locus-tag	class	description
CJ306_00010	COG0592	DNA-directed DNA polymerase activity
CJ306_00015	COG2501	S4 domain
CJ306_00025	COG0187	DNA topoisomerase II activity
CJ306_00030	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
CJ306_00065	COG0516	GMP reductase activity
CJ306_00065	COG0517	IMP dehydrogenase activity
CJ306_00070	COG1686	Belongs to the peptidase S11 family
CJ306_00100	COG1428	Deoxynucleoside kinase
CJ306_00105	COG1428	Deoxynucleoside kinase
CJ306_00110	COG1335	isochorismatase
CJ306_00120	COG0590	tRNA wobble adenosine to inosine editing
CJ306_00130	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
CJ306_00185	COG1982	Orn Lys Arg decarboxylase major
CJ306_00195	COG0470	DNA polymerase III
CJ306_00200	COG1774	PSP1 C-terminal conserved region
CJ306_00210	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
CJ306_00220	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
CJ306_00225	COG2002	toxin-antitoxin pair type II binding
CJ306_00235	COG0084	hydrolase, TatD family'
CJ306_00255	COG4466	Protein conserved in bacteria
CJ306_00270	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
CJ306_00275	COG0251	oxidation-reduction process
CJ306_00290	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
CJ306_00305	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
CJ306_00310	COG2002	toxin-antitoxin pair type II binding
CJ306_00315	COG2244	polysaccharide biosynthetic process
CJ306_00320	COG3956	TIGRFAM MazG family protein
CJ306_00325	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
CJ306_00345	COG1098	S1 RNA binding domain
CJ306_00360	COG2208	phosphoserine phosphatase activity
CJ306_00375	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
CJ306_00390	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
CJ306_00395	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
CJ306_00400	COG0512	Glutamine amidotransferase of anthranilate synthase
CJ306_00405	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
CJ306_00410	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
CJ306_00415	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
CJ306_00420	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
CJ306_00425	COG1396	sequence-specific DNA binding
CJ306_00430	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
CJ306_00520	COG3880	PFAM UvrB UvrC protein
CJ306_00530	COG0542	response to heat
CJ306_00535	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
CJ306_00545	COG4956	integral membrane protein (PIN domain superfamily)
CJ306_00565	COG1045	serine acetyltransferase
CJ306_00580	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
CJ306_00585	COG3688	RNA-binding protein containing a PIN domain
CJ306_00595	COG0267	Belongs to the bacterial ribosomal protein bL33 family
CJ306_00600	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
CJ306_00605	COG0250	Participates in transcription elongation, termination and antitermination
CJ306_00630	COG2813	Specifically methylates the guanine in position
CJ306_00645	COG1358	cellular component organization or biogenesis
CJ306_00755	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
CJ306_00780	COG0201	protein transport
CJ306_00790	COG0024	Methionine aminopeptidase
CJ306_00800	COG0257	Belongs to the bacterial ribosomal protein bL36 family
CJ306_00835	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
CJ306_00860	COG0860	N-Acetylmuramoyl-L-alanine amidase
CJ306_00865	COG0489	protein tyrosine kinase activity
CJ306_00875	COG2194	sulfuric ester hydrolase activity
CJ306_00880	COG0726	polysaccharide deacetylase
CJ306_00960	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
CJ306_00965	COG4856	YbbR-like protein
CJ306_01005	COG1028	Short-chain dehydrogenase reductase Sdr
CJ306_01010	COG2011	ABC-type metal ion transport system permease component
CJ306_01020	COG1464	Belongs to the NlpA lipoprotein family
CJ306_01025	COG0604	alcohol dehydrogenase
CJ306_01035	COG0277	FAD linked oxidase domain protein
CJ306_01040	COG2271	Major facilitator Superfamily
CJ306_01050	COG2814	Major facilitator Superfamily
CJ306_01065	COG0601	transmembrane transport
CJ306_01070	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CJ306_01075	COG0444	Belongs to the ABC transporter superfamily
CJ306_01080	COG4608	Belongs to the ABC transporter superfamily
CJ306_01085	COG4166	transmembrane transport
CJ306_01095	COG2207	Transcriptional regulator
CJ306_01110	COG4166	transmembrane transport
CJ306_01115	COG4166	transmembrane transport
CJ306_01135	COG4149	molybdate abc transporter
CJ306_01140	COG0725	ABC transporter, periplasmic molybdate-binding protein
CJ306_01145	COG1910	domain protein
CJ306_01165	COG0697	spore germination
CJ306_01180	COG0204	Acyl-transferase
CJ306_01195	COG1609	Transcriptional regulator
CJ306_01205	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CJ306_01225	COG5298	Protein conserved in bacteria
CJ306_01250	COG0488	(ABC) transporter
CJ306_01265	COG0747	negative chemotaxis
CJ306_01270	COG0601	transmembrane transport
CJ306_01280	COG0444	Belongs to the ABC transporter superfamily
CJ306_01285	COG4608	Belongs to the ABC transporter superfamily
CJ306_01290	COG0561	phosphatase activity
CJ306_01325	COG3185	4-Hydroxyphenylpyruvate dioxygenase
CJ306_01330	COG0179	Fumarylacetoacetate (FAA) hydrolase
CJ306_01345	COG0531	amino acid
CJ306_01350	COG2814	Major facilitator Superfamily
CJ306_01360	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
CJ306_01370	COG4294	response to UV
CJ306_01375	COG0705	Rhomboid family
CJ306_01385	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
CJ306_01390	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
CJ306_01395	COG0864	Transcriptional regulator
CJ306_01400	COG2337	Toxic component of a toxin-antitoxin (TA) module
CJ306_01405	COG2183	response to ionizing radiation
CJ306_01505	COG0802	atpase or kinase
CJ306_01510	COG1214	PFAM Peptidase M22, glycoprotease
CJ306_01515	COG0456	acetyltransferase
CJ306_01525	COG0488	(ABC) transporter
CJ306_01540	COG1266	CAAX protease self-immunity
CJ306_01560	COG2252	PERMEase
CJ306_01570	COG5002	protein histidine kinase activity
CJ306_01600	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
CJ306_01645	COG2205	protein histidine kinase activity
CJ306_01650	COG0745	RESPONSE REGULATOR receiver
CJ306_01680	COG2226	methyltransferase
CJ306_01690	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CJ306_01700	COG0463	Glycosyl transferase, family 2
CJ306_01700	COG1216	Glycosyl transferase, family 2
CJ306_01720	COG0697	spore germination
CJ306_01750	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
CJ306_01755	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
CJ306_01760	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
CJ306_01770	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
CJ306_01785	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
CJ306_01795	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
CJ306_01805	COG0151	Belongs to the GarS family
CJ306_01835	COG0210	DNA helicase
CJ306_01845	COG4851	CamS sex pheromone cAM373 precursor
CJ306_01860	COG1335	isochorismatase
CJ306_01870	COG2011	ABC-type metal ion transport system permease component
CJ306_01875	COG1464	Belongs to the NlpA lipoprotein family
CJ306_01890	COG0003	Pfam Anion-transporting ATPase
CJ306_01895	COG1846	Transcriptional regulator
CJ306_01900	COG4682	membrane
CJ306_01920	COG1597	lipid kinase activity
CJ306_01930	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
CJ306_01940	COG1012	belongs to the aldehyde dehydrogenase family
CJ306_01945	COG2076	Multidrug Resistance protein
CJ306_01955	COG2309	aminopeptidase activity
CJ306_01970	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
CJ306_01980	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
CJ306_01985	COG4807	Protein conserved in bacteria
CJ306_02015	COG1473	amidohydrolase
CJ306_02035	COG0450	alkyl hydroperoxide reductase
CJ306_02040	COG4857	Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate
CJ306_02050	COG0235	Class ii aldolase
CJ306_02055	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CJ306_02060	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CJ306_02065	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CJ306_02090	COG0166	Belongs to the GPI family
CJ306_02115	COG5002	protein histidine kinase activity
CJ306_02135	COG3541	Predicted nucleotidyltransferase
CJ306_02140	COG2814	Major facilitator Superfamily
CJ306_02145	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CJ306_02145	COG0723	plastoquinol--plastocyanin reductase activity
CJ306_02155	COG0765	amino acid transport
CJ306_02160	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CJ306_02170	COG0840	transmembrane signaling receptor activity
CJ306_02195	COG0549	Belongs to the carbamate kinase family
CJ306_02200	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
CJ306_02210	COG0277	FAD linked oxidase domain protein
CJ306_02215	COG0366	Alpha amylase catalytic
CJ306_02220	COG2190	(PTS) system
CJ306_02220	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CJ306_02220	COG1263	PTS System
CJ306_02290	COG2319	Wd-40 repeat
CJ306_02290	COG5635	Nacht domain
CJ306_02310	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
CJ306_02330	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CJ306_02335	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
CJ306_02340	COG1116	anion transmembrane transporter activity
CJ306_02395	COG2270	Major facilitator Superfamily
CJ306_02425	COG2310	stress, protein
CJ306_02430	COG2310	stress, protein
CJ306_02435	COG2310	stress, protein
CJ306_02440	COG0861	Integral membrane protein TerC family
CJ306_02450	COG3853	Toxic anion resistance protein (TelA)
CJ306_02465	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
CJ306_02475	COG1295	ribonuclease BN
CJ306_02485	COG2217	Heavy metal translocating P-type atpase
CJ306_02490	COG0697	spore germination
CJ306_02510	COG0586	Pfam SNARE associated Golgi protein
CJ306_02525	COG3871	stress protein (general stress protein 26)
CJ306_02530	COG0387	Pfam Sodium calcium exchanger
CJ306_02540	COG0535	radical SAM domain protein
CJ306_02560	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
CJ306_02565	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
CJ306_02580	COG3829	transcription factor binding
CJ306_02590	COG0833	amino acid
CJ306_02595	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
CJ306_02630	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CJ306_02630	COG1263	PTS System
CJ306_02635	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
CJ306_02650	COG0463	Glycosyl transferase, family 2
CJ306_02660	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CJ306_02660	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
CJ306_02680	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
CJ306_02700	COG1228	amidohydrolase
CJ306_02705	COG1090	epimerase
CJ306_02735	COG1988	membrane-bound metal-dependent
CJ306_02740	COG1194	a g-specific adenine glycosylase
CJ306_02765	COG1132	(ABC) transporter
CJ306_02770	COG4129	membrane
CJ306_02775	COG0067	glutamate synthase
CJ306_02775	COG0070	glutamate synthase
CJ306_02775	COG0069	glutamate synthase activity
CJ306_02785	COG4555	ABC transporter
CJ306_02805	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
CJ306_02810	COG0735	belongs to the Fur family
CJ306_02935	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
CJ306_02960	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
CJ306_02975	COG2766	serine protein kinase
CJ306_02995	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
CJ306_03005	COG1585	Membrane protein implicated in regulation of membrane protease activity
CJ306_03010	COG2268	Band 7 protein
CJ306_03020	COG3290	protein histidine kinase activity
CJ306_03025	COG4565	transcriptional regulatory protein
CJ306_03030	COG2851	Citrate transporter
CJ306_03050	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
CJ306_03055	COG3842	ATPase activity
CJ306_03060	COG1175	transmembrane transport
CJ306_03065	COG0395	ABC-type sugar transport system, permease component
CJ306_03075	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
CJ306_03080	COG0745	RESPONSE REGULATOR receiver
CJ306_03085	COG5002	protein histidine kinase activity
CJ306_03095	COG4990	cell redox homeostasis
CJ306_03105	COG3290	protein histidine kinase activity
CJ306_03110	COG4565	transcriptional regulatory protein
CJ306_03115	COG3493	citrate carrier protein
CJ306_03120	COG0281	malic enzyme
CJ306_03130	COG0697	spore germination
CJ306_03135	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CJ306_03145	COG5002	protein histidine kinase activity
CJ306_03150	COG0745	RESPONSE REGULATOR receiver
CJ306_03160	COG0454	-acetyltransferase
CJ306_03160	COG0456	acetyltransferase
CJ306_03165	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
CJ306_03170	COG3383	formate dehydrogenase (NAD+) activity
CJ306_03175	COG2427	Protein of unknown function (DUF1641)
CJ306_03190	COG0531	amino acid
CJ306_03200	COG0640	Transcriptional regulator
CJ306_03205	COG2217	Heavy metal translocating P-type atpase
CJ306_03210	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
CJ306_03225	COG3227	Zinc metalloprotease (Elastase)
CJ306_03245	COG2720	vancomycin resistance protein
CJ306_03250	COG1316	TRANSCRIPTIONal
CJ306_03255	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
CJ306_03260	COG0346	lactoylglutathione lyase activity
CJ306_03265	COG1253	flavin adenine dinucleotide binding
CJ306_03270	COG1027	Aspartate ammonia-lyase
CJ306_03275	COG1620	l-lactate permease
CJ306_03290	COG3104	oligopeptide transport
CJ306_03295	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CJ306_03300	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CJ306_03305	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CJ306_03325	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CJ306_03335	COG4548	von Willebrand factor, type A
CJ306_03340	COG0714	Associated with various cellular activities
CJ306_03365	COG0531	amino acid
CJ306_03370	COG2188	Transcriptional regulator
CJ306_03375	COG1263	PTS System
CJ306_03375	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CJ306_03380	COG0366	Alpha amylase catalytic
CJ306_03395	COG0697	spore germination
CJ306_03405	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
CJ306_03410	COG1115	amino acid carrier protein
CJ306_03420	COG1126	abc transporter atp-binding protein
CJ306_03425	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CJ306_03430	COG0765	amino acid transport
CJ306_03435	COG0765	amino acid transport
CJ306_03440	COG0833	amino acid
CJ306_03455	COG1595	DNA-templated transcription, initiation
CJ306_03465	COG2378	regulation of single-species biofilm formation
CJ306_03470	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
CJ306_03475	COG5002	protein histidine kinase activity
CJ306_03500	COG0659	secondary active sulfate transmembrane transporter activity
CJ306_03515	COG2271	Major facilitator Superfamily
CJ306_03520	COG1846	Transcriptional regulator
CJ306_03525	COG0477	Major facilitator Superfamily
CJ306_03530	COG1609	Transcriptional regulator
CJ306_03535	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CJ306_03550	COG1172	Belongs to the binding-protein-dependent transport system permease family
CJ306_03555	COG1879	ABC-type sugar transport system periplasmic component
CJ306_03580	COG1063	alcohol dehydrogenase
CJ306_03630	COG0840	transmembrane signaling receptor activity
CJ306_03635	COG3584	3D domain protein
CJ306_03635	COG3583	domain protein
CJ306_03640	COG1476	TRANSCRIPTIONal
CJ306_03660	COG3104	oligopeptide transport
CJ306_03665	COG1114	Component of the transport system for branched-chain amino acids
CJ306_03680	COG1113	amino acid transport
CJ306_03685	COG2252	PERMEase
CJ306_03710	COG2153	protein acetylation
CJ306_03720	COG0569	domain protein
CJ306_03720	COG0475	glutathione-regulated potassium exporter activity
CJ306_03735	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
CJ306_03745	COG0833	amino acid
CJ306_03750	COG4990	cell redox homeostasis
CJ306_03765	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
CJ306_03770	COG0697	spore germination
CJ306_03775	COG0531	amino acid
CJ306_03790	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
CJ306_03795	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
CJ306_03800	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
CJ306_03800	COG1918	ferrous iron import across plasma membrane
CJ306_03805	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
CJ306_03810	COG0573	inorganic phosphate transmembrane transporter activity
CJ306_03815	COG0581	inorganic phosphate transmembrane transporter activity
CJ306_03820	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CJ306_03940	COG2905	signal-transduction protein containing cAMP-binding and CBS domains
CJ306_03965	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
CJ306_03970	COG1116	anion transmembrane transporter activity
CJ306_03975	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CJ306_03980	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
CJ306_03985	COG0352	thiamine-phosphate diphosphorylase activity
CJ306_03990	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CJ306_03995	COG2104	thiamine diphosphate biosynthetic process
CJ306_04005	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
CJ306_04010	COG0351	phosphomethylpyrimidine kinase
CJ306_04055	COG2205	protein histidine kinase activity
CJ306_04060	COG2814	Major facilitator Superfamily
CJ306_04065	COG1846	Transcriptional regulator
CJ306_04090	COG1136	(ABC) transporter
CJ306_04105	COG1172	Belongs to the binding-protein-dependent transport system permease family
CJ306_04110	COG1129	ABC transporter
CJ306_04115	COG1879	ABC-type sugar transport system periplasmic component
CJ306_04120	COG2252	PERMEase
CJ306_04125	COG1028	Short-chain dehydrogenase reductase Sdr
CJ306_04140	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CJ306_04145	COG1621	beta-fructofuranosidase activity
CJ306_04150	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CJ306_04150	COG1263	PTS System
CJ306_04155	COG1609	Transcriptional regulator
CJ306_04205	COG0778	Nitroreductase
CJ306_04210	COG2719	SpoVR family
CJ306_04230	COG0446	pyridine nucleotide-disulphide oxidoreductase
CJ306_04235	COG1937	Protein conserved in bacteria
CJ306_04240	COG0425	Belongs to the sulfur carrier protein TusA family
CJ306_04240	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
CJ306_04245	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CJ306_04245	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
CJ306_04250	COG0425	Belongs to the sulfur carrier protein TusA family
CJ306_04260	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
CJ306_04265	COG2210	Belongs to the sulfur carrier protein TusA family
CJ306_04270	COG0730	response to heat
CJ306_04280	COG1316	TRANSCRIPTIONal
CJ306_04285	COG0604	alcohol dehydrogenase
CJ306_04290	COG1283	sodium-dependent phosphate transmembrane transporter activity
CJ306_04310	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
CJ306_04310	COG3711	transcriptional antiterminator
CJ306_04315	COG1447	Phosphotransferase system cellobiose-specific component IIA
CJ306_04320	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CJ306_04340	COG1388	LysM domain
CJ306_04340	COG3584	3D domain protein
CJ306_04345	COG0577	efflux transmembrane transporter activity
CJ306_04350	COG1136	(ABC) transporter
CJ306_04360	COG5522	Integral membrane protein (intg_mem_TP0381)
CJ306_04375	COG1114	Component of the transport system for branched-chain amino acids
CJ306_04380	COG3546	catalase activity
CJ306_04415	COG0586	Pfam SNARE associated Golgi protein
CJ306_04450	COG0531	amino acid
CJ306_04455	COG0475	glutathione-regulated potassium exporter activity
CJ306_04465	COG1737	Transcriptional regulator
CJ306_04475	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CJ306_04475	COG1263	PTS System
CJ306_04485	COG2259	Doxx family
CJ306_04505	COG1522	sequence-specific DNA binding
CJ306_04510	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
CJ306_04510	COG0165	Argininosuccinate lyase
CJ306_04515	COG1028	Short-chain dehydrogenase reductase Sdr
CJ306_04525	COG2076	Multidrug Resistance protein
CJ306_04535	COG1309	transcriptional regulator
CJ306_04540	COG2814	Major facilitator Superfamily
CJ306_04550	COG1733	regulation of RNA biosynthetic process
CJ306_04560	COG2249	NAD(P)H dehydrogenase (quinone) activity
CJ306_04565	COG4533	DNA binding
CJ306_04570	COG2211	Major facilitator Superfamily
CJ306_04580	COG0693	protein deglycase activity
CJ306_04585	COG0693	protein deglycase activity
CJ306_04585	COG0753	catalase activity
CJ306_04595	COG0531	amino acid
CJ306_04610	COG1012	belongs to the aldehyde dehydrogenase family
CJ306_04630	COG1132	(ABC) transporter
CJ306_04635	COG1132	(ABC) transporter
CJ306_04645	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CJ306_04650	COG0765	amino acid transport
CJ306_04655	COG1126	abc transporter atp-binding protein
CJ306_04670	COG0189	ligase activity
CJ306_04700	COG0028	Belongs to the TPP enzyme family
CJ306_04705	COG3527	Alpha-acetolactate decarboxylase
CJ306_04715	COG0561	phosphatase activity
CJ306_04725	COG3409	Peptidoglycan-binding domain 1 protein
CJ306_04725	COG5632	N-Acetylmuramoyl-L-alanine amidase
CJ306_04730	COG0635	Involved in the biosynthesis of porphyrin-containing compound
CJ306_04740	COG0318	PFAM AMP-dependent synthetase and ligase
CJ306_04755	COG0659	secondary active sulfate transmembrane transporter activity
CJ306_04760	COG2244	polysaccharide biosynthetic process
CJ306_04780	COG1024	Enoyl-CoA hydratase
CJ306_04800	COG1363	Peptidase, m42
CJ306_04835	COG0601	transmembrane transport
CJ306_04840	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CJ306_04845	COG0444	Belongs to the ABC transporter superfamily
CJ306_04850	COG4608	Belongs to the ABC transporter superfamily
CJ306_04860	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CJ306_05025	COG0477	Major facilitator Superfamily
CJ306_05030	COG3290	protein histidine kinase activity
CJ306_05035	COG4565	transcriptional regulatory protein
CJ306_05040	COG3181	Tripartite tricarboxylate transporter family receptor
CJ306_05045	COG0494	nUDIX hydrolase
CJ306_05060	COG0305	Participates in initiation and elongation during chromosome replication
CJ306_05085	COG0477	Major facilitator Superfamily
CJ306_05100	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CJ306_05125	COG1073	alpha beta
CJ306_05175	COG1183	phosphatidylcholine synthase activity
CJ306_05190	COG2376	Dihydroxyacetone kinase
CJ306_05200	COG2376	Dihydroxyacetone kinase
CJ306_05210	COG1959	2 iron, 2 sulfur cluster binding
CJ306_05260	COG1388	LysM domain
CJ306_05260	COG3584	3D domain protein
CJ306_05265	COG0791	NLP P60 protein
CJ306_05265	COG1388	LysM domain
CJ306_05275	COG2373	Large extracellular alpha-helical protein
CJ306_05325	COG3237	CsbD-like
CJ306_05350	COG1191	sigma factor activity
CJ306_05360	COG2208	phosphoserine phosphatase activity
CJ306_05365	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
CJ306_05370	COG0784	Response regulator, receiver
CJ306_05370	COG5002	protein histidine kinase activity
CJ306_05370	COG2205	protein histidine kinase activity
CJ306_05395	COG0393	Putative heavy-metal-binding
CJ306_05415	COG3049	Linear amide C-N hydrolases, choloylglycine hydrolase family
CJ306_05435	COG0420	3'-5' exonuclease activity
CJ306_05440	COG4717	serine-type aminopeptidase activity
CJ306_05450	COG0346	lactoylglutathione lyase activity
CJ306_05455	COG0346	lactoylglutathione lyase activity
CJ306_05460	COG0457	Tetratricopeptide repeat
CJ306_05470	COG2267	carboxylic ester hydrolase activity
CJ306_05495	COG2140	Oxalate decarboxylase
CJ306_05505	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
CJ306_05510	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
CJ306_05520	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
CJ306_05525	COG1695	Transcriptional regulator
CJ306_05565	COG3973	AAA domain
CJ306_05600	COG4980	gas vesicle protein
CJ306_05605	COG0537	adenosine 5'-monophosphoramidase activity
CJ306_05615	COG1131	(ABC) transporter
CJ306_05620	COG4473	ABC transporter
CJ306_05645	COG3402	PFAM membrane-flanked domain
CJ306_05650	COG3428	Bacterial PH domain
CJ306_05680	COG0697	spore germination
CJ306_05685	COG3402	PFAM membrane-flanked domain
CJ306_05690	COG3428	Bacterial PH domain
CJ306_05700	COG2329	Antibiotic biosynthesis monooxygenase
CJ306_05705	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
CJ306_05755	COG1309	transcriptional regulator
CJ306_05760	COG1511	domain protein
CJ306_05780	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CJ306_05790	COG2378	regulation of single-species biofilm formation
CJ306_05795	COG1609	Transcriptional regulator
CJ306_05805	COG1234	tRNA 3'-trailer cleavage
CJ306_05810	COG0095	Lipoate-protein ligase
CJ306_05820	COG0318	PFAM AMP-dependent synthetase and ligase
CJ306_05960	COG1408	metallophosphoesterase
CJ306_05965	COG1078	dGTPase activity
CJ306_05970	COG1595	DNA-templated transcription, initiation
CJ306_05975	COG3708	Transcriptional regulator
CJ306_05975	COG2207	Transcriptional regulator
CJ306_05985	COG2205	protein histidine kinase activity
CJ306_05990	COG0745	RESPONSE REGULATOR receiver
CJ306_06010	COG0501	Belongs to the peptidase M48B family
CJ306_06015	COG0840	transmembrane signaling receptor activity
CJ306_06020	COG3693	PFAM glycoside hydrolase, family 10
CJ306_06030	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
CJ306_06035	COG2224	Isocitrate lyase
CJ306_06060	COG1278	Cold shock
CJ306_06080	COG0398	Pfam SNARE associated Golgi protein
CJ306_06140	COG0179	Fumarylacetoacetate (FAA) hydrolase
CJ306_06165	COG0367	asparagine synthase
CJ306_06175	COG0753	catalase activity
CJ306_06180	COG0004	ammonium transporteR
CJ306_06205	COG2996	Protein conserved in bacteria
CJ306_06220	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CJ306_06235	COG0561	phosphatase activity
CJ306_06260	COG2267	carboxylic ester hydrolase activity
CJ306_06280	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
CJ306_06285	COG5504	Zn-dependent protease
CJ306_06300	COG0180	Tryptophanyl-tRNA synthetase
CJ306_06315	COG4166	transmembrane transport
CJ306_06320	COG0601	transmembrane transport
CJ306_06325	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CJ306_06330	COG0444	Belongs to the ABC transporter superfamily
CJ306_06335	COG4608	Belongs to the ABC transporter superfamily
CJ306_06340	COG0534	Mate efflux family protein
CJ306_06345	COG4166	transmembrane transport
CJ306_06360	COG1393	Belongs to the ArsC family
CJ306_06365	COG0861	Integral membrane protein TerC family
CJ306_06385	COG1164	Oligoendopeptidase f
CJ306_06400	COG2346	COG2346, Truncated hemoglobins
CJ306_06405	COG4116	CYTH
CJ306_06415	COG2357	RelA SpoT domain protein
CJ306_06425	COG0564	pseudouridine synthase activity
CJ306_06440	COG0772	Belongs to the SEDS family
CJ306_06445	COG1216	Glycosyl transferase, family 2
CJ306_06465	COG0463	Glycosyl transferase, family 2
CJ306_06465	COG0457	Tetratricopeptide repeat
CJ306_06485	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
CJ306_06500	COG1091	dTDP-4-dehydrorhamnose reductase activity
CJ306_06545	COG2153	protein acetylation
CJ306_06555	COG2382	esterase
CJ306_06575	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
CJ306_06590	COG0512	Glutamine amidotransferase of anthranilate synthase
CJ306_06590	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
CJ306_06625	COG1620	l-lactate permease
CJ306_06630	COG5634	Uncharacterized conserved protein (DUF2278)
CJ306_06685	COG0508	dehydrogenase complex catalyzes the overall conversion of
CJ306_06695	COG1476	TRANSCRIPTIONal
CJ306_06755	COG1686	Belongs to the peptidase S11 family
CJ306_06760	COG0681	Belongs to the peptidase S26 family
CJ306_06795	COG1012	belongs to the aldehyde dehydrogenase family
CJ306_06805	COG1176	ABC-type spermidine putrescine transport system, permease component I
CJ306_06810	COG1177	transmembrane transport
CJ306_06815	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
CJ306_06825	COG2409	Drug exporters of the RND superfamily
CJ306_06835	COG0564	pseudouridine synthase activity
CJ306_06845	COG2340	Cysteine-rich secretory protein family
CJ306_06850	COG0247	lactate metabolic process
CJ306_06855	COG0277	FAD linked oxidase domain protein
CJ306_06860	COG3835	regulator
CJ306_06870	COG0745	RESPONSE REGULATOR receiver
CJ306_06875	COG5002	protein histidine kinase activity
CJ306_06880	COG2186	Transcriptional regulator
CJ306_06900	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
CJ306_06910	COG2116	formate transmembrane transporter activity
CJ306_06915	COG0861	Integral membrane protein TerC family
CJ306_06920	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
CJ306_06935	COG2030	dehydratase
CJ306_06955	COG1028	Short-chain dehydrogenase reductase Sdr
CJ306_06960	COG3243	poly(R)-hydroxyalkanoic acid synthase
CJ306_06970	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
CJ306_06990	COG1840	ABC-type Fe3 transport system, periplasmic component
CJ306_06995	COG3842	ATPase activity
CJ306_07020	COG1349	DNA-binding transcription factor activity
CJ306_07035	COG0235	Class ii aldolase
CJ306_07045	COG2861	carbohydrate metabolic process
CJ306_07055	COG3852	Histidine kinase
CJ306_07060	COG1846	Transcriptional regulator
CJ306_07070	COG2318	DinB family
CJ306_07080	COG5002	protein histidine kinase activity
CJ306_07090	COG0720	synthase
CJ306_07105	COG4873	Protein conserved in bacteria
CJ306_07140	COG1780	Probably involved in ribonucleotide reductase function
CJ306_07170	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
CJ306_07175	COG1725	Transcriptional regulator
CJ306_07180	COG1131	(ABC) transporter
CJ306_07190	COG1131	(ABC) transporter
CJ306_07210	COG1522	sequence-specific DNA binding
CJ306_07220	COG1335	isochorismatase
CJ306_07230	COG1619	proteins homologs of microcin C7 resistance protein MccF
CJ306_07235	COG2070	2-Nitropropane dioxygenase
CJ306_07240	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
CJ306_07250	COG1696	Membrane protein involved in D-alanine export
CJ306_07275	COG0716	FMN binding
CJ306_07335	COG1846	Transcriptional regulator
CJ306_07345	COG1301	dicarboxylic acid transport
CJ306_07350	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
CJ306_07355	COG4709	membrane
CJ306_07360	COG3874	Sporulation protein YtfJ
CJ306_07390	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
CJ306_07395	COG0028	Belongs to the TPP enzyme family
CJ306_07400	COG0440	acetolactate synthase activity
CJ306_07475	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
CJ306_07490	COG1183	phosphatidylcholine synthase activity
CJ306_07495	COG1368	sulfuric ester hydrolase activity
CJ306_07505	COG0019	diaminopimelate decarboxylase activity
CJ306_07525	COG0529	Catalyzes the synthesis of activated sulfate
CJ306_07530	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
CJ306_07550	COG1648	precorrin-2 dehydrogenase activity
CJ306_07560	COG0733	neurotransmitter:sodium symporter activity
CJ306_07580	COG1757	Na H antiporter
CJ306_07595	COG4758	membrane
CJ306_07600	COG4585	Histidine kinase
CJ306_07605	COG2197	response regulator
CJ306_07615	COG1114	Component of the transport system for branched-chain amino acids
CJ306_07670	COG0730	response to heat
CJ306_07675	COG0306	phosphate transporter
CJ306_07680	COG1392	Phosphate transport regulator
CJ306_07685	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
CJ306_07700	COG3852	Histidine kinase
CJ306_07705	COG1801	Protein of unknown function DUF72
CJ306_07715	COG0582	viral genome integration into host DNA
CJ306_07720	COG5002	protein histidine kinase activity
CJ306_07735	COG0392	lysyltransferase activity
CJ306_07735	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
CJ306_07750	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
CJ306_07755	COG1686	Belongs to the peptidase S11 family
CJ306_07760	COG2715	membrane protein required for spore maturation
CJ306_07765	COG0700	Nucleoside recognition
CJ306_07770	COG1187	pseudouridine synthase activity
CJ306_07780	COG1333	cytochrome c biogenesis protein
CJ306_07785	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
CJ306_07790	COG0745	RESPONSE REGULATOR receiver
CJ306_07795	COG5002	protein histidine kinase activity
CJ306_07800	COG2096	Adenosyltransferase
CJ306_07815	COG3601	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
CJ306_07820	COG1141	Ferredoxin
CJ306_07830	COG0514	ATP-dependent DNA helicase (RecQ)
CJ306_07835	COG1266	CAAX protease self-immunity
CJ306_07845	COG1408	metallophosphoesterase
CJ306_07850	COG0789	Transcriptional regulator
CJ306_07860	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
CJ306_07880	COG0492	ferredoxin-NADP+ reductase activity
CJ306_07885	COG0252	asparaginase activity
CJ306_07955	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
CJ306_07970	COG0142	geranyltranstransferase activity
CJ306_07980	COG0142	geranyltranstransferase activity
CJ306_08005	COG0457	Tetratricopeptide repeat
CJ306_08025	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
CJ306_08030	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
CJ306_08030	COG2010	Cytochrome c
CJ306_08035	COG4347	Protein of unknown function (DUF1405)
CJ306_08050	COG2738	Putative neutral zinc metallopeptidase
CJ306_08060	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CJ306_08070	COG1694	Mazg nucleotide pyrophosphohydrolase
CJ306_08090	COG0438	transferase activity, transferring glycosyl groups
CJ306_08130	COG1199	ATP-dependent helicase activity
CJ306_08130	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
CJ306_08150	COG3935	DnaD domain protein
CJ306_08155	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
CJ306_08165	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
CJ306_08165	COG4499	WXG100 protein secretion system (Wss), protein YukC
CJ306_08225	COG0116	Belongs to the methyltransferase superfamily
CJ306_08235	COG1199	ATP-dependent helicase activity
CJ306_08240	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
CJ306_08250	COG0024	Methionine aminopeptidase
CJ306_08260	COG2233	PERMEase
CJ306_08265	COG2311	Membrane
CJ306_08275	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
CJ306_08285	COG0456	acetyltransferase
CJ306_08330	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
CJ306_08335	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
CJ306_08350	COG3944	biosynthesis protein
CJ306_08360	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
CJ306_08375	COG1215	transferase activity, transferring glycosyl groups
CJ306_08380	COG0438	transferase activity, transferring glycosyl groups
CJ306_08395	COG0454	-acetyltransferase
CJ306_08415	COG0328	RNA-DNA hybrid ribonuclease activity
CJ306_08450	COG3403	YqcI/YcgG family
CJ306_08455	COG1280	lysine exporter protein (LysE YggA)
CJ306_08475	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
CJ306_08480	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
CJ306_08490	COG0475	glutathione-regulated potassium exporter activity
CJ306_08495	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
CJ306_08500	COG4978	Transcriptional regulator
CJ306_08500	COG0789	Transcriptional regulator
CJ306_08515	COG2323	membrane
CJ306_08520	COG1434	Gram-negative-bacterium-type cell wall biogenesis
CJ306_08555	COG1923	regulation of RNA biosynthetic process
CJ306_08565	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
CJ306_08570	COG1360	Flagellar Motor Protein
CJ306_08575	COG2201	protein-glutamate methylesterase activity
CJ306_08580	COG0643	Histidine kinase
CJ306_08580	COG2198	Histidine kinase
CJ306_08585	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
CJ306_08585	COG1776	CheC inhibitor of MCP methylation
CJ306_08600	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
CJ306_08620	COG1256	bacterial-type flagellum assembly
CJ306_08625	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
CJ306_08630	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
CJ306_08645	COG1815	bacterial-type flagellum-dependent cell motility
CJ306_08650	COG1558	bacterial-type flagellum-dependent cell motility
CJ306_08655	COG1677	Flagellar hook-basal body complex protein FliE
CJ306_08660	COG1766	The M ring may be actively involved in energy transduction
CJ306_08665	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
CJ306_08675	COG1157	protein secretion by the type III secretion system
CJ306_08695	COG1749	Flagellar hook protein flgE
CJ306_08710	COG0784	Response regulator, receiver
CJ306_08710	COG0835	chemotaxis
CJ306_08720	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
CJ306_08725	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
CJ306_08730	COG0741	lytic transglycosylase activity
CJ306_08740	COG1868	FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
CJ306_08745	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
CJ306_08745	COG1776	CheC inhibitor of MCP methylation
CJ306_08755	COG1338	Plays a role in the flagellum-specific transport system
CJ306_08760	COG1987	bacterial-type flagellum assembly
CJ306_08770	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
CJ306_08775	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
CJ306_08780	COG1419	protein localization to endoplasmic reticulum
CJ306_08785	COG4786	Flagellar basal body rod
CJ306_08790	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
CJ306_08825	COG2329	Antibiotic biosynthesis monooxygenase
CJ306_08855	COG3842	ATPase activity
CJ306_08865	COG1177	transmembrane transport
CJ306_08870	COG1234	tRNA 3'-trailer cleavage
CJ306_08900	COG0406	alpha-ribazole phosphatase activity
CJ306_08930	COG0367	asparagine synthase
CJ306_08960	COG1802	Transcriptional regulator
CJ306_08965	COG0697	spore germination
CJ306_08975	COG0523	cobalamin synthesis protein
CJ306_08980	COG0701	Predicted permease
CJ306_08995	COG1757	Na H antiporter
CJ306_09000	COG0789	Transcriptional regulator
CJ306_09025	COG0534	Mate efflux family protein
CJ306_09030	COG3340	Belongs to the peptidase S51 family
CJ306_09050	COG0785	Cytochrome C biogenesis protein
CJ306_09065	COG0457	Tetratricopeptide repeat
CJ306_09085	COG2733	membrane
CJ306_09125	COG1131	(ABC) transporter
CJ306_09140	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CJ306_09145	COG0528	UMP kinase activity
CJ306_09170	COG1027	Aspartate ammonia-lyase
CJ306_09175	COG0281	malic enzyme
CJ306_09180	COG4191	Histidine kinase
CJ306_09185	COG0784	Response regulator, receiver
CJ306_09190	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
CJ306_09245	COG2814	Major facilitator Superfamily
CJ306_09260	COG1695	Transcriptional regulator
CJ306_09270	COG0477	Major facilitator Superfamily
CJ306_09280	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
CJ306_09285	COG2223	nitrite transmembrane transporter activity
CJ306_09290	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
CJ306_09310	COG0733	neurotransmitter:sodium symporter activity
CJ306_09320	COG5566	PFAM Mor transcription activator
CJ306_09325	COG2323	membrane
CJ306_09350	COG2084	Dehydrogenase
CJ306_09370	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
CJ306_09380	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
CJ306_09385	COG0028	Belongs to the TPP enzyme family
CJ306_09405	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
CJ306_09430	COG2814	Major facilitator Superfamily
CJ306_09435	COG3384	dioxygenase
CJ306_09445	COG3279	Response regulator of the LytR AlgR family
CJ306_09450	COG0427	acetyl-CoA hydrolase
CJ306_09470	COG2814	Major facilitator Superfamily
CJ306_09475	COG1309	transcriptional regulator
CJ306_09480	COG1028	Short-chain dehydrogenase reductase Sdr
CJ306_09495	COG0457	Tetratricopeptide repeat
CJ306_09505	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
CJ306_09515	COG4166	transmembrane transport
CJ306_09520	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CJ306_09540	COG1914	H( )-stimulated, divalent metal cation uptake system
CJ306_09560	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
CJ306_09565	COG0531	amino acid
CJ306_09600	COG2309	aminopeptidase activity
CJ306_09615	COG0456	acetyltransferase
CJ306_09635	COG1309	transcriptional regulator
CJ306_09640	COG2390	Transcriptional regulator
CJ306_09650	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
CJ306_09655	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
CJ306_09665	COG4846	Membrane protein involved in cytochrome C biogenesis
CJ306_09675	COG0006	proline dipeptidase activity
CJ306_09685	COG2132	Multicopper oxidase
CJ306_09715	COG1114	Component of the transport system for branched-chain amino acids
CJ306_09725	COG1910	domain protein
CJ306_09745	COG2318	DinB family
CJ306_09755	COG1280	lysine exporter protein (LysE YggA)
CJ306_09760	COG3403	YqcI/YcgG family
CJ306_09775	COG0725	ABC transporter, periplasmic molybdate-binding protein
CJ306_09780	COG0561	phosphatase activity
CJ306_09785	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
CJ306_09795	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
CJ306_09800	COG1028	Short-chain dehydrogenase reductase Sdr
CJ306_09825	COG1276	copper resistance
CJ306_09825	COG2372	response to copper ion
CJ306_09830	COG4549	nuclear export factor GLE1
CJ306_09835	COG0697	spore germination
CJ306_09840	COG0583	DNA-binding transcription factor activity
CJ306_09845	COG1959	2 iron, 2 sulfur cluster binding
CJ306_09850	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
CJ306_09855	COG0778	Nitroreductase
CJ306_09870	COG0628	permease
CJ306_09880	COG1231	oxidoreductase activity
CJ306_09890	COG0523	cobalamin synthesis protein
CJ306_09900	COG0411	ABC transporter
CJ306_09920	COG0583	DNA-binding transcription factor activity
CJ306_09955	COG1271	oxidase subunit
CJ306_09960	COG1294	oxidase, subunit
CJ306_09965	COG4988	ABC transporter
CJ306_09970	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
CJ306_10020	COG1686	Belongs to the peptidase S11 family
CJ306_10035	COG0791	NLP P60 protein
CJ306_10035	COG1388	LysM domain
CJ306_10045	COG1132	(ABC) transporter
CJ306_10050	COG0745	RESPONSE REGULATOR receiver
CJ306_10055	COG5002	protein histidine kinase activity
CJ306_10065	COG0300	oxidoreductase activity
CJ306_10075	COG0726	polysaccharide deacetylase
CJ306_10095	COG0460	homoserine dehydrogenase
CJ306_10120	COG1316	TRANSCRIPTIONal
CJ306_10130	COG0745	RESPONSE REGULATOR receiver
CJ306_10135	COG5002	protein histidine kinase activity
CJ306_10140	COG0726	polysaccharide deacetylase
CJ306_10150	COG1285	pathogenesis
CJ306_10155	COG1247	-acetyltransferase
CJ306_10165	COG4264	IucA IucC family
CJ306_10170	COG0318	PFAM AMP-dependent synthetase and ligase
CJ306_10185	COG1082	Xylose isomerase domain protein TIM barrel
CJ306_10195	COG2814	Major facilitator Superfamily
CJ306_10200	COG1279	arginine transmembrane transporter activity
CJ306_10205	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CJ306_10215	COG1752	Esterase of the alpha-beta hydrolase superfamily
CJ306_10250	COG0577	efflux transmembrane transporter activity
CJ306_10255	COG2002	toxin-antitoxin pair type II binding
CJ306_10260	COG1404	Belongs to the peptidase S8 family
CJ306_10265	COG0640	Transcriptional regulator
CJ306_10270	COG0667	Aldo Keto reductase
CJ306_10275	COG2814	Major facilitator Superfamily
CJ306_10285	COG3152	Membrane
CJ306_10310	COG0840	transmembrane signaling receptor activity
CJ306_10330	COG3949	Membrane
CJ306_10335	COG0783	Belongs to the Dps family
CJ306_10350	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CJ306_10360	COG1231	oxidoreductase activity
CJ306_10365	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CJ306_10370	COG4989	oxidoreductase activity
CJ306_10380	COG0523	cobalamin synthesis protein
CJ306_10385	COG0456	acetyltransferase
CJ306_10390	COG0803	Belongs to the bacterial solute-binding protein 9 family
CJ306_10400	COG0702	epimerase
CJ306_10410	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
CJ306_10420	COG4166	transmembrane transport
CJ306_10445	COG5337	Spore coat protein CotH
CJ306_10450	COG1051	belongs to the nudix hydrolase family
CJ306_10455	COG0586	Pfam SNARE associated Golgi protein
CJ306_10460	COG2244	polysaccharide biosynthetic process
CJ306_10470	COG0701	Predicted permease
CJ306_10475	COG3689	TIGRFAM TIGR03943 family protein
CJ306_10480	COG1607	acyl-coa hydrolase
CJ306_10490	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CJ306_10505	COG0702	epimerase
CJ306_10510	COG2839	Protein conserved in bacteria
CJ306_10515	COG1253	flavin adenine dinucleotide binding
CJ306_10530	COG1114	Component of the transport system for branched-chain amino acids
CJ306_10535	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
CJ306_10555	COG0860	N-Acetylmuramoyl-L-alanine amidase
CJ306_10565	COG1876	peptidase activity
CJ306_10575	COG0154	amidase activity
CJ306_10580	COG2211	Major facilitator Superfamily
CJ306_10610	COG0561	phosphatase activity
CJ306_10625	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
CJ306_10645	COG1819	glycosyl
CJ306_10650	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CJ306_10655	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CJ306_10685	COG0456	acetyltransferase
CJ306_10705	COG1511	domain protein
CJ306_10705	COG0842	Transport permease protein
CJ306_10720	COG4499	WXG100 protein secretion system (Wss), protein YukC
CJ306_10825	COG3874	Sporulation protein YtfJ
CJ306_10850	COG2226	methyltransferase
CJ306_10870	COG1082	Xylose isomerase domain protein TIM barrel
CJ306_10875	COG0346	lactoylglutathione lyase activity
CJ306_10885	COG0604	alcohol dehydrogenase
CJ306_10890	COG1595	DNA-templated transcription, initiation
CJ306_10905	COG0426	domain, Protein
CJ306_10905	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
CJ306_10915	COG0386	Belongs to the glutathione peroxidase family
CJ306_10920	COG1305	Transglutaminase-like
CJ306_10925	COG1721	protein (some members contain a von Willebrand factor type A (vWA) domain
CJ306_10930	COG0714	Associated with various cellular activities
CJ306_10935	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
CJ306_10940	COG1140	nitrate reductase beta subunit
CJ306_10945	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
CJ306_10950	COG2181	nitrate reductase activity
CJ306_10955	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
CJ306_10960	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
CJ306_10965	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
CJ306_10970	COG0303	'Molybdopterin
CJ306_10975	COG0314	molybdopterin synthase activity
CJ306_10985	COG2223	nitrite transmembrane transporter activity
CJ306_11005	COG1648	precorrin-2 dehydrogenase activity
CJ306_11015	COG1587	Uroporphyrinogen-III synthase
CJ306_11015	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
CJ306_11020	COG2146	nitrite reductase [NAD(P)H] activity
CJ306_11025	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
CJ306_11030	COG2846	Di-iron-containing protein involved in the repair of iron-sulfur clusters
CJ306_11065	COG2359	stage V sporulation protein S
CJ306_11090	COG0457	Tetratricopeptide repeat
CJ306_11105	COG2856	Zn peptidase
CJ306_11115	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
CJ306_11130	COG1396	sequence-specific DNA binding
CJ306_11215	COG0582	viral genome integration into host DNA
CJ306_11245	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
CJ306_11255	COG5484	DNA packaging
CJ306_11260	COG1783	phage Terminase large subunit
CJ306_11275	COG0338	D12 class N6 adenine-specific DNA methyltransferase
CJ306_11410	COG0457	Tetratricopeptide repeat
CJ306_11425	COG1418	mRNA catabolic process
CJ306_11430	COG0488	(ABC) transporter
CJ306_11460	COG1413	lyase activity
CJ306_11475	COG2521	methyltransferase
CJ306_11475	COG2136	Putative SAM-dependent methyltransferase
CJ306_11480	COG0018	arginyl-trna synthetase
CJ306_11525	COG0017	Asparaginyl-tRNA synthetase
CJ306_11530	COG0733	neurotransmitter:sodium symporter activity
CJ306_11555	COG2610	gluconate transmembrane transporter activity
CJ306_11565	COG1794	racemase activity, acting on amino acids and derivatives
CJ306_11575	COG0456	acetyltransferase
CJ306_11585	COG3655	Transcriptional regulator
CJ306_11590	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
CJ306_11600	COG1131	(ABC) transporter
CJ306_11605	COG4473	ABC transporter
CJ306_11615	COG0546	phosphoglycolate phosphatase activity
CJ306_11630	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
CJ306_11645	COG0768	penicillin binding
CJ306_11655	COG0204	Acyl-transferase
CJ306_11660	COG1272	protein, Hemolysin III
CJ306_11670	COG0805	protein transport
CJ306_11680	COG1307	EDD domain protein, DegV family
CJ306_11690	COG1999	signal sequence binding
CJ306_11695	COG0071	Belongs to the small heat shock protein (HSP20) family
CJ306_11700	COG0367	asparagine synthase
CJ306_11715	COG0860	N-Acetylmuramoyl-L-alanine amidase
CJ306_11720	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CJ306_11725	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
CJ306_11745	COG1335	isochorismatase
CJ306_11760	COG0668	transmembrane transport
CJ306_11765	COG2203	Gaf domain
CJ306_11765	COG4585	Histidine kinase
CJ306_11770	COG2197	response regulator
CJ306_11775	COG1737	Transcriptional regulator
CJ306_11780	COG0384	phenazine biosynthesis protein PhzF
CJ306_11785	COG1064	alcohol dehydrogenase
CJ306_11810	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
CJ306_11845	COG0517	IMP dehydrogenase activity
CJ306_11845	COG1125	glycine betaine transport
CJ306_11850	COG1174	glycine betaine transport
CJ306_11885	COG1253	flavin adenine dinucleotide binding
CJ306_11890	COG1012	belongs to the aldehyde dehydrogenase family
CJ306_11895	COG5506	Protein of unknown function (DUF1694)
CJ306_11915	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
CJ306_11920	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
CJ306_11925	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
CJ306_11930	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
CJ306_11935	COG0456	acetyltransferase
CJ306_11940	COG3829	transcription factor binding
CJ306_11945	COG1509	lysine 2,3-aminomutase activity
CJ306_11980	COG0515	serine threonine protein kinase
CJ306_11980	COG4991	sh3 domain protein
CJ306_11980	COG3064	Membrane
CJ306_11990	COG0671	phosphoesterase, PA-phosphatase related
CJ306_11995	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
CJ306_12000	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CJ306_12100	COG0300	oxidoreductase activity
CJ306_12120	COG4499	WXG100 protein secretion system (Wss), protein YukC
CJ306_12120	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
CJ306_12130	COG2814	Major facilitator Superfamily
CJ306_12135	COG4841	protein insertion into membrane
CJ306_12140	COG0372	Belongs to the citrate synthase family
CJ306_12145	COG2079	MmgE PrpD family protein
CJ306_12150	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
CJ306_12155	COG1960	acyl-CoA dehydrogenase activity
CJ306_12160	COG2084	Dehydrogenase
CJ306_12170	COG1280	lysine exporter protein (LysE YggA)
CJ306_12175	COG1024	Enoyl-CoA hydratase
CJ306_12190	COG0420	3'-5' exonuclease activity
CJ306_12195	COG0419	ATPase involved in DNA repair
CJ306_12225	COG2223	nitrite transmembrane transporter activity
CJ306_12235	COG1028	Short-chain dehydrogenase reductase Sdr
CJ306_12240	COG1169	isochorismate synthase
CJ306_12245	COG1021	2,3-dihydroxybenzoate-AMP ligase
CJ306_12250	COG1535	isochorismatase
CJ306_12250	COG3433	isochorismatase activity
CJ306_12255	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CJ306_12260	COG3251	PFAM MbtH domain protein
CJ306_12265	COG2814	Major facilitator Superfamily
CJ306_12280	COG0776	regulation of translation
CJ306_12290	COG2318	DinB family
CJ306_12300	COG1115	amino acid carrier protein
CJ306_12320	COG1187	pseudouridine synthase activity
CJ306_12325	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
CJ306_12330	COG1136	(ABC) transporter
CJ306_12380	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
CJ306_12395	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CJ306_12440	COG1247	-acetyltransferase
CJ306_12475	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CJ306_12505	COG0583	DNA-binding transcription factor activity
CJ306_12510	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
CJ306_12530	COG0583	DNA-binding transcription factor activity
CJ306_12535	COG2258	MOSC domain
CJ306_12550	COG1132	(ABC) transporter
CJ306_12555	COG1132	(ABC) transporter
CJ306_12585	COG0582	viral genome integration into host DNA
CJ306_12605	COG1396	sequence-specific DNA binding
CJ306_12615	COG3646	Phage regulatory protein
CJ306_12615	COG3645	SOS response
CJ306_12640	COG1484	DNA-dependent DNA replication
CJ306_12650	COG2002	toxin-antitoxin pair type II binding
CJ306_12715	COG0582	viral genome integration into host DNA
CJ306_12820	COG3170	Tfp pilus assembly protein FimV
CJ306_12845	COG4824	toxin secretion phage lysis holin
CJ306_12850	COG1388	LysM domain
CJ306_12850	COG3409	Peptidoglycan-binding domain 1 protein
CJ306_12850	COG5632	N-Acetylmuramoyl-L-alanine amidase
CJ306_12865	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
CJ306_12915	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
CJ306_12920	COG1595	DNA-templated transcription, initiation
CJ306_12955	COG1649	PFAM Uncharacterised BCR, COG1649
CJ306_12980	COG2971	BadF BadG BcrA BcrD
CJ306_12990	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
CJ306_13000	COG1846	Transcriptional regulator
CJ306_13045	COG1309	transcriptional regulator
CJ306_13155	COG0500	methyltransferase
CJ306_13155	COG3615	Tellurite resistance protein tehB
CJ306_13165	COG2226	methyltransferase
CJ306_13170	COG3961	Belongs to the TPP enzyme family
CJ306_13175	COG1846	Transcriptional regulator
CJ306_13210	COG2195	Cleaves the N-terminal amino acid of tripeptides
CJ306_13245	COG2002	toxin-antitoxin pair type II binding
CJ306_13255	COG0730	response to heat
CJ306_13260	COG0110	maltose O-acetyltransferase activity
CJ306_13265	COG1686	Belongs to the peptidase S11 family
CJ306_13280	COG2814	Major facilitator Superfamily
CJ306_13315	COG2312	Erythromycin esterase
CJ306_13325	COG0741	lytic transglycosylase activity
CJ306_13330	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CJ306_13395	COG1309	transcriptional regulator
CJ306_13420	COG0577	efflux transmembrane transporter activity
CJ306_13425	COG1136	(ABC) transporter
CJ306_13460	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
CJ306_13465	COG0768	penicillin binding
CJ306_13470	COG1595	DNA-templated transcription, initiation
CJ306_13480	COG0768	penicillin binding
CJ306_13495	COG1408	metallophosphoesterase
CJ306_13505	COG1131	(ABC) transporter
CJ306_13515	COG1309	transcriptional regulator
CJ306_13530	COG1960	acyl-CoA dehydrogenase activity
CJ306_13535	COG0439	Biotin carboxylase
CJ306_13540	COG0511	ligase activity, forming carbon-carbon bonds
CJ306_13545	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
CJ306_13550	COG1024	Enoyl-CoA hydratase
CJ306_13555	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
CJ306_13560	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
CJ306_13600	COG1686	Belongs to the peptidase S11 family
CJ306_13630	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
CJ306_13645	COG3227	Zinc metalloprotease (Elastase)
CJ306_13650	COG2207	Transcriptional regulator
CJ306_13680	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
CJ306_13690	COG2814	Major facilitator Superfamily
CJ306_13695	COG1028	Short-chain dehydrogenase reductase Sdr
CJ306_13700	COG1733	regulation of RNA biosynthetic process
CJ306_13745	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CJ306_13765	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
CJ306_13785	COG1384	Belongs to the class-I aminoacyl-tRNA synthetase family
CJ306_13790	COG3773	Cell wall hydrolase
CJ306_13800	COG0745	RESPONSE REGULATOR receiver
CJ306_13805	COG2205	protein histidine kinase activity
CJ306_13835	COG1136	(ABC) transporter
CJ306_13840	COG0577	efflux transmembrane transporter activity
CJ306_13860	COG0460	homoserine dehydrogenase
CJ306_13865	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CJ306_13875	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
CJ306_13905	COG0582	viral genome integration into host DNA
CJ306_13945	COG2002	toxin-antitoxin pair type II binding
CJ306_14030	COG0582	viral genome integration into host DNA
CJ306_14060	COG4626	Terminase
CJ306_14060	COG1802	Transcriptional regulator
CJ306_14070	COG0740	serine-type endopeptidase activity
CJ306_14130	COG4824	toxin secretion phage lysis holin
CJ306_14180	COG2124	cytochrome p450
CJ306_14220	COG0561	phosphatase activity
CJ306_14230	COG5002	protein histidine kinase activity
CJ306_14245	COG1819	glycosyl
CJ306_14250	COG1794	racemase activity, acting on amino acids and derivatives
CJ306_14275	COG2205	protein histidine kinase activity
CJ306_14280	COG0582	viral genome integration into host DNA
CJ306_14355	COG0604	alcohol dehydrogenase
CJ306_14360	COG0671	phosphoesterase, PA-phosphatase related
CJ306_14410	COG2814	Major facilitator Superfamily
CJ306_14430	COG0584	glycerophosphoryl diester phosphodiesterase
CJ306_14450	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CJ306_14455	COG0697	spore germination
CJ306_14500	COG2223	nitrite transmembrane transporter activity
CJ306_14515	COG0592	DNA-directed DNA polymerase activity
CJ306_14535	COG3878	Protein conserved in bacteria
CJ306_14560	COG4667	esterase of the alpha-beta hydrolase superfamily
CJ306_14600	COG0322	excinuclease ABC activity
CJ306_14635	COG1819	glycosyl
CJ306_14650	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CJ306_14685	COG0745	RESPONSE REGULATOR receiver
CJ306_14690	COG5002	protein histidine kinase activity
CJ306_14725	COG1136	(ABC) transporter
CJ306_14730	COG0577	efflux transmembrane transporter activity
CJ306_14735	COG1073	alpha beta
CJ306_14745	COG0076	glutamate decarboxylase activity
CJ306_14760	COG1523	belongs to the glycosyl hydrolase 13 family
CJ306_14765	COG3227	Zinc metalloprotease (Elastase)
CJ306_14770	COG0737	Belongs to the 5'-nucleotidase family
CJ306_14795	COG0201	protein transport
CJ306_14800	COG0697	spore germination
CJ306_14810	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
CJ306_14840	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CJ306_14855	COG2959	enzyme of heme biosynthesis
CJ306_14860	COG3773	Cell wall hydrolase
CJ306_14860	COG3409	Peptidoglycan-binding domain 1 protein
CJ306_14895	COG1309	transcriptional regulator
CJ306_14930	COG3284	Transcriptional regulator
CJ306_14950	COG1349	DNA-binding transcription factor activity
CJ306_14965	COG1959	2 iron, 2 sulfur cluster binding
CJ306_14980	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
CJ306_14985	COG0508	dehydrogenase complex catalyzes the overall conversion of
CJ306_14990	COG0022	dehydrogenase e1 component
CJ306_14995	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
CJ306_15005	COG1028	Short-chain dehydrogenase reductase Sdr
CJ306_15010	COG0456	acetyltransferase
CJ306_15010	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
CJ306_15045	COG4176	ABC-type proline glycine betaine transport system permease component
CJ306_15050	COG0517	IMP dehydrogenase activity
CJ306_15050	COG4175	Glycine betaine
CJ306_15055	COG2113	Glycine betaine
CJ306_15080	COG2153	protein acetylation
CJ306_15085	COG3397	chitin binding
CJ306_15090	COG1819	glycosyl
CJ306_15100	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
CJ306_15110	COG2205	protein histidine kinase activity
CJ306_15115	COG2226	methyltransferase
CJ306_15120	COG2315	Protein conserved in bacteria
CJ306_15160	COG0456	acetyltransferase
CJ306_15165	COG3973	AAA domain
CJ306_15180	COG0514	ATP-dependent DNA helicase (RecQ)
CJ306_15230	COG4637	Psort location Cytoplasmic, score
CJ306_15245	COG3397	chitin binding
CJ306_15260	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
CJ306_15265	COG1115	amino acid carrier protein
CJ306_15270	COG1012	belongs to the aldehyde dehydrogenase family
CJ306_15275	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
CJ306_15285	COG3938	Belongs to the proline racemase family
CJ306_15290	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CJ306_15330	COG0586	Pfam SNARE associated Golgi protein
CJ306_15340	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
CJ306_15350	COG4166	transmembrane transport
CJ306_15360	COG4948	Mandelate Racemase Muconate Lactonizing
CJ306_15375	COG0667	Aldo Keto reductase
CJ306_15420	COG5002	protein histidine kinase activity
CJ306_15420	COG3850	Histidine kinase
CJ306_15425	COG0745	RESPONSE REGULATOR receiver
CJ306_15460	COG1164	Oligoendopeptidase f
CJ306_15465	COG1307	EDD domain protein, DegV family
CJ306_15505	COG2814	Major facilitator Superfamily
CJ306_15515	COG1664	Polymer-forming cytoskeletal
CJ306_15520	COG0789	Transcriptional regulator
CJ306_15525	COG4533	DNA binding
CJ306_15530	COG2814	Major facilitator Superfamily
CJ306_15530	COG0477	Major facilitator Superfamily
CJ306_15555	COG2261	transglycosylase associated protein
CJ306_15570	COG2226	methyltransferase
CJ306_15610	COG0436	Aminotransferase
CJ306_15615	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
CJ306_15640	COG1131	(ABC) transporter
CJ306_15695	COG0628	permease
CJ306_15710	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CJ306_15715	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CJ306_15720	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
CJ306_15760	COG2746	aminoglycoside 3-N-acetyltransferase activity
CJ306_15770	COG0697	spore germination
CJ306_15780	COG2318	DinB family
CJ306_15800	COG4912	Dna alkylation repair
CJ306_15805	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
CJ306_15810	COG0346	lactoylglutathione lyase activity
CJ306_15815	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CJ306_15820	COG0726	polysaccharide deacetylase
CJ306_15830	COG0861	Integral membrane protein TerC family
CJ306_15835	COG1368	sulfuric ester hydrolase activity
CJ306_15840	COG0488	(ABC) transporter
CJ306_15850	COG1033	growth of symbiont in host cell
CJ306_15850	COG2409	Drug exporters of the RND superfamily
CJ306_15855	COG1309	transcriptional regulator
CJ306_15870	COG0287	Prephenate dehydrogenase
CJ306_15890	COG1605	Chorismate mutase
CJ306_15890	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
CJ306_15940	COG1388	LysM domain
CJ306_15940	COG3584	3D domain protein
CJ306_15950	COG0346	lactoylglutathione lyase activity
CJ306_15990	COG1172	Belongs to the binding-protein-dependent transport system permease family
CJ306_16000	COG2390	Transcriptional regulator
CJ306_16005	COG1070	Carbohydrate kinase
CJ306_16030	COG2329	Antibiotic biosynthesis monooxygenase
CJ306_16050	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
CJ306_16070	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
CJ306_16075	COG4187	Peptidase family M20/M25/M40
CJ306_16080	COG1414	Transcriptional regulator
CJ306_16090	COG0833	amino acid
CJ306_16100	COG3239	Fatty acid desaturase
CJ306_16110	COG2720	vancomycin resistance protein
CJ306_16115	COG1785	Belongs to the alkaline phosphatase family
CJ306_16125	COG3655	Transcriptional regulator
CJ306_16145	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CJ306_16150	COG0346	lactoylglutathione lyase activity
CJ306_16175	COG0714	Associated with various cellular activities
CJ306_16200	COG0463	Glycosyl transferase, family 2
CJ306_16230	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
CJ306_16235	COG0753	catalase activity
CJ306_16280	COG0714	Associated with various cellular activities
CJ306_16325	COG0778	Nitroreductase
CJ306_16330	COG1846	Transcriptional regulator
CJ306_16370	COG1725	Transcriptional regulator
CJ306_16385	COG1136	(ABC) transporter
CJ306_16410	COG0456	acetyltransferase
CJ306_16430	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CJ306_16470	COG0730	response to heat
CJ306_16480	COG0833	amino acid
CJ306_16490	COG4335	DNA alkylation repair
CJ306_16565	COG1984	allophanate hydrolase subunit 2
CJ306_16570	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
CJ306_16575	COG1414	Transcriptional regulator
CJ306_16590	COG0640	Transcriptional regulator
CJ306_16600	COG1960	acyl-CoA dehydrogenase activity
CJ306_16635	COG1633	Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME)
CJ306_16655	COG3848	Pyruvate phosphate dikinase
CJ306_16655	COG0574	Belongs to the PEP-utilizing enzyme family
CJ306_16665	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CJ306_16680	COG5577	PFAM Coat F domain
CJ306_16690	COG3403	YqcI/YcgG family
CJ306_16695	COG1280	lysine exporter protein (LysE YggA)
CJ306_16700	COG1113	amino acid transport
CJ306_16730	COG1063	alcohol dehydrogenase
CJ306_16745	COG1027	Aspartate ammonia-lyase
CJ306_16750	COG0252	asparaginase activity
CJ306_16755	COG1396	sequence-specific DNA binding
CJ306_16790	COG5002	protein histidine kinase activity
CJ306_16815	COG2207	Transcriptional regulator
CJ306_16835	COG0322	excinuclease ABC activity
CJ306_16840	COG0531	amino acid
CJ306_16845	COG1114	Component of the transport system for branched-chain amino acids
CJ306_16850	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
CJ306_16860	COG0281	malic enzyme
CJ306_16875	COG0531	amino acid
CJ306_16880	COG0697	spore germination
CJ306_16890	COG0784	Response regulator, receiver
CJ306_16895	COG4191	Histidine kinase
CJ306_16905	COG1115	amino acid carrier protein
CJ306_16940	COG0737	Belongs to the 5'-nucleotidase family
CJ306_16945	COG2267	carboxylic ester hydrolase activity
CJ306_16950	COG1335	isochorismatase
CJ306_16970	COG0583	DNA-binding transcription factor activity
CJ306_16975	COG1846	Transcriptional regulator
CJ306_16980	COG0598	Magnesium transport protein CorA
CJ306_17000	COG1073	alpha beta
CJ306_17020	COG0415	Belongs to the DNA photolyase family
CJ306_17035	COG0288	reversible hydration of carbon dioxide
CJ306_17045	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
CJ306_17050	COG5609	conserved protein (DUF2294)
CJ306_17065	COG0697	spore germination
CJ306_17070	COG0726	polysaccharide deacetylase
CJ306_17080	COG1575	Belongs to the MenA family. Type 1 subfamily
CJ306_17100	COG0798	PFAM Bile acid sodium symporter
CJ306_17105	COG0346	lactoylglutathione lyase activity
CJ306_17110	COG0640	Transcriptional regulator
CJ306_17125	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
CJ306_17130	COG3320	Male sterility
CJ306_17130	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CJ306_17140	COG2814	Major facilitator Superfamily
CJ306_17145	COG1309	transcriptional regulator
CJ306_17155	COG1522	sequence-specific DNA binding
CJ306_17170	COG0346	lactoylglutathione lyase activity
CJ306_17255	COG0745	RESPONSE REGULATOR receiver
CJ306_17260	COG3850	Histidine kinase
CJ306_17260	COG5002	protein histidine kinase activity
CJ306_17290	COG2814	Major facilitator Superfamily
CJ306_17315	COG2515	1-aminocyclopropane-1-carboxylate deaminase
CJ306_17340	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CJ306_17345	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CJ306_17355	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
CJ306_17360	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
CJ306_17380	COG0577	efflux transmembrane transporter activity
CJ306_17400	COG5002	protein histidine kinase activity
CJ306_17400	COG3850	Histidine kinase
CJ306_17410	COG2364	Membrane
CJ306_17415	COG1846	Transcriptional regulator
CJ306_17420	COG0456	acetyltransferase
CJ306_17425	COG2808	Putative FMN-binding domain
CJ306_17430	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CJ306_17440	COG1619	proteins homologs of microcin C7 resistance protein MccF
CJ306_17465	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
CJ306_17485	COG0662	Cupin 2, conserved barrel domain protein
CJ306_17495	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CJ306_17495	COG2207	Transcriptional regulator
CJ306_17515	COG3409	Peptidoglycan-binding domain 1 protein
CJ306_17515	COG5632	N-Acetylmuramoyl-L-alanine amidase
CJ306_17895	COG5444	nuclease activity
CJ306_17920	COG1876	peptidase activity
CJ306_17925	COG2843	Capsule synthesis protein
CJ306_17935	COG0477	Major facilitator Superfamily
CJ306_17950	COG1846	Transcriptional regulator
CJ306_17955	COG2814	Major facilitator Superfamily
CJ306_17970	COG2031	fatty acid transporter
CJ306_17985	COG2249	NAD(P)H dehydrogenase (quinone) activity
CJ306_18040	COG1288	antiporter activity
CJ306_18045	COG2356	endonuclease I
CJ306_18050	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
CJ306_18070	COG1733	regulation of RNA biosynthetic process
CJ306_18075	COG0778	Nitroreductase
CJ306_18110	COG1028	Short-chain dehydrogenase reductase Sdr
CJ306_18120	COG1131	(ABC) transporter
CJ306_18145	COG1011	Hydrolase
CJ306_18180	COG0180	Tryptophanyl-tRNA synthetase
CJ306_18190	COG0628	permease
CJ306_18220	COG0500	methyltransferase
CJ306_18230	COG0477	Major facilitator Superfamily
CJ306_18260	COG1253	flavin adenine dinucleotide binding
CJ306_18265	COG0789	Transcriptional regulator
CJ306_18275	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
CJ306_18300	COG0697	spore germination
CJ306_18310	COG1357	PFAM Pentapeptide repeats (8 copies)
CJ306_18315	COG3813	Protein conserved in bacteria
CJ306_18320	COG2706	6-phosphogluconolactonase activity
CJ306_18325	COG1070	Carbohydrate kinase
CJ306_18340	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
CJ306_18345	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
CJ306_18350	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
CJ306_18355	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
CJ306_18360	COG0604	alcohol dehydrogenase
CJ306_18365	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CJ306_18380	COG1028	Short-chain dehydrogenase reductase Sdr
CJ306_18400	COG0840	transmembrane signaling receptor activity
CJ306_18410	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
CJ306_18410	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
CJ306_18415	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
CJ306_18420	COG1733	regulation of RNA biosynthetic process
CJ306_18440	COG0656	L-ascorbic acid biosynthetic process
CJ306_18445	COG2814	Major facilitator Superfamily
CJ306_18480	COG0814	amino acid
CJ306_18520	COG1733	regulation of RNA biosynthetic process
CJ306_18525	COG2188	Transcriptional regulator
CJ306_18530	COG0673	inositol 2-dehydrogenase activity
CJ306_18535	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
CJ306_18540	COG1733	regulation of RNA biosynthetic process
CJ306_18545	COG1733	regulation of RNA biosynthetic process
CJ306_18570	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CJ306_18595	COG0384	phenazine biosynthesis protein PhzF
CJ306_18600	COG0318	PFAM AMP-dependent synthetase and ligase
CJ306_18605	COG2249	NAD(P)H dehydrogenase (quinone) activity
CJ306_18610	COG1733	regulation of RNA biosynthetic process
CJ306_18625	COG0726	polysaccharide deacetylase
CJ306_18635	COG1191	sigma factor activity
CJ306_18695	COG1151	hydroxylamine reductase activity
CJ306_18730	COG2072	flavoprotein involved in K transport
CJ306_18765	COG1113	amino acid transport
CJ306_18770	COG2814	Major facilitator Superfamily
CJ306_18805	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
CJ306_18810	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
CJ306_18820	COG1247	-acetyltransferase
CJ306_18825	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CJ306_18830	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CJ306_18835	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CJ306_18840	COG3739	integral membrane protein
CJ306_18845	COG2409	Drug exporters of the RND superfamily
CJ306_18880	COG0583	DNA-binding transcription factor activity
CJ306_18900	COG1193	negative regulation of DNA recombination
CJ306_18915	COG2162	N-hydroxyarylamine O-acetyltransferase activity
CJ306_18920	COG1164	Oligoendopeptidase f
CJ306_18960	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
CJ306_18985	COG0584	glycerophosphoryl diester phosphodiesterase
CJ306_18995	COG0640	Transcriptional regulator
CJ306_19000	COG0604	alcohol dehydrogenase
CJ306_19010	COG0457	Tetratricopeptide repeat
CJ306_19020	COG2808	Putative FMN-binding domain
CJ306_19040	COG0277	FAD linked oxidase domain protein
CJ306_19075	COG3852	Histidine kinase
CJ306_19085	COG1285	pathogenesis
CJ306_19095	COG2514	catechol 2,3-dioxygenase activity
CJ306_19100	COG2720	vancomycin resistance protein
CJ306_19130	COG1278	Cold shock
CJ306_19140	COG0716	FMN binding
CJ306_19150	COG0494	nUDIX hydrolase
CJ306_19170	COG1028	Short-chain dehydrogenase reductase Sdr
CJ306_19180	COG0165	Argininosuccinate lyase
CJ306_19195	COG4145	pantothenate transmembrane transporter activity
CJ306_19200	COG3924	membrane
CJ306_19205	COG1012	belongs to the aldehyde dehydrogenase family
CJ306_19210	COG1028	Short-chain dehydrogenase reductase Sdr
CJ306_19220	COG1657	PFAM Prenyltransferase squalene oxidase
CJ306_19225	COG1963	PFAM Acid phosphatase vanadium-dependent haloperoxidase related
CJ306_19230	COG2962	Rard protein
CJ306_19235	COG3326	Membrane
CJ306_19250	COG0489	protein tyrosine kinase activity
CJ306_19260	COG0314	molybdopterin synthase activity
CJ306_19265	COG0303	'Molybdopterin
CJ306_19270	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
CJ306_19275	COG2116	formate transmembrane transporter activity
CJ306_19290	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
CJ306_19295	COG5609	conserved protein (DUF2294)
CJ306_19300	COG2427	Protein of unknown function (DUF1641)
CJ306_19305	COG3383	formate dehydrogenase (NAD+) activity
CJ306_19315	COG0697	spore germination
CJ306_19330	COG0531	amino acid
CJ306_19365	COG2226	methyltransferase
CJ306_19370	COG4166	transmembrane transport
CJ306_19375	COG4166	transmembrane transport
CJ306_19380	COG4166	transmembrane transport
CJ306_19385	COG1316	TRANSCRIPTIONal
CJ306_19395	COG1595	DNA-templated transcription, initiation
CJ306_19405	COG1131	(ABC) transporter
CJ306_19425	COG0673	inositol 2-dehydrogenase activity
CJ306_19430	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
CJ306_19435	COG0187	DNA topoisomerase II activity
CJ306_19445	COG1832	CoA-binding protein
CJ306_19450	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
CJ306_19455	COG0745	RESPONSE REGULATOR receiver
CJ306_19475	COG4841	protein insertion into membrane
CJ306_19480	COG0824	Thioesterase
CJ306_19515	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CJ306_19530	COG1132	(ABC) transporter
CJ306_19535	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
CJ306_19545	COG0726	polysaccharide deacetylase
CJ306_19565	COG2211	Major facilitator Superfamily
CJ306_19575	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
CJ306_19590	COG0183	Belongs to the thiolase family
CJ306_19595	COG0318	PFAM AMP-dependent synthetase and ligase
CJ306_19600	COG1268	BioY protein
CJ306_19605	COG0318	PFAM AMP-dependent synthetase and ligase
CJ306_19650	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CJ306_19665	COG5002	protein histidine kinase activity
CJ306_19670	COG0400	carboxylic ester hydrolase activity
CJ306_19675	COG0346	lactoylglutathione lyase activity
CJ306_19680	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
CJ306_19685	COG0069	glutamate synthase activity
CJ306_19690	COG1902	pentaerythritol trinitrate reductase activity
CJ306_19695	COG1329	Transcriptional regulator
CJ306_19700	COG0010	Belongs to the arginase family
CJ306_19755	COG4846	Membrane protein involved in cytochrome C biogenesis
CJ306_19760	COG0785	Cytochrome C biogenesis protein
CJ306_19785	COG1131	(ABC) transporter
CJ306_19800	COG0583	DNA-binding transcription factor activity
CJ306_19810	COG1346	cytolysis
CJ306_19825	COG0730	response to heat
CJ306_19850	COG1132	(ABC) transporter
CJ306_19855	COG1132	(ABC) transporter
CJ306_19880	COG3639	organic phosphonate transmembrane transporter activity
CJ306_19890	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CJ306_19895	COG0737	Belongs to the 5'-nucleotidase family
CJ306_19905	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
CJ306_19925	COG1695	Transcriptional regulator
CJ306_19945	COG0741	lytic transglycosylase activity
CJ306_19980	COG0174	glutamine synthetase
CJ306_19985	COG0789	Transcriptional regulator
CJ306_19990	COG4100	CystaTHIonine beta-lyase family protein involved in aluminum resistance
CJ306_19995	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
CJ306_20000	COG2860	membrane
CJ306_20005	COG0464	growth
CJ306_20045	COG1388	LysM domain
CJ306_20045	COG3584	3D domain protein
CJ306_20055	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CJ306_20055	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
CJ306_20055	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CJ306_20060	COG1105	Belongs to the carbohydrate kinase PfkB family
CJ306_20065	COG1349	DNA-binding transcription factor activity
CJ306_20070	COG1979	alcohol dehydrogenase
CJ306_20075	COG2322	membrane
CJ306_20090	COG1113	amino acid transport
CJ306_20105	COG1408	metallophosphoesterase
CJ306_20110	COG2116	formate transmembrane transporter activity
CJ306_20125	COG2217	Heavy metal translocating P-type atpase
CJ306_20130	COG2608	mercury ion transmembrane transporter activity
CJ306_20135	COG1937	Protein conserved in bacteria
CJ306_20145	COG2819	hydrolase of the alpha beta superfamily
CJ306_20150	COG1120	ATPase activity
CJ306_20155	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CJ306_20160	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CJ306_20165	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CJ306_20170	COG0708	Exodeoxyribonuclease III
CJ306_20175	COG2169	Transcriptional regulator
CJ306_20180	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
CJ306_20185	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
CJ306_20205	COG2267	carboxylic ester hydrolase activity
CJ306_20210	COG5001	Diguanylate cyclase
CJ306_20210	COG3300	MHYT domain
CJ306_20230	COG1086	Polysaccharide biosynthesis protein
CJ306_20250	COG1346	cytolysis
CJ306_20260	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CJ306_20270	COG2188	Transcriptional regulator
CJ306_20275	COG2723	6-phospho-beta-galactosidase activity
CJ306_20285	COG1404	Belongs to the peptidase S8 family
CJ306_20290	COG3773	Cell wall hydrolase
CJ306_20305	COG1368	sulfuric ester hydrolase activity
CJ306_20335	COG4550	Control of competence regulator ComK, YlbF/YmcA
CJ306_20345	COG1013	pyruvate-flavodoxin oxidoreductase activity
CJ306_20350	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
CJ306_20350	COG0674	pyruvate-flavodoxin oxidoreductase activity
CJ306_20360	COG2359	stage V sporulation protein S
CJ306_20365	COG1692	metallophosphoesterase
CJ306_20385	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
CJ306_20390	COG1426	Protein conserved in bacteria
CJ306_20405	COG0300	oxidoreductase activity
CJ306_20410	COG0612	Peptidase, M16
CJ306_20415	COG0612	Peptidase, M16
CJ306_20440	COG2188	Transcriptional regulator
CJ306_20460	COG0740	serine-type endopeptidase activity
CJ306_20465	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
CJ306_20475	COG0527	aspartate kinase activity
CJ306_20480	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
CJ306_20485	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
CJ306_20490	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CJ306_20495	COG1873	PFAM PRC-barrel domain
CJ306_20500	COG0612	Peptidase, M16
CJ306_20505	COG0726	polysaccharide deacetylase
CJ306_20520	COG0196	riboflavin kinase activity
CJ306_20535	COG1550	Protein conserved in bacteria
CJ306_20545	COG1358	cellular component organization or biogenesis
CJ306_20550	COG2740	Nucleic-acid-binding protein implicated in transcription termination
CJ306_20555	COG0195	Participates in both transcription termination and antitermination
CJ306_20575	COG0750	zinc metalloprotease
CJ306_20585	COG4589	Belongs to the CDS family
CJ306_20630	COG4974	Belongs to the 'phage' integrase family
CJ306_20640	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
CJ306_20645	COG0758	DNA mediated transformation
CJ306_20650	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
CJ306_20690	COG1837	Belongs to the UPF0109 family
CJ306_20700	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
CJ306_20710	COG0552	protein localization to endoplasmic reticulum
CJ306_20715	COG1196	nuclear chromosome segregation
CJ306_20730	COG1028	Short-chain dehydrogenase reductase Sdr
CJ306_20735	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
CJ306_20750	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
CJ306_20755	COG1461	Dihydroxyacetone kinase
CJ306_20760	COG1302	Protein conserved in bacteria
CJ306_20775	COG1564	THIamine pyrophosphokinase
CJ306_20780	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
CJ306_20790	COG0515	serine threonine protein kinase
CJ306_20790	COG2815	serine threonine protein kinase
CJ306_20795	COG0631	protein serine/threonine phosphatase activity
CJ306_20805	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
CJ306_20805	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
CJ306_20820	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
CJ306_20825	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
CJ306_20845	COG1561	YicC-like family, N-terminal region
CJ306_20850	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
CJ306_20865	COG0006	proline dipeptidase activity
CJ306_20885	COG3069	C4-dicarboxylate transmembrane transporter activity
CJ306_20950	COG0564	pseudouridine synthase activity
CJ306_20970	COG3599	regulation of cell shape
CJ306_20975	COG2302	S4 RNA-binding domain
CJ306_20980	COG0762	integral membrane protein
CJ306_20990	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
CJ306_21000	COG1873	PFAM PRC-barrel domain
CJ306_21005	COG1191	sigma factor activity
CJ306_21010	COG1191	sigma factor activity
CJ306_21020	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
CJ306_21025	COG0849	cell division
CJ306_21045	COG0772	Belongs to the SEDS family
CJ306_21065	COG0768	penicillin binding
CJ306_21090	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
CJ306_21110	COG1399	metal-binding, possibly nucleic acid-binding protein
CJ306_21120	COG3480	Lon protease (S16) C-terminal proteolytic domain
CJ306_21125	COG1752	Esterase of the alpha-beta hydrolase superfamily
CJ306_21130	COG3314	Sporulation integral membrane protein YlbJ
CJ306_21140	COG0742	ribosomal rna small subunit methyltransferase
CJ306_21155	COG3679	Belongs to the UPF0342 family
CJ306_21160	COG0406	alpha-ribazole phosphatase activity
CJ306_21175	COG2340	Cysteine-rich secretory protein family
CJ306_21190	COG3336	cytochrome c oxidase
CJ306_21225	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
CJ306_21235	COG0772	Belongs to the SEDS family
CJ306_21245	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
CJ306_21250	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
CJ306_21260	COG4896	Protein conserved in bacteria
CJ306_21285	COG0483	inositol monophosphate 1-phosphatase activity
CJ306_21305	COG1982	Orn Lys Arg decarboxylase major
CJ306_21355	COG0022	dehydrogenase e1 component
CJ306_21360	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
CJ306_21375	COG0561	phosphatase activity
CJ306_21390	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
CJ306_21395	COG0569	domain protein
CJ306_21415	COG0583	DNA-binding transcription factor activity
CJ306_21420	COG0517	IMP dehydrogenase activity
CJ306_21430	COG1978	Selenoprotein B, glycine betaine sarcosine D-proline reductase family
CJ306_21440	COG4703	Protein of unknown function (DUF1797)
CJ306_21455	COG2200	EAL domain
CJ306_21460	COG1028	Short-chain dehydrogenase reductase Sdr
CJ306_21465	COG1408	metallophosphoesterase
CJ306_21515	COG2814	Major facilitator Superfamily
CJ306_21535	COG3209	COG3209 Rhs family protein
CJ306_21550	COG2205	protein histidine kinase activity
CJ306_21560	COG0436	Aminotransferase
CJ306_21565	COG1609	Transcriptional regulator
CJ306_21570	COG3833	ABC-type maltose transport systems, permease component
CJ306_21575	COG1175	transmembrane transport
CJ306_21580	COG2182	Extracellular solute-binding protein
CJ306_21590	COG0366	Alpha amylase catalytic
CJ306_21595	COG3842	ATPase activity
CJ306_21635	COG0183	Belongs to the thiolase family
CJ306_21670	COG1695	Transcriptional regulator
CJ306_21675	COG1028	Short-chain dehydrogenase reductase Sdr
CJ306_21695	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
CJ306_21700	COG0436	Aminotransferase
CJ306_21735	COG2084	Dehydrogenase
CJ306_21745	COG2199	diguanylate cyclase activity
CJ306_21745	COG2203	Gaf domain
CJ306_21750	COG0778	Nitroreductase
CJ306_21775	COG2190	(PTS) system
CJ306_21775	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CJ306_21775	COG1263	PTS System
CJ306_21780	COG3711	transcriptional antiterminator
CJ306_21800	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
CJ306_21830	COG1547	Domain of unknown function (DUF309)
CJ306_21835	COG0456	acetyltransferase
CJ306_21840	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
CJ306_21845	COG4086	secreted protein
CJ306_21850	COG0561	phosphatase activity
CJ306_21855	COG0697	spore germination
CJ306_21870	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
CJ306_21895	COG0733	neurotransmitter:sodium symporter activity
CJ306_21915	COG1686	Belongs to the peptidase S11 family
CJ306_21925	COG1725	Transcriptional regulator
CJ306_21930	COG1131	(ABC) transporter
CJ306_21950	COG1846	Transcriptional regulator
CJ306_21965	COG0598	Magnesium transport protein CorA
CJ306_21990	COG4974	Belongs to the 'phage' integrase family
CJ306_22000	COG0735	belongs to the Fur family
CJ306_22005	COG1300	Membrane
CJ306_22025	COG0667	Aldo Keto reductase
CJ306_22030	COG0656	L-ascorbic acid biosynthetic process
CJ306_22035	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
CJ306_22035	COG0456	acetyltransferase
CJ306_22045	COG0737	Belongs to the 5'-nucleotidase family
CJ306_22045	COG1525	nuclease
CJ306_22045	COG4085	toxin activity
CJ306_22055	COG0596	Alpha beta hydrolase
CJ306_22060	COG2056	Na+-H+ antiporter family
CJ306_22065	COG1609	Transcriptional regulator
CJ306_22070	COG0456	acetyltransferase
CJ306_22075	COG1073	alpha beta
CJ306_22090	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
CJ306_22090	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
CJ306_22095	COG0307	riboflavin synthase, alpha
CJ306_22125	COG1073	alpha beta
CJ306_22125	COG2226	methyltransferase
CJ306_22140	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
CJ306_22160	COG0737	Belongs to the 5'-nucleotidase family
CJ306_22170	COG1522	sequence-specific DNA binding
CJ306_22215	COG0300	oxidoreductase activity
CJ306_22220	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CJ306_22225	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
CJ306_22230	COG1760	l-serine dehydratase
CJ306_22235	COG1760	l-serine dehydratase
CJ306_22270	COG1285	pathogenesis
CJ306_22280	COG2195	Cleaves the N-terminal amino acid of tripeptides
CJ306_22285	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CJ306_22300	COG1376	ErfK ybiS ycfS ynhG family protein
CJ306_22305	COG4129	membrane
CJ306_22310	COG1126	abc transporter atp-binding protein
CJ306_22315	COG0765	amino acid transport
CJ306_22320	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CJ306_22345	COG0772	Belongs to the SEDS family
CJ306_22355	COG0508	dehydrogenase complex catalyzes the overall conversion of
CJ306_22360	COG0022	dehydrogenase e1 component
CJ306_22365	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
CJ306_22370	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
CJ306_22380	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
CJ306_22385	COG0280	phosphate acetyltransferase
CJ306_22395	COG3829	transcription factor binding
CJ306_22395	COG3290	protein histidine kinase activity
CJ306_22405	COG0584	glycerophosphoryl diester phosphodiesterase
CJ306_22410	COG3093	addiction module antidote protein HigA
CJ306_22430	COG0750	zinc metalloprotease
CJ306_22435	COG0497	DNA recombination
CJ306_22445	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
CJ306_22455	COG0142	geranyltranstransferase activity
CJ306_22480	COG1302	Protein conserved in bacteria
CJ306_22485	COG0439	Biotin carboxylase
CJ306_22490	COG0511	ligase activity, forming carbon-carbon bonds
CJ306_22535	COG3854	ATPases associated with a variety of cellular activities
CJ306_22560	COG0006	proline dipeptidase activity
CJ306_22575	COG3872	metal-dependent enzyme
CJ306_22585	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
CJ306_22620	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
CJ306_22630	COG1609	Transcriptional regulator
CJ306_22640	COG2076	Multidrug Resistance protein
CJ306_22645	COG2076	Multidrug Resistance protein
CJ306_22695	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
CJ306_22765	COG1459	type II secretion system
CJ306_22770	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
CJ306_22825	COG0646	methionine synthase
CJ306_22825	COG1410	methionine synthase
CJ306_22830	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
CJ306_22830	COG0646	methionine synthase
CJ306_22835	COG0626	cystathionine gamma-synthase activity
CJ306_22840	COG0626	cystathionine gamma-synthase activity
CJ306_22860	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CJ306_22870	COG1940	carbohydrate kinase activity
CJ306_22875	COG4483	Protein conserved in bacteria
CJ306_22880	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
CJ306_22890	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
CJ306_22895	COG0704	Plays a role in the regulation of phosphate uptake
CJ306_22905	COG0573	inorganic phosphate transmembrane transporter activity
CJ306_22910	COG0573	inorganic phosphate transmembrane transporter activity
CJ306_22915	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
CJ306_22925	COG0477	Major facilitator Superfamily
CJ306_22930	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
CJ306_22940	COG5521	maltodextrose utilization protein MalA
CJ306_22955	COG0735	belongs to the Fur family
CJ306_22960	COG1108	ABC-type Mn2 Zn2 transport systems permease components
CJ306_22965	COG1121	(ABC) transporter
CJ306_22970	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CJ306_23000	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
CJ306_23005	COG2384	SAM-dependent methyltransferase
CJ306_23015	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
CJ306_23020	COG0358	DNA primase activity
CJ306_23040	COG0517	IMP dehydrogenase activity
CJ306_23055	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
CJ306_23060	COG0295	cytidine deaminase activity
CJ306_23065	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
CJ306_23075	COG1480	7TM receptor with intracellular HD hydrolase
CJ306_23080	COG1702	phosphate starvation-inducible protein PhoH
CJ306_23100	COG1610	YqeY-like protein
CJ306_23115	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
CJ306_23120	COG1385	rRNA (uridine-N3-)-methyltransferase activity
CJ306_23150	COG0635	Involved in the biosynthesis of porphyrin-containing compound
CJ306_23155	COG1733	regulation of RNA biosynthetic process
CJ306_23180	COG1466	dna polymerase III delta subunit
CJ306_23190	COG2333	competence protein COMEC
CJ306_23190	COG0658	competence protein
CJ306_23195	COG2131	deaminase
CJ306_23200	COG1555	photosystem II stabilization
CJ306_23200	COG1596	polysaccharide export
CJ306_23205	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
CJ306_23210	COG2226	methyltransferase
CJ306_23215	COG0799	negative regulation of ribosome biogenesis
CJ306_23220	COG1713	HD superfamily hydrolase involved in NAD metabolism
CJ306_23230	COG1534	Rna-binding protein
CJ306_23240	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
CJ306_23245	COG2179	HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
CJ306_23260	COG1191	sigma factor activity
CJ306_23280	COG0778	Nitroreductase
CJ306_23285	COG2357	RelA SpoT domain protein
CJ306_23295	COG1785	Belongs to the alkaline phosphatase family
CJ306_23305	COG2267	carboxylic ester hydrolase activity
CJ306_23340	COG1404	Belongs to the peptidase S8 family
CJ306_23350	COG3186	Phenylalanine-4-hydroxylase
CJ306_23360	COG2514	catechol 2,3-dioxygenase activity
CJ306_23365	COG2259	Doxx family
CJ306_23405	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CJ306_23420	COG1012	belongs to the aldehyde dehydrogenase family
CJ306_23420	COG1454	alcohol dehydrogenase
CJ306_23425	COG0626	cystathionine gamma-synthase activity
CJ306_23430	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
CJ306_23455	COG0768	penicillin binding
CJ306_23490	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
CJ306_23520	COG0628	permease
CJ306_23540	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
CJ306_23555	COG1104	cysteine desulfurase activity
CJ306_23560	COG1959	2 iron, 2 sulfur cluster binding
CJ306_23565	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
CJ306_23585	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
CJ306_23610	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
CJ306_23620	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
CJ306_23620	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
CJ306_23625	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
CJ306_23630	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
CJ306_23630	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
CJ306_23640	COG2244	polysaccharide biosynthetic process
CJ306_23645	COG2323	membrane
CJ306_23655	COG1862	Preprotein translocase
CJ306_23685	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
CJ306_23715	COG0157	Belongs to the NadC ModD family
CJ306_23720	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
CJ306_23725	COG1104	cysteine desulfurase activity
CJ306_23730	COG1827	regulation of RNA biosynthetic process
CJ306_23735	COG2258	MOSC domain
CJ306_23765	COG0077	Prephenate dehydratase
CJ306_23770	COG0577	efflux transmembrane transporter activity
CJ306_23775	COG0577	efflux transmembrane transporter activity
CJ306_23780	COG1136	(ABC) transporter
CJ306_23785	COG5002	protein histidine kinase activity
CJ306_23790	COG0745	RESPONSE REGULATOR receiver
CJ306_23800	COG3290	protein histidine kinase activity
CJ306_23810	COG2868	ribosomal protein
CJ306_23820	COG1530	ribonuclease E activity
CJ306_23825	COG1994	Peptidase M50
CJ306_23830	COG0739	heme binding
CJ306_23835	COG2894	cell division
CJ306_23850	COG1792	Involved in formation and maintenance of cell shape
CJ306_23855	COG1077	Cell shape determining protein MreB Mrl
CJ306_23875	COG0285	dihydrofolate synthase activity
CJ306_23890	COG1388	LysM domain
CJ306_23900	COG0113	porphobilinogen synthase activity
CJ306_23905	COG1587	Uroporphyrinogen-III synthase
CJ306_23915	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
CJ306_23925	COG1846	Transcriptional regulator
CJ306_23930	COG1764	response to oxidative stress
CJ306_23945	COG0470	DNA polymerase III
CJ306_23945	COG1067	ATP-dependent peptidase activity
CJ306_23985	COG0457	Tetratricopeptide repeat
CJ306_24020	COG0622	Phosphoesterase
CJ306_24035	COG5401	PFAM Sporulation and spore germination
CJ306_24055	COG1309	transcriptional regulator
CJ306_24065	COG2197	response regulator
CJ306_24070	COG2233	PERMEase
CJ306_24075	COG0402	S-adenosylhomocysteine deaminase activity
CJ306_24080	COG1983	PspC domain protein
CJ306_24085	COG1396	sequence-specific DNA binding
CJ306_24090	COG0697	spore germination
CJ306_24100	COG1959	2 iron, 2 sulfur cluster binding
CJ306_24105	COG1668	transmembrane transport
CJ306_24110	COG4152	abc transporter atp-binding protein
CJ306_24115	COG2503	HAD superfamily, subfamily IIIB (Acid phosphatase)
CJ306_24120	COG1360	Flagellar Motor Protein
CJ306_24125	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
CJ306_24130	COG1876	peptidase activity
CJ306_24135	COG0824	Thioesterase
CJ306_24140	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
CJ306_24145	COG1053	succinate dehydrogenase
CJ306_24150	COG2009	succinate dehydrogenase
CJ306_24155	COG1719	4-vinyl reductase, 4VR
CJ306_24165	COG3118	belongs to the thioredoxin family
CJ306_24170	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
CJ306_24175	COG2086	electron transfer activity
CJ306_24180	COG1024	Enoyl-CoA hydratase
CJ306_24185	COG1309	transcriptional regulator
CJ306_24190	COG0318	PFAM AMP-dependent synthetase and ligase
CJ306_24225	COG2318	DinB family
CJ306_24255	COG1131	(ABC) transporter
CJ306_24260	COG2205	protein histidine kinase activity
CJ306_24265	COG0745	RESPONSE REGULATOR receiver
CJ306_24275	COG4895	conserved protein (DUF2196)
CJ306_24280	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
CJ306_24295	COG4509	Sortase family
CJ306_24300	COG1120	ATPase activity
CJ306_24315	COG5386	Cell surface protein
CJ306_24320	COG5386	Cell surface protein
CJ306_24325	COG5386	Cell surface protein
CJ306_24330	COG1114	Component of the transport system for branched-chain amino acids
CJ306_24335	COG1187	pseudouridine synthase activity
CJ306_24350	COG1796	DNA polymerase
CJ306_24350	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
CJ306_24355	COG1286	toxin biosynthetic process
CJ306_24410	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
CJ306_24420	COG1418	mRNA catabolic process
CJ306_24440	COG2814	Major facilitator Superfamily
CJ306_24445	COG1566	PFAM secretion protein HlyD family protein
CJ306_24450	COG1309	transcriptional regulator
CJ306_24455	COG1363	Peptidase, m42
CJ306_24480	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
CJ306_24495	COG1484	DNA-dependent DNA replication
CJ306_24500	COG3611	Membrane attachment protein
CJ306_24510	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
CJ306_24520	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
CJ306_24525	COG0237	dephospho-CoA kinase activity
CJ306_24530	COG1971	Probably functions as a manganese efflux pump
CJ306_24540	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
CJ306_24540	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
CJ306_24545	COG5002	protein histidine kinase activity
CJ306_24550	COG0745	RESPONSE REGULATOR receiver
CJ306_24575	COG0538	isocitrate dehydrogenase activity
CJ306_24580	COG0372	Belongs to the citrate synthase family
CJ306_24595	COG0628	permease
CJ306_24600	COG3030	protein affecting phage T7 exclusion by the F plasmid
CJ306_24625	COG1725	Transcriptional regulator
CJ306_24630	COG0281	malic enzyme
CJ306_24635	COG0587	DNA-directed DNA polymerase activity
CJ306_24650	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
CJ306_24665	COG4109	DRTGG domain
CJ306_24680	COG0006	proline dipeptidase activity
CJ306_24720	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CJ306_24725	COG0662	Cupin 2, conserved barrel domain protein
CJ306_24740	COG1028	Short-chain dehydrogenase reductase Sdr
CJ306_24745	COG0589	response to stress
CJ306_24790	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CJ306_24815	COG0827	DNA restriction-modification system
CJ306_24820	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
CJ306_24830	COG3874	Sporulation protein YtfJ
CJ306_24845	COG1574	metal-dependent hydrolase with the TIM-barrel fold
CJ306_24855	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
CJ306_24870	COG1104	cysteine desulfurase activity
CJ306_24880	COG0583	DNA-binding transcription factor activity
CJ306_24885	COG0697	spore germination
CJ306_24890	COG1309	transcriptional regulator
CJ306_24895	COG1956	GAF domain-containing protein
CJ306_24900	COG0626	cystathionine gamma-synthase activity
CJ306_24960	COG1595	DNA-templated transcription, initiation
CJ306_24970	COG0110	maltose O-acetyltransferase activity
CJ306_24975	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
CJ306_24980	COG0454	-acetyltransferase
CJ306_24985	COG0517	IMP dehydrogenase activity
CJ306_24990	COG0123	including yeast histone deacetylase and acetoin utilization protein
CJ306_25005	COG0745	RESPONSE REGULATOR receiver
CJ306_25015	COG0666	response to abiotic stimulus
CJ306_25050	COG1609	Transcriptional regulator
CJ306_25065	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
CJ306_25065	COG1605	Chorismate mutase
CJ306_25070	COG4851	CamS sex pheromone cAM373 precursor
CJ306_25075	COG3118	belongs to the thioredoxin family
CJ306_25085	COG2309	aminopeptidase activity
CJ306_25110	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CJ306_25125	COG1674	ftsk spoiiie
CJ306_25130	COG0860	N-Acetylmuramoyl-L-alanine amidase
CJ306_25145	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
CJ306_25155	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CJ306_25160	COG1986	Phosphatase that hydrolyzes non-canonical purine nucleotides such as XTP and ITP to their respective diphosphate derivatives. Probably excludes non-canonical purines from DNA precursor pool, thus preventing their incorporation into DNA and avoiding chromosomal lesions
CJ306_25165	COG1363	Peptidase, m42
CJ306_25175	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CJ306_25190	COG0510	thiamine kinase activity
CJ306_25195	COG1523	belongs to the glycosyl hydrolase 13 family
CJ306_25210	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
CJ306_25215	COG1349	DNA-binding transcription factor activity
CJ306_25220	COG1187	pseudouridine synthase activity
CJ306_25225	COG2244	polysaccharide biosynthetic process
CJ306_25230	COG2081	HI0933 family
CJ306_25240	COG2814	Major facilitator Superfamily
CJ306_25250	COG3832	glyoxalase III activity
CJ306_25275	COG1329	Transcriptional regulator
CJ306_25300	COG0314	molybdopterin synthase activity
CJ306_25305	COG1763	Mo-molybdopterin cofactor biosynthetic process
CJ306_25310	COG0303	'Molybdopterin
CJ306_25320	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
CJ306_25325	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
CJ306_25350	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
CJ306_25360	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
CJ306_25400	COG2814	Major facilitator Superfamily
CJ306_25405	COG0475	glutathione-regulated potassium exporter activity
CJ306_25410	COG0490	domain, Protein
CJ306_25415	COG0582	viral genome integration into host DNA
CJ306_25425	COG1136	(ABC) transporter
CJ306_25445	COG1242	4 iron, 4 sulfur cluster binding
CJ306_25450	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
CJ306_25465	COG1794	racemase activity, acting on amino acids and derivatives
CJ306_25475	COG5504	Zn-dependent protease
CJ306_25495	COG2267	carboxylic ester hydrolase activity
CJ306_25500	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
CJ306_25505	COG0671	phosphoesterase, PA-phosphatase related
CJ306_25510	COG0438	transferase activity, transferring glycosyl groups
CJ306_25580	COG0546	phosphoglycolate phosphatase activity
CJ306_25585	COG1349	DNA-binding transcription factor activity
CJ306_25600	COG5002	protein histidine kinase activity
CJ306_25605	COG3852	Histidine kinase
CJ306_25620	COG2267	carboxylic ester hydrolase activity
CJ306_25625	COG1368	sulfuric ester hydrolase activity
CJ306_25645	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
CJ306_25650	COG1116	anion transmembrane transporter activity
CJ306_25655	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CJ306_25680	COG0494	nUDIX hydrolase
CJ306_25725	COG0288	reversible hydration of carbon dioxide
CJ306_25735	COG1271	oxidase subunit
CJ306_25740	COG1294	oxidase, subunit
CJ306_25755	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CJ306_25780	COG1842	Phage shock protein A
CJ306_25810	COG5002	protein histidine kinase activity
CJ306_25815	COG0745	RESPONSE REGULATOR receiver
CJ306_25845	COG1597	lipid kinase activity
CJ306_25885	COG0577	efflux transmembrane transporter activity
CJ306_25890	COG1136	(ABC) transporter
CJ306_25915	COG0586	Pfam SNARE associated Golgi protein
CJ306_25925	COG0577	efflux transmembrane transporter activity
CJ306_25930	COG1136	(ABC) transporter
CJ306_25935	COG2207	Transcriptional regulator
CJ306_25935	COG3708	Transcriptional regulator
CJ306_25945	COG1131	(ABC) transporter
CJ306_25950	COG5658	integral membrane protein
CJ306_25955	COG0640	Transcriptional regulator
CJ306_25960	COG0745	RESPONSE REGULATOR receiver
CJ306_25965	COG2205	protein histidine kinase activity
CJ306_25970	COG0577	efflux transmembrane transporter activity
CJ306_25975	COG0577	efflux transmembrane transporter activity
CJ306_25980	COG1136	(ABC) transporter
CJ306_25985	COG0577	efflux transmembrane transporter activity
CJ306_26020	COG3964	amidohydrolase
CJ306_26040	COG4948	Mandelate Racemase Muconate Lactonizing
CJ306_26050	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
CJ306_26055	COG0596	Alpha beta hydrolase
CJ306_26065	COG1169	isochorismate synthase
CJ306_26070	COG1575	Belongs to the MenA family. Type 1 subfamily
CJ306_26075	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
CJ306_26080	COG1278	Cold shock
CJ306_26105	COG0058	SHG alpha-glucan phosphorylase activity
CJ306_26115	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
CJ306_26135	COG1404	Belongs to the peptidase S8 family
CJ306_26240	COG0544	peptidyl-prolyl cis-trans isomerase activity
CJ306_26280	COG1285	pathogenesis
CJ306_26285	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
CJ306_26305	COG2155	Conserved Protein
CJ306_26310	COG1098	S1 RNA binding domain
CJ306_26315	COG0436	Aminotransferase
CJ306_26320	COG1522	sequence-specific DNA binding
CJ306_26325	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CJ306_26330	COG2267	carboxylic ester hydrolase activity
CJ306_26340	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
CJ306_26355	COG5018	Exonuclease
CJ306_26360	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
CJ306_26380	COG0423	glycine-tRNA ligase activity
CJ306_26385	COG2050	protein possibly involved in aromatic compounds catabolism
CJ306_26395	COG1268	BioY protein
CJ306_26405	COG1210	Utp--glucose-1-phosphate uridylyltransferase
CJ306_26410	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
CJ306_26430	COG2076	Multidrug Resistance protein
CJ306_26435	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
CJ306_26445	COG3584	3D domain protein
CJ306_26460	COG1252	NADH dehydrogenase
CJ306_26475	COG3708	Transcriptional regulator
CJ306_26490	COG1683	Conserved Protein
CJ306_26510	COG0316	Belongs to the HesB IscA family
CJ306_26525	COG1252	NADH dehydrogenase
CJ306_26535	COG2274	protein secretion by the type I secretion system
CJ306_26540	COG0390	transport system, permease component
CJ306_26545	COG2824	Alkylphosphonate utilization operon protein PhnA
CJ306_26590	COG4837	Protein of unknown function (DUF1462)
CJ306_26595	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
CJ306_26610	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
CJ306_26615	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
CJ306_26630	COG2249	NAD(P)H dehydrogenase (quinone) activity
CJ306_26640	COG0647	UMP catabolic process
CJ306_26650	COG2445	Protein of unknown function DUF86
CJ306_26655	COG1494	fructose-1,6-bisphosphatase
CJ306_26680	COG4470	Protein conserved in bacteria
CJ306_26690	COG0789	Transcriptional regulator
CJ306_26695	COG4377	Putative membrane peptidase family (DUF2324)
CJ306_26725	COG0739	heme binding
CJ306_26735	COG3377	Domain of unknown function (DUF1805)
CJ306_26740	COG0737	Belongs to the 5'-nucleotidase family
CJ306_26745	COG0719	Fe-S assembly protein
CJ306_26750	COG0822	iron-sulfur transferase activity
CJ306_26755	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
CJ306_26760	COG0719	Fe-S assembly protein
CJ306_26765	COG0396	ATPase activity
CJ306_26770	COG1464	Belongs to the NlpA lipoprotein family
CJ306_26775	COG1464	Belongs to the NlpA lipoprotein family
CJ306_26780	COG2011	ABC-type metal ion transport system permease component
CJ306_26785	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
CJ306_26800	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CJ306_26805	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
CJ306_26820	COG1393	Belongs to the ArsC family
CJ306_26840	COG0039	L-malate dehydrogenase activity
CJ306_26865	COG1309	transcriptional regulator
CJ306_26870	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CJ306_26875	COG1960	acyl-CoA dehydrogenase activity
CJ306_26885	COG0183	Belongs to the thiolase family
CJ306_26890	COG1250	3-hydroxyacyl-CoA dehydrogenase
CJ306_26890	COG1024	Enoyl-CoA hydratase
CJ306_26905	COG1686	Belongs to the peptidase S11 family
CJ306_26920	COG0011	TIGRFAM Protein of
CJ306_26925	COG0840	transmembrane signaling receptor activity
CJ306_26940	COG2814	Major facilitator Superfamily
CJ306_26945	COG0531	amino acid
CJ306_26975	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CJ306_27015	COG0586	Pfam SNARE associated Golgi protein
CJ306_27025	COG1376	ErfK ybiS ycfS ynhG family protein
CJ306_27030	COG0745	RESPONSE REGULATOR receiver
CJ306_27035	COG5002	protein histidine kinase activity
CJ306_27065	COG0840	transmembrane signaling receptor activity
CJ306_27070	COG2151	metal-sulfur cluster biosynthetic enzyme
CJ306_27075	COG3227	Zinc metalloprotease (Elastase)
CJ306_27080	COG1741	Belongs to the pirin family
CJ306_27095	COG0475	glutathione-regulated potassium exporter activity
CJ306_27100	COG0490	domain, Protein
CJ306_27110	COG1115	amino acid carrier protein
CJ306_27120	COG0783	Belongs to the Dps family
CJ306_27135	COG1611	Belongs to the LOG family
CJ306_27145	COG1528	Iron-storage protein
CJ306_27150	COG2311	Membrane
CJ306_27155	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
CJ306_27160	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
CJ306_27165	COG1115	amino acid carrier protein
CJ306_27170	COG1115	amino acid carrier protein
CJ306_27175	COG2910	NAD(P)H-binding
CJ306_27195	COG0656	L-ascorbic acid biosynthetic process
CJ306_27200	COG2814	Major facilitator Superfamily
CJ306_27205	COG1733	regulation of RNA biosynthetic process
CJ306_27215	COG1252	NADH dehydrogenase
CJ306_27220	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
CJ306_27270	COG0488	(ABC) transporter
CJ306_27275	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CJ306_27280	COG3223	Belongs to the PsiE family
CJ306_27350	COG0557	exoribonuclease II activity
CJ306_27355	COG1647	Serine aminopeptidase, S33
CJ306_27360	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
CJ306_27365	COG1346	cytolysis
CJ306_27400	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
CJ306_27415	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
CJ306_27425	COG1668	transmembrane transport
CJ306_27430	COG4152	abc transporter atp-binding protein
CJ306_27435	COG4585	Histidine kinase
CJ306_27465	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
CJ306_27480	COG2323	membrane
CJ306_27490	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
CJ306_27500	COG0391	Required for morphogenesis under gluconeogenic growth conditions
CJ306_27510	COG1051	belongs to the nudix hydrolase family
CJ306_27520	COG0492	ferredoxin-NADP+ reductase activity
CJ306_27525	COG0457	Tetratricopeptide repeat
CJ306_27530	COG0110	maltose O-acetyltransferase activity
CJ306_27550	COG1950	PFAM Membrane protein of
CJ306_27555	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
CJ306_27560	COG0556	nucleotide-excision repair
CJ306_27575	COG0789	Transcriptional regulator
CJ306_27595	COG0583	DNA-binding transcription factor activity
CJ306_27605	COG0655	NAD(P)H dehydrogenase (quinone) activity
CJ306_27620	COG1132	(ABC) transporter
CJ306_27630	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
CJ306_27635	COG0793	Belongs to the peptidase S41A family
CJ306_27635	COG3409	Peptidoglycan-binding domain 1 protein
CJ306_27640	COG2177	Part of the ABC transporter FtsEX involved in
CJ306_27645	COG2884	Cell division ATP-binding protein ftsE
CJ306_27665	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
CJ306_27685	COG1131	(ABC) transporter
CJ306_27715	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
CJ306_27720	COG1278	Cold shock
CJ306_27725	COG1040	competence protein
CJ306_27730	COG4098	Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
CJ306_27735	COG0791	NLP P60 protein
CJ306_27735	COG1388	LysM domain
CJ306_27740	COG1733	regulation of RNA biosynthetic process
CJ306_27745	COG1307	EDD domain protein, DegV family
CJ306_27750	COG1739	Uncharacterized protein family UPF0029
CJ306_27755	COG1316	TRANSCRIPTIONal
CJ306_27760	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
CJ306_27765	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
CJ306_27770	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
CJ306_27780	COG3933	PFAM sigma-54 factor interaction domain-containing protein
CJ306_27780	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
CJ306_27800	COG1486	melibiose metabolic process
CJ306_27805	COG1447	Phosphotransferase system cellobiose-specific component IIA
CJ306_27810	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CJ306_27830	COG1447	Phosphotransferase system cellobiose-specific component IIA
CJ306_27840	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CJ306_27845	COG1301	dicarboxylic acid transport
CJ306_27860	COG1511	domain protein
CJ306_27865	COG0583	DNA-binding transcription factor activity
CJ306_27870	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
CJ306_27880	COG1271	oxidase subunit
CJ306_27885	COG1294	oxidase, subunit
CJ306_27890	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
CJ306_27920	COG1620	l-lactate permease
CJ306_27930	COG2389	metal-binding protein
CJ306_27945	COG1368	sulfuric ester hydrolase activity
CJ306_27960	COG1388	LysM domain
CJ306_27960	COG0791	NLP P60 protein
CJ306_27965	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
CJ306_27975	COG1215	transferase activity, transferring glycosyl groups
CJ306_27985	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
CJ306_27995	COG3584	3D domain protein
CJ306_27995	COG1388	LysM domain
CJ306_28020	COG4715	Zinc finger, swim domain protein
CJ306_28025	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
CJ306_28055	COG1191	sigma factor activity
CJ306_28065	COG0577	efflux transmembrane transporter activity
CJ306_28070	COG1136	(ABC) transporter
CJ306_28105	COG5002	protein histidine kinase activity
CJ306_28110	COG0745	RESPONSE REGULATOR receiver
CJ306_28115	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
CJ306_28140	COG1216	Glycosyl transferase, family 2
CJ306_28145	COG0438	transferase activity, transferring glycosyl groups
CJ306_28150	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
CJ306_28160	COG1181	Belongs to the D-alanine--D-alanine ligase family
CJ306_28165	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
CJ306_28170	COG1086	Polysaccharide biosynthesis protein
CJ306_28175	COG1210	Utp--glucose-1-phosphate uridylyltransferase
CJ306_28180	COG4464	protein tyrosine phosphatase activity
CJ306_28185	COG0489	protein tyrosine kinase activity
CJ306_28190	COG3944	biosynthesis protein
CJ306_28195	COG0489	protein tyrosine kinase activity
CJ306_28210	COG1609	Transcriptional regulator
CJ306_28220	COG0739	heme binding
CJ306_28235	COG3279	Response regulator of the LytR AlgR family
CJ306_28240	COG2385	sporulation resulting in formation of a cellular spore
CJ306_28255	COG4836	Membrane
CJ306_28260	COG1007	ATP synthesis coupled electron transport
CJ306_28265	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CJ306_28270	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
CJ306_28280	COG0839	Belongs to the complex I subunit 6 family
CJ306_28300	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CJ306_28315	COG5001	Diguanylate cyclase
CJ306_28315	COG3300	MHYT domain
CJ306_28375	COG0356	it plays a direct role in the translocation of protons across the membrane
CJ306_28410	COG0698	ribose 5-phosphate isomerase
CJ306_28430	COG2259	Doxx family
CJ306_28435	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
CJ306_28455	COG0009	L-threonylcarbamoyladenylate synthase
CJ306_28495	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
CJ306_28505	COG1494	fructose-1,6-bisphosphatase
CJ306_28530	COG4821	SIS domain
CJ306_28550	COG1960	acyl-CoA dehydrogenase activity
CJ306_28555	COG1960	acyl-CoA dehydrogenase activity
CJ306_28560	COG1250	3-hydroxyacyl-CoA dehydrogenase
CJ306_28565	COG0183	Belongs to the thiolase family
CJ306_28570	COG0247	lactate metabolic process
CJ306_28570	COG2181	nitrate reductase activity
CJ306_28580	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CJ306_28590	COG3300	MHYT domain
CJ306_28590	COG5001	Diguanylate cyclase
CJ306_28605	COG3227	Zinc metalloprotease (Elastase)
CJ306_28610	COG2197	response regulator
CJ306_28615	COG4585	Histidine kinase
CJ306_28620	COG0842	Transport permease protein
CJ306_28625	COG1131	(ABC) transporter
CJ306_28630	COG0024	Methionine aminopeptidase
CJ306_28645	COG2234	aminopeptidase activity
CJ306_28665	COG1595	DNA-templated transcription, initiation
CJ306_28680	COG4506	Protein conserved in bacteria
CJ306_28685	COG1619	proteins homologs of microcin C7 resistance protein MccF
CJ306_28705	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
CJ306_28710	COG2814	Major facilitator Superfamily
CJ306_28715	COG0789	Transcriptional regulator
CJ306_28720	COG0584	glycerophosphoryl diester phosphodiesterase
CJ306_28725	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
CJ306_28735	COG1994	Peptidase M50
CJ306_28745	COG1078	dGTPase activity
CJ306_28750	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CJ306_28755	COG1120	ATPase activity
CJ306_28760	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CJ306_28765	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CJ306_28785	COG0280	phosphate acetyltransferase
CJ306_28800	COG3773	Cell wall hydrolase
CJ306_28810	COG2363	Small membrane protein
CJ306_28820	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
CJ306_28825	COG2233	PERMEase
CJ306_28830	COG0561	phosphatase activity
CJ306_28835	COG2814	Major facilitator Superfamily
CJ306_28845	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
CJ306_28850	COG1131	(ABC) transporter
CJ306_28855	COG2755	lipolytic protein G-D-S-L family
CJ306_28860	COG1609	Transcriptional regulator
CJ306_28870	COG0460	homoserine dehydrogenase
CJ306_28890	COG1011	Hydrolase
CJ306_28895	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
CJ306_28905	COG2197	response regulator
CJ306_28910	COG2203	Gaf domain
CJ306_28910	COG4585	Histidine kinase
CJ306_28915	COG0351	phosphomethylpyrimidine kinase
CJ306_28920	COG3706	GGDEF domain
CJ306_28925	COG2879	small protein
CJ306_28930	COG1966	Carbon starvation protein
CJ306_28935	COG3279	Response regulator of the LytR AlgR family
CJ306_28940	COG0477	Major facilitator Superfamily
CJ306_28955	COG0438	transferase activity, transferring glycosyl groups
CJ306_28970	COG0840	transmembrane signaling receptor activity
CJ306_28980	COG1607	acyl-coa hydrolase
CJ306_28985	COG1216	Glycosyl transferase, family 2
CJ306_28995	COG1216	Glycosyl transferase, family 2
CJ306_29005	COG4485	Bacterial membrane protein, YfhO
CJ306_29010	COG0463	Glycosyl transferase, family 2
CJ306_29015	COG0488	(ABC) transporter
CJ306_29020	COG1309	transcriptional regulator
CJ306_29025	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CJ306_29030	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
CJ306_29030	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
CJ306_29035	COG0628	permease
CJ306_29060	COG2814	Major facilitator Superfamily
CJ306_29065	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
CJ306_29070	COG4362	Belongs to the NOS family. Bacterial NOS oxygenase subfamily
CJ306_29100	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
CJ306_29105	COG1272	protein, Hemolysin III
CJ306_29125	COG1164	Oligoendopeptidase f
CJ306_29135	COG5002	protein histidine kinase activity
CJ306_29150	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
CJ306_29155	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
CJ306_29160	COG4853	Protein conserved in bacteria
CJ306_29170	COG5002	protein histidine kinase activity
CJ306_29175	COG0745	RESPONSE REGULATOR receiver
CJ306_29205	COG0305	Participates in initiation and elongation during chromosome replication
CJ306_29215	COG3887	signaling protein consisting of a modified GGDEF domain and a DHH domain
CJ306_29220	COG4241	membrane
CJ306_29240	COG0012	GTP binding
CJ306_29245	COG4481	Protein conserved in bacteria
CJ306_29250	COG0668	transmembrane transport
CJ306_29260	COG1475	DNA binding
CJ306_29265	COG1192	Involved in chromosome partitioning
CJ306_29290	COG1847	R3H domain protein
CJ306_29555	COG4990	cell redox homeostasis
CJ306_29560	COG2267	carboxylic ester hydrolase activity
CJ306_29580	COG0463	Glycosyl transferase, family 2
CJ306_29600	COG0671	phosphoesterase, PA-phosphatase related
CJ306_29610	COG3443	Belongs to the bacterial solute-binding protein 9 family
CJ306_29730	COG2311	Membrane
CJ306_29765	COG1378	Sugar-specific transcriptional regulator TrmB
CJ306_29820	COG0450	alkyl hydroperoxide reductase
CJ306_29825	COG0833	amino acid
CJ306_29840	COG2249	NAD(P)H dehydrogenase (quinone) activity
CJ306_29845	COG1733	regulation of RNA biosynthetic process
CJ306_29850	COG0110	maltose O-acetyltransferase activity
CJ306_29855	COG1733	regulation of RNA biosynthetic process
CJ306_29925	COG2356	endonuclease I
CJ306_29950	COG1028	Short-chain dehydrogenase reductase Sdr
CJ306_29985	COG1923	regulation of RNA biosynthetic process
CJ306_30005	COG0531	amino acid
CJ306_30010	COG1522	sequence-specific DNA binding
CJ306_30015	COG1760	l-serine dehydratase
CJ306_30020	COG1760	l-serine dehydratase
CJ306_30025	COG0814	amino acid
CJ306_30040	COG1309	transcriptional regulator
CJ306_30045	COG2814	Major facilitator Superfamily
CJ306_30055	COG0076	glutamate decarboxylase activity
CJ306_30065	COG3049	Linear amide C-N hydrolases, choloylglycine hydrolase family
CJ306_30085	COG0697	spore germination
CJ306_30090	COG1802	Transcriptional regulator
CJ306_30105	COG1280	lysine exporter protein (LysE YggA)
CJ306_30115	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
CJ306_30120	COG0772	Belongs to the SEDS family
CJ306_30125	COG2239	Acts as a magnesium transporter
CJ306_30135	COG2814	Major facilitator Superfamily
CJ306_30140	COG0583	DNA-binding transcription factor activity
CJ306_30155	COG0156	8-amino-7-oxononanoate synthase activity
CJ306_30170	COG0456	acetyltransferase
CJ306_30175	COG1876	peptidase activity
CJ306_30180	COG3409	Peptidoglycan-binding domain 1 protein
CJ306_30180	COG0860	N-Acetylmuramoyl-L-alanine amidase
CJ306_30205	COG1864	DNA RNA non-specific endonuclease
CJ306_30205	COG3591	Belongs to the peptidase S1B family
CJ306_30215	COG4974	Belongs to the 'phage' integrase family
CJ306_30255	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CJ306_30255	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
CJ306_30260	COG1252	NADH dehydrogenase
CJ306_30270	COG0457	Tetratricopeptide repeat
CJ306_30305	COG3397	chitin binding
CJ306_30320	COG0457	Tetratricopeptide repeat
CJ306_30410	COG1132	(ABC) transporter
CJ306_30415	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
CJ306_30425	COG1131	(ABC) transporter
CJ306_30440	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
CJ306_30480	COG3409	Peptidoglycan-binding domain 1 protein
CJ306_30480	COG5632	N-Acetylmuramoyl-L-alanine amidase
CJ306_30485	COG0569	domain protein
CJ306_30525	COG1132	(ABC) transporter
CJ306_30545	COG1475	DNA binding
CJ306_30595	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CJ306_30600	COG1028	Short-chain dehydrogenase reductase Sdr
CJ306_30600	COG0300	oxidoreductase activity
CJ306_30600	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CJ306_30600	COG0318	PFAM AMP-dependent synthetase and ligase
CJ306_30600	COG3321	synthase
CJ306_30615	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CJ306_30620	COG1250	3-hydroxyacyl-CoA dehydrogenase
CJ306_30635	COG1960	acyl-CoA dehydrogenase activity
CJ306_30655	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CJ306_30655	COG0318	PFAM AMP-dependent synthetase and ligase
CJ306_30655	COG0318	PFAM AMP-dependent synthetase and ligase
CJ306_30655	COG0300	oxidoreductase activity
CJ306_30655	COG0300	oxidoreductase activity
CJ306_30655	COG1028	Short-chain dehydrogenase reductase Sdr
CJ306_30655	COG3321	synthase
CJ306_30655	COG1028	Short-chain dehydrogenase reductase Sdr
CJ306_30655	COG3321	synthase
CJ306_30655	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CJ306_30680	COG0667	Aldo Keto reductase
CJ306_30725	COG1216	Glycosyl transferase, family 2
CJ306_30730	COG1024	Enoyl-CoA hydratase
CJ306_30760	COG1396	sequence-specific DNA binding
CJ306_30765	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
CJ306_30770	COG0210	DNA helicase
CJ306_30840	COG1401	restriction endodeoxyribonuclease activity
CJ306_30860	COG0457	Tetratricopeptide repeat
CJ306_30880	COG0457	Tetratricopeptide repeat
CJ306_30905	COG2312	Erythromycin esterase
CJ306_30945	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
CJ306_30985	COG0457	Tetratricopeptide repeat
CJ306_30995	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
CJ306_31010	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
CJ306_31025	COG0577	efflux transmembrane transporter activity
CJ306_31030	COG1136	(ABC) transporter
CJ306_31035	COG2205	protein histidine kinase activity
CJ306_31040	COG0745	RESPONSE REGULATOR receiver
CJ306_31070	COG1404	Belongs to the peptidase S8 family
CJ306_31080	COG4585	Histidine kinase
CJ306_31085	COG0367	asparagine synthase
CJ306_31095	COG1309	transcriptional regulator
CJ306_31100	COG0726	polysaccharide deacetylase
CJ306_31110	COG3048	D-serine ammonia-lyase activity
CJ306_31120	COG1396	sequence-specific DNA binding
CJ306_31265	COG5632	N-Acetylmuramoyl-L-alanine amidase
CJ306_31280	COG1388	LysM domain
CJ306_31280	COG3409	Peptidoglycan-binding domain 1 protein
CJ306_31280	COG5632	N-Acetylmuramoyl-L-alanine amidase
CJ306_31285	COG0739	heme binding
CJ306_31350	COG2234	aminopeptidase activity
CJ306_31460	COG0542	response to heat
CJ306_31465	COG0494	nUDIX hydrolase
CJ306_31470	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
CJ306_31480	COG0457	Tetratricopeptide repeat