306_07085 PF06508 Queuosine biosynthesis protein QueC CJ306_07090 PF01242 6-pyruvoyl tetrahydropterin synthase CJ306_07095 PF04055 Radical SAM superfamily CJ306_07100 PF14489 QueF-like protein CJ306_07105 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) CJ306_07140 PF07972 NrdI Flavodoxin like CJ306_07165 PF13392 HNH endonuclease CJ306_07170 PF00268 Ribonucleotide reductase, small chain CJ306_07175 PF00392 Bacterial regulatory proteins, gntR family CJ306_07180 PF00005 ABC transporter CJ306_07190 PF00005 ABC transporter CJ306_07210 PF01037 Lrp/AsnC ligand binding domain CJ306_07220 PF00857 Isochorismatase family CJ306_07230 PF02016 LD-carboxypeptidase N-terminal domain CJ306_07230 PF17676 LD-carboxypeptidase C-terminal domain CJ306_07235 PF03060 Nitronate monooxygenase CJ306_07240 PF04914 DltD protein CJ306_07245 PF00550 Phosphopantetheine attachment site CJ306_07250 PF03062 MBOAT, membrane-bound O-acyltransferase family CJ306_07255 PF13193 AMP-binding enzyme C-terminal domain CJ306_07255 PF00501 AMP-binding enzyme CJ306_07265 PF07687 Peptidase dimerisation domain CJ306_07265 PF01546 Peptidase family M20/M25/M40 CJ306_07275 PF00258 Flavodoxin CJ306_07315 PF01554 MatE CJ306_07320 PF02673 Bacitracin resistance protein BacA CJ306_07335 PF01047 MarR family CJ306_07345 PF00375 Sodium:dicarboxylate symporter family CJ306_07350 PF02386 Cation transport protein CJ306_07360 PF09579 Sporulation protein YtfJ (Spore_YtfJ) CJ306_07375 PF03698 Uncharacterised protein family (UPF0180) CJ306_07390 PF01063 Amino-transferase class IV CJ306_07395 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CJ306_07395 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CJ306_07395 PF00205 Thiamine pyrophosphate enzyme, central domain CJ306_07400 PF10369 Small subunit of acetolactate synthase CJ306_07400 PF01842 ACT domain CJ306_07405 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CJ306_07405 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain CJ306_07410 PF00682 HMGL-like CJ306_07410 PF08502 LeuA allosteric (dimerisation) domain CJ306_07415 PF00180 Isocitrate/isopropylmalate dehydrogenase CJ306_07420 PF00330 Aconitase family (aconitate hydratase) CJ306_07425 PF00694 Aconitase C-terminal domain CJ306_07430 PF13393 Histidyl-tRNA synthetase CJ306_07435 PF01634 ATP phosphoribosyltransferase CJ306_07440 PF00815 Histidinol dehydrogenase CJ306_07445 PF00475 Imidazoleglycerol-phosphate dehydratase CJ306_07450 PF00117 Glutamine amidotransferase class-I CJ306_07455 PF00977 Histidine biosynthesis protein CJ306_07460 PF00977 Histidine biosynthesis protein CJ306_07465 PF01502 Phosphoribosyl-AMP cyclohydrolase CJ306_07470 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase CJ306_07475 PF02811 PHP domain CJ306_07485 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CJ306_07485 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CJ306_07490 PF01066 CDP-alcohol phosphatidyltransferase CJ306_07495 PF00884 Sulfatase CJ306_07505 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CJ306_07505 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CJ306_07515 PF01507 Phosphoadenosine phosphosulfate reductase family CJ306_07520 PF01747 ATP-sulfurylase CJ306_07520 PF14306 PUA-like domain CJ306_07530 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CJ306_07530 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CJ306_07540 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CJ306_07545 PF01903 CbiX CJ306_07560 PF00209 Sodium:neurotransmitter symporter family CJ306_07570 PF00375 Sodium:dicarboxylate symporter family CJ306_07580 PF03553 Na+/H+ antiporter family CJ306_07595 PF09922 Cell wall-active antibiotics response 4TMS YvqF CJ306_07600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJ306_07600 PF00672 HAMP domain CJ306_07600 PF07730 Histidine kinase CJ306_07605 PF00072 Response regulator receiver domain CJ306_07605 PF00196 Bacterial regulatory proteins, luxR family CJ306_07615 PF05525 Branched-chain amino acid transport protein CJ306_07625 PF01209 ubiE/COQ5 methyltransferase family CJ306_07650 PF00970 Oxidoreductase FAD-binding domain CJ306_07650 PF00175 Oxidoreductase NAD-binding domain CJ306_07650 PF00042 Globin CJ306_07670 PF01925 Sulfite exporter TauE/SafE CJ306_07675 PF01384 Phosphate transporter family CJ306_07680 PF01865 Protein of unknown function DUF47 CJ306_07685 PF00912 Transglycosylase CJ306_07685 PF00905 Penicillin binding protein transpeptidase domain CJ306_07700 PF00989 PAS fold CJ306_07700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJ306_07700 PF00512 His Kinase A (phospho-acceptor) domain CJ306_07705 PF01904 Protein of unknown function DUF72 CJ306_07715 PF00589 Phage integrase family CJ306_07720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJ306_07720 PF16736 Single Cache-like CJ306_07720 PF00989 PAS fold CJ306_07720 PF00512 His Kinase A (phospho-acceptor) domain CJ306_07725 PF01048 Phosphorylase superfamily CJ306_07735 PF03706 Lysylphosphatidylglycerol synthase TM region CJ306_07735 PF09924 Uncharacterised conserved protein (DUF2156) CJ306_07750 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CJ306_07750 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CJ306_07755 PF07943 Penicillin-binding protein 5, C-terminal domain CJ306_07755 PF00768 D-alanyl-D-alanine carboxypeptidase CJ306_07760 PF07670 Nucleoside recognition CJ306_07765 PF07670 Nucleoside recognition CJ306_07770 PF00849 RNA pseudouridylate synthase CJ306_07770 PF01479 S4 domain CJ306_07775 PF00578 AhpC/TSA family CJ306_07780 PF05140 ResB-like family CJ306_07785 PF01578 Cytochrome C assembly protein CJ306_07790 PF00072 Response regulator receiver domain CJ306_07790 PF00486 Transcriptional regulatory protein, C terminal CJ306_07795 PF00989 PAS fold CJ306_07795 PF00672 HAMP domain CJ306_07795 PF00512 His Kinase A (phospho-acceptor) domain CJ306_07795 PF18698 Histidine kinase sensor domain CJ306_07795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJ306_07800 PF01923 Cobalamin adenosyltransferase CJ306_07815 PF12822 ECF transporter, substrate-specific component CJ306_07830 PF00271 Helicase conserved C-terminal domain CJ306_07830 PF00270 DEAD/DEAH box helicase CJ306_07835 PF02517 CPBP intramembrane metalloprotease CJ306_07845 PF00149 Calcineurin-like phosphoesterase CJ306_07850 PF13411 MerR HTH family regulatory protein CJ306_07855 PF05389 Negative regulator of genetic competence (MecA) CJ306_07860 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CJ306_07860 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CJ306_07885 PF00710 Asparaginase, N-terminal CJ306_07885 PF17763 Glutaminase/Asparaginase C-terminal domain CJ306_07895 PF02224 Cytidylate kinase CJ306_07900 PF00575 S1 RNA binding domain CJ306_07905 PF01070 FMN-dependent dehydrogenase CJ306_07910 PF14140 YpzI-like protein CJ306_07920 PF14045 YIEGIA protein CJ306_07930 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CJ306_07930 PF01926 50S ribosome-binding GTPase CJ306_07935 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CJ306_07935 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CJ306_07945 PF10966 Protein of unknown function (DUF2768) CJ306_07955 PF09547 Stage IV sporulation protein A (spore_IV_A) CJ306_07960 PF00216 Bacterial DNA-binding protein CJ306_07965 PF01227 GTP cyclohydrolase I CJ306_07970 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 CJ306_07975 PF01209 ubiE/COQ5 methyltransferase family CJ306_07980 PF00348 Polyprenyl synthetase CJ306_07985 PF00334 Nucleoside diphosphate kinase CJ306_07990 PF01264 Chorismate synthase CJ306_07995 PF01761 3-dehydroquinate synthase CJ306_08000 PF00155 Aminotransferase class I and II CJ306_08010 PF08858 IDEAL domain CJ306_08010 PF08864 UPF0302 domain CJ306_08015 PF10673 Protein of unknown function (DUF2487) CJ306_08020 PF00355 Rieske [2Fe-2S] domain CJ306_08025 PF00033 Cytochrome b/b6/petB CJ306_08030 PF00032 Cytochrome b(C-terminal)/b6/petD CJ306_08030 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CJ306_08035 PF07187 Protein of unknown function (DUF1405) CJ306_08045 PF09577 Sporulation protein YpjB (SpoYpjB) CJ306_08050 PF04298 Putative neutral zinc metallopeptidase CJ306_08060 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CJ306_08060 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CJ306_08070 PF03819 MazG nucleotide pyrophosphohydrolase domain CJ306_08075 PF01113 Dihydrodipicolinate reductase, N-terminus CJ306_08075 PF05173 Dihydrodipicolinate reductase, C-terminus CJ306_08080 PF02142 MGS-like domain CJ306_08085 PF02585 GlcNAc-PI de-N-acetylase CJ306_08090 PF00534 Glycosyl transferases group 1 CJ306_08090 PF13439 Glycosyltransferase Family 4 CJ306_08095 PF12627 Probable RNA and SrmB- binding site of polymerase A CJ306_08095 PF13735 tRNA nucleotidyltransferase domain 2 putative CJ306_08095 PF01743 Poly A polymerase head domain CJ306_08100 PF03099 Biotin/lipoate A/B protein ligase family CJ306_08100 PF08279 HTH domain CJ306_08100 PF02237 Biotin protein ligase C terminal domain CJ306_08115 PF02548 Ketopantoate hydroxymethyltransferase CJ306_08120 PF02569 Pantoate-beta-alanine ligase CJ306_08125 PF02261 Aspartate decarboxylase CJ306_08130 PF00929 Exonuclease CJ306_08130 PF04851 Type III restriction enzyme, res subunit CJ306_08130 PF13307 Helicase C-terminal domain CJ306_08135 PF14084 Protein of unknown function (DUF4264) CJ306_08145 PF00155 Aminotransferase class I and II CJ306_08150 PF07261 Replication initiation and membrane attachment CJ306_08155 PF00633 Helix-hairpin-helix motif CJ306_08155 PF10576 Iron-sulfur binding domain of endonuclease III CJ306_08155 PF00730 HhH-GPD superfamily base excision DNA repair protein CJ306_08165 PF00912 Transglycosylase CJ306_08165 PF00905 Penicillin binding protein transpeptidase domain CJ306_08170 PF03838 Recombination protein U CJ306_08175 PF10720 Protein of unknown function (DUF2515) CJ306_08210 PF06908 YspA SLOG family CJ306_08215 PF05103 DivIVA protein CJ306_08225 PF01170 Putative RNA methylase family UPF0020 CJ306_08225 PF02926 THUMP domain CJ306_08235 PF13307 Helicase C-terminal domain CJ306_08240 PF02074 Carboxypeptidase Taq (M32) metallopeptidase CJ306_08250 PF00557 Metallopeptidase family M24 CJ306_08255 PF00156 Phosphoribosyl transferase domain CJ306_08260 PF00860 Permease family CJ306_08265 PF04235 Protein of unknown function (DUF418) CJ306_08275 PF00350 Dynamin family CJ306_08285 PF00583 Acetyltransferase (GNAT) family CJ306_08290 PF10752 Protein of unknown function (DUF2533) CJ306_08295 PF00581 Rhodanese-like domain CJ306_08330 PF00689 Cation transporting ATPase, C-terminus CJ306_08330 PF00690 Cation transporter/ATPase, N-terminus CJ306_08335 PF01367 5'-3' exonuclease, C-terminal SAM fold CJ306_08335 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CJ306_08350 PF02706 Chain length determinant protein CJ306_08350 PF13807 G-rich domain on putative tyrosine kinase CJ306_08360 PF02397 Bacterial sugar transferase CJ306_08375 PF00535 Glycosyl transferase family 2 CJ306_08380 PF00534 Glycosyl transferases group 1 CJ306_08380 PF13439 Glycosyltransferase Family 4 CJ306_08395 PF13673 Acetyltransferase (GNAT) domain CJ306_08395 PF18014 Acetyltransferase (GNAT) domain CJ306_08415 PF13456 Reverse transcriptase-like CJ306_08420 PF01263 Aldose 1-epimerase CJ306_08445 PF00313 'Cold-shock' DNA-binding domain CJ306_08450 PF08892 YqcI/YcgG family CJ306_08455 PF01810 LysE type translocator CJ306_08475 PF00474 Sodium:solute symporter family CJ306_08480 PF00202 Aminotransferase class-III CJ306_08490 PF00999 Sodium/hydrogen exchanger family CJ306_08495 PF17770 Ribonuclease J C-terminal domain CJ306_08495 PF00753 Metallo-beta-lactamase superfamily CJ306_08495 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CJ306_08500 PF13411 MerR HTH family regulatory protein CJ306_08500 PF06445 GyrI-like small molecule binding domain CJ306_08515 PF04239 Protein of unknown function (DUF421) CJ306_08520 PF02698 DUF218 domain CJ306_08530 PF00881 Nitroreductase family CJ306_08555 PF17209 Hfq protein CJ306_08565 PF01618 MotA/TolQ/ExbB proton channel family CJ306_08570 PF00691 OmpA family CJ306_08570 PF13677 Membrane MotB of proton-channel complex MotA/MotB CJ306_08575 PF00072 Response regulator receiver domain CJ306_08580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJ306_08580 PF01627 Hpt domain CJ306_08580 PF02895 Signal transducing histidine kinase, homodimeric domain CJ306_08580 PF07194 P2 response regulator binding domain CJ306_08580 PF01584 CheW-like domain CJ306_08585 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CJ306_08585 PF04509 CheC-like family CJ306_08600 PF03705 CheR methyltransferase, all-alpha domain CJ306_08600 PF01739 CheR methyltransferase, SAM binding domain CJ306_08620 PF00460 Flagella basal body rod protein CJ306_08620 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CJ306_08625 PF00669 Bacterial flagellin N-terminal helical region CJ306_08625 PF00700 Bacterial flagellin C-terminal helical region CJ306_08630 PF02465 Flagellar hook-associated protein 2 N-terminus CJ306_08630 PF07195 Flagellar hook-associated protein 2 C-terminus CJ306_08630 PF07196 Flagellin hook IN motif CJ306_08645 PF00460 Flagella basal body rod protein CJ306_08650 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CJ306_08650 PF00460 Flagella basal body rod protein CJ306_08655 PF02049 Flagellar hook-basal body complex protein FliE CJ306_08660 PF08345 Flagellar M-ring protein C-terminal CJ306_08660 PF01514 Secretory protein of YscJ/FliF family CJ306_08665 PF01706 FliG C-terminal domain CJ306_08665 PF14842 FliG N-terminal domain CJ306_08665 PF14841 FliG middle domain CJ306_08675 PF18269 T3SS EscN ATPase C-terminal domain CJ306_08675 PF02874 ATP synthase alpha/beta family, beta-barrel domain CJ306_08675 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CJ306_08695 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CJ306_08695 PF00460 Flagella basal body rod protein CJ306_08695 PF07559 Flagellar basal body protein FlaE CJ306_08710 PF01584 CheW-like domain CJ306_08710 PF00072 Response regulator receiver domain CJ306_08715 PF12181 DNA binding domain of the motility gene repressor (MogR) CJ306_08720 PF00700 Bacterial flagellin C-terminal helical region CJ306_08720 PF00669 Bacterial flagellin N-terminal helical region CJ306_08725 PF00700 Bacterial flagellin C-terminal helical region CJ306_08725 PF00669 Bacterial flagellin N-terminal helical region CJ306_08730 PF01464 Transglycosylase SLT domain CJ306_08740 PF02154 Flagellar motor switch protein FliM CJ306_08740 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CJ306_08745 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CJ306_08745 PF04509 CheC-like family CJ306_08755 PF00813 FliP family CJ306_08760 PF01313 Bacterial export proteins, family 3 CJ306_08770 PF01312 FlhB HrpN YscU SpaS Family CJ306_08775 PF00771 FHIPEP family CJ306_08780 PF00448 SRP54-type protein, GTPase domain CJ306_08785 PF00460 Flagella basal body rod protein CJ306_08785 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CJ306_08790 PF01411 tRNA synthetases class II (A) CJ306_08790 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CJ306_08790 PF02272 DHHA1 domain CJ306_08825 PF03992 Antibiotic biosynthesis monooxygenase CJ306_08830 PF08141 Small acid-soluble spore protein H family CJ306_08855 PF00005 ABC transporter CJ306_08855 PF08402 TOBE domain CJ306_08865 PF00528 Binding-protein-dependent transport system inner membrane component CJ306_08870 PF12706 Beta-lactamase superfamily domain CJ306_08870 PF00753 Metallo-beta-lactamase superfamily CJ306_08880 PF10787 Uncharacterised protein from bacillus cereus group CJ306_08900 PF00300 Histidine phosphatase superfamily (branch 1) CJ306_08910 PF00561 alpha/beta hydrolase fold CJ306_08920 PF01047 MarR family CJ306_08930 PF13537 Glutamine amidotransferase domain CJ306_08930 PF00733 Asparagine synthase CJ306_08950 PF16916 Dimerisation domain of Zinc Transporter CJ306_08950 PF01545 Cation efflux family CJ306_08960 PF00392 Bacterial regulatory proteins, gntR family CJ306_08960 PF07729 FCD domain CJ306_08965 PF00892 EamA-like transporter family CJ306_08975 PF02492 CobW/HypB/UreG, nucleotide-binding domain CJ306_08975 PF07683 Cobalamin synthesis protein cobW C-terminal domain CJ306_08980 PF03773 Predicted permease CJ306_08995 PF03553 Na+/H+ antiporter family CJ306_09000 PF13411 MerR HTH family regulatory protein CJ306_09010 PF00206 Lyase CJ306_09010 PF10415 Fumarase C C-terminus CJ306_09025 PF01554 MatE CJ306_09030 PF03575 Peptidase family S51 CJ306_09050 PF02683 Cytochrome C biogenesis protein transmembrane region CJ306_09055 PF00578 AhpC/TSA family CJ306_09065 PF18801 response regulator aspartate phosphatase H, N terminal CJ306_09080 PF00291 Pyridoxal-phosphate dependent enzyme CJ306_09085 PF04286 Protein of unknown function (DUF445) CJ306_09115 PF00196 Bacterial regulatory proteins, luxR family CJ306_09115 PF00072 Response regulator receiver domain CJ306_09120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJ306_09120 PF13492 GAF domain CJ306_09120 PF13185 GAF domain CJ306_09120 PF07730 Histidine kinase CJ306_09125 PF00005 ABC transporter CJ306_09140 PF13091 PLD-like domain CJ306_09145 PF00696 Amino acid kinase family CJ306_09165 PF00375 Sodium:dicarboxylate symporter family CJ306_09170 PF10415 Fumarase C C-terminus CJ306_09170 PF00206 Lyase CJ306_09175 PF00390 Malic enzyme, N-terminal domain CJ306_09175 PF03949 Malic enzyme, NAD binding domain CJ306_09180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJ306_09185 PF08664 YcbB domain CJ306_09185 PF00072 Response regulator receiver domain CJ306_09190 PF00176 SNF2 family N-terminal domain CJ306_09190 PF00271 Helicase conserved C-terminal domain CJ306_09190 PF04434 SWIM zinc finger CJ306_09205 PF03590 Aspartate-ammonia ligase CJ306_09215 PF00696 Amino acid kinase family CJ306_09215 PF13840 ACT domain CJ306_09230 PF13761 Domain of unknown function (DUF4166) CJ306_09235 PF14158 YndJ-like protein CJ306_09240 PF09297 NADH pyrophosphatase zinc ribbon domain CJ306_09240 PF00293 NUDIX domain CJ306_09245 PF07690 Major Facilitator Superfamily CJ306_09255 PF03976 Polyphosphate kinase 2 (PPK2) CJ306_09260 PF03551 Transcriptional regulator PadR-like family CJ306_09260 PF10400 Virulence activator alpha C-term CJ306_09265 PF07690 Major Facilitator Superfamily CJ306_09270 PF07690 Major Facilitator Superfamily CJ306_09275 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CJ306_09275 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CJ306_09280 PF01926 50S ribosome-binding GTPase CJ306_09280 PF13167 GTP-binding GTPase N-terminal CJ306_09280 PF16360 GTP-binding GTPase Middle Region CJ306_09285 PF07690 Major Facilitator Superfamily CJ306_09290 PF00291 Pyridoxal-phosphate dependent enzyme CJ306_09310 PF00209 Sodium:neurotransmitter symporter family CJ306_09315 PF01522 Polysaccharide deacetylase CJ306_09315 PF00457 Glycosyl hydrolases family 11 CJ306_09315 PF03422 Carbohydrate binding module (family 6) CJ306_09325 PF04239 Protein of unknown function (DUF421) CJ306_09350 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CJ306_09350 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CJ306_09370 PF01625 Peptide methionine sulfoxide reductase CJ306_09380 PF01063 Amino-transferase class IV CJ306_09385 PF00205 Thiamine pyrophosphate enzyme, central domain CJ306_09385 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CJ306_09385 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CJ306_09395 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain CJ306_09395 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CJ306_09400 PF00920 Dehydratase family CJ306_09405 PF00585 C-terminal regulatory domain of Threonine dehydratase CJ306_09405 PF00291 Pyridoxal-phosphate dependent enzyme CJ306_09415 PF09587 Bacterial capsule synthesis protein PGA_cap CJ306_09430 PF07690 Major Facilitator Superfamily CJ306_09435 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CJ306_09445 PF00072 Response regulator receiver domain CJ306_09445 PF04397 LytTr DNA-binding domain CJ306_09450 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain CJ306_09450 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain CJ306_09465 PF01979 Amidohydrolase family CJ306_09470 PF07690 Major Facilitator Superfamily CJ306_09475 PF00440 Bacterial regulatory proteins, tetR family CJ306_09495 PF18801 response regulator aspartate phosphatase H, N terminal CJ306_09505 PF01494 FAD binding domain CJ306_09510 PF01494 FAD binding domain CJ306_09515 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CJ306_09520 PF13302 Acetyltransferase (GNAT) domain CJ306_09525 PF00072 Response regulator receiver domain CJ306_09525 PF00486 Transcriptional regulatory protein, C terminal CJ306_09530 PF00512 His Kinase A (phospho-acceptor) domain CJ306_09530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJ306_09540 PF01566 Natural resistance-associated macrophage protein CJ306_09560 PF08546 Ketopantoate reductase PanE/ApbA C terminal CJ306_09560 PF02558 Ketopantoate reductase PanE/ApbA CJ306_09565 PF13520 Amino acid permease CJ306_09580 PF05791 Bacillus haemolytic enterotoxin (HBL) CJ306_09600 PF02073 Thermophilic metalloprotease (M29) CJ306_09615 PF00583 Acetyltransferase (GNAT) family CJ306_09625 PF01906 Putative heavy-metal-binding CJ306_09635 PF00440 Bacterial regulatory proteins, tetR family CJ306_09640 PF04198 Putative sugar-binding domain CJ306_09645 PF01791 DeoC/LacD family aldolase CJ306_09650 PF07662 Na+ dependent nucleoside transporter C-terminus CJ306_09650 PF01773 Na+ dependent nucleoside transporter N-terminus CJ306_09655 PF02885 Glycosyl transferase family, helical bundle domain CJ306_09655 PF00591 Glycosyl transferase family, a/b domain CJ306_09655 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain CJ306_09660 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CJ306_09665 PF07301 Protein of unknown function (DUF1453) CJ306_09670 PF05979 Bacterial protein of unknown function (DUF896) CJ306_09675 PF05195 Aminopeptidase P, N-terminal domain CJ306_09675 PF00557 Metallopeptidase family M24 CJ306_09685 PF07732 Multicopper oxidase CJ306_09685 PF00394 Multicopper oxidase CJ306_09685 PF07731 Multicopper oxidase CJ306_09710 PF02525 Flavodoxin-like fold CJ306_09715 PF05525 Branched-chain amino acid transport protein CJ306_09725 PF12727 PBP superfamily domain CJ306_09725 PF12728 Helix-turn-helix domain CJ306_09730 PF00860 Permease family CJ306_09735 PF00067 Cytochrome P450 CJ306_09745 PF05163 DinB family CJ306_09750 PF01596 O-methyltransferase CJ306_09755 PF01810 LysE type translocator CJ306_09760 PF08892 YqcI/YcgG family CJ306_09785 PF01259 SAICAR synthetase CJ306_09795 PF01634 ATP phosphoribosyltransferase CJ306_09820 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CJ306_09825 PF05425 Copper resistance protein D CJ306_09825 PF13115 YtkA-like CJ306_09825 PF04234 CopC domain CJ306_09830 PF07987 Domain of unkown function (DUF1775) CJ306_09835 PF00892 EamA-like transporter family CJ306_09840 PF03466 LysR substrate binding domain CJ306_09840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJ306_09845 PF02082 Transcriptional regulator CJ306_09850 PF01323 DSBA-like thioredoxin domain CJ306_09855 PF00881 Nitroreductase family CJ306_09870 PF01594 AI-2E family transporter CJ306_09875 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CJ306_09875 PF00056 lactate/malate dehydrogenase, NAD binding domain CJ306_09880 PF01593 Flavin containing amine oxidoreductase CJ306_09890 PF07683 Cobalamin synthesis protein cobW C-terminal domain CJ306_09890 PF02492 CobW/HypB/UreG, nucleotide-binding domain CJ306_09900 PF00005 ABC transporter CJ306_09900 PF12399 Branched-chain amino acid ATP-binding cassette transporter CJ306_09905 PF00005 ABC transporter CJ306_09910 PF02653 Branched-chain amino acid transport system / permease component CJ306_09920 PF03466 LysR substrate binding domain CJ306_09920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJ306_09945 PF01047 MarR family CJ306_09955 PF01654 Cytochrome bd terminal oxidase subunit I CJ306_09960 PF02322 Cytochrome bd terminal oxidase subunit II CJ306_09965 PF00005 ABC transporter CJ306_09965 PF00664 ABC transporter transmembrane region CJ306_09970 PF00664 ABC transporter transmembrane region CJ306_09970 PF00005 ABC transporter CJ306_09985 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CJ306_09990 PF00132 Bacterial transferase hexapeptide (six repeats) CJ306_10015 PF02016 LD-carboxypeptidase N-terminal domain CJ306_10015 PF17676 LD-carboxypeptidase C-terminal domain CJ306_10020 PF00768 D-alanyl-D-alanine carboxypeptidase CJ306_10020 PF07943 Penicillin-binding protein 5, C-terminal domain CJ306_10035 PF01476 LysM domain CJ306_10035 PF00877 NlpC/P60 family CJ306_10045 PF00664 ABC transporter transmembrane region CJ306_10045 PF00005 ABC transporter CJ306_10050 PF00486 Transcriptional regulatory protein, C terminal CJ306_10050 PF00072 Response regulator receiver domain CJ306_10055 PF00989 PAS fold CJ306_10055 PF00512 His Kinase A (phospho-acceptor) domain CJ306_10055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJ306_10055 PF16736 Single Cache-like CJ306_10065 PF00106 short chain dehydrogenase CJ306_10070 PF04439 Streptomycin adenylyltransferase CJ306_10075 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain CJ306_10075 PF01522 Polysaccharide deacetylase CJ306_10095 PF00742 Homoserine dehydrogenase CJ306_10095 PF03447 Homoserine dehydrogenase, NAD binding domain CJ306_10095 PF01842 ACT domain CJ306_10100 PF00291 Pyridoxal-phosphate dependent enzyme CJ306_10105 PF08544 GHMP kinases C terminal CJ306_10105 PF00288 GHMP kinases N terminal domain CJ306_10120 PF03816 Cell envelope-related transcriptional attenuator domain CJ306_10130 PF00072 Response regulator receiver domain CJ306_10130 PF00486 Transcriptional regulatory protein, C terminal CJ306_10135 PF00989 PAS fold CJ306_10135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJ306_10135 PF16736 Single Cache-like CJ306_10135 PF00512 His Kinase A (phospho-acceptor) domain CJ306_10140 PF01522 Polysaccharide deacetylase CJ306_10150 PF02308 MgtC family CJ306_10155 PF00583 Acetyltransferase (GNAT) family CJ306_10160 PF06276 Ferric iron reductase FhuF-like transporter CJ306_10160 PF04183 IucA / IucC family CJ306_10165 PF04183 IucA / IucC family CJ306_10165 PF06276 Ferric iron reductase FhuF-like transporter CJ306_10170 PF13193 AMP-binding enzyme C-terminal domain CJ306_10170 PF00501 AMP-binding enzyme CJ306_10185 PF01261 Xylose isomerase-like TIM barrel CJ306_10190 PF00269 Small, acid-soluble spore proteins, alpha/beta type CJ306_10195 PF07690 Major Facilitator Superfamily CJ306_10200 PF01810 LysE type translocator CJ306_10205 PF00155 Aminotransferase class I and II CJ306_10205 PF00392 Bacterial regulatory proteins, gntR family CJ306_10215 PF01734 Patatin-like phospholipase CJ306_10240 PF13344 Haloacid dehalogenase-like hydrolase CJ306_10240 PF00293 NUDIX domain CJ306_10245 PF02540 NAD synthase CJ306_10250 PF02687 FtsX-like permease family CJ306_10255 PF18277 AbrB C-terminal domain CJ306_10255 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin CJ306_10260 PF00082 Subtilase family CJ306_10265 PF01022 Bacterial regulatory protein, arsR family CJ306_10270 PF00248 Aldo/keto reductase family CJ306_10275 PF07690 Major Facilitator Superfamily CJ306_10285 PF05656 Protein of unknown function (DUF805) CJ306_10305 PF03193 RsgA GTPase CJ306_10310 PF02743 Cache domain CJ306_10310 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CJ306_10310 PF00672 HAMP domain CJ306_10335 PF00210 Ferritin-like domain CJ306_10350 PF00296 Luciferase-like monooxygenase CJ306_10360 PF01593 Flavin containing amine oxidoreductase CJ306_10365 PF13302 Acetyltransferase (GNAT) domain CJ306_10370 PF00248 Aldo/keto reductase family CJ306_10380 PF02492 CobW/HypB/UreG, nucleotide-binding domain CJ306_10380 PF07683 Cobalamin synthesis protein cobW C-terminal domain CJ306_10385 PF00583 Acetyltransferase (GNAT) family CJ306_10390 PF01297 Zinc-uptake complex component A periplasmic CJ306_10400 PF13460 NAD(P)H-binding CJ306_10405 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CJ306_10410 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CJ306_10410 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CJ306_10420 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CJ306_10425 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CJ306_10435 PF00300 Histidine phosphatase superfamily (branch 1) CJ306_10445 PF08757 CotH kinase protein CJ306_10450 PF00293 NUDIX domain CJ306_10455 PF09335 SNARE associated Golgi protein CJ306_10460 PF14667 Polysaccharide biosynthesis C-terminal domain CJ306_10460 PF01943 Polysaccharide biosynthesis protein CJ306_10470 PF03773 Predicted permease CJ306_10475 PF09323 Domain of unknown function (DUF1980) CJ306_10480 PF03061 Thioesterase superfamily CJ306_10490 PF13396 Phospholipase_D-nuclease N-terminal CJ306_10490 PF13091 PLD-like domain CJ306_10505 PF13460 NAD(P)H-binding CJ306_10510 PF04306 Protein of unknown function (DUF456) CJ306_10515 PF00571 CBS domain CJ306_10515 PF03471 Transporter associated domain CJ306_10515 PF01595 Cyclin M transmembrane N-terminal domain CJ306_10530 PF05525 Branched-chain amino acid transport protein CJ306_10535 PF01588 Putative tRNA binding domain CJ306_10555 PF07454 Stage II sporulation protein P (SpoIIP) CJ306_10565 PF02557 D-alanyl-D-alanine carboxypeptidase CJ306_10575 PF01425 Amidase CJ306_10580 PF07690 Major Facilitator Superfamily CJ306_10590 PF01145 SPFH domain / Band 7 family CJ306_10625 PF01168 Alanine racemase, N-terminal domain CJ306_10625 PF00842 Alanine racemase, C-terminal domain CJ306_10645 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase CJ306_10650 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CJ306_10650 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CJ306_10655 PF00155 Aminotransferase class I and II CJ306_10655 PF00392 Bacterial regulatory proteins, gntR family CJ306_10685 PF00583 Acetyltransferase (GNAT) family CJ306_10700 PF06013 Proteins of 100 residues with WXG CJ306_10715 PF08817 WXG100 protein secretion system (Wss), protein YukD CJ306_10720 PF10140 WXG100 protein secretion system (Wss), protein YukC CJ306_10725 PF01580 FtsK/SpoIIIE family CJ306_10725 PF12538 DNA transporter CJ306_10825 PF09579 Sporulation protein YtfJ (Spore_YtfJ) CJ306_10850 PF01209 ubiE/COQ5 methyltransferase family CJ306_10855 PF01268 Formate--tetrahydrofolate ligase CJ306_10865 PF00270 DEAD/DEAH box helicase CJ306_10865 PF00271 Helicase conserved C-terminal domain CJ306_10870 PF01261 Xylose isomerase-like TIM barrel CJ306_10875 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CJ306_10885 PF08240 Alcohol dehydrogenase GroES-like domain CJ306_10885 PF00107 Zinc-binding dehydrogenase CJ306_10890 PF08281 Sigma-70, region 4 CJ306_10890 PF04542 Sigma-70 region 2 CJ306_10905 PF01613 Flavin reductase like domain CJ306_10905 PF00258 Flavodoxin CJ306_10915 PF00255 Glutathione peroxidase CJ306_10920 PF01841 Transglutaminase-like superfamily CJ306_10920 PF13559 Domain of unknown function (DUF4129) CJ306_10920 PF11992 Domain of unknown function (DUF3488) CJ306_10925 PF01882 Protein of unknown function DUF58 CJ306_10930 PF17863 AAA lid domain CJ306_10930 PF07726 ATPase family associated with various cellular activities (AAA) CJ306_10935 PF00384 Molybdopterin oxidoreductase CJ306_10935 PF01568 Molydopterin dinucleotide binding domain CJ306_10935 PF14710 Respiratory nitrate reductase alpha N-terminal CJ306_10940 PF13247 4Fe-4S dicluster domain CJ306_10940 PF14711 Respiratory nitrate reductase beta C-terminal CJ306_10945 PF02613 Nitrate reductase delta subunit CJ306_10950 PF02665 Nitrate reductase gamma subunit CJ306_10955 PF00325 Bacterial regulatory proteins, crp family CJ306_10955 PF00027 Cyclic nucleotide-binding domain CJ306_10960 PF04055 Radical SAM superfamily CJ306_10960 PF06463 Molybdenum Cofactor Synthesis C CJ306_10965 PF00899 ThiF family CJ306_10970 PF00994 Probable molybdopterin binding domain CJ306_10970 PF03454 MoeA C-terminal region (domain IV) CJ306_10970 PF03453 MoeA N-terminal region (domain I and II) CJ306_10975 PF02391 MoaE protein CJ306_10985 PF07690 Major Facilitator Superfamily CJ306_11010 PF01903 CbiX CJ306_11015 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CJ306_11020 PF00355 Rieske [2Fe-2S] domain CJ306_11025 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CJ306_11025 PF18267 Rubredoxin NAD+ reductase C-terminal domain CJ306_11025 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJ306_11025 PF04324 BFD-like [2Fe-2S] binding domain CJ306_11025 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CJ306_11030 PF01814 Hemerythrin HHE cation binding domain CJ306_11030 PF04405 Domain of Unknown function (DUF542) CJ306_11065 PF04232 Stage V sporulation protein S (SpoVS) CJ306_11090 PF17874 MalT-like TPR region CJ306_11090 PF18801 response regulator aspartate phosphatase H, N terminal CJ306_11100 PF14659 Phage integrase, N-terminal SAM-like domain CJ306_11100 PF00589 Phage integrase family CJ306_11105 PF06114 IrrE N-terminal-like domain CJ306_11115 PF01119 DNA mismatch repair protein, C-terminal domain CJ306_11115 PF08676 MutL C terminal dimerisation domain CJ306_11130 PF01381 Helix-turn-helix CJ306_11215 PF00589 Phage integrase family CJ306_11245 PF02796 Helix-turn-helix domain of resolvase CJ306_11245 PF00239 Resolvase, N terminal domain CJ306_11255 PF10668 Phage terminase small subunit CJ306_11260 PF17288 Terminase RNAseH like domain CJ306_11260 PF04466 Phage terminase large subunit CJ306_11275 PF14550 Putative phage serine protease XkdF CJ306_11395 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CJ306_11395 PF13457 GW (Gly-Tryp) dipeptide domain CJ306_11410 PF18801 response regulator aspartate phosphatase H, N terminal CJ306_11425 PF01966 HD domain CJ306_11430 PF00005 ABC transporter CJ306_11430 PF12848 ABC transporter CJ306_11430 PF16326 ABC transporter C-terminal domain CJ306_11450 PF01348 Type II intron maturase CJ306_11450 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CJ306_11460 PF13769 Virulence factor CJ306_11460 PF08712 Scaffold protein Nfu/NifU N terminal CJ306_11470 PF06491 Disulphide isomerase CJ306_11475 PF04445 Putative SAM-dependent methyltransferase CJ306_11480 PF05746 DALR anticodon binding domain CJ306_11480 PF03485 Arginyl tRNA synthetase N terminal domain CJ306_11480 PF00750 tRNA synthetases class I (R) CJ306_11505 PF08264 Anticodon-binding domain of tRNA CJ306_11505 PF00133 tRNA synthetases class I (I, L, M and V) CJ306_11525 PF01336 OB-fold nucleic acid binding domain CJ306_11525 PF00152 tRNA synthetases class II (D, K and N) CJ306_11530 PF00209 Sodium:neurotransmitter symporter family CJ306_11545 PF10997 Alternate to MurJ CJ306_11550 PF13419 Haloacid dehalogenase-like hydrolase CJ306_11560 PF00465 Iron-containing alcohol dehydrogenase CJ306_11565 PF01177 Asp/Glu/Hydantoin racemase CJ306_11570 PF01980 tRNA-methyltransferase O CJ306_11575 PF00583 Acetyltransferase (GNAT) family CJ306_11580 PF11188 Protein of unknown function (DUF2975) CJ306_11585 PF13443 Cro/C1-type HTH DNA-binding domain CJ306_11590 PF08645 Polynucleotide kinase 3 phosphatase CJ306_11600 PF00005 ABC transporter CJ306_11605 PF05975 Bacterial ABC transporter protein EcsB CJ306_11610 PF14005 YpjP-like protein CJ306_11615 PF13419 Haloacid dehalogenase-like hydrolase CJ306_11630 PF07930 D-aminopeptidase, domain B CJ306_11630 PF00144 Beta-lactamase CJ306_11635 PF00303 Thymidylate synthase CJ306_11640 PF00186 Dihydrofolate reductase CJ306_11645 PF00905 Penicillin binding protein transpeptidase domain CJ306_11645 PF05223 NTF2-like N-terminal transpeptidase domain CJ306_11645 PF03717 Penicillin-binding Protein dimerisation domain CJ306_11650 PF02525 Flavodoxin-like fold CJ306_11655 PF01553 Acyltransferase CJ306_11660 PF03006 Haemolysin-III related CJ306_11665 PF02416 mttA/Hcf106 family CJ306_11670 PF00902 Sec-independent protein translocase protein (TatC) CJ306_11680 PF02645 Uncharacterised protein, DegV family COG1307 CJ306_11690 PF02630 SCO1/SenC CJ306_11695 PF00011 Hsp20/alpha crystallin family CJ306_11700 PF00733 Asparagine synthase CJ306_11700 PF13537 Glutamine amidotransferase domain CJ306_11715 PF05036 Sporulation related domain CJ306_11715 PF01520 N-acetylmuramoyl-L-alanine amidase CJ306_11720 PF01497 Periplasmic binding protein CJ306_11725 PF01063 Amino-transferase class IV CJ306_11730 PF00881 Nitroreductase family CJ306_11745 PF00857 Isochorismatase family CJ306_11755 PF00011 Hsp20/alpha crystallin family CJ306_11760 PF00924 Mechanosensitive ion channel CJ306_11765 PF07730 Histidine kinase CJ306_11765 PF13185 GAF domain CJ306_11770 PF00196 Bacterial regulatory proteins, luxR family CJ306_11770 PF00072 Response regulator receiver domain CJ306_11775 PF01380 SIS domain CJ306_11775 PF01418 Helix-turn-helix domain, rpiR family CJ306_11780 PF02567 Phenazine biosynthesis-like protein CJ306_11785 PF00107 Zinc-binding dehydrogenase CJ306_11785 PF08240 Alcohol dehydrogenase GroES-like domain CJ306_11800 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CJ306_11800 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CJ306_11805 PF02447 GntP family permease CJ306_11810 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain CJ306_11810 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CJ306_11815 PF10924 Protein of unknown function (DUF2711) CJ306_11830 PF03358 NADPH-dependent FMN reductase CJ306_11845 PF00571 CBS domain CJ306_11845 PF00005 ABC transporter CJ306_11850 PF00528 Binding-protein-dependent transport system inner membrane component CJ306_11855 PF13520 Amino acid permease CJ306_11885 PF01595 Cyclin M transmembrane N-terminal domain CJ306_11885 PF03471 Transporter associated domain CJ306_11885 PF00571 CBS domain CJ306_11890 PF00171 Aldehyde dehydrogenase family CJ306_11895 PF07997 Protein of unknown function (DUF1694) CJ306_11900 PF09385 Histidine kinase N terminal CJ306_11915 PF00202 Aminotransferase class-III CJ306_11920 PF01144 Coenzyme A transferase CJ306_11925 PF01144 Coenzyme A transferase CJ306_11930 PF01546 Peptidase family M20/M25/M40 CJ306_11930 PF07687 Peptidase dimerisation domain CJ306_11935 PF00583 Acetyltransferase (GNAT) family CJ306_11940 PF13426 PAS domain CJ306_11940 PF02954 Bacterial regulatory protein, Fis family CJ306_11940 PF00158 Sigma-54 interaction domain CJ306_11945 PF12544 Lysine-2,3-aminomutase CJ306_11950 PF14122 YokU-like protein, putative antitoxin CJ306_11955 PF06855 YozE SAM-like fold CJ306_11970 PF14162 YozD-like protein CJ306_11980 PF00069 Protein kinase domain CJ306_11980 PF08239 Bacterial SH3 domain CJ306_11990 PF01569 PAP2 superfamily CJ306_11995 PF16916 Dimerisation domain of Zinc Transporter CJ306_11995 PF01545 Cation efflux family CJ306_12000 PF00085 Thioredoxin CJ306_12085 PF10676 Spore germination protein gerPA/gerPF CJ306_12100 PF00106 short chain dehydrogenase CJ306_12120 PF00905 Penicillin binding protein transpeptidase domain CJ306_12120 PF00912 Transglycosylase CJ306_12130 PF07690 Major Facilitator Superfamily CJ306_12135 PF01521 Iron-sulphur cluster biosynthesis CJ306_12140 PF00285 Citrate synthase, C-terminal domain CJ306_12145 PF03972 MmgE/PrpD family CJ306_12155 PF02770 Acyl-CoA dehydrogenase, middle domain CJ306_12155 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CJ306_12155 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CJ306_12160 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CJ306_12160 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CJ306_12165 PF00171 Aldehyde dehydrogenase family CJ306_12170 PF01810 LysE type translocator CJ306_12175 PF00378 Enoyl-CoA hydratase/isomerase CJ306_12190 PF12320 Type 5 capsule protein repressor C-terminal domain CJ306_12190 PF00149 Calcineurin-like phosphoesterase CJ306_12195 PF13476 AAA domain CJ306_12205 PF01022 Bacterial regulatory protein, arsR family CJ306_12225 PF07690 Major Facilitator Superfamily CJ306_12235 PF00106 short chain dehydrogenase CJ306_12240 PF00425 chorismate binding enzyme CJ306_12245 PF13193 AMP-binding enzyme C-terminal domain CJ306_12245 PF00501 AMP-binding enzyme CJ306_12250 PF00550 Phosphopantetheine attachment site CJ306_12250 PF00857 Isochorismatase family CJ306_12255 PF00975 Thioesterase domain CJ306_12255 PF00550 Phosphopantetheine attachment site CJ306_12255 PF00668 Condensation domain CJ306_12255 PF13193 AMP-binding enzyme C-terminal domain CJ306_12255 PF00501 AMP-binding enzyme CJ306_12260 PF03621 MbtH-like protein CJ306_12265 PF07690 Major Facilitator Superfamily CJ306_12280 PF00216 Bacterial DNA-binding protein CJ306_12290 PF05163 DinB family CJ306_12295 PF00082 Subtilase family CJ306_12300 PF01235 Sodium:alanine symporter family CJ306_12320 PF01479 S4 domain CJ306_12320 PF00849 RNA pseudouridylate synthase CJ306_12325 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CJ306_12325 PF03129 Anticodon binding domain CJ306_12325 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CJ306_12325 PF02824 TGS domain CJ306_12330 PF00005 ABC transporter CJ306_12350 PF00753 Metallo-beta-lactamase superfamily CJ306_12380 PF00027 Cyclic nucleotide-binding domain CJ306_12395 PF00753 Metallo-beta-lactamase superfamily CJ306_12395 PF16123 Hydroxyacylglutathione hydrolase C-terminus CJ306_12405 PF03176 MMPL family CJ306_12425 PF00302 Chloramphenicol acetyltransferase CJ306_12440 PF00583 Acetyltransferase (GNAT) family CJ306_12475 PF13302 Acetyltransferase (GNAT) domain CJ306_12485 PF00313 'Cold-shock' DNA-binding domain CJ306_12505 PF03466 LysR substrate binding domain CJ306_12505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJ306_12510 PF01118 Semialdehyde dehydrogenase, NAD binding domain CJ306_12510 PF02774 Semialdehyde dehydrogenase, dimerisation domain CJ306_12530 PF03466 LysR substrate binding domain CJ306_12530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJ306_12535 PF03473 MOSC domain CJ306_12535 PF03475 3-alpha domain CJ306_12550 PF00005 ABC transporter CJ306_12550 PF00664 ABC transporter transmembrane region CJ306_12555 PF00664 ABC transporter transmembrane region CJ306_12555 PF00005 ABC transporter CJ306_12585 PF00589 Phage integrase family CJ306_12585 PF14659 Phage integrase, N-terminal SAM-like domain CJ306_12590 PF01381 Helix-turn-helix CJ306_12605 PF01381 Helix-turn-helix CJ306_12615 PF03374 Phage antirepressor protein KilAC domain CJ306_12615 PF09669 Phage regulatory protein Rha (Phage_pRha) CJ306_12640 PF01695 IstB-like ATP binding protein CJ306_12650 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin CJ306_12650 PF18277 AbrB C-terminal domain CJ306_12715 PF00589 Phage integrase family CJ306_12820 PF13942 YfhG lipoprotein CJ306_12845 PF05105 Bacteriophage holin family CJ306_12850 PF01471 Putative peptidoglycan binding domain CJ306_12850 PF01476 LysM domain CJ306_12850 PF01510 N-acetylmuramoyl-L-alanine amidase CJ306_12865 PF11798 IMS family HHH motif CJ306_12865 PF11799 impB/mucB/samB family C-terminal domain CJ306_12865 PF00817 impB/mucB/samB family CJ306_12915 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJ306_12915 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CJ306_12920 PF08281 Sigma-70, region 4 CJ306_12920 PF12680 SnoaL-like domain CJ306_12920 PF04542 Sigma-70 region 2 CJ306_12955 PF02638 Glycosyl hydrolase-like 10 CJ306_12965 PF02378 Phosphotransferase system, EIIC CJ306_12975 PF03702 Anhydro-N-acetylmuramic acid kinase CJ306_12980 PF01869 BadF/BadG/BcrA/BcrD ATPase family CJ306_12985 PF02660 Glycerol-3-phosphate acyltransferase CJ306_12990 PF00266 Aminotransferase class-V CJ306_12995 PF00291 Pyridoxal-phosphate dependent enzyme CJ306_13000 PF01047 MarR family CJ306_13005 PF07690 Major Facilitator Superfamily CJ306_13015 PF00753 Metallo-beta-lactamase superfamily CJ306_13025 PF00270 DEAD/DEAH box helicase CJ306_13025 PF00271 Helicase conserved C-terminal domain CJ306_13045 PF17932 Tetracyclin repressor-like, C-terminal domain CJ306_13045 PF00440 Bacterial regulatory proteins, tetR family CJ306_13155 PF03848 Tellurite resistance protein TehB CJ306_13155 PF09313 Domain of unknown function (DUF1971) CJ306_13165 PF08241 Methyltransferase domain CJ306_13170 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CJ306_13170 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CJ306_13170 PF00205 Thiamine pyrophosphate enzyme, central domain CJ306_13175 PF01047 MarR family CJ306_13180 PF00300 Histidine phosphatase superfamily (branch 1) CJ306_13190 PF14171 Toxin SpoIISA, type II toxin-antitoxin system CJ306_13210 PF01546 Peptidase family M20/M25/M40 CJ306_13210 PF07687 Peptidase dimerisation domain CJ306_13225 PF04371 Porphyromonas-type peptidyl-arginine deiminase CJ306_13235 PF00072 Response regulator receiver domain CJ306_13235 PF00196 Bacterial regulatory proteins, luxR family CJ306_13245 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin CJ306_13245 PF18277 AbrB C-terminal domain CJ306_13255 PF01925 Sulfite exporter TauE/SafE CJ306_13260 PF00132 Bacterial transferase hexapeptide (six repeats) CJ306_13265 PF07943 Penicillin-binding protein 5, C-terminal domain CJ306_13265 PF00768 D-alanyl-D-alanine carboxypeptidase CJ306_13280 PF07690 Major Facilitator Superfamily CJ306_13285 PF00501 AMP-binding enzyme CJ306_13285 PF00668 Condensation domain CJ306_13285 PF00550 Phosphopantetheine attachment site CJ306_13285 PF13193 AMP-binding enzyme C-terminal domain CJ306_13290 PF00501 AMP-binding enzyme CJ306_13290 PF13193 AMP-binding enzyme C-terminal domain CJ306_13290 PF00668 Condensation domain CJ306_13290 PF00550 Phosphopantetheine attachment site CJ306_13290 PF07993 Male sterility protein CJ306_13295 PF00668 Condensation domain CJ306_13295 PF00550 Phosphopantetheine attachment site CJ306_13295 PF00501 AMP-binding enzyme CJ306_13295 PF13193 AMP-binding enzyme C-terminal domain CJ306_13300 PF01648 4'-phosphopantetheinyl transferase superfamily CJ306_13305 PF00975 Thioesterase domain CJ306_13315 PF05139 Erythromycin esterase CJ306_13330 PF13302 Acetyltransferase (GNAT) domain CJ306_13375 PF00027 Cyclic nucleotide-binding domain CJ306_13375 PF01734 Patatin-like phospholipase CJ306_13395 PF00440 Bacterial regulatory proteins, tetR family CJ306_13395 PF18665 Tetracyclin repressor-like, C-terminal domain CJ306_13420 PF02687 FtsX-like permease family CJ306_13425 PF00005 ABC transporter CJ306_13430 PF00144 Beta-lactamase CJ306_13435 PF00144 Beta-lactamase CJ306_13440 PF00144 Beta-lactamase CJ306_13455 PF00072 Response regulator receiver domain CJ306_13455 PF00196 Bacterial regulatory proteins, luxR family CJ306_13460 PF00144 Beta-lactamase CJ306_13460 PF11954 Domain of unknown function (DUF3471) CJ306_13465 PF00905 Penicillin binding protein transpeptidase domain CJ306_13465 PF05223 NTF2-like N-terminal transpeptidase domain CJ306_13465 PF03717 Penicillin-binding Protein dimerisation domain CJ306_13470 PF08281 Sigma-70, region 4 CJ306_13470 PF04542 Sigma-70 region 2 CJ306_13480 PF03717 Penicillin-binding Protein dimerisation domain CJ306_13480 PF00905 Penicillin binding protein transpeptidase domain CJ306_13495 PF00149 Calcineurin-like phosphoesterase CJ306_13505 PF00005 ABC transporter CJ306_13515 PF08359 YsiA-like protein, C-terminal region CJ306_13515 PF00440 Bacterial regulatory proteins, tetR family CJ306_13530 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CJ306_13530 PF02770 Acyl-CoA dehydrogenase, middle domain CJ306_13530 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CJ306_13535 PF00289 Biotin carboxylase, N-terminal domain CJ306_13535 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CJ306_13535 PF02785 Biotin carboxylase C-terminal domain CJ306_13540 PF00364 Biotin-requiring enzyme CJ306_13545 PF00682 HMGL-like CJ306_13550 PF00378 Enoyl-CoA hydratase/isomerase CJ306_13555 PF01039 Carboxyl transferase domain CJ306_13560 PF16177 Acetyl-coenzyme A synthetase N-terminus CJ306_13560 PF00501 AMP-binding enzyme CJ306_13560 PF13193 AMP-binding enzyme C-terminal domain CJ306_13600 PF00768 D-alanyl-D-alanine carboxypeptidase CJ306_13600 PF07943 Penicillin-binding protein 5, C-terminal domain CJ306_13605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJ306_13605 PF00512 His Kinase A (phospho-acceptor) domain CJ306_13610 PF00486 Transcriptional regulatory protein, C terminal CJ306_13610 PF00072 Response regulator receiver domain CJ306_13615 PF01966 HD domain CJ306_13625 PF13021 Domain of unknown function (DUF3885) CJ306_13630 PF01048 Phosphorylase superfamily CJ306_13645 PF07504 Fungalysin/Thermolysin Propeptide Motif CJ306_13645 PF02868 Thermolysin metallopeptidase, alpha-helical domain CJ306_13645 PF01447 Thermolysin metallopeptidase, catalytic domain CJ306_13645 PF03413 Peptidase propeptide and YPEB domain CJ306_13650 PF17853 GGDEF-like domain CJ306_13650 PF12833 Helix-turn-helix domain CJ306_13680 PF17755 UvrA DNA-binding domain CJ306_13680 PF00005 ABC transporter CJ306_13680 PF17760 UvrA interaction domain CJ306_13685 PF09278 MerR, DNA binding CJ306_13685 PF00376 MerR family regulatory protein CJ306_13690 PF07690 Major Facilitator Superfamily CJ306_13700 PF01638 HxlR-like helix-turn-helix CJ306_13745 PF00392 Bacterial regulatory proteins, gntR family CJ306_13745 PF00155 Aminotransferase class I and II CJ306_13785 PF01921 tRNA synthetases class I (K) CJ306_13790 PF07486 Cell Wall Hydrolase CJ306_13800 PF00486 Transcriptional regulatory protein, C terminal CJ306_13800 PF00072 Response regulator receiver domain CJ306_13805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJ306_13835 PF00005 ABC transporter CJ306_13840 PF02687 FtsX-like permease family CJ306_13860 PF01842 ACT domain CJ306_13860 PF03447 Homoserine dehydrogenase, NAD binding domain CJ306_13860 PF00742 Homoserine dehydrogenase CJ306_13865 PF00155 Aminotransferase class I and II CJ306_13865 PF00392 Bacterial regulatory proteins, gntR family CJ306_13870 PF07478 D-ala D-ala ligase C-terminus CJ306_13870 PF01820 D-ala D-ala ligase N-terminus CJ306_13875 PF03070 TENA/THI-4/PQQC family CJ306_13905 PF00589 Phage integrase family CJ306_13905 PF14659 Phage integrase, N-terminal SAM-like domain CJ306_13945 PF18277 AbrB C-terminal domain CJ306_13945 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin CJ306_14015 PF10676 Spore germination protein gerPA/gerPF CJ306_14030 PF00589 Phage integrase family CJ306_14060 PF03354 Phage Terminase CJ306_14070 PF00574 Clp protease CJ306_14130 PF05105 Bacteriophage holin family CJ306_14135 PF12123 N-acetylmuramoyl-l-alanine amidase CJ306_14135 PF01510 N-acetylmuramoyl-L-alanine amidase CJ306_14180 PF00067 Cytochrome P450 CJ306_14195 PF00132 Bacterial transferase hexapeptide (six repeats) CJ306_14200 PF07561 Domain of Unknown Function (DUF1540) CJ306_14210 PF00067 Cytochrome P450 CJ306_14230 PF13188 PAS domain CJ306_14230 PF00512 His Kinase A (phospho-acceptor) domain CJ306_14230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJ306_14230 PF13426 PAS domain CJ306_14230 PF00989 PAS fold CJ306_14240 PF10502 Signal peptidase, peptidase S26 CJ306_14245 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase CJ306_14250 PF01177 Asp/Glu/Hydantoin racemase CJ306_14255 PF07155 ECF-type riboflavin transporter, S component CJ306_14260 PF00005 ABC transporter CJ306_14260 PF12558 ATP-binding cassette cobalt transporter CJ306_14275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJ306_14275 PF00512 His Kinase A (phospho-acceptor) domain CJ306_14280 PF00589 Phage integrase family CJ306_14280 PF14659 Phage integrase, N-terminal SAM-like domain CJ306_14330 PF13344 Haloacid dehalogenase-like hydrolase CJ306_14330 PF00293 NUDIX domain CJ306_14355 PF08240 Alcohol dehydrogenase GroES-like domain CJ306_14355 PF00107 Zinc-binding dehydrogenase CJ306_14360 PF01569 PAP2 superfamily CJ306_14410 PF07690 Major Facilitator Superfamily CJ306_14430 PF03009 Glycerophosphoryl diester phosphodiesterase family CJ306_14450 PF00155 Aminotransferase class I and II CJ306_14450 PF00392 Bacterial regulatory proteins, gntR family CJ306_14455 PF00892 EamA-like transporter family CJ306_14460 PF01270 Glycosyl hydrolases family 8 CJ306_14465 PF01156 Inosine-uridine preferring nucleoside hydrolase CJ306_14480 PF00293 NUDIX domain CJ306_14480 PF13344 Haloacid dehalogenase-like hydrolase CJ306_14500 PF07690 Major Facilitator Superfamily CJ306_14510 PF09297 NADH pyrophosphatase zinc ribbon domain CJ306_14510 PF00293 NUDIX domain CJ306_14515 PF02768 DNA polymerase III beta subunit, C-terminal domain CJ306_14515 PF02767 DNA polymerase III beta subunit, central domain CJ306_14515 PF00712 DNA polymerase III beta subunit, N-terminal domain CJ306_14525 PF12706 Beta-lactamase superfamily domain CJ306_14535 PF09234 Domain of unknown function (DUF1963) CJ306_14560 PF01734 Patatin-like phospholipase CJ306_14565 PF08000 Bacterial PH domain CJ306_14575 PF12867 DinB superfamily CJ306_14590 PF02673 Bacitracin resistance protein BacA CJ306_14600 PF01541 GIY-YIG catalytic domain CJ306_14630 PF00144 Beta-lactamase CJ306_14635 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase CJ306_14650 PF01266 FAD dependent oxidoreductase CJ306_14685 PF00486 Transcriptional regulatory protein, C terminal CJ306_14685 PF00072 Response regulator receiver domain CJ306_14690 PF16736 Single Cache-like CJ306_14690 PF00989 PAS fold CJ306_14690 PF00512 His Kinase A (phospho-acceptor) domain CJ306_14690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJ306_14725 PF00005 ABC transporter CJ306_14730 PF02687 FtsX-like permease family CJ306_14730 PF12704 MacB-like periplasmic core domain CJ306_14740 PF07859 alpha/beta hydrolase fold CJ306_14745 PF00282 Pyridoxal-dependent decarboxylase conserved domain CJ306_14750 PF00668 Condensation domain CJ306_14750 PF13193 AMP-binding enzyme C-terminal domain CJ306_14750 PF00550 Phosphopantetheine attachment site CJ306_14750 PF00501 AMP-binding enzyme CJ306_14760 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CJ306_14760 PF03714 Bacterial pullanase-associated domain CJ306_14760 PF00128 Alpha amylase, catalytic domain CJ306_14765 PF02868 Thermolysin metallopeptidase, alpha-helical domain CJ306_14765 PF07504 Fungalysin/Thermolysin Propeptide Motif CJ306_14765 PF01447 Thermolysin metallopeptidase, catalytic domain CJ306_14765 PF03413 Peptidase propeptide and YPEB domain CJ306_14770 PF00149 Calcineurin-like phosphoesterase CJ306_14770 PF02872 5'-nucleotidase, C-terminal domain CJ306_14795 PF00344 SecY translocase CJ306_14800 PF00892 EamA-like transporter family CJ306_14810 PF00561 alpha/beta hydrolase fold CJ306_14835 PF06081 Aromatic acid exporter family member 1 CJ306_14850 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) CJ306_14855 PF14620 YpeB sporulation CJ306_14855 PF03413 Peptidase propeptide and YPEB domain CJ306_14860 PF07486 Cell Wall Hydrolase CJ306_14860 PF01471 Putative peptidoglycan binding domain CJ306_14880 PF03301 Tryptophan 2,3-dioxygenase CJ306_14885 PF04199 Putative cyclase CJ306_14890 PF00266 Aminotransferase class-V CJ306_14895 PF08359 YsiA-like protein, C-terminal region CJ306_14895 PF00440 Bacterial regulatory proteins, tetR family CJ306_14900 PF00293 NUDIX domain CJ306_14900 PF13344 Haloacid dehalogenase-like hydrolase CJ306_14930 PF01590 GAF domain CJ306_14930 PF02954 Bacterial regulatory protein, Fis family CJ306_14930 PF00158 Sigma-54 interaction domain CJ306_14945 PF13302 Acetyltransferase (GNAT) domain CJ306_14950 PF00455 DeoR C terminal sensor domain CJ306_14950 PF08220 DeoR-like helix-turn-helix domain CJ306_14965 PF02082 Transcriptional regulator CJ306_14980 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CJ306_14980 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJ306_14985 PF02817 e3 binding domain CJ306_14985 PF00364 Biotin-requiring enzyme CJ306_14985 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CJ306_14990 PF02780 Transketolase, C-terminal domain CJ306_14990 PF02779 Transketolase, pyrimidine binding domain CJ306_14995 PF00676 Dehydrogenase E1 component CJ306_15005 PF00106 short chain dehydrogenase CJ306_15010 PF13673 Acetyltransferase (GNAT) domain CJ306_15010 PF04229 GrpB protein CJ306_15045 PF00528 Binding-protein-dependent transport system inner membrane component CJ306_15050 PF00005 ABC transporter CJ306_15050 PF00571 CBS domain CJ306_15055 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CJ306_15060 PF00574 Clp protease CJ306_15075 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) CJ306_15080 PF13673 Acetyltransferase (GNAT) domain CJ306_15085 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading CJ306_15085 PF18416 N-acetylglucosamine binding protein domain 2 CJ306_15090 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase CJ306_15095 PF03781 Sulfatase-modifying factor enzyme 1 CJ306_15100 PF01202 Shikimate kinase CJ306_15110 PF10990 Protein of unknown function (DUF2809) CJ306_15115 PF08241 Methyltransferase domain CJ306_15120 PF04237 YjbR CJ306_15160 PF00583 Acetyltransferase (GNAT) family CJ306_15165 PF13538 UvrD-like helicase C-terminal domain CJ306_15180 PF16124 RecQ zinc-binding CJ306_15180 PF09382 RQC domain CJ306_15180 PF00570 HRDC domain CJ306_15180 PF00271 Helicase conserved C-terminal domain CJ306_15180 PF00270 DEAD/DEAH box helicase CJ306_15220 PF12123 N-acetylmuramoyl-l-alanine amidase CJ306_15220 PF01510 N-acetylmuramoyl-L-alanine amidase CJ306_15240 PF01368 DHH family CJ306_15240 PF02833 DHHA2 domain CJ306_15245 PF18416 N-acetylglucosamine binding protein domain 2 CJ306_15245 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading CJ306_15260 PF02627 Carboxymuconolactone decarboxylase family CJ306_15265 PF01235 Sodium:alanine symporter family CJ306_15270 PF00171 Aldehyde dehydrogenase family CJ306_15275 PF00701 Dihydrodipicolinate synthetase family CJ306_15280 PF05544 Proline racemase CJ306_15285 PF05544 Proline racemase CJ306_15290 PF01266 FAD dependent oxidoreductase CJ306_15295 PF13188 PAS domain CJ306_15295 PF00158 Sigma-54 interaction domain CJ306_15295 PF02954 Bacterial regulatory protein, Fis family CJ306_15300 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJ306_15300 PF04324 BFD-like [2Fe-2S] binding domain CJ306_15310 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJ306_15310 PF04324 BFD-like [2Fe-2S] binding domain CJ306_15325 PF08876 Domain of unknown function (DUF1836) CJ306_15330 PF09335 SNARE associated Golgi protein CJ306_15340 PF04914 DltD protein CJ306_15350 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CJ306_15355 PF00877 NlpC/P60 family CJ306_15355 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain CJ306_15360 PF13378 Enolase C-terminal domain-like CJ306_15360 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CJ306_15375 PF00248 Aldo/keto reductase family CJ306_15380 PF01965 DJ-1/PfpI family CJ306_15410 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain CJ306_15410 PF02129 X-Pro dipeptidyl-peptidase (S15 family) CJ306_15420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJ306_15420 PF00512 His Kinase A (phospho-acceptor) domain CJ306_15420 PF00672 HAMP domain CJ306_15425 PF00072 Response regulator receiver domain CJ306_15425 PF00486 Transcriptional regulatory protein, C terminal CJ306_15455 PF03808 Glycosyl transferase WecB/TagA/CpsF family CJ306_15460 PF01432 Peptidase family M3 CJ306_15460 PF08439 Oligopeptidase F CJ306_15465 PF02645 Uncharacterised protein, DegV family COG1307 CJ306_15470 PF07552 Spore Coat Protein X and V domain CJ306_15505 PF07690 Major Facilitator Superfamily CJ306_15515 PF04519 Polymer-forming cytoskeletal CJ306_15520 PF13171 Protein of unknown function (DUF4004) CJ306_15525 PF12793 Sugar transport-related sRNA regulator N-term CJ306_15525 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CJ306_15530 PF07690 Major Facilitator Superfamily CJ306_15555 PF04226 Transglycosylase associated protein CJ306_15570 PF08241 Methyltransferase domain CJ306_15610 PF00155 Aminotransferase class I and II CJ306_15615 PF07977 FabA-like domain CJ306_15620 PF03630 Fumble CJ306_15640 PF00005 ABC transporter CJ306_15695 PF01594 AI-2E family transporter CJ306_15710 PF00296 Luciferase-like monooxygenase CJ306_15715 PF00528 Binding-protein-dependent transport system inner membrane component CJ306_15720 PF09084 NMT1/THI5 like CJ306_15725 PF00005 ABC transporter CJ306_15760 PF02522 Aminoglycoside 3-N-acetyltransferase CJ306_15770 PF13536 Putative multidrug resistance efflux transporter CJ306_15780 PF12867 DinB superfamily CJ306_15800 PF08713 DNA alkylation repair enzyme CJ306_15805 PF00291 Pyridoxal-phosphate dependent enzyme CJ306_15810 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CJ306_15820 PF01522 Polysaccharide deacetylase CJ306_15830 PF03741 Integral membrane protein TerC family CJ306_15835 PF00884 Sulfatase CJ306_15840 PF00005 ABC transporter CJ306_15840 PF12848 ABC transporter CJ306_15850 PF03176 MMPL family CJ306_15855 PF16295 Tetracyclin repressor-like, C-terminal domain CJ306_15855 PF00440 Bacterial regulatory proteins, tetR family CJ306_15865 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CJ306_15870 PF01842 ACT domain CJ306_15870 PF02153 Prephenate dehydrogenase CJ306_15875 PF00155 Aminotransferase class I and II CJ306_15880 PF01264 Chorismate synthase CJ306_15890 PF01817 Chorismate mutase type II CJ306_15890 PF00793 DAHP synthetase I family CJ306_15915 PF01636 Phosphotransferase enzyme family CJ306_15940 PF06725 3D domain CJ306_15940 PF01476 LysM domain CJ306_15950 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CJ306_15975 PF06039 Malate:quinone oxidoreductase (Mqo) CJ306_15980 PF13407 Periplasmic binding protein domain CJ306_15985 PF02653 Branched-chain amino acid transport system / permease component CJ306_15990 PF02653 Branched-chain amino acid transport system / permease component CJ306_16000 PF04198 Putative sugar-binding domain CJ306_16000 PF00325 Bacterial regulatory proteins, crp family CJ306_16005 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CJ306_16005 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CJ306_16015 PF01791 DeoC/LacD family aldolase CJ306_16030 PF03992 Antibiotic biosynthesis monooxygenase CJ306_16050 PF01773 Na+ dependent nucleoside transporter N-terminus CJ306_16050 PF07662 Na+ dependent nucleoside transporter C-terminus CJ306_16055 PF00171 Aldehyde dehydrogenase family CJ306_16060 PF00696 Amino acid kinase family CJ306_16060 PF01472 PUA domain CJ306_16070 PF03807 NADP oxidoreductase coenzyme F420-dependent CJ306_16070 PF14748 Pyrroline-5-carboxylate reductase dimerisation CJ306_16075 PF01546 Peptidase family M20/M25/M40 CJ306_16080 PF01614 Bacterial transcriptional regulator CJ306_16080 PF09339 IclR helix-turn-helix domain CJ306_16090 PF00324 Amino acid permease CJ306_16100 PF00487 Fatty acid desaturase CJ306_16105 PF05547 Immune inhibitor A peptidase M6 CJ306_16110 PF04294 VanW like protein CJ306_16115 PF00245 Alkaline phosphatase CJ306_16120 PF11188 Protein of unknown function (DUF2975) CJ306_16125 PF13443 Cro/C1-type HTH DNA-binding domain CJ306_16145 PF13302 Acetyltransferase (GNAT) domain CJ306_16150 PF12681 Glyoxalase-like domain CJ306_16175 PF07726 ATPase family associated with various cellular activities (AAA) CJ306_16175 PF17863 AAA lid domain CJ306_16190 PF07690 Major Facilitator Superfamily CJ306_16200 PF00535 Glycosyl transferase family 2 CJ306_16215 PF00535 Glycosyl transferase family 2 CJ306_16220 PF00535 Glycosyl transferase family 2 CJ306_16230 PF00202 Aminotransferase class-III CJ306_16235 PF06628 Catalase-related immune-responsive CJ306_16235 PF00199 Catalase CJ306_16240 PF04151 Bacterial pre-peptidase C-terminal domain CJ306_16240 PF18496 Collagenase G catalytic helper subdomain CJ306_16240 PF01752 Collagenase CJ306_16240 PF08453 Peptidase family M9 N-terminal CJ306_16250 PF01979 Amidohydrolase family CJ306_16250 PF13382 Adenine deaminase C-terminal domain CJ306_16255 PF00144 Beta-lactamase CJ306_16280 PF17863 AAA lid domain CJ306_16280 PF07726 ATPase family associated with various cellular activities (AAA) CJ306_16305 PF04740 LXG domain of WXG superfamily CJ306_16305 PF14436 Bacterial EndoU nuclease CJ306_16325 PF00881 Nitroreductase family CJ306_16330 PF01047 MarR family CJ306_16350 PF00293 NUDIX domain CJ306_16365 PF00005 ABC transporter CJ306_16370 PF00392 Bacterial regulatory proteins, gntR family CJ306_16380 PF16363 GDP-mannose 4,6 dehydratase CJ306_16385 PF00005 ABC transporter CJ306_16405 PF12833 Helix-turn-helix domain CJ306_16410 PF00583 Acetyltransferase (GNAT) family CJ306_16425 PF00892 EamA-like transporter family CJ306_16430 PF00392 Bacterial regulatory proteins, gntR family CJ306_16430 PF00155 Aminotransferase class I and II CJ306_16435 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 CJ306_16440 PF13031 Protein of unknown function (DUF3892) CJ306_16470 PF01925 Sulfite exporter TauE/SafE CJ306_16480 PF00324 Amino acid permease CJ306_16490 PF08713 DNA alkylation repair enzyme CJ306_16495 PF10898 Protein of unknown function (DUF2716) CJ306_16505 PF00293 NUDIX domain CJ306_16515 PF04989 Cephalosporin hydroxylase CJ306_16520 PF10502 Signal peptidase, peptidase S26 CJ306_16535 PF02146 Sir2 family CJ306_16540 PF01470 Pyroglutamyl peptidase CJ306_16560 PF03746 LamB/YcsF family CJ306_16565 PF02626 Carboxyltransferase domain, subdomain A and B CJ306_16570 PF02682 Carboxyltransferase domain, subdomain C and D CJ306_16575 PF01614 Bacterial transcriptional regulator CJ306_16575 PF09339 IclR helix-turn-helix domain CJ306_16580 PF10502 Signal peptidase, peptidase S26 CJ306_16585 PF03932 CutC family CJ306_16600 PF08028 Acyl-CoA dehydrogenase, C-terminal domain CJ306_16600 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CJ306_16600 PF02770 Acyl-CoA dehydrogenase, middle domain CJ306_16630 PF10903 Protein of unknown function (DUF2691) CJ306_16635 PF02915 Rubrerythrin CJ306_16650 PF00440 Bacterial regulatory proteins, tetR family CJ306_16655 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CJ306_16655 PF00391 PEP-utilising enzyme, mobile domain CJ306_16665 PF00753 Metallo-beta-lactamase superfamily CJ306_16680 PF07875 Coat F domain CJ306_16690 PF08892 YqcI/YcgG family CJ306_16695 PF01810 LysE type translocator CJ306_16700 PF00324 Amino acid permease CJ306_16710 PF00269 Small, acid-soluble spore proteins, alpha/beta type CJ306_16715 PF10710 Protein of unknown function (DUF2512) CJ306_16720 PF11553 Protein of unknown function (DUF3231) CJ306_16725 PF00269 Small, acid-soluble spore proteins, alpha/beta type CJ306_16730 PF08240 Alcohol dehydrogenase GroES-like domain CJ306_16730 PF13823 Alcohol dehydrogenase GroES-associated CJ306_16730 PF00107 Zinc-binding dehydrogenase CJ306_16745 PF10415 Fumarase C C-terminus CJ306_16745 PF00206 Lyase CJ306_16750 PF17763 Glutaminase/Asparaginase C-terminal domain CJ306_16750 PF00710 Asparaginase, N-terminal CJ306_16755 PF01381 Helix-turn-helix CJ306_16775 PF05504 Spore germination B3/ GerAC like, C-terminal CJ306_16780 PF03845 Spore germination protein CJ306_16785 PF03323 Bacillus/Clostridium GerA spore germination protein CJ306_16790 PF13188 PAS domain CJ306_16790 PF13426 PAS domain CJ306_16790 PF00512 His Kinase A (phospho-acceptor) domain CJ306_16790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJ306_16790 PF00989 PAS fold CJ306_16795 PF05791 Bacillus haemolytic enterotoxin (HBL) CJ306_16800 PF05791 Bacillus haemolytic enterotoxin (HBL) CJ306_16815 PF17853 GGDEF-like domain CJ306_16815 PF12833 Helix-turn-helix domain CJ306_16830 PF00269 Small, acid-soluble spore proteins, alpha/beta type CJ306_16835 PF02151 UvrB/uvrC motif CJ306_16835 PF08459 UvrC Helix-hairpin-helix N-terminal CJ306_16835 PF01541 GIY-YIG catalytic domain CJ306_16835 PF12826 Helix-hairpin-helix motif CJ306_16840 PF13520 Amino acid permease CJ306_16845 PF05525 Branched-chain amino acid transport protein CJ306_16850 PF14748 Pyrroline-5-carboxylate reductase dimerisation CJ306_16850 PF03807 NADP oxidoreductase coenzyme F420-dependent CJ306_16855 PF13564 DoxX-like family CJ306_16860 PF00390 Malic enzyme, N-terminal domain CJ306_16860 PF03949 Malic enzyme, NAD binding domain CJ306_16870 PF05504 Spore germination B3/ GerAC like, C-terminal CJ306_16875 PF03845 Spore germination protein CJ306_16880 PF03323 Bacillus/Clostridium GerA spore germination protein CJ306_16890 PF08664 YcbB domain CJ306_16890 PF00072 Response regulator receiver domain CJ306_16895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJ306_16900 PF04960 Glutaminase CJ306_16905 PF01235 Sodium:alanine symporter family CJ306_16930 PF00144 Beta-lactamase CJ306_16940 PF00149 Calcineurin-like phosphoesterase CJ306_16940 PF17936 Bacterial Ig domain CJ306_16940 PF02872 5'-nucleotidase, C-terminal domain CJ306_16945 PF00561 alpha/beta hydrolase fold CJ306_16950 PF00857 Isochorismatase family CJ306_16965 PF01979 Amidohydrolase family CJ306_16970 PF03466 LysR substrate binding domain CJ306_16970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJ306_16975 PF01047 MarR family CJ306_16980 PF01544 CorA-like Mg2+ transporter protein CJ306_17000 PF12146 Serine aminopeptidase, S33 CJ306_17000 PF13026 Protein of unknown function (DUF3887) CJ306_17015 PF03073 TspO/MBR family CJ306_17020 PF03441 FAD binding domain of DNA photolyase CJ306_17020 PF00875 DNA photolyase CJ306_17040 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) CJ306_17045 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CJ306_17045 PF00361 Proton-conducting membrane transporter CJ306_17050 PF10057 Uncharacterized conserved protein (DUF2294) CJ306_17060 PF05504 Spore germination B3/ GerAC like, C-terminal CJ306_17065 PF03323 Bacillus/Clostridium GerA spore germination protein CJ306_17070 PF01522 Polysaccharide deacetylase CJ306_17080 PF01040 UbiA prenyltransferase family CJ306_17085 PF12833 Helix-turn-helix domain CJ306_17085 PF01965 DJ-1/PfpI family CJ306_17095 PF01451 Low molecular weight phosphotyrosine protein phosphatase CJ306_17100 PF01758 Sodium Bile acid symporter family CJ306_17105 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CJ306_17110 PF01022 Bacterial regulatory protein, arsR family CJ306_17125 PF01872 RibD C-terminal domain CJ306_17130 PF07993 Male sterility protein CJ306_17130 PF00550 Phosphopantetheine attachment site CJ306_17135 PF18665 Tetracyclin repressor-like, C-terminal domain CJ306_17135 PF00440 Bacterial regulatory proteins, tetR family CJ306_17140 PF07690 Major Facilitator Superfamily CJ306_17145 PF00440 Bacterial regulatory proteins, tetR family CJ306_17155 PF01037 Lrp/AsnC ligand binding domain CJ306_17170 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CJ306_17215 PF00144 Beta-lactamase CJ306_17220 PF00144 Beta-lactamase CJ306_17225 PF08803 Putative mono-oxygenase ydhR CJ306_17235 PF12802 MarR family CJ306_17255 PF00486 Transcriptional regulatory protein, C terminal CJ306_17255 PF00072 Response regulator receiver domain CJ306_17260 PF00672 HAMP domain CJ306_17260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJ306_17260 PF00512 His Kinase A (phospho-acceptor) domain CJ306_17285 PF00175 Oxidoreductase NAD-binding domain CJ306_17285 PF00067 Cytochrome P450 CJ306_17285 PF00667 FAD binding domain CJ306_17285 PF00258 Flavodoxin CJ306_17290 PF07690 Major Facilitator Superfamily CJ306_17315 PF00291 Pyridoxal-phosphate dependent enzyme CJ306_17340 PF00753 Metallo-beta-lactamase superfamily CJ306_17345 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family CJ306_17355 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CJ306_17355 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CJ306_17360 PF04072 Leucine carboxyl methyltransferase CJ306_17375 PF00005 ABC transporter CJ306_17380 PF02687 FtsX-like permease family CJ306_17400 PF00672 HAMP domain CJ306_17400 PF00512 His Kinase A (phospho-acceptor) domain CJ306_17400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJ306_17405 PF00486 Transcriptional regulatory protein, C terminal CJ306_17405 PF00072 Response regulator receiver domain CJ306_17415 PF01047 MarR family CJ306_17420 PF00583 Acetyltransferase (GNAT) family CJ306_17425 PF04299 Putative FMN-binding domain CJ306_17430 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CJ306_17430 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CJ306_17440 PF02016 LD-carboxypeptidase N-terminal domain CJ306_17440 PF17676 LD-carboxypeptidase C-terminal domain CJ306_17465 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CJ306_17465 PF01842 ACT domain CJ306_17465 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CJ306_17470 PF00266 Aminotransferase class-V CJ306_17485 PF07883 Cupin domain CJ306_17495 PF01497 Periplasmic binding protein CJ306_17495 PF12833 Helix-turn-helix domain CJ306_17500 PF01804 Penicillin amidase CJ306_17515 PF01476 LysM domain CJ306_17515 PF01510 N-acetylmuramoyl-L-alanine amidase CJ306_17515 PF01471 Putative peptidoglycan binding domain CJ306_17850 PF04634 Protein of unknown function, DUF600 CJ306_17895 PF04740 LXG domain of WXG superfamily CJ306_17920 PF02557 D-alanyl-D-alanine carboxypeptidase CJ306_17925 PF09587 Bacterial capsule synthesis protein PGA_cap CJ306_17930 PF14044 NETI protein CJ306_17935 PF07690 Major Facilitator Superfamily CJ306_17945 PF12697 Alpha/beta hydrolase family CJ306_17950 PF01047 MarR family CJ306_17955 PF07690 Major Facilitator Superfamily CJ306_17970 PF02667 Short chain fatty acid transporter CJ306_17985 PF02525 Flavodoxin-like fold CJ306_18005 PF14256 YwiC-like protein CJ306_18015 PF00005 ABC transporter CJ306_18035 PF03737 Aldolase/RraA CJ306_18040 PF03606 C4-dicarboxylate anaerobic carrier CJ306_18045 PF04231 Endonuclease I CJ306_18050 PF04073 Aminoacyl-tRNA editing domain CJ306_18055 PF03129 Anticodon binding domain CJ306_18055 PF13393 Histidyl-tRNA synthetase CJ306_18070 PF01638 HxlR-like helix-turn-helix CJ306_18075 PF00881 Nitroreductase family CJ306_18085 PF02887 Pyruvate kinase, alpha/beta domain CJ306_18085 PF00391 PEP-utilising enzyme, mobile domain CJ306_18085 PF00224 Pyruvate kinase, barrel domain CJ306_18120 PF00005 ABC transporter CJ306_18145 PF13419 Haloacid dehalogenase-like hydrolase CJ306_18175 PF00293 NUDIX domain CJ306_18175 PF13344 Haloacid dehalogenase-like hydrolase CJ306_18180 PF00579 tRNA synthetases class I (W and Y) CJ306_18185 PF13288 DXP reductoisomerase C-terminal domain CJ306_18185 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain CJ306_18185 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CJ306_18190 PF01594 AI-2E family transporter CJ306_18220 PF08003 Protein of unknown function (DUF1698) CJ306_18230 PF07690 Major Facilitator Superfamily CJ306_18250 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CJ306_18260 PF03471 Transporter associated domain CJ306_18260 PF01595 Cyclin M transmembrane N-terminal domain CJ306_18260 PF00571 CBS domain CJ306_18265 PF13411 MerR HTH family regulatory protein CJ306_18275 PF00483 Nucleotidyl transferase CJ306_18280 PF16363 GDP-mannose 4,6 dehydratase CJ306_18285 PF08421 Putative zinc binding domain CJ306_18285 PF08484 C-methyltransferase C-terminal domain CJ306_18300 PF00892 EamA-like transporter family CJ306_18310 PF00805 Pentapeptide repeats (8 copies) CJ306_18315 PF06906 Protein of unknown function (DUF1272) CJ306_18320 PF10282 Lactonase, 7-bladed beta-propeller CJ306_18325 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CJ306_18325 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CJ306_18330 PF02447 GntP family permease CJ306_18335 PF00923 Transaldolase/Fructose-6-phosphate aldolase CJ306_18340 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain CJ306_18340 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CJ306_18345 PF02779 Transketolase, pyrimidine binding domain CJ306_18345 PF02780 Transketolase, C-terminal domain CJ306_18345 PF00456 Transketolase, thiamine diphosphate binding domain CJ306_18350 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain CJ306_18350 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain CJ306_18355 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain CJ306_18355 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain CJ306_18360 PF00107 Zinc-binding dehydrogenase CJ306_18360 PF08240 Alcohol dehydrogenase GroES-like domain CJ306_18365 PF00296 Luciferase-like monooxygenase CJ306_18370 PF00550 Phosphopantetheine attachment site CJ306_18370 PF08659 KR domain CJ306_18370 PF02801 Beta-ketoacyl synthase, C-terminal domain CJ306_18370 PF00107 Zinc-binding dehydrogenase CJ306_18370 PF00109 Beta-ketoacyl synthase, N-terminal domain CJ306_18370 PF16197 Ketoacyl-synthetase C-terminal extension CJ306_18370 PF14765 Polyketide synthase dehydratase CJ306_18370 PF00698 Acyl transferase domain CJ306_18370 PF08240 Alcohol dehydrogenase GroES-like domain CJ306_18380 PF00106 short chain dehydrogenase CJ306_18390 PF03413 Peptidase propeptide and YPEB domain CJ306_18390 PF02868 Thermolysin metallopeptidase, alpha-helical domain CJ306_18390 PF01447 Thermolysin metallopeptidase, catalytic domain CJ306_18390 PF07504 Fungalysin/Thermolysin Propeptide Motif CJ306_18400 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CJ306_18400 PF00672 HAMP domain CJ306_18400 PF12729 Four helix bundle sensory module for signal transduction CJ306_18405 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) CJ306_18410 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CJ306_18410 PF01872 RibD C-terminal domain CJ306_18415 PF00925 GTP cyclohydrolase II CJ306_18420 PF01638 HxlR-like helix-turn-helix CJ306_18440 PF00248 Aldo/keto reductase family CJ306_18445 PF07690 Major Facilitator Superfamily CJ306_18460 PF03928 Haem-degrading CJ306_18510 PF03960 ArsC family CJ306_18520 PF01638 HxlR-like helix-turn-helix CJ306_18525 PF07702 UTRA domain CJ306_18525 PF00392 Bacterial regulatory proteins, gntR family CJ306_18530 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CJ306_18530 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CJ306_18540 PF01638 HxlR-like helix-turn-helix CJ306_18545 PF01638 HxlR-like helix-turn-helix CJ306_18550 PF00248 Aldo/keto reductase family CJ306_18595 PF02567 Phenazine biosynthesis-like protein CJ306_18600 PF00501 AMP-binding enzyme CJ306_18600 PF13193 AMP-binding enzyme C-terminal domain CJ306_18605 PF02525 Flavodoxin-like fold CJ306_18610 PF01638 HxlR-like helix-turn-helix CJ306_18620 PF01022 Bacterial regulatory protein, arsR family CJ306_18625 PF01522 Polysaccharide deacetylase CJ306_18625 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain CJ306_18630 PF12791 Anti-sigma factor N-terminus CJ306_18635 PF04542 Sigma-70 region 2 CJ306_18640 PF00535 Glycosyl transferase family 2 CJ306_18640 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 CJ306_18670 PF01061 ABC-2 type transporter CJ306_18675 PF13732 Domain of unknown function (DUF4162) CJ306_18675 PF00005 ABC transporter CJ306_18695 PF03063 Prismane/CO dehydrogenase family CJ306_18705 PF00753 Metallo-beta-lactamase superfamily CJ306_18760 PF00753 Metallo-beta-lactamase superfamily CJ306_18765 PF00324 Amino acid permease CJ306_18770 PF07690 Major Facilitator Superfamily CJ306_18800 PF02585 GlcNAc-PI de-N-acetylase CJ306_18805 PF08830 Protein of unknown function (DUF1806) CJ306_18810 PF03600 Citrate transporter CJ306_18820 PF00583 Acetyltransferase (GNAT) family CJ306_18825 PF01497 Periplasmic binding protein CJ306_18830 PF01032 FecCD transport family CJ306_18835 PF01032 FecCD transport family CJ306_18840 PF05675 Protein of unknown function (DUF817) CJ306_18845 PF03176 MMPL family CJ306_18870 PF10901 Protein of unknown function (DUF2690) CJ306_18880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJ306_18880 PF03466 LysR substrate binding domain CJ306_18885 PF00107 Zinc-binding dehydrogenase CJ306_18885 PF08240 Alcohol dehydrogenase GroES-like domain CJ306_18900 PF01713 Smr domain CJ306_18900 PF00488 MutS domain V CJ306_18910 PF00128 Alpha amylase, catalytic domain CJ306_18910 PF09154 Domain of unknown function (DUF1939) CJ306_18915 PF00797 N-acetyltransferase CJ306_18920 PF08439 Oligopeptidase F CJ306_18920 PF01432 Peptidase family M3 CJ306_18925 PF04371 Porphyromonas-type peptidyl-arginine deiminase CJ306_18945 PF06146 Phosphate-starvation-inducible E CJ306_18950 PF04371 Porphyromonas-type peptidyl-arginine deiminase CJ306_18960 PF00144 Beta-lactamase CJ306_18975 PF03466 LysR substrate binding domain CJ306_18975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJ306_18985 PF03009 Glycerophosphoryl diester phosphodiesterase family CJ306_18990 PF01494 FAD binding domain CJ306_18995 PF01022 Bacterial regulatory protein, arsR family CJ306_19000 PF08240 Alcohol dehydrogenase GroES-like domain CJ306_19000 PF00107 Zinc-binding dehydrogenase CJ306_19005 PF02696 Uncharacterized ACR, YdiU/UPF0061 family CJ306_19010 PF18801 response regulator aspartate phosphatase H, N terminal CJ306_19010 PF17874 MalT-like TPR region CJ306_19020 PF04299 Putative FMN-binding domain CJ306_19040 PF01565 FAD binding domain CJ306_19040 PF02913 FAD linked oxidases, C-terminal domain CJ306_19075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJ306_19075 PF00989 PAS fold CJ306_19075 PF00512 His Kinase A (phospho-acceptor) domain CJ306_19080 PF18496 Collagenase G catalytic helper subdomain CJ306_19080 PF01752 Collagenase CJ306_19080 PF08453 Peptidase family M9 N-terminal CJ306_19085 PF02308 MgtC family CJ306_19095 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CJ306_19100 PF04294 VanW like protein CJ306_19110 PF13037 Domain of unknown function (DUF3898) CJ306_19110 PF13039 Protein of unknown function (DUF3900) CJ306_19130 PF00313 'Cold-shock' DNA-binding domain CJ306_19140 PF00258 Flavodoxin CJ306_19150 PF00293 NUDIX domain CJ306_19160 PF00132 Bacterial transferase hexapeptide (six repeats) CJ306_19170 PF00106 short chain dehydrogenase CJ306_19180 PF00206 Lyase CJ306_19180 PF14698 Argininosuccinate lyase C-terminal CJ306_19190 PF01156 Inosine-uridine preferring nucleoside hydrolase CJ306_19195 PF00474 Sodium:solute symporter family CJ306_19200 PF06196 Protein of unknown function (DUF997) CJ306_19205 PF00171 Aldehyde dehydrogenase family CJ306_19215 PF14151 YfhD-like protein CJ306_19220 PF13243 Squalene-hopene cyclase C-terminal domain CJ306_19220 PF13249 Squalene-hopene cyclase N-terminal domain CJ306_19225 PF02681 Divergent PAP2 family CJ306_19230 PF00892 EamA-like transporter family CJ306_19235 PF06961 Protein of unknown function (DUF1294) CJ306_19250 PF10609 NUBPL iron-transfer P-loop NTPase CJ306_19260 PF02391 MoaE protein CJ306_19265 PF03454 MoeA C-terminal region (domain IV) CJ306_19265 PF00994 Probable molybdopterin binding domain CJ306_19265 PF03453 MoeA N-terminal region (domain I and II) CJ306_19270 PF00899 ThiF family CJ306_19275 PF01226 Formate/nitrite transporter CJ306_19285 PF06463 Molybdenum Cofactor Synthesis C CJ306_19285 PF04055 Radical SAM superfamily CJ306_19290 PF02634 FdhD/NarQ family CJ306_19295 PF10057 Uncharacterized conserved protein (DUF2294) CJ306_19300 PF07849 Protein of unknown function (DUF1641) CJ306_19305 PF01568 Molydopterin dinucleotide binding domain CJ306_19305 PF00384 Molybdopterin oxidoreductase CJ306_19305 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CJ306_19305 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CJ306_19305 PF00037 4Fe-4S binding domain CJ306_19315 PF03323 Bacillus/Clostridium GerA spore germination protein CJ306_19330 PF13520 Amino acid permease CJ306_19365 PF08241 Methyltransferase domain CJ306_19370 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CJ306_19375 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CJ306_19380 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CJ306_19385 PF03816 Cell envelope-related transcriptional attenuator domain CJ306_19395 PF08281 Sigma-70, region 4 CJ306_19395 PF04542 Sigma-70 region 2 CJ306_19405 PF13732 Domain of unknown function (DUF4162) CJ306_19405 PF00005 ABC transporter CJ306_19425 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CJ306_19425 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CJ306_19430 PF03989 DNA gyrase C-terminal domain, beta-propeller CJ306_19430 PF00521 DNA gyrase/topoisomerase IV, subunit A CJ306_19435 PF00204 DNA gyrase B CJ306_19435 PF01751 Toprim domain CJ306_19435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJ306_19435 PF00986 DNA gyrase B subunit, carboxyl terminus CJ306_19445 PF13380 CoA binding domain CJ306_19450 PF13180 PDZ domain CJ306_19455 PF00486 Transcriptional regulatory protein, C terminal CJ306_19455 PF00072 Response regulator receiver domain CJ306_19460 PF04055 Radical SAM superfamily CJ306_19465 PF03477 ATP cone domain CJ306_19465 PF13597 Anaerobic ribonucleoside-triphosphate reductase CJ306_19470 PF02660 Glycerol-3-phosphate acyltransferase CJ306_19475 PF01521 Iron-sulphur cluster biosynthesis CJ306_19480 PF03061 Thioesterase superfamily CJ306_19485 PF01385 Probable transposase CJ306_19485 PF07282 Putative transposase DNA-binding domain CJ306_19485 PF12323 Helix-turn-helix domain CJ306_19490 PF01476 LysM domain CJ306_19490 PF00704 Glycosyl hydrolases family 18 CJ306_19500 PF08177 Small acid-soluble spore protein N family CJ306_19505 PF13040 Fur-regulated basic protein B CJ306_19510 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CJ306_19510 PF02811 PHP domain CJ306_19510 PF01336 OB-fold nucleic acid binding domain CJ306_19510 PF11490 DNA polymerase III polC-type N-terminus II CJ306_19510 PF14579 Helix-hairpin-helix motif CJ306_19510 PF07733 Bacterial DNA polymerase III alpha NTPase domain CJ306_19510 PF00929 Exonuclease CJ306_19515 PF00578 AhpC/TSA family CJ306_19530 PF00005 ABC transporter CJ306_19530 PF00664 ABC transporter transmembrane region CJ306_19535 PF00330 Aconitase family (aconitate hydratase) CJ306_19535 PF00694 Aconitase C-terminal domain CJ306_19545 PF01522 Polysaccharide deacetylase CJ306_19555 PF08179 Small acid-soluble spore protein P family CJ306_19565 PF07690 Major Facilitator Superfamily CJ306_19575 PF01411 tRNA synthetases class II (A) CJ306_19575 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CJ306_19575 PF02272 DHHA1 domain CJ306_19580 PF13344 Haloacid dehalogenase-like hydrolase CJ306_19580 PF00293 NUDIX domain CJ306_19590 PF00108 Thiolase, N-terminal domain CJ306_19590 PF02803 Thiolase, C-terminal domain CJ306_19595 PF13193 AMP-binding enzyme C-terminal domain CJ306_19595 PF00501 AMP-binding enzyme CJ306_19600 PF02632 BioY family CJ306_19605 PF13193 AMP-binding enzyme C-terminal domain CJ306_19605 PF00501 AMP-binding enzyme CJ306_19630 PF05532 CsbD-like CJ306_19650 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CJ306_19650 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CJ306_19665 PF13426 PAS domain CJ306_19665 PF13188 PAS domain CJ306_19665 PF00512 His Kinase A (phospho-acceptor) domain CJ306_19665 PF00989 PAS fold CJ306_19665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJ306_19670 PF01738 Dienelactone hydrolase family CJ306_19675 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CJ306_19680 PF00474 Sodium:solute symporter family CJ306_19685 PF01645 Conserved region in glutamate synthase CJ306_19690 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CJ306_19695 PF02559 CarD-like/TRCF domain CJ306_19700 PF00491 Arginase family CJ306_19705 PF01979 Amidohydrolase family CJ306_19710 PF01175 Urocanase Rossmann-like domain CJ306_19710 PF17392 Urocanase C-terminal domain CJ306_19710 PF17391 Urocanase N-terminal domain CJ306_19715 PF00221 Aromatic amino acid lyase CJ306_19720 PF09021 HutP CJ306_19750 PF11084 Protein of unknown function (DUF2621) CJ306_19755 PF07301 Protein of unknown function (DUF1453) CJ306_19760 PF02683 Cytochrome C biogenesis protein transmembrane region CJ306_19785 PF00005 ABC transporter CJ306_19800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJ306_19800 PF03466 LysR substrate binding domain CJ306_19805 PF03788 LrgA family CJ306_19810 PF04172 LrgB-like family CJ306_19815 PF00293 NUDIX domain CJ306_19815 PF13344 Haloacid dehalogenase-like hydrolase CJ306_19825 PF01925 Sulfite exporter TauE/SafE CJ306_19845 PF01183 Glycosyl hydrolases family 25 CJ306_19845 PF08239 Bacterial SH3 domain CJ306_19850 PF00005 ABC transporter CJ306_19850 PF00664 ABC transporter transmembrane region CJ306_19855 PF00664 ABC transporter transmembrane region CJ306_19855 PF00005 ABC transporter CJ306_19860 PF03672 Uncharacterised protein family (UPF0154) CJ306_19865 PF10747 Sporulation inhibitor of replication protein SirA CJ306_19870 PF02779 Transketolase, pyrimidine binding domain CJ306_19870 PF00456 Transketolase, thiamine diphosphate binding domain CJ306_19870 PF02780 Transketolase, C-terminal domain CJ306_19875 PF00528 Binding-protein-dependent transport system inner membrane component CJ306_19880 PF00528 Binding-protein-dependent transport system inner membrane component CJ306_19885 PF00005 ABC transporter CJ306_19890 PF00497 Bacterial extracellular solute-binding proteins, family 3 CJ306_19895 PF00149 Calcineurin-like phosphoesterase CJ306_19895 PF02872 5'-nucleotidase, C-terminal domain CJ306_19900 PF05979 Bacterial protein of unknown function (DUF896) CJ306_19905 PF00239 Resolvase, N terminal domain CJ306_19910 PF01726 LexA DNA binding domain CJ306_19910 PF00717 Peptidase S24-like CJ306_19925 PF03551 Transcriptional regulator PadR-like family CJ306_19935 PF12123 N-acetylmuramoyl-l-alanine amidase CJ306_19935 PF01510 N-acetylmuramoyl-L-alanine amidase CJ306_19980 PF00120 Glutamine synthetase, catalytic domain CJ306_19980 PF03951 Glutamine synthetase, beta-Grasp domain CJ306_19985 PF13411 MerR HTH family regulatory protein CJ306_19990 PF06838 Methionine gamma-lyase CJ306_19995 PF16360 GTP-binding GTPase Middle Region CJ306_19995 PF13167 GTP-binding GTPase N-terminal CJ306_19995 PF01926 50S ribosome-binding GTPase CJ306_20000 PF03458 UPF0126 domain CJ306_20005 PF00004 ATPase family associated with various cellular activities (AAA) CJ306_20005 PF17866 AAA lid domain CJ306_20030 PF17209 Hfq protein CJ306_20045 PF01476 LysM domain CJ306_20045 PF06725 3D domain CJ306_20055 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CJ306_20055 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CJ306_20060 PF00294 pfkB family carbohydrate kinase CJ306_20065 PF08220 DeoR-like helix-turn-helix domain CJ306_20065 PF00455 DeoR C terminal sensor domain CJ306_20070 PF00465 Iron-containing alcohol dehydrogenase CJ306_20075 PF04238 Protein of unknown function (DUF420) CJ306_20090 PF00324 Amino acid permease CJ306_20100 PF00041 Fibronectin type III domain CJ306_20100 PF00704 Glycosyl hydrolases family 18 CJ306_20105 PF00149 Calcineurin-like phosphoesterase CJ306_20105 PF10518 TAT (twin-arginine translocation) pathway signal sequence CJ306_20110 PF01226 Formate/nitrite transporter CJ306_20115 PF00216 Bacterial DNA-binding protein CJ306_20125 PF00403 Heavy-metal-associated domain CJ306_20130 PF00403 Heavy-metal-associated domain CJ306_20135 PF02583 Metal-sensitive transcriptional repressor CJ306_20145 PF00756 Putative esterase CJ306_20150 PF00005 ABC transporter CJ306_20155 PF01032 FecCD transport family CJ306_20160 PF01032 FecCD transport family CJ306_20165 PF01497 Periplasmic binding protein CJ306_20170 PF03372 Endonuclease/Exonuclease/phosphatase family CJ306_20175 PF12833 Helix-turn-helix domain CJ306_20175 PF02805 Metal binding domain of Ada CJ306_20180 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CJ306_20180 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CJ306_20185 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain CJ306_20185 PF00730 HhH-GPD superfamily base excision DNA repair protein CJ306_20190 PF01546 Peptidase family M20/M25/M40 CJ306_20190 PF07687 Peptidase dimerisation domain CJ306_20205 PF00561 alpha/beta hydrolase fold CJ306_20210 PF00563 EAL domain CJ306_20210 PF00990 Diguanylate cyclase, GGDEF domain CJ306_20210 PF03707 Bacterial signalling protein N terminal repeat CJ306_20215 PF04101 Glycosyltransferase family 28 C-terminal domain CJ306_20215 PF03033 Glycosyltransferase family 28 N-terminal domain CJ306_20225 PF16363 GDP-mannose 4,6 dehydratase CJ306_20230 PF08485 Polysaccharide biosynthesis protein C-terminal CJ306_20230 PF02719 Polysaccharide biosynthesis protein CJ306_20245 PF10787 Uncharacterised protein from bacillus cereus group CJ306_20250 PF04172 LrgB-like family CJ306_20255 PF03788 LrgA family CJ306_20260 PF00392 Bacterial regulatory proteins, gntR family CJ306_20260 PF00155 Aminotransferase class I and II CJ306_20270 PF00392 Bacterial regulatory proteins, gntR family CJ306_20270 PF07702 UTRA domain CJ306_20275 PF00232 Glycosyl hydrolase family 1 CJ306_20280 PF00388 Phosphatidylinositol-specific phospholipase C, X domain CJ306_20285 PF00082 Subtilase family CJ306_20290 PF07486 Cell Wall Hydrolase CJ306_20305 PF00884 Sulfatase CJ306_20320 PF08676 MutL C terminal dimerisation domain CJ306_20320 PF01119 DNA mismatch repair protein, C-terminal domain CJ306_20325 PF00488 MutS domain V CJ306_20325 PF05192 MutS domain III CJ306_20325 PF05190 MutS family domain IV CJ306_20325 PF05188 MutS domain II CJ306_20325 PF01624 MutS domain I CJ306_20330 PF10628 Outer spore coat protein E (CotE) CJ306_20335 PF06133 Control of competence regulator ComK, YlbF/YmcA CJ306_20340 PF01938 TRAM domain CJ306_20340 PF04055 Radical SAM superfamily CJ306_20340 PF00919 Uncharacterized protein family UPF0004 CJ306_20345 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CJ306_20350 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase CJ306_20350 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg CJ306_20350 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II CJ306_20355 PF01244 Membrane dipeptidase (Peptidase family M19) CJ306_20360 PF04232 Stage V sporulation protein S (SpoVS) CJ306_20365 PF13277 YmdB-like protein CJ306_20370 PF00013 KH domain CJ306_20370 PF01966 HD domain CJ306_20370 PF12072 Domain of unknown function (DUF3552) CJ306_20375 PF00154 recA bacterial DNA recombination protein CJ306_20380 PF02464 Competence-damaged protein CJ306_20380 PF00994 Probable molybdopterin binding domain CJ306_20380 PF18146 Damage-inducible protein CinA KH domain CJ306_20385 PF01066 CDP-alcohol phosphatidyltransferase CJ306_20390 PF13464 Domain of unknown function (DUF4115) CJ306_20395 PF11868 Protein of unknown function (DUF3388) CJ306_20400 PF11588 Protein of unknown function (DUF3243) CJ306_20410 PF05193 Peptidase M16 inactive domain CJ306_20410 PF00675 Insulinase (Peptidase family M16) CJ306_20415 PF05193 Peptidase M16 inactive domain CJ306_20440 PF00392 Bacterial regulatory proteins, gntR family CJ306_20440 PF07702 UTRA domain CJ306_20450 PF17854 FtsK alpha domain CJ306_20450 PF01580 FtsK/SpoIIIE family CJ306_20450 PF09397 Ftsk gamma domain CJ306_20455 PF14035 YlzJ-like protein CJ306_20460 PF00574 Clp protease CJ306_20465 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CJ306_20465 PF00753 Metallo-beta-lactamase superfamily CJ306_20465 PF17770 Ribonuclease J C-terminal domain CJ306_20470 PF00701 Dihydrodipicolinate synthetase family CJ306_20475 PF00696 Amino acid kinase family CJ306_20475 PF13840 ACT domain CJ306_20480 PF01118 Semialdehyde dehydrogenase, NAD binding domain CJ306_20480 PF02774 Semialdehyde dehydrogenase, dimerisation domain CJ306_20485 PF02441 Flavoprotein CJ306_20490 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CJ306_20490 PF16924 Dipicolinate synthase subunit A N-terminal domain CJ306_20495 PF05239 PRC-barrel domain CJ306_20500 PF00675 Insulinase (Peptidase family M16) CJ306_20500 PF05193 Peptidase M16 inactive domain CJ306_20505 PF01522 Polysaccharide deacetylase CJ306_20510 PF01138 3' exoribonuclease family, domain 1 CJ306_20510 PF00013 KH domain CJ306_20510 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CJ306_20510 PF00575 S1 RNA binding domain CJ306_20510 PF03725 3' exoribonuclease family, domain 2 CJ306_20515 PF00312 Ribosomal protein S15 CJ306_20520 PF01687 Riboflavin kinase CJ306_20520 PF06574 FAD synthetase CJ306_20525 PF16198 tRNA pseudouridylate synthase B C-terminal domain CJ306_20525 PF01509 TruB family pseudouridylate synthase (N terminal domain) CJ306_20530 PF02033 Ribosome-binding factor A CJ306_20535 PF04456 Protein of unknown function (DUF503) CJ306_20540 PF11987 Translation-initiation factor 2 CJ306_20540 PF00009 Elongation factor Tu GTP binding domain CJ306_20540 PF04760 Translation initiation factor IF-2, N-terminal region CJ306_20545 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family CJ306_20550 PF04296 Protein of unknown function (DUF448) CJ306_20555 PF00575 S1 RNA binding domain CJ306_20555 PF08529 NusA N-terminal domain CJ306_20555 PF13184 NusA-like KH domain CJ306_20560 PF02576 RimP N-terminal domain CJ306_20560 PF17384 RimP C-terminal SH3 domain CJ306_20565 PF14579 Helix-hairpin-helix motif CJ306_20565 PF00929 Exonuclease CJ306_20565 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CJ306_20565 PF07733 Bacterial DNA polymerase III alpha NTPase domain CJ306_20565 PF02811 PHP domain CJ306_20565 PF14480 DNA polymerase III polC-type N-terminus I CJ306_20565 PF11490 DNA polymerase III polC-type N-terminus II CJ306_20570 PF04073 Aminoacyl-tRNA editing domain CJ306_20570 PF03129 Anticodon binding domain CJ306_20570 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CJ306_20575 PF17820 PDZ domain CJ306_20575 PF02163 Peptidase family M50 CJ306_20580 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain CJ306_20580 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CJ306_20580 PF13288 DXP reductoisomerase C-terminal domain CJ306_20590 PF01255 Putative undecaprenyl diphosphate synthase CJ306_20595 PF01765 Ribosome recycling factor CJ306_20600 PF00696 Amino acid kinase family CJ306_20605 PF00889 Elongation factor TS CJ306_20610 PF00318 Ribosomal protein S2 CJ306_20615 PF06018 CodY GAF-like domain CJ306_20615 PF08222 CodY helix-turn-helix domain CJ306_20620 PF10431 C-terminal, D2-small domain, of ClpB protein CJ306_20620 PF07724 AAA domain (Cdc48 subfamily) CJ306_20620 PF00004 ATPase family associated with various cellular activities (AAA) CJ306_20625 PF00227 Proteasome subunit CJ306_20630 PF00589 Phage integrase family CJ306_20630 PF02899 Phage integrase, N-terminal SAM-like domain CJ306_20635 PF01134 Glucose inhibited division protein A CJ306_20640 PF01396 Topoisomerase DNA binding C4 zinc finger CJ306_20640 PF01751 Toprim domain CJ306_20640 PF01131 DNA topoisomerase CJ306_20645 PF02481 DNA recombination-mediator protein A CJ306_20650 PF00549 CoA-ligase CJ306_20650 PF02629 CoA binding domain CJ306_20655 PF08442 ATP-grasp domain CJ306_20655 PF00549 CoA-ligase CJ306_20660 PF01351 Ribonuclease HII CJ306_20665 PF01926 50S ribosome-binding GTPase CJ306_20670 PF10502 Signal peptidase, peptidase S26 CJ306_20675 PF01245 Ribosomal protein L19 CJ306_20680 PF01746 tRNA (Guanine-1)-methyltransferase CJ306_20685 PF05239 PRC-barrel domain CJ306_20685 PF01782 RimM N-terminal domain CJ306_20695 PF00886 Ribosomal protein S16 CJ306_20700 PF02881 SRP54-type protein, helical bundle domain CJ306_20700 PF02978 Signal peptide binding domain CJ306_20700 PF00448 SRP54-type protein, GTPase domain CJ306_20705 PF04297 Putative helix-turn-helix protein, YlxM / p13 like CJ306_20710 PF00448 SRP54-type protein, GTPase domain CJ306_20710 PF02881 SRP54-type protein, helical bundle domain CJ306_20715 PF06470 SMC proteins Flexible Hinge Domain CJ306_20715 PF02463 RecF/RecN/SMC N terminal domain CJ306_20720 PF14622 Ribonuclease-III-like CJ306_20720 PF00035 Double-stranded RNA binding motif CJ306_20725 PF00550 Phosphopantetheine attachment site CJ306_20735 PF00698 Acyl transferase domain CJ306_20740 PF02504 Fatty acid synthesis protein CJ306_20745 PF03061 Thioesterase superfamily CJ306_20750 PF00271 Helicase conserved C-terminal domain CJ306_20750 PF00270 DEAD/DEAH box helicase CJ306_20750 PF17191 RecG wedge domain CJ306_20755 PF02734 DAK2 domain CJ306_20755 PF13684 Dihydroxyacetone kinase family CJ306_20760 PF03780 Asp23 family, cell envelope-related function CJ306_20765 PF00830 Ribosomal L28 family CJ306_20770 PF08183 Stage V sporulation protein family CJ306_20775 PF04263 Thiamin pyrophosphokinase, catalytic domain CJ306_20775 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain CJ306_20780 PF00834 Ribulose-phosphate 3 epimerase family CJ306_20785 PF16745 RsgA N-terminal domain CJ306_20785 PF03193 RsgA GTPase CJ306_20790 PF03793 PASTA domain CJ306_20790 PF00069 Protein kinase domain CJ306_20800 PF04055 Radical SAM superfamily CJ306_20805 PF01029 NusB family CJ306_20805 PF01189 16S rRNA methyltransferase RsmB/F CJ306_20810 PF00551 Formyl transferase CJ306_20810 PF02911 Formyl transferase, C-terminal domain CJ306_20815 PF01327 Polypeptide deformylase CJ306_20820 PF04851 Type III restriction enzyme, res subunit CJ306_20820 PF17764 3′ DNA-binding domain (3′BD) CJ306_20820 PF18074 Primosomal protein N C-terminal domain CJ306_20820 PF18319 PriA DNA helicase Cys-rich region (CRR) domain CJ306_20820 PF00271 Helicase conserved C-terminal domain CJ306_20825 PF04127 DNA / pantothenate metabolism flavoprotein CJ306_20825 PF02441 Flavoprotein CJ306_20830 PF01192 RNA polymerase Rpb6 CJ306_20835 PF00625 Guanylate kinase CJ306_20840 PF04025 Domain of unknown function (DUF370) CJ306_20845 PF03755 YicC-like family, N-terminal region CJ306_20845 PF08340 Domain of unknown function (DUF1732) CJ306_20850 PF00690 Cation transporter/ATPase, N-terminus CJ306_20850 PF00689 Cation transporting ATPase, C-terminus CJ306_20865 PF01321 Creatinase/Prolidase N-terminal domain CJ306_20865 PF00557 Metallopeptidase family M24 CJ306_20900 PF00156 Phosphoribosyl transferase domain CJ306_20905 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CJ306_20910 PF01180 Dihydroorotate dehydrogenase CJ306_20915 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B CJ306_20920 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CJ306_20920 PF02142 MGS-like domain CJ306_20920 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CJ306_20925 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CJ306_20925 PF00117 Glutamine amidotransferase class-I CJ306_20930 PF01979 Amidohydrolase family CJ306_20935 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CJ306_20935 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CJ306_20940 PF00860 Permease family CJ306_20945 PF00156 Phosphoribosyl transferase domain CJ306_20950 PF01479 S4 domain CJ306_20950 PF00849 RNA pseudouridylate synthase CJ306_20955 PF01252 Signal peptidase (SPase) II CJ306_20965 PF08264 Anticodon-binding domain of tRNA CJ306_20965 PF00133 tRNA synthetases class I (I, L, M and V) CJ306_20965 PF06827 Zinc finger found in FPG and IleRS CJ306_20970 PF05103 DivIVA protein CJ306_20975 PF17774 Putative RNA-binding domain in YlmH CJ306_20975 PF01479 S4 domain CJ306_20980 PF02325 YGGT family CJ306_20985 PF04472 Cell division protein SepF CJ306_20990 PF01168 Alanine racemase, N-terminal domain CJ306_21000 PF05239 PRC-barrel domain CJ306_21005 PF04545 Sigma-70, region 4 CJ306_21005 PF04542 Sigma-70 region 2 CJ306_21005 PF04539 Sigma-70 region 3 CJ306_21010 PF04545 Sigma-70, region 4 CJ306_21010 PF04542 Sigma-70 region 2 CJ306_21015 PF03419 Sporulation factor SpoIIGA CJ306_21020 PF12327 FtsZ family, C-terminal domain CJ306_21020 PF00091 Tubulin/FtsZ family, GTPase domain CJ306_21025 PF02491 SHS2 domain inserted in FTSA CJ306_21030 PF03799 Cell division protein FtsQ CJ306_21030 PF08478 POTRA domain, FtsQ-type CJ306_21035 PF01565 FAD binding domain CJ306_21035 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CJ306_21040 PF04101 Glycosyltransferase family 28 C-terminal domain CJ306_21040 PF03033 Glycosyltransferase family 28 N-terminal domain CJ306_21045 PF01098 Cell cycle protein CJ306_21050 PF02875 Mur ligase family, glutamate ligase domain CJ306_21050 PF08245 Mur ligase middle domain CJ306_21055 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 CJ306_21055 PF00953 Glycosyl transferase family 4 CJ306_21060 PF01225 Mur ligase family, catalytic domain CJ306_21060 PF02875 Mur ligase family, glutamate ligase domain CJ306_21060 PF08245 Mur ligase middle domain CJ306_21065 PF03793 PASTA domain CJ306_21065 PF03717 Penicillin-binding Protein dimerisation domain CJ306_21065 PF00905 Penicillin binding protein transpeptidase domain CJ306_21075 PF04977 Septum formation initiator CJ306_21080 PF01795 MraW methylase family CJ306_21085 PF10079 Bacillithiol biosynthesis BshC CJ306_21090 PF08546 Ketopantoate reductase PanE/ApbA C terminal CJ306_21090 PF02558 Ketopantoate reductase PanE/ApbA CJ306_21095 PF00583 Acetyltransferase (GNAT) family CJ306_21105 PF01783 Ribosomal L32p protein family CJ306_21110 PF02620 Large ribosomal RNA subunit accumulation protein YceD CJ306_21115 PF05636 HIGH Nucleotidyl Transferase CJ306_21120 PF05362 Lon protease (S16) C-terminal proteolytic domain CJ306_21120 PF13180 PDZ domain CJ306_21125 PF01734 Patatin-like phospholipase CJ306_21130 PF07670 Nucleoside recognition CJ306_21135 PF01467 Cytidylyltransferase-like CJ306_21150 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) CJ306_21155 PF06133 Control of competence regulator ComK, YlbF/YmcA CJ306_21160 PF00300 Histidine phosphatase superfamily (branch 1) CJ306_21165 PF14003 YlbE-like protein CJ306_21170 PF14071 Putative coat protein CJ306_21175 PF14504 CAP-associated N-terminal CJ306_21175 PF00188 Cysteine-rich secretory protein family CJ306_21180 PF08868 YugN-like family CJ306_21185 PF00795 Carbon-nitrogen hydrolase CJ306_21190 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) CJ306_21195 PF03626 Prokaryotic Cytochrome C oxidase subunit IV CJ306_21200 PF00510 Cytochrome c oxidase subunit III CJ306_21205 PF00115 Cytochrome C and Quinol oxidase polypeptide I CJ306_21210 PF00034 Cytochrome c CJ306_21210 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CJ306_21210 PF02790 Cytochrome C oxidase subunit II, transmembrane domain CJ306_21215 PF01040 UbiA prenyltransferase family CJ306_21220 PF02628 Cytochrome oxidase assembly protein CJ306_21225 PF00682 HMGL-like CJ306_21225 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CJ306_21225 PF02436 Conserved carboxylase domain CJ306_21225 PF00364 Biotin-requiring enzyme CJ306_21225 PF02785 Biotin carboxylase C-terminal domain CJ306_21225 PF00289 Biotin carboxylase, N-terminal domain CJ306_21235 PF01098 Cell cycle protein CJ306_21240 PF07408 Protein of unknown function (DUF1507) CJ306_21250 PF13638 PIN domain CJ306_21250 PF02562 PhoH-like protein CJ306_21260 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) CJ306_21270 PF14036 YlaH-like protein CJ306_21285 PF00459 Inositol monophosphatase family CJ306_21295 PF06335 Protein of unknown function (DUF1054) CJ306_21300 PF05256 Uncharacterised protein family (UPF0223) CJ306_21305 PF01276 Orn/Lys/Arg decarboxylase, major domain CJ306_21305 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CJ306_21345 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CJ306_21345 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJ306_21350 PF00364 Biotin-requiring enzyme CJ306_21350 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CJ306_21350 PF02817 e3 binding domain CJ306_21355 PF02780 Transketolase, C-terminal domain CJ306_21355 PF02779 Transketolase, pyrimidine binding domain CJ306_21360 PF00676 Dehydrogenase E1 component CJ306_21370 PF01327 Polypeptide deformylase CJ306_21390 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CJ306_21390 PF00753 Metallo-beta-lactamase superfamily CJ306_21390 PF17770 Ribonuclease J C-terminal domain CJ306_21395 PF02080 TrkA-C domain CJ306_21395 PF02254 TrkA-N domain CJ306_21405 PF01546 Peptidase family M20/M25/M40 CJ306_21405 PF07687 Peptidase dimerisation domain CJ306_21410 PF00132 Bacterial transferase hexapeptide (six repeats) CJ306_21410 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal CJ306_21410 PF14602 Hexapeptide repeat of succinyl-transferase CJ306_21415 PF03466 LysR substrate binding domain CJ306_21415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJ306_21430 PF04308 Ribonuclease H-like CJ306_21440 PF08796 Protein of unknown function (DUF1797) CJ306_21455 PF00563 EAL domain CJ306_21455 PF10388 EAL-domain associated signalling protein domain CJ306_21465 PF10518 TAT (twin-arginine translocation) pathway signal sequence CJ306_21465 PF00149 Calcineurin-like phosphoesterase CJ306_21480 PF13089 Polyphosphate kinase N-terminal domain CJ306_21480 PF02503 Polyphosphate kinase middle domain CJ306_21480 PF13090 Polyphosphate kinase C-terminal domain 2 CJ306_21480 PF17941 Polyphosphate kinase C-terminal domain 1 CJ306_21485 PF02541 Ppx/GppA phosphatase family CJ306_21490 PF14177 YkyB-like protein CJ306_21515 PF07690 Major Facilitator Superfamily CJ306_21525 PF01717 Cobalamin-independent synthase, Catalytic domain CJ306_21525 PF08267 Cobalamin-independent synthase, N-terminal domain CJ306_21535 PF14040 Deoxyribonuclease NucA/NucB CJ306_21550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJ306_21550 PF00512 His Kinase A (phospho-acceptor) domain CJ306_21560 PF00155 Aminotransferase class I and II CJ306_21565 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CJ306_21565 PF00356 Bacterial regulatory proteins, lacI family CJ306_21570 PF00528 Binding-protein-dependent transport system inner membrane component CJ306_21575 PF00528 Binding-protein-dependent transport system inner membrane component CJ306_21580 PF13416 Bacterial extracellular solute-binding protein CJ306_21585 PF00128 Alpha amylase, catalytic domain CJ306_21585 PF02903 Alpha amylase, N-terminal ig-like domain CJ306_21585 PF16657 Maltogenic Amylase, C-terminal domain CJ306_21590 PF00128 Alpha amylase, catalytic domain CJ306_21590 PF16657 Maltogenic Amylase, C-terminal domain CJ306_21595 PF00005 ABC transporter CJ306_21595 PF17912 MalK OB fold domain CJ306_21595 PF03459 TOBE domain CJ306_21635 PF00108 Thiolase, N-terminal domain CJ306_21635 PF02803 Thiolase, C-terminal domain CJ306_21670 PF03551 Transcriptional regulator PadR-like family CJ306_21690 PF01636 Phosphotransferase enzyme family CJ306_21695 PF00795 Carbon-nitrogen hydrolase CJ306_21700 PF00155 Aminotransferase class I and II CJ306_21705 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain CJ306_21705 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain CJ306_21715 PF00596 Class II Aldolase and Adducin N-terminal domain CJ306_21720 PF03079 ARD/ARD' family CJ306_21735 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CJ306_21735 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CJ306_21740 PF00144 Beta-lactamase CJ306_21745 PF00990 Diguanylate cyclase, GGDEF domain CJ306_21750 PF00881 Nitroreductase family CJ306_21765 PF05524 PEP-utilising enzyme, N-terminal CJ306_21765 PF00391 PEP-utilising enzyme, mobile domain CJ306_21765 PF02896 PEP-utilising enzyme, TIM barrel domain CJ306_21770 PF00381 PTS HPr component phosphorylation site CJ306_21775 PF02378 Phosphotransferase system, EIIC CJ306_21775 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CJ306_21775 PF00367 phosphotransferase system, EIIB CJ306_21780 PF00874 PRD domain CJ306_21780 PF03123 CAT RNA binding domain CJ306_21795 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CJ306_21800 PF01979 Amidohydrolase family CJ306_21810 PF04079 Segregation and condensation complex subunit ScpB CJ306_21820 PF02616 Segregation and condensation protein ScpA CJ306_21830 PF03745 Domain of unknown function (DUF309) CJ306_21835 PF00583 Acetyltransferase (GNAT) family CJ306_21840 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CJ306_21845 PF06207 Protein of unknown function (DUF1002) CJ306_21855 PF03323 Bacillus/Clostridium GerA spore germination protein CJ306_21860 PF14097 Stage V sporulation protein AE1 CJ306_21865 PF03862 SpoVAC/SpoVAEB sporulation membrane protein CJ306_21870 PF07451 Stage V sporulation protein AD (SpoVAD) CJ306_21875 PF03862 SpoVAC/SpoVAEB sporulation membrane protein CJ306_21880 PF13782 Stage V sporulation protein AB CJ306_21885 PF12164 Stage V sporulation protein AA CJ306_21895 PF00209 Sodium:neurotransmitter symporter family CJ306_21900 PF04545 Sigma-70, region 4 CJ306_21900 PF04539 Sigma-70 region 3 CJ306_21900 PF04542 Sigma-70 region 2 CJ306_21905 PF13581 Histidine kinase-like ATPase domain CJ306_21910 PF01740 STAS domain CJ306_21915 PF07943 Penicillin-binding protein 5, C-terminal domain CJ306_21915 PF00768 D-alanyl-D-alanine carboxypeptidase CJ306_21925 PF00392 Bacterial regulatory proteins, gntR family CJ306_21930 PF00005 ABC transporter CJ306_21950 PF01047 MarR family CJ306_21960 PF00860 Permease family CJ306_21965 PF01544 CorA-like Mg2+ transporter protein CJ306_21970 PF02885 Glycosyl transferase family, helical bundle domain CJ306_21970 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain CJ306_21970 PF00591 Glycosyl transferase family, a/b domain CJ306_21975 PF01048 Phosphorylase superfamily CJ306_21980 PF01676 Metalloenzyme superfamily CJ306_21985 PF13115 YtkA-like CJ306_21990 PF00589 Phage integrase family CJ306_21990 PF02899 Phage integrase, N-terminal SAM-like domain CJ306_21995 PF14004 Protein of unknown function (DUF4227) CJ306_22000 PF01475 Ferric uptake regulator family CJ306_22005 PF01944 Stage II sporulation protein M CJ306_22015 PF00293 NUDIX domain CJ306_22020 PF13072 Mother cell inhibitor of FtsZ CJ306_22025 PF00248 Aldo/keto reductase family CJ306_22030 PF00248 Aldo/keto reductase family CJ306_22035 PF13673 Acetyltransferase (GNAT) domain CJ306_22035 PF04229 GrpB protein CJ306_22045 PF00565 Staphylococcal nuclease homologue CJ306_22045 PF00149 Calcineurin-like phosphoesterase CJ306_22045 PF00746 LPXTG cell wall anchor motif CJ306_22045 PF02872 5'-nucleotidase, C-terminal domain CJ306_22055 PF12146 Serine aminopeptidase, S33 CJ306_22060 PF03553 Na+/H+ antiporter family CJ306_22060 PF13726 Na+-H+ antiporter family CJ306_22065 PF00356 Bacterial regulatory proteins, lacI family CJ306_22070 PF00583 Acetyltransferase (GNAT) family CJ306_22075 PF12146 Serine aminopeptidase, S33 CJ306_22080 PF10827 Protein of unknown function (DUF2552) CJ306_22090 PF01872 RibD C-terminal domain CJ306_22090 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CJ306_22095 PF00677 Lumazine binding domain CJ306_22100 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CJ306_22100 PF00925 GTP cyclohydrolase II CJ306_22105 PF00885 6,7-dimethyl-8-ribityllumazine synthase CJ306_22115 PF04055 Radical SAM superfamily CJ306_22115 PF06968 Biotin and Thiamin Synthesis associated domain CJ306_22120 PF13847 Methyltransferase domain CJ306_22125 PF12697 Alpha/beta hydrolase family CJ306_22125 PF08241 Methyltransferase domain CJ306_22130 PF00155 Aminotransferase class I and II CJ306_22140 PF00202 Aminotransferase class-III CJ306_22160 PF00149 Calcineurin-like phosphoesterase CJ306_22160 PF02872 5'-nucleotidase, C-terminal domain CJ306_22170 PF13404 AsnC-type helix-turn-helix domain CJ306_22170 PF01037 Lrp/AsnC ligand binding domain CJ306_22185 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CJ306_22185 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CJ306_22190 PF00202 Aminotransferase class-III CJ306_22195 PF00696 Amino acid kinase family CJ306_22200 PF01960 ArgJ family CJ306_22205 PF01118 Semialdehyde dehydrogenase, NAD binding domain CJ306_22205 PF02774 Semialdehyde dehydrogenase, dimerisation domain CJ306_22215 PF00106 short chain dehydrogenase CJ306_22220 PF00753 Metallo-beta-lactamase superfamily CJ306_22225 PF14748 Pyrroline-5-carboxylate reductase dimerisation CJ306_22225 PF03807 NADP oxidoreductase coenzyme F420-dependent CJ306_22230 PF03313 Serine dehydratase alpha chain CJ306_22235 PF03315 Serine dehydratase beta chain CJ306_22235 PF01842 ACT domain CJ306_22250 PF12706 Beta-lactamase superfamily domain CJ306_22250 PF00753 Metallo-beta-lactamase superfamily CJ306_22265 PF00689 Cation transporting ATPase, C-terminus CJ306_22265 PF00690 Cation transporter/ATPase, N-terminus CJ306_22270 PF02308 MgtC family CJ306_22275 PF00817 impB/mucB/samB family CJ306_22275 PF11799 impB/mucB/samB family C-terminal domain CJ306_22275 PF11798 IMS family HHH motif CJ306_22280 PF07687 Peptidase dimerisation domain CJ306_22280 PF01546 Peptidase family M20/M25/M40 CJ306_22285 PF13302 Acetyltransferase (GNAT) domain CJ306_22300 PF03734 L,D-transpeptidase catalytic domain CJ306_22305 PF06081 Aromatic acid exporter family member 1 CJ306_22305 PF11728 Putative aromatic acid exporter C-terminal domain CJ306_22310 PF00005 ABC transporter CJ306_22315 PF00528 Binding-protein-dependent transport system inner membrane component CJ306_22320 PF00497 Bacterial extracellular solute-binding proteins, family 3 CJ306_22325 PF06491 Disulphide isomerase CJ306_22330 PF11208 Protein of unknown function (DUF2992) CJ306_22335 PF00293 NUDIX domain CJ306_22335 PF09297 NADH pyrophosphatase zinc ribbon domain CJ306_22345 PF01098 Cell cycle protein CJ306_22355 PF00364 Biotin-requiring enzyme CJ306_22355 PF02817 e3 binding domain CJ306_22355 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CJ306_22360 PF02780 Transketolase, C-terminal domain CJ306_22360 PF02779 Transketolase, pyrimidine binding domain CJ306_22365 PF00676 Dehydrogenase E1 component CJ306_22370 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CJ306_22370 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJ306_22375 PF00871 Acetokinase family CJ306_22380 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CJ306_22380 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CJ306_22385 PF01515 Phosphate acetyl/butaryl transferase CJ306_22395 PF02954 Bacterial regulatory protein, Fis family CJ306_22395 PF00158 Sigma-54 interaction domain CJ306_22395 PF00989 PAS fold CJ306_22405 PF03009 Glycerophosphoryl diester phosphodiesterase family CJ306_22410 PF14174 YycC-like protein CJ306_22420 PF08769 Sporulation initiation factor Spo0A C terminal CJ306_22420 PF00072 Response regulator receiver domain CJ306_22430 PF17820 PDZ domain CJ306_22430 PF05580 SpoIVB peptidase S55 CJ306_22435 PF13476 AAA domain CJ306_22440 PF01316 Arginine repressor, DNA binding domain CJ306_22440 PF02863 Arginine repressor, C-terminal domain CJ306_22445 PF01479 S4 domain CJ306_22445 PF01728 FtsJ-like methyltransferase CJ306_22450 PF02779 Transketolase, pyrimidine binding domain CJ306_22450 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CJ306_22450 PF02780 Transketolase, C-terminal domain CJ306_22455 PF00348 Polyprenyl synthetase CJ306_22460 PF02609 Exonuclease VII small subunit CJ306_22465 PF02601 Exonuclease VII, large subunit CJ306_22465 PF13742 OB-fold nucleic acid binding domain CJ306_22470 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CJ306_22470 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CJ306_22475 PF01029 NusB family CJ306_22480 PF03780 Asp23 family, cell envelope-related function CJ306_22485 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CJ306_22485 PF00289 Biotin carboxylase, N-terminal domain CJ306_22485 PF02785 Biotin carboxylase C-terminal domain CJ306_22490 PF00364 Biotin-requiring enzyme CJ306_22500 PF12685 SpoIIIAH-like protein CJ306_22510 PF09581 Stage III sporulation protein AF (Spore_III_AF) CJ306_22515 PF09546 Stage III sporulation protein AE (spore_III_AE) CJ306_22520 PF06686 Stage III sporulation protein AC/AD protein family CJ306_22525 PF06686 Stage III sporulation protein AC/AD protein family CJ306_22530 PF09548 Stage III sporulation protein AB (spore_III_AB) CJ306_22555 PF09285 Elongation factor P, C-terminal CJ306_22555 PF08207 Elongation factor P (EF-P) KOW-like domain CJ306_22555 PF01132 Elongation factor P (EF-P) OB domain CJ306_22560 PF00557 Metallopeptidase family M24 CJ306_22560 PF01321 Creatinase/Prolidase N-terminal domain CJ306_22565 PF01220 Dehydroquinase class II CJ306_22570 PF11085 Conserved membrane protein YqhR CJ306_22575 PF07136 Protein of unknown function (DUF1385) CJ306_22585 PF13419 Haloacid dehalogenase-like hydrolase CJ306_22590 PF01325 Iron dependent repressor, N-terminal DNA binding domain CJ306_22590 PF02742 Iron dependent repressor, metal binding and dimerisation domain CJ306_22615 PF03099 Biotin/lipoate A/B protein ligase family CJ306_22620 PF00581 Rhodanese-like domain CJ306_22630 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CJ306_22630 PF00356 Bacterial regulatory proteins, lacI family CJ306_22640 PF00893 Small Multidrug Resistance protein CJ306_22645 PF00893 Small Multidrug Resistance protein CJ306_22675 PF02347 Glycine cleavage system P-protein CJ306_22680 PF02347 Glycine cleavage system P-protein CJ306_22685 PF02347 Glycine cleavage system P-protein CJ306_22690 PF08669 Glycine cleavage T-protein C-terminal barrel domain CJ306_22690 PF01571 Aminomethyltransferase folate-binding domain CJ306_22695 PF00271 Helicase conserved C-terminal domain CJ306_22695 PF00176 SNF2 family N-terminal domain CJ306_22700 PF11079 Bacterial protein YqhG of unknown function CJ306_22725 PF14038 YqzE-like protein CJ306_22730 PF01202 Shikimate kinase CJ306_22765 PF00482 Type II secretion system (T2SS), protein F CJ306_22770 PF00437 Type II/IV secretion system protein CJ306_22780 PF11117 Protein of unknown function (DUF2626) CJ306_22785 PF00375 Sodium:dicarboxylate symporter family CJ306_22820 PF03033 Glycosyltransferase family 28 N-terminal domain CJ306_22820 PF04101 Glycosyltransferase family 28 C-terminal domain CJ306_22825 PF02607 B12 binding domain CJ306_22825 PF02965 Vitamin B12 dependent methionine synthase, activation domain CJ306_22825 PF00809 Pterin binding enzyme CJ306_22825 PF02574 Homocysteine S-methyltransferase CJ306_22825 PF02310 B12 binding domain CJ306_22830 PF02219 Methylenetetrahydrofolate reductase CJ306_22830 PF02574 Homocysteine S-methyltransferase CJ306_22835 PF01053 Cys/Met metabolism PLP-dependent enzyme CJ306_22840 PF01053 Cys/Met metabolism PLP-dependent enzyme CJ306_22850 PF01022 Bacterial regulatory protein, arsR family CJ306_22860 PF00753 Metallo-beta-lactamase superfamily CJ306_22865 PF10958 Protein of unknown function (DUF2759) CJ306_22870 PF00480 ROK family CJ306_22875 PF06014 Bacterial protein of unknown function (DUF910) CJ306_22880 PF01812 5-formyltetrahydrofolate cyclo-ligase family CJ306_22885 PF00471 Ribosomal protein L33 CJ306_22890 PF00483 Nucleotidyl transferase CJ306_22895 PF01895 PhoU domain CJ306_22900 PF00005 ABC transporter CJ306_22905 PF00528 Binding-protein-dependent transport system inner membrane component CJ306_22910 PF00528 Binding-protein-dependent transport system inner membrane component CJ306_22915 PF12849 PBP superfamily domain CJ306_22925 PF07690 Major Facilitator Superfamily CJ306_22930 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CJ306_22930 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CJ306_22940 PF06691 Protein of unknown function (DUF1189) CJ306_22950 PF04551 GcpE protein CJ306_22955 PF01475 Ferric uptake regulator family CJ306_22960 PF00950 ABC 3 transport family CJ306_22965 PF00005 ABC transporter CJ306_22970 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CJ306_22970 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CJ306_22975 PF11116 Protein of unknown function (DUF2624) CJ306_22980 PF01261 Xylose isomerase-like TIM barrel CJ306_22985 PF00270 DEAD/DEAH box helicase CJ306_22985 PF00271 Helicase conserved C-terminal domain CJ306_22995 PF02401 LytB protein CJ306_23000 PF01784 NIF3 (NGG1p interacting factor 3) CJ306_23005 PF04816 tRNA (adenine(22)-N(1))-methyltransferase CJ306_23010 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CJ306_23015 PF04539 Sigma-70 region 3 CJ306_23015 PF04542 Sigma-70 region 2 CJ306_23015 PF03979 Sigma-70 factor, region 1.1 CJ306_23015 PF04545 Sigma-70, region 4 CJ306_23015 PF00140 Sigma-70 factor, region 1.2 CJ306_23020 PF01807 CHC2 zinc finger CJ306_23020 PF10410 DnaB-helicase binding domain of primase CJ306_23020 PF08275 DNA primase catalytic core, N-terminal domain CJ306_23035 PF03618 Kinase/pyrophosphorylase CJ306_23040 PF08279 HTH domain CJ306_23040 PF00571 CBS domain CJ306_23045 PF02565 Recombination protein O C terminal CJ306_23045 PF11967 Recombination protein O N terminal CJ306_23055 PF07650 KH domain CJ306_23055 PF01926 50S ribosome-binding GTPase CJ306_23060 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CJ306_23065 PF01219 Prokaryotic diacylglycerol kinase CJ306_23070 PF02130 Uncharacterized protein family UPF0054 CJ306_23075 PF01966 HD domain CJ306_23075 PF07697 7TM-HD extracellular CJ306_23075 PF07698 7TM receptor with intracellular HD hydrolase CJ306_23080 PF02562 PhoH-like protein CJ306_23085 PF06898 Putative stage IV sporulation protein YqfD CJ306_23090 PF07873 YabP family CJ306_23100 PF09424 Yqey-like protein CJ306_23105 PF01165 Ribosomal protein S21 CJ306_23115 PF04055 Radical SAM superfamily CJ306_23115 PF00919 Uncharacterized protein family UPF0004 CJ306_23115 PF01938 TRAM domain CJ306_23120 PF04452 RNA methyltransferase CJ306_23130 PF00226 DnaJ domain CJ306_23130 PF00684 DnaJ central domain CJ306_23130 PF01556 DnaJ C terminal domain CJ306_23135 PF00012 Hsp70 protein CJ306_23140 PF01025 GrpE CJ306_23145 PF01628 HrcA protein C terminal domain CJ306_23150 PF06969 HemN C-terminal domain CJ306_23150 PF04055 Radical SAM superfamily CJ306_23155 PF01638 HxlR-like helix-turn-helix CJ306_23160 PF06421 GTP-binding protein LepA C-terminus CJ306_23160 PF00679 Elongation factor G C-terminus CJ306_23160 PF00009 Elongation factor Tu GTP binding domain CJ306_23160 PF03144 Elongation factor Tu domain 2 CJ306_23170 PF03418 Germination protease CJ306_23175 PF01649 Ribosomal protein S20 CJ306_23180 PF06144 DNA polymerase III, delta subunit CJ306_23185 PF14141 YqzM-like protein CJ306_23190 PF03772 Competence protein CJ306_23190 PF13567 Domain of unknown function (DUF4131) CJ306_23190 PF00753 Metallo-beta-lactamase superfamily CJ306_23195 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CJ306_23200 PF10531 SLBB domain CJ306_23205 PF03807 NADP oxidoreductase coenzyme F420-dependent CJ306_23205 PF14748 Pyrroline-5-carboxylate reductase dimerisation CJ306_23210 PF13649 Methyltransferase domain CJ306_23220 PF01966 HD domain CJ306_23225 PF01467 Cytidylyltransferase-like CJ306_23230 PF01985 CRS1 / YhbY (CRM) domain CJ306_23235 PF01488 Shikimate / quinate 5-dehydrogenase CJ306_23235 PF08501 Shikimate dehydrogenase substrate binding domain CJ306_23235 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CJ306_23240 PF01926 50S ribosome-binding GTPase CJ306_23255 PF02666 Phosphatidylserine decarboxylase CJ306_23260 PF04542 Sigma-70 region 2 CJ306_23260 PF04545 Sigma-70, region 4 CJ306_23275 PF00471 Ribosomal protein L33 CJ306_23280 PF00881 Nitroreductase family CJ306_23285 PF04607 Region found in RelA / SpoT proteins CJ306_23295 PF00245 Alkaline phosphatase CJ306_23300 PF00583 Acetyltransferase (GNAT) family CJ306_23305 PF00561 alpha/beta hydrolase fold CJ306_23305 PF08386 TAP-like protein CJ306_23340 PF02225 PA domain CJ306_23340 PF05922 Peptidase inhibitor I9 CJ306_23340 PF13860 FlgD Ig-like domain CJ306_23340 PF00082 Subtilase family CJ306_23350 PF00351 Biopterin-dependent aromatic amino acid hydroxylase CJ306_23360 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CJ306_23365 PF07681 DoxX CJ306_23395 PF00005 ABC transporter CJ306_23400 PF01032 FecCD transport family CJ306_23405 PF01497 Periplasmic binding protein CJ306_23415 PF14143 YrhC-like protein CJ306_23420 PF00465 Iron-containing alcohol dehydrogenase CJ306_23420 PF00171 Aldehyde dehydrogenase family CJ306_23425 PF01053 Cys/Met metabolism PLP-dependent enzyme CJ306_23430 PF00291 Pyridoxal-phosphate dependent enzyme CJ306_23435 PF01048 Phosphorylase superfamily CJ306_23440 PF08241 Methyltransferase domain CJ306_23455 PF03717 Penicillin-binding Protein dimerisation domain CJ306_23455 PF00905 Penicillin binding protein transpeptidase domain CJ306_23465 PF01272 Transcription elongation factor, GreA/GreB, C-term CJ306_23465 PF03449 Transcription elongation factor, N-terminal CJ306_23470 PF00485 Phosphoribulokinase / Uridine kinase family CJ306_23490 PF02618 YceG-like family CJ306_23495 PF06949 Protein of unknown function (DUF1292) CJ306_23500 PF03652 Holliday junction resolvase CJ306_23505 PF06135 IreB regulatory phosphoprotein CJ306_23510 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CJ306_23510 PF01411 tRNA synthetases class II (A) CJ306_23510 PF02272 DHHA1 domain CJ306_23520 PF01594 AI-2E family transporter CJ306_23540 PF14490 Helix-hairpin-helix containing domain CJ306_23540 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain CJ306_23540 PF13538 UvrD-like helicase C-terminal domain CJ306_23555 PF00266 Aminotransferase class-V CJ306_23560 PF02082 Transcriptional regulator CJ306_23565 PF12002 MgsA AAA+ ATPase C terminal CJ306_23565 PF16193 AAA C-terminal domain CJ306_23565 PF05496 Holliday junction DNA helicase RuvB P-loop domain CJ306_23585 PF00899 ThiF family CJ306_23590 PF01336 OB-fold nucleic acid binding domain CJ306_23590 PF00152 tRNA synthetases class II (D, K and N) CJ306_23590 PF02938 GAD domain CJ306_23595 PF03129 Anticodon binding domain CJ306_23595 PF13393 Histidyl-tRNA synthetase CJ306_23605 PF02580 D-Tyr-tRNA(Tyr) deacylase CJ306_23610 PF04607 Region found in RelA / SpoT proteins CJ306_23610 PF13291 ACT domain CJ306_23610 PF02824 TGS domain CJ306_23615 PF00156 Phosphoribosyl transferase domain CJ306_23620 PF02272 DHHA1 domain CJ306_23620 PF01368 DHH family CJ306_23620 PF17768 RecJ OB domain CJ306_23620 PF10141 Single-strand DNA-specific exonuclease, C terminal domain CJ306_23625 PF01545 Cation efflux family CJ306_23625 PF16916 Dimerisation domain of Zinc Transporter CJ306_23630 PF02355 Protein export membrane protein CJ306_23630 PF07549 SecD/SecF GG Motif CJ306_23635 PF13797 Post-transcriptional regulator CJ306_23640 PF14667 Polysaccharide biosynthesis C-terminal domain CJ306_23640 PF01943 Polysaccharide biosynthesis protein CJ306_23645 PF04239 Protein of unknown function (DUF421) CJ306_23655 PF02699 Preprotein translocase subunit CJ306_23660 PF01702 Queuine tRNA-ribosyltransferase CJ306_23665 PF02547 Queuosine biosynthesis protein CJ306_23670 PF11146 Protein of unknown function (DUF2905) CJ306_23675 PF17864 RuvB AAA lid domain CJ306_23675 PF05491 RuvB C-terminal winged helix domain CJ306_23675 PF05496 Holliday junction DNA helicase RuvB P-loop domain CJ306_23680 PF07499 RuvA, C-terminal domain CJ306_23680 PF01330 RuvA N terminal domain CJ306_23685 PF01497 Periplasmic binding protein CJ306_23705 PF01476 LysM domain CJ306_23710 PF02445 Quinolinate synthetase A protein CJ306_23715 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CJ306_23715 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain CJ306_23720 PF00890 FAD binding domain CJ306_23720 PF02910 Fumarate reductase flavoprotein C-term CJ306_23725 PF00266 Aminotransferase class-V CJ306_23730 PF02829 3H domain CJ306_23730 PF08279 HTH domain CJ306_23735 PF03475 3-alpha domain CJ306_23735 PF03473 MOSC domain CJ306_23765 PF00800 Prephenate dehydratase CJ306_23765 PF01842 ACT domain CJ306_23770 PF02687 FtsX-like permease family CJ306_23775 PF02687 FtsX-like permease family CJ306_23780 PF00005 ABC transporter CJ306_23785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJ306_23790 PF00486 Transcriptional regulatory protein, C terminal CJ306_23790 PF00072 Response regulator receiver domain CJ306_23795 PF09269 Domain of unknown function (DUF1967) CJ306_23795 PF01926 50S ribosome-binding GTPase CJ306_23795 PF01018 GTP1/OBG CJ306_23800 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain CJ306_23800 PF14682 Sporulation initiation phospho-transferase B, C-terminal CJ306_23805 PF01016 Ribosomal L27 protein CJ306_23810 PF04327 Cysteine protease Prp CJ306_23815 PF00829 Ribosomal prokaryotic L21 protein CJ306_23820 PF10150 Ribonuclease E/G family CJ306_23820 PF00575 S1 RNA binding domain CJ306_23825 PF02163 Peptidase family M50 CJ306_23830 PF01551 Peptidase family M23 CJ306_23835 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CJ306_23840 PF03775 Septum formation inhibitor MinC, C-terminal domain CJ306_23850 PF04085 rod shape-determining protein MreC CJ306_23860 PF04002 RadC-like JAB domain CJ306_23865 PF02545 Maf-like protein CJ306_23875 PF08245 Mur ligase middle domain CJ306_23875 PF02875 Mur ligase family, glutamate ligase domain CJ306_23880 PF08264 Anticodon-binding domain of tRNA CJ306_23880 PF00133 tRNA synthetases class I (I, L, M and V) CJ306_23880 PF10458 Valyl tRNA synthetase tRNA binding arm CJ306_23890 PF01476 LysM domain CJ306_23895 PF00202 Aminotransferase class-III CJ306_23900 PF00490 Delta-aminolevulinic acid dehydratase CJ306_23905 PF02602 Uroporphyrinogen-III synthase HemD CJ306_23910 PF03900 Porphobilinogen deaminase, C-terminal domain CJ306_23910 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain CJ306_23915 PF01578 Cytochrome C assembly protein CJ306_23920 PF01488 Shikimate / quinate 5-dehydrogenase CJ306_23920 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain CJ306_23920 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain CJ306_23925 PF01047 MarR family CJ306_23930 PF02566 OsmC-like protein CJ306_23935 PF01926 50S ribosome-binding GTPase CJ306_23940 PF02190 ATP-dependent protease La (LON) substrate-binding domain CJ306_23940 PF00004 ATPase family associated with various cellular activities (AAA) CJ306_23940 PF05362 Lon protease (S16) C-terminal proteolytic domain CJ306_23945 PF05362 Lon protease (S16) C-terminal proteolytic domain CJ306_23945 PF00004 ATPase family associated with various cellular activities (AAA) CJ306_23950 PF07724 AAA domain (Cdc48 subfamily) CJ306_23950 PF10431 C-terminal, D2-small domain, of ClpB protein CJ306_23950 PF06689 ClpX C4-type zinc finger CJ306_23955 PF05697 Bacterial trigger factor protein (TF) CJ306_23955 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CJ306_23955 PF05698 Bacterial trigger factor protein (TF) C-terminus CJ306_23975 PF08000 Bacterial PH domain CJ306_23975 PF11724 YvbH-like oligomerisation region CJ306_23985 PF13181 Tetratricopeptide repeat CJ306_23985 PF18801 response regulator aspartate phosphatase H, N terminal CJ306_24020 PF12850 Calcineurin-like phosphoesterase superfamily domain CJ306_24025 PF01725 Ham1 family CJ306_24030 PF01138 3' exoribonuclease family, domain 1 CJ306_24030 PF03725 3' exoribonuclease family, domain 2 CJ306_24035 PF10646 Sporulation and spore germination CJ306_24040 PF01177 Asp/Glu/Hydantoin racemase CJ306_24045 PF07690 Major Facilitator Superfamily CJ306_24055 PF00440 Bacterial regulatory proteins, tetR family CJ306_24065 PF00196 Bacterial regulatory proteins, luxR family CJ306_24070 PF00860 Permease family CJ306_24075 PF07969 Amidohydrolase family CJ306_24080 PF04024 PspC domain CJ306_24085 PF01381 Helix-turn-helix CJ306_24085 PF07883 Cupin domain CJ306_24090 PF13536 Putative multidrug resistance efflux transporter CJ306_24095 PF00230 Major intrinsic protein CJ306_24100 PF02082 Transcriptional regulator CJ306_24110 PF13732 Domain of unknown function (DUF4162) CJ306_24110 PF00005 ABC transporter CJ306_24115 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) CJ306_24120 PF13677 Membrane MotB of proton-channel complex MotA/MotB CJ306_24120 PF00691 OmpA family CJ306_24125 PF01618 MotA/TolQ/ExbB proton channel family CJ306_24130 PF02557 D-alanyl-D-alanine carboxypeptidase CJ306_24135 PF03061 Thioesterase superfamily CJ306_24140 PF13085 2Fe-2S iron-sulfur cluster binding domain CJ306_24140 PF13183 4Fe-4S dicluster domain CJ306_24145 PF00890 FAD binding domain CJ306_24145 PF02910 Fumarate reductase flavoprotein C-term CJ306_24150 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CJ306_24155 PF10702 Protein of unknown function (DUF2507) CJ306_24160 PF01541 GIY-YIG catalytic domain CJ306_24160 PF02151 UvrB/uvrC motif CJ306_24160 PF08459 UvrC Helix-hairpin-helix N-terminal CJ306_24165 PF00085 Thioredoxin CJ306_24170 PF00766 Electron transfer flavoprotein FAD-binding domain CJ306_24170 PF01012 Electron transfer flavoprotein domain CJ306_24175 PF01012 Electron transfer flavoprotein domain CJ306_24180 PF00378 Enoyl-CoA hydratase/isomerase CJ306_24185 PF08359 YsiA-like protein, C-terminal region CJ306_24185 PF00440 Bacterial regulatory proteins, tetR family CJ306_24190 PF13193 AMP-binding enzyme C-terminal domain CJ306_24190 PF00501 AMP-binding enzyme CJ306_24205 PF01497 Periplasmic binding protein CJ306_24210 PF01032 FecCD transport family CJ306_24225 PF05163 DinB family CJ306_24255 PF00005 ABC transporter CJ306_24260 PF00512 His Kinase A (phospho-acceptor) domain CJ306_24260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJ306_24265 PF00486 Transcriptional regulatory protein, C terminal CJ306_24265 PF00072 Response regulator receiver domain CJ306_24275 PF09962 Uncharacterized conserved protein (DUF2196) CJ306_24280 PF17785 PUA-like domain CJ306_24280 PF10672 S-adenosylmethionine-dependent methyltransferase CJ306_24290 PF03992 Antibiotic biosynthesis monooxygenase CJ306_24295 PF04203 Sortase domain CJ306_24300 PF00005 ABC transporter CJ306_24305 PF01032 FecCD transport family CJ306_24310 PF01497 Periplasmic binding protein CJ306_24315 PF05031 Iron Transport-associated domain CJ306_24320 PF05031 Iron Transport-associated domain CJ306_24325 PF05031 Iron Transport-associated domain CJ306_24330 PF05525 Branched-chain amino acid transport protein CJ306_24335 PF00849 RNA pseudouridylate synthase CJ306_24335 PF01479 S4 domain CJ306_24345 PF01713 Smr domain CJ306_24345 PF00488 MutS domain V CJ306_24350 PF02811 PHP domain CJ306_24350 PF14716 Helix-hairpin-helix domain CJ306_24350 PF14791 DNA polymerase beta thumb CJ306_24355 PF02674 Colicin V production protein CJ306_24360 PF05164 Cell division protein ZapA CJ306_24365 PF01351 Ribonuclease HII CJ306_24365 PF11858 Domain of unknown function (DUF3378) CJ306_24395 PF01336 OB-fold nucleic acid binding domain CJ306_24395 PF00152 tRNA synthetases class II (D, K and N) CJ306_24400 PF03147 Ferredoxin-fold anticodon binding domain CJ306_24400 PF01588 Putative tRNA binding domain CJ306_24400 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CJ306_24400 PF03484 tRNA synthetase B5 domain CJ306_24400 PF03483 B3/4 domain CJ306_24405 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CJ306_24405 PF01409 tRNA synthetases class II core domain (F) CJ306_24410 PF08032 RNA 2'-O ribose methyltransferase substrate binding CJ306_24410 PF00588 SpoU rRNA Methylase family CJ306_24415 PF14098 Small, acid-soluble spore protein I CJ306_24420 PF01966 HD domain CJ306_24440 PF07690 Major Facilitator Superfamily CJ306_24450 PF16859 Tetracyclin repressor-like, C-terminal domain CJ306_24450 PF00440 Bacterial regulatory proteins, tetR family CJ306_24455 PF05343 M42 glutamyl aminopeptidase CJ306_24465 PF00453 Ribosomal protein L20 CJ306_24470 PF01632 Ribosomal protein L35 CJ306_24475 PF00707 Translation initiation factor IF-3, C-terminal domain CJ306_24475 PF05198 Translation initiation factor IF-3, N-terminal domain CJ306_24480 PF02824 TGS domain CJ306_24480 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CJ306_24480 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CJ306_24480 PF03129 Anticodon binding domain CJ306_24485 PF08812 YtxC-like family CJ306_24490 PF13783 Domain of unknown function (DUF4177) CJ306_24495 PF01695 IstB-like ATP binding protein CJ306_24495 PF07319 Primosomal protein DnaI N-terminus CJ306_24500 PF07261 Replication initiation and membrane attachment CJ306_24505 PF03477 ATP cone domain CJ306_24510 PF02675 S-adenosylmethionine decarboxylase CJ306_24520 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CJ306_24520 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CJ306_24525 PF01121 Dephospho-CoA kinase CJ306_24530 PF02659 Putative manganese efflux pump CJ306_24535 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CJ306_24535 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CJ306_24535 PF06827 Zinc finger found in FPG and IleRS CJ306_24540 PF00476 DNA polymerase family A CJ306_24540 PF01367 5'-3' exonuclease, C-terminal SAM fold CJ306_24540 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CJ306_24545 PF16736 Single Cache-like CJ306_24545 PF00989 PAS fold CJ306_24545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJ306_24545 PF00512 His Kinase A (phospho-acceptor) domain CJ306_24550 PF00072 Response regulator receiver domain CJ306_24550 PF00486 Transcriptional regulatory protein, C terminal CJ306_24570 PF00056 lactate/malate dehydrogenase, NAD binding domain CJ306_24570 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CJ306_24575 PF00180 Isocitrate/isopropylmalate dehydrogenase CJ306_24580 PF00285 Citrate synthase, C-terminal domain CJ306_24590 PF04284 Protein of unknown function (DUF441) CJ306_24595 PF01594 AI-2E family transporter CJ306_24600 PF04186 FxsA cytoplasmic membrane protein CJ306_24605 PF00391 PEP-utilising enzyme, mobile domain CJ306_24605 PF00224 Pyruvate kinase, barrel domain CJ306_24605 PF02887 Pyruvate kinase, alpha/beta domain CJ306_24610 PF00365 Phosphofructokinase CJ306_24615 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CJ306_24620 PF17848 Acetyl-coA carboxylase zinc finger domain CJ306_24620 PF01039 Carboxyl transferase domain CJ306_24625 PF00392 Bacterial regulatory proteins, gntR family CJ306_24630 PF03949 Malic enzyme, NAD binding domain CJ306_24630 PF00390 Malic enzyme, N-terminal domain CJ306_24635 PF01336 OB-fold nucleic acid binding domain CJ306_24635 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CJ306_24635 PF14579 Helix-hairpin-helix motif CJ306_24635 PF02811 PHP domain CJ306_24635 PF07733 Bacterial DNA polymerase III alpha NTPase domain CJ306_24640 PF14034 Sporulation protein YtrH CJ306_24650 PF01368 DHH family CJ306_24650 PF02272 DHHA1 domain CJ306_24655 PF14007 YtpI-like protein CJ306_24665 PF00571 CBS domain CJ306_24665 PF07085 DRTGG domain CJ306_24665 PF00392 Bacterial regulatory proteins, gntR family CJ306_24665 PF03061 Thioesterase superfamily CJ306_24680 PF00557 Metallopeptidase family M24 CJ306_24680 PF01321 Creatinase/Prolidase N-terminal domain CJ306_24720 PF12746 GNAT acetyltransferase CJ306_24725 PF07883 Cupin domain CJ306_24735 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CJ306_24735 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CJ306_24745 PF00582 Universal stress protein family CJ306_24765 PF00206 Lyase CJ306_24765 PF14698 Argininosuccinate lyase C-terminal CJ306_24770 PF00764 Arginosuccinate synthase CJ306_24790 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CJ306_24790 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CJ306_24795 PF12787 EcsC protein family CJ306_24810 PF00871 Acetokinase family CJ306_24815 PF02384 N-6 DNA Methylase CJ306_24820 PF08534 Redoxin CJ306_24825 PF00004 ATPase family associated with various cellular activities (AAA) CJ306_24825 PF17866 AAA lid domain CJ306_24830 PF09579 Sporulation protein YtfJ (Spore_YtfJ) CJ306_24840 PF01513 ATP-NAD kinase CJ306_24845 PF07969 Amidohydrolase family CJ306_24855 PF13193 AMP-binding enzyme C-terminal domain CJ306_24855 PF00501 AMP-binding enzyme CJ306_24860 PF00269 Small, acid-soluble spore proteins, alpha/beta type CJ306_24865 PF02568 Thiamine biosynthesis protein (ThiI) CJ306_24865 PF02926 THUMP domain CJ306_24870 PF00266 Aminotransferase class-V CJ306_24875 PF06160 Septation ring formation regulator, EzrA CJ306_24880 PF03466 LysR substrate binding domain CJ306_24880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJ306_24885 PF00892 EamA-like transporter family CJ306_24890 PF00440 Bacterial regulatory proteins, tetR family CJ306_24895 PF13185 GAF domain CJ306_24900 PF01053 Cys/Met metabolism PLP-dependent enzyme CJ306_24910 PF01479 S4 domain CJ306_24910 PF00163 Ribosomal protein S4/S9 N-terminal domain CJ306_24950 PF00579 tRNA synthetases class I (W and Y) CJ306_24950 PF01479 S4 domain CJ306_24960 PF08281 Sigma-70, region 4 CJ306_24960 PF04542 Sigma-70 region 2 CJ306_24970 PF14602 Hexapeptide repeat of succinyl-transferase CJ306_24970 PF12464 Maltose acetyltransferase CJ306_24975 PF00501 AMP-binding enzyme CJ306_24975 PF13193 AMP-binding enzyme C-terminal domain CJ306_24980 PF00583 Acetyltransferase (GNAT) family CJ306_24985 PF00571 CBS domain CJ306_24990 PF00850 Histone deacetylase domain CJ306_25005 PF00072 Response regulator receiver domain CJ306_25005 PF00486 Transcriptional regulatory protein, C terminal CJ306_25010 PF00672 HAMP domain CJ306_25010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJ306_25010 PF13426 PAS domain CJ306_25010 PF00512 His Kinase A (phospho-acceptor) domain CJ306_25015 PF12796 Ankyrin repeats (3 copies) CJ306_25020 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CJ306_25025 PF01741 Large-conductance mechanosensitive channel, MscL CJ306_25050 PF00356 Bacterial regulatory proteins, lacI family CJ306_25065 PF01817 Chorismate mutase type II CJ306_25065 PF00793 DAHP synthetase I family CJ306_25070 PF07537 CamS sex pheromone cAM373 precursor CJ306_25075 PF11009 Protein of unknown function (DUF2847) CJ306_25085 PF02073 Thermophilic metalloprotease (M29) CJ306_25110 PF13302 Acetyltransferase (GNAT) domain CJ306_25115 PF01225 Mur ligase family, catalytic domain CJ306_25115 PF08245 Mur ligase middle domain CJ306_25115 PF02875 Mur ligase family, glutamate ligase domain CJ306_25125 PF09397 Ftsk gamma domain CJ306_25125 PF01580 FtsK/SpoIIIE family CJ306_25125 PF17854 FtsK alpha domain CJ306_25130 PF01520 N-acetylmuramoyl-L-alanine amidase CJ306_25145 PF01588 Putative tRNA binding domain CJ306_25145 PF14794 Domain of unknown function (DUF4479) CJ306_25150 PF07285 Protein of unknown function (DUF1444) CJ306_25155 PF00085 Thioredoxin CJ306_25160 PF01931 Protein of unknown function DUF84 CJ306_25165 PF05343 M42 glutamyl aminopeptidase CJ306_25175 PF00753 Metallo-beta-lactamase superfamily CJ306_25180 PF02390 Putative methyltransferase CJ306_25185 PF14165 YtzH-like protein CJ306_25190 PF01636 Phosphotransferase enzyme family CJ306_25195 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CJ306_25195 PF00128 Alpha amylase, catalytic domain CJ306_25195 PF17999 Pullulanase N1-terminal domain CJ306_25205 PF02834 LigT like Phosphoesterase CJ306_25210 PF01546 Peptidase family M20/M25/M40 CJ306_25215 PF08220 DeoR-like helix-turn-helix domain CJ306_25220 PF00849 RNA pseudouridylate synthase CJ306_25220 PF01479 S4 domain CJ306_25225 PF14667 Polysaccharide biosynthesis C-terminal domain CJ306_25225 PF01943 Polysaccharide biosynthesis protein CJ306_25240 PF07690 Major Facilitator Superfamily CJ306_25245 PF01022 Bacterial regulatory protein, arsR family CJ306_25250 PF08327 Activator of Hsp90 ATPase homolog 1-like protein CJ306_25265 PF10957 Sporulation protein Cse60 CJ306_25275 PF02559 CarD-like/TRCF domain CJ306_25285 PF06800 Sugar transport protein CJ306_25300 PF02391 MoaE protein CJ306_25305 PF03205 Molybdopterin guanine dinucleotide synthesis protein B CJ306_25310 PF03453 MoeA N-terminal region (domain I and II) CJ306_25310 PF00994 Probable molybdopterin binding domain CJ306_25310 PF03454 MoeA C-terminal region (domain IV) CJ306_25315 PF01967 MoaC family CJ306_25320 PF00899 ThiF family CJ306_25325 PF04055 Radical SAM superfamily CJ306_25325 PF06463 Molybdenum Cofactor Synthesis C CJ306_25350 PF00581 Rhodanese-like domain CJ306_25360 PF00561 alpha/beta hydrolase fold CJ306_25365 PF03323 Bacillus/Clostridium GerA spore germination protein CJ306_25370 PF03845 Spore germination protein CJ306_25395 PF08264 Anticodon-binding domain of tRNA CJ306_25395 PF00133 tRNA synthetases class I (I, L, M and V) CJ306_25395 PF13603 Leucyl-tRNA synthetase, Domain 2 CJ306_25395 PF09334 tRNA synthetases class I (M) CJ306_25400 PF07690 Major Facilitator Superfamily CJ306_25405 PF00999 Sodium/hydrogen exchanger family CJ306_25410 PF02080 TrkA-C domain CJ306_25415 PF00589 Phage integrase family CJ306_25425 PF00005 ABC transporter CJ306_25430 PF07786 Protein of unknown function (DUF1624) CJ306_25430 PF04235 Protein of unknown function (DUF418) CJ306_25440 PF10732 Protein of unknown function (DUF2524) CJ306_25445 PF16199 Radical_SAM C-terminal domain CJ306_25445 PF04055 Radical SAM superfamily CJ306_25450 PF06962 Putative rRNA methylase CJ306_25455 PF00005 ABC transporter CJ306_25465 PF01177 Asp/Glu/Hydantoin racemase CJ306_25475 PF10026 Predicted Zn-dependent protease (DUF2268) CJ306_25490 PF10776 Protein of unknown function (DUF2600) CJ306_25495 PF12146 Serine aminopeptidase, S33 CJ306_25500 PF00132 Bacterial transferase hexapeptide (six repeats) CJ306_25505 PF01569 PAP2 superfamily CJ306_25510 PF00534 Glycosyl transferases group 1 CJ306_25510 PF13439 Glycosyltransferase Family 4 CJ306_25515 PF12804 MobA-like NTP transferase domain CJ306_25520 PF00994 Probable molybdopterin binding domain CJ306_25535 PF02773 S-adenosylmethionine synthetase, C-terminal domain CJ306_25535 PF02772 S-adenosylmethionine synthetase, central domain CJ306_25535 PF00438 S-adenosylmethionine synthetase, N-terminal domain CJ306_25545 PF01293 Phosphoenolpyruvate carboxykinase CJ306_25580 PF13419 Haloacid dehalogenase-like hydrolase CJ306_25585 PF00455 DeoR C terminal sensor domain CJ306_25585 PF08220 DeoR-like helix-turn-helix domain CJ306_25590 PF13419 Haloacid dehalogenase-like hydrolase CJ306_25600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJ306_25600 PF13188 PAS domain CJ306_25600 PF00512 His Kinase A (phospho-acceptor) domain CJ306_25600 PF00989 PAS fold CJ306_25600 PF13426 PAS domain CJ306_25605 PF02743 Cache domain CJ306_25605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJ306_25605 PF00512 His Kinase A (phospho-acceptor) domain CJ306_25620 PF08386 TAP-like protein CJ306_25620 PF00561 alpha/beta hydrolase fold CJ306_25625 PF00884 Sulfatase CJ306_25650 PF00005 ABC transporter CJ306_25655 PF00528 Binding-protein-dependent transport system inner membrane component CJ306_25670 PF13419 Haloacid dehalogenase-like hydrolase CJ306_25680 PF00293 NUDIX domain CJ306_25715 PF02664 S-Ribosylhomocysteinase (LuxS) CJ306_25720 PF01809 Putative membrane protein insertion efficiency factor CJ306_25725 PF00484 Carbonic anhydrase CJ306_25730 PF07282 Putative transposase DNA-binding domain CJ306_25730 PF12323 Helix-turn-helix domain CJ306_25730 PF01385 Probable transposase CJ306_25735 PF01654 Cytochrome bd terminal oxidase subunit I CJ306_25740 PF02322 Cytochrome bd terminal oxidase subunit II CJ306_25745 PF10676 Spore germination protein gerPA/gerPF CJ306_25755 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CJ306_25755 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CJ306_25780 PF04012 PspA/IM30 family CJ306_25795 PF02421 Ferrous iron transport protein B CJ306_25795 PF17910 FeoB cytosolic helical domain CJ306_25795 PF07670 Nucleoside recognition CJ306_25795 PF07664 Ferrous iron transport protein B C terminus CJ306_25805 PF09515 Thiamine transporter protein (Thia_YuaJ) CJ306_25810 PF00672 HAMP domain CJ306_25810 PF00512 His Kinase A (phospho-acceptor) domain CJ306_25810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJ306_25815 PF00072 Response regulator receiver domain CJ306_25815 PF00486 Transcriptional regulatory protein, C terminal CJ306_25845 PF00781 Diacylglycerol kinase catalytic domain CJ306_25885 PF02687 FtsX-like permease family CJ306_25890 PF00005 ABC transporter CJ306_25900 PF00248 Aldo/keto reductase family CJ306_25915 PF09335 SNARE associated Golgi protein CJ306_25920 PF00398 Ribosomal RNA adenine dimethylase CJ306_25925 PF02687 FtsX-like permease family CJ306_25930 PF00005 ABC transporter CJ306_25935 PF06445 GyrI-like small molecule binding domain CJ306_25935 PF12833 Helix-turn-helix domain CJ306_25945 PF00005 ABC transporter CJ306_25950 PF07853 Protein of unknown function (DUF1648) CJ306_25950 PF13630 SdpI/YhfL protein family CJ306_25955 PF01022 Bacterial regulatory protein, arsR family CJ306_25960 PF00072 Response regulator receiver domain CJ306_25960 PF00486 Transcriptional regulatory protein, C terminal CJ306_25965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJ306_25970 PF02687 FtsX-like permease family CJ306_25975 PF02687 FtsX-like permease family CJ306_25980 PF00005 ABC transporter CJ306_25985 PF02687 FtsX-like permease family CJ306_25995 PF02447 GntP family permease CJ306_26010 PF07071 KDGP aldolase CJ306_26015 PF03841 L-seryl-tRNA selenium transferase CJ306_26020 PF01979 Amidohydrolase family CJ306_26025 PF02557 D-alanyl-D-alanine carboxypeptidase CJ306_26030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJ306_26030 PF00512 His Kinase A (phospho-acceptor) domain CJ306_26035 PF00486 Transcriptional regulatory protein, C terminal CJ306_26035 PF00072 Response regulator receiver domain CJ306_26040 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CJ306_26040 PF13378 Enolase C-terminal domain-like CJ306_26045 PF13193 AMP-binding enzyme C-terminal domain CJ306_26045 PF00501 AMP-binding enzyme CJ306_26050 PF00378 Enoyl-CoA hydratase/isomerase CJ306_26055 PF00561 alpha/beta hydrolase fold CJ306_26060 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CJ306_26060 PF16582 Middle domain of thiamine pyrophosphate CJ306_26060 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CJ306_26065 PF00425 chorismate binding enzyme CJ306_26070 PF01040 UbiA prenyltransferase family CJ306_26075 PF01258 Prokaryotic dksA/traR C4-type zinc finger CJ306_26080 PF00313 'Cold-shock' DNA-binding domain CJ306_26105 PF00343 Carbohydrate phosphorylase CJ306_26110 PF08323 Starch synthase catalytic domain CJ306_26110 PF00534 Glycosyl transferases group 1 CJ306_26115 PF00483 Nucleotidyl transferase CJ306_26120 PF00483 Nucleotidyl transferase CJ306_26125 PF00128 Alpha amylase, catalytic domain CJ306_26125 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CJ306_26125 PF02806 Alpha amylase, C-terminal all-beta domain CJ306_26135 PF13860 FlgD Ig-like domain CJ306_26135 PF00082 Subtilase family CJ306_26135 PF02225 PA domain CJ306_26135 PF05922 Peptidase inhibitor I9 CJ306_26145 PF00056 lactate/malate dehydrogenase, NAD binding domain CJ306_26145 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CJ306_26240 PF05697 Bacterial trigger factor protein (TF) CJ306_26240 PF05698 Bacterial trigger factor protein (TF) C-terminus CJ306_26280 PF02308 MgtC family CJ306_26285 PF02254 TrkA-N domain CJ306_26285 PF07885 Ion channel CJ306_26290 PF08868 YugN-like family CJ306_26295 PF00342 Phosphoglucose isomerase CJ306_26305 PF04070 Domain of unknown function (DUF378) CJ306_26310 PF00575 S1 RNA binding domain CJ306_26315 PF00155 Aminotransferase class I and II CJ306_26320 PF01037 Lrp/AsnC ligand binding domain CJ306_26325 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CJ306_26325 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CJ306_26330 PF00561 alpha/beta hydrolase fold CJ306_26330 PF08386 TAP-like protein CJ306_26340 PF00155 Aminotransferase class I and II CJ306_26350 PF08810 Kinase associated protein B CJ306_26355 PF00929 Exonuclease CJ306_26360 PF03600 Citrate transporter CJ306_26380 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CJ306_26380 PF03129 Anticodon binding domain CJ306_26385 PF03061 Thioesterase superfamily CJ306_26395 PF02632 BioY family CJ306_26405 PF00483 Nucleotidyl transferase CJ306_26410 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CJ306_26410 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CJ306_26410 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CJ306_26410 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CJ306_26415 PF02457 DisA bacterial checkpoint controller nucleotide-binding CJ306_26415 PF10372 Bacterial membrane-spanning protein N-terminus CJ306_26430 PF00892 EamA-like transporter family CJ306_26435 PF01040 UbiA prenyltransferase family CJ306_26440 PF02789 Cytosol aminopeptidase family, N-terminal domain CJ306_26440 PF00883 Cytosol aminopeptidase family, catalytic domain CJ306_26445 PF06725 3D domain CJ306_26455 PF00293 NUDIX domain CJ306_26455 PF13344 Haloacid dehalogenase-like hydrolase CJ306_26460 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJ306_26465 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJ306_26475 PF06445 GyrI-like small molecule binding domain CJ306_26490 PF04463 Protein of unknown function (DUF523) CJ306_26510 PF01521 Iron-sulphur cluster biosynthesis CJ306_26515 PF01678 Diaminopimelate epimerase CJ306_26520 PF07293 Protein of unknown function (DUF1450) CJ306_26525 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJ306_26535 PF03412 Peptidase C39 family CJ306_26535 PF00005 ABC transporter CJ306_26535 PF00664 ABC transporter transmembrane region CJ306_26540 PF03649 Uncharacterised protein family (UPF0014) CJ306_26545 PF08274 PhnA Zinc-Ribbon CJ306_26545 PF03831 PhnA domain CJ306_26590 PF07315 Protein of unknown function (DUF1462) CJ306_26595 PF01106 NifU-like domain CJ306_26615 PF04608 Phosphatidylglycerophosphatase A CJ306_26630 PF02525 Flavodoxin-like fold CJ306_26640 PF13344 Haloacid dehalogenase-like hydrolase CJ306_26650 PF01934 Protein of unknown function DUF86 CJ306_26655 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded CJ306_26680 PF06265 Protein of unknown function (DUF1027) CJ306_26685 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) CJ306_26690 PF13411 MerR HTH family regulatory protein CJ306_26690 PF07739 TipAS antibiotic-recognition domain CJ306_26695 PF10086 YhfC intramembrane metalloprotease CJ306_26720 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family CJ306_26720 PF04055 Radical SAM superfamily CJ306_26725 PF01551 Peptidase family M23 CJ306_26730 PF09560 Sporulation protein YunB (Spo_YunB) CJ306_26735 PF08827 Domain of unknown function (DUF1805) CJ306_26740 PF02872 5'-nucleotidase, C-terminal domain CJ306_26745 PF01458 Uncharacterized protein family (UPF0051) CJ306_26750 PF01592 NifU-like N terminal domain CJ306_26755 PF00266 Aminotransferase class-V CJ306_26760 PF01458 Uncharacterized protein family (UPF0051) CJ306_26765 PF00005 ABC transporter CJ306_26770 PF03180 NLPA lipoprotein CJ306_26775 PF03180 NLPA lipoprotein CJ306_26780 PF00528 Binding-protein-dependent transport system inner membrane component CJ306_26785 PF09383 NIL domain CJ306_26785 PF00005 ABC transporter CJ306_26800 PF00085 Thioredoxin CJ306_26805 PF01751 Toprim domain CJ306_26815 PF01597 Glycine cleavage H-protein CJ306_26820 PF03960 ArsC family CJ306_26840 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CJ306_26840 PF00056 lactate/malate dehydrogenase, NAD binding domain CJ306_26865 PF00440 Bacterial regulatory proteins, tetR family CJ306_26865 PF13305 Tetracyclin repressor-like, C-terminal domain CJ306_26870 PF00753 Metallo-beta-lactamase superfamily CJ306_26875 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CJ306_26875 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CJ306_26875 PF02770 Acyl-CoA dehydrogenase, middle domain CJ306_26885 PF02803 Thiolase, C-terminal domain CJ306_26885 PF00108 Thiolase, N-terminal domain CJ306_26890 PF00378 Enoyl-CoA hydratase/isomerase CJ306_26890 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CJ306_26890 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CJ306_26900 PF14115 YuzL-like protein CJ306_26905 PF07943 Penicillin-binding protein 5, C-terminal domain CJ306_26905 PF00768 D-alanyl-D-alanine carboxypeptidase CJ306_26910 PF01619 Proline dehydrogenase CJ306_26915 PF10835 Protein of unknown function (DUF2573) CJ306_26920 PF01910 Thiamine-binding protein CJ306_26925 PF02743 Cache domain CJ306_26925 PF00672 HAMP domain CJ306_26925 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CJ306_26940 PF07690 Major Facilitator Superfamily CJ306_26945 PF13520 Amino acid permease CJ306_26965 PF02096 60Kd inner membrane protein CJ306_26975 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CJ306_26975 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CJ306_27015 PF09335 SNARE associated Golgi protein CJ306_27025 PF17969 L,D-transpeptidase C-terminal domain CJ306_27025 PF03734 L,D-transpeptidase catalytic domain CJ306_27030 PF00072 Response regulator receiver domain CJ306_27030 PF00486 Transcriptional regulatory protein, C terminal CJ306_27035 PF16736 Single Cache-like CJ306_27035 PF00512 His Kinase A (phospho-acceptor) domain CJ306_27035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJ306_27035 PF00989 PAS fold CJ306_27050 PF09334 tRNA synthetases class I (M) CJ306_27050 PF08264 Anticodon-binding domain of tRNA CJ306_27060 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CJ306_27060 PF02743 Cache domain CJ306_27060 PF00672 HAMP domain CJ306_27065 PF02743 Cache domain CJ306_27065 PF00672 HAMP domain CJ306_27065 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CJ306_27070 PF01883 Iron-sulfur cluster assembly protein CJ306_27075 PF03413 Peptidase propeptide and YPEB domain CJ306_27075 PF02868 Thermolysin metallopeptidase, alpha-helical domain CJ306_27075 PF07504 Fungalysin/Thermolysin Propeptide Motif CJ306_27075 PF01447 Thermolysin metallopeptidase, catalytic domain CJ306_27080 PF17954 Quercetinase C-terminal cupin domain CJ306_27080 PF02678 Pirin CJ306_27085 PF01047 MarR family CJ306_27095 PF00999 Sodium/hydrogen exchanger family CJ306_27100 PF02080 TrkA-C domain CJ306_27110 PF01235 Sodium:alanine symporter family CJ306_27120 PF00210 Ferritin-like domain CJ306_27135 PF03641 Possible lysine decarboxylase CJ306_27145 PF00210 Ferritin-like domain CJ306_27150 PF04235 Protein of unknown function (DUF418) CJ306_27155 PF07662 Na+ dependent nucleoside transporter C-terminus CJ306_27155 PF01773 Na+ dependent nucleoside transporter N-terminus CJ306_27160 PF07662 Na+ dependent nucleoside transporter C-terminus CJ306_27160 PF01773 Na+ dependent nucleoside transporter N-terminus CJ306_27165 PF01235 Sodium:alanine symporter family CJ306_27170 PF01235 Sodium:alanine symporter family CJ306_27175 PF13460 NAD(P)H-binding CJ306_27195 PF00248 Aldo/keto reductase family CJ306_27200 PF07690 Major Facilitator Superfamily CJ306_27205 PF01638 HxlR-like helix-turn-helix CJ306_27210 PF07849 Protein of unknown function (DUF1641) CJ306_27215 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJ306_27220 PF01479 S4 domain CJ306_27220 PF00579 tRNA synthetases class I (W and Y) CJ306_27225 PF01565 FAD binding domain CJ306_27225 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CJ306_27245 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CJ306_27250 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CJ306_27265 PF07690 Major Facilitator Superfamily CJ306_27270 PF00005 ABC transporter CJ306_27270 PF12848 ABC transporter CJ306_27275 PF13302 Acetyltransferase (GNAT) domain CJ306_27280 PF06146 Phosphate-starvation-inducible E CJ306_27310 PF01289 Thiol-activated cytolysin CJ306_27310 PF17440 Thiol-activated cytolysin beta sandwich domain CJ306_27315 PF00005 ABC transporter CJ306_27320 PF01032 FecCD transport family CJ306_27325 PF01032 FecCD transport family CJ306_27335 PF00072 Response regulator receiver domain CJ306_27335 PF00486 Transcriptional regulatory protein, C terminal CJ306_27345 PF01668 SmpB protein CJ306_27350 PF00773 RNB domain CJ306_27350 PF08206 Ribonuclease B OB domain CJ306_27350 PF00575 S1 RNA binding domain CJ306_27350 PF17876 Cold shock domain CJ306_27355 PF12146 Serine aminopeptidase, S33 CJ306_27360 PF03840 Preprotein translocase SecG subunit CJ306_27365 PF04172 LrgB-like family CJ306_27370 PF03788 LrgA family CJ306_27375 PF01156 Inosine-uridine preferring nucleoside hydrolase CJ306_27380 PF00113 Enolase, C-terminal TIM barrel domain CJ306_27380 PF03952 Enolase, N-terminal domain CJ306_27385 PF01676 Metalloenzyme superfamily CJ306_27385 PF06415 BPG-independent PGAM N-terminus (iPGM_N) CJ306_27390 PF00121 Triosephosphate isomerase CJ306_27395 PF00162 Phosphoglycerate kinase CJ306_27400 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CJ306_27400 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CJ306_27405 PF04198 Putative sugar-binding domain CJ306_27415 PF00309 Sigma-54 factor, Activator interacting domain (AID) CJ306_27415 PF04963 Sigma-54 factor, core binding domain CJ306_27415 PF04552 Sigma-54, DNA binding domain CJ306_27430 PF00005 ABC transporter CJ306_27430 PF13732 Domain of unknown function (DUF4162) CJ306_27435 PF07730 Histidine kinase CJ306_27435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJ306_27440 PF00196 Bacterial regulatory proteins, luxR family CJ306_27440 PF00072 Response regulator receiver domain CJ306_27460 PF03862 SpoVAC/SpoVAEB sporulation membrane protein CJ306_27465 PF07451 Stage V sporulation protein AD (SpoVAD) CJ306_27470 PF03862 SpoVAC/SpoVAEB sporulation membrane protein CJ306_27480 PF04239 Protein of unknown function (DUF421) CJ306_27485 PF00574 Clp protease CJ306_27490 PF00381 PTS HPr component phosphorylation site CJ306_27495 PF02650 WhiA C-terminal HTH domain CJ306_27495 PF14527 WhiA LAGLIDADG-like domain CJ306_27495 PF10298 WhiA N-terminal LAGLIDADG-like domain CJ306_27500 PF01933 Uncharacterised protein family UPF0052 CJ306_27505 PF03668 P-loop ATPase protein family CJ306_27510 PF00293 NUDIX domain CJ306_27520 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJ306_27530 PF14602 Hexapeptide repeat of succinyl-transferase CJ306_27535 PF13419 Haloacid dehalogenase-like hydrolase CJ306_27540 PF01790 Prolipoprotein diacylglyceryl transferase CJ306_27545 PF02603 HPr Serine kinase N terminus CJ306_27545 PF07475 HPr Serine kinase C-terminal domain CJ306_27550 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV CJ306_27555 PF17760 UvrA interaction domain CJ306_27555 PF17755 UvrA DNA-binding domain CJ306_27555 PF00005 ABC transporter CJ306_27560 PF12344 Ultra-violet resistance protein B CJ306_27560 PF02151 UvrB/uvrC motif CJ306_27560 PF04851 Type III restriction enzyme, res subunit CJ306_27560 PF00271 Helicase conserved C-terminal domain CJ306_27560 PF17757 UvrB interaction domain CJ306_27575 PF07739 TipAS antibiotic-recognition domain CJ306_27575 PF13411 MerR HTH family regulatory protein CJ306_27590 PF03601 Conserved hypothetical protein 698 CJ306_27595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJ306_27595 PF03466 LysR substrate binding domain CJ306_27600 PF00376 MerR family regulatory protein CJ306_27600 PF09278 MerR, DNA binding CJ306_27605 PF03358 NADPH-dependent FMN reductase CJ306_27615 PF01906 Putative heavy-metal-binding CJ306_27620 PF00005 ABC transporter CJ306_27620 PF00664 ABC transporter transmembrane region CJ306_27630 PF17820 PDZ domain CJ306_27635 PF03572 Peptidase family S41 CJ306_27635 PF01471 Putative peptidoglycan binding domain CJ306_27635 PF17820 PDZ domain CJ306_27640 PF02687 FtsX-like permease family CJ306_27640 PF18075 FtsX extracellular domain CJ306_27645 PF00005 ABC transporter CJ306_27655 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CJ306_27665 PF00472 RF-1 domain CJ306_27665 PF03462 PCRF domain CJ306_27675 PF07516 SecA Wing and Scaffold domain CJ306_27675 PF01043 SecA preprotein cross-linking domain CJ306_27675 PF07517 SecA DEAD-like domain CJ306_27675 PF02810 SEC-C motif CJ306_27685 PF00005 ABC transporter CJ306_27715 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus CJ306_27715 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CJ306_27720 PF00313 'Cold-shock' DNA-binding domain CJ306_27730 PF00271 Helicase conserved C-terminal domain CJ306_27730 PF04851 Type III restriction enzyme, res subunit CJ306_27735 PF01476 LysM domain CJ306_27735 PF00877 NlpC/P60 family CJ306_27740 PF01638 HxlR-like helix-turn-helix CJ306_27745 PF02645 Uncharacterised protein, DegV family COG1307 CJ306_27750 PF01205 Uncharacterized protein family UPF0029 CJ306_27750 PF09186 Domain of unknown function (DUF1949) CJ306_27755 PF03816 Cell envelope-related transcriptional attenuator domain CJ306_27760 PF02350 UDP-N-acetylglucosamine 2-epimerase CJ306_27765 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CJ306_27765 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CJ306_27765 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CJ306_27770 PF00953 Glycosyl transferase family 4 CJ306_27780 PF00158 Sigma-54 interaction domain CJ306_27780 PF00874 PRD domain CJ306_27780 PF03610 PTS system fructose IIA component CJ306_27790 PF02417 Chromate transporter CJ306_27795 PF04794 YdjC-like protein CJ306_27800 PF02056 Family 4 glycosyl hydrolase CJ306_27800 PF11975 Family 4 glycosyl hydrolase C-terminal domain CJ306_27805 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CJ306_27810 PF02378 Phosphotransferase system, EIIC CJ306_27815 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CJ306_27825 PF02675 S-adenosylmethionine decarboxylase CJ306_27830 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CJ306_27835 PF02378 Phosphotransferase system, EIIC CJ306_27840 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CJ306_27845 PF00375 Sodium:dicarboxylate symporter family CJ306_27865 PF03466 LysR substrate binding domain CJ306_27865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJ306_27880 PF01654 Cytochrome bd terminal oxidase subunit I CJ306_27885 PF02322 Cytochrome bd terminal oxidase subunit II CJ306_27890 PF02040 Arsenical pump membrane protein CJ306_27895 PF13667 ThiC-associated domain CJ306_27895 PF01964 Radical SAM ThiC family CJ306_27920 PF02652 L-lactate permease CJ306_27930 PF09988 Uncharacterized metal-binding protein (DUF2227) CJ306_27945 PF00884 Sulfatase CJ306_27955 PF01063 Amino-transferase class IV CJ306_27960 PF00877 NlpC/P60 family CJ306_27960 PF01476 LysM domain CJ306_27965 PF01773 Na+ dependent nucleoside transporter N-terminus CJ306_27965 PF07662 Na+ dependent nucleoside transporter C-terminus CJ306_27985 PF02028 BCCT, betaine/carnitine/choline family transporter CJ306_27995 PF06725 3D domain CJ306_27995 PF01476 LysM domain CJ306_28020 PF04434 SWIM zinc finger CJ306_28025 PF00176 SNF2 family N-terminal domain CJ306_28025 PF12419 SNF2 Helicase protein CJ306_28025 PF00271 Helicase conserved C-terminal domain CJ306_28055 PF04545 Sigma-70, region 4 CJ306_28055 PF04542 Sigma-70 region 2 CJ306_28060 PF04893 Yip1 domain CJ306_28065 PF02687 FtsX-like permease family CJ306_28065 PF12704 MacB-like periplasmic core domain CJ306_28070 PF00005 ABC transporter CJ306_28090 PF07690 Major Facilitator Superfamily CJ306_28105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJ306_28105 PF00512 His Kinase A (phospho-acceptor) domain CJ306_28105 PF16736 Single Cache-like CJ306_28105 PF00989 PAS fold CJ306_28110 PF00072 Response regulator receiver domain CJ306_28110 PF00486 Transcriptional regulatory protein, C terminal CJ306_28115 PF16363 GDP-mannose 4,6 dehydratase CJ306_28125 PF03816 Cell envelope-related transcriptional attenuator domain CJ306_28140 PF00535 Glycosyl transferase family 2 CJ306_28145 PF00534 Glycosyl transferases group 1 CJ306_28145 PF13439 Glycosyltransferase Family 4 CJ306_28150 PF02397 Bacterial sugar transferase CJ306_28155 PF01370 NAD dependent epimerase/dehydratase family CJ306_28160 PF07478 D-ala D-ala ligase C-terminus CJ306_28160 PF01820 D-ala D-ala ligase N-terminus CJ306_28165 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CJ306_28170 PF02719 Polysaccharide biosynthesis protein CJ306_28175 PF00483 Nucleotidyl transferase CJ306_28185 PF13614 AAA domain CJ306_28190 PF13807 G-rich domain on putative tyrosine kinase CJ306_28190 PF02706 Chain length determinant protein CJ306_28195 PF13614 AAA domain CJ306_28200 PF07977 FabA-like domain CJ306_28210 PF12116 Stage III sporulation protein D CJ306_28220 PF01551 Peptidase family M23 CJ306_28230 PF00005 ABC transporter CJ306_28235 PF04397 LytTr DNA-binding domain CJ306_28235 PF00072 Response regulator receiver domain CJ306_28240 PF08486 Stage II sporulation protein CJ306_28245 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CJ306_28255 PF06612 Protein of unknown function (DUF1146) CJ306_28260 PF00361 Proton-conducting membrane transporter CJ306_28265 PF00361 Proton-conducting membrane transporter CJ306_28270 PF00361 Proton-conducting membrane transporter CJ306_28270 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus CJ306_28270 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CJ306_28275 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CJ306_28280 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 CJ306_28290 PF00146 NADH dehydrogenase CJ306_28295 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CJ306_28300 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CJ306_28305 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CJ306_28310 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 CJ306_28315 PF00563 EAL domain CJ306_28315 PF03707 Bacterial signalling protein N terminal repeat CJ306_28315 PF00990 Diguanylate cyclase, GGDEF domain CJ306_28330 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain CJ306_28330 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CJ306_28335 PF02874 ATP synthase alpha/beta family, beta-barrel domain CJ306_28335 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CJ306_28345 PF00231 ATP synthase CJ306_28355 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CJ306_28355 PF00306 ATP synthase alpha/beta chain, C terminal domain CJ306_28355 PF02874 ATP synthase alpha/beta family, beta-barrel domain CJ306_28360 PF00213 ATP synthase delta (OSCP) subunit CJ306_28365 PF00430 ATP synthase B/B' CF(0) CJ306_28370 PF00137 ATP synthase subunit C CJ306_28375 PF00119 ATP synthase A chain CJ306_28380 PF03899 ATP synthase I chain CJ306_28400 PF00464 Serine hydroxymethyltransferase CJ306_28405 PF04260 Protein of unknown function (DUF436) CJ306_28410 PF02502 Ribose/Galactose Isomerase CJ306_28415 PF01451 Low molecular weight phosphotyrosine protein phosphatase CJ306_28425 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CJ306_28430 PF07681 DoxX CJ306_28435 PF01613 Flavin reductase like domain CJ306_28450 PF02659 Putative manganese efflux pump CJ306_28455 PF03481 Putative GTP-binding controlling metal-binding CJ306_28455 PF01300 Telomere recombination CJ306_28465 PF09551 Stage II sporulation protein R (spore_II_R) CJ306_28470 PF17827 PrmC N-terminal domain CJ306_28470 PF13847 Methyltransferase domain CJ306_28475 PF00472 RF-1 domain CJ306_28475 PF03462 PCRF domain CJ306_28485 PF00265 Thymidine kinase CJ306_28490 PF01197 Ribosomal protein L31 CJ306_28495 PF07498 Rho termination factor, N-terminal domain CJ306_28495 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CJ306_28495 PF07497 Rho termination factor, RNA-binding domain CJ306_28505 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded CJ306_28515 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CJ306_28520 PF01116 Fructose-bisphosphate aldolase class-II CJ306_28525 PF00072 Response regulator receiver domain CJ306_28530 PF10740 Domain of unknown function (DUF2529) CJ306_28535 PF00117 Glutamine amidotransferase class-I CJ306_28535 PF06418 CTP synthase N-terminus CJ306_28540 PF05066 HB1, ASXL, restriction endonuclease HTH domain CJ306_28550 PF02770 Acyl-CoA dehydrogenase, middle domain CJ306_28550 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CJ306_28550 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CJ306_28555 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CJ306_28555 PF02770 Acyl-CoA dehydrogenase, middle domain CJ306_28555 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CJ306_28560 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CJ306_28560 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CJ306_28565 PF02803 Thiolase, C-terminal domain CJ306_28565 PF00108 Thiolase, N-terminal domain CJ306_28570 PF13183 4Fe-4S dicluster domain CJ306_28570 PF02754 Cysteine-rich domain CJ306_28580 PF13091 PLD-like domain CJ306_28585 PF03851 UV-endonuclease UvdE CJ306_28590 PF03707 Bacterial signalling protein N terminal repeat CJ306_28590 PF00990 Diguanylate cyclase, GGDEF domain CJ306_28590 PF00563 EAL domain CJ306_28605 PF03413 Peptidase propeptide and YPEB domain CJ306_28605 PF07504 Fungalysin/Thermolysin Propeptide Motif CJ306_28605 PF01447 Thermolysin metallopeptidase, catalytic domain CJ306_28605 PF02868 Thermolysin metallopeptidase, alpha-helical domain CJ306_28610 PF00072 Response regulator receiver domain CJ306_28610 PF00196 Bacterial regulatory proteins, luxR family CJ306_28615 PF07730 Histidine kinase CJ306_28615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJ306_28625 PF00005 ABC transporter CJ306_28630 PF00557 Metallopeptidase family M24 CJ306_28645 PF02225 PA domain CJ306_28645 PF04389 Peptidase family M28 CJ306_28665 PF04542 Sigma-70 region 2 CJ306_28665 PF08281 Sigma-70, region 4 CJ306_28675 PF00750 tRNA synthetases class I (R) CJ306_28675 PF05746 DALR anticodon binding domain CJ306_28675 PF03485 Arginyl tRNA synthetase N terminal domain CJ306_28680 PF09148 Domain of unknown function (DUF1934) CJ306_28685 PF17676 LD-carboxypeptidase C-terminal domain CJ306_28685 PF02016 LD-carboxypeptidase N-terminal domain CJ306_28700 PF00491 Arginase family CJ306_28705 PF17284 Spermidine synthase tetramerisation domain CJ306_28710 PF07690 Major Facilitator Superfamily CJ306_28715 PF13411 MerR HTH family regulatory protein CJ306_28720 PF03009 Glycerophosphoryl diester phosphodiesterase family CJ306_28725 PF00912 Transglycosylase CJ306_28725 PF00905 Penicillin binding protein transpeptidase domain CJ306_28730 PF08741 YwhD family CJ306_28735 PF02163 Peptidase family M50 CJ306_28740 PF01361 Tautomerase enzyme CJ306_28745 PF01966 HD domain CJ306_28750 PF01497 Periplasmic binding protein CJ306_28755 PF00005 ABC transporter CJ306_28760 PF01032 FecCD transport family CJ306_28765 PF01032 FecCD transport family CJ306_28770 PF07293 Protein of unknown function (DUF1450) CJ306_28780 PF03099 Biotin/lipoate A/B protein ligase family CJ306_28785 PF01515 Phosphate acetyl/butaryl transferase CJ306_28795 PF00768 D-alanyl-D-alanine carboxypeptidase CJ306_28795 PF07943 Penicillin-binding protein 5, C-terminal domain CJ306_28800 PF07486 Cell Wall Hydrolase CJ306_28805 PF09671 Spore coat protein (Spore_GerQ) CJ306_28810 PF04241 Protein of unknown function (DUF423) CJ306_28820 PF02254 TrkA-N domain CJ306_28820 PF07885 Ion channel CJ306_28825 PF00860 Permease family CJ306_28835 PF12823 Domain of unknown function (DUF3817) CJ306_28840 PF03167 Uracil DNA glycosylase superfamily CJ306_28845 PF12679 ABC-2 family transporter protein CJ306_28850 PF00005 ABC transporter CJ306_28855 PF13472 GDSL-like Lipase/Acylhydrolase family CJ306_28860 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CJ306_28860 PF00356 Bacterial regulatory proteins, lacI family CJ306_28870 PF03447 Homoserine dehydrogenase, NAD binding domain CJ306_28870 PF00742 Homoserine dehydrogenase CJ306_28870 PF01842 ACT domain CJ306_28875 PF04204 Homoserine O-succinyltransferase CJ306_28880 PF01053 Cys/Met metabolism PLP-dependent enzyme CJ306_28890 PF13419 Haloacid dehalogenase-like hydrolase CJ306_28895 PF00027 Cyclic nucleotide-binding domain CJ306_28900 PF02525 Flavodoxin-like fold CJ306_28905 PF00072 Response regulator receiver domain CJ306_28905 PF00196 Bacterial regulatory proteins, luxR family CJ306_28910 PF13185 GAF domain CJ306_28910 PF07730 Histidine kinase CJ306_28915 PF08543 Phosphomethylpyrimidine kinase CJ306_28920 PF00990 Diguanylate cyclase, GGDEF domain CJ306_28920 PF07694 5TMR of 5TMR-LYT CJ306_28925 PF04328 Selenoprotein, putative CJ306_28930 PF02554 Carbon starvation protein CstA CJ306_28930 PF13722 5TM C-terminal transporter carbon starvation CstA CJ306_28935 PF00072 Response regulator receiver domain CJ306_28935 PF04397 LytTr DNA-binding domain CJ306_28940 PF07690 Major Facilitator Superfamily CJ306_28950 PF03808 Glycosyl transferase WecB/TagA/CpsF family CJ306_28955 PF00534 Glycosyl transferases group 1 CJ306_28955 PF13439 Glycosyltransferase Family 4 CJ306_28965 PF03458 UPF0126 domain CJ306_28970 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CJ306_28980 PF03061 Thioesterase superfamily CJ306_28985 PF00535 Glycosyl transferase family 2 CJ306_28995 PF00535 Glycosyl transferase family 2 CJ306_29005 PF09586 Bacterial membrane protein YfhO CJ306_29010 PF00535 Glycosyl transferase family 2 CJ306_29015 PF12848 ABC transporter CJ306_29015 PF00005 ABC transporter CJ306_29020 PF00440 Bacterial regulatory proteins, tetR family CJ306_29025 PF00873 AcrB/AcrD/AcrF family CJ306_29030 PF01641 SelR domain CJ306_29030 PF01625 Peptide methionine sulfoxide reductase CJ306_29035 PF01594 AI-2E family transporter CJ306_29040 PF04172 LrgB-like family CJ306_29045 PF03788 LrgA family CJ306_29050 PF04397 LytTr DNA-binding domain CJ306_29050 PF00072 Response regulator receiver domain CJ306_29055 PF13492 GAF domain CJ306_29055 PF06580 Histidine kinase CJ306_29055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJ306_29055 PF07694 5TMR of 5TMR-LYT CJ306_29060 PF07690 Major Facilitator Superfamily CJ306_29065 PF02028 BCCT, betaine/carnitine/choline family transporter CJ306_29070 PF02898 Nitric oxide synthase, oxygenase domain CJ306_29080 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CJ306_29080 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CJ306_29090 PF02293 AmiS/UreI family transporter CJ306_29100 PF16363 GDP-mannose 4,6 dehydratase CJ306_29105 PF03006 Haemolysin-III related CJ306_29115 PF00270 DEAD/DEAH box helicase CJ306_29115 PF00271 Helicase conserved C-terminal domain CJ306_29115 PF03880 DbpA RNA binding domain CJ306_29120 PF00478 IMP dehydrogenase / GMP reductase domain CJ306_29125 PF01432 Peptidase family M3 CJ306_29125 PF08439 Oligopeptidase F CJ306_29135 PF13188 PAS domain CJ306_29135 PF00512 His Kinase A (phospho-acceptor) domain CJ306_29135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJ306_29135 PF13426 PAS domain CJ306_29135 PF00989 PAS fold CJ306_29140 PF02590 Predicted SPOUT methyltransferase CJ306_29150 PF13180 PDZ domain CJ306_29155 PF00753 Metallo-beta-lactamase superfamily CJ306_29160 PF09648 YycH protein CJ306_29170 PF00672 HAMP domain CJ306_29170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJ306_29170 PF13426 PAS domain CJ306_29170 PF00512 His Kinase A (phospho-acceptor) domain CJ306_29175 PF00072 Response regulator receiver domain CJ306_29175 PF00486 Transcriptional regulatory protein, C terminal CJ306_29200 PF00709 Adenylosuccinate synthetase CJ306_29205 PF03796 DnaB-like helicase C terminal domain CJ306_29205 PF00772 DnaB-like helicase N terminal domain CJ306_29210 PF03948 Ribosomal protein L9, C-terminal domain CJ306_29210 PF01281 Ribosomal protein L9, N-terminal domain CJ306_29215 PF01368 DHH family CJ306_29215 PF02272 DHHA1 domain CJ306_29220 PF09991 Predicted membrane protein (DUF2232) CJ306_29225 PF01084 Ribosomal protein S18 CJ306_29230 PF00436 Single-strand binding protein family CJ306_29235 PF01250 Ribosomal protein S6 CJ306_29240 PF06071 Protein of unknown function (DUF933) CJ306_29240 PF01926 50S ribosome-binding GTPase CJ306_29245 PF06107 Bacterial protein of unknown function (DUF951) CJ306_29250 PF00924 Mechanosensitive ion channel CJ306_29255 PF06866 Protein of unknown function (DUF1256) CJ306_29260 PF17762 HTH domain found in ParB protein CJ306_29260 PF02195 ParB-like nuclease domain CJ306_29265 PF13614 AAA domain CJ306_29270 PF17762 HTH domain found in ParB protein CJ306_29270 PF02195 ParB-like nuclease domain CJ306_29275 PF02527 rRNA small subunit methyltransferase G CJ306_29280 PF01134 Glucose inhibited division protein A CJ306_29280 PF13932 GidA associated domain CJ306_29285 PF10396 GTP-binding protein TrmE N-terminus CJ306_29285 PF12631 MnmE helical domain CJ306_29285 PF01926 50S ribosome-binding GTPase CJ306_29290 PF14804 Jag N-terminus CJ306_29290 PF01424 R3H domain CJ306_29295 PF02096 60Kd inner membrane protein CJ306_29300 PF00825 Ribonuclease P CJ306_29305 PF00468 Ribosomal protein L34 CJ306_29555 PF13529 Peptidase_C39 like family CJ306_29560 PF00561 alpha/beta hydrolase fold CJ306_29580 PF00535 Glycosyl transferase family 2 CJ306_29600 PF01569 PAP2 superfamily CJ306_29610 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment CJ306_29650 PF01348 Type II intron maturase CJ306_29650 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CJ306_29705 PF00005 ABC transporter CJ306_29730 PF04235 Protein of unknown function (DUF418) CJ306_29765 PF11495 Archaeal transcriptional regulator TrmB CJ306_29765 PF01978 Sugar-specific transcriptional regulator TrmB CJ306_29815 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJ306_29815 PF13192 Thioredoxin domain CJ306_29820 PF00578 AhpC/TSA family CJ306_29825 PF00324 Amino acid permease CJ306_29840 PF02525 Flavodoxin-like fold CJ306_29845 PF01638 HxlR-like helix-turn-helix CJ306_29850 PF14602 Hexapeptide repeat of succinyl-transferase CJ306_29850 PF12464 Maltose acetyltransferase CJ306_29855 PF01638 HxlR-like helix-turn-helix CJ306_29925 PF04231 Endonuclease I CJ306_29945 PF07282 Putative transposase DNA-binding domain CJ306_29945 PF12323 Helix-turn-helix domain CJ306_29945 PF01385 Probable transposase CJ306_29985 PF17209 Hfq protein CJ306_30005 PF13520 Amino acid permease CJ306_30010 PF01037 Lrp/AsnC ligand binding domain CJ306_30015 PF01842 ACT domain CJ306_30015 PF03315 Serine dehydratase beta chain CJ306_30020 PF03313 Serine dehydratase alpha chain CJ306_30030 PF01022 Bacterial regulatory protein, arsR family CJ306_30040 PF00440 Bacterial regulatory proteins, tetR family CJ306_30040 PF16859 Tetracyclin repressor-like, C-terminal domain CJ306_30045 PF07690 Major Facilitator Superfamily CJ306_30055 PF00282 Pyridoxal-dependent decarboxylase conserved domain CJ306_30065 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family CJ306_30070 PF12323 Helix-turn-helix domain CJ306_30070 PF01385 Probable transposase CJ306_30070 PF07282 Putative transposase DNA-binding domain CJ306_30075 PF10842 Protein of unknown function (DUF2642) CJ306_30085 PF13536 Putative multidrug resistance efflux transporter CJ306_30090 PF00392 Bacterial regulatory proteins, gntR family CJ306_30090 PF07729 FCD domain CJ306_30100 PF17209 Hfq protein CJ306_30105 PF01810 LysE type translocator CJ306_30115 PF00144 Beta-lactamase CJ306_30115 PF11954 Domain of unknown function (DUF3471) CJ306_30120 PF01098 Cell cycle protein CJ306_30125 PF01769 Divalent cation transporter CJ306_30125 PF00571 CBS domain CJ306_30125 PF03448 MgtE intracellular N domain CJ306_30135 PF07690 Major Facilitator Superfamily CJ306_30140 PF03466 LysR substrate binding domain CJ306_30140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJ306_30155 PF00155 Aminotransferase class I and II CJ306_30170 PF00583 Acetyltransferase (GNAT) family CJ306_30175 PF13539 D-alanyl-D-alanine carboxypeptidase CJ306_30180 PF01471 Putative peptidoglycan binding domain CJ306_30180 PF01520 N-acetylmuramoyl-L-alanine amidase CJ306_30205 PF01223 DNA/RNA non-specific endonuclease CJ306_30210 PF00246 Zinc carboxypeptidase CJ306_30215 PF00589 Phage integrase family CJ306_30215 PF13495 Phage integrase, N-terminal SAM-like domain CJ306_30255 PF00753 Metallo-beta-lactamase superfamily CJ306_30255 PF00581 Rhodanese-like domain CJ306_30260 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJ306_30270 PF18801 response regulator aspartate phosphatase H, N terminal CJ306_30280 PF02743 Cache domain CJ306_30280 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CJ306_30280 PF00672 HAMP domain CJ306_30295 PF01385 Probable transposase CJ306_30295 PF12323 Helix-turn-helix domain CJ306_30295 PF07282 Putative transposase DNA-binding domain CJ306_30305 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading CJ306_30305 PF18416 N-acetylglucosamine binding protein domain 2 CJ306_30310 PF01022 Bacterial regulatory protein, arsR family CJ306_30320 PF18801 response regulator aspartate phosphatase H, N terminal CJ306_30335 PF07282 Putative transposase DNA-binding domain CJ306_30335 PF12323 Helix-turn-helix domain CJ306_30335 PF01385 Probable transposase CJ306_30360 PF01022 Bacterial regulatory protein, arsR family CJ306_30365 PF02600 Disulfide bond formation protein DsbB CJ306_30395 PF06800 Sugar transport protein CJ306_30410 PF00664 ABC transporter transmembrane region CJ306_30410 PF00005 ABC transporter CJ306_30415 PF06463 Molybdenum Cofactor Synthesis C CJ306_30415 PF04055 Radical SAM superfamily CJ306_30425 PF00005 ABC transporter CJ306_30435 PF00082 Subtilase family CJ306_30440 PF02677 Epoxyqueuosine reductase QueH CJ306_30445 PF08378 Nuclease-related domain CJ306_30480 PF01471 Putative peptidoglycan binding domain CJ306_30480 PF01476 LysM domain CJ306_30480 PF01510 N-acetylmuramoyl-L-alanine amidase CJ306_30485 PF02254 TrkA-N domain CJ306_30485 PF02080 TrkA-C domain CJ306_30495 PF00990 Diguanylate cyclase, GGDEF domain CJ306_30495 PF00563 EAL domain CJ306_30495 PF03707 Bacterial signalling protein N terminal repeat CJ306_30520 PF00005 ABC transporter CJ306_30525 PF00664 ABC transporter transmembrane region CJ306_30525 PF00005 ABC transporter CJ306_30530 PF13575 Domain of unknown function (DUF4135) CJ306_30530 PF05147 Lanthionine synthetase C-like protein CJ306_30545 PF02195 ParB-like nuclease domain CJ306_30550 PF02423 Ornithine cyclodeaminase/mu-crystallin family CJ306_30555 PF00291 Pyridoxal-phosphate dependent enzyme CJ306_30560 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CJ306_30560 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CJ306_30565 PF01648 4'-phosphopantetheinyl transferase superfamily CJ306_30580 PF00550 Phosphopantetheine attachment site CJ306_30580 PF00501 AMP-binding enzyme CJ306_30580 PF00668 Condensation domain CJ306_30580 PF13193 AMP-binding enzyme C-terminal domain CJ306_30590 PF00664 ABC transporter transmembrane region CJ306_30590 PF00005 ABC transporter CJ306_30595 PF00296 Luciferase-like monooxygenase CJ306_30600 PF08659 KR domain CJ306_30600 PF00501 AMP-binding enzyme CJ306_30600 PF00550 Phosphopantetheine attachment site CJ306_30600 PF02801 Beta-ketoacyl synthase, C-terminal domain CJ306_30600 PF16197 Ketoacyl-synthetase C-terminal extension CJ306_30600 PF00109 Beta-ketoacyl synthase, N-terminal domain CJ306_30600 PF14765 Polyketide synthase dehydratase CJ306_30600 PF00668 Condensation domain CJ306_30600 PF13193 AMP-binding enzyme C-terminal domain CJ306_30605 PF00668 Condensation domain CJ306_30605 PF00975 Thioesterase domain CJ306_30605 PF00550 Phosphopantetheine attachment site CJ306_30605 PF13193 AMP-binding enzyme C-terminal domain CJ306_30605 PF00501 AMP-binding enzyme CJ306_30610 PF02770 Acyl-CoA dehydrogenase, middle domain CJ306_30610 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CJ306_30610 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CJ306_30615 PF00550 Phosphopantetheine attachment site CJ306_30620 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CJ306_30620 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CJ306_30625 PF00698 Acyl transferase domain CJ306_30635 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CJ306_30635 PF02770 Acyl-CoA dehydrogenase, middle domain CJ306_30635 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CJ306_30645 PF00668 Condensation domain CJ306_30645 PF13193 AMP-binding enzyme C-terminal domain CJ306_30645 PF00550 Phosphopantetheine attachment site CJ306_30645 PF00501 AMP-binding enzyme CJ306_30650 PF00975 Thioesterase domain CJ306_30650 PF00550 Phosphopantetheine attachment site CJ306_30650 PF13193 AMP-binding enzyme C-terminal domain CJ306_30650 PF00501 AMP-binding enzyme CJ306_30650 PF00668 Condensation domain CJ306_30655 PF08659 KR domain CJ306_30655 PF02801 Beta-ketoacyl synthase, C-terminal domain CJ306_30655 PF14765 Polyketide synthase dehydratase CJ306_30655 PF02801 Beta-ketoacyl synthase, C-terminal domain CJ306_30655 PF00501 AMP-binding enzyme CJ306_30655 PF00109 Beta-ketoacyl synthase, N-terminal domain CJ306_30655 PF13193 AMP-binding enzyme C-terminal domain CJ306_30655 PF00668 Condensation domain CJ306_30655 PF16197 Ketoacyl-synthetase C-terminal extension CJ306_30655 PF00550 Phosphopantetheine attachment site CJ306_30655 PF00109 Beta-ketoacyl synthase, N-terminal domain CJ306_30655 PF00668 Condensation domain CJ306_30655 PF13193 AMP-binding enzyme C-terminal domain CJ306_30655 PF00550 Phosphopantetheine attachment site CJ306_30655 PF00501 AMP-binding enzyme CJ306_30655 PF08659 KR domain CJ306_30655 PF16197 Ketoacyl-synthetase C-terminal extension CJ306_30655 PF14765 Polyketide synthase dehydratase CJ306_30675 PF13193 AMP-binding enzyme C-terminal domain CJ306_30675 PF00550 Phosphopantetheine attachment site CJ306_30675 PF00975 Thioesterase domain CJ306_30675 PF00501 AMP-binding enzyme CJ306_30675 PF00668 Condensation domain CJ306_30680 PF00248 Aldo/keto reductase family CJ306_30715 PF00132 Bacterial transferase hexapeptide (six repeats) CJ306_30720 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CJ306_30725 PF00535 Glycosyl transferase family 2 CJ306_30730 PF00378 Enoyl-CoA hydratase/isomerase CJ306_30745 PF07690 Major Facilitator Superfamily CJ306_30760 PF01381 Helix-turn-helix CJ306_30765 PF02463 RecF/RecN/SMC N terminal domain CJ306_30770 PF00580 UvrD/REP helicase N-terminal domain CJ306_30770 PF13361 UvrD-like helicase C-terminal domain CJ306_30830 PF00145 C-5 cytosine-specific DNA methylase CJ306_30840 PF07728 AAA domain (dynein-related subfamily) CJ306_30840 PF12102 Domain of unknown function (DUF3578) CJ306_30860 PF18801 response regulator aspartate phosphatase H, N terminal CJ306_30880 PF18801 response regulator aspartate phosphatase H, N terminal CJ306_30880 PF13176 Tetratricopeptide repeat CJ306_30890 PF00005 ABC transporter CJ306_30895 PF05147 Lanthionine synthetase C-like protein CJ306_30900 PF04738 Lantibiotic dehydratase, N terminus CJ306_30900 PF14028 Lantibiotic biosynthesis dehydratase C-term CJ306_30905 PF05139 Erythromycin esterase CJ306_30910 PF00082 Subtilase family CJ306_30945 PF02824 TGS domain CJ306_30945 PF04607 Region found in RelA / SpoT proteins CJ306_30945 PF13291 ACT domain CJ306_30965 PF00216 Bacterial DNA-binding protein CJ306_30985 PF18801 response regulator aspartate phosphatase H, N terminal CJ306_30995 PF00817 impB/mucB/samB family CJ306_30995 PF11799 impB/mucB/samB family C-terminal domain CJ306_30995 PF11798 IMS family HHH motif CJ306_31025 PF02687 FtsX-like permease family CJ306_31030 PF00005 ABC transporter CJ306_31035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJ306_31040 PF00486 Transcriptional regulatory protein, C terminal CJ306_31040 PF00072 Response regulator receiver domain CJ306_31055 PF00293 NUDIX domain CJ306_31065 PF12389 Camelysin metallo-endopeptidase CJ306_31070 PF02225 PA domain CJ306_31070 PF05922 Peptidase inhibitor I9 CJ306_31070 PF00082 Subtilase family CJ306_31070 PF13860 FlgD Ig-like domain CJ306_31080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJ306_31080 PF13492 GAF domain CJ306_31080 PF07730 Histidine kinase CJ306_31085 PF13537 Glutamine amidotransferase domain CJ306_31085 PF00733 Asparagine synthase CJ306_31095 PF17932 Tetracyclin repressor-like, C-terminal domain CJ306_31095 PF00440 Bacterial regulatory proteins, tetR family CJ306_31100 PF01522 Polysaccharide deacetylase CJ306_31110 PF00291 Pyridoxal-phosphate dependent enzyme CJ306_31120 PF01381 Helix-turn-helix CJ306_31125 PF00395 S-layer homology domain CJ306_31125 PF01520 N-acetylmuramoyl-L-alanine amidase CJ306_31135 PF12323 Helix-turn-helix domain CJ306_31135 PF01385 Probable transposase CJ306_31135 PF07282 Putative transposase DNA-binding domain CJ306_31160 PF14436 Bacterial EndoU nuclease CJ306_31160 PF04740 LXG domain of WXG superfamily CJ306_31175 PF04740 LXG domain of WXG superfamily CJ306_31175 PF14436 Bacterial EndoU nuclease CJ306_31180 PF01385 Probable transposase CJ306_31180 PF12323 Helix-turn-helix domain CJ306_31180 PF07282 Putative transposase DNA-binding domain CJ306_31210 PF00512 His Kinase A (phospho-acceptor) domain CJ306_31210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJ306_31210 PF00672 HAMP domain CJ306_31215 PF00072 Response regulator receiver domain CJ306_31215 PF00486 Transcriptional regulatory protein, C terminal CJ306_31265 PF01510 N-acetylmuramoyl-L-alanine amidase CJ306_31280 PF01471 Putative peptidoglycan binding domain CJ306_31280 PF01476 LysM domain CJ306_31280 PF01510 N-acetylmuramoyl-L-alanine amidase CJ306_31285 PF01551 Peptidase family M23 CJ306_31285 PF04225 Opacity-associated protein A LysM-like domain CJ306_31350 PF04389 Peptidase family M28 CJ306_31350 PF02225 PA domain CJ306_31395 PF00005 ABC transporter CJ306_31395 PF00664 ABC transporter transmembrane region CJ306_31395 PF03412 Peptidase C39 family CJ306_31460 PF06414 Zeta toxin CJ306_31465 PF00293 NUDIX domain CJ306_31470 PF00453 Ribosomal protein L20 CJ306_31480 PF18801 response regulator aspartate phosphatase H, N terminal CJ306_31500 PF00269 Small, acid-soluble spore proteins, alpha/beta type CJ306_31505 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CJ306_31505 PF00672 HAMP domain CJ306_31565 PF05791 Bacillus haemolytic enterotoxin (HBL) CJ306_31680 PF13491 4TM region of DNA translocase FtsK/SpoIIIE CJ306_31680 PF17854 FtsK alpha domain CJ306_31680 PF09397 Ftsk gamma domain CJ306_31680 PF01580 FtsK/SpoIIIE family