locus-tag class description HQJ03_000005 PF00308 Bacterial dnaA protein HQJ03_000005 PF08299 Bacterial dnaA protein helix-turn-helix HQJ03_000005 PF11638 DnaA N-terminal domain HQJ03_000010 PF00712 DNA polymerase III beta subunit, N-terminal domain HQJ03_000010 PF02767 DNA polymerase III beta subunit, central domain HQJ03_000010 PF02768 DNA polymerase III beta subunit, C-terminal domain HQJ03_000020 PF02463 RecF/RecN/SMC N terminal domain HQJ03_000025 PF00204 DNA gyrase B HQJ03_000025 PF00986 DNA gyrase B subunit, carboxyl terminus HQJ03_000025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQJ03_000025 PF01751 Toprim domain HQJ03_000030 PF00521 DNA gyrase/topoisomerase IV, subunit A HQJ03_000030 PF03989 DNA gyrase C-terminal domain, beta-propeller HQJ03_000060 PF14175 YaaC-like Protein HQJ03_000065 PF00478 IMP dehydrogenase / GMP reductase domain HQJ03_000065 PF00571 CBS domain HQJ03_000070 PF07943 Penicillin-binding protein 5, C-terminal domain HQJ03_000070 PF00768 D-alanyl-D-alanine carboxypeptidase HQJ03_000075 PF01680 SOR/SNZ family HQJ03_000080 PF01174 SNO glutamine amidotransferase family HQJ03_000085 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HQJ03_000085 PF02403 Seryl-tRNA synthetase N-terminal domain HQJ03_000100 PF01712 Deoxynucleoside kinase HQJ03_000105 PF01712 Deoxynucleoside kinase HQJ03_000110 PF00857 Isochorismatase family HQJ03_000115 PF14437 MafB19-like deaminase HQJ03_000125 PF12169 DNA polymerase III subunits gamma and tau domain III HQJ03_000130 PF02575 YbaB/EbfC DNA-binding family HQJ03_000135 PF02132 RecR protein HQJ03_000135 PF13662 Toprim domain HQJ03_000140 PF10704 Protein of unknown function (DUF2508) HQJ03_000145 PF07441 SigmaK-factor processing regulatory protein BofA HQJ03_000180 PF01276 Orn/Lys/Arg decarboxylase, major domain HQJ03_000180 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain HQJ03_000185 PF02223 Thymidylate kinase HQJ03_000190 PF09115 DNA polymerase III, delta subunit, C terminal HQJ03_000195 PF04468 PSP1 C-terminal conserved region HQJ03_000200 PF06156 Initiation control protein YabA HQJ03_000205 PF05175 Methyltransferase small domain HQJ03_000210 PF01541 GIY-YIG catalytic domain HQJ03_000215 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HQJ03_000220 PF18277 AbrB C-terminal domain HQJ03_000220 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin HQJ03_000225 PF09334 tRNA synthetases class I (M) HQJ03_000225 PF08264 Anticodon-binding domain of tRNA HQJ03_000225 PF01588 Putative tRNA binding domain HQJ03_000230 PF01026 TatD related DNase HQJ03_000235 PF13331 Domain of unknown function (DUF4093) HQJ03_000235 PF13662 Toprim domain HQJ03_000240 PF00398 Ribosomal RNA adenine dimethylase HQJ03_000245 PF05582 YabG peptidase U57 HQJ03_000250 PF06257 Biofilm formation stimulator VEG HQJ03_000255 PF00269 Small, acid-soluble spore proteins, alpha/beta type HQJ03_000260 PF08544 GHMP kinases C terminal HQJ03_000260 PF00288 GHMP kinases N terminal domain HQJ03_000265 PF00156 Phosphoribosyl transferase domain HQJ03_000265 PF09182 Bacterial purine repressor, N-terminal HQJ03_000270 PF01042 Endoribonuclease L-PSP HQJ03_000275 PF04026 SpoVG HQJ03_000280 PF00483 Nucleotidyl transferase HQJ03_000280 PF00132 Bacterial transferase hexapeptide (six repeats) HQJ03_000285 PF14572 Phosphoribosyl synthetase-associated domain HQJ03_000285 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase HQJ03_000290 PF01195 Peptidyl-tRNA hydrolase HQJ03_000300 PF02559 CarD-like/TRCF domain HQJ03_000300 PF00270 DEAD/DEAH box helicase HQJ03_000300 PF00271 Helicase conserved C-terminal domain HQJ03_000300 PF03461 TRCF domain HQJ03_000300 PF17757 UvrB interaction domain HQJ03_000305 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin HQJ03_000305 PF15714 Stage V sporulation protein T C-terminal, transcription factor HQJ03_000310 PF14667 Polysaccharide biosynthesis C-terminal domain HQJ03_000310 PF01943 Polysaccharide biosynthesis protein HQJ03_000315 PF03819 MazG nucleotide pyrophosphohydrolase domain HQJ03_000315 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HQJ03_000320 PF01479 S4 domain HQJ03_000325 PF07873 YabP family HQJ03_000330 PF09578 Spore cortex protein YabQ (Spore_YabQ) HQJ03_000340 PF00575 S1 RNA binding domain HQJ03_000355 PF07228 Stage II sporulation protein E (SpoIIE) HQJ03_000360 PF11734 TilS substrate C-terminal domain HQJ03_000360 PF01171 PP-loop family HQJ03_000360 PF09179 TilS substrate binding domain HQJ03_000365 PF00156 Phosphoribosyl transferase domain HQJ03_000370 PF01434 Peptidase family M41 HQJ03_000370 PF06480 FtsH Extracellular HQJ03_000370 PF00004 ATPase family associated with various cellular activities (AAA) HQJ03_000370 PF17862 AAA+ lid domain HQJ03_000375 PF03309 Type III pantothenate kinase HQJ03_000380 PF01430 Hsp33 protein HQJ03_000385 PF00291 Pyridoxal-phosphate dependent enzyme HQJ03_000390 PF00425 chorismate binding enzyme HQJ03_000390 PF04715 Anthranilate synthase component I, N terminal region HQJ03_000395 PF00117 Glutamine amidotransferase class-I HQJ03_000400 PF01063 Amino-transferase class IV HQJ03_000405 PF00809 Pterin binding enzyme HQJ03_000410 PF02152 Dihydroneopterin aldolase HQJ03_000415 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) HQJ03_000420 PF01381 Helix-turn-helix HQJ03_000425 PF01207 Dihydrouridine synthase (Dus) HQJ03_000430 PF01336 OB-fold nucleic acid binding domain HQJ03_000430 PF00152 tRNA synthetases class II (D, K and N) HQJ03_000520 PF17727 CtsR C-terminal dimerization domain HQJ03_000520 PF05848 CtsR N-terminal HTH domain HQJ03_000525 PF02151 UvrB/uvrC motif HQJ03_000530 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain HQJ03_000535 PF00004 ATPase family associated with various cellular activities (AAA) HQJ03_000535 PF07724 AAA domain (Cdc48 subfamily) HQJ03_000535 PF17871 AAA lid domain HQJ03_000535 PF02861 Clp amino terminal domain, pathogenicity island component HQJ03_000535 PF10431 C-terminal, D2-small domain, of ClpB protein HQJ03_000540 PF18073 Rubredoxin metal binding domain HQJ03_000545 PF02457 DisA bacterial checkpoint controller nucleotide-binding HQJ03_000545 PF10635 DisA bacterial checkpoint controller linker region HQJ03_000555 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase HQJ03_000560 PF02542 YgbB family HQJ03_000565 PF00749 tRNA synthetases class I (E and Q), catalytic domain HQJ03_000570 PF00132 Bacterial transferase hexapeptide (six repeats) HQJ03_000570 PF06426 Serine acetyltransferase, N-terminal HQJ03_000575 PF09190 DALR domain HQJ03_000575 PF01406 tRNA synthetases class I (C) catalytic domain HQJ03_000580 PF00636 Ribonuclease III domain HQJ03_000585 PF08032 RNA 2'-O ribose methyltransferase substrate binding HQJ03_000585 PF00588 SpoU rRNA Methylase family HQJ03_000590 PF05991 YacP-like NYN domain HQJ03_000595 PF04542 Sigma-70 region 2 HQJ03_000595 PF08281 Sigma-70, region 4 HQJ03_000600 PF00471 Ribosomal protein L33 HQJ03_000605 PF00584 SecE/Sec61-gamma subunits of protein translocation complex HQJ03_000610 PF02357 Transcription termination factor nusG HQJ03_000610 PF00467 KOW motif HQJ03_000615 PF03946 Ribosomal protein L11, N-terminal domain HQJ03_000615 PF00298 Ribosomal protein L11, RNA binding domain HQJ03_000620 PF00687 Ribosomal protein L1p/L10e family HQJ03_000625 PF00466 Ribosomal protein L10 HQJ03_000630 PF16320 Ribosomal protein L7/L12 dimerisation domain HQJ03_000630 PF00542 Ribosomal protein L7/L12 C-terminal domain HQJ03_000635 PF05175 Methyltransferase small domain HQJ03_000640 PF00562 RNA polymerase Rpb2, domain 6 HQJ03_000640 PF10385 RNA polymerase beta subunit external 1 domain HQJ03_000640 PF04565 RNA polymerase Rpb2, domain 3 HQJ03_000640 PF04561 RNA polymerase Rpb2, domain 2 HQJ03_000640 PF04563 RNA polymerase beta subunit HQJ03_000640 PF04560 RNA polymerase Rpb2, domain 7 HQJ03_000645 PF04998 RNA polymerase Rpb1, domain 5 HQJ03_000645 PF05000 RNA polymerase Rpb1, domain 4 HQJ03_000645 PF04983 RNA polymerase Rpb1, domain 3 HQJ03_000645 PF00623 RNA polymerase Rpb1, domain 2 HQJ03_000645 PF04997 RNA polymerase Rpb1, domain 1 HQJ03_000650 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family HQJ03_000655 PF00164 Ribosomal protein S12/S23 HQJ03_000660 PF00177 Ribosomal protein S7p/S5e HQJ03_000665 PF00009 Elongation factor Tu GTP binding domain HQJ03_000665 PF14492 Elongation Factor G, domain II HQJ03_000665 PF00679 Elongation factor G C-terminus HQJ03_000665 PF03764 Elongation factor G, domain IV HQJ03_000665 PF03144 Elongation factor Tu domain 2 HQJ03_000670 PF00009 Elongation factor Tu GTP binding domain HQJ03_000670 PF03143 Elongation factor Tu C-terminal domain HQJ03_000670 PF03144 Elongation factor Tu domain 2 HQJ03_000675 PF00338 Ribosomal protein S10p/S20e HQJ03_000680 PF00297 Ribosomal protein L3 HQJ03_000685 PF00573 Ribosomal protein L4/L1 family HQJ03_000690 PF00276 Ribosomal protein L23 HQJ03_000695 PF03947 Ribosomal Proteins L2, C-terminal domain HQJ03_000695 PF00181 Ribosomal Proteins L2, RNA binding domain HQJ03_000700 PF00203 Ribosomal protein S19 HQJ03_000705 PF00237 Ribosomal protein L22p/L17e HQJ03_000710 PF00189 Ribosomal protein S3, C-terminal domain HQJ03_000710 PF07650 KH domain HQJ03_000715 PF00252 Ribosomal protein L16p/L10e HQJ03_000720 PF00831 Ribosomal L29 protein HQJ03_000725 PF00366 Ribosomal protein S17 HQJ03_000730 PF00238 Ribosomal protein L14p/L23e HQJ03_000735 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 HQJ03_000735 PF00467 KOW motif HQJ03_000740 PF00673 ribosomal L5P family C-terminus HQJ03_000740 PF00281 Ribosomal protein L5 HQJ03_000745 PF00253 Ribosomal protein S14p/S29e HQJ03_000750 PF00410 Ribosomal protein S8 HQJ03_000755 PF00347 Ribosomal protein L6 HQJ03_000760 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast HQJ03_000765 PF03719 Ribosomal protein S5, C-terminal domain HQJ03_000765 PF00333 Ribosomal protein S5, N-terminal domain HQJ03_000770 PF00327 Ribosomal protein L30p/L7e HQJ03_000775 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A HQJ03_000780 PF00344 SecY translocase HQJ03_000785 PF05191 Adenylate kinase, active site lid HQJ03_000790 PF00557 Metallopeptidase family M24 HQJ03_000795 PF01176 Translation initiation factor 1A / IF-1 HQJ03_000800 PF00444 Ribosomal protein L36 HQJ03_000805 PF00416 Ribosomal protein S13/S18 HQJ03_000810 PF00411 Ribosomal protein S11 HQJ03_000815 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain HQJ03_000815 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain HQJ03_000815 PF01000 RNA polymerase Rpb3/RpoA insert domain HQJ03_000820 PF01196 Ribosomal protein L17 HQJ03_000825 PF00005 ABC transporter HQJ03_000830 PF00005 ABC transporter HQJ03_000835 PF02361 Cobalt transport protein HQJ03_000840 PF01416 tRNA pseudouridine synthase HQJ03_000845 PF00572 Ribosomal protein L13 HQJ03_000850 PF00380 Ribosomal protein S9/S16 HQJ03_000860 PF01520 N-acetylmuramoyl-L-alanine amidase HQJ03_000865 PF10609 NUBPL iron-transfer P-loop NTPase HQJ03_000870 PF17898 Spore germination GerD central core domain HQJ03_000875 PF14089 KinB-signalling pathway activation in sporulation HQJ03_000880 PF01522 Polysaccharide deacetylase HQJ03_000950 PF02595 Glycerate kinase family HQJ03_000955 PF00491 Arginase family HQJ03_000960 PF02457 DisA bacterial checkpoint controller nucleotide-binding HQJ03_000965 PF07949 YbbR-like protein HQJ03_000970 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HQJ03_000970 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HQJ03_000970 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HQJ03_000970 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HQJ03_000980 PF01380 SIS domain HQJ03_000990 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region HQJ03_000990 PF00326 Prolyl oligopeptidase family HQJ03_001020 PF00528 Binding-protein-dependent transport system inner membrane component HQJ03_001025 PF09383 NIL domain HQJ03_001025 PF00005 ABC transporter HQJ03_001030 PF03180 NLPA lipoprotein HQJ03_001035 PF00107 Zinc-binding dehydrogenase HQJ03_001035 PF08240 Alcohol dehydrogenase GroES-like domain HQJ03_001045 PF01565 FAD binding domain HQJ03_001050 PF07690 Major Facilitator Superfamily HQJ03_001060 PF07690 Major Facilitator Superfamily HQJ03_001080 PF12833 Helix-turn-helix domain HQJ03_001095 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HQJ03_001100 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HQJ03_001105 PF00248 Aldo/keto reductase family HQJ03_001110 PF03807 NADP oxidoreductase coenzyme F420-dependent HQJ03_001110 PF14748 Pyrroline-5-carboxylate reductase dimerisation HQJ03_001115 PF04973 Nicotinamide mononucleotide transporter HQJ03_001120 PF06800 Sugar transport protein HQJ03_001125 PF00528 Binding-protein-dependent transport system inner membrane component HQJ03_001135 PF12727 PBP superfamily domain HQJ03_001135 PF12728 Helix-turn-helix domain HQJ03_001145 PF03466 LysR substrate binding domain HQJ03_001145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HQJ03_001150 PF00892 EamA-like transporter family HQJ03_001155 PF14142 YrzO-like protein HQJ03_001165 PF01553 Acyltransferase HQJ03_001175 PF00356 Bacterial regulatory proteins, lacI family HQJ03_001175 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family HQJ03_001185 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) HQJ03_001185 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 HQJ03_001200 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) HQJ03_001225 PF00005 ABC transporter HQJ03_001225 PF12848 ABC transporter HQJ03_001225 PF16326 ABC transporter C-terminal domain HQJ03_001235 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HQJ03_001240 PF00528 Binding-protein-dependent transport system inner membrane component HQJ03_001245 PF00528 Binding-protein-dependent transport system inner membrane component HQJ03_001245 PF12911 N-terminal TM domain of oligopeptide transport permease C HQJ03_001250 PF00005 ABC transporter HQJ03_001250 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HQJ03_001255 PF00005 ABC transporter HQJ03_001255 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HQJ03_001290 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HQJ03_001295 PF01557 Fumarylacetoacetate (FAA) hydrolase family HQJ03_001305 PF13520 Amino acid permease HQJ03_001310 PF07690 Major Facilitator Superfamily HQJ03_001315 PF01820 D-ala D-ala ligase N-terminus HQJ03_001315 PF07478 D-ala D-ala ligase C-terminus HQJ03_001320 PF08245 Mur ligase middle domain HQJ03_001320 PF01225 Mur ligase family, catalytic domain HQJ03_001320 PF02875 Mur ligase family, glutamate ligase domain HQJ03_001325 PF00271 Helicase conserved C-terminal domain HQJ03_001325 PF00270 DEAD/DEAH box helicase HQJ03_001330 PF03851 UV-endonuclease UvdE HQJ03_001335 PF01694 Rhomboid family HQJ03_001340 PF01648 4'-phosphopantetheinyl transferase superfamily HQJ03_001350 PF01168 Alanine racemase, N-terminal domain HQJ03_001350 PF00842 Alanine racemase, C-terminal domain HQJ03_001355 PF01402 Ribbon-helix-helix protein, copG family HQJ03_001360 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system HQJ03_001365 PF00575 S1 RNA binding domain HQJ03_001365 PF16921 Tex protein YqgF-like domain HQJ03_001365 PF09371 Tex-like protein N-terminal domain HQJ03_001365 PF17674 HHH domain HQJ03_001375 PF10263 SprT-like family HQJ03_001375 PF17283 SprT-like zinc ribbon domain HQJ03_001465 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE HQJ03_001470 PF00814 Glycoprotease family HQJ03_001475 PF00583 Acetyltransferase (GNAT) family HQJ03_001480 PF00814 Glycoprotease family HQJ03_001485 PF16326 ABC transporter C-terminal domain HQJ03_001485 PF00005 ABC transporter HQJ03_001485 PF12848 ABC transporter HQJ03_001490 PF02629 CoA binding domain HQJ03_001490 PF06971 Putative DNA-binding protein N-terminus HQJ03_001500 PF02517 CPBP intramembrane metalloprotease HQJ03_001505 PF00166 Chaperonin 10 Kd subunit HQJ03_001510 PF00118 TCP-1/cpn60 chaperonin family HQJ03_001515 PF00117 Glutamine amidotransferase class-I HQJ03_001515 PF00958 GMP synthase C terminal domain HQJ03_001515 PF02540 NAD synthase HQJ03_001520 PF00860 Permease family HQJ03_001525 PF00486 Transcriptional regulatory protein, C terminal HQJ03_001525 PF00072 Response regulator receiver domain HQJ03_001530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQJ03_001530 PF00989 PAS fold HQJ03_001530 PF16736 Single Cache-like HQJ03_001530 PF00512 His Kinase A (phospho-acceptor) domain HQJ03_001555 PF01323 DSBA-like thioredoxin domain HQJ03_001580 PF02673 Bacitracin resistance protein BacA HQJ03_001590 PF00005 ABC transporter HQJ03_001595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQJ03_001595 PF00512 His Kinase A (phospho-acceptor) domain HQJ03_001600 PF00072 Response regulator receiver domain HQJ03_001600 PF00486 Transcriptional regulatory protein, C terminal HQJ03_001620 PF05045 Rhamnan synthesis protein F HQJ03_001620 PF14307 Glycosyltransferase WbsX HQJ03_001630 PF08241 Methyltransferase domain HQJ03_001640 PF16363 GDP-mannose 4,6 dehydratase HQJ03_001650 PF00535 Glycosyl transferase family 2 HQJ03_001670 PF00892 EamA-like transporter family HQJ03_001700 PF00731 AIR carboxylase HQJ03_001705 PF02222 ATP-grasp domain HQJ03_001705 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain HQJ03_001710 PF10397 Adenylosuccinate lyase C-terminus HQJ03_001710 PF00206 Lyase HQJ03_001715 PF01259 SAICAR synthetase HQJ03_001720 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase HQJ03_001730 PF00586 AIR synthase related protein, N-terminal domain HQJ03_001730 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain HQJ03_001730 PF02769 AIR synthase related protein, C-terminal domain HQJ03_001735 PF00156 Phosphoribosyl transferase domain HQJ03_001740 PF00586 AIR synthase related protein, N-terminal domain HQJ03_001740 PF02769 AIR synthase related protein, C-terminal domain HQJ03_001745 PF00551 Formyl transferase HQJ03_001750 PF02142 MGS-like domain HQJ03_001750 PF01808 AICARFT/IMPCHase bienzyme HQJ03_001755 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain HQJ03_001755 PF02843 Phosphoribosylglycinamide synthetase, C domain HQJ03_001755 PF02844 Phosphoribosylglycinamide synthetase, N domain HQJ03_001775 PF01884 PcrB family HQJ03_001780 PF00580 UvrD/REP helicase N-terminal domain HQJ03_001780 PF13361 UvrD-like helicase C-terminal domain HQJ03_001785 PF03120 NAD-dependent DNA ligase OB-fold domain HQJ03_001785 PF00533 BRCA1 C Terminus (BRCT) domain HQJ03_001785 PF01653 NAD-dependent DNA ligase adenylation domain HQJ03_001785 PF03119 NAD-dependent DNA ligase C4 zinc finger domain HQJ03_001785 PF12826 Helix-hairpin-helix motif HQJ03_001790 PF07537 CamS sex pheromone cAM373 precursor HQJ03_001795 PF01925 Sulfite exporter TauE/SafE HQJ03_001800 PF00171 Aldehyde dehydrogenase family HQJ03_001805 PF00857 Isochorismatase family HQJ03_001810 PF09383 NIL domain HQJ03_001810 PF00005 ABC transporter HQJ03_001815 PF00528 Binding-protein-dependent transport system inner membrane component HQJ03_001820 PF03180 NLPA lipoprotein HQJ03_001825 PF05360 yiaA/B two helix domain HQJ03_001830 PF02686 Glu-tRNAGln amidotransferase C subunit HQJ03_001835 PF01425 Amidase HQJ03_001840 PF02637 GatB domain HQJ03_001840 PF02934 GatB/GatE catalytic domain HQJ03_001845 PF00781 Diacylglycerol kinase catalytic domain HQJ03_001850 PF13419 Haloacid dehalogenase-like hydrolase HQJ03_001855 PF00202 Aminotransferase class-III HQJ03_001860 PF00158 Sigma-54 interaction domain HQJ03_001865 PF00171 Aldehyde dehydrogenase family HQJ03_001870 PF00893 Small Multidrug Resistance protein HQJ03_001880 PF02073 Thermophilic metalloprotease (M29) HQJ03_001900 PF07670 Nucleoside recognition HQJ03_001900 PF01773 Na+ dependent nucleoside transporter N-terminus HQJ03_001900 PF07662 Na+ dependent nucleoside transporter C-terminus HQJ03_001905 PF13847 Methyltransferase domain HQJ03_001905 PF05958 tRNA (Uracil-5-)-methyltransferase HQJ03_001905 PF01938 TRAM domain HQJ03_001910 PF01207 Dihydrouridine synthase (Dus) HQJ03_001925 PF07308 Protein of unknown function (DUF1456) HQJ03_001940 PF13378 Enolase C-terminal domain-like HQJ03_001940 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain HQJ03_001950 PF03553 Na+/H+ antiporter family HQJ03_001955 PF07687 Peptidase dimerisation domain HQJ03_001955 PF01546 Peptidase family M20/M25/M40 HQJ03_001970 PF07992 Pyridine nucleotide-disulphide oxidoreductase HQJ03_001970 PF13192 Thioredoxin domain HQJ03_001975 PF00578 AhpC/TSA family HQJ03_001980 PF01636 Phosphotransferase enzyme family HQJ03_001985 PF01008 Initiation factor 2 subunit family HQJ03_001990 PF00596 Class II Aldolase and Adducin N-terminal domain HQJ03_001995 PF01032 FecCD transport family HQJ03_002000 PF01032 FecCD transport family HQJ03_002005 PF01497 Periplasmic binding protein HQJ03_002010 PF07992 Pyridine nucleotide-disulphide oxidoreductase HQJ03_002020 PF12728 Helix-turn-helix domain HQJ03_002045 PF13426 PAS domain HQJ03_002045 PF00989 PAS fold HQJ03_002045 PF00512 His Kinase A (phospho-acceptor) domain HQJ03_002045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQJ03_002045 PF13188 PAS domain HQJ03_002065 PF10127 RNA repair pathway DNA polymerase beta family HQJ03_002070 PF07690 Major Facilitator Superfamily HQJ03_002075 PF01266 FAD dependent oxidoreductase HQJ03_002075 PF00355 Rieske [2Fe-2S] domain HQJ03_002085 PF00528 Binding-protein-dependent transport system inner membrane component HQJ03_002090 PF00497 Bacterial extracellular solute-binding proteins, family 3 HQJ03_002095 PF00005 ABC transporter HQJ03_002100 PF12729 Four helix bundle sensory module for signal transduction HQJ03_002100 PF00672 HAMP domain HQJ03_002100 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HQJ03_002105 PF02863 Arginine repressor, C-terminal domain HQJ03_002105 PF01316 Arginine repressor, DNA binding domain HQJ03_002115 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HQJ03_002115 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HQJ03_002120 PF13520 Amino acid permease HQJ03_002125 PF00696 Amino acid kinase family HQJ03_002130 PF00027 Cyclic nucleotide-binding domain HQJ03_002130 PF13545 Crp-like helix-turn-helix domain HQJ03_002140 PF01565 FAD binding domain HQJ03_002140 PF08031 Berberine and berberine like HQJ03_002145 PF16657 Maltogenic Amylase, C-terminal domain HQJ03_002145 PF00128 Alpha amylase, catalytic domain HQJ03_002150 PF02378 Phosphotransferase system, EIIC HQJ03_002150 PF00367 phosphotransferase system, EIIB HQJ03_002150 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 HQJ03_002155 PF03372 Endonuclease/Exonuclease/phosphatase family HQJ03_002160 PF01061 ABC-2 type transporter HQJ03_002165 PF01131 DNA topoisomerase HQJ03_002165 PF01751 Toprim domain HQJ03_002170 PF02110 Hydroxyethylthiazole kinase family HQJ03_002175 PF02581 Thiamine monophosphate synthase HQJ03_002180 PF03605 Anaerobic c4-dicarboxylate membrane transporter HQJ03_002185 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HQJ03_002185 PF00672 HAMP domain HQJ03_002190 PF00668 Condensation domain HQJ03_002190 PF00550 Phosphopantetheine attachment site HQJ03_002190 PF00975 Thioesterase domain HQJ03_002190 PF00501 AMP-binding enzyme HQJ03_002190 PF13193 AMP-binding enzyme C-terminal domain HQJ03_002195 PF01910 Thiamine-binding protein HQJ03_002200 PF00528 Binding-protein-dependent transport system inner membrane component HQJ03_002210 PF00005 ABC transporter HQJ03_002215 PF00005 ABC transporter HQJ03_002215 PF12848 ABC transporter HQJ03_002220 PF00704 Glycosyl hydrolases family 18 HQJ03_002220 PF00041 Fibronectin type III domain HQJ03_002245 PF08360 QacR-like protein, C-terminal region HQJ03_002245 PF00440 Bacterial regulatory proteins, tetR family HQJ03_002260 PF11700 Vacuole effluxer Atg22 like HQJ03_002275 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HQJ03_002275 PF09180 Prolyl-tRNA synthetase, C-terminal HQJ03_002275 PF03129 Anticodon binding domain HQJ03_002285 PF00480 ROK family HQJ03_002290 PF02342 TerD domain HQJ03_002295 PF02342 TerD domain HQJ03_002300 PF02342 TerD domain HQJ03_002305 PF03741 Integral membrane protein TerC family HQJ03_002310 PF14266 Putative component of 'biosynthetic module' HQJ03_002315 PF05816 Toxic anion resistance protein (TelA) HQJ03_002320 PF00690 Cation transporter/ATPase, N-terminus HQJ03_002320 PF00689 Cation transporting ATPase, C-terminus HQJ03_002325 PF06569 Protein of unknown function (DUF1128) HQJ03_002330 PF01451 Low molecular weight phosphotyrosine protein phosphatase HQJ03_002340 PF03631 Virulence factor BrkB HQJ03_002350 PF00892 EamA-like transporter family HQJ03_002360 PF10502 Signal peptidase, peptidase S26 HQJ03_002370 PF09335 SNARE associated Golgi protein HQJ03_002385 PF16242 Pyridoxamine 5'-phosphate oxidase like HQJ03_002390 PF01699 Sodium/calcium exchanger protein HQJ03_002395 PF14167 YfkD-like protein HQJ03_002400 PF04055 Radical SAM superfamily HQJ03_002400 PF08756 YfkB-like domain HQJ03_002410 PF05683 Fumarase C-terminus HQJ03_002410 PF05681 Fumarate hydratase (Fumerase) HQJ03_002415 PF01522 Polysaccharide deacetylase HQJ03_002420 PF00730 HhH-GPD superfamily base excision DNA repair protein HQJ03_002425 PF01938 TRAM domain HQJ03_002425 PF05958 tRNA (Uracil-5-)-methyltransferase HQJ03_002430 PF01416 tRNA pseudouridine synthase HQJ03_002440 PF13426 PAS domain HQJ03_002440 PF02954 Bacterial regulatory protein, Fis family HQJ03_002440 PF00158 Sigma-54 interaction domain HQJ03_002450 PF00324 Amino acid permease HQJ03_002455 PF07687 Peptidase dimerisation domain HQJ03_002455 PF01546 Peptidase family M20/M25/M40 HQJ03_002480 PF04960 Glutaminase HQJ03_002485 PF02378 Phosphotransferase system, EIIC HQJ03_002485 PF00367 phosphotransferase system, EIIB HQJ03_002490 PF00144 Beta-lactamase HQJ03_002505 PF00535 Glycosyl transferase family 2 HQJ03_002510 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain HQJ03_002510 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain HQJ03_002510 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain HQJ03_002515 PF01370 NAD dependent epimerase/dehydratase family HQJ03_002515 PF02911 Formyl transferase, C-terminal domain HQJ03_002515 PF00551 Formyl transferase HQJ03_002520 PF00535 Glycosyl transferase family 2 HQJ03_002530 PF01228 Glycine radical HQJ03_002530 PF02901 Pyruvate formate lyase-like HQJ03_002535 PF04055 Radical SAM superfamily HQJ03_002540 PF04101 Glycosyltransferase family 28 C-terminal domain HQJ03_002540 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase HQJ03_002555 PF01979 Amidohydrolase family HQJ03_002560 PF01370 NAD dependent epimerase/dehydratase family HQJ03_002560 PF08338 Domain of unknown function (DUF1731) HQJ03_002565 PF02631 RecX family HQJ03_002580 PF08176 Small acid-soluble spore protein K family HQJ03_002585 PF14043 WVELL protein HQJ03_002590 PF04307 LexA-binding, inner membrane-associated putative hydrolase HQJ03_002595 PF00730 HhH-GPD superfamily base excision DNA repair protein HQJ03_002595 PF14815 NUDIX domain HQJ03_002605 PF04259 Small, acid-soluble spore protein, gamma-type HQJ03_002610 PF14182 YgaB-like protein HQJ03_002615 PF04167 Protein of unknown function (DUF402) HQJ03_002620 PF00664 ABC transporter transmembrane region HQJ03_002620 PF00005 ABC transporter HQJ03_002625 PF06081 Aromatic acid exporter family member 1 HQJ03_002630 PF01645 Conserved region in glutamate synthase HQJ03_002630 PF01493 GXGXG motif HQJ03_002630 PF00310 Glutamine amidotransferases class-II HQJ03_002630 PF04898 Glutamate synthase central domain HQJ03_002635 PF00202 Aminotransferase class-III HQJ03_002640 PF00005 ABC transporter HQJ03_002655 PF07885 Ion channel HQJ03_002660 PF00578 AhpC/TSA family HQJ03_002665 PF01475 Ferric uptake regulator family HQJ03_002675 PF11023 Zinc-ribbon containing domain HQJ03_002775 PF01709 Transcriptional regulator HQJ03_002780 PF00293 NUDIX domain HQJ03_002780 PF13344 Haloacid dehalogenase-like hydrolase HQJ03_002785 PF00912 Transglycosylase HQJ03_002785 PF00905 Penicillin binding protein transpeptidase domain HQJ03_002790 PF13462 Thioredoxin HQJ03_002800 PF08331 Domain of unknown function (DUF1730) HQJ03_002805 PF12671 Putative amidase domain HQJ03_002810 PF00588 SpoU rRNA Methylase family HQJ03_002815 PF03707 Bacterial signalling protein N terminal repeat HQJ03_002815 PF00990 Diguanylate cyclase, GGDEF domain HQJ03_002815 PF00563 EAL domain HQJ03_002820 PF06798 PrkA serine protein kinase C-terminal domain HQJ03_002820 PF08298 PrkA AAA domain HQJ03_002825 PF04285 Protein of unknown function (DUF444) HQJ03_002840 PF02028 BCCT, betaine/carnitine/choline family transporter HQJ03_002845 PF18496 Collagenase G catalytic helper subdomain HQJ03_002845 PF01752 Collagenase HQJ03_002845 PF08453 Peptidase family M9 N-terminal HQJ03_002855 PF01145 SPFH domain / Band 7 family HQJ03_002855 PF15975 Flotillin HQJ03_002860 PF02743 Cache domain HQJ03_002860 PF00672 HAMP domain HQJ03_002860 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HQJ03_002865 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain HQJ03_002865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQJ03_002865 PF00989 PAS fold HQJ03_002865 PF17203 Single cache domain 3 HQJ03_002870 PF00072 Response regulator receiver domain HQJ03_002870 PF12431 Transcriptional regulator HQJ03_002875 PF03600 Citrate transporter HQJ03_002900 PF04309 Glycerol-3-phosphate responsive antiterminator HQJ03_002905 PF00005 ABC transporter HQJ03_002905 PF17912 MalK OB fold domain HQJ03_002910 PF00528 Binding-protein-dependent transport system inner membrane component HQJ03_002915 PF00528 Binding-protein-dependent transport system inner membrane component HQJ03_002920 PF13416 Bacterial extracellular solute-binding protein HQJ03_002925 PF00149 Calcineurin-like phosphoesterase HQJ03_002930 PF00486 Transcriptional regulatory protein, C terminal HQJ03_002930 PF00072 Response regulator receiver domain HQJ03_002935 PF00512 His Kinase A (phospho-acceptor) domain HQJ03_002935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQJ03_002945 PF13529 Peptidase_C39 like family HQJ03_002950 PF02743 Cache domain HQJ03_002950 PF00672 HAMP domain HQJ03_002950 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HQJ03_002955 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain HQJ03_002955 PF17203 Single cache domain 3 HQJ03_002955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQJ03_002955 PF00989 PAS fold HQJ03_002960 PF00072 Response regulator receiver domain HQJ03_002965 PF03390 2-hydroxycarboxylate transporter family HQJ03_002970 PF00390 Malic enzyme, N-terminal domain HQJ03_002970 PF03949 Malic enzyme, NAD binding domain HQJ03_002980 PF00892 EamA-like transporter family HQJ03_002985 PF00392 Bacterial regulatory proteins, gntR family HQJ03_002985 PF00155 Aminotransferase class I and II HQJ03_002995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQJ03_002995 PF18698 Histidine kinase sensor domain HQJ03_002995 PF00512 His Kinase A (phospho-acceptor) domain HQJ03_002995 PF00989 PAS fold HQJ03_002995 PF00672 HAMP domain HQJ03_003000 PF00486 Transcriptional regulatory protein, C terminal HQJ03_003000 PF00072 Response regulator receiver domain HQJ03_003010 PF02634 FdhD/NarQ family HQJ03_003015 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HQJ03_003015 PF01568 Molydopterin dinucleotide binding domain HQJ03_003015 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region HQJ03_003015 PF00037 4Fe-4S binding domain HQJ03_003015 PF00384 Molybdopterin oxidoreductase HQJ03_003020 PF07849 Protein of unknown function (DUF1641) HQJ03_003030 PF01262 Alanine dehydrogenase/PNT, C-terminal domain HQJ03_003030 PF05222 Alanine dehydrogenase/PNT, N-terminal domain HQJ03_003035 PF13520 Amino acid permease HQJ03_003045 PF01022 Bacterial regulatory protein, arsR family HQJ03_003050 PF00403 Heavy-metal-associated domain HQJ03_003055 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain HQJ03_003055 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family HQJ03_003055 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain HQJ03_003070 PF01447 Thermolysin metallopeptidase, catalytic domain HQJ03_003070 PF02868 Thermolysin metallopeptidase, alpha-helical domain HQJ03_003070 PF03413 Peptidase propeptide and YPEB domain HQJ03_003070 PF07504 Fungalysin/Thermolysin Propeptide Motif HQJ03_003090 PF04294 VanW like protein HQJ03_003095 PF03816 Cell envelope-related transcriptional attenuator domain HQJ03_003100 PF07662 Na+ dependent nucleoside transporter C-terminus HQJ03_003100 PF01773 Na+ dependent nucleoside transporter N-terminus HQJ03_003105 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HQJ03_003110 PF00571 CBS domain HQJ03_003110 PF03471 Transporter associated domain HQJ03_003110 PF01595 Cyclin M transmembrane N-terminal domain HQJ03_003115 PF10415 Fumarase C C-terminus HQJ03_003115 PF00206 Lyase HQJ03_003120 PF02652 L-lactate permease HQJ03_003125 PF01022 Bacterial regulatory protein, arsR family HQJ03_003130 PF08141 Small acid-soluble spore protein H family HQJ03_003135 PF00854 POT family HQJ03_003140 PF01497 Periplasmic binding protein HQJ03_003145 PF01032 FecCD transport family HQJ03_003150 PF01032 FecCD transport family HQJ03_003155 PF00005 ABC transporter HQJ03_003165 PF00155 Aminotransferase class I and II HQJ03_003170 PF01370 NAD dependent epimerase/dehydratase family HQJ03_003175 PF00293 NUDIX domain HQJ03_003175 PF13344 Haloacid dehalogenase-like hydrolase HQJ03_003180 PF00092 von Willebrand factor type A domain HQJ03_003185 PF07728 AAA domain (dynein-related subfamily) HQJ03_003190 PF13091 PLD-like domain HQJ03_003190 PF13396 Phospholipase_D-nuclease N-terminal HQJ03_003200 PF03707 Bacterial signalling protein N terminal repeat HQJ03_003200 PF00990 Diguanylate cyclase, GGDEF domain HQJ03_003200 PF00563 EAL domain HQJ03_003205 PF13520 Amino acid permease HQJ03_003210 PF00392 Bacterial regulatory proteins, gntR family HQJ03_003210 PF07702 UTRA domain HQJ03_003215 PF00367 phosphotransferase system, EIIB HQJ03_003215 PF02378 Phosphotransferase system, EIIC HQJ03_003220 PF00128 Alpha amylase, catalytic domain HQJ03_003220 PF16657 Maltogenic Amylase, C-terminal domain HQJ03_003235 PF03323 Bacillus/Clostridium GerA spore germination protein HQJ03_003240 PF13492 GAF domain HQJ03_003240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQJ03_003240 PF07730 Histidine kinase HQJ03_003245 PF00072 Response regulator receiver domain HQJ03_003245 PF00196 Bacterial regulatory proteins, luxR family HQJ03_003250 PF02225 PA domain HQJ03_003250 PF00082 Subtilase family HQJ03_003250 PF13860 FlgD Ig-like domain HQJ03_003250 PF05922 Peptidase inhibitor I9 HQJ03_003255 PF12389 Camelysin metallo-endopeptidase HQJ03_003260 PF01636 Phosphotransferase enzyme family HQJ03_003265 PF01235 Sodium:alanine symporter family HQJ03_003270 PF00005 ABC transporter HQJ03_003275 PF00497 Bacterial extracellular solute-binding proteins, family 3 HQJ03_003280 PF00528 Binding-protein-dependent transport system inner membrane component HQJ03_003285 PF00528 Binding-protein-dependent transport system inner membrane component HQJ03_003290 PF00324 Amino acid permease HQJ03_003305 PF04542 Sigma-70 region 2 HQJ03_003305 PF08281 Sigma-70, region 4 HQJ03_003315 PF08279 HTH domain HQJ03_003315 PF13280 WYL domain HQJ03_003320 PF01872 RibD C-terminal domain HQJ03_003325 PF00672 HAMP domain HQJ03_003325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQJ03_003325 PF18698 Histidine kinase sensor domain HQJ03_003325 PF00512 His Kinase A (phospho-acceptor) domain HQJ03_003325 PF00989 PAS fold HQJ03_003330 PF00486 Transcriptional regulatory protein, C terminal HQJ03_003330 PF00072 Response regulator receiver domain HQJ03_003340 PF01740 STAS domain HQJ03_003340 PF00916 Sulfate permease family HQJ03_003345 PF00582 Universal stress protein family HQJ03_003355 PF07690 Major Facilitator Superfamily HQJ03_003360 PF01047 MarR family HQJ03_003365 PF07690 Major Facilitator Superfamily HQJ03_003370 PF00356 Bacterial regulatory proteins, lacI family HQJ03_003375 PF00294 pfkB family carbohydrate kinase HQJ03_003380 PF05025 RbsD / FucU transport protein family HQJ03_003385 PF00005 ABC transporter HQJ03_003390 PF02653 Branched-chain amino acid transport system / permease component HQJ03_003395 PF13407 Periplasmic binding protein domain HQJ03_003400 PF00923 Transaldolase/Fructose-6-phosphate aldolase HQJ03_003405 PF05547 Immune inhibitor A peptidase M6 HQJ03_003420 PF00107 Zinc-binding dehydrogenase HQJ03_003420 PF08240 Alcohol dehydrogenase GroES-like domain HQJ03_003430 PF00882 Zinc dependent phospholipase C HQJ03_003435 PF03372 Endonuclease/Exonuclease/phosphatase family HQJ03_003465 PF02673 Bacitracin resistance protein BacA HQJ03_003470 PF00672 HAMP domain HQJ03_003470 PF02743 Cache domain HQJ03_003470 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HQJ03_003475 PF01476 LysM domain HQJ03_003475 PF06725 3D domain HQJ03_003480 PF01381 Helix-turn-helix HQJ03_003490 PF04203 Sortase domain HQJ03_003500 PF00854 POT family HQJ03_003505 PF05525 Branched-chain amino acid transport protein HQJ03_003520 PF00324 Amino acid permease HQJ03_003525 PF00860 Permease family HQJ03_003535 PF07282 Putative transposase DNA-binding domain HQJ03_003535 PF01385 Probable transposase HQJ03_003535 PF12323 Helix-turn-helix domain HQJ03_003550 PF13673 Acetyltransferase (GNAT) domain HQJ03_003560 PF00999 Sodium/hydrogen exchanger family HQJ03_003560 PF02080 TrkA-C domain HQJ03_003560 PF02254 TrkA-N domain HQJ03_003570 PF00510 Cytochrome c oxidase subunit III HQJ03_003575 PF00115 Cytochrome C and Quinol oxidase polypeptide I HQJ03_003580 PF02790 Cytochrome C oxidase subunit II, transmembrane domain HQJ03_003585 PF00324 Amino acid permease HQJ03_003590 PF13529 Peptidase_C39 like family HQJ03_003595 PF07687 Peptidase dimerisation domain HQJ03_003595 PF01546 Peptidase family M20/M25/M40 HQJ03_003600 PF11755 Protein of unknown function (DUF3311) HQJ03_003605 PF00474 Sodium:solute symporter family HQJ03_003610 PF03323 Bacillus/Clostridium GerA spore germination protein HQJ03_003615 PF03845 Spore germination protein HQJ03_003620 PF05504 Spore germination B3/ GerAC like, C-terminal HQJ03_003630 PF07670 Nucleoside recognition HQJ03_003630 PF02421 Ferrous iron transport protein B HQJ03_003630 PF17910 FeoB cytosolic helical domain HQJ03_003630 PF07664 Ferrous iron transport protein B C terminus HQJ03_003635 PF17910 FeoB cytosolic helical domain HQJ03_003635 PF02421 Ferrous iron transport protein B HQJ03_003635 PF07670 Nucleoside recognition HQJ03_003635 PF07664 Ferrous iron transport protein B C terminus HQJ03_003640 PF07670 Nucleoside recognition HQJ03_003640 PF02421 Ferrous iron transport protein B HQJ03_003640 PF17910 FeoB cytosolic helical domain HQJ03_003640 PF04023 FeoA domain HQJ03_003640 PF07664 Ferrous iron transport protein B C terminus HQJ03_003645 PF12849 PBP superfamily domain HQJ03_003650 PF00528 Binding-protein-dependent transport system inner membrane component HQJ03_003655 PF00528 Binding-protein-dependent transport system inner membrane component HQJ03_003665 PF00873 AcrB/AcrD/AcrF family HQJ03_003790 PF00571 CBS domain HQJ03_003805 PF00246 Zinc carboxypeptidase HQJ03_003805 PF08239 Bacterial SH3 domain HQJ03_003810 PF03070 TENA/THI-4/PQQC family HQJ03_003815 PF00005 ABC transporter HQJ03_003820 PF00528 Binding-protein-dependent transport system inner membrane component HQJ03_003825 PF09084 NMT1/THI5 like HQJ03_003830 PF02581 Thiamine monophosphate synthase HQJ03_003835 PF01266 FAD dependent oxidoreductase HQJ03_003840 PF02597 ThiS family HQJ03_003845 PF05690 Thiazole biosynthesis protein ThiG HQJ03_003850 PF00899 ThiF family HQJ03_003855 PF08543 Phosphomethylpyrimidine kinase HQJ03_003880 PF03814 Potassium-transporting ATPase A subunit HQJ03_003890 PF02669 K+-transporting ATPase, c chain HQJ03_003895 PF02702 Osmosensitive K+ channel His kinase sensor domain HQJ03_003900 PF07690 Major Facilitator Superfamily HQJ03_003905 PF01047 MarR family HQJ03_003915 PF00860 Permease family HQJ03_003925 PF17969 L,D-transpeptidase C-terminal domain HQJ03_003925 PF03734 L,D-transpeptidase catalytic domain HQJ03_003935 PF00294 pfkB family carbohydrate kinase HQJ03_003940 PF08244 Glycosyl hydrolases family 32 C terminal HQJ03_003940 PF00251 Glycosyl hydrolases family 32 N-terminal domain HQJ03_003945 PF02378 Phosphotransferase system, EIIC HQJ03_003945 PF00367 phosphotransferase system, EIIB HQJ03_003950 PF13407 Periplasmic binding protein domain HQJ03_003950 PF00356 Bacterial regulatory proteins, lacI family HQJ03_003960 PF00085 Thioredoxin HQJ03_003965 PF02600 Disulfide bond formation protein DsbB HQJ03_003970 PF14148 YhdB-like protein HQJ03_003980 PF03845 Spore germination protein HQJ03_003990 PF03323 Bacillus/Clostridium GerA spore germination protein HQJ03_004000 PF00881 Nitroreductase family HQJ03_004005 PF04293 SpoVR like protein HQJ03_004015 PF01614 Bacterial transcriptional regulator HQJ03_004015 PF09339 IclR helix-turn-helix domain HQJ03_004030 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HQJ03_004030 PF07992 Pyridine nucleotide-disulphide oxidoreductase HQJ03_004035 PF02583 Metal-sensitive transcriptional repressor HQJ03_004040 PF01206 Sulfurtransferase TusA HQJ03_004040 PF00581 Rhodanese-like domain HQJ03_004045 PF00753 Metallo-beta-lactamase superfamily HQJ03_004045 PF00581 Rhodanese-like domain HQJ03_004050 PF01206 Sulfurtransferase TusA HQJ03_004055 PF01206 Sulfurtransferase TusA HQJ03_004055 PF00581 Rhodanese-like domain HQJ03_004060 PF00581 Rhodanese-like domain HQJ03_004065 PF13686 DsrE/DsrF/DrsH-like family HQJ03_004070 PF01925 Sulfite exporter TauE/SafE HQJ03_004080 PF03816 Cell envelope-related transcriptional attenuator domain HQJ03_004085 PF08240 Alcohol dehydrogenase GroES-like domain HQJ03_004085 PF00107 Zinc-binding dehydrogenase HQJ03_004090 PF02690 Na+/Pi-cotransporter HQJ03_004095 PF07690 Major Facilitator Superfamily HQJ03_004105 PF05043 Mga helix-turn-helix domain HQJ03_004105 PF00874 PRD domain HQJ03_004105 PF08279 HTH domain HQJ03_004105 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HQJ03_004110 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit HQJ03_004115 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HQJ03_004120 PF02378 Phosphotransferase system, EIIC HQJ03_004140 PF01476 LysM domain HQJ03_004140 PF06725 3D domain HQJ03_004145 PF02687 FtsX-like permease family HQJ03_004145 PF12704 MacB-like periplasmic core domain HQJ03_004150 PF00005 ABC transporter HQJ03_004160 PF09529 Integral membrane protein (intg_mem_TP0381) HQJ03_004175 PF05525 Branched-chain amino acid transport protein HQJ03_004180 PF05067 Manganese containing catalase HQJ03_004185 PF12652 CotJB protein HQJ03_004190 PF11007 Spore coat associated protein JA (CotJA) HQJ03_004205 PF02735 Ku70/Ku80 beta-barrel domain HQJ03_004215 PF09335 SNARE associated Golgi protein HQJ03_004255 PF13520 Amino acid permease HQJ03_004260 PF00999 Sodium/hydrogen exchanger family HQJ03_004270 PF01418 Helix-turn-helix domain, rpiR family HQJ03_004270 PF01380 SIS domain HQJ03_004275 PF13580 SIS domain HQJ03_004280 PF02378 Phosphotransferase system, EIIC HQJ03_004280 PF00367 phosphotransferase system, EIIB HQJ03_004290 PF07681 DoxX HQJ03_004305 PF00892 EamA-like transporter family HQJ03_004310 PF01037 Lrp/AsnC ligand binding domain HQJ03_004315 PF14698 Argininosuccinate lyase C-terminal HQJ03_004315 PF00583 Acetyltransferase (GNAT) family HQJ03_004315 PF00206 Lyase HQJ03_004320 PF00106 short chain dehydrogenase HQJ03_004325 PF13411 MerR HTH family regulatory protein HQJ03_004330 PF00893 Small Multidrug Resistance protein HQJ03_004340 PF00440 Bacterial regulatory proteins, tetR family HQJ03_004340 PF17934 Tetracyclin repressor-like, C-terminal domain HQJ03_004345 PF07690 Major Facilitator Superfamily HQJ03_004350 PF01638 HxlR-like helix-turn-helix HQJ03_004360 PF02525 Flavodoxin-like fold HQJ03_004365 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HQJ03_004365 PF12793 Sugar transport-related sRNA regulator N-term HQJ03_004370 PF07690 Major Facilitator Superfamily HQJ03_004380 PF01965 DJ-1/PfpI family HQJ03_004385 PF18011 C-terminal domain found in long catalases HQJ03_004385 PF06628 Catalase-related immune-responsive HQJ03_004385 PF00199 Catalase HQJ03_004395 PF13520 Amino acid permease HQJ03_004400 PF01177 Asp/Glu/Hydantoin racemase HQJ03_004410 PF00171 Aldehyde dehydrogenase family HQJ03_004415 PF00664 ABC transporter transmembrane region HQJ03_004415 PF00005 ABC transporter HQJ03_004420 PF00664 ABC transporter transmembrane region HQJ03_004420 PF00005 ABC transporter HQJ03_004425 PF00497 Bacterial extracellular solute-binding proteins, family 3 HQJ03_004430 PF00528 Binding-protein-dependent transport system inner membrane component HQJ03_004435 PF00005 ABC transporter HQJ03_004440 PF00269 Small, acid-soluble spore proteins, alpha/beta type HQJ03_004450 PF14398 YheC/D like ATP-grasp HQJ03_004460 PF04286 Protein of unknown function (DUF445) HQJ03_004465 PF06133 Control of competence regulator ComK, YlbF/YmcA HQJ03_004480 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HQJ03_004480 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HQJ03_004480 PF00205 Thiamine pyrophosphate enzyme, central domain HQJ03_004485 PF03306 Alpha-acetolactate decarboxylase HQJ03_004490 PF02245 Methylpurine-DNA glycosylase (MPG) HQJ03_004500 PF17961 Bacterial Ig domain HQJ03_004500 PF00746 LPXTG cell wall anchor motif HQJ03_004500 PF17210 SdrD B-like domain HQJ03_004500 PF04650 YSIRK type signal peptide HQJ03_004500 PF10425 C-terminus of bacterial fibrinogen-binding adhesin HQJ03_004505 PF01471 Putative peptidoglycan binding domain HQJ03_004505 PF01510 N-acetylmuramoyl-L-alanine amidase HQJ03_004510 PF04055 Radical SAM superfamily HQJ03_004515 PF00501 AMP-binding enzyme HQJ03_004515 PF13193 AMP-binding enzyme C-terminal domain HQJ03_004530 PF01740 STAS domain HQJ03_004530 PF00916 Sulfate permease family HQJ03_004535 PF14667 Polysaccharide biosynthesis C-terminal domain HQJ03_004535 PF01943 Polysaccharide biosynthesis protein HQJ03_004555 PF00378 Enoyl-CoA hydratase/isomerase HQJ03_004575 PF05343 M42 glutamyl aminopeptidase HQJ03_004580 PF01520 N-acetylmuramoyl-L-alanine amidase HQJ03_004580 PF00395 S-layer homology domain HQJ03_004590 PF11121 Protein of unknown function (DUF2639) HQJ03_004595 PF05544 Proline racemase HQJ03_004600 PF02423 Ornithine cyclodeaminase/mu-crystallin family HQJ03_004605 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HQJ03_004610 PF00528 Binding-protein-dependent transport system inner membrane component HQJ03_004615 PF00528 Binding-protein-dependent transport system inner membrane component HQJ03_004615 PF12911 N-terminal TM domain of oligopeptide transport permease C HQJ03_004620 PF00005 ABC transporter HQJ03_004620 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HQJ03_004625 PF00005 ABC transporter HQJ03_004625 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HQJ03_004650 PF16123 Hydroxyacylglutathione hydrolase C-terminus HQJ03_004650 PF00753 Metallo-beta-lactamase superfamily HQJ03_004670 PF02423 Ornithine cyclodeaminase/mu-crystallin family HQJ03_004675 PF06013 Proteins of 100 residues with WXG HQJ03_004690 PF14436 Bacterial EndoU nuclease HQJ03_004690 PF04740 LXG domain of WXG superfamily HQJ03_004700 PF00083 Sugar (and other) transporter HQJ03_004720 PF08279 HTH domain HQJ03_004720 PF00072 Response regulator receiver domain HQJ03_004720 PF12431 Transcriptional regulator HQJ03_004725 PF03401 Tripartite tricarboxylate transporter family receptor HQJ03_004730 PF00293 NUDIX domain HQJ03_004735 PF00270 DEAD/DEAH box helicase HQJ03_004735 PF00271 Helicase conserved C-terminal domain HQJ03_004745 PF00772 DnaB-like helicase N terminal domain HQJ03_004745 PF03796 DnaB-like helicase C terminal domain HQJ03_004760 PF01925 Sulfite exporter TauE/SafE HQJ03_004775 PF07690 Major Facilitator Superfamily HQJ03_004790 PF09680 Family of unknown function HQJ03_004795 PF13302 Acetyltransferase (GNAT) domain HQJ03_004820 PF13026 Protein of unknown function (DUF3887) HQJ03_004820 PF12146 Serine aminopeptidase, S33 HQJ03_004860 PF01066 CDP-alcohol phosphatidyltransferase HQJ03_004875 PF02733 Dak1 domain HQJ03_004885 PF02733 Dak1 domain HQJ03_004920 PF01476 LysM domain HQJ03_004920 PF06725 3D domain HQJ03_004925 PF01476 LysM domain HQJ03_004925 PF00877 NlpC/P60 family HQJ03_004930 PF00395 S-layer homology domain HQJ03_004950 PF12697 Alpha/beta hydrolase family HQJ03_004990 PF11181 Heat induced stress protein YflT HQJ03_004995 PF05532 CsbD-like HQJ03_005010 PF01740 STAS domain HQJ03_005015 PF13581 Histidine kinase-like ATPase domain HQJ03_005020 PF04542 Sigma-70 region 2 HQJ03_005020 PF04539 Sigma-70 region 3 HQJ03_005020 PF04545 Sigma-70, region 4 HQJ03_005030 PF13426 PAS domain HQJ03_005030 PF07228 Stage II sporulation protein E (SpoIIE) HQJ03_005035 PF01739 CheR methyltransferase, SAM binding domain HQJ03_005035 PF03705 CheR methyltransferase, all-alpha domain HQJ03_005040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQJ03_005040 PF00512 His Kinase A (phospho-acceptor) domain HQJ03_005040 PF01627 Hpt domain HQJ03_005040 PF00072 Response regulator receiver domain HQJ03_005040 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) HQJ03_005040 PF00672 HAMP domain HQJ03_005065 PF01906 Putative heavy-metal-binding HQJ03_005080 PF08240 Alcohol dehydrogenase GroES-like domain HQJ03_005080 PF00107 Zinc-binding dehydrogenase HQJ03_005085 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family HQJ03_005090 PF11121 Protein of unknown function (DUF2639) HQJ03_005105 PF00149 Calcineurin-like phosphoesterase HQJ03_005110 PF13514 AAA domain HQJ03_005115 PF01336 OB-fold nucleic acid binding domain HQJ03_005115 PF01966 HD domain HQJ03_005120 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HQJ03_005125 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HQJ03_005130 PF18801 response regulator aspartate phosphatase H, N terminal HQJ03_005130 PF17874 MalT-like TPR region HQJ03_005140 PF08386 TAP-like protein HQJ03_005140 PF00561 alpha/beta hydrolase fold HQJ03_005145 PF14147 Sporulation protein YhaL HQJ03_005165 PF00190 Cupin HQJ03_005175 PF04309 Glycerol-3-phosphate responsive antiterminator HQJ03_005180 PF00230 Major intrinsic protein HQJ03_005185 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HQJ03_005185 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HQJ03_005190 PF01266 FAD dependent oxidoreductase HQJ03_005190 PF16901 C-terminal domain of alpha-glycerophosphate oxidase HQJ03_005195 PF03551 Transcriptional regulator PadR-like family HQJ03_005215 PF13538 UvrD-like helicase C-terminal domain HQJ03_005240 PF01047 MarR family HQJ03_005245 PF12732 YtxH-like protein HQJ03_005250 PF01230 HIT domain HQJ03_005255 PF00005 ABC transporter HQJ03_005260 PF05975 Bacterial ABC transporter protein EcsB HQJ03_005265 PF12787 EcsC protein family HQJ03_005285 PF03703 Bacterial PH domain HQJ03_005290 PF03703 Bacterial PH domain HQJ03_005315 PF10014 2OG-Fe dioxygenase HQJ03_005325 PF00892 EamA-like transporter family HQJ03_005330 PF03703 Bacterial PH domain HQJ03_005335 PF03703 Bacterial PH domain HQJ03_005340 PF03992 Antibiotic biosynthesis monooxygenase HQJ03_005345 PF00912 Transglycosylase HQJ03_005345 PF00905 Penicillin binding protein transpeptidase domain HQJ03_005350 PF01208 Uroporphyrinogen decarboxylase (URO-D) HQJ03_005355 PF00762 Ferrochelatase HQJ03_005360 PF01593 Flavin containing amine oxidoreductase HQJ03_005385 PF03965 Penicillinase repressor HQJ03_005395 PF17932 Tetracyclin repressor-like, C-terminal domain HQJ03_005395 PF00440 Bacterial regulatory proteins, tetR family HQJ03_005420 PF13302 Acetyltransferase (GNAT) domain HQJ03_005425 PF00356 Bacterial regulatory proteins, lacI family HQJ03_005430 PF14149 YhfH-like protein HQJ03_005435 PF12706 Beta-lactamase superfamily domain HQJ03_005440 PF10437 Bacterial lipoate protein ligase C-terminus HQJ03_005440 PF03099 Biotin/lipoate A/B protein ligase family HQJ03_005450 PF13193 AMP-binding enzyme C-terminal domain HQJ03_005450 PF00501 AMP-binding enzyme HQJ03_005455 PF01520 N-acetylmuramoyl-L-alanine amidase HQJ03_005455 PF00395 S-layer homology domain HQJ03_005465 PF00528 Binding-protein-dependent transport system inner membrane component HQJ03_005470 PF00528 Binding-protein-dependent transport system inner membrane component HQJ03_005475 PF00005 ABC transporter HQJ03_005475 PF17850 CysA C-terminal regulatory domain HQJ03_005475 PF12857 TOBE-like domain HQJ03_005585 PF07968 Leukocidin/Hemolysin toxin family HQJ03_005595 PF12146 Serine aminopeptidase, S33 HQJ03_005600 PF00149 Calcineurin-like phosphoesterase HQJ03_005605 PF01966 HD domain HQJ03_005610 PF13791 Sigma factor regulator C-terminal HQJ03_005610 PF13800 Sigma factor regulator N-terminal HQJ03_005615 PF04542 Sigma-70 region 2 HQJ03_005615 PF08281 Sigma-70, region 4 HQJ03_005620 PF06445 GyrI-like small molecule binding domain HQJ03_005620 PF12833 Helix-turn-helix domain HQJ03_005630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQJ03_005630 PF00512 His Kinase A (phospho-acceptor) domain HQJ03_005635 PF00072 Response regulator receiver domain HQJ03_005635 PF00486 Transcriptional regulatory protein, C terminal HQJ03_005655 PF16491 CAAX prenyl protease N-terminal, five membrane helices HQJ03_005655 PF01435 Peptidase family M48 HQJ03_005660 PF00672 HAMP domain HQJ03_005660 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HQJ03_005660 PF02743 Cache domain HQJ03_005665 PF00395 S-layer homology domain HQJ03_005665 PF00331 Glycosyl hydrolase family 10 HQJ03_005665 PF06452 Carbohydrate family 9 binding domain-like HQJ03_005665 PF02018 Carbohydrate binding domain HQJ03_005675 PF01274 Malate synthase HQJ03_005680 PF00463 Isocitrate lyase family HQJ03_005700 PF00313 'Cold-shock' DNA-binding domain HQJ03_005720 PF09335 SNARE associated Golgi protein HQJ03_005725 PF10502 Signal peptidase, peptidase S26 HQJ03_005730 PF13361 UvrD-like helicase C-terminal domain HQJ03_005730 PF12705 PD-(D/E)XK nuclease superfamily HQJ03_005735 PF00580 UvrD/REP helicase N-terminal domain HQJ03_005735 PF13361 UvrD-like helicase C-terminal domain HQJ03_005735 PF12705 PD-(D/E)XK nuclease superfamily HQJ03_005745 PF10676 Spore germination protein gerPA/gerPF HQJ03_005750 PF10970 Spore germination protein GerPE HQJ03_005760 PF10737 Spore germination protein GerPC HQJ03_005765 PF10803 Spore germination GerPB HQJ03_005770 PF10676 Spore germination protein gerPA/gerPF HQJ03_005775 PF09388 Spo0E like sporulation regulatory protein HQJ03_005780 PF01557 Fumarylacetoacetate (FAA) hydrolase family HQJ03_005790 PF00202 Aminotransferase class-III HQJ03_005795 PF07457 Protein of unknown function (DUF1516) HQJ03_005805 PF00733 Asparagine synthase HQJ03_005805 PF13537 Glutamine amidotransferase domain HQJ03_005810 PF00762 Ferrochelatase HQJ03_005815 PF00199 Catalase HQJ03_005815 PF06628 Catalase-related immune-responsive HQJ03_005820 PF00909 Ammonium Transporter Family HQJ03_005825 PF00128 Alpha amylase, catalytic domain HQJ03_005835 PF04461 Protein of unknown function (DUF520) HQJ03_005840 PF17783 CvfB-like winged helix domain HQJ03_005840 PF13509 S1 domain HQJ03_005865 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 HQJ03_005865 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) HQJ03_005870 PF12758 Protein of unknown function (DUF3813) HQJ03_005885 PF14168 YjzC-like protein HQJ03_005890 PF00004 ATPase family associated with various cellular activities (AAA) HQJ03_005890 PF07724 AAA domain (Cdc48 subfamily) HQJ03_005890 PF17871 AAA lid domain HQJ03_005890 PF02861 Clp amino terminal domain, pathogenicity island component HQJ03_005890 PF10431 C-terminal, D2-small domain, of ClpB protein HQJ03_005910 PF10815 ComZ HQJ03_005915 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III HQJ03_005915 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal HQJ03_005920 PF00109 Beta-ketoacyl synthase, N-terminal domain HQJ03_005920 PF02801 Beta-ketoacyl synthase, C-terminal domain HQJ03_005925 PF10026 Predicted Zn-dependent protease (DUF2268) HQJ03_005930 PF12227 Protein of unknown function (DUF3603) HQJ03_005940 PF00579 tRNA synthetases class I (W and Y) HQJ03_005950 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HQJ03_005955 PF00528 Binding-protein-dependent transport system inner membrane component HQJ03_005960 PF00528 Binding-protein-dependent transport system inner membrane component HQJ03_005960 PF12911 N-terminal TM domain of oligopeptide transport permease C HQJ03_005965 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HQJ03_005965 PF00005 ABC transporter HQJ03_005970 PF00005 ABC transporter HQJ03_005970 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HQJ03_005975 PF01554 MatE HQJ03_005980 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HQJ03_005990 PF03960 ArsC family HQJ03_005995 PF03741 Integral membrane protein TerC family HQJ03_006000 PF05389 Negative regulator of genetic competence (MecA) HQJ03_006005 PF13091 PLD-like domain HQJ03_006005 PF13396 Phospholipase_D-nuclease N-terminal HQJ03_006015 PF01432 Peptidase family M3 HQJ03_006015 PF08439 Oligopeptidase F HQJ03_006030 PF01152 Bacterial-like globin HQJ03_006035 PF01928 CYTH domain HQJ03_006045 PF04607 Region found in RelA / SpoT proteins HQJ03_006050 PF01513 ATP-NAD kinase HQJ03_006055 PF00849 RNA pseudouridylate synthase HQJ03_006065 PF00149 Calcineurin-like phosphoesterase HQJ03_006070 PF01098 Cell cycle protein HQJ03_006075 PF00535 Glycosyl transferase family 2 HQJ03_006080 PF08241 Methyltransferase domain HQJ03_006085 PF05711 Macrocin-O-methyltransferase (TylF) HQJ03_006095 PF00535 Glycosyl transferase family 2 HQJ03_006095 PF13181 Tetratricopeptide repeat HQJ03_006115 PF00483 Nucleotidyl transferase HQJ03_006120 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase HQJ03_006125 PF16363 GDP-mannose 4,6 dehydratase HQJ03_006130 PF04321 RmlD substrate binding domain HQJ03_006150 PF07098 Protein of unknown function (DUF1360) HQJ03_006170 PF13361 UvrD-like helicase C-terminal domain HQJ03_006170 PF00580 UvrD/REP helicase N-terminal domain HQJ03_006175 PF13673 Acetyltransferase (GNAT) domain HQJ03_006185 PF00756 Putative esterase HQJ03_006200 PF02368 Bacterial Ig-like domain (group 2) HQJ03_006205 PF00474 Sodium:solute symporter family HQJ03_006210 PF00425 chorismate binding enzyme HQJ03_006210 PF04715 Anthranilate synthase component I, N terminal region HQJ03_006215 PF00117 Glutamine amidotransferase class-I HQJ03_006215 PF02885 Glycosyl transferase family, helical bundle domain HQJ03_006215 PF00591 Glycosyl transferase family, a/b domain HQJ03_006220 PF02885 Glycosyl transferase family, helical bundle domain HQJ03_006220 PF00591 Glycosyl transferase family, a/b domain HQJ03_006225 PF00218 Indole-3-glycerol phosphate synthase HQJ03_006230 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase HQJ03_006235 PF00291 Pyridoxal-phosphate dependent enzyme HQJ03_006240 PF00290 Tryptophan synthase alpha chain HQJ03_006250 PF02652 L-lactate permease HQJ03_006255 PF10042 Uncharacterized conserved protein (DUF2278) HQJ03_006280 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HQJ03_006280 PF07992 Pyridine nucleotide-disulphide oxidoreductase HQJ03_006295 PF08241 Methyltransferase domain HQJ03_006300 PF00881 Nitroreductase family HQJ03_006315 PF02817 e3 binding domain HQJ03_006315 PF00364 Biotin-requiring enzyme HQJ03_006315 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HQJ03_006320 PF16870 2-oxoglutarate dehydrogenase C-terminal HQJ03_006320 PF00676 Dehydrogenase E1 component HQJ03_006320 PF02779 Transketolase, pyrimidine binding domain HQJ03_006375 PF07943 Penicillin-binding protein 5, C-terminal domain HQJ03_006375 PF00768 D-alanyl-D-alanine carboxypeptidase HQJ03_006385 PF12389 Camelysin metallo-endopeptidase HQJ03_006395 PF12389 Camelysin metallo-endopeptidase HQJ03_006400 PF01381 Helix-turn-helix HQJ03_006400 PF08671 Anti-repressor SinI HQJ03_006410 PF05547 Immune inhibitor A peptidase M6 HQJ03_006415 PF00171 Aldehyde dehydrogenase family HQJ03_006420 PF08402 TOBE domain HQJ03_006420 PF00005 ABC transporter HQJ03_006425 PF00528 Binding-protein-dependent transport system inner membrane component HQJ03_006430 PF00528 Binding-protein-dependent transport system inner membrane component HQJ03_006435 PF13416 Bacterial extracellular solute-binding protein HQJ03_006440 PF01569 PAP2 superfamily HQJ03_006445 PF03176 MMPL family HQJ03_006455 PF01479 S4 domain HQJ03_006455 PF00849 RNA pseudouridylate synthase HQJ03_006465 PF00188 Cysteine-rich secretory protein family HQJ03_006470 PF13183 4Fe-4S dicluster domain HQJ03_006470 PF02754 Cysteine-rich domain HQJ03_006475 PF01565 FAD binding domain HQJ03_006475 PF02913 FAD linked oxidases, C-terminal domain HQJ03_006480 PF17853 GGDEF-like domain HQJ03_006480 PF05651 Putative sugar diacid recognition HQJ03_006480 PF13556 PucR C-terminal helix-turn-helix domain HQJ03_006490 PF00486 Transcriptional regulatory protein, C terminal HQJ03_006490 PF00072 Response regulator receiver domain HQJ03_006495 PF00672 HAMP domain HQJ03_006495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQJ03_006495 PF18698 Histidine kinase sensor domain HQJ03_006495 PF00512 His Kinase A (phospho-acceptor) domain HQJ03_006495 PF00989 PAS fold HQJ03_006500 PF07729 FCD domain HQJ03_006500 PF00392 Bacterial regulatory proteins, gntR family HQJ03_006505 PF02754 Cysteine-rich domain HQJ03_006510 PF11870 Domain of unknown function (DUF3390) HQJ03_006510 PF13183 4Fe-4S dicluster domain HQJ03_006510 PF02589 LUD domain HQJ03_006515 PF02589 LUD domain HQJ03_006520 PF06750 Bacterial Peptidase A24 N-terminal domain HQJ03_006520 PF01478 Type IV leader peptidase family HQJ03_006530 PF01226 Formate/nitrite transporter HQJ03_006535 PF03741 Integral membrane protein TerC family HQJ03_006540 PF02386 Cation transport protein HQJ03_006545 PF00269 Small, acid-soluble spore proteins, alpha/beta type HQJ03_006550 PF01575 MaoC like domain HQJ03_006575 PF00561 alpha/beta hydrolase fold HQJ03_006585 PF02386 Cation transport protein HQJ03_006605 PF00005 ABC transporter HQJ03_006605 PF08402 TOBE domain HQJ03_006610 PF00528 Binding-protein-dependent transport system inner membrane component HQJ03_006615 PF13419 Haloacid dehalogenase-like hydrolase HQJ03_006620 PF00266 Aminotransferase class-V HQJ03_006630 PF08220 DeoR-like helix-turn-helix domain HQJ03_006630 PF00455 DeoR C terminal sensor domain HQJ03_006640 PF00596 Class II Aldolase and Adducin N-terminal domain HQJ03_006650 PF04748 Divergent polysaccharide deacetylase HQJ03_006655 PF09388 Spo0E like sporulation regulatory protein HQJ03_006660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQJ03_006660 PF02743 Cache domain HQJ03_006660 PF00512 His Kinase A (phospho-acceptor) domain HQJ03_006665 PF01047 MarR family HQJ03_006675 PF12867 DinB superfamily HQJ03_006685 PF13426 PAS domain HQJ03_006685 PF13188 PAS domain HQJ03_006685 PF00989 PAS fold HQJ03_006685 PF00512 His Kinase A (phospho-acceptor) domain HQJ03_006685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQJ03_006690 PF06508 Queuosine biosynthesis protein QueC HQJ03_006695 PF01242 6-pyruvoyl tetrahydropterin synthase HQJ03_006700 PF04055 Radical SAM superfamily HQJ03_006705 PF14489 QueF-like protein HQJ03_006710 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) HQJ03_006740 PF07972 NrdI Flavodoxin like HQJ03_006745 PF00317 Ribonucleotide reductase, all-alpha domain HQJ03_006745 PF02867 Ribonucleotide reductase, barrel domain HQJ03_006745 PF08343 Ribonucleotide reductase N-terminal HQJ03_006750 PF00268 Ribonucleotide reductase, small chain HQJ03_006755 PF00392 Bacterial regulatory proteins, gntR family HQJ03_006760 PF00005 ABC transporter HQJ03_006770 PF00005 ABC transporter HQJ03_006790 PF01037 Lrp/AsnC ligand binding domain HQJ03_006800 PF00857 Isochorismatase family HQJ03_006810 PF02016 LD-carboxypeptidase N-terminal domain HQJ03_006810 PF17676 LD-carboxypeptidase C-terminal domain HQJ03_006815 PF03060 Nitronate monooxygenase HQJ03_006820 PF04914 DltD protein HQJ03_006825 PF00550 Phosphopantetheine attachment site HQJ03_006830 PF03062 MBOAT, membrane-bound O-acyltransferase family HQJ03_006835 PF00501 AMP-binding enzyme HQJ03_006835 PF13193 AMP-binding enzyme C-terminal domain HQJ03_006845 PF07687 Peptidase dimerisation domain HQJ03_006845 PF01546 Peptidase family M20/M25/M40 HQJ03_006855 PF00258 Flavodoxin HQJ03_006870 PF01636 Phosphotransferase enzyme family HQJ03_006890 PF01554 MatE HQJ03_006895 PF02673 Bacitracin resistance protein BacA HQJ03_006910 PF01047 MarR family HQJ03_006920 PF00375 Sodium:dicarboxylate symporter family HQJ03_006925 PF02386 Cation transport protein HQJ03_006935 PF09579 Sporulation protein YtfJ (Spore_YtfJ) HQJ03_006945 PF03698 Uncharacterised protein family (UPF0180) HQJ03_006955 PF01063 Amino-transferase class IV HQJ03_006960 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HQJ03_006960 PF00205 Thiamine pyrophosphate enzyme, central domain HQJ03_006960 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HQJ03_006965 PF10369 Small subunit of acetolactate synthase HQJ03_006965 PF01842 ACT domain HQJ03_006970 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain HQJ03_006970 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain HQJ03_006975 PF00682 HMGL-like HQJ03_006975 PF08502 LeuA allosteric (dimerisation) domain HQJ03_006980 PF00180 Isocitrate/isopropylmalate dehydrogenase HQJ03_006985 PF00330 Aconitase family (aconitate hydratase) HQJ03_006990 PF00694 Aconitase C-terminal domain HQJ03_006995 PF13393 Histidyl-tRNA synthetase HQJ03_007000 PF01634 ATP phosphoribosyltransferase HQJ03_007005 PF00815 Histidinol dehydrogenase HQJ03_007010 PF00475 Imidazoleglycerol-phosphate dehydratase HQJ03_007015 PF00117 Glutamine amidotransferase class-I HQJ03_007020 PF00977 Histidine biosynthesis protein HQJ03_007025 PF00977 Histidine biosynthesis protein HQJ03_007030 PF01502 Phosphoribosyl-AMP cyclohydrolase HQJ03_007035 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase HQJ03_007040 PF02811 PHP domain HQJ03_007050 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HQJ03_007050 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HQJ03_007055 PF01066 CDP-alcohol phosphatidyltransferase HQJ03_007060 PF00884 Sulfatase HQJ03_007070 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain HQJ03_007070 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain HQJ03_007080 PF01507 Phosphoadenosine phosphosulfate reductase family HQJ03_007085 PF14306 PUA-like domain HQJ03_007085 PF01747 ATP-sulfurylase HQJ03_007095 PF01077 Nitrite and sulphite reductase 4Fe-4S domain HQJ03_007095 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain HQJ03_007105 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HQJ03_007110 PF01903 CbiX HQJ03_007120 PF00209 Sodium:neurotransmitter symporter family HQJ03_007135 PF00375 Sodium:dicarboxylate symporter family HQJ03_007145 PF03553 Na+/H+ antiporter family HQJ03_007160 PF09922 Cell wall-active antibiotics response 4TMS YvqF HQJ03_007165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQJ03_007165 PF00672 HAMP domain HQJ03_007165 PF07730 Histidine kinase HQJ03_007170 PF00072 Response regulator receiver domain HQJ03_007170 PF00196 Bacterial regulatory proteins, luxR family HQJ03_007180 PF05525 Branched-chain amino acid transport protein HQJ03_007190 PF01209 ubiE/COQ5 methyltransferase family HQJ03_007215 PF00042 Globin HQJ03_007215 PF00970 Oxidoreductase FAD-binding domain HQJ03_007215 PF00175 Oxidoreductase NAD-binding domain HQJ03_007230 PF01925 Sulfite exporter TauE/SafE HQJ03_007235 PF01384 Phosphate transporter family HQJ03_007240 PF01865 Protein of unknown function DUF47 HQJ03_007245 PF00905 Penicillin binding protein transpeptidase domain HQJ03_007245 PF00912 Transglycosylase HQJ03_007260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQJ03_007260 PF00512 His Kinase A (phospho-acceptor) domain HQJ03_007260 PF00989 PAS fold HQJ03_007265 PF01904 Protein of unknown function DUF72 HQJ03_007275 PF00589 Phage integrase family HQJ03_007280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQJ03_007280 PF00512 His Kinase A (phospho-acceptor) domain HQJ03_007280 PF00989 PAS fold HQJ03_007280 PF16736 Single Cache-like HQJ03_007285 PF01048 Phosphorylase superfamily HQJ03_007295 PF03706 Lysylphosphatidylglycerol synthase TM region HQJ03_007295 PF09924 Uncharacterised conserved protein (DUF2156) HQJ03_007310 PF02777 Iron/manganese superoxide dismutases, C-terminal domain HQJ03_007310 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain HQJ03_007315 PF07943 Penicillin-binding protein 5, C-terminal domain HQJ03_007315 PF00768 D-alanyl-D-alanine carboxypeptidase HQJ03_007320 PF07670 Nucleoside recognition HQJ03_007325 PF07670 Nucleoside recognition HQJ03_007330 PF00849 RNA pseudouridylate synthase HQJ03_007330 PF01479 S4 domain HQJ03_007335 PF00578 AhpC/TSA family HQJ03_007340 PF05140 ResB-like family HQJ03_007345 PF01578 Cytochrome C assembly protein HQJ03_007350 PF00486 Transcriptional regulatory protein, C terminal HQJ03_007350 PF00072 Response regulator receiver domain HQJ03_007355 PF00989 PAS fold HQJ03_007355 PF00512 His Kinase A (phospho-acceptor) domain HQJ03_007355 PF18698 Histidine kinase sensor domain HQJ03_007355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQJ03_007355 PF00672 HAMP domain HQJ03_007360 PF01923 Cobalamin adenosyltransferase HQJ03_007375 PF12822 ECF transporter, substrate-specific component HQJ03_007390 PF00270 DEAD/DEAH box helicase HQJ03_007390 PF00271 Helicase conserved C-terminal domain HQJ03_007395 PF02517 CPBP intramembrane metalloprotease HQJ03_007405 PF00149 Calcineurin-like phosphoesterase HQJ03_007410 PF13411 MerR HTH family regulatory protein HQJ03_007415 PF05389 Negative regulator of genetic competence (MecA) HQJ03_007420 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain HQJ03_007420 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase HQJ03_007445 PF00710 Asparaginase, N-terminal HQJ03_007445 PF17763 Glutaminase/Asparaginase C-terminal domain HQJ03_007455 PF02224 Cytidylate kinase HQJ03_007460 PF00575 S1 RNA binding domain HQJ03_007465 PF01070 FMN-dependent dehydrogenase HQJ03_007470 PF14140 YpzI-like protein HQJ03_007480 PF14045 YIEGIA protein HQJ03_007490 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal HQJ03_007490 PF01926 50S ribosome-binding GTPase HQJ03_007495 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus HQJ03_007495 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus HQJ03_007505 PF10966 Protein of unknown function (DUF2768) HQJ03_007515 PF09547 Stage IV sporulation protein A (spore_IV_A) HQJ03_007520 PF00216 Bacterial DNA-binding protein HQJ03_007525 PF01227 GTP cyclohydrolase I HQJ03_007530 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 HQJ03_007535 PF01209 ubiE/COQ5 methyltransferase family HQJ03_007540 PF00348 Polyprenyl synthetase HQJ03_007545 PF00334 Nucleoside diphosphate kinase HQJ03_007550 PF01264 Chorismate synthase HQJ03_007555 PF01761 3-dehydroquinate synthase HQJ03_007560 PF00155 Aminotransferase class I and II HQJ03_007570 PF08864 UPF0302 domain HQJ03_007570 PF08858 IDEAL domain HQJ03_007575 PF10673 Protein of unknown function (DUF2487) HQJ03_007580 PF00355 Rieske [2Fe-2S] domain HQJ03_007585 PF00033 Cytochrome b/b6/petB HQJ03_007590 PF00032 Cytochrome b(C-terminal)/b6/petD HQJ03_007590 PF13442 Cytochrome C oxidase, cbb3-type, subunit III HQJ03_007595 PF07187 Protein of unknown function (DUF1405) HQJ03_007605 PF09577 Sporulation protein YpjB (SpoYpjB) HQJ03_007610 PF04298 Putative neutral zinc metallopeptidase HQJ03_007620 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 HQJ03_007620 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) HQJ03_007625 PF03819 MazG nucleotide pyrophosphohydrolase domain HQJ03_007630 PF01113 Dihydrodipicolinate reductase, N-terminus HQJ03_007630 PF05173 Dihydrodipicolinate reductase, C-terminus HQJ03_007635 PF02142 MGS-like domain HQJ03_007640 PF02585 GlcNAc-PI de-N-acetylase HQJ03_007645 PF00534 Glycosyl transferases group 1 HQJ03_007645 PF13439 Glycosyltransferase Family 4 HQJ03_007650 PF13735 tRNA nucleotidyltransferase domain 2 putative HQJ03_007650 PF12627 Probable RNA and SrmB- binding site of polymerase A HQJ03_007650 PF01743 Poly A polymerase head domain HQJ03_007655 PF08279 HTH domain HQJ03_007655 PF03099 Biotin/lipoate A/B protein ligase family HQJ03_007655 PF02237 Biotin protein ligase C terminal domain HQJ03_007665 PF02548 Ketopantoate hydroxymethyltransferase HQJ03_007670 PF02569 Pantoate-beta-alanine ligase HQJ03_007675 PF02261 Aspartate decarboxylase HQJ03_007680 PF13307 Helicase C-terminal domain HQJ03_007680 PF04851 Type III restriction enzyme, res subunit HQJ03_007680 PF00929 Exonuclease HQJ03_007685 PF14084 Protein of unknown function (DUF4264) HQJ03_007695 PF00155 Aminotransferase class I and II HQJ03_007700 PF07261 Replication initiation and membrane attachment HQJ03_007705 PF10576 Iron-sulfur binding domain of endonuclease III HQJ03_007705 PF00633 Helix-hairpin-helix motif HQJ03_007705 PF00730 HhH-GPD superfamily base excision DNA repair protein HQJ03_007715 PF00912 Transglycosylase HQJ03_007715 PF00905 Penicillin binding protein transpeptidase domain HQJ03_007720 PF03838 Recombination protein U HQJ03_007725 PF10720 Protein of unknown function (DUF2515) HQJ03_007755 PF06908 YspA SLOG family HQJ03_007760 PF05103 DivIVA protein HQJ03_007770 PF01170 Putative RNA methylase family UPF0020 HQJ03_007770 PF02926 THUMP domain HQJ03_007780 PF13307 Helicase C-terminal domain HQJ03_007785 PF02074 Carboxypeptidase Taq (M32) metallopeptidase HQJ03_007795 PF00557 Metallopeptidase family M24 HQJ03_007800 PF00156 Phosphoribosyl transferase domain HQJ03_007805 PF00860 Permease family HQJ03_007810 PF04235 Protein of unknown function (DUF418) HQJ03_007820 PF00350 Dynamin family HQJ03_007830 PF00583 Acetyltransferase (GNAT) family HQJ03_007835 PF10752 Protein of unknown function (DUF2533) HQJ03_007840 PF00581 Rhodanese-like domain HQJ03_007875 PF00690 Cation transporter/ATPase, N-terminus HQJ03_007875 PF00689 Cation transporting ATPase, C-terminus HQJ03_007880 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain HQJ03_007880 PF01367 5'-3' exonuclease, C-terminal SAM fold HQJ03_007895 PF13807 G-rich domain on putative tyrosine kinase HQJ03_007895 PF02706 Chain length determinant protein HQJ03_007905 PF02397 Bacterial sugar transferase HQJ03_007920 PF00535 Glycosyl transferase family 2 HQJ03_007925 PF13439 Glycosyltransferase Family 4 HQJ03_007925 PF00534 Glycosyl transferases group 1 HQJ03_007940 PF18014 Acetyltransferase (GNAT) domain HQJ03_007940 PF13673 Acetyltransferase (GNAT) domain HQJ03_007960 PF13456 Reverse transcriptase-like HQJ03_007965 PF01263 Aldose 1-epimerase HQJ03_007990 PF00313 'Cold-shock' DNA-binding domain HQJ03_007995 PF08892 YqcI/YcgG family HQJ03_008000 PF01810 LysE type translocator HQJ03_008020 PF00474 Sodium:solute symporter family HQJ03_008025 PF00202 Aminotransferase class-III HQJ03_008035 PF00999 Sodium/hydrogen exchanger family HQJ03_008040 PF17770 Ribonuclease J C-terminal domain HQJ03_008040 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain HQJ03_008040 PF00753 Metallo-beta-lactamase superfamily HQJ03_008045 PF06445 GyrI-like small molecule binding domain HQJ03_008045 PF13411 MerR HTH family regulatory protein HQJ03_008055 PF04239 Protein of unknown function (DUF421) HQJ03_008060 PF02698 DUF218 domain HQJ03_008070 PF00881 Nitroreductase family HQJ03_008095 PF17209 Hfq protein HQJ03_008105 PF01618 MotA/TolQ/ExbB proton channel family HQJ03_008110 PF00691 OmpA family HQJ03_008110 PF13677 Membrane MotB of proton-channel complex MotA/MotB HQJ03_008115 PF00072 Response regulator receiver domain HQJ03_008120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQJ03_008120 PF02895 Signal transducing histidine kinase, homodimeric domain HQJ03_008120 PF01627 Hpt domain HQJ03_008120 PF01584 CheW-like domain HQJ03_008120 PF07194 P2 response regulator binding domain HQJ03_008125 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term HQJ03_008125 PF04509 CheC-like family HQJ03_008140 PF03705 CheR methyltransferase, all-alpha domain HQJ03_008140 PF01739 CheR methyltransferase, SAM binding domain HQJ03_008160 PF00460 Flagella basal body rod protein HQJ03_008160 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HQJ03_008165 PF00700 Bacterial flagellin C-terminal helical region HQJ03_008165 PF00669 Bacterial flagellin N-terminal helical region HQJ03_008185 PF00460 Flagella basal body rod protein HQJ03_008190 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HQJ03_008190 PF00460 Flagella basal body rod protein HQJ03_008195 PF02049 Flagellar hook-basal body complex protein FliE HQJ03_008200 PF08345 Flagellar M-ring protein C-terminal HQJ03_008200 PF01514 Secretory protein of YscJ/FliF family HQJ03_008205 PF14842 FliG N-terminal domain HQJ03_008205 PF01706 FliG C-terminal domain HQJ03_008205 PF14841 FliG middle domain HQJ03_008215 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HQJ03_008215 PF02874 ATP synthase alpha/beta family, beta-barrel domain HQJ03_008215 PF18269 T3SS EscN ATPase C-terminal domain HQJ03_008235 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HQJ03_008235 PF07559 Flagellar basal body protein FlaE HQJ03_008235 PF00460 Flagella basal body rod protein HQJ03_008250 PF00072 Response regulator receiver domain HQJ03_008250 PF01584 CheW-like domain HQJ03_008255 PF12181 DNA binding domain of the motility gene repressor (MogR) HQJ03_008260 PF00700 Bacterial flagellin C-terminal helical region HQJ03_008260 PF00669 Bacterial flagellin N-terminal helical region HQJ03_008265 PF00700 Bacterial flagellin C-terminal helical region HQJ03_008265 PF00669 Bacterial flagellin N-terminal helical region HQJ03_008270 PF01464 Transglycosylase SLT domain HQJ03_008280 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term HQJ03_008280 PF02154 Flagellar motor switch protein FliM HQJ03_008285 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term HQJ03_008285 PF04509 CheC-like family HQJ03_008295 PF00813 FliP family HQJ03_008300 PF01313 Bacterial export proteins, family 3 HQJ03_008310 PF01312 FlhB HrpN YscU SpaS Family HQJ03_008315 PF00771 FHIPEP family HQJ03_008320 PF00448 SRP54-type protein, GTPase domain HQJ03_008325 PF00460 Flagella basal body rod protein HQJ03_008325 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HQJ03_008330 PF02272 DHHA1 domain HQJ03_008330 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HQJ03_008330 PF01411 tRNA synthetases class II (A) HQJ03_008365 PF03992 Antibiotic biosynthesis monooxygenase HQJ03_008370 PF08141 Small acid-soluble spore protein H family HQJ03_008390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HQJ03_008390 PF03466 LysR substrate binding domain HQJ03_008395 PF00005 ABC transporter HQJ03_008395 PF08402 TOBE domain HQJ03_008405 PF00528 Binding-protein-dependent transport system inner membrane component HQJ03_008410 PF00753 Metallo-beta-lactamase superfamily HQJ03_008410 PF12706 Beta-lactamase superfamily domain HQJ03_008420 PF10787 Uncharacterised protein from bacillus cereus group HQJ03_008440 PF00300 Histidine phosphatase superfamily (branch 1) HQJ03_008450 PF00561 alpha/beta hydrolase fold HQJ03_008460 PF01047 MarR family HQJ03_008470 PF13537 Glutamine amidotransferase domain HQJ03_008470 PF00733 Asparagine synthase HQJ03_008490 PF16916 Dimerisation domain of Zinc Transporter HQJ03_008490 PF01545 Cation efflux family HQJ03_008500 PF07729 FCD domain HQJ03_008500 PF00392 Bacterial regulatory proteins, gntR family HQJ03_008505 PF00892 EamA-like transporter family HQJ03_008515 PF07683 Cobalamin synthesis protein cobW C-terminal domain HQJ03_008515 PF02492 CobW/HypB/UreG, nucleotide-binding domain HQJ03_008520 PF03773 Predicted permease HQJ03_008535 PF03553 Na+/H+ antiporter family HQJ03_008540 PF13411 MerR HTH family regulatory protein HQJ03_008550 PF10415 Fumarase C C-terminus HQJ03_008550 PF00206 Lyase HQJ03_008565 PF01554 MatE HQJ03_008570 PF03575 Peptidase family S51 HQJ03_008590 PF02683 Cytochrome C biogenesis protein transmembrane region HQJ03_008595 PF00578 AhpC/TSA family HQJ03_008610 PF18801 response regulator aspartate phosphatase H, N terminal HQJ03_008625 PF00291 Pyridoxal-phosphate dependent enzyme HQJ03_008630 PF04286 Protein of unknown function (DUF445) HQJ03_008655 PF00196 Bacterial regulatory proteins, luxR family HQJ03_008655 PF00072 Response regulator receiver domain HQJ03_008660 PF13185 GAF domain HQJ03_008660 PF13492 GAF domain HQJ03_008660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQJ03_008660 PF07730 Histidine kinase HQJ03_008665 PF00005 ABC transporter HQJ03_008680 PF13091 PLD-like domain HQJ03_008685 PF00696 Amino acid kinase family HQJ03_008690 PF00375 Sodium:dicarboxylate symporter family HQJ03_008695 PF10415 Fumarase C C-terminus HQJ03_008695 PF00206 Lyase HQJ03_008700 PF03949 Malic enzyme, NAD binding domain HQJ03_008700 PF00390 Malic enzyme, N-terminal domain HQJ03_008705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQJ03_008710 PF08664 YcbB domain HQJ03_008710 PF00072 Response regulator receiver domain HQJ03_008715 PF00176 SNF2 family N-terminal domain HQJ03_008715 PF04434 SWIM zinc finger HQJ03_008715 PF00271 Helicase conserved C-terminal domain HQJ03_008725 PF03590 Aspartate-ammonia ligase HQJ03_008735 PF00696 Amino acid kinase family HQJ03_008735 PF13840 ACT domain HQJ03_008750 PF14158 YndJ-like protein HQJ03_008755 PF09297 NADH pyrophosphatase zinc ribbon domain HQJ03_008755 PF00293 NUDIX domain HQJ03_008760 PF07690 Major Facilitator Superfamily HQJ03_008770 PF03976 Polyphosphate kinase 2 (PPK2) HQJ03_008775 PF10400 Virulence activator alpha C-term HQJ03_008775 PF03551 Transcriptional regulator PadR-like family HQJ03_008780 PF07690 Major Facilitator Superfamily HQJ03_008790 PF07690 Major Facilitator Superfamily HQJ03_008805 PF16360 GTP-binding GTPase Middle Region HQJ03_008805 PF01926 50S ribosome-binding GTPase HQJ03_008805 PF13167 GTP-binding GTPase N-terminal HQJ03_008810 PF07690 Major Facilitator Superfamily HQJ03_008815 PF00291 Pyridoxal-phosphate dependent enzyme HQJ03_008835 PF00209 Sodium:neurotransmitter symporter family HQJ03_008840 PF01522 Polysaccharide deacetylase HQJ03_008840 PF03422 Carbohydrate binding module (family 6) HQJ03_008840 PF00457 Glycosyl hydrolases family 11 HQJ03_008850 PF04239 Protein of unknown function (DUF421) HQJ03_008870 PF01625 Peptide methionine sulfoxide reductase HQJ03_008880 PF01063 Amino-transferase class IV HQJ03_008885 PF00205 Thiamine pyrophosphate enzyme, central domain HQJ03_008885 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HQJ03_008885 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HQJ03_008895 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain HQJ03_008895 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain HQJ03_008900 PF00920 Dehydratase family HQJ03_008905 PF00291 Pyridoxal-phosphate dependent enzyme HQJ03_008905 PF00585 C-terminal regulatory domain of Threonine dehydratase HQJ03_008915 PF09587 Bacterial capsule synthesis protein PGA_cap HQJ03_008930 PF07690 Major Facilitator Superfamily HQJ03_008935 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase HQJ03_008945 PF04397 LytTr DNA-binding domain HQJ03_008945 PF00072 Response regulator receiver domain HQJ03_008950 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain HQJ03_008950 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain HQJ03_008965 PF01979 Amidohydrolase family HQJ03_008970 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HQJ03_008975 PF13302 Acetyltransferase (GNAT) domain HQJ03_008980 PF01566 Natural resistance-associated macrophage protein HQJ03_008985 PF17773 UPF0176 acylphosphatase like domain HQJ03_008985 PF12368 Rhodanase C-terminal HQJ03_008985 PF00581 Rhodanese-like domain HQJ03_008995 PF08546 Ketopantoate reductase PanE/ApbA C terminal HQJ03_008995 PF02558 Ketopantoate reductase PanE/ApbA HQJ03_009000 PF13520 Amino acid permease HQJ03_009010 PF05791 Bacillus haemolytic enterotoxin (HBL) HQJ03_009015 PF05791 Bacillus haemolytic enterotoxin (HBL) HQJ03_009025 PF13088 BNR repeat-like domain HQJ03_009025 PF10633 NPCBM-associated, NEW3 domain of alpha-galactosidase HQJ03_009025 PF00754 F5/8 type C domain HQJ03_009030 PF02073 Thermophilic metalloprotease (M29) HQJ03_009045 PF00583 Acetyltransferase (GNAT) family HQJ03_009050 PF01906 Putative heavy-metal-binding HQJ03_009060 PF00440 Bacterial regulatory proteins, tetR family HQJ03_009065 PF04198 Putative sugar-binding domain HQJ03_009070 PF01791 DeoC/LacD family aldolase HQJ03_009075 PF01773 Na+ dependent nucleoside transporter N-terminus HQJ03_009075 PF07662 Na+ dependent nucleoside transporter C-terminus HQJ03_009080 PF02885 Glycosyl transferase family, helical bundle domain HQJ03_009080 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain HQJ03_009080 PF00591 Glycosyl transferase family, a/b domain HQJ03_009085 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HQJ03_009095 PF07301 Protein of unknown function (DUF1453) HQJ03_009100 PF05979 Bacterial protein of unknown function (DUF896) HQJ03_009105 PF05195 Aminopeptidase P, N-terminal domain HQJ03_009105 PF00557 Metallopeptidase family M24 HQJ03_009115 PF07732 Multicopper oxidase HQJ03_009115 PF00394 Multicopper oxidase HQJ03_009115 PF07731 Multicopper oxidase HQJ03_009125 PF13342 C-terminal repeat of topoisomerase HQJ03_009125 PF01751 Toprim domain HQJ03_009125 PF01131 DNA topoisomerase HQJ03_009125 PF01396 Topoisomerase DNA binding C4 zinc finger HQJ03_009140 PF02525 Flavodoxin-like fold HQJ03_009145 PF05525 Branched-chain amino acid transport protein HQJ03_009150 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HQJ03_009155 PF04234 CopC domain HQJ03_009155 PF05425 Copper resistance protein D HQJ03_009155 PF13115 YtkA-like HQJ03_009160 PF07987 Domain of unkown function (DUF1775) HQJ03_009165 PF00892 EamA-like transporter family HQJ03_009170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HQJ03_009170 PF03466 LysR substrate binding domain HQJ03_009175 PF02082 Transcriptional regulator HQJ03_009180 PF01323 DSBA-like thioredoxin domain HQJ03_009185 PF00881 Nitroreductase family HQJ03_009190 PF01425 Amidase HQJ03_009195 PF01594 AI-2E family transporter HQJ03_009200 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain HQJ03_009200 PF00056 lactate/malate dehydrogenase, NAD binding domain HQJ03_009205 PF01593 Flavin containing amine oxidoreductase HQJ03_009210 PF02492 CobW/HypB/UreG, nucleotide-binding domain HQJ03_009210 PF07683 Cobalamin synthesis protein cobW C-terminal domain HQJ03_009220 PF00005 ABC transporter HQJ03_009220 PF12399 Branched-chain amino acid ATP-binding cassette transporter HQJ03_009225 PF00005 ABC transporter HQJ03_009230 PF02653 Branched-chain amino acid transport system / permease component HQJ03_009240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HQJ03_009240 PF03466 LysR substrate binding domain HQJ03_009250 PF14552 Tautomerase enzyme HQJ03_009260 PF01047 MarR family HQJ03_009270 PF01654 Cytochrome bd terminal oxidase subunit I HQJ03_009275 PF02322 Cytochrome bd terminal oxidase subunit II HQJ03_009280 PF00664 ABC transporter transmembrane region HQJ03_009280 PF00005 ABC transporter HQJ03_009285 PF00664 ABC transporter transmembrane region HQJ03_009285 PF00005 ABC transporter HQJ03_009295 PF00535 Glycosyl transferase family 2 HQJ03_009300 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family HQJ03_009305 PF00132 Bacterial transferase hexapeptide (six repeats) HQJ03_009330 PF02016 LD-carboxypeptidase N-terminal domain HQJ03_009330 PF17676 LD-carboxypeptidase C-terminal domain HQJ03_009335 PF07943 Penicillin-binding protein 5, C-terminal domain HQJ03_009335 PF00768 D-alanyl-D-alanine carboxypeptidase HQJ03_009350 PF01476 LysM domain HQJ03_009350 PF00877 NlpC/P60 family HQJ03_009360 PF00005 ABC transporter HQJ03_009360 PF00664 ABC transporter transmembrane region HQJ03_009365 PF00072 Response regulator receiver domain HQJ03_009365 PF00486 Transcriptional regulatory protein, C terminal HQJ03_009370 PF00512 His Kinase A (phospho-acceptor) domain HQJ03_009370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQJ03_009370 PF16736 Single Cache-like HQJ03_009370 PF00989 PAS fold HQJ03_009380 PF00106 short chain dehydrogenase HQJ03_009385 PF04439 Streptomycin adenylyltransferase HQJ03_009390 PF01522 Polysaccharide deacetylase HQJ03_009410 PF01842 ACT domain HQJ03_009410 PF00742 Homoserine dehydrogenase HQJ03_009410 PF03447 Homoserine dehydrogenase, NAD binding domain HQJ03_009415 PF00291 Pyridoxal-phosphate dependent enzyme HQJ03_009420 PF00288 GHMP kinases N terminal domain HQJ03_009420 PF08544 GHMP kinases C terminal HQJ03_009435 PF03816 Cell envelope-related transcriptional attenuator domain HQJ03_009445 PF00486 Transcriptional regulatory protein, C terminal HQJ03_009445 PF00072 Response regulator receiver domain HQJ03_009450 PF16736 Single Cache-like HQJ03_009450 PF00989 PAS fold HQJ03_009450 PF00512 His Kinase A (phospho-acceptor) domain HQJ03_009450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQJ03_009455 PF01522 Polysaccharide deacetylase HQJ03_009465 PF02308 MgtC family HQJ03_009470 PF00583 Acetyltransferase (GNAT) family HQJ03_009475 PF06276 Ferric iron reductase FhuF-like transporter HQJ03_009475 PF04183 IucA / IucC family HQJ03_009480 PF06276 Ferric iron reductase FhuF-like transporter HQJ03_009480 PF04183 IucA / IucC family HQJ03_009485 PF00501 AMP-binding enzyme HQJ03_009485 PF13193 AMP-binding enzyme C-terminal domain HQJ03_009500 PF01261 Xylose isomerase-like TIM barrel HQJ03_009505 PF00269 Small, acid-soluble spore proteins, alpha/beta type HQJ03_009510 PF07690 Major Facilitator Superfamily HQJ03_009515 PF01810 LysE type translocator HQJ03_009520 PF00155 Aminotransferase class I and II HQJ03_009520 PF00392 Bacterial regulatory proteins, gntR family HQJ03_009530 PF01734 Patatin-like phospholipase HQJ03_009555 PF13344 Haloacid dehalogenase-like hydrolase HQJ03_009555 PF00293 NUDIX domain HQJ03_009560 PF02540 NAD synthase HQJ03_009565 PF02687 FtsX-like permease family HQJ03_009570 PF18277 AbrB C-terminal domain HQJ03_009570 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin HQJ03_009575 PF00082 Subtilase family HQJ03_009585 PF05656 Protein of unknown function (DUF805) HQJ03_009605 PF03193 RsgA GTPase HQJ03_009610 PF00672 HAMP domain HQJ03_009610 PF02743 Cache domain HQJ03_009610 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HQJ03_009630 PF00210 Ferritin-like domain HQJ03_009645 PF00296 Luciferase-like monooxygenase HQJ03_009655 PF01593 Flavin containing amine oxidoreductase HQJ03_009660 PF13302 Acetyltransferase (GNAT) domain HQJ03_009665 PF00248 Aldo/keto reductase family HQJ03_009670 PF07683 Cobalamin synthesis protein cobW C-terminal domain HQJ03_009670 PF02492 CobW/HypB/UreG, nucleotide-binding domain HQJ03_009675 PF00583 Acetyltransferase (GNAT) family HQJ03_009680 PF01297 Zinc-uptake complex component A periplasmic HQJ03_009690 PF13460 NAD(P)H-binding HQJ03_009695 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HQJ03_009700 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain HQJ03_009700 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain HQJ03_009710 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HQJ03_009715 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HQJ03_009725 PF00300 Histidine phosphatase superfamily (branch 1) HQJ03_009735 PF08757 CotH kinase protein HQJ03_009740 PF00293 NUDIX domain HQJ03_009745 PF09335 SNARE associated Golgi protein HQJ03_009750 PF01943 Polysaccharide biosynthesis protein HQJ03_009750 PF14667 Polysaccharide biosynthesis C-terminal domain HQJ03_009760 PF03773 Predicted permease HQJ03_009765 PF09323 Domain of unknown function (DUF1980) HQJ03_009770 PF03061 Thioesterase superfamily HQJ03_009780 PF13396 Phospholipase_D-nuclease N-terminal HQJ03_009780 PF13091 PLD-like domain HQJ03_009795 PF13460 NAD(P)H-binding HQJ03_009800 PF04306 Protein of unknown function (DUF456) HQJ03_009805 PF00571 CBS domain HQJ03_009805 PF01595 Cyclin M transmembrane N-terminal domain HQJ03_009805 PF03471 Transporter associated domain HQJ03_009820 PF05525 Branched-chain amino acid transport protein HQJ03_009825 PF01588 Putative tRNA binding domain HQJ03_009845 PF07454 Stage II sporulation protein P (SpoIIP) HQJ03_009855 PF02557 D-alanyl-D-alanine carboxypeptidase HQJ03_009865 PF01425 Amidase HQJ03_009870 PF07690 Major Facilitator Superfamily HQJ03_009880 PF01145 SPFH domain / Band 7 family HQJ03_009885 PF07454 Stage II sporulation protein P (SpoIIP) HQJ03_009900 PF01047 MarR family HQJ03_009905 PF07690 Major Facilitator Superfamily HQJ03_009915 PF00842 Alanine racemase, C-terminal domain HQJ03_009915 PF01168 Alanine racemase, N-terminal domain HQJ03_009935 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase HQJ03_009940 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) HQJ03_009940 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 HQJ03_009945 PF00392 Bacterial regulatory proteins, gntR family HQJ03_009945 PF00155 Aminotransferase class I and II HQJ03_009975 PF00583 Acetyltransferase (GNAT) family HQJ03_009990 PF06013 Proteins of 100 residues with WXG HQJ03_010005 PF08817 WXG100 protein secretion system (Wss), protein YukD HQJ03_010010 PF10140 WXG100 protein secretion system (Wss), protein YukC HQJ03_010015 PF01580 FtsK/SpoIIIE family HQJ03_010015 PF12538 DNA transporter HQJ03_010065 PF09579 Sporulation protein YtfJ (Spore_YtfJ) HQJ03_010090 PF01209 ubiE/COQ5 methyltransferase family HQJ03_010095 PF01268 Formate--tetrahydrofolate ligase HQJ03_010105 PF00271 Helicase conserved C-terminal domain HQJ03_010105 PF00270 DEAD/DEAH box helicase HQJ03_010110 PF01261 Xylose isomerase-like TIM barrel HQJ03_010115 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HQJ03_010125 PF00107 Zinc-binding dehydrogenase HQJ03_010125 PF08240 Alcohol dehydrogenase GroES-like domain HQJ03_010130 PF08281 Sigma-70, region 4 HQJ03_010130 PF04542 Sigma-70 region 2 HQJ03_010145 PF00258 Flavodoxin HQJ03_010145 PF01613 Flavin reductase like domain HQJ03_010155 PF00255 Glutathione peroxidase HQJ03_010160 PF13559 Domain of unknown function (DUF4129) HQJ03_010160 PF01841 Transglutaminase-like superfamily HQJ03_010160 PF11992 Domain of unknown function (DUF3488) HQJ03_010165 PF01882 Protein of unknown function DUF58 HQJ03_010170 PF17863 AAA lid domain HQJ03_010170 PF07726 ATPase family associated with various cellular activities (AAA) HQJ03_010175 PF00384 Molybdopterin oxidoreductase HQJ03_010175 PF01568 Molydopterin dinucleotide binding domain HQJ03_010175 PF14710 Respiratory nitrate reductase alpha N-terminal HQJ03_010180 PF14711 Respiratory nitrate reductase beta C-terminal HQJ03_010180 PF13247 4Fe-4S dicluster domain HQJ03_010185 PF02613 Nitrate reductase delta subunit HQJ03_010190 PF02665 Nitrate reductase gamma subunit HQJ03_010195 PF00027 Cyclic nucleotide-binding domain HQJ03_010195 PF00325 Bacterial regulatory proteins, crp family HQJ03_010200 PF06463 Molybdenum Cofactor Synthesis C HQJ03_010200 PF04055 Radical SAM superfamily HQJ03_010205 PF00899 ThiF family HQJ03_010210 PF00994 Probable molybdopterin binding domain HQJ03_010210 PF03453 MoeA N-terminal region (domain I and II) HQJ03_010210 PF03454 MoeA C-terminal region (domain IV) HQJ03_010215 PF02391 MoaE protein HQJ03_010225 PF07690 Major Facilitator Superfamily HQJ03_010250 PF01903 CbiX HQJ03_010255 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HQJ03_010260 PF00355 Rieske [2Fe-2S] domain HQJ03_010265 PF04324 BFD-like [2Fe-2S] binding domain HQJ03_010265 PF01077 Nitrite and sulphite reductase 4Fe-4S domain HQJ03_010265 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain HQJ03_010265 PF07992 Pyridine nucleotide-disulphide oxidoreductase HQJ03_010265 PF18267 Rubredoxin NAD+ reductase C-terminal domain HQJ03_010270 PF01814 Hemerythrin HHE cation binding domain HQJ03_010270 PF04405 Domain of Unknown function (DUF542) HQJ03_010305 PF04232 Stage V sporulation protein S (SpoVS) HQJ03_010330 PF17874 MalT-like TPR region HQJ03_010330 PF18801 response regulator aspartate phosphatase H, N terminal HQJ03_010345 PF01966 HD domain HQJ03_010350 PF00005 ABC transporter HQJ03_010350 PF16326 ABC transporter C-terminal domain HQJ03_010350 PF12848 ABC transporter HQJ03_010365 PF00436 Single-strand binding protein family HQJ03_010370 PF08712 Scaffold protein Nfu/NifU N terminal HQJ03_010370 PF13769 Virulence factor HQJ03_010380 PF06491 Disulphide isomerase HQJ03_010385 PF04445 Putative SAM-dependent methyltransferase HQJ03_010390 PF03485 Arginyl tRNA synthetase N terminal domain HQJ03_010390 PF05746 DALR anticodon binding domain HQJ03_010390 PF00750 tRNA synthetases class I (R) HQJ03_010415 PF08264 Anticodon-binding domain of tRNA HQJ03_010415 PF00133 tRNA synthetases class I (I, L, M and V) HQJ03_010440 PF00152 tRNA synthetases class II (D, K and N) HQJ03_010440 PF01336 OB-fold nucleic acid binding domain HQJ03_010445 PF00209 Sodium:neurotransmitter symporter family HQJ03_010460 PF10997 Alternate to MurJ HQJ03_010465 PF13419 Haloacid dehalogenase-like hydrolase HQJ03_010475 PF00465 Iron-containing alcohol dehydrogenase HQJ03_010480 PF01177 Asp/Glu/Hydantoin racemase HQJ03_010485 PF01980 tRNA-methyltransferase O HQJ03_010490 PF00583 Acetyltransferase (GNAT) family HQJ03_010495 PF11188 Protein of unknown function (DUF2975) HQJ03_010500 PF13443 Cro/C1-type HTH DNA-binding domain HQJ03_010520 PF05975 Bacterial ABC transporter protein EcsB HQJ03_010525 PF14005 YpjP-like protein HQJ03_010530 PF13419 Haloacid dehalogenase-like hydrolase HQJ03_010545 PF00144 Beta-lactamase HQJ03_010545 PF07930 D-aminopeptidase, domain B HQJ03_010550 PF00303 Thymidylate synthase HQJ03_010555 PF00186 Dihydrofolate reductase HQJ03_010560 PF03717 Penicillin-binding Protein dimerisation domain HQJ03_010560 PF00905 Penicillin binding protein transpeptidase domain HQJ03_010560 PF05223 NTF2-like N-terminal transpeptidase domain HQJ03_010565 PF02525 Flavodoxin-like fold HQJ03_010570 PF01553 Acyltransferase HQJ03_010575 PF03006 Haemolysin-III related HQJ03_010580 PF02416 mttA/Hcf106 family HQJ03_010585 PF00902 Sec-independent protein translocase protein (TatC) HQJ03_010595 PF02645 Uncharacterised protein, DegV family COG1307 HQJ03_010605 PF02630 SCO1/SenC HQJ03_010610 PF00011 Hsp20/alpha crystallin family HQJ03_010615 PF00733 Asparagine synthase HQJ03_010615 PF13537 Glutamine amidotransferase domain HQJ03_010630 PF01520 N-acetylmuramoyl-L-alanine amidase HQJ03_010630 PF05036 Sporulation related domain HQJ03_010635 PF01497 Periplasmic binding protein HQJ03_010640 PF01063 Amino-transferase class IV HQJ03_010645 PF00881 Nitroreductase family HQJ03_010655 PF00857 Isochorismatase family HQJ03_010660 PF00293 NUDIX domain HQJ03_010665 PF00011 Hsp20/alpha crystallin family HQJ03_010670 PF00924 Mechanosensitive ion channel HQJ03_010675 PF07730 Histidine kinase HQJ03_010675 PF13185 GAF domain HQJ03_010680 PF00196 Bacterial regulatory proteins, luxR family HQJ03_010680 PF00072 Response regulator receiver domain HQJ03_010685 PF01418 Helix-turn-helix domain, rpiR family HQJ03_010685 PF01380 SIS domain HQJ03_010690 PF02567 Phenazine biosynthesis-like protein HQJ03_010695 PF00107 Zinc-binding dehydrogenase HQJ03_010695 PF08240 Alcohol dehydrogenase GroES-like domain HQJ03_010710 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HQJ03_010710 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HQJ03_010715 PF02447 GntP family permease HQJ03_010720 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HQJ03_010720 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain HQJ03_010740 PF03358 NADPH-dependent FMN reductase HQJ03_010755 PF00005 ABC transporter HQJ03_010755 PF00571 CBS domain HQJ03_010760 PF00528 Binding-protein-dependent transport system inner membrane component HQJ03_010765 PF13520 Amino acid permease HQJ03_010795 PF03471 Transporter associated domain HQJ03_010795 PF00571 CBS domain HQJ03_010795 PF01595 Cyclin M transmembrane N-terminal domain HQJ03_010800 PF00171 Aldehyde dehydrogenase family HQJ03_010805 PF07997 Protein of unknown function (DUF1694) HQJ03_010810 PF09385 Histidine kinase N terminal HQJ03_010820 PF00202 Aminotransferase class-III HQJ03_010825 PF01144 Coenzyme A transferase HQJ03_010830 PF01144 Coenzyme A transferase HQJ03_010835 PF07687 Peptidase dimerisation domain HQJ03_010835 PF01546 Peptidase family M20/M25/M40 HQJ03_010840 PF00583 Acetyltransferase (GNAT) family HQJ03_010845 PF00158 Sigma-54 interaction domain HQJ03_010845 PF13426 PAS domain HQJ03_010845 PF02954 Bacterial regulatory protein, Fis family HQJ03_010850 PF12544 Lysine-2,3-aminomutase HQJ03_010855 PF14122 YokU-like protein, putative antitoxin HQJ03_010860 PF06855 YozE SAM-like fold HQJ03_010875 PF14162 YozD-like protein HQJ03_010885 PF00069 Protein kinase domain HQJ03_010885 PF08239 Bacterial SH3 domain HQJ03_010895 PF01569 PAP2 superfamily HQJ03_010900 PF01545 Cation efflux family HQJ03_010900 PF16916 Dimerisation domain of Zinc Transporter HQJ03_010905 PF00085 Thioredoxin HQJ03_010975 PF10676 Spore germination protein gerPA/gerPF HQJ03_010990 PF00106 short chain dehydrogenase HQJ03_011010 PF00912 Transglycosylase HQJ03_011010 PF00905 Penicillin binding protein transpeptidase domain HQJ03_011020 PF07690 Major Facilitator Superfamily HQJ03_011025 PF01521 Iron-sulphur cluster biosynthesis HQJ03_011030 PF00285 Citrate synthase, C-terminal domain HQJ03_011035 PF03972 MmgE/PrpD family HQJ03_011045 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HQJ03_011045 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HQJ03_011045 PF02770 Acyl-CoA dehydrogenase, middle domain HQJ03_011050 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase HQJ03_011050 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HQJ03_011055 PF00171 Aldehyde dehydrogenase family HQJ03_011060 PF01810 LysE type translocator HQJ03_011065 PF00378 Enoyl-CoA hydratase/isomerase HQJ03_011080 PF12320 Type 5 capsule protein repressor C-terminal domain HQJ03_011080 PF00149 Calcineurin-like phosphoesterase HQJ03_011085 PF13476 AAA domain HQJ03_011095 PF01022 Bacterial regulatory protein, arsR family HQJ03_011110 PF07690 Major Facilitator Superfamily HQJ03_011115 PF00106 short chain dehydrogenase HQJ03_011120 PF00425 chorismate binding enzyme HQJ03_011125 PF13193 AMP-binding enzyme C-terminal domain HQJ03_011125 PF00501 AMP-binding enzyme HQJ03_011130 PF00857 Isochorismatase family HQJ03_011130 PF00550 Phosphopantetheine attachment site HQJ03_011135 PF00501 AMP-binding enzyme HQJ03_011135 PF00668 Condensation domain HQJ03_011135 PF13193 AMP-binding enzyme C-terminal domain HQJ03_011135 PF00550 Phosphopantetheine attachment site HQJ03_011135 PF00975 Thioesterase domain HQJ03_011140 PF03621 MbtH-like protein HQJ03_011145 PF07690 Major Facilitator Superfamily HQJ03_011160 PF00216 Bacterial DNA-binding protein HQJ03_011170 PF05163 DinB family HQJ03_011175 PF00082 Subtilase family HQJ03_011180 PF01235 Sodium:alanine symporter family HQJ03_011200 PF00849 RNA pseudouridylate synthase HQJ03_011200 PF01479 S4 domain HQJ03_011205 PF03129 Anticodon binding domain HQJ03_011205 PF02824 TGS domain HQJ03_011205 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HQJ03_011205 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HQJ03_011210 PF00005 ABC transporter HQJ03_011230 PF12911 N-terminal TM domain of oligopeptide transport permease C HQJ03_011230 PF00528 Binding-protein-dependent transport system inner membrane component HQJ03_011235 PF00205 Thiamine pyrophosphate enzyme, central domain HQJ03_011235 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HQJ03_011235 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HQJ03_011275 PF00027 Cyclic nucleotide-binding domain HQJ03_011290 PF01047 MarR family HQJ03_011300 PF00753 Metallo-beta-lactamase superfamily HQJ03_011300 PF16123 Hydroxyacylglutathione hydrolase C-terminus HQJ03_011310 PF03176 MMPL family HQJ03_011325 PF00302 Chloramphenicol acetyltransferase HQJ03_011340 PF00583 Acetyltransferase (GNAT) family HQJ03_011365 PF01593 Flavin containing amine oxidoreductase HQJ03_011375 PF13302 Acetyltransferase (GNAT) domain HQJ03_011385 PF00313 'Cold-shock' DNA-binding domain HQJ03_011405 PF03466 LysR substrate binding domain HQJ03_011405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HQJ03_011410 PF02774 Semialdehyde dehydrogenase, dimerisation domain HQJ03_011410 PF01118 Semialdehyde dehydrogenase, NAD binding domain HQJ03_011430 PF03466 LysR substrate binding domain HQJ03_011430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HQJ03_011435 PF03473 MOSC domain HQJ03_011435 PF03475 3-alpha domain HQJ03_011450 PF00005 ABC transporter HQJ03_011450 PF00664 ABC transporter transmembrane region HQJ03_011455 PF00664 ABC transporter transmembrane region HQJ03_011455 PF00005 ABC transporter HQJ03_011470 PF14659 Phage integrase, N-terminal SAM-like domain HQJ03_011470 PF00589 Phage integrase family HQJ03_011475 PF01381 Helix-turn-helix HQJ03_011490 PF01381 Helix-turn-helix HQJ03_011520 PF01695 IstB-like ATP binding protein HQJ03_011530 PF18277 AbrB C-terminal domain HQJ03_011530 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin HQJ03_011600 PF00589 Phage integrase family HQJ03_011610 PF01555 DNA methylase HQJ03_011630 PF03354 Phage Terminase HQJ03_011640 PF00574 Clp protease HQJ03_011720 PF01510 N-acetylmuramoyl-L-alanine amidase HQJ03_011740 PF01810 LysE type translocator HQJ03_011745 PF01381 Helix-turn-helix HQJ03_011745 PF07883 Cupin domain HQJ03_011775 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HQJ03_011775 PF07992 Pyridine nucleotide-disulphide oxidoreductase HQJ03_011780 PF08281 Sigma-70, region 4 HQJ03_011780 PF12680 SnoaL-like domain HQJ03_011780 PF04542 Sigma-70 region 2 HQJ03_011805 PF02638 Glycosyl hydrolase-like 10 HQJ03_011815 PF02378 Phosphotransferase system, EIIC HQJ03_011825 PF03702 Anhydro-N-acetylmuramic acid kinase HQJ03_011830 PF01869 BadF/BadG/BcrA/BcrD ATPase family HQJ03_011835 PF02660 Glycerol-3-phosphate acyltransferase HQJ03_011840 PF00266 Aminotransferase class-V HQJ03_011845 PF00291 Pyridoxal-phosphate dependent enzyme HQJ03_011850 PF01047 MarR family HQJ03_011855 PF07690 Major Facilitator Superfamily HQJ03_011865 PF00753 Metallo-beta-lactamase superfamily HQJ03_011865 PF16123 Hydroxyacylglutathione hydrolase C-terminus HQJ03_011875 PF00271 Helicase conserved C-terminal domain HQJ03_011875 PF00270 DEAD/DEAH box helicase HQJ03_011885 PF17932 Tetracyclin repressor-like, C-terminal domain HQJ03_011885 PF00440 Bacterial regulatory proteins, tetR family HQJ03_011905 PF03848 Tellurite resistance protein TehB HQJ03_011905 PF09313 Domain of unknown function (DUF1971) HQJ03_011915 PF08241 Methyltransferase domain HQJ03_011920 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HQJ03_011920 PF00205 Thiamine pyrophosphate enzyme, central domain HQJ03_011920 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HQJ03_011925 PF01047 MarR family HQJ03_011930 PF00300 Histidine phosphatase superfamily (branch 1) HQJ03_011935 PF14171 Toxin SpoIISA, type II toxin-antitoxin system HQJ03_011955 PF01546 Peptidase family M20/M25/M40 HQJ03_011955 PF07687 Peptidase dimerisation domain HQJ03_011970 PF04371 Porphyromonas-type peptidyl-arginine deiminase HQJ03_011975 PF00196 Bacterial regulatory proteins, luxR family HQJ03_011975 PF00072 Response regulator receiver domain HQJ03_011985 PF18277 AbrB C-terminal domain HQJ03_011985 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin HQJ03_011995 PF01925 Sulfite exporter TauE/SafE HQJ03_012000 PF00132 Bacterial transferase hexapeptide (six repeats) HQJ03_012005 PF00768 D-alanyl-D-alanine carboxypeptidase HQJ03_012005 PF07943 Penicillin-binding protein 5, C-terminal domain HQJ03_012020 PF07690 Major Facilitator Superfamily HQJ03_012025 PF13193 AMP-binding enzyme C-terminal domain HQJ03_012025 PF00668 Condensation domain HQJ03_012025 PF00550 Phosphopantetheine attachment site HQJ03_012025 PF00501 AMP-binding enzyme HQJ03_012030 PF00501 AMP-binding enzyme HQJ03_012030 PF07993 Male sterility protein HQJ03_012030 PF00550 Phosphopantetheine attachment site HQJ03_012030 PF00668 Condensation domain HQJ03_012030 PF13193 AMP-binding enzyme C-terminal domain HQJ03_012035 PF00550 Phosphopantetheine attachment site HQJ03_012035 PF00668 Condensation domain HQJ03_012035 PF00501 AMP-binding enzyme HQJ03_012035 PF13193 AMP-binding enzyme C-terminal domain HQJ03_012040 PF01648 4'-phosphopantetheinyl transferase superfamily HQJ03_012045 PF00975 Thioesterase domain HQJ03_012055 PF05139 Erythromycin esterase HQJ03_012070 PF13302 Acetyltransferase (GNAT) domain HQJ03_012080 PF01520 N-acetylmuramoyl-L-alanine amidase HQJ03_012080 PF00395 S-layer homology domain HQJ03_012110 PF11954 Domain of unknown function (DUF3471) HQJ03_012110 PF00144 Beta-lactamase HQJ03_012115 PF05223 NTF2-like N-terminal transpeptidase domain HQJ03_012115 PF03717 Penicillin-binding Protein dimerisation domain HQJ03_012115 PF00905 Penicillin binding protein transpeptidase domain HQJ03_012120 PF04542 Sigma-70 region 2 HQJ03_012120 PF08281 Sigma-70, region 4 HQJ03_012130 PF00905 Penicillin binding protein transpeptidase domain HQJ03_012130 PF03717 Penicillin-binding Protein dimerisation domain HQJ03_012135 PF00905 Penicillin binding protein transpeptidase domain HQJ03_012135 PF03717 Penicillin-binding Protein dimerisation domain HQJ03_012145 PF00149 Calcineurin-like phosphoesterase HQJ03_012155 PF00005 ABC transporter HQJ03_012165 PF00440 Bacterial regulatory proteins, tetR family HQJ03_012180 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HQJ03_012180 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HQJ03_012180 PF02770 Acyl-CoA dehydrogenase, middle domain HQJ03_012185 PF00289 Biotin carboxylase, N-terminal domain HQJ03_012185 PF02785 Biotin carboxylase C-terminal domain HQJ03_012185 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HQJ03_012190 PF00364 Biotin-requiring enzyme HQJ03_012195 PF00682 HMGL-like HQJ03_012200 PF00378 Enoyl-CoA hydratase/isomerase HQJ03_012205 PF01039 Carboxyl transferase domain HQJ03_012210 PF16177 Acetyl-coenzyme A synthetase N-terminus HQJ03_012210 PF00501 AMP-binding enzyme HQJ03_012210 PF13193 AMP-binding enzyme C-terminal domain HQJ03_012235 PF00485 Phosphoribulokinase / Uridine kinase family HQJ03_012255 PF00768 D-alanyl-D-alanine carboxypeptidase HQJ03_012255 PF07943 Penicillin-binding protein 5, C-terminal domain HQJ03_012260 PF00512 His Kinase A (phospho-acceptor) domain HQJ03_012260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQJ03_012265 PF00072 Response regulator receiver domain HQJ03_012265 PF00486 Transcriptional regulatory protein, C terminal HQJ03_012270 PF01966 HD domain HQJ03_012280 PF01048 Phosphorylase superfamily HQJ03_012295 PF01447 Thermolysin metallopeptidase, catalytic domain HQJ03_012295 PF07504 Fungalysin/Thermolysin Propeptide Motif HQJ03_012295 PF03413 Peptidase propeptide and YPEB domain HQJ03_012295 PF02868 Thermolysin metallopeptidase, alpha-helical domain HQJ03_012300 PF12833 Helix-turn-helix domain HQJ03_012300 PF17853 GGDEF-like domain HQJ03_012330 PF00005 ABC transporter HQJ03_012330 PF17760 UvrA interaction domain HQJ03_012330 PF17755 UvrA DNA-binding domain HQJ03_012335 PF00376 MerR family regulatory protein HQJ03_012335 PF09278 MerR, DNA binding HQJ03_012340 PF07690 Major Facilitator Superfamily HQJ03_012350 PF01638 HxlR-like helix-turn-helix HQJ03_012395 PF00392 Bacterial regulatory proteins, gntR family HQJ03_012395 PF00155 Aminotransferase class I and II HQJ03_012405 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal HQJ03_012405 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal HQJ03_012420 PF00107 Zinc-binding dehydrogenase HQJ03_012420 PF08240 Alcohol dehydrogenase GroES-like domain HQJ03_012430 PF04239 Protein of unknown function (DUF421) HQJ03_012445 PF08450 SMP-30/Gluconolactonase/LRE-like region HQJ03_012455 PF01921 tRNA synthetases class I (K) HQJ03_012460 PF07486 Cell Wall Hydrolase HQJ03_012470 PF00486 Transcriptional regulatory protein, C terminal HQJ03_012470 PF00072 Response regulator receiver domain HQJ03_012475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQJ03_012485 PF12848 ABC transporter HQJ03_012485 PF00005 ABC transporter HQJ03_012500 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit HQJ03_012510 PF00005 ABC transporter HQJ03_012515 PF02687 FtsX-like permease family HQJ03_012535 PF03447 Homoserine dehydrogenase, NAD binding domain HQJ03_012535 PF00742 Homoserine dehydrogenase HQJ03_012540 PF00155 Aminotransferase class I and II HQJ03_012540 PF00392 Bacterial regulatory proteins, gntR family HQJ03_012545 PF01820 D-ala D-ala ligase N-terminus HQJ03_012545 PF07478 D-ala D-ala ligase C-terminus HQJ03_012550 PF03070 TENA/THI-4/PQQC family HQJ03_012610 PF00067 Cytochrome P450 HQJ03_012620 PF00132 Bacterial transferase hexapeptide (six repeats) HQJ03_012625 PF07561 Domain of Unknown Function (DUF1540) HQJ03_012635 PF00067 Cytochrome P450 HQJ03_012650 PF13426 PAS domain HQJ03_012650 PF13188 PAS domain HQJ03_012650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQJ03_012650 PF00512 His Kinase A (phospho-acceptor) domain HQJ03_012650 PF00989 PAS fold HQJ03_012655 PF03717 Penicillin-binding Protein dimerisation domain HQJ03_012655 PF00905 Penicillin binding protein transpeptidase domain HQJ03_012660 PF10502 Signal peptidase, peptidase S26 HQJ03_012665 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase HQJ03_012670 PF01177 Asp/Glu/Hydantoin racemase HQJ03_012675 PF07155 ECF-type riboflavin transporter, S component HQJ03_012680 PF12558 ATP-binding cassette cobalt transporter HQJ03_012680 PF00005 ABC transporter HQJ03_012695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQJ03_012695 PF00512 His Kinase A (phospho-acceptor) domain HQJ03_012740 PF00293 NUDIX domain HQJ03_012740 PF13344 Haloacid dehalogenase-like hydrolase HQJ03_012760 PF04229 GrpB protein HQJ03_012765 PF00107 Zinc-binding dehydrogenase HQJ03_012765 PF08240 Alcohol dehydrogenase GroES-like domain HQJ03_012770 PF01569 PAP2 superfamily HQJ03_012775 PF03793 PASTA domain HQJ03_012775 PF03717 Penicillin-binding Protein dimerisation domain HQJ03_012775 PF00905 Penicillin binding protein transpeptidase domain HQJ03_012830 PF07690 Major Facilitator Superfamily HQJ03_012835 PF13411 MerR HTH family regulatory protein HQJ03_012835 PF06445 GyrI-like small molecule binding domain HQJ03_012855 PF03009 Glycerophosphoryl diester phosphodiesterase family HQJ03_012875 PF00392 Bacterial regulatory proteins, gntR family HQJ03_012875 PF00155 Aminotransferase class I and II HQJ03_012880 PF00892 EamA-like transporter family HQJ03_012885 PF01270 Glycosyl hydrolases family 8 HQJ03_012890 PF01156 Inosine-uridine preferring nucleoside hydrolase HQJ03_012905 PF13344 Haloacid dehalogenase-like hydrolase HQJ03_012905 PF00293 NUDIX domain HQJ03_012915 PF00144 Beta-lactamase HQJ03_012925 PF07690 Major Facilitator Superfamily HQJ03_012940 PF00293 NUDIX domain HQJ03_012940 PF09297 NADH pyrophosphatase zinc ribbon domain HQJ03_012945 PF02767 DNA polymerase III beta subunit, central domain HQJ03_012945 PF00712 DNA polymerase III beta subunit, N-terminal domain HQJ03_012945 PF02768 DNA polymerase III beta subunit, C-terminal domain HQJ03_012955 PF12706 Beta-lactamase superfamily domain HQJ03_012965 PF01042 Endoribonuclease L-PSP HQJ03_012970 PF09234 Domain of unknown function (DUF1963) HQJ03_012995 PF01734 Patatin-like phospholipase HQJ03_013000 PF08000 Bacterial PH domain HQJ03_013010 PF12867 DinB superfamily HQJ03_013025 PF02673 Bacitracin resistance protein BacA HQJ03_013035 PF01541 GIY-YIG catalytic domain HQJ03_013075 PF01266 FAD dependent oxidoreductase HQJ03_013105 PF13419 Haloacid dehalogenase-like hydrolase HQJ03_013110 PF00072 Response regulator receiver domain HQJ03_013110 PF00486 Transcriptional regulatory protein, C terminal HQJ03_013115 PF16736 Single Cache-like HQJ03_013115 PF00989 PAS fold HQJ03_013115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQJ03_013115 PF00512 His Kinase A (phospho-acceptor) domain HQJ03_013130 PF00005 ABC transporter HQJ03_013135 PF02687 FtsX-like permease family HQJ03_013135 PF12704 MacB-like periplasmic core domain HQJ03_013145 PF01569 PAP2 superfamily HQJ03_013150 PF00128 Alpha amylase, catalytic domain HQJ03_013150 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) HQJ03_013150 PF03714 Bacterial pullanase-associated domain HQJ03_013155 PF03413 Peptidase propeptide and YPEB domain HQJ03_013155 PF07504 Fungalysin/Thermolysin Propeptide Motif HQJ03_013155 PF02868 Thermolysin metallopeptidase, alpha-helical domain HQJ03_013155 PF01447 Thermolysin metallopeptidase, catalytic domain HQJ03_013160 PF02872 5'-nucleotidase, C-terminal domain HQJ03_013160 PF00149 Calcineurin-like phosphoesterase HQJ03_013175 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HQJ03_013180 PF00344 SecY translocase HQJ03_013185 PF00892 EamA-like transporter family HQJ03_013190 PF00155 Aminotransferase class I and II HQJ03_013190 PF00392 Bacterial regulatory proteins, gntR family HQJ03_013195 PF00561 alpha/beta hydrolase fold HQJ03_013230 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) HQJ03_013235 PF03413 Peptidase propeptide and YPEB domain HQJ03_013235 PF14620 YpeB sporulation HQJ03_013240 PF07486 Cell Wall Hydrolase HQJ03_013240 PF01471 Putative peptidoglycan binding domain HQJ03_013260 PF03301 Tryptophan 2,3-dioxygenase HQJ03_013265 PF04199 Putative cyclase HQJ03_013270 PF00266 Aminotransferase class-V HQJ03_013275 PF00440 Bacterial regulatory proteins, tetR family HQJ03_013275 PF08359 YsiA-like protein, C-terminal region HQJ03_013280 PF13344 Haloacid dehalogenase-like hydrolase HQJ03_013280 PF00293 NUDIX domain HQJ03_013300 PF01590 GAF domain HQJ03_013300 PF02954 Bacterial regulatory protein, Fis family HQJ03_013300 PF00158 Sigma-54 interaction domain HQJ03_013310 PF13302 Acetyltransferase (GNAT) domain HQJ03_013315 PF00455 DeoR C terminal sensor domain HQJ03_013315 PF08220 DeoR-like helix-turn-helix domain HQJ03_013330 PF02082 Transcriptional regulator HQJ03_013345 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HQJ03_013345 PF07992 Pyridine nucleotide-disulphide oxidoreductase HQJ03_013350 PF02817 e3 binding domain HQJ03_013350 PF00364 Biotin-requiring enzyme HQJ03_013350 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HQJ03_013355 PF02780 Transketolase, C-terminal domain HQJ03_013355 PF02779 Transketolase, pyrimidine binding domain HQJ03_013360 PF00676 Dehydrogenase E1 component HQJ03_013375 PF00106 short chain dehydrogenase HQJ03_013380 PF13789 Domain of unknown function (DUF4181) HQJ03_013405 PF00528 Binding-protein-dependent transport system inner membrane component HQJ03_013410 PF00005 ABC transporter HQJ03_013410 PF00571 CBS domain HQJ03_013415 PF04069 Substrate binding domain of ABC-type glycine betaine transport system HQJ03_013420 PF00574 Clp protease HQJ03_013435 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) HQJ03_013440 PF13673 Acetyltransferase (GNAT) domain HQJ03_013445 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading HQJ03_013445 PF18416 N-acetylglucosamine binding protein domain 2 HQJ03_013450 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase HQJ03_013455 PF03781 Sulfatase-modifying factor enzyme 1 HQJ03_013470 PF10990 Protein of unknown function (DUF2809) HQJ03_013475 PF08241 Methyltransferase domain HQJ03_013480 PF04237 YjbR HQJ03_013520 PF13538 UvrD-like helicase C-terminal domain HQJ03_013535 PF09382 RQC domain HQJ03_013535 PF16124 RecQ zinc-binding HQJ03_013535 PF00271 Helicase conserved C-terminal domain HQJ03_013535 PF00270 DEAD/DEAH box helicase HQJ03_013535 PF00570 HRDC domain HQJ03_013565 PF12123 N-acetylmuramoyl-l-alanine amidase HQJ03_013565 PF01510 N-acetylmuramoyl-L-alanine amidase HQJ03_013585 PF01368 DHH family HQJ03_013585 PF02833 DHHA2 domain HQJ03_013590 PF18416 N-acetylglucosamine binding protein domain 2 HQJ03_013590 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading HQJ03_013605 PF02627 Carboxymuconolactone decarboxylase family HQJ03_013610 PF01235 Sodium:alanine symporter family HQJ03_013615 PF00171 Aldehyde dehydrogenase family HQJ03_013620 PF00701 Dihydrodipicolinate synthetase family HQJ03_013625 PF05544 Proline racemase HQJ03_013630 PF05544 Proline racemase HQJ03_013635 PF01266 FAD dependent oxidoreductase HQJ03_013640 PF02954 Bacterial regulatory protein, Fis family HQJ03_013640 PF13188 PAS domain HQJ03_013640 PF00158 Sigma-54 interaction domain HQJ03_013645 PF04324 BFD-like [2Fe-2S] binding domain HQJ03_013645 PF07992 Pyridine nucleotide-disulphide oxidoreductase HQJ03_013655 PF07992 Pyridine nucleotide-disulphide oxidoreductase HQJ03_013655 PF04324 BFD-like [2Fe-2S] binding domain HQJ03_013670 PF08876 Domain of unknown function (DUF1836) HQJ03_013675 PF09335 SNARE associated Golgi protein HQJ03_013685 PF04914 DltD protein HQJ03_013695 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HQJ03_013700 PF00877 NlpC/P60 family HQJ03_013700 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain HQJ03_013705 PF13378 Enolase C-terminal domain-like HQJ03_013705 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain HQJ03_013720 PF00248 Aldo/keto reductase family HQJ03_013725 PF01965 DJ-1/PfpI family HQJ03_013755 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain HQJ03_013755 PF02129 X-Pro dipeptidyl-peptidase (S15 family) HQJ03_013765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQJ03_013765 PF00512 His Kinase A (phospho-acceptor) domain HQJ03_013765 PF00672 HAMP domain HQJ03_013770 PF00072 Response regulator receiver domain HQJ03_013770 PF00486 Transcriptional regulatory protein, C terminal HQJ03_013795 PF13419 Haloacid dehalogenase-like hydrolase HQJ03_013800 PF01048 Phosphorylase superfamily HQJ03_013805 PF03808 Glycosyl transferase WecB/TagA/CpsF family HQJ03_013810 PF01432 Peptidase family M3 HQJ03_013810 PF08439 Oligopeptidase F HQJ03_013815 PF02645 Uncharacterised protein, DegV family COG1307 HQJ03_013820 PF07552 Spore Coat Protein X and V domain HQJ03_013855 PF07690 Major Facilitator Superfamily HQJ03_013865 PF04519 Polymer-forming cytoskeletal HQJ03_013870 PF13171 Protein of unknown function (DUF4004) HQJ03_013875 PF12793 Sugar transport-related sRNA regulator N-term HQJ03_013875 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HQJ03_013880 PF07690 Major Facilitator Superfamily HQJ03_013900 PF04226 Transglycosylase associated protein HQJ03_013915 PF08241 Methyltransferase domain HQJ03_013950 PF00155 Aminotransferase class I and II HQJ03_013955 PF07977 FabA-like domain HQJ03_013960 PF03630 Fumble HQJ03_013980 PF00005 ABC transporter HQJ03_014030 PF01594 AI-2E family transporter HQJ03_014045 PF00296 Luciferase-like monooxygenase HQJ03_014050 PF00528 Binding-protein-dependent transport system inner membrane component HQJ03_014055 PF09084 NMT1/THI5 like HQJ03_014060 PF00005 ABC transporter HQJ03_014095 PF02522 Aminoglycoside 3-N-acetyltransferase HQJ03_014105 PF13536 Putative multidrug resistance efflux transporter HQJ03_014130 PF08713 DNA alkylation repair enzyme HQJ03_014135 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HQJ03_014145 PF01522 Polysaccharide deacetylase HQJ03_014155 PF03741 Integral membrane protein TerC family HQJ03_014160 PF00884 Sulfatase HQJ03_014165 PF00005 ABC transporter HQJ03_014165 PF12848 ABC transporter HQJ03_014175 PF03176 MMPL family HQJ03_014180 PF00440 Bacterial regulatory proteins, tetR family HQJ03_014180 PF16295 Tetracyclin repressor-like, C-terminal domain HQJ03_014190 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HQJ03_014195 PF02153 Prephenate dehydrogenase HQJ03_014195 PF01842 ACT domain HQJ03_014200 PF00155 Aminotransferase class I and II HQJ03_014205 PF01264 Chorismate synthase HQJ03_014210 PF01817 Chorismate mutase type II HQJ03_014210 PF00793 DAHP synthetase I family HQJ03_014230 PF01636 Phosphotransferase enzyme family HQJ03_014255 PF01476 LysM domain HQJ03_014255 PF06725 3D domain HQJ03_014265 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HQJ03_014290 PF06039 Malate:quinone oxidoreductase (Mqo) HQJ03_014295 PF13407 Periplasmic binding protein domain HQJ03_014300 PF02653 Branched-chain amino acid transport system / permease component HQJ03_014305 PF02653 Branched-chain amino acid transport system / permease component HQJ03_014315 PF00325 Bacterial regulatory proteins, crp family HQJ03_014315 PF04198 Putative sugar-binding domain HQJ03_014320 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HQJ03_014320 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HQJ03_014330 PF01791 DeoC/LacD family aldolase HQJ03_014340 PF03992 Antibiotic biosynthesis monooxygenase HQJ03_014360 PF01773 Na+ dependent nucleoside transporter N-terminus HQJ03_014360 PF07662 Na+ dependent nucleoside transporter C-terminus HQJ03_014365 PF00171 Aldehyde dehydrogenase family HQJ03_014370 PF01472 PUA domain HQJ03_014370 PF00696 Amino acid kinase family HQJ03_014375 PF14748 Pyrroline-5-carboxylate reductase dimerisation HQJ03_014375 PF03807 NADP oxidoreductase coenzyme F420-dependent HQJ03_014380 PF01546 Peptidase family M20/M25/M40 HQJ03_014385 PF09339 IclR helix-turn-helix domain HQJ03_014385 PF01614 Bacterial transcriptional regulator HQJ03_014390 PF00324 Amino acid permease HQJ03_014400 PF00487 Fatty acid desaturase HQJ03_014405 PF05547 Immune inhibitor A peptidase M6 HQJ03_014410 PF04294 VanW like protein HQJ03_014415 PF00245 Alkaline phosphatase HQJ03_014420 PF11188 Protein of unknown function (DUF2975) HQJ03_014425 PF13443 Cro/C1-type HTH DNA-binding domain HQJ03_014445 PF13302 Acetyltransferase (GNAT) domain HQJ03_014450 PF12681 Glyoxalase-like domain HQJ03_014475 PF07726 ATPase family associated with various cellular activities (AAA) HQJ03_014475 PF17863 AAA lid domain HQJ03_014490 PF07690 Major Facilitator Superfamily HQJ03_014500 PF00535 Glycosyl transferase family 2 HQJ03_014515 PF00535 Glycosyl transferase family 2 HQJ03_014520 PF00535 Glycosyl transferase family 2 HQJ03_014530 PF00202 Aminotransferase class-III HQJ03_014535 PF00199 Catalase HQJ03_014535 PF06628 Catalase-related immune-responsive HQJ03_014540 PF04151 Bacterial pre-peptidase C-terminal domain HQJ03_014540 PF18496 Collagenase G catalytic helper subdomain HQJ03_014540 PF01752 Collagenase HQJ03_014540 PF08453 Peptidase family M9 N-terminal HQJ03_014550 PF01979 Amidohydrolase family HQJ03_014550 PF13382 Adenine deaminase C-terminal domain HQJ03_014555 PF00144 Beta-lactamase HQJ03_014575 PF17863 AAA lid domain HQJ03_014575 PF07726 ATPase family associated with various cellular activities (AAA) HQJ03_014595 PF04740 LXG domain of WXG superfamily HQJ03_014595 PF14436 Bacterial EndoU nuclease HQJ03_014615 PF00881 Nitroreductase family HQJ03_014620 PF01047 MarR family HQJ03_014625 PF00679 Elongation factor G C-terminus HQJ03_014625 PF14492 Elongation Factor G, domain II HQJ03_014625 PF03764 Elongation factor G, domain IV HQJ03_014625 PF00009 Elongation factor Tu GTP binding domain HQJ03_014635 PF00293 NUDIX domain HQJ03_014650 PF16363 GDP-mannose 4,6 dehydratase HQJ03_014665 PF12833 Helix-turn-helix domain HQJ03_014670 PF14437 MafB19-like deaminase HQJ03_014670 PF01171 PP-loop family HQJ03_014670 PF11734 TilS substrate C-terminal domain HQJ03_014675 PF00583 Acetyltransferase (GNAT) family HQJ03_014690 PF00892 EamA-like transporter family HQJ03_014695 PF00392 Bacterial regulatory proteins, gntR family HQJ03_014695 PF00155 Aminotransferase class I and II HQJ03_014710 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 HQJ03_014715 PF13031 Protein of unknown function (DUF3892) HQJ03_014720 PF00672 HAMP domain HQJ03_014720 PF00512 His Kinase A (phospho-acceptor) domain HQJ03_014725 PF00486 Transcriptional regulatory protein, C terminal HQJ03_014725 PF00072 Response regulator receiver domain HQJ03_014730 PF00561 alpha/beta hydrolase fold HQJ03_014765 PF01925 Sulfite exporter TauE/SafE HQJ03_014775 PF00324 Amino acid permease HQJ03_014785 PF08713 DNA alkylation repair enzyme HQJ03_014795 PF00512 His Kinase A (phospho-acceptor) domain HQJ03_014795 PF18698 Histidine kinase sensor domain HQJ03_014795 PF00672 HAMP domain HQJ03_014795 PF00989 PAS fold HQJ03_014795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQJ03_014800 PF00072 Response regulator receiver domain HQJ03_014800 PF00486 Transcriptional regulatory protein, C terminal HQJ03_014810 PF02687 FtsX-like permease family HQJ03_014810 PF12704 MacB-like periplasmic core domain HQJ03_014810 PF00005 ABC transporter HQJ03_014825 PF00293 NUDIX domain HQJ03_014830 PF04989 Cephalosporin hydroxylase HQJ03_014835 PF10502 Signal peptidase, peptidase S26 HQJ03_014840 PF03717 Penicillin-binding Protein dimerisation domain HQJ03_014840 PF00905 Penicillin binding protein transpeptidase domain HQJ03_014845 PF02146 Sir2 family HQJ03_014850 PF01470 Pyroglutamyl peptidase HQJ03_014865 PF03746 LamB/YcsF family HQJ03_014870 PF02626 Carboxyltransferase domain, subdomain A and B HQJ03_014875 PF02682 Carboxyltransferase domain, subdomain C and D HQJ03_014880 PF09339 IclR helix-turn-helix domain HQJ03_014880 PF01614 Bacterial transcriptional regulator HQJ03_014885 PF10502 Signal peptidase, peptidase S26 HQJ03_014890 PF03932 CutC family HQJ03_014905 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HQJ03_014905 PF02770 Acyl-CoA dehydrogenase, middle domain HQJ03_014905 PF08028 Acyl-CoA dehydrogenase, C-terminal domain HQJ03_014920 PF07670 Nucleoside recognition HQJ03_014935 PF10903 Protein of unknown function (DUF2691) HQJ03_014940 PF02915 Rubrerythrin HQJ03_014955 PF00440 Bacterial regulatory proteins, tetR family HQJ03_014960 PF05547 Immune inhibitor A peptidase M6 HQJ03_014965 PF00391 PEP-utilising enzyme, mobile domain HQJ03_014965 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain HQJ03_014970 PF00753 Metallo-beta-lactamase superfamily HQJ03_014975 PF10710 Protein of unknown function (DUF2512) HQJ03_014980 PF11553 Protein of unknown function (DUF3231) HQJ03_014985 PF00269 Small, acid-soluble spore proteins, alpha/beta type HQJ03_014990 PF13823 Alcohol dehydrogenase GroES-associated HQJ03_014990 PF00107 Zinc-binding dehydrogenase HQJ03_014990 PF08240 Alcohol dehydrogenase GroES-like domain HQJ03_014995 PF00206 Lyase HQJ03_014995 PF10415 Fumarase C C-terminus HQJ03_015000 PF00710 Asparaginase, N-terminal HQJ03_015000 PF17763 Glutaminase/Asparaginase C-terminal domain HQJ03_015005 PF01381 Helix-turn-helix HQJ03_015020 PF05504 Spore germination B3/ GerAC like, C-terminal HQJ03_015025 PF03845 Spore germination protein HQJ03_015030 PF03323 Bacillus/Clostridium GerA spore germination protein HQJ03_015035 PF00989 PAS fold HQJ03_015035 PF13188 PAS domain HQJ03_015035 PF13426 PAS domain HQJ03_015035 PF00512 His Kinase A (phospho-acceptor) domain HQJ03_015035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQJ03_015045 PF05791 Bacillus haemolytic enterotoxin (HBL) HQJ03_015050 PF05791 Bacillus haemolytic enterotoxin (HBL) HQJ03_015065 PF12833 Helix-turn-helix domain HQJ03_015065 PF17853 GGDEF-like domain HQJ03_015075 PF00269 Small, acid-soluble spore proteins, alpha/beta type HQJ03_015080 PF01541 GIY-YIG catalytic domain HQJ03_015080 PF02151 UvrB/uvrC motif HQJ03_015080 PF08459 UvrC Helix-hairpin-helix N-terminal HQJ03_015080 PF12826 Helix-hairpin-helix motif HQJ03_015085 PF13520 Amino acid permease HQJ03_015090 PF03807 NADP oxidoreductase coenzyme F420-dependent HQJ03_015090 PF14748 Pyrroline-5-carboxylate reductase dimerisation HQJ03_015095 PF05504 Spore germination B3/ GerAC like, C-terminal HQJ03_015100 PF03845 Spore germination protein HQJ03_015105 PF03323 Bacillus/Clostridium GerA spore germination protein HQJ03_015110 PF08664 YcbB domain HQJ03_015110 PF00072 Response regulator receiver domain HQJ03_015115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQJ03_015120 PF04960 Glutaminase HQJ03_015125 PF01235 Sodium:alanine symporter family HQJ03_015135 PF00067 Cytochrome P450 HQJ03_015140 PF00144 Beta-lactamase HQJ03_015150 PF00149 Calcineurin-like phosphoesterase HQJ03_015150 PF17936 Bacterial Ig domain HQJ03_015150 PF02872 5'-nucleotidase, C-terminal domain HQJ03_015155 PF00561 alpha/beta hydrolase fold HQJ03_015160 PF00857 Isochorismatase family HQJ03_015175 PF01979 Amidohydrolase family HQJ03_015180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HQJ03_015180 PF03466 LysR substrate binding domain HQJ03_015185 PF01047 MarR family HQJ03_015190 PF01544 CorA-like Mg2+ transporter protein HQJ03_015210 PF12146 Serine aminopeptidase, S33 HQJ03_015210 PF13026 Protein of unknown function (DUF3887) HQJ03_015225 PF03073 TspO/MBR family HQJ03_015230 PF03441 FAD binding domain of DNA photolyase HQJ03_015230 PF00875 DNA photolyase HQJ03_015250 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) HQJ03_015255 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus HQJ03_015255 PF00361 Proton-conducting membrane transporter HQJ03_015260 PF10057 Uncharacterized conserved protein (DUF2294) HQJ03_015270 PF05504 Spore germination B3/ GerAC like, C-terminal HQJ03_015275 PF03323 Bacillus/Clostridium GerA spore germination protein HQJ03_015280 PF01522 Polysaccharide deacetylase HQJ03_015285 PF00583 Acetyltransferase (GNAT) family HQJ03_015290 PF01040 UbiA prenyltransferase family HQJ03_015300 PF12746 GNAT acetyltransferase HQJ03_015305 PF01451 Low molecular weight phosphotyrosine protein phosphatase HQJ03_015310 PF01758 Sodium Bile acid symporter family HQJ03_015315 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HQJ03_015320 PF01022 Bacterial regulatory protein, arsR family HQJ03_015330 PF01872 RibD C-terminal domain HQJ03_015335 PF07993 Male sterility protein HQJ03_015335 PF00550 Phosphopantetheine attachment site HQJ03_015340 PF18665 Tetracyclin repressor-like, C-terminal domain HQJ03_015340 PF00440 Bacterial regulatory proteins, tetR family HQJ03_015350 PF01037 Lrp/AsnC ligand binding domain HQJ03_015365 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HQJ03_015390 PF00440 Bacterial regulatory proteins, tetR family HQJ03_015400 PF00144 Beta-lactamase HQJ03_015405 PF00144 Beta-lactamase HQJ03_015410 PF08803 Putative mono-oxygenase ydhR HQJ03_015420 PF12802 MarR family HQJ03_015455 PF00486 Transcriptional regulatory protein, C terminal HQJ03_015455 PF00072 Response regulator receiver domain HQJ03_015460 PF00672 HAMP domain HQJ03_015460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQJ03_015460 PF00512 His Kinase A (phospho-acceptor) domain HQJ03_015490 PF00072 Response regulator receiver domain HQJ03_015490 PF00196 Bacterial regulatory proteins, luxR family HQJ03_015500 PF00005 ABC transporter HQJ03_015505 PF00512 His Kinase A (phospho-acceptor) domain HQJ03_015505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQJ03_015510 PF00072 Response regulator receiver domain HQJ03_015510 PF00486 Transcriptional regulatory protein, C terminal HQJ03_015530 PF00258 Flavodoxin HQJ03_015530 PF00067 Cytochrome P450 HQJ03_015530 PF00667 FAD binding domain HQJ03_015530 PF00175 Oxidoreductase NAD-binding domain HQJ03_015535 PF07690 Major Facilitator Superfamily HQJ03_015555 PF00291 Pyridoxal-phosphate dependent enzyme HQJ03_015565 PF01139 tRNA-splicing ligase RtcB HQJ03_015575 PF04072 Leucine carboxyl methyltransferase HQJ03_015590 PF00005 ABC transporter HQJ03_015595 PF02687 FtsX-like permease family HQJ03_015615 PF00512 His Kinase A (phospho-acceptor) domain HQJ03_015615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQJ03_015615 PF00672 HAMP domain HQJ03_015620 PF00486 Transcriptional regulatory protein, C terminal HQJ03_015620 PF00072 Response regulator receiver domain HQJ03_015625 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) HQJ03_015625 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 HQJ03_015655 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HQJ03_015655 PF01842 ACT domain HQJ03_015655 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HQJ03_015660 PF00266 Aminotransferase class-V HQJ03_015675 PF07883 Cupin domain HQJ03_015680 PF01497 Periplasmic binding protein HQJ03_015680 PF12833 Helix-turn-helix domain HQJ03_015685 PF01804 Penicillin amidase HQJ03_015695 PF01510 N-acetylmuramoyl-L-alanine amidase HQJ03_015695 PF01476 LysM domain HQJ03_015695 PF01471 Putative peptidoglycan binding domain HQJ03_015795 PF02557 D-alanyl-D-alanine carboxypeptidase HQJ03_015800 PF09587 Bacterial capsule synthesis protein PGA_cap HQJ03_015805 PF14044 NETI protein HQJ03_015810 PF07690 Major Facilitator Superfamily HQJ03_015820 PF12697 Alpha/beta hydrolase family HQJ03_015825 PF01047 MarR family HQJ03_015830 PF07690 Major Facilitator Superfamily HQJ03_015835 PF00144 Beta-lactamase HQJ03_015840 PF12679 ABC-2 family transporter protein HQJ03_015845 PF13732 Domain of unknown function (DUF4162) HQJ03_015845 PF00005 ABC transporter HQJ03_015850 PF13396 Phospholipase_D-nuclease N-terminal HQJ03_015865 PF02667 Short chain fatty acid transporter HQJ03_015875 PF02525 Flavodoxin-like fold HQJ03_015895 PF14256 YwiC-like protein HQJ03_015905 PF00005 ABC transporter HQJ03_015925 PF03737 Aldolase/RraA HQJ03_015930 PF03606 C4-dicarboxylate anaerobic carrier HQJ03_015935 PF04231 Endonuclease I HQJ03_015955 PF04073 Aminoacyl-tRNA editing domain HQJ03_015960 PF13393 Histidyl-tRNA synthetase HQJ03_015960 PF03129 Anticodon binding domain HQJ03_015975 PF01638 HxlR-like helix-turn-helix HQJ03_015980 PF00881 Nitroreductase family HQJ03_015990 PF00224 Pyruvate kinase, barrel domain HQJ03_015990 PF02887 Pyruvate kinase, alpha/beta domain HQJ03_015990 PF00391 PEP-utilising enzyme, mobile domain HQJ03_016020 PF00005 ABC transporter HQJ03_016045 PF13419 Haloacid dehalogenase-like hydrolase HQJ03_016050 PF13350 Tyrosine phosphatase family HQJ03_016070 PF00293 NUDIX domain HQJ03_016070 PF13344 Haloacid dehalogenase-like hydrolase HQJ03_016075 PF00579 tRNA synthetases class I (W and Y) HQJ03_016080 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase HQJ03_016080 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain HQJ03_016080 PF13288 DXP reductoisomerase C-terminal domain HQJ03_016085 PF01594 AI-2E family transporter HQJ03_016125 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) HQJ03_016135 PF03471 Transporter associated domain HQJ03_016135 PF00571 CBS domain HQJ03_016135 PF01595 Cyclin M transmembrane N-terminal domain HQJ03_016140 PF13411 MerR HTH family regulatory protein HQJ03_016150 PF00483 Nucleotidyl transferase HQJ03_016155 PF16363 GDP-mannose 4,6 dehydratase HQJ03_016160 PF08484 C-methyltransferase C-terminal domain HQJ03_016160 PF08421 Putative zinc binding domain HQJ03_016165 PF16363 GDP-mannose 4,6 dehydratase HQJ03_016180 PF00892 EamA-like transporter family HQJ03_016190 PF00805 Pentapeptide repeats (8 copies) HQJ03_016195 PF06906 Protein of unknown function (DUF1272) HQJ03_016200 PF10282 Lactonase, 7-bladed beta-propeller HQJ03_016205 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HQJ03_016205 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HQJ03_016210 PF02447 GntP family permease HQJ03_016215 PF00923 Transaldolase/Fructose-6-phosphate aldolase HQJ03_016220 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain HQJ03_016220 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HQJ03_016225 PF02780 Transketolase, C-terminal domain HQJ03_016225 PF02779 Transketolase, pyrimidine binding domain HQJ03_016225 PF00456 Transketolase, thiamine diphosphate binding domain HQJ03_016230 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain HQJ03_016230 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain HQJ03_016235 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain HQJ03_016235 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain HQJ03_016240 PF08240 Alcohol dehydrogenase GroES-like domain HQJ03_016240 PF00107 Zinc-binding dehydrogenase HQJ03_016245 PF00296 Luciferase-like monooxygenase HQJ03_016250 PF08659 KR domain HQJ03_016250 PF08240 Alcohol dehydrogenase GroES-like domain HQJ03_016250 PF16197 Ketoacyl-synthetase C-terminal extension HQJ03_016250 PF00550 Phosphopantetheine attachment site HQJ03_016250 PF00698 Acyl transferase domain HQJ03_016250 PF14765 Polyketide synthase dehydratase HQJ03_016250 PF02801 Beta-ketoacyl synthase, C-terminal domain HQJ03_016250 PF00109 Beta-ketoacyl synthase, N-terminal domain HQJ03_016255 PF00106 short chain dehydrogenase HQJ03_016260 PF02868 Thermolysin metallopeptidase, alpha-helical domain HQJ03_016260 PF01447 Thermolysin metallopeptidase, catalytic domain HQJ03_016260 PF07504 Fungalysin/Thermolysin Propeptide Motif HQJ03_016260 PF03413 Peptidase propeptide and YPEB domain HQJ03_016270 PF12729 Four helix bundle sensory module for signal transduction HQJ03_016270 PF00672 HAMP domain HQJ03_016270 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HQJ03_016275 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) HQJ03_016280 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HQJ03_016280 PF01872 RibD C-terminal domain HQJ03_016285 PF00925 GTP cyclohydrolase II HQJ03_016285 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase HQJ03_016290 PF01638 HxlR-like helix-turn-helix HQJ03_016305 PF00248 Aldo/keto reductase family HQJ03_016310 PF07690 Major Facilitator Superfamily HQJ03_016320 PF03928 Haem-degrading HQJ03_016335 PF08274 PhnA Zinc-Ribbon HQJ03_016335 PF03831 PhnA domain HQJ03_016340 PF01740 STAS domain HQJ03_016340 PF00916 Sulfate permease family HQJ03_016385 PF03960 ArsC family HQJ03_016390 PF01638 HxlR-like helix-turn-helix HQJ03_016395 PF00392 Bacterial regulatory proteins, gntR family HQJ03_016395 PF07702 UTRA domain HQJ03_016400 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HQJ03_016400 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HQJ03_016410 PF01638 HxlR-like helix-turn-helix HQJ03_016415 PF01638 HxlR-like helix-turn-helix HQJ03_016420 PF00248 Aldo/keto reductase family HQJ03_016465 PF02567 Phenazine biosynthesis-like protein HQJ03_016475 PF00501 AMP-binding enzyme HQJ03_016475 PF13193 AMP-binding enzyme C-terminal domain HQJ03_016480 PF02525 Flavodoxin-like fold HQJ03_016485 PF01638 HxlR-like helix-turn-helix HQJ03_016490 PF01022 Bacterial regulatory protein, arsR family HQJ03_016495 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain HQJ03_016495 PF01522 Polysaccharide deacetylase HQJ03_016500 PF12791 Anti-sigma factor N-terminus HQJ03_016505 PF04542 Sigma-70 region 2 HQJ03_016510 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 HQJ03_016510 PF00535 Glycosyl transferase family 2 HQJ03_016545 PF01061 ABC-2 type transporter HQJ03_016550 PF13732 Domain of unknown function (DUF4162) HQJ03_016550 PF00005 ABC transporter HQJ03_016565 PF03063 Prismane/CO dehydrogenase family HQJ03_016620 PF00753 Metallo-beta-lactamase superfamily HQJ03_016625 PF00324 Amino acid permease HQJ03_016630 PF07690 Major Facilitator Superfamily HQJ03_016655 PF02585 GlcNAc-PI de-N-acetylase HQJ03_016660 PF08830 Protein of unknown function (DUF1806) HQJ03_016665 PF03600 Citrate transporter HQJ03_016680 PF01497 Periplasmic binding protein HQJ03_016685 PF01032 FecCD transport family HQJ03_016690 PF01032 FecCD transport family HQJ03_016695 PF05675 Protein of unknown function (DUF817) HQJ03_016700 PF13170 Protein of unknown function (DUF4003) HQJ03_016715 PF13302 Acetyltransferase (GNAT) domain HQJ03_016720 PF10901 Protein of unknown function (DUF2690) HQJ03_016730 PF03466 LysR substrate binding domain HQJ03_016730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HQJ03_016735 PF08240 Alcohol dehydrogenase GroES-like domain HQJ03_016735 PF00107 Zinc-binding dehydrogenase HQJ03_016750 PF01713 Smr domain HQJ03_016750 PF00488 MutS domain V HQJ03_016755 PF09154 Domain of unknown function (DUF1939) HQJ03_016755 PF00128 Alpha amylase, catalytic domain HQJ03_016760 PF00797 N-acetyltransferase HQJ03_016765 PF08439 Oligopeptidase F HQJ03_016765 PF01432 Peptidase family M3 HQJ03_016770 PF04371 Porphyromonas-type peptidyl-arginine deiminase HQJ03_016775 PF07969 Amidohydrolase family HQJ03_016790 PF01062 Bestrophin, RFP-TM, chloride channel HQJ03_016795 PF06146 Phosphate-starvation-inducible E HQJ03_016800 PF04371 Porphyromonas-type peptidyl-arginine deiminase HQJ03_016805 PF00144 Beta-lactamase HQJ03_016820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HQJ03_016820 PF03466 LysR substrate binding domain HQJ03_016830 PF03009 Glycerophosphoryl diester phosphodiesterase family HQJ03_016835 PF01494 FAD binding domain HQJ03_016840 PF01022 Bacterial regulatory protein, arsR family HQJ03_016845 PF08240 Alcohol dehydrogenase GroES-like domain HQJ03_016845 PF00107 Zinc-binding dehydrogenase HQJ03_016850 PF02696 Uncharacterized ACR, YdiU/UPF0061 family HQJ03_016855 PF18801 response regulator aspartate phosphatase H, N terminal HQJ03_016870 PF02913 FAD linked oxidases, C-terminal domain HQJ03_016870 PF01565 FAD binding domain HQJ03_016905 PF00989 PAS fold HQJ03_016905 PF00512 His Kinase A (phospho-acceptor) domain HQJ03_016905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQJ03_016910 PF01752 Collagenase HQJ03_016910 PF08453 Peptidase family M9 N-terminal HQJ03_016910 PF18496 Collagenase G catalytic helper subdomain HQJ03_016915 PF02308 MgtC family HQJ03_016925 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HQJ03_016930 PF04294 VanW like protein HQJ03_016940 PF13037 Domain of unknown function (DUF3898) HQJ03_016940 PF13039 Protein of unknown function (DUF3900) HQJ03_016955 PF00313 'Cold-shock' DNA-binding domain HQJ03_016965 PF00258 Flavodoxin HQJ03_016975 PF00293 NUDIX domain HQJ03_016985 PF00132 Bacterial transferase hexapeptide (six repeats) HQJ03_016995 PF00106 short chain dehydrogenase HQJ03_017005 PF14698 Argininosuccinate lyase C-terminal HQJ03_017005 PF00206 Lyase HQJ03_017015 PF01156 Inosine-uridine preferring nucleoside hydrolase HQJ03_017020 PF00474 Sodium:solute symporter family HQJ03_017030 PF00171 Aldehyde dehydrogenase family HQJ03_017040 PF14151 YfhD-like protein HQJ03_017045 PF13243 Squalene-hopene cyclase C-terminal domain HQJ03_017045 PF13249 Squalene-hopene cyclase N-terminal domain HQJ03_017050 PF02681 Divergent PAP2 family HQJ03_017055 PF00892 EamA-like transporter family HQJ03_017060 PF06961 Protein of unknown function (DUF1294) HQJ03_017075 PF10609 NUBPL iron-transfer P-loop NTPase HQJ03_017085 PF02391 MoaE protein HQJ03_017090 PF03454 MoeA C-terminal region (domain IV) HQJ03_017090 PF00994 Probable molybdopterin binding domain HQJ03_017090 PF03453 MoeA N-terminal region (domain I and II) HQJ03_017095 PF00899 ThiF family HQJ03_017100 PF01226 Formate/nitrite transporter HQJ03_017105 PF06463 Molybdenum Cofactor Synthesis C HQJ03_017105 PF04055 Radical SAM superfamily HQJ03_017110 PF02634 FdhD/NarQ family HQJ03_017115 PF10057 Uncharacterized conserved protein (DUF2294) HQJ03_017120 PF07849 Protein of unknown function (DUF1641) HQJ03_017125 PF00037 4Fe-4S binding domain HQJ03_017125 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HQJ03_017125 PF00384 Molybdopterin oxidoreductase HQJ03_017125 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region HQJ03_017125 PF01568 Molydopterin dinucleotide binding domain HQJ03_017130 PF03323 Bacillus/Clostridium GerA spore germination protein HQJ03_017145 PF13520 Amino acid permease HQJ03_017180 PF08241 Methyltransferase domain HQJ03_017185 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HQJ03_017190 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HQJ03_017195 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HQJ03_017200 PF00375 Sodium:dicarboxylate symporter family HQJ03_017205 PF03816 Cell envelope-related transcriptional attenuator domain HQJ03_017215 PF04542 Sigma-70 region 2 HQJ03_017215 PF08281 Sigma-70, region 4 HQJ03_017225 PF00005 ABC transporter HQJ03_017225 PF13732 Domain of unknown function (DUF4162) HQJ03_017245 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HQJ03_017245 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HQJ03_017250 PF00521 DNA gyrase/topoisomerase IV, subunit A HQJ03_017250 PF03989 DNA gyrase C-terminal domain, beta-propeller HQJ03_017255 PF00204 DNA gyrase B HQJ03_017255 PF00986 DNA gyrase B subunit, carboxyl terminus HQJ03_017255 PF01751 Toprim domain HQJ03_017255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQJ03_017260 PF13380 CoA binding domain HQJ03_017265 PF13180 PDZ domain HQJ03_017270 PF00486 Transcriptional regulatory protein, C terminal HQJ03_017270 PF00072 Response regulator receiver domain HQJ03_017275 PF04055 Radical SAM superfamily HQJ03_017280 PF03477 ATP cone domain HQJ03_017280 PF13597 Anaerobic ribonucleoside-triphosphate reductase HQJ03_017285 PF02660 Glycerol-3-phosphate acyltransferase HQJ03_017290 PF01521 Iron-sulphur cluster biosynthesis HQJ03_017295 PF03061 Thioesterase superfamily HQJ03_017300 PF01476 LysM domain HQJ03_017300 PF00704 Glycosyl hydrolases family 18 HQJ03_017310 PF08177 Small acid-soluble spore protein N family HQJ03_017315 PF13040 Fur-regulated basic protein B HQJ03_017320 PF11490 DNA polymerase III polC-type N-terminus II HQJ03_017320 PF07733 Bacterial DNA polymerase III alpha NTPase domain HQJ03_017320 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HQJ03_017320 PF14579 Helix-hairpin-helix motif HQJ03_017320 PF02811 PHP domain HQJ03_017320 PF00929 Exonuclease HQJ03_017320 PF01336 OB-fold nucleic acid binding domain HQJ03_017325 PF00578 AhpC/TSA family HQJ03_017340 PF00664 ABC transporter transmembrane region HQJ03_017340 PF00005 ABC transporter HQJ03_017345 PF00694 Aconitase C-terminal domain HQJ03_017345 PF00330 Aconitase family (aconitate hydratase) HQJ03_017355 PF01522 Polysaccharide deacetylase HQJ03_017365 PF08179 Small acid-soluble spore protein P family HQJ03_017375 PF07690 Major Facilitator Superfamily HQJ03_017385 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HQJ03_017385 PF02272 DHHA1 domain HQJ03_017385 PF01411 tRNA synthetases class II (A) HQJ03_017390 PF00293 NUDIX domain HQJ03_017390 PF13344 Haloacid dehalogenase-like hydrolase HQJ03_017400 PF00108 Thiolase, N-terminal domain HQJ03_017400 PF02803 Thiolase, C-terminal domain HQJ03_017405 PF13193 AMP-binding enzyme C-terminal domain HQJ03_017405 PF00501 AMP-binding enzyme HQJ03_017410 PF02632 BioY family HQJ03_017415 PF13193 AMP-binding enzyme C-terminal domain HQJ03_017415 PF00501 AMP-binding enzyme HQJ03_017425 PF00005 ABC transporter HQJ03_017430 PF01381 Helix-turn-helix HQJ03_017445 PF05532 CsbD-like HQJ03_017465 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) HQJ03_017465 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 HQJ03_017475 PF13188 PAS domain HQJ03_017475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQJ03_017475 PF13426 PAS domain HQJ03_017475 PF00989 PAS fold HQJ03_017475 PF00512 His Kinase A (phospho-acceptor) domain HQJ03_017480 PF01738 Dienelactone hydrolase family HQJ03_017485 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HQJ03_017490 PF00474 Sodium:solute symporter family HQJ03_017495 PF01645 Conserved region in glutamate synthase HQJ03_017500 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HQJ03_017505 PF02559 CarD-like/TRCF domain HQJ03_017510 PF00491 Arginase family HQJ03_017515 PF01979 Amidohydrolase family HQJ03_017520 PF17392 Urocanase C-terminal domain HQJ03_017520 PF17391 Urocanase N-terminal domain HQJ03_017520 PF01175 Urocanase Rossmann-like domain HQJ03_017525 PF00221 Aromatic amino acid lyase HQJ03_017530 PF09021 HutP HQJ03_017555 PF11084 Protein of unknown function (DUF2621) HQJ03_017560 PF07301 Protein of unknown function (DUF1453) HQJ03_017565 PF02683 Cytochrome C biogenesis protein transmembrane region HQJ03_017575 PF07687 Peptidase dimerisation domain HQJ03_017575 PF01546 Peptidase family M20/M25/M40 HQJ03_017585 PF00005 ABC transporter HQJ03_017600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HQJ03_017600 PF03466 LysR substrate binding domain HQJ03_017605 PF03788 LrgA family HQJ03_017610 PF04172 LrgB-like family HQJ03_017615 PF00293 NUDIX domain HQJ03_017615 PF13344 Haloacid dehalogenase-like hydrolase HQJ03_017625 PF01925 Sulfite exporter TauE/SafE HQJ03_017645 PF01183 Glycosyl hydrolases family 25 HQJ03_017645 PF08239 Bacterial SH3 domain HQJ03_017650 PF00664 ABC transporter transmembrane region HQJ03_017650 PF00005 ABC transporter HQJ03_017655 PF00664 ABC transporter transmembrane region HQJ03_017655 PF00005 ABC transporter HQJ03_017660 PF03672 Uncharacterised protein family (UPF0154) HQJ03_017665 PF10747 Sporulation inhibitor of replication protein SirA HQJ03_017670 PF02779 Transketolase, pyrimidine binding domain HQJ03_017670 PF02780 Transketolase, C-terminal domain HQJ03_017670 PF00456 Transketolase, thiamine diphosphate binding domain HQJ03_017675 PF00528 Binding-protein-dependent transport system inner membrane component HQJ03_017680 PF00528 Binding-protein-dependent transport system inner membrane component HQJ03_017685 PF00005 ABC transporter HQJ03_017690 PF00497 Bacterial extracellular solute-binding proteins, family 3 HQJ03_017695 PF02872 5'-nucleotidase, C-terminal domain HQJ03_017695 PF00149 Calcineurin-like phosphoesterase HQJ03_017700 PF05979 Bacterial protein of unknown function (DUF896) HQJ03_017705 PF00239 Resolvase, N terminal domain HQJ03_017710 PF00717 Peptidase S24-like HQJ03_017710 PF01726 LexA DNA binding domain HQJ03_017725 PF03551 Transcriptional regulator PadR-like family HQJ03_017730 PF00120 Glutamine synthetase, catalytic domain HQJ03_017730 PF03951 Glutamine synthetase, beta-Grasp domain HQJ03_017735 PF13411 MerR HTH family regulatory protein HQJ03_017740 PF06838 Methionine gamma-lyase HQJ03_017745 PF16360 GTP-binding GTPase Middle Region HQJ03_017745 PF13167 GTP-binding GTPase N-terminal HQJ03_017745 PF01926 50S ribosome-binding GTPase HQJ03_017750 PF03458 UPF0126 domain HQJ03_017760 PF00004 ATPase family associated with various cellular activities (AAA) HQJ03_017760 PF17866 AAA lid domain HQJ03_017775 PF17209 Hfq protein HQJ03_017790 PF01476 LysM domain HQJ03_017790 PF06725 3D domain HQJ03_017795 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HQJ03_017795 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HQJ03_017800 PF00294 pfkB family carbohydrate kinase HQJ03_017805 PF00455 DeoR C terminal sensor domain HQJ03_017805 PF08220 DeoR-like helix-turn-helix domain HQJ03_017810 PF00465 Iron-containing alcohol dehydrogenase HQJ03_017815 PF04238 Protein of unknown function (DUF420) HQJ03_017825 PF00324 Amino acid permease HQJ03_017830 PF00704 Glycosyl hydrolases family 18 HQJ03_017830 PF00041 Fibronectin type III domain HQJ03_017835 PF00149 Calcineurin-like phosphoesterase HQJ03_017835 PF10518 TAT (twin-arginine translocation) pathway signal sequence HQJ03_017840 PF01226 Formate/nitrite transporter HQJ03_017845 PF00216 Bacterial DNA-binding protein HQJ03_017855 PF00403 Heavy-metal-associated domain HQJ03_017860 PF00403 Heavy-metal-associated domain HQJ03_017865 PF02583 Metal-sensitive transcriptional repressor HQJ03_017875 PF00756 Putative esterase HQJ03_017880 PF00005 ABC transporter HQJ03_017885 PF01032 FecCD transport family HQJ03_017890 PF01032 FecCD transport family HQJ03_017895 PF01497 Periplasmic binding protein HQJ03_017900 PF03372 Endonuclease/Exonuclease/phosphatase family HQJ03_017905 PF12833 Helix-turn-helix domain HQJ03_017905 PF02805 Metal binding domain of Ada HQJ03_017910 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain HQJ03_017910 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain HQJ03_017915 PF00730 HhH-GPD superfamily base excision DNA repair protein HQJ03_017915 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain HQJ03_017920 PF01546 Peptidase family M20/M25/M40 HQJ03_017920 PF07687 Peptidase dimerisation domain HQJ03_017935 PF00561 alpha/beta hydrolase fold HQJ03_017940 PF00563 EAL domain HQJ03_017940 PF00990 Diguanylate cyclase, GGDEF domain HQJ03_017940 PF03707 Bacterial signalling protein N terminal repeat HQJ03_017945 PF04101 Glycosyltransferase family 28 C-terminal domain HQJ03_017945 PF03033 Glycosyltransferase family 28 N-terminal domain HQJ03_017955 PF16363 GDP-mannose 4,6 dehydratase HQJ03_017960 PF02719 Polysaccharide biosynthesis protein HQJ03_017960 PF08485 Polysaccharide biosynthesis protein C-terminal HQJ03_017975 PF10787 Uncharacterised protein from bacillus cereus group HQJ03_017980 PF04172 LrgB-like family HQJ03_017985 PF03788 LrgA family HQJ03_017990 PF00155 Aminotransferase class I and II HQJ03_017990 PF00392 Bacterial regulatory proteins, gntR family HQJ03_018000 PF00392 Bacterial regulatory proteins, gntR family HQJ03_018000 PF07702 UTRA domain HQJ03_018005 PF00232 Glycosyl hydrolase family 1 HQJ03_018010 PF00388 Phosphatidylinositol-specific phospholipase C, X domain HQJ03_018015 PF00082 Subtilase family HQJ03_018020 PF07486 Cell Wall Hydrolase HQJ03_018030 PF00884 Sulfatase HQJ03_018035 PF00350 Dynamin family HQJ03_018045 PF01119 DNA mismatch repair protein, C-terminal domain HQJ03_018045 PF08676 MutL C terminal dimerisation domain HQJ03_018050 PF01624 MutS domain I HQJ03_018050 PF05188 MutS domain II HQJ03_018050 PF05192 MutS domain III HQJ03_018050 PF05190 MutS family domain IV HQJ03_018050 PF00488 MutS domain V HQJ03_018055 PF10628 Outer spore coat protein E (CotE) HQJ03_018060 PF06133 Control of competence regulator ComK, YlbF/YmcA HQJ03_018065 PF00919 Uncharacterized protein family UPF0004 HQJ03_018065 PF01938 TRAM domain HQJ03_018065 PF04055 Radical SAM superfamily HQJ03_018070 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HQJ03_018075 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II HQJ03_018075 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase HQJ03_018075 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg HQJ03_018080 PF01244 Membrane dipeptidase (Peptidase family M19) HQJ03_018085 PF04232 Stage V sporulation protein S (SpoVS) HQJ03_018090 PF13277 YmdB-like protein HQJ03_018095 PF01966 HD domain HQJ03_018095 PF00013 KH domain HQJ03_018095 PF12072 Domain of unknown function (DUF3552) HQJ03_018100 PF00154 recA bacterial DNA recombination protein HQJ03_018105 PF18146 Damage-inducible protein CinA KH domain HQJ03_018105 PF02464 Competence-damaged protein HQJ03_018105 PF00994 Probable molybdopterin binding domain HQJ03_018110 PF01066 CDP-alcohol phosphatidyltransferase HQJ03_018115 PF13464 Domain of unknown function (DUF4115) HQJ03_018120 PF11868 Protein of unknown function (DUF3388) HQJ03_018125 PF11588 Protein of unknown function (DUF3243) HQJ03_018135 PF00675 Insulinase (Peptidase family M16) HQJ03_018135 PF05193 Peptidase M16 inactive domain HQJ03_018140 PF05193 Peptidase M16 inactive domain HQJ03_018145 PF02653 Branched-chain amino acid transport system / permease component HQJ03_018150 PF02653 Branched-chain amino acid transport system / permease component HQJ03_018155 PF00005 ABC transporter HQJ03_018160 PF02608 ABC transporter substrate-binding protein PnrA-like HQJ03_018165 PF00392 Bacterial regulatory proteins, gntR family HQJ03_018165 PF07702 UTRA domain HQJ03_018175 PF01580 FtsK/SpoIIIE family HQJ03_018175 PF09397 Ftsk gamma domain HQJ03_018175 PF17854 FtsK alpha domain HQJ03_018180 PF14035 YlzJ-like protein HQJ03_018185 PF00574 Clp protease HQJ03_018190 PF17770 Ribonuclease J C-terminal domain HQJ03_018190 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain HQJ03_018190 PF00753 Metallo-beta-lactamase superfamily HQJ03_018195 PF00701 Dihydrodipicolinate synthetase family HQJ03_018200 PF13840 ACT domain HQJ03_018200 PF00696 Amino acid kinase family HQJ03_018205 PF01118 Semialdehyde dehydrogenase, NAD binding domain HQJ03_018205 PF02774 Semialdehyde dehydrogenase, dimerisation domain HQJ03_018210 PF02441 Flavoprotein HQJ03_018215 PF01262 Alanine dehydrogenase/PNT, C-terminal domain HQJ03_018215 PF16924 Dipicolinate synthase subunit A N-terminal domain HQJ03_018220 PF05239 PRC-barrel domain HQJ03_018225 PF00675 Insulinase (Peptidase family M16) HQJ03_018225 PF05193 Peptidase M16 inactive domain HQJ03_018230 PF01522 Polysaccharide deacetylase HQJ03_018235 PF00575 S1 RNA binding domain HQJ03_018235 PF03725 3' exoribonuclease family, domain 2 HQJ03_018235 PF01138 3' exoribonuclease family, domain 1 HQJ03_018235 PF00013 KH domain HQJ03_018235 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain HQJ03_018240 PF00312 Ribosomal protein S15 HQJ03_018245 PF06574 FAD synthetase HQJ03_018245 PF01687 Riboflavin kinase HQJ03_018250 PF16198 tRNA pseudouridylate synthase B C-terminal domain HQJ03_018250 PF01509 TruB family pseudouridylate synthase (N terminal domain) HQJ03_018255 PF02033 Ribosome-binding factor A HQJ03_018260 PF04456 Protein of unknown function (DUF503) HQJ03_018265 PF00009 Elongation factor Tu GTP binding domain HQJ03_018265 PF04760 Translation initiation factor IF-2, N-terminal region HQJ03_018265 PF11987 Translation-initiation factor 2 HQJ03_018270 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family HQJ03_018275 PF04296 Protein of unknown function (DUF448) HQJ03_018280 PF13184 NusA-like KH domain HQJ03_018280 PF08529 NusA N-terminal domain HQJ03_018280 PF00575 S1 RNA binding domain HQJ03_018285 PF02576 RimP N-terminal domain HQJ03_018285 PF17384 RimP C-terminal SH3 domain HQJ03_018290 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HQJ03_018290 PF02811 PHP domain HQJ03_018290 PF07733 Bacterial DNA polymerase III alpha NTPase domain HQJ03_018290 PF11490 DNA polymerase III polC-type N-terminus II HQJ03_018290 PF14579 Helix-hairpin-helix motif HQJ03_018290 PF00929 Exonuclease HQJ03_018290 PF14480 DNA polymerase III polC-type N-terminus I HQJ03_018295 PF04073 Aminoacyl-tRNA editing domain HQJ03_018295 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HQJ03_018295 PF03129 Anticodon binding domain HQJ03_018300 PF17820 PDZ domain HQJ03_018300 PF02163 Peptidase family M50 HQJ03_018305 PF13288 DXP reductoisomerase C-terminal domain HQJ03_018305 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase HQJ03_018305 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain HQJ03_018315 PF01255 Putative undecaprenyl diphosphate synthase HQJ03_018320 PF01765 Ribosome recycling factor HQJ03_018325 PF00696 Amino acid kinase family HQJ03_018330 PF00889 Elongation factor TS HQJ03_018335 PF00318 Ribosomal protein S2 HQJ03_018340 PF08222 CodY helix-turn-helix domain HQJ03_018340 PF06018 CodY GAF-like domain HQJ03_018345 PF00004 ATPase family associated with various cellular activities (AAA) HQJ03_018345 PF07724 AAA domain (Cdc48 subfamily) HQJ03_018345 PF10431 C-terminal, D2-small domain, of ClpB protein HQJ03_018350 PF00227 Proteasome subunit HQJ03_018355 PF02899 Phage integrase, N-terminal SAM-like domain HQJ03_018355 PF00589 Phage integrase family HQJ03_018360 PF01134 Glucose inhibited division protein A HQJ03_018365 PF01396 Topoisomerase DNA binding C4 zinc finger HQJ03_018365 PF01131 DNA topoisomerase HQJ03_018365 PF01751 Toprim domain HQJ03_018370 PF02481 DNA recombination-mediator protein A HQJ03_018375 PF00549 CoA-ligase HQJ03_018375 PF02629 CoA binding domain HQJ03_018380 PF00549 CoA-ligase HQJ03_018380 PF08442 ATP-grasp domain HQJ03_018385 PF01351 Ribonuclease HII HQJ03_018390 PF01926 50S ribosome-binding GTPase HQJ03_018395 PF10502 Signal peptidase, peptidase S26 HQJ03_018400 PF01245 Ribosomal protein L19 HQJ03_018405 PF01746 tRNA (Guanine-1)-methyltransferase HQJ03_018410 PF05239 PRC-barrel domain HQJ03_018410 PF01782 RimM N-terminal domain HQJ03_018420 PF00886 Ribosomal protein S16 HQJ03_018425 PF00448 SRP54-type protein, GTPase domain HQJ03_018425 PF02881 SRP54-type protein, helical bundle domain HQJ03_018425 PF02978 Signal peptide binding domain HQJ03_018430 PF04297 Putative helix-turn-helix protein, YlxM / p13 like HQJ03_018435 PF00448 SRP54-type protein, GTPase domain HQJ03_018435 PF02881 SRP54-type protein, helical bundle domain HQJ03_018440 PF02463 RecF/RecN/SMC N terminal domain HQJ03_018440 PF06470 SMC proteins Flexible Hinge Domain HQJ03_018445 PF00035 Double-stranded RNA binding motif HQJ03_018445 PF14622 Ribonuclease-III-like HQJ03_018450 PF00550 Phosphopantetheine attachment site HQJ03_018460 PF00698 Acyl transferase domain HQJ03_018465 PF02504 Fatty acid synthesis protein HQJ03_018470 PF03061 Thioesterase superfamily HQJ03_018475 PF00271 Helicase conserved C-terminal domain HQJ03_018475 PF17191 RecG wedge domain HQJ03_018475 PF00270 DEAD/DEAH box helicase HQJ03_018480 PF13684 Dihydroxyacetone kinase family HQJ03_018480 PF02734 DAK2 domain HQJ03_018485 PF03780 Asp23 family, cell envelope-related function HQJ03_018490 PF00830 Ribosomal L28 family HQJ03_018495 PF08183 Stage V sporulation protein family HQJ03_018500 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain HQJ03_018500 PF04263 Thiamin pyrophosphokinase, catalytic domain HQJ03_018505 PF00834 Ribulose-phosphate 3 epimerase family HQJ03_018510 PF03193 RsgA GTPase HQJ03_018510 PF16745 RsgA N-terminal domain HQJ03_018515 PF00069 Protein kinase domain HQJ03_018515 PF03793 PASTA domain HQJ03_018525 PF04055 Radical SAM superfamily HQJ03_018530 PF01029 NusB family HQJ03_018530 PF01189 16S rRNA methyltransferase RsmB/F HQJ03_018535 PF00551 Formyl transferase HQJ03_018535 PF02911 Formyl transferase, C-terminal domain HQJ03_018540 PF01327 Polypeptide deformylase HQJ03_018545 PF17764 3′ DNA-binding domain (3′BD) HQJ03_018545 PF00271 Helicase conserved C-terminal domain HQJ03_018545 PF18074 Primosomal protein N C-terminal domain HQJ03_018545 PF18319 PriA DNA helicase Cys-rich region (CRR) domain HQJ03_018545 PF04851 Type III restriction enzyme, res subunit HQJ03_018550 PF04127 DNA / pantothenate metabolism flavoprotein HQJ03_018550 PF02441 Flavoprotein HQJ03_018555 PF01192 RNA polymerase Rpb6 HQJ03_018560 PF00625 Guanylate kinase HQJ03_018565 PF04025 Domain of unknown function (DUF370) HQJ03_018570 PF08340 Domain of unknown function (DUF1732) HQJ03_018570 PF03755 YicC-like family, N-terminal region HQJ03_018575 PF00690 Cation transporter/ATPase, N-terminus HQJ03_018575 PF00689 Cation transporting ATPase, C-terminus HQJ03_018580 PF05670 NFACT protein RNA binding domain HQJ03_018585 PF00557 Metallopeptidase family M24 HQJ03_018585 PF01321 Creatinase/Prolidase N-terminal domain HQJ03_018605 PF13419 Haloacid dehalogenase-like hydrolase HQJ03_018610 PF00156 Phosphoribosyl transferase domain HQJ03_018615 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family HQJ03_018620 PF01180 Dihydroorotate dehydrogenase HQJ03_018625 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B HQJ03_018630 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain HQJ03_018630 PF02142 MGS-like domain HQJ03_018630 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HQJ03_018635 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain HQJ03_018635 PF00117 Glutamine amidotransferase class-I HQJ03_018640 PF01979 Amidohydrolase family HQJ03_018645 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HQJ03_018645 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HQJ03_018650 PF00860 Permease family HQJ03_018655 PF00156 Phosphoribosyl transferase domain HQJ03_018660 PF01479 S4 domain HQJ03_018660 PF00849 RNA pseudouridylate synthase HQJ03_018665 PF01252 Signal peptidase (SPase) II HQJ03_018675 PF06827 Zinc finger found in FPG and IleRS HQJ03_018675 PF00133 tRNA synthetases class I (I, L, M and V) HQJ03_018675 PF08264 Anticodon-binding domain of tRNA HQJ03_018680 PF05103 DivIVA protein HQJ03_018685 PF17774 Putative RNA-binding domain in YlmH HQJ03_018685 PF01479 S4 domain HQJ03_018690 PF02325 YGGT family HQJ03_018695 PF04472 Cell division protein SepF HQJ03_018700 PF01168 Alanine racemase, N-terminal domain HQJ03_018705 PF02578 Multi-copper polyphenol oxidoreductase laccase HQJ03_018710 PF05239 PRC-barrel domain HQJ03_018715 PF04542 Sigma-70 region 2 HQJ03_018715 PF04539 Sigma-70 region 3 HQJ03_018715 PF04545 Sigma-70, region 4 HQJ03_018720 PF04542 Sigma-70 region 2 HQJ03_018720 PF04545 Sigma-70, region 4 HQJ03_018725 PF03419 Sporulation factor SpoIIGA HQJ03_018730 PF00091 Tubulin/FtsZ family, GTPase domain HQJ03_018730 PF12327 FtsZ family, C-terminal domain HQJ03_018735 PF02491 SHS2 domain inserted in FTSA HQJ03_018740 PF08478 POTRA domain, FtsQ-type HQJ03_018740 PF03799 Cell division protein FtsQ HQJ03_018745 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain HQJ03_018745 PF01565 FAD binding domain HQJ03_018750 PF03033 Glycosyltransferase family 28 N-terminal domain HQJ03_018750 PF04101 Glycosyltransferase family 28 C-terminal domain HQJ03_018755 PF01098 Cell cycle protein HQJ03_018760 PF08245 Mur ligase middle domain HQJ03_018760 PF02875 Mur ligase family, glutamate ligase domain HQJ03_018765 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 HQJ03_018765 PF00953 Glycosyl transferase family 4 HQJ03_018770 PF01225 Mur ligase family, catalytic domain HQJ03_018770 PF02875 Mur ligase family, glutamate ligase domain HQJ03_018770 PF08245 Mur ligase middle domain HQJ03_018775 PF03793 PASTA domain HQJ03_018775 PF03717 Penicillin-binding Protein dimerisation domain HQJ03_018775 PF00905 Penicillin binding protein transpeptidase domain HQJ03_018780 PF00905 Penicillin binding protein transpeptidase domain HQJ03_018780 PF03717 Penicillin-binding Protein dimerisation domain HQJ03_018780 PF03793 PASTA domain HQJ03_018785 PF04977 Septum formation initiator HQJ03_018790 PF01795 MraW methylase family HQJ03_018795 PF10079 Bacillithiol biosynthesis BshC HQJ03_018800 PF02558 Ketopantoate reductase PanE/ApbA HQJ03_018800 PF08546 Ketopantoate reductase PanE/ApbA C terminal HQJ03_018805 PF00583 Acetyltransferase (GNAT) family HQJ03_018815 PF01783 Ribosomal L32p protein family HQJ03_018820 PF02620 Large ribosomal RNA subunit accumulation protein YceD HQJ03_018825 PF05636 HIGH Nucleotidyl Transferase HQJ03_018830 PF05362 Lon protease (S16) C-terminal proteolytic domain HQJ03_018830 PF13180 PDZ domain HQJ03_018835 PF01734 Patatin-like phospholipase HQJ03_018840 PF07670 Nucleoside recognition HQJ03_018845 PF01467 Cytidylyltransferase-like HQJ03_018860 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) HQJ03_018865 PF06133 Control of competence regulator ComK, YlbF/YmcA HQJ03_018870 PF00300 Histidine phosphatase superfamily (branch 1) HQJ03_018875 PF14003 YlbE-like protein HQJ03_018880 PF14071 Putative coat protein HQJ03_018885 PF14504 CAP-associated N-terminal HQJ03_018885 PF00188 Cysteine-rich secretory protein family HQJ03_018890 PF08868 YugN-like family HQJ03_018895 PF00795 Carbon-nitrogen hydrolase HQJ03_018900 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) HQJ03_018905 PF03626 Prokaryotic Cytochrome C oxidase subunit IV HQJ03_018910 PF00510 Cytochrome c oxidase subunit III HQJ03_018915 PF00115 Cytochrome C and Quinol oxidase polypeptide I HQJ03_018920 PF00116 Cytochrome C oxidase subunit II, periplasmic domain HQJ03_018920 PF00034 Cytochrome c HQJ03_018920 PF02790 Cytochrome C oxidase subunit II, transmembrane domain HQJ03_018925 PF01040 UbiA prenyltransferase family HQJ03_018930 PF02628 Cytochrome oxidase assembly protein HQJ03_018935 PF02436 Conserved carboxylase domain HQJ03_018935 PF00682 HMGL-like HQJ03_018935 PF00364 Biotin-requiring enzyme HQJ03_018935 PF00289 Biotin carboxylase, N-terminal domain HQJ03_018935 PF02785 Biotin carboxylase C-terminal domain HQJ03_018935 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HQJ03_018940 PF01098 Cell cycle protein HQJ03_018945 PF07408 Protein of unknown function (DUF1507) HQJ03_018955 PF13638 PIN domain HQJ03_018955 PF02562 PhoH-like protein HQJ03_018965 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) HQJ03_018975 PF14036 YlaH-like protein HQJ03_018980 PF00679 Elongation factor G C-terminus HQJ03_018980 PF03144 Elongation factor Tu domain 2 HQJ03_018980 PF14492 Elongation Factor G, domain II HQJ03_018980 PF00009 Elongation factor Tu GTP binding domain HQJ03_018990 PF00459 Inositol monophosphatase family HQJ03_019000 PF06335 Protein of unknown function (DUF1054) HQJ03_019005 PF05256 Uncharacterised protein family (UPF0223) HQJ03_019010 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain HQJ03_019010 PF01276 Orn/Lys/Arg decarboxylase, major domain HQJ03_019050 PF07992 Pyridine nucleotide-disulphide oxidoreductase HQJ03_019050 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HQJ03_019055 PF02817 e3 binding domain HQJ03_019055 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HQJ03_019055 PF00364 Biotin-requiring enzyme HQJ03_019060 PF02780 Transketolase, C-terminal domain HQJ03_019060 PF02779 Transketolase, pyrimidine binding domain HQJ03_019065 PF00676 Dehydrogenase E1 component HQJ03_019075 PF01327 Polypeptide deformylase HQJ03_019085 PF07288 Protein of unknown function (DUF1447) HQJ03_019090 PF17770 Ribonuclease J C-terminal domain HQJ03_019090 PF00753 Metallo-beta-lactamase superfamily HQJ03_019090 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain HQJ03_019095 PF02254 TrkA-N domain HQJ03_019095 PF02080 TrkA-C domain HQJ03_019105 PF01546 Peptidase family M20/M25/M40 HQJ03_019105 PF07687 Peptidase dimerisation domain HQJ03_019110 PF14602 Hexapeptide repeat of succinyl-transferase HQJ03_019110 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal HQJ03_019110 PF00132 Bacterial transferase hexapeptide (six repeats) HQJ03_019115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HQJ03_019115 PF03466 LysR substrate binding domain HQJ03_019130 PF04308 Ribonuclease H-like HQJ03_019140 PF08796 Protein of unknown function (DUF1797) HQJ03_019155 PF00563 EAL domain HQJ03_019155 PF10388 EAL-domain associated signalling protein domain HQJ03_019165 PF10518 TAT (twin-arginine translocation) pathway signal sequence HQJ03_019165 PF00149 Calcineurin-like phosphoesterase HQJ03_019175 PF13090 Polyphosphate kinase C-terminal domain 2 HQJ03_019175 PF17941 Polyphosphate kinase C-terminal domain 1 HQJ03_019175 PF13089 Polyphosphate kinase N-terminal domain HQJ03_019175 PF02503 Polyphosphate kinase middle domain HQJ03_019180 PF02541 Ppx/GppA phosphatase family HQJ03_019185 PF14177 YkyB-like protein HQJ03_019210 PF07690 Major Facilitator Superfamily HQJ03_019220 PF01717 Cobalamin-independent synthase, Catalytic domain HQJ03_019220 PF08267 Cobalamin-independent synthase, N-terminal domain HQJ03_019230 PF14040 Deoxyribonuclease NucA/NucB HQJ03_019240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQJ03_019240 PF00512 His Kinase A (phospho-acceptor) domain HQJ03_019250 PF00155 Aminotransferase class I and II HQJ03_019255 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family HQJ03_019255 PF00356 Bacterial regulatory proteins, lacI family HQJ03_019260 PF00528 Binding-protein-dependent transport system inner membrane component HQJ03_019265 PF00528 Binding-protein-dependent transport system inner membrane component HQJ03_019270 PF13416 Bacterial extracellular solute-binding protein HQJ03_019275 PF02903 Alpha amylase, N-terminal ig-like domain HQJ03_019275 PF16657 Maltogenic Amylase, C-terminal domain HQJ03_019275 PF00128 Alpha amylase, catalytic domain HQJ03_019280 PF16657 Maltogenic Amylase, C-terminal domain HQJ03_019280 PF00128 Alpha amylase, catalytic domain HQJ03_019285 PF03459 TOBE domain HQJ03_019285 PF00005 ABC transporter HQJ03_019285 PF17912 MalK OB fold domain HQJ03_019325 PF00108 Thiolase, N-terminal domain HQJ03_019325 PF02803 Thiolase, C-terminal domain HQJ03_019330 PF00293 NUDIX domain HQJ03_019360 PF03551 Transcriptional regulator PadR-like family HQJ03_019375 PF01008 Initiation factor 2 subunit family HQJ03_019380 PF01636 Phosphotransferase enzyme family HQJ03_019385 PF00795 Carbon-nitrogen hydrolase HQJ03_019390 PF00155 Aminotransferase class I and II HQJ03_019395 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain HQJ03_019395 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain HQJ03_019405 PF00596 Class II Aldolase and Adducin N-terminal domain HQJ03_019410 PF03079 ARD/ARD' family HQJ03_019425 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase HQJ03_019425 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HQJ03_019430 PF00144 Beta-lactamase HQJ03_019435 PF08448 PAS fold HQJ03_019435 PF00990 Diguanylate cyclase, GGDEF domain HQJ03_019440 PF00881 Nitroreductase family HQJ03_019455 PF00391 PEP-utilising enzyme, mobile domain HQJ03_019455 PF05524 PEP-utilising enzyme, N-terminal HQJ03_019455 PF02896 PEP-utilising enzyme, TIM barrel domain HQJ03_019460 PF00381 PTS HPr component phosphorylation site HQJ03_019465 PF00367 phosphotransferase system, EIIB HQJ03_019465 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 HQJ03_019465 PF02378 Phosphotransferase system, EIIC HQJ03_019470 PF00874 PRD domain HQJ03_019470 PF03123 CAT RNA binding domain HQJ03_019480 PF00392 Bacterial regulatory proteins, gntR family HQJ03_019480 PF07702 UTRA domain HQJ03_019485 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase HQJ03_019490 PF01979 Amidohydrolase family HQJ03_019500 PF04079 Segregation and condensation complex subunit ScpB HQJ03_019505 PF02616 Segregation and condensation protein ScpA HQJ03_019515 PF03745 Domain of unknown function (DUF309) HQJ03_019520 PF00583 Acetyltransferase (GNAT) family HQJ03_019525 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD HQJ03_019530 PF06207 Protein of unknown function (DUF1002) HQJ03_019540 PF03323 Bacillus/Clostridium GerA spore germination protein HQJ03_019545 PF14097 Stage V sporulation protein AE1 HQJ03_019550 PF03862 SpoVAC/SpoVAEB sporulation membrane protein HQJ03_019555 PF07451 Stage V sporulation protein AD (SpoVAD) HQJ03_019560 PF03862 SpoVAC/SpoVAEB sporulation membrane protein HQJ03_019565 PF13782 Stage V sporulation protein AB HQJ03_019570 PF12164 Stage V sporulation protein AA HQJ03_019580 PF00209 Sodium:neurotransmitter symporter family HQJ03_019585 PF04545 Sigma-70, region 4 HQJ03_019585 PF04539 Sigma-70 region 3 HQJ03_019585 PF04542 Sigma-70 region 2 HQJ03_019590 PF13581 Histidine kinase-like ATPase domain HQJ03_019595 PF01740 STAS domain HQJ03_019600 PF07943 Penicillin-binding protein 5, C-terminal domain HQJ03_019600 PF00768 D-alanyl-D-alanine carboxypeptidase HQJ03_019605 PF00392 Bacterial regulatory proteins, gntR family HQJ03_019610 PF00005 ABC transporter HQJ03_019630 PF01047 MarR family HQJ03_019640 PF00860 Permease family HQJ03_019645 PF01544 CorA-like Mg2+ transporter protein HQJ03_019650 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain HQJ03_019650 PF00591 Glycosyl transferase family, a/b domain HQJ03_019650 PF02885 Glycosyl transferase family, helical bundle domain HQJ03_019655 PF01048 Phosphorylase superfamily HQJ03_019660 PF01676 Metalloenzyme superfamily HQJ03_019665 PF13115 YtkA-like HQJ03_019670 PF02899 Phage integrase, N-terminal SAM-like domain HQJ03_019670 PF00589 Phage integrase family HQJ03_019675 PF14004 Protein of unknown function (DUF4227) HQJ03_019680 PF01475 Ferric uptake regulator family HQJ03_019685 PF01944 Stage II sporulation protein M HQJ03_019695 PF00293 NUDIX domain HQJ03_019700 PF13072 Mother cell inhibitor of FtsZ HQJ03_019705 PF00248 Aldo/keto reductase family HQJ03_019710 PF00248 Aldo/keto reductase family HQJ03_019715 PF13673 Acetyltransferase (GNAT) domain HQJ03_019715 PF04229 GrpB protein HQJ03_019725 PF02872 5'-nucleotidase, C-terminal domain HQJ03_019725 PF00746 LPXTG cell wall anchor motif HQJ03_019725 PF00149 Calcineurin-like phosphoesterase HQJ03_019725 PF00565 Staphylococcal nuclease homologue HQJ03_019735 PF12146 Serine aminopeptidase, S33 HQJ03_019740 PF13726 Na+-H+ antiporter family HQJ03_019740 PF03553 Na+/H+ antiporter family HQJ03_019745 PF00356 Bacterial regulatory proteins, lacI family HQJ03_019750 PF00583 Acetyltransferase (GNAT) family HQJ03_019755 PF12146 Serine aminopeptidase, S33 HQJ03_019760 PF10827 Protein of unknown function (DUF2552) HQJ03_019770 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HQJ03_019770 PF01872 RibD C-terminal domain HQJ03_019775 PF00677 Lumazine binding domain HQJ03_019780 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase HQJ03_019780 PF00925 GTP cyclohydrolase II HQJ03_019785 PF00885 6,7-dimethyl-8-ribityllumazine synthase HQJ03_019795 PF06968 Biotin and Thiamin Synthesis associated domain HQJ03_019795 PF04055 Radical SAM superfamily HQJ03_019800 PF13847 Methyltransferase domain HQJ03_019805 PF12697 Alpha/beta hydrolase family HQJ03_019805 PF08241 Methyltransferase domain HQJ03_019810 PF00155 Aminotransferase class I and II HQJ03_019820 PF00202 Aminotransferase class-III HQJ03_019830 PF03553 Na+/H+ antiporter family HQJ03_019835 PF00149 Calcineurin-like phosphoesterase HQJ03_019835 PF02872 5'-nucleotidase, C-terminal domain HQJ03_019845 PF01037 Lrp/AsnC ligand binding domain HQJ03_019845 PF13404 AsnC-type helix-turn-helix domain HQJ03_019860 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HQJ03_019860 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HQJ03_019865 PF00202 Aminotransferase class-III HQJ03_019870 PF00696 Amino acid kinase family HQJ03_019875 PF01960 ArgJ family HQJ03_019880 PF01118 Semialdehyde dehydrogenase, NAD binding domain HQJ03_019880 PF02774 Semialdehyde dehydrogenase, dimerisation domain HQJ03_019890 PF00106 short chain dehydrogenase HQJ03_019895 PF00753 Metallo-beta-lactamase superfamily HQJ03_019900 PF03807 NADP oxidoreductase coenzyme F420-dependent HQJ03_019900 PF14748 Pyrroline-5-carboxylate reductase dimerisation HQJ03_019905 PF03313 Serine dehydratase alpha chain HQJ03_019910 PF01842 ACT domain HQJ03_019910 PF03315 Serine dehydratase beta chain HQJ03_019920 PF00753 Metallo-beta-lactamase superfamily HQJ03_019920 PF12706 Beta-lactamase superfamily domain HQJ03_019935 PF00689 Cation transporting ATPase, C-terminus HQJ03_019935 PF00690 Cation transporter/ATPase, N-terminus HQJ03_019940 PF02308 MgtC family HQJ03_019945 PF00817 impB/mucB/samB family HQJ03_019945 PF11799 impB/mucB/samB family C-terminal domain HQJ03_019945 PF11798 IMS family HHH motif HQJ03_019950 PF07687 Peptidase dimerisation domain HQJ03_019950 PF01546 Peptidase family M20/M25/M40 HQJ03_019955 PF13302 Acetyltransferase (GNAT) domain HQJ03_019970 PF03734 L,D-transpeptidase catalytic domain HQJ03_019975 PF06081 Aromatic acid exporter family member 1 HQJ03_019975 PF11728 Putative aromatic acid exporter C-terminal domain HQJ03_019980 PF00005 ABC transporter HQJ03_019985 PF00528 Binding-protein-dependent transport system inner membrane component HQJ03_019990 PF00497 Bacterial extracellular solute-binding proteins, family 3 HQJ03_019995 PF06491 Disulphide isomerase HQJ03_020000 PF11208 Protein of unknown function (DUF2992) HQJ03_020005 PF00293 NUDIX domain HQJ03_020005 PF09297 NADH pyrophosphatase zinc ribbon domain HQJ03_020010 PF04239 Protein of unknown function (DUF421) HQJ03_020015 PF01098 Cell cycle protein HQJ03_020020 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HQJ03_020020 PF00364 Biotin-requiring enzyme HQJ03_020020 PF02817 e3 binding domain HQJ03_020025 PF02780 Transketolase, C-terminal domain HQJ03_020025 PF02779 Transketolase, pyrimidine binding domain HQJ03_020030 PF00676 Dehydrogenase E1 component HQJ03_020035 PF07992 Pyridine nucleotide-disulphide oxidoreductase HQJ03_020035 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HQJ03_020040 PF00871 Acetokinase family HQJ03_020045 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase HQJ03_020045 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain HQJ03_020050 PF01515 Phosphate acetyl/butaryl transferase HQJ03_020055 PF00989 PAS fold HQJ03_020055 PF02954 Bacterial regulatory protein, Fis family HQJ03_020055 PF00158 Sigma-54 interaction domain HQJ03_020065 PF03009 Glycerophosphoryl diester phosphodiesterase family HQJ03_020070 PF14174 YycC-like protein HQJ03_020080 PF00072 Response regulator receiver domain HQJ03_020080 PF08769 Sporulation initiation factor Spo0A C terminal HQJ03_020085 PF17820 PDZ domain HQJ03_020085 PF05580 SpoIVB peptidase S55 HQJ03_020090 PF13476 AAA domain HQJ03_020095 PF02863 Arginine repressor, C-terminal domain HQJ03_020095 PF01316 Arginine repressor, DNA binding domain HQJ03_020100 PF01728 FtsJ-like methyltransferase HQJ03_020100 PF01479 S4 domain HQJ03_020105 PF13292 1-deoxy-D-xylulose-5-phosphate synthase HQJ03_020105 PF02779 Transketolase, pyrimidine binding domain HQJ03_020105 PF02780 Transketolase, C-terminal domain HQJ03_020110 PF00348 Polyprenyl synthetase HQJ03_020115 PF02609 Exonuclease VII small subunit HQJ03_020120 PF13742 OB-fold nucleic acid binding domain HQJ03_020120 PF02601 Exonuclease VII, large subunit HQJ03_020125 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain HQJ03_020125 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain HQJ03_020130 PF01029 NusB family HQJ03_020135 PF03780 Asp23 family, cell envelope-related function HQJ03_020140 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HQJ03_020140 PF02785 Biotin carboxylase C-terminal domain HQJ03_020140 PF00289 Biotin carboxylase, N-terminal domain HQJ03_020145 PF00364 Biotin-requiring enzyme HQJ03_020155 PF12685 SpoIIIAH-like protein HQJ03_020165 PF09581 Stage III sporulation protein AF (Spore_III_AF) HQJ03_020170 PF09546 Stage III sporulation protein AE (spore_III_AE) HQJ03_020175 PF06686 Stage III sporulation protein AC/AD protein family HQJ03_020180 PF06686 Stage III sporulation protein AC/AD protein family HQJ03_020185 PF09548 Stage III sporulation protein AB (spore_III_AB) HQJ03_020210 PF09285 Elongation factor P, C-terminal HQJ03_020210 PF08207 Elongation factor P (EF-P) KOW-like domain HQJ03_020210 PF01132 Elongation factor P (EF-P) OB domain HQJ03_020215 PF00557 Metallopeptidase family M24 HQJ03_020215 PF01321 Creatinase/Prolidase N-terminal domain HQJ03_020220 PF01220 Dehydroquinase class II HQJ03_020225 PF11085 Conserved membrane protein YqhR HQJ03_020230 PF07136 Protein of unknown function (DUF1385) HQJ03_020240 PF13419 Haloacid dehalogenase-like hydrolase HQJ03_020245 PF02742 Iron dependent repressor, metal binding and dimerisation domain HQJ03_020245 PF01325 Iron dependent repressor, N-terminal DNA binding domain HQJ03_020270 PF03099 Biotin/lipoate A/B protein ligase family HQJ03_020275 PF00581 Rhodanese-like domain HQJ03_020285 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family HQJ03_020285 PF00356 Bacterial regulatory proteins, lacI family HQJ03_020295 PF00893 Small Multidrug Resistance protein HQJ03_020300 PF00893 Small Multidrug Resistance protein HQJ03_020335 PF00005 ABC transporter HQJ03_020340 PF00392 Bacterial regulatory proteins, gntR family HQJ03_020355 PF02347 Glycine cleavage system P-protein HQJ03_020360 PF02347 Glycine cleavage system P-protein HQJ03_020365 PF01571 Aminomethyltransferase folate-binding domain HQJ03_020365 PF08669 Glycine cleavage T-protein C-terminal barrel domain HQJ03_020370 PF00271 Helicase conserved C-terminal domain HQJ03_020370 PF00176 SNF2 family N-terminal domain HQJ03_020375 PF11079 Bacterial protein YqhG of unknown function HQJ03_020395 PF14038 YqzE-like protein HQJ03_020400 PF01202 Shikimate kinase HQJ03_020435 PF00482 Type II secretion system (T2SS), protein F HQJ03_020440 PF00437 Type II/IV secretion system protein HQJ03_020450 PF11117 Protein of unknown function (DUF2626) HQJ03_020455 PF00375 Sodium:dicarboxylate symporter family HQJ03_020490 PF04101 Glycosyltransferase family 28 C-terminal domain HQJ03_020490 PF03033 Glycosyltransferase family 28 N-terminal domain HQJ03_020495 PF02574 Homocysteine S-methyltransferase HQJ03_020495 PF02310 B12 binding domain HQJ03_020495 PF02965 Vitamin B12 dependent methionine synthase, activation domain HQJ03_020495 PF02607 B12 binding domain HQJ03_020495 PF00809 Pterin binding enzyme HQJ03_020500 PF02219 Methylenetetrahydrofolate reductase HQJ03_020500 PF02574 Homocysteine S-methyltransferase HQJ03_020505 PF01053 Cys/Met metabolism PLP-dependent enzyme HQJ03_020510 PF01053 Cys/Met metabolism PLP-dependent enzyme HQJ03_020520 PF01022 Bacterial regulatory protein, arsR family HQJ03_020530 PF00753 Metallo-beta-lactamase superfamily HQJ03_020535 PF10958 Protein of unknown function (DUF2759) HQJ03_020540 PF00480 ROK family HQJ03_020545 PF06014 Bacterial protein of unknown function (DUF910) HQJ03_020550 PF01812 5-formyltetrahydrofolate cyclo-ligase family HQJ03_020555 PF00471 Ribosomal protein L33 HQJ03_020560 PF00483 Nucleotidyl transferase HQJ03_020565 PF01895 PhoU domain HQJ03_020570 PF00005 ABC transporter HQJ03_020575 PF00528 Binding-protein-dependent transport system inner membrane component HQJ03_020580 PF00528 Binding-protein-dependent transport system inner membrane component HQJ03_020585 PF12849 PBP superfamily domain HQJ03_020590 PF00905 Penicillin binding protein transpeptidase domain HQJ03_020590 PF03717 Penicillin-binding Protein dimerisation domain HQJ03_020595 PF07690 Major Facilitator Superfamily HQJ03_020600 PF02777 Iron/manganese superoxide dismutases, C-terminal domain HQJ03_020600 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain HQJ03_020610 PF06691 Protein of unknown function (DUF1189) HQJ03_020620 PF04551 GcpE protein HQJ03_020625 PF01475 Ferric uptake regulator family HQJ03_020630 PF00950 ABC 3 transport family HQJ03_020635 PF00005 ABC transporter HQJ03_020640 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 HQJ03_020640 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) HQJ03_020645 PF11116 Protein of unknown function (DUF2624) HQJ03_020650 PF01261 Xylose isomerase-like TIM barrel HQJ03_020655 PF00270 DEAD/DEAH box helicase HQJ03_020655 PF00271 Helicase conserved C-terminal domain HQJ03_020665 PF02401 LytB protein HQJ03_020670 PF01784 NIF3 (NGG1p interacting factor 3) HQJ03_020675 PF04816 tRNA (adenine(22)-N(1))-methyltransferase HQJ03_020680 PF13442 Cytochrome C oxidase, cbb3-type, subunit III HQJ03_020685 PF03979 Sigma-70 factor, region 1.1 HQJ03_020685 PF04542 Sigma-70 region 2 HQJ03_020685 PF04539 Sigma-70 region 3 HQJ03_020685 PF04545 Sigma-70, region 4 HQJ03_020685 PF00140 Sigma-70 factor, region 1.2 HQJ03_020690 PF10410 DnaB-helicase binding domain of primase HQJ03_020690 PF08275 DNA primase catalytic core, N-terminal domain HQJ03_020690 PF01807 CHC2 zinc finger HQJ03_020700 PF03618 Kinase/pyrophosphorylase HQJ03_020705 PF00571 CBS domain HQJ03_020705 PF08279 HTH domain HQJ03_020710 PF11967 Recombination protein O N terminal HQJ03_020710 PF02565 Recombination protein O C terminal HQJ03_020720 PF07650 KH domain HQJ03_020720 PF01926 50S ribosome-binding GTPase HQJ03_020725 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HQJ03_020730 PF01219 Prokaryotic diacylglycerol kinase HQJ03_020735 PF02130 Uncharacterized protein family UPF0054 HQJ03_020740 PF07698 7TM receptor with intracellular HD hydrolase HQJ03_020740 PF07697 7TM-HD extracellular HQJ03_020740 PF01966 HD domain HQJ03_020745 PF02562 PhoH-like protein HQJ03_020750 PF06898 Putative stage IV sporulation protein YqfD HQJ03_020755 PF07873 YabP family HQJ03_020760 PF09424 Yqey-like protein HQJ03_020765 PF01165 Ribosomal protein S21 HQJ03_020770 PF04055 Radical SAM superfamily HQJ03_020770 PF01938 TRAM domain HQJ03_020770 PF00919 Uncharacterized protein family UPF0004 HQJ03_020775 PF04452 RNA methyltransferase HQJ03_020785 PF00226 DnaJ domain HQJ03_020785 PF01556 DnaJ C terminal domain HQJ03_020785 PF00684 DnaJ central domain HQJ03_020790 PF00012 Hsp70 protein HQJ03_020795 PF01025 GrpE HQJ03_020800 PF01628 HrcA protein C terminal domain HQJ03_020805 PF04055 Radical SAM superfamily HQJ03_020805 PF06969 HemN C-terminal domain HQJ03_020810 PF01638 HxlR-like helix-turn-helix HQJ03_020815 PF00679 Elongation factor G C-terminus HQJ03_020815 PF00009 Elongation factor Tu GTP binding domain HQJ03_020815 PF03144 Elongation factor Tu domain 2 HQJ03_020815 PF06421 GTP-binding protein LepA C-terminus HQJ03_020825 PF03418 Germination protease HQJ03_020830 PF01649 Ribosomal protein S20 HQJ03_020835 PF06144 DNA polymerase III, delta subunit HQJ03_020840 PF14141 YqzM-like protein HQJ03_020845 PF03772 Competence protein HQJ03_020845 PF00753 Metallo-beta-lactamase superfamily HQJ03_020845 PF13567 Domain of unknown function (DUF4131) HQJ03_020850 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HQJ03_020855 PF10531 SLBB domain HQJ03_020860 PF14748 Pyrroline-5-carboxylate reductase dimerisation HQJ03_020860 PF03807 NADP oxidoreductase coenzyme F420-dependent HQJ03_020865 PF13649 Methyltransferase domain HQJ03_020875 PF01966 HD domain HQJ03_020880 PF01467 Cytidylyltransferase-like HQJ03_020885 PF01985 CRS1 / YhbY (CRM) domain HQJ03_020890 PF08501 Shikimate dehydrogenase substrate binding domain HQJ03_020890 PF01488 Shikimate / quinate 5-dehydrogenase HQJ03_020890 PF18317 Shikimate 5'-dehydrogenase C-terminal domain HQJ03_020895 PF01926 50S ribosome-binding GTPase HQJ03_020910 PF02666 Phosphatidylserine decarboxylase HQJ03_020915 PF04542 Sigma-70 region 2 HQJ03_020915 PF04545 Sigma-70, region 4 HQJ03_020930 PF00471 Ribosomal protein L33 HQJ03_020935 PF00881 Nitroreductase family HQJ03_020940 PF04607 Region found in RelA / SpoT proteins HQJ03_020950 PF00245 Alkaline phosphatase HQJ03_020955 PF00583 Acetyltransferase (GNAT) family HQJ03_020960 PF00561 alpha/beta hydrolase fold HQJ03_020960 PF08386 TAP-like protein HQJ03_021000 PF13860 FlgD Ig-like domain HQJ03_021000 PF05922 Peptidase inhibitor I9 HQJ03_021000 PF02225 PA domain HQJ03_021000 PF00082 Subtilase family HQJ03_021005 PF00351 Biopterin-dependent aromatic amino acid hydroxylase HQJ03_021015 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HQJ03_021020 PF07681 DoxX HQJ03_021050 PF00005 ABC transporter HQJ03_021055 PF01032 FecCD transport family HQJ03_021060 PF01497 Periplasmic binding protein HQJ03_021065 PF14143 YrhC-like protein HQJ03_021070 PF00171 Aldehyde dehydrogenase family HQJ03_021070 PF00465 Iron-containing alcohol dehydrogenase HQJ03_021075 PF01053 Cys/Met metabolism PLP-dependent enzyme HQJ03_021080 PF00291 Pyridoxal-phosphate dependent enzyme HQJ03_021085 PF01048 Phosphorylase superfamily HQJ03_021090 PF08241 Methyltransferase domain HQJ03_021105 PF03717 Penicillin-binding Protein dimerisation domain HQJ03_021105 PF00905 Penicillin binding protein transpeptidase domain HQJ03_021115 PF01272 Transcription elongation factor, GreA/GreB, C-term HQJ03_021115 PF03449 Transcription elongation factor, N-terminal HQJ03_021120 PF00485 Phosphoribulokinase / Uridine kinase family HQJ03_021125 PF01136 Peptidase family U32 HQJ03_021125 PF16325 Peptidase family U32 C-terminal domain HQJ03_021130 PF01136 Peptidase family U32 HQJ03_021135 PF01596 O-methyltransferase HQJ03_021140 PF02618 YceG-like family HQJ03_021145 PF06949 Protein of unknown function (DUF1292) HQJ03_021150 PF03652 Holliday junction resolvase HQJ03_021155 PF06135 IreB regulatory phosphoprotein HQJ03_021160 PF02272 DHHA1 domain HQJ03_021160 PF01411 tRNA synthetases class II (A) HQJ03_021160 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HQJ03_021170 PF01594 AI-2E family transporter HQJ03_021190 PF14490 Helix-hairpin-helix containing domain HQJ03_021190 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain HQJ03_021190 PF13538 UvrD-like helicase C-terminal domain HQJ03_021205 PF00266 Aminotransferase class-V HQJ03_021210 PF02082 Transcriptional regulator HQJ03_021215 PF16193 AAA C-terminal domain HQJ03_021215 PF12002 MgsA AAA+ ATPase C terminal HQJ03_021215 PF05496 Holliday junction DNA helicase RuvB P-loop domain HQJ03_021225 PF00899 ThiF family HQJ03_021230 PF00152 tRNA synthetases class II (D, K and N) HQJ03_021230 PF01336 OB-fold nucleic acid binding domain HQJ03_021230 PF02938 GAD domain HQJ03_021235 PF03129 Anticodon binding domain HQJ03_021235 PF13393 Histidyl-tRNA synthetase HQJ03_021245 PF02580 D-Tyr-tRNA(Tyr) deacylase HQJ03_021250 PF02824 TGS domain HQJ03_021250 PF04607 Region found in RelA / SpoT proteins HQJ03_021250 PF13291 ACT domain HQJ03_021255 PF00156 Phosphoribosyl transferase domain HQJ03_021260 PF02272 DHHA1 domain HQJ03_021260 PF10141 Single-strand DNA-specific exonuclease, C terminal domain HQJ03_021260 PF01368 DHH family HQJ03_021260 PF17768 RecJ OB domain HQJ03_021265 PF01545 Cation efflux family HQJ03_021265 PF16916 Dimerisation domain of Zinc Transporter HQJ03_021270 PF07549 SecD/SecF GG Motif HQJ03_021270 PF02355 Protein export membrane protein HQJ03_021275 PF13797 Post-transcriptional regulator HQJ03_021280 PF01943 Polysaccharide biosynthesis protein HQJ03_021280 PF14667 Polysaccharide biosynthesis C-terminal domain HQJ03_021285 PF04239 Protein of unknown function (DUF421) HQJ03_021295 PF02699 Preprotein translocase subunit HQJ03_021300 PF01702 Queuine tRNA-ribosyltransferase HQJ03_021305 PF02547 Queuosine biosynthesis protein HQJ03_021310 PF11146 Protein of unknown function (DUF2905) HQJ03_021315 PF17864 RuvB AAA lid domain HQJ03_021315 PF05491 RuvB C-terminal winged helix domain HQJ03_021315 PF05496 Holliday junction DNA helicase RuvB P-loop domain HQJ03_021320 PF01330 RuvA N terminal domain HQJ03_021320 PF07499 RuvA, C-terminal domain HQJ03_021325 PF01497 Periplasmic binding protein HQJ03_021345 PF01476 LysM domain HQJ03_021350 PF02445 Quinolinate synthetase A protein HQJ03_021355 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain HQJ03_021355 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain HQJ03_021360 PF02910 Fumarate reductase flavoprotein C-term HQJ03_021360 PF00890 FAD binding domain HQJ03_021365 PF00266 Aminotransferase class-V HQJ03_021370 PF08279 HTH domain HQJ03_021370 PF02829 3H domain HQJ03_021375 PF03473 MOSC domain HQJ03_021375 PF03475 3-alpha domain HQJ03_021380 PF00800 Prephenate dehydratase HQJ03_021380 PF01842 ACT domain HQJ03_021385 PF02687 FtsX-like permease family HQJ03_021390 PF02687 FtsX-like permease family HQJ03_021395 PF00005 ABC transporter HQJ03_021400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQJ03_021405 PF00072 Response regulator receiver domain HQJ03_021405 PF00486 Transcriptional regulatory protein, C terminal HQJ03_021410 PF09269 Domain of unknown function (DUF1967) HQJ03_021410 PF01926 50S ribosome-binding GTPase HQJ03_021410 PF01018 GTP1/OBG HQJ03_021415 PF14682 Sporulation initiation phospho-transferase B, C-terminal HQJ03_021415 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain HQJ03_021420 PF01016 Ribosomal L27 protein HQJ03_021425 PF04327 Cysteine protease Prp HQJ03_021430 PF00829 Ribosomal prokaryotic L21 protein HQJ03_021435 PF00575 S1 RNA binding domain HQJ03_021435 PF10150 Ribonuclease E/G family HQJ03_021440 PF02163 Peptidase family M50 HQJ03_021445 PF01551 Peptidase family M23 HQJ03_021450 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain HQJ03_021455 PF03775 Septum formation inhibitor MinC, C-terminal domain HQJ03_021465 PF04085 rod shape-determining protein MreC HQJ03_021475 PF04002 RadC-like JAB domain HQJ03_021480 PF02545 Maf-like protein HQJ03_021490 PF08245 Mur ligase middle domain HQJ03_021490 PF02875 Mur ligase family, glutamate ligase domain HQJ03_021495 PF00133 tRNA synthetases class I (I, L, M and V) HQJ03_021495 PF08264 Anticodon-binding domain of tRNA HQJ03_021495 PF10458 Valyl tRNA synthetase tRNA binding arm HQJ03_021505 PF01476 LysM domain HQJ03_021510 PF00202 Aminotransferase class-III HQJ03_021515 PF00490 Delta-aminolevulinic acid dehydratase HQJ03_021520 PF02602 Uroporphyrinogen-III synthase HemD HQJ03_021525 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain HQJ03_021525 PF03900 Porphobilinogen deaminase, C-terminal domain HQJ03_021530 PF01578 Cytochrome C assembly protein HQJ03_021535 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain HQJ03_021535 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain HQJ03_021535 PF01488 Shikimate / quinate 5-dehydrogenase HQJ03_021540 PF01047 MarR family HQJ03_021545 PF02566 OsmC-like protein HQJ03_021550 PF01926 50S ribosome-binding GTPase HQJ03_021555 PF00004 ATPase family associated with various cellular activities (AAA) HQJ03_021555 PF05362 Lon protease (S16) C-terminal proteolytic domain HQJ03_021555 PF02190 ATP-dependent protease La (LON) substrate-binding domain HQJ03_021560 PF00004 ATPase family associated with various cellular activities (AAA) HQJ03_021560 PF05362 Lon protease (S16) C-terminal proteolytic domain HQJ03_021565 PF10431 C-terminal, D2-small domain, of ClpB protein HQJ03_021565 PF07724 AAA domain (Cdc48 subfamily) HQJ03_021565 PF06689 ClpX C4-type zinc finger HQJ03_021570 PF05698 Bacterial trigger factor protein (TF) C-terminus HQJ03_021570 PF05697 Bacterial trigger factor protein (TF) HQJ03_021570 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HQJ03_021585 PF11724 YvbH-like oligomerisation region HQJ03_021585 PF08000 Bacterial PH domain HQJ03_021605 PF12850 Calcineurin-like phosphoesterase superfamily domain HQJ03_021610 PF01725 Ham1 family HQJ03_021615 PF01138 3' exoribonuclease family, domain 1 HQJ03_021615 PF03725 3' exoribonuclease family, domain 2 HQJ03_021620 PF10646 Sporulation and spore germination HQJ03_021625 PF01177 Asp/Glu/Hydantoin racemase HQJ03_021630 PF07690 Major Facilitator Superfamily HQJ03_021640 PF00440 Bacterial regulatory proteins, tetR family HQJ03_021650 PF00196 Bacterial regulatory proteins, luxR family HQJ03_021655 PF00860 Permease family HQJ03_021660 PF07969 Amidohydrolase family HQJ03_021665 PF04024 PspC domain HQJ03_021670 PF01381 Helix-turn-helix HQJ03_021670 PF07883 Cupin domain HQJ03_021675 PF13536 Putative multidrug resistance efflux transporter HQJ03_021680 PF00230 Major intrinsic protein HQJ03_021685 PF02082 Transcriptional regulator HQJ03_021695 PF00005 ABC transporter HQJ03_021695 PF13732 Domain of unknown function (DUF4162) HQJ03_021700 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) HQJ03_021705 PF00691 OmpA family HQJ03_021705 PF13677 Membrane MotB of proton-channel complex MotA/MotB HQJ03_021710 PF01618 MotA/TolQ/ExbB proton channel family HQJ03_021715 PF02557 D-alanyl-D-alanine carboxypeptidase HQJ03_021720 PF03061 Thioesterase superfamily HQJ03_021725 PF13085 2Fe-2S iron-sulfur cluster binding domain HQJ03_021725 PF13183 4Fe-4S dicluster domain HQJ03_021730 PF02910 Fumarate reductase flavoprotein C-term HQJ03_021730 PF00890 FAD binding domain HQJ03_021735 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit HQJ03_021740 PF10702 Protein of unknown function (DUF2507) HQJ03_021745 PF08459 UvrC Helix-hairpin-helix N-terminal HQJ03_021745 PF02151 UvrB/uvrC motif HQJ03_021745 PF01541 GIY-YIG catalytic domain HQJ03_021750 PF00085 Thioredoxin HQJ03_021755 PF00766 Electron transfer flavoprotein FAD-binding domain HQJ03_021755 PF01012 Electron transfer flavoprotein domain HQJ03_021760 PF01012 Electron transfer flavoprotein domain HQJ03_021765 PF00378 Enoyl-CoA hydratase/isomerase HQJ03_021770 PF08359 YsiA-like protein, C-terminal region HQJ03_021770 PF00440 Bacterial regulatory proteins, tetR family HQJ03_021775 PF13193 AMP-binding enzyme C-terminal domain HQJ03_021775 PF00501 AMP-binding enzyme HQJ03_021785 PF01497 Periplasmic binding protein HQJ03_021790 PF01032 FecCD transport family HQJ03_021800 PF05163 DinB family HQJ03_021825 PF00005 ABC transporter HQJ03_021830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQJ03_021830 PF00512 His Kinase A (phospho-acceptor) domain HQJ03_021835 PF00486 Transcriptional regulatory protein, C terminal HQJ03_021835 PF00072 Response regulator receiver domain HQJ03_021845 PF09962 Uncharacterized conserved protein (DUF2196) HQJ03_021850 PF17785 PUA-like domain HQJ03_021850 PF10672 S-adenosylmethionine-dependent methyltransferase HQJ03_021855 PF03992 Antibiotic biosynthesis monooxygenase HQJ03_021860 PF04203 Sortase domain HQJ03_021865 PF00005 ABC transporter HQJ03_021870 PF01032 FecCD transport family HQJ03_021875 PF01497 Periplasmic binding protein HQJ03_021880 PF05031 Iron Transport-associated domain HQJ03_021890 PF05031 Iron Transport-associated domain HQJ03_021895 PF05525 Branched-chain amino acid transport protein HQJ03_021900 PF00849 RNA pseudouridylate synthase HQJ03_021900 PF01479 S4 domain HQJ03_021905 PF01713 Smr domain HQJ03_021905 PF00488 MutS domain V HQJ03_021910 PF14791 DNA polymerase beta thumb HQJ03_021910 PF14716 Helix-hairpin-helix domain HQJ03_021910 PF02811 PHP domain HQJ03_021915 PF02674 Colicin V production protein HQJ03_021920 PF05164 Cell division protein ZapA HQJ03_021925 PF01351 Ribonuclease HII HQJ03_021925 PF11858 Domain of unknown function (DUF3378) HQJ03_021945 PF01336 OB-fold nucleic acid binding domain HQJ03_021945 PF00152 tRNA synthetases class II (D, K and N) HQJ03_021955 PF07690 Major Facilitator Superfamily HQJ03_021960 PF02627 Carboxymuconolactone decarboxylase family HQJ03_021965 PF03484 tRNA synthetase B5 domain HQJ03_021965 PF03147 Ferredoxin-fold anticodon binding domain HQJ03_021965 PF01588 Putative tRNA binding domain HQJ03_021965 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain HQJ03_021965 PF03483 B3/4 domain HQJ03_021970 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain HQJ03_021970 PF01409 tRNA synthetases class II core domain (F) HQJ03_021975 PF00588 SpoU rRNA Methylase family HQJ03_021975 PF08032 RNA 2'-O ribose methyltransferase substrate binding HQJ03_021980 PF14098 Small, acid-soluble spore protein I HQJ03_021985 PF01966 HD domain HQJ03_022000 PF07690 Major Facilitator Superfamily HQJ03_022010 PF00440 Bacterial regulatory proteins, tetR family HQJ03_022010 PF16859 Tetracyclin repressor-like, C-terminal domain HQJ03_022015 PF05343 M42 glutamyl aminopeptidase HQJ03_022025 PF00453 Ribosomal protein L20 HQJ03_022030 PF01632 Ribosomal protein L35 HQJ03_022035 PF05198 Translation initiation factor IF-3, N-terminal domain HQJ03_022035 PF00707 Translation initiation factor IF-3, C-terminal domain HQJ03_022040 PF03129 Anticodon binding domain HQJ03_022040 PF02824 TGS domain HQJ03_022040 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HQJ03_022040 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HQJ03_022045 PF08812 YtxC-like family HQJ03_022050 PF13783 Domain of unknown function (DUF4177) HQJ03_022055 PF07319 Primosomal protein DnaI N-terminus HQJ03_022055 PF01695 IstB-like ATP binding protein HQJ03_022060 PF07261 Replication initiation and membrane attachment HQJ03_022065 PF03477 ATP cone domain HQJ03_022070 PF02675 S-adenosylmethionine decarboxylase HQJ03_022075 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HQJ03_022075 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HQJ03_022080 PF01121 Dephospho-CoA kinase HQJ03_022085 PF02659 Putative manganese efflux pump HQJ03_022090 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain HQJ03_022090 PF06827 Zinc finger found in FPG and IleRS HQJ03_022090 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain HQJ03_022095 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain HQJ03_022095 PF00476 DNA polymerase family A HQJ03_022095 PF01367 5'-3' exonuclease, C-terminal SAM fold HQJ03_022100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQJ03_022100 PF16736 Single Cache-like HQJ03_022100 PF00989 PAS fold HQJ03_022100 PF00512 His Kinase A (phospho-acceptor) domain HQJ03_022105 PF00072 Response regulator receiver domain HQJ03_022105 PF00486 Transcriptional regulatory protein, C terminal HQJ03_022120 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain HQJ03_022120 PF00056 lactate/malate dehydrogenase, NAD binding domain HQJ03_022125 PF00180 Isocitrate/isopropylmalate dehydrogenase HQJ03_022130 PF00285 Citrate synthase, C-terminal domain HQJ03_022135 PF04284 Protein of unknown function (DUF441) HQJ03_022140 PF01594 AI-2E family transporter HQJ03_022145 PF04186 FxsA cytoplasmic membrane protein HQJ03_022150 PF02887 Pyruvate kinase, alpha/beta domain HQJ03_022150 PF00224 Pyruvate kinase, barrel domain HQJ03_022150 PF00391 PEP-utilising enzyme, mobile domain HQJ03_022155 PF00365 Phosphofructokinase HQJ03_022160 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit HQJ03_022165 PF01039 Carboxyl transferase domain HQJ03_022165 PF17848 Acetyl-coA carboxylase zinc finger domain HQJ03_022170 PF00392 Bacterial regulatory proteins, gntR family HQJ03_022175 PF03949 Malic enzyme, NAD binding domain HQJ03_022175 PF00390 Malic enzyme, N-terminal domain HQJ03_022180 PF07733 Bacterial DNA polymerase III alpha NTPase domain HQJ03_022180 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HQJ03_022180 PF14579 Helix-hairpin-helix motif HQJ03_022180 PF02811 PHP domain HQJ03_022180 PF01336 OB-fold nucleic acid binding domain HQJ03_022185 PF14034 Sporulation protein YtrH HQJ03_022195 PF01368 DHH family HQJ03_022195 PF02272 DHHA1 domain HQJ03_022200 PF14007 YtpI-like protein HQJ03_022210 PF00392 Bacterial regulatory proteins, gntR family HQJ03_022210 PF07085 DRTGG domain HQJ03_022210 PF03061 Thioesterase superfamily HQJ03_022210 PF00571 CBS domain HQJ03_022225 PF01321 Creatinase/Prolidase N-terminal domain HQJ03_022225 PF00557 Metallopeptidase family M24 HQJ03_022260 PF12746 GNAT acetyltransferase HQJ03_022265 PF07883 Cupin domain HQJ03_022275 PF01262 Alanine dehydrogenase/PNT, C-terminal domain HQJ03_022275 PF05222 Alanine dehydrogenase/PNT, N-terminal domain HQJ03_022285 PF00582 Universal stress protein family HQJ03_022305 PF14698 Argininosuccinate lyase C-terminal HQJ03_022305 PF00206 Lyase HQJ03_022310 PF00764 Arginosuccinate synthase HQJ03_022330 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) HQJ03_022330 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 HQJ03_022335 PF12787 EcsC protein family HQJ03_022350 PF00871 Acetokinase family HQJ03_022355 PF02384 N-6 DNA Methylase HQJ03_022360 PF08534 Redoxin HQJ03_022365 PF09579 Sporulation protein YtfJ (Spore_YtfJ) HQJ03_022375 PF01513 ATP-NAD kinase HQJ03_022380 PF07969 Amidohydrolase family HQJ03_022390 PF00501 AMP-binding enzyme HQJ03_022390 PF13193 AMP-binding enzyme C-terminal domain HQJ03_022395 PF00269 Small, acid-soluble spore proteins, alpha/beta type HQJ03_022400 PF02568 Thiamine biosynthesis protein (ThiI) HQJ03_022400 PF02926 THUMP domain HQJ03_022405 PF00266 Aminotransferase class-V HQJ03_022410 PF06160 Septation ring formation regulator, EzrA HQJ03_022415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HQJ03_022415 PF03466 LysR substrate binding domain HQJ03_022420 PF00892 EamA-like transporter family HQJ03_022425 PF00440 Bacterial regulatory proteins, tetR family HQJ03_022430 PF13185 GAF domain HQJ03_022435 PF01053 Cys/Met metabolism PLP-dependent enzyme HQJ03_022440 PF01479 S4 domain HQJ03_022440 PF00163 Ribosomal protein S4/S9 N-terminal domain HQJ03_022455 PF00579 tRNA synthetases class I (W and Y) HQJ03_022455 PF01479 S4 domain HQJ03_022460 PF14602 Hexapeptide repeat of succinyl-transferase HQJ03_022460 PF12464 Maltose acetyltransferase HQJ03_022465 PF00501 AMP-binding enzyme HQJ03_022465 PF13193 AMP-binding enzyme C-terminal domain HQJ03_022470 PF00583 Acetyltransferase (GNAT) family HQJ03_022475 PF00571 CBS domain HQJ03_022480 PF00850 Histone deacetylase domain HQJ03_022495 PF00486 Transcriptional regulatory protein, C terminal HQJ03_022495 PF00072 Response regulator receiver domain HQJ03_022500 PF00672 HAMP domain HQJ03_022500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQJ03_022500 PF00512 His Kinase A (phospho-acceptor) domain HQJ03_022500 PF13426 PAS domain HQJ03_022505 PF12796 Ankyrin repeats (3 copies) HQJ03_022510 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HQJ03_022515 PF01741 Large-conductance mechanosensitive channel, MscL HQJ03_022540 PF00356 Bacterial regulatory proteins, lacI family HQJ03_022545 PF00793 DAHP synthetase I family HQJ03_022545 PF01817 Chorismate mutase type II HQJ03_022550 PF07537 CamS sex pheromone cAM373 precursor HQJ03_022555 PF11009 Protein of unknown function (DUF2847) HQJ03_022565 PF02073 Thermophilic metalloprotease (M29) HQJ03_022590 PF13302 Acetyltransferase (GNAT) domain HQJ03_022595 PF01225 Mur ligase family, catalytic domain HQJ03_022595 PF02875 Mur ligase family, glutamate ligase domain HQJ03_022595 PF08245 Mur ligase middle domain HQJ03_022605 PF01580 FtsK/SpoIIIE family HQJ03_022605 PF09397 Ftsk gamma domain HQJ03_022605 PF17854 FtsK alpha domain HQJ03_022610 PF01476 LysM domain HQJ03_022610 PF01520 N-acetylmuramoyl-L-alanine amidase HQJ03_022620 PF14794 Domain of unknown function (DUF4479) HQJ03_022620 PF01588 Putative tRNA binding domain HQJ03_022625 PF07285 Protein of unknown function (DUF1444) HQJ03_022630 PF00085 Thioredoxin HQJ03_022635 PF01931 Protein of unknown function DUF84 HQJ03_022640 PF05343 M42 glutamyl aminopeptidase HQJ03_022650 PF00753 Metallo-beta-lactamase superfamily HQJ03_022655 PF02390 Putative methyltransferase HQJ03_022660 PF14165 YtzH-like protein HQJ03_022665 PF01636 Phosphotransferase enzyme family HQJ03_022670 PF17999 Pullulanase N1-terminal domain HQJ03_022670 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) HQJ03_022670 PF00128 Alpha amylase, catalytic domain HQJ03_022675 PF02834 LigT like Phosphoesterase HQJ03_022680 PF01546 Peptidase family M20/M25/M40 HQJ03_022685 PF08220 DeoR-like helix-turn-helix domain HQJ03_022690 PF00849 RNA pseudouridylate synthase HQJ03_022690 PF01479 S4 domain HQJ03_022695 PF01943 Polysaccharide biosynthesis protein HQJ03_022695 PF14667 Polysaccharide biosynthesis C-terminal domain HQJ03_022705 PF07690 Major Facilitator Superfamily HQJ03_022710 PF01022 Bacterial regulatory protein, arsR family HQJ03_022715 PF08327 Activator of Hsp90 ATPase homolog 1-like protein HQJ03_022725 PF10957 Sporulation protein Cse60 HQJ03_022735 PF02559 CarD-like/TRCF domain HQJ03_022745 PF06800 Sugar transport protein HQJ03_022760 PF02391 MoaE protein HQJ03_022765 PF03205 Molybdopterin guanine dinucleotide synthesis protein B HQJ03_022770 PF03453 MoeA N-terminal region (domain I and II) HQJ03_022770 PF03454 MoeA C-terminal region (domain IV) HQJ03_022770 PF00994 Probable molybdopterin binding domain HQJ03_022775 PF01967 MoaC family HQJ03_022780 PF00899 ThiF family HQJ03_022785 PF06463 Molybdenum Cofactor Synthesis C HQJ03_022785 PF04055 Radical SAM superfamily HQJ03_022805 PF00581 Rhodanese-like domain HQJ03_022815 PF00561 alpha/beta hydrolase fold HQJ03_022820 PF03323 Bacillus/Clostridium GerA spore germination protein HQJ03_022825 PF03845 Spore germination protein HQJ03_022850 PF08264 Anticodon-binding domain of tRNA HQJ03_022850 PF09334 tRNA synthetases class I (M) HQJ03_022850 PF00133 tRNA synthetases class I (I, L, M and V) HQJ03_022850 PF13603 Leucyl-tRNA synthetase, Domain 2 HQJ03_022855 PF07690 Major Facilitator Superfamily HQJ03_022860 PF00999 Sodium/hydrogen exchanger family HQJ03_022865 PF02080 TrkA-C domain HQJ03_022870 PF00589 Phage integrase family HQJ03_022880 PF00005 ABC transporter HQJ03_022885 PF07786 Protein of unknown function (DUF1624) HQJ03_022885 PF04235 Protein of unknown function (DUF418) HQJ03_022895 PF10732 Protein of unknown function (DUF2524) HQJ03_022900 PF16199 Radical_SAM C-terminal domain HQJ03_022900 PF04055 Radical SAM superfamily HQJ03_022905 PF06962 Putative rRNA methylase HQJ03_022910 PF01177 Asp/Glu/Hydantoin racemase HQJ03_022920 PF10776 Protein of unknown function (DUF2600) HQJ03_022925 PF12146 Serine aminopeptidase, S33 HQJ03_022930 PF00132 Bacterial transferase hexapeptide (six repeats) HQJ03_022935 PF01569 PAP2 superfamily HQJ03_022940 PF00534 Glycosyl transferases group 1 HQJ03_022940 PF13439 Glycosyltransferase Family 4 HQJ03_022945 PF12804 MobA-like NTP transferase domain HQJ03_022950 PF00994 Probable molybdopterin binding domain HQJ03_022960 PF13302 Acetyltransferase (GNAT) domain HQJ03_022965 PF02773 S-adenosylmethionine synthetase, C-terminal domain HQJ03_022965 PF02772 S-adenosylmethionine synthetase, central domain HQJ03_022965 PF00438 S-adenosylmethionine synthetase, N-terminal domain HQJ03_022970 PF01293 Phosphoenolpyruvate carboxykinase HQJ03_023000 PF13426 PAS domain HQJ03_023000 PF13188 PAS domain HQJ03_023000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQJ03_023000 PF00512 His Kinase A (phospho-acceptor) domain HQJ03_023000 PF00989 PAS fold HQJ03_023005 PF02743 Cache domain HQJ03_023005 PF00512 His Kinase A (phospho-acceptor) domain HQJ03_023005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQJ03_023010 PF18011 C-terminal domain found in long catalases HQJ03_023010 PF06628 Catalase-related immune-responsive HQJ03_023010 PF00199 Catalase HQJ03_023020 PF08386 TAP-like protein HQJ03_023020 PF00561 alpha/beta hydrolase fold HQJ03_023025 PF00884 Sulfatase HQJ03_023055 PF00005 ABC transporter HQJ03_023060 PF00528 Binding-protein-dependent transport system inner membrane component HQJ03_023075 PF13419 Haloacid dehalogenase-like hydrolase HQJ03_023085 PF00293 NUDIX domain HQJ03_023115 PF02664 S-Ribosylhomocysteinase (LuxS) HQJ03_023120 PF01809 Putative membrane protein insertion efficiency factor HQJ03_023125 PF00484 Carbonic anhydrase HQJ03_023130 PF01654 Cytochrome bd terminal oxidase subunit I HQJ03_023135 PF02322 Cytochrome bd terminal oxidase subunit II HQJ03_023140 PF10676 Spore germination protein gerPA/gerPF HQJ03_023150 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) HQJ03_023150 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 HQJ03_023170 PF04012 PspA/IM30 family HQJ03_023190 PF07664 Ferrous iron transport protein B C terminus HQJ03_023190 PF17910 FeoB cytosolic helical domain HQJ03_023190 PF02421 Ferrous iron transport protein B HQJ03_023190 PF07670 Nucleoside recognition HQJ03_023200 PF09515 Thiamine transporter protein (Thia_YuaJ) HQJ03_023205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQJ03_023205 PF00672 HAMP domain HQJ03_023205 PF00512 His Kinase A (phospho-acceptor) domain HQJ03_023210 PF00072 Response regulator receiver domain HQJ03_023210 PF00486 Transcriptional regulatory protein, C terminal HQJ03_023235 PF00156 Phosphoribosyl transferase domain HQJ03_023240 PF00781 Diacylglycerol kinase catalytic domain HQJ03_023280 PF09335 SNARE associated Golgi protein HQJ03_023285 PF00398 Ribosomal RNA adenine dimethylase HQJ03_023290 PF02687 FtsX-like permease family HQJ03_023295 PF00005 ABC transporter HQJ03_023300 PF06445 GyrI-like small molecule binding domain HQJ03_023300 PF12833 Helix-turn-helix domain HQJ03_023310 PF07853 Protein of unknown function (DUF1648) HQJ03_023310 PF13630 SdpI/YhfL protein family HQJ03_023315 PF01022 Bacterial regulatory protein, arsR family HQJ03_023320 PF00486 Transcriptional regulatory protein, C terminal HQJ03_023320 PF00072 Response regulator receiver domain HQJ03_023325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQJ03_023330 PF02687 FtsX-like permease family HQJ03_023335 PF02687 FtsX-like permease family HQJ03_023340 PF00005 ABC transporter HQJ03_023345 PF02687 FtsX-like permease family HQJ03_023355 PF00440 Bacterial regulatory proteins, tetR family HQJ03_023355 PF13977 BetI-type transcriptional repressor, C-terminal HQJ03_023365 PF02447 GntP family permease HQJ03_023370 PF07702 UTRA domain HQJ03_023370 PF00392 Bacterial regulatory proteins, gntR family HQJ03_023380 PF07071 KDGP aldolase HQJ03_023385 PF03841 L-seryl-tRNA selenium transferase HQJ03_023390 PF01979 Amidohydrolase family HQJ03_023395 PF02557 D-alanyl-D-alanine carboxypeptidase HQJ03_023400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQJ03_023400 PF00512 His Kinase A (phospho-acceptor) domain HQJ03_023405 PF00072 Response regulator receiver domain HQJ03_023405 PF00486 Transcriptional regulatory protein, C terminal HQJ03_023410 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain HQJ03_023410 PF13378 Enolase C-terminal domain-like HQJ03_023415 PF00501 AMP-binding enzyme HQJ03_023415 PF13193 AMP-binding enzyme C-terminal domain HQJ03_023420 PF00378 Enoyl-CoA hydratase/isomerase HQJ03_023425 PF00561 alpha/beta hydrolase fold HQJ03_023430 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HQJ03_023430 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HQJ03_023430 PF16582 Middle domain of thiamine pyrophosphate HQJ03_023435 PF00425 chorismate binding enzyme HQJ03_023440 PF01040 UbiA prenyltransferase family HQJ03_023445 PF01258 Prokaryotic dksA/traR C4-type zinc finger HQJ03_023450 PF00313 'Cold-shock' DNA-binding domain HQJ03_023470 PF00343 Carbohydrate phosphorylase HQJ03_023475 PF08323 Starch synthase catalytic domain HQJ03_023475 PF00534 Glycosyl transferases group 1 HQJ03_023480 PF00483 Nucleotidyl transferase HQJ03_023485 PF00483 Nucleotidyl transferase HQJ03_023490 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) HQJ03_023490 PF02806 Alpha amylase, C-terminal all-beta domain HQJ03_023490 PF00128 Alpha amylase, catalytic domain HQJ03_023500 PF00082 Subtilase family HQJ03_023500 PF02225 PA domain HQJ03_023500 PF05922 Peptidase inhibitor I9 HQJ03_023500 PF13860 FlgD Ig-like domain HQJ03_023505 PF00056 lactate/malate dehydrogenase, NAD binding domain HQJ03_023505 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain HQJ03_023600 PF05697 Bacterial trigger factor protein (TF) HQJ03_023600 PF05698 Bacterial trigger factor protein (TF) C-terminus HQJ03_023635 PF02308 MgtC family HQJ03_023640 PF02254 TrkA-N domain HQJ03_023640 PF07885 Ion channel HQJ03_023645 PF08868 YugN-like family HQJ03_023650 PF00342 Phosphoglucose isomerase HQJ03_023655 PF04070 Domain of unknown function (DUF378) HQJ03_023660 PF00575 S1 RNA binding domain HQJ03_023665 PF00155 Aminotransferase class I and II HQJ03_023670 PF01037 Lrp/AsnC ligand binding domain HQJ03_023675 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HQJ03_023675 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HQJ03_023680 PF00561 alpha/beta hydrolase fold HQJ03_023680 PF08386 TAP-like protein HQJ03_023690 PF00155 Aminotransferase class I and II HQJ03_023705 PF08810 Kinase associated protein B HQJ03_023710 PF00929 Exonuclease HQJ03_023715 PF03600 Citrate transporter HQJ03_023730 PF03129 Anticodon binding domain HQJ03_023730 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HQJ03_023735 PF03061 Thioesterase superfamily HQJ03_023745 PF02632 BioY family HQJ03_023755 PF00483 Nucleotidyl transferase HQJ03_023760 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HQJ03_023760 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HQJ03_023760 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HQJ03_023760 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HQJ03_023765 PF02457 DisA bacterial checkpoint controller nucleotide-binding HQJ03_023765 PF10372 Bacterial membrane-spanning protein N-terminus HQJ03_023780 PF00892 EamA-like transporter family HQJ03_023785 PF01040 UbiA prenyltransferase family HQJ03_023790 PF00883 Cytosol aminopeptidase family, catalytic domain HQJ03_023790 PF02789 Cytosol aminopeptidase family, N-terminal domain HQJ03_023795 PF06725 3D domain HQJ03_023805 PF00293 NUDIX domain HQJ03_023805 PF13344 Haloacid dehalogenase-like hydrolase HQJ03_023810 PF07992 Pyridine nucleotide-disulphide oxidoreductase HQJ03_023815 PF07992 Pyridine nucleotide-disulphide oxidoreductase HQJ03_023825 PF06445 GyrI-like small molecule binding domain HQJ03_023840 PF04463 Protein of unknown function (DUF523) HQJ03_023850 PF01596 O-methyltransferase HQJ03_023860 PF01521 Iron-sulphur cluster biosynthesis HQJ03_023865 PF01678 Diaminopimelate epimerase HQJ03_023870 PF07293 Protein of unknown function (DUF1450) HQJ03_023875 PF07992 Pyridine nucleotide-disulphide oxidoreductase HQJ03_023885 PF00005 ABC transporter HQJ03_023885 PF03412 Peptidase C39 family HQJ03_023885 PF00664 ABC transporter transmembrane region HQJ03_023890 PF03649 Uncharacterised protein family (UPF0014) HQJ03_023895 PF08274 PhnA Zinc-Ribbon HQJ03_023895 PF03831 PhnA domain HQJ03_023940 PF13427 Domain of unknown function (DUF4111) HQJ03_023940 PF01909 Nucleotidyltransferase domain HQJ03_023945 PF07315 Protein of unknown function (DUF1462) HQJ03_023950 PF01106 NifU-like domain HQJ03_023965 PF04608 Phosphatidylglycerophosphatase A HQJ03_023985 PF11202 Phosphoribosyl transferase (PRTase) HQJ03_023985 PF15608 PELOTA RNA binding domain HQJ03_024000 PF02687 FtsX-like permease family HQJ03_024000 PF12704 MacB-like periplasmic core domain HQJ03_024000 PF00005 ABC transporter HQJ03_024005 PF02525 Flavodoxin-like fold HQJ03_024010 PF13344 Haloacid dehalogenase-like hydrolase HQJ03_024020 PF01934 Protein of unknown function DUF86 HQJ03_024025 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded HQJ03_024040 PF06265 Protein of unknown function (DUF1027) HQJ03_024045 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) HQJ03_024050 PF13411 MerR HTH family regulatory protein HQJ03_024050 PF07739 TipAS antibiotic-recognition domain HQJ03_024055 PF10086 YhfC intramembrane metalloprotease HQJ03_024075 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family HQJ03_024075 PF04055 Radical SAM superfamily HQJ03_024080 PF01551 Peptidase family M23 HQJ03_024085 PF09560 Sporulation protein YunB (Spo_YunB) HQJ03_024090 PF08827 Domain of unknown function (DUF1805) HQJ03_024095 PF02872 5'-nucleotidase, C-terminal domain HQJ03_024100 PF01458 Uncharacterized protein family (UPF0051) HQJ03_024105 PF01592 NifU-like N terminal domain HQJ03_024110 PF00266 Aminotransferase class-V HQJ03_024115 PF01458 Uncharacterized protein family (UPF0051) HQJ03_024120 PF00005 ABC transporter HQJ03_024125 PF03180 NLPA lipoprotein HQJ03_024130 PF03180 NLPA lipoprotein HQJ03_024135 PF00528 Binding-protein-dependent transport system inner membrane component HQJ03_024140 PF09383 NIL domain HQJ03_024140 PF00005 ABC transporter HQJ03_024150 PF00085 Thioredoxin HQJ03_024155 PF01751 Toprim domain HQJ03_024160 PF01597 Glycine cleavage H-protein HQJ03_024165 PF03960 ArsC family HQJ03_024185 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain HQJ03_024185 PF00056 lactate/malate dehydrogenase, NAD binding domain HQJ03_024205 PF13305 Tetracyclin repressor-like, C-terminal domain HQJ03_024205 PF00440 Bacterial regulatory proteins, tetR family HQJ03_024210 PF00753 Metallo-beta-lactamase superfamily HQJ03_024215 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HQJ03_024215 PF02770 Acyl-CoA dehydrogenase, middle domain HQJ03_024215 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HQJ03_024220 PF02803 Thiolase, C-terminal domain HQJ03_024220 PF00108 Thiolase, N-terminal domain HQJ03_024225 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain HQJ03_024225 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HQJ03_024225 PF00378 Enoyl-CoA hydratase/isomerase HQJ03_024230 PF14115 YuzL-like protein HQJ03_024235 PF00768 D-alanyl-D-alanine carboxypeptidase HQJ03_024235 PF07943 Penicillin-binding protein 5, C-terminal domain HQJ03_024240 PF01619 Proline dehydrogenase HQJ03_024245 PF10835 Protein of unknown function (DUF2573) HQJ03_024250 PF01910 Thiamine-binding protein HQJ03_024255 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HQJ03_024255 PF00672 HAMP domain HQJ03_024255 PF02743 Cache domain HQJ03_024270 PF07690 Major Facilitator Superfamily HQJ03_024275 PF13520 Amino acid permease HQJ03_024290 PF02096 60Kd inner membrane protein HQJ03_024300 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) HQJ03_024300 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 HQJ03_024335 PF09335 SNARE associated Golgi protein HQJ03_024345 PF17969 L,D-transpeptidase C-terminal domain HQJ03_024345 PF03734 L,D-transpeptidase catalytic domain HQJ03_024350 PF00072 Response regulator receiver domain HQJ03_024350 PF00486 Transcriptional regulatory protein, C terminal HQJ03_024355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQJ03_024355 PF00512 His Kinase A (phospho-acceptor) domain HQJ03_024355 PF00989 PAS fold HQJ03_024355 PF16736 Single Cache-like HQJ03_024370 PF09334 tRNA synthetases class I (M) HQJ03_024370 PF08264 Anticodon-binding domain of tRNA HQJ03_024380 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HQJ03_024380 PF00672 HAMP domain HQJ03_024380 PF02743 Cache domain HQJ03_024385 PF02743 Cache domain HQJ03_024385 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HQJ03_024385 PF00672 HAMP domain HQJ03_024390 PF01883 Iron-sulfur cluster assembly protein HQJ03_024395 PF07504 Fungalysin/Thermolysin Propeptide Motif HQJ03_024395 PF03413 Peptidase propeptide and YPEB domain HQJ03_024395 PF01447 Thermolysin metallopeptidase, catalytic domain HQJ03_024395 PF02868 Thermolysin metallopeptidase, alpha-helical domain HQJ03_024400 PF17954 Quercetinase C-terminal cupin domain HQJ03_024400 PF02678 Pirin HQJ03_024405 PF01047 MarR family HQJ03_024415 PF09335 SNARE associated Golgi protein HQJ03_024420 PF00999 Sodium/hydrogen exchanger family HQJ03_024425 PF02080 TrkA-C domain HQJ03_024430 PF01235 Sodium:alanine symporter family HQJ03_024435 PF00210 Ferritin-like domain HQJ03_024450 PF03641 Possible lysine decarboxylase HQJ03_024460 PF00210 Ferritin-like domain HQJ03_024465 PF07786 Protein of unknown function (DUF1624) HQJ03_024465 PF04235 Protein of unknown function (DUF418) HQJ03_024470 PF07662 Na+ dependent nucleoside transporter C-terminus HQJ03_024470 PF01773 Na+ dependent nucleoside transporter N-terminus HQJ03_024475 PF01773 Na+ dependent nucleoside transporter N-terminus HQJ03_024475 PF07662 Na+ dependent nucleoside transporter C-terminus HQJ03_024480 PF01235 Sodium:alanine symporter family HQJ03_024485 PF01235 Sodium:alanine symporter family HQJ03_024490 PF13460 NAD(P)H-binding HQJ03_024505 PF00248 Aldo/keto reductase family HQJ03_024510 PF07690 Major Facilitator Superfamily HQJ03_024515 PF01638 HxlR-like helix-turn-helix HQJ03_024520 PF07849 Protein of unknown function (DUF1641) HQJ03_024525 PF07992 Pyridine nucleotide-disulphide oxidoreductase HQJ03_024530 PF01479 S4 domain HQJ03_024530 PF00579 tRNA synthetases class I (W and Y) HQJ03_024535 PF01565 FAD binding domain HQJ03_024535 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain HQJ03_024555 PF02537 CrcB-like protein, Camphor Resistance (CrcB) HQJ03_024560 PF02537 CrcB-like protein, Camphor Resistance (CrcB) HQJ03_024575 PF07690 Major Facilitator Superfamily HQJ03_024580 PF00005 ABC transporter HQJ03_024580 PF12848 ABC transporter HQJ03_024585 PF13302 Acetyltransferase (GNAT) domain HQJ03_024590 PF06146 Phosphate-starvation-inducible E HQJ03_024620 PF01289 Thiol-activated cytolysin HQJ03_024620 PF17440 Thiol-activated cytolysin beta sandwich domain HQJ03_024625 PF00005 ABC transporter HQJ03_024630 PF01032 FecCD transport family HQJ03_024635 PF01032 FecCD transport family HQJ03_024645 PF00486 Transcriptional regulatory protein, C terminal HQJ03_024645 PF00072 Response regulator receiver domain HQJ03_024660 PF00440 Bacterial regulatory proteins, tetR family HQJ03_024670 PF01668 SmpB protein HQJ03_024675 PF17876 Cold shock domain HQJ03_024675 PF08206 Ribonuclease B OB domain HQJ03_024675 PF00773 RNB domain HQJ03_024675 PF00575 S1 RNA binding domain HQJ03_024680 PF12146 Serine aminopeptidase, S33 HQJ03_024685 PF03840 Preprotein translocase SecG subunit HQJ03_024690 PF04172 LrgB-like family HQJ03_024695 PF03788 LrgA family HQJ03_024700 PF01156 Inosine-uridine preferring nucleoside hydrolase HQJ03_024705 PF00113 Enolase, C-terminal TIM barrel domain HQJ03_024705 PF03952 Enolase, N-terminal domain HQJ03_024710 PF06415 BPG-independent PGAM N-terminus (iPGM_N) HQJ03_024710 PF01676 Metalloenzyme superfamily HQJ03_024715 PF00121 Triosephosphate isomerase HQJ03_024720 PF00162 Phosphoglycerate kinase HQJ03_024725 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HQJ03_024725 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HQJ03_024730 PF04198 Putative sugar-binding domain HQJ03_024740 PF00309 Sigma-54 factor, Activator interacting domain (AID) HQJ03_024740 PF04963 Sigma-54 factor, core binding domain HQJ03_024740 PF04552 Sigma-54, DNA binding domain HQJ03_024750 PF13732 Domain of unknown function (DUF4162) HQJ03_024750 PF00005 ABC transporter HQJ03_024755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQJ03_024755 PF07730 Histidine kinase HQJ03_024760 PF00196 Bacterial regulatory proteins, luxR family HQJ03_024760 PF00072 Response regulator receiver domain HQJ03_024780 PF03862 SpoVAC/SpoVAEB sporulation membrane protein HQJ03_024785 PF07451 Stage V sporulation protein AD (SpoVAD) HQJ03_024790 PF03862 SpoVAC/SpoVAEB sporulation membrane protein HQJ03_024800 PF04239 Protein of unknown function (DUF421) HQJ03_024805 PF00574 Clp protease HQJ03_024810 PF00381 PTS HPr component phosphorylation site HQJ03_024815 PF02650 WhiA C-terminal HTH domain HQJ03_024815 PF14527 WhiA LAGLIDADG-like domain HQJ03_024815 PF10298 WhiA N-terminal LAGLIDADG-like domain HQJ03_024820 PF01933 Uncharacterised protein family UPF0052 HQJ03_024825 PF03668 P-loop ATPase protein family HQJ03_024830 PF00293 NUDIX domain HQJ03_024840 PF07992 Pyridine nucleotide-disulphide oxidoreductase HQJ03_024850 PF14602 Hexapeptide repeat of succinyl-transferase HQJ03_024855 PF13419 Haloacid dehalogenase-like hydrolase HQJ03_024860 PF01790 Prolipoprotein diacylglyceryl transferase HQJ03_024865 PF07475 HPr Serine kinase C-terminal domain HQJ03_024865 PF02603 HPr Serine kinase N terminus HQJ03_024870 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV HQJ03_024880 PF00005 ABC transporter HQJ03_024880 PF17755 UvrA DNA-binding domain HQJ03_024880 PF17760 UvrA interaction domain HQJ03_024885 PF00271 Helicase conserved C-terminal domain HQJ03_024885 PF04851 Type III restriction enzyme, res subunit HQJ03_024885 PF12344 Ultra-violet resistance protein B HQJ03_024885 PF17757 UvrB interaction domain HQJ03_024885 PF02151 UvrB/uvrC motif HQJ03_024900 PF07739 TipAS antibiotic-recognition domain HQJ03_024900 PF13411 MerR HTH family regulatory protein HQJ03_024915 PF03601 Conserved hypothetical protein 698 HQJ03_024920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HQJ03_024920 PF03466 LysR substrate binding domain HQJ03_024925 PF09278 MerR, DNA binding HQJ03_024925 PF00376 MerR family regulatory protein HQJ03_024930 PF03358 NADPH-dependent FMN reductase HQJ03_024935 PF16326 ABC transporter C-terminal domain HQJ03_024935 PF12848 ABC transporter HQJ03_024935 PF00005 ABC transporter HQJ03_024940 PF01906 Putative heavy-metal-binding HQJ03_024945 PF00005 ABC transporter HQJ03_024945 PF00664 ABC transporter transmembrane region HQJ03_024950 PF07859 alpha/beta hydrolase fold HQJ03_024955 PF00797 N-acetyltransferase HQJ03_024960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HQJ03_024960 PF03466 LysR substrate binding domain HQJ03_024965 PF17820 PDZ domain HQJ03_024970 PF01471 Putative peptidoglycan binding domain HQJ03_024970 PF03572 Peptidase family S41 HQJ03_024970 PF17820 PDZ domain HQJ03_024975 PF18075 FtsX extracellular domain HQJ03_024975 PF02687 FtsX-like permease family HQJ03_024980 PF00005 ABC transporter HQJ03_024985 PF13442 Cytochrome C oxidase, cbb3-type, subunit III HQJ03_024995 PF07516 SecA Wing and Scaffold domain HQJ03_024995 PF07517 SecA DEAD-like domain HQJ03_024995 PF02810 SEC-C motif HQJ03_024995 PF01043 SecA preprotein cross-linking domain HQJ03_025000 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein HQJ03_025000 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus HQJ03_025005 PF00313 'Cold-shock' DNA-binding domain HQJ03_025015 PF00271 Helicase conserved C-terminal domain HQJ03_025015 PF04851 Type III restriction enzyme, res subunit HQJ03_025020 PF00877 NlpC/P60 family HQJ03_025025 PF01638 HxlR-like helix-turn-helix HQJ03_025030 PF02645 Uncharacterised protein, DegV family COG1307 HQJ03_025035 PF01205 Uncharacterized protein family UPF0029 HQJ03_025035 PF09186 Domain of unknown function (DUF1949) HQJ03_025040 PF03816 Cell envelope-related transcriptional attenuator domain HQJ03_025045 PF02350 UDP-N-acetylglucosamine 2-epimerase HQJ03_025050 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain HQJ03_025050 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain HQJ03_025050 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain HQJ03_025055 PF00953 Glycosyl transferase family 4 HQJ03_025060 PF01522 Polysaccharide deacetylase HQJ03_025065 PF03610 PTS system fructose IIA component HQJ03_025065 PF00874 PRD domain HQJ03_025065 PF00158 Sigma-54 interaction domain HQJ03_025075 PF02417 Chromate transporter HQJ03_025080 PF04794 YdjC-like protein HQJ03_025085 PF11975 Family 4 glycosyl hydrolase C-terminal domain HQJ03_025085 PF02056 Family 4 glycosyl hydrolase HQJ03_025090 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit HQJ03_025095 PF02378 Phosphotransferase system, EIIC HQJ03_025100 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HQJ03_025110 PF02675 S-adenosylmethionine decarboxylase HQJ03_025115 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit HQJ03_025120 PF02378 Phosphotransferase system, EIIC HQJ03_025125 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HQJ03_025130 PF00375 Sodium:dicarboxylate symporter family HQJ03_025150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HQJ03_025150 PF03466 LysR substrate binding domain HQJ03_025165 PF01654 Cytochrome bd terminal oxidase subunit I HQJ03_025170 PF02322 Cytochrome bd terminal oxidase subunit II HQJ03_025175 PF02040 Arsenical pump membrane protein HQJ03_025180 PF01964 Radical SAM ThiC family HQJ03_025180 PF13667 ThiC-associated domain HQJ03_025185 PF02652 L-lactate permease HQJ03_025195 PF09988 Uncharacterized metal-binding protein (DUF2227) HQJ03_025205 PF00884 Sulfatase HQJ03_025210 PF01063 Amino-transferase class IV HQJ03_025215 PF01476 LysM domain HQJ03_025215 PF00877 NlpC/P60 family HQJ03_025220 PF07662 Na+ dependent nucleoside transporter C-terminus HQJ03_025220 PF01773 Na+ dependent nucleoside transporter N-terminus HQJ03_025235 PF02028 BCCT, betaine/carnitine/choline family transporter HQJ03_025240 PF01476 LysM domain HQJ03_025240 PF06725 3D domain HQJ03_025265 PF04434 SWIM zinc finger HQJ03_025270 PF00176 SNF2 family N-terminal domain HQJ03_025270 PF12419 SNF2 Helicase protein HQJ03_025270 PF00271 Helicase conserved C-terminal domain HQJ03_025300 PF04545 Sigma-70, region 4 HQJ03_025300 PF04542 Sigma-70 region 2 HQJ03_025305 PF04893 Yip1 domain HQJ03_025310 PF12704 MacB-like periplasmic core domain HQJ03_025310 PF02687 FtsX-like permease family HQJ03_025315 PF00005 ABC transporter HQJ03_025325 PF07690 Major Facilitator Superfamily HQJ03_025340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQJ03_025340 PF00989 PAS fold HQJ03_025340 PF00512 His Kinase A (phospho-acceptor) domain HQJ03_025340 PF16736 Single Cache-like HQJ03_025345 PF00486 Transcriptional regulatory protein, C terminal HQJ03_025345 PF00072 Response regulator receiver domain HQJ03_025350 PF16363 GDP-mannose 4,6 dehydratase HQJ03_025355 PF16363 GDP-mannose 4,6 dehydratase HQJ03_025365 PF03816 Cell envelope-related transcriptional attenuator domain HQJ03_025375 PF00534 Glycosyl transferases group 1 HQJ03_025375 PF13439 Glycosyltransferase Family 4 HQJ03_025380 PF13439 Glycosyltransferase Family 4 HQJ03_025380 PF00534 Glycosyl transferases group 1 HQJ03_025400 PF13439 Glycosyltransferase Family 4 HQJ03_025400 PF00534 Glycosyl transferases group 1 HQJ03_025410 PF03033 Glycosyltransferase family 28 N-terminal domain HQJ03_025410 PF04101 Glycosyltransferase family 28 C-terminal domain HQJ03_025415 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain HQJ03_025415 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain HQJ03_025415 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain HQJ03_025420 PF02397 Bacterial sugar transferase HQJ03_025425 PF00483 Nucleotidyl transferase HQJ03_025435 PF13614 AAA domain HQJ03_025440 PF02706 Chain length determinant protein HQJ03_025440 PF13807 G-rich domain on putative tyrosine kinase HQJ03_025445 PF13614 AAA domain HQJ03_025450 PF07977 FabA-like domain HQJ03_025460 PF12116 Stage III sporulation protein D HQJ03_025470 PF01551 Peptidase family M23 HQJ03_025480 PF00005 ABC transporter HQJ03_025485 PF04397 LytTr DNA-binding domain HQJ03_025485 PF00072 Response regulator receiver domain HQJ03_025490 PF08486 Stage II sporulation protein HQJ03_025495 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HQJ03_025505 PF06612 Protein of unknown function (DUF1146) HQJ03_025510 PF00361 Proton-conducting membrane transporter HQJ03_025515 PF00361 Proton-conducting membrane transporter HQJ03_025520 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus HQJ03_025520 PF00361 Proton-conducting membrane transporter HQJ03_025520 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus HQJ03_025525 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L HQJ03_025530 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 HQJ03_025540 PF00146 NADH dehydrogenase HQJ03_025545 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit HQJ03_025550 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit HQJ03_025555 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit HQJ03_025560 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 HQJ03_025565 PF00990 Diguanylate cyclase, GGDEF domain HQJ03_025565 PF03707 Bacterial signalling protein N terminal repeat HQJ03_025565 PF00563 EAL domain HQJ03_025580 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain HQJ03_025580 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain HQJ03_025585 PF02874 ATP synthase alpha/beta family, beta-barrel domain HQJ03_025585 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HQJ03_025590 PF00231 ATP synthase HQJ03_025595 PF02874 ATP synthase alpha/beta family, beta-barrel domain HQJ03_025595 PF00306 ATP synthase alpha/beta chain, C terminal domain HQJ03_025595 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HQJ03_025600 PF00213 ATP synthase delta (OSCP) subunit HQJ03_025605 PF00430 ATP synthase B/B' CF(0) HQJ03_025610 PF00137 ATP synthase subunit C HQJ03_025615 PF00119 ATP synthase A chain HQJ03_025620 PF03899 ATP synthase I chain HQJ03_025640 PF00464 Serine hydroxymethyltransferase HQJ03_025645 PF04260 Protein of unknown function (DUF436) HQJ03_025650 PF02502 Ribose/Galactose Isomerase HQJ03_025655 PF01451 Low molecular weight phosphotyrosine protein phosphatase HQJ03_025660 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 HQJ03_025665 PF07681 DoxX HQJ03_025670 PF01613 Flavin reductase like domain HQJ03_025680 PF02659 Putative manganese efflux pump HQJ03_025685 PF03481 Putative GTP-binding controlling metal-binding HQJ03_025685 PF01300 Telomere recombination HQJ03_025695 PF09551 Stage II sporulation protein R (spore_II_R) HQJ03_025700 PF17827 PrmC N-terminal domain HQJ03_025700 PF13847 Methyltransferase domain HQJ03_025705 PF03462 PCRF domain HQJ03_025705 PF00472 RF-1 domain HQJ03_025710 PF00265 Thymidine kinase HQJ03_025715 PF01197 Ribosomal protein L31 HQJ03_025720 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HQJ03_025720 PF07498 Rho termination factor, N-terminal domain HQJ03_025720 PF07497 Rho termination factor, RNA-binding domain HQJ03_025725 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded HQJ03_025730 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HQJ03_025735 PF01116 Fructose-bisphosphate aldolase class-II HQJ03_025740 PF00072 Response regulator receiver domain HQJ03_025745 PF10740 Domain of unknown function (DUF2529) HQJ03_025750 PF06418 CTP synthase N-terminus HQJ03_025750 PF00117 Glutamine amidotransferase class-I HQJ03_025755 PF05066 HB1, ASXL, restriction endonuclease HTH domain HQJ03_025765 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HQJ03_025765 PF02770 Acyl-CoA dehydrogenase, middle domain HQJ03_025765 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HQJ03_025770 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HQJ03_025770 PF02770 Acyl-CoA dehydrogenase, middle domain HQJ03_025770 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HQJ03_025775 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HQJ03_025775 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain HQJ03_025780 PF02803 Thiolase, C-terminal domain HQJ03_025780 PF00108 Thiolase, N-terminal domain HQJ03_025785 PF02754 Cysteine-rich domain HQJ03_025785 PF13183 4Fe-4S dicluster domain HQJ03_025790 PF13091 PLD-like domain HQJ03_025795 PF03851 UV-endonuclease UvdE HQJ03_025800 PF00563 EAL domain HQJ03_025800 PF00990 Diguanylate cyclase, GGDEF domain HQJ03_025800 PF03707 Bacterial signalling protein N terminal repeat HQJ03_025815 PF07504 Fungalysin/Thermolysin Propeptide Motif HQJ03_025815 PF02868 Thermolysin metallopeptidase, alpha-helical domain HQJ03_025815 PF03413 Peptidase propeptide and YPEB domain HQJ03_025815 PF01447 Thermolysin metallopeptidase, catalytic domain HQJ03_025820 PF00196 Bacterial regulatory proteins, luxR family HQJ03_025820 PF00072 Response regulator receiver domain HQJ03_025825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQJ03_025825 PF07730 Histidine kinase HQJ03_025835 PF00005 ABC transporter HQJ03_025840 PF00557 Metallopeptidase family M24 HQJ03_025850 PF02225 PA domain HQJ03_025850 PF04389 Peptidase family M28 HQJ03_025875 PF03485 Arginyl tRNA synthetase N terminal domain HQJ03_025875 PF05746 DALR anticodon binding domain HQJ03_025875 PF00750 tRNA synthetases class I (R) HQJ03_025880 PF09148 Domain of unknown function (DUF1934) HQJ03_025885 PF02016 LD-carboxypeptidase N-terminal domain HQJ03_025885 PF17676 LD-carboxypeptidase C-terminal domain HQJ03_025900 PF00491 Arginase family HQJ03_025905 PF17284 Spermidine synthase tetramerisation domain HQJ03_025910 PF07690 Major Facilitator Superfamily HQJ03_025915 PF13411 MerR HTH family regulatory protein HQJ03_025920 PF03009 Glycerophosphoryl diester phosphodiesterase family HQJ03_025925 PF00912 Transglycosylase HQJ03_025925 PF00905 Penicillin binding protein transpeptidase domain HQJ03_025930 PF08741 YwhD family HQJ03_025935 PF02163 Peptidase family M50 HQJ03_025940 PF01361 Tautomerase enzyme HQJ03_025945 PF01966 HD domain HQJ03_025950 PF01497 Periplasmic binding protein HQJ03_025955 PF00005 ABC transporter HQJ03_025960 PF01032 FecCD transport family HQJ03_025965 PF01032 FecCD transport family HQJ03_025970 PF07293 Protein of unknown function (DUF1450) HQJ03_025980 PF03099 Biotin/lipoate A/B protein ligase family HQJ03_025985 PF01515 Phosphate acetyl/butaryl transferase HQJ03_025990 PF06778 Chlorite dismutase HQJ03_025995 PF00768 D-alanyl-D-alanine carboxypeptidase HQJ03_025995 PF07943 Penicillin-binding protein 5, C-terminal domain HQJ03_026000 PF07486 Cell Wall Hydrolase HQJ03_026005 PF09671 Spore coat protein (Spore_GerQ) HQJ03_026010 PF04241 Protein of unknown function (DUF423) HQJ03_026020 PF02254 TrkA-N domain HQJ03_026020 PF07885 Ion channel HQJ03_026025 PF00860 Permease family HQJ03_026035 PF12823 Domain of unknown function (DUF3817) HQJ03_026040 PF03167 Uracil DNA glycosylase superfamily HQJ03_026045 PF12679 ABC-2 family transporter protein HQJ03_026050 PF00005 ABC transporter HQJ03_026055 PF13472 GDSL-like Lipase/Acylhydrolase family HQJ03_026060 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family HQJ03_026060 PF00356 Bacterial regulatory proteins, lacI family HQJ03_026070 PF00742 Homoserine dehydrogenase HQJ03_026070 PF03447 Homoserine dehydrogenase, NAD binding domain HQJ03_026070 PF01842 ACT domain HQJ03_026075 PF04204 Homoserine O-succinyltransferase HQJ03_026080 PF01053 Cys/Met metabolism PLP-dependent enzyme HQJ03_026090 PF13419 Haloacid dehalogenase-like hydrolase HQJ03_026095 PF00027 Cyclic nucleotide-binding domain HQJ03_026100 PF02525 Flavodoxin-like fold HQJ03_026105 PF00196 Bacterial regulatory proteins, luxR family HQJ03_026105 PF00072 Response regulator receiver domain HQJ03_026110 PF07730 Histidine kinase HQJ03_026110 PF13185 GAF domain HQJ03_026115 PF08543 Phosphomethylpyrimidine kinase HQJ03_026120 PF07694 5TMR of 5TMR-LYT HQJ03_026120 PF00990 Diguanylate cyclase, GGDEF domain HQJ03_026125 PF04328 Selenoprotein, putative HQJ03_026130 PF02554 Carbon starvation protein CstA HQJ03_026130 PF13722 5TM C-terminal transporter carbon starvation CstA HQJ03_026135 PF04397 LytTr DNA-binding domain HQJ03_026135 PF00072 Response regulator receiver domain HQJ03_026140 PF07690 Major Facilitator Superfamily HQJ03_026145 PF03808 Glycosyl transferase WecB/TagA/CpsF family HQJ03_026150 PF13439 Glycosyltransferase Family 4 HQJ03_026150 PF00534 Glycosyl transferases group 1 HQJ03_026160 PF03458 UPF0126 domain HQJ03_026165 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HQJ03_026175 PF03061 Thioesterase superfamily HQJ03_026180 PF00535 Glycosyl transferase family 2 HQJ03_026190 PF00535 Glycosyl transferase family 2 HQJ03_026200 PF09586 Bacterial membrane protein YfhO HQJ03_026205 PF00535 Glycosyl transferase family 2 HQJ03_026210 PF00005 ABC transporter HQJ03_026210 PF12848 ABC transporter HQJ03_026215 PF00440 Bacterial regulatory proteins, tetR family HQJ03_026220 PF00873 AcrB/AcrD/AcrF family HQJ03_026225 PF01641 SelR domain HQJ03_026235 PF01594 AI-2E family transporter HQJ03_026240 PF04172 LrgB-like family HQJ03_026245 PF03788 LrgA family HQJ03_026250 PF00072 Response regulator receiver domain HQJ03_026250 PF04397 LytTr DNA-binding domain HQJ03_026255 PF07694 5TMR of 5TMR-LYT HQJ03_026255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQJ03_026255 PF06580 Histidine kinase HQJ03_026255 PF13492 GAF domain HQJ03_026260 PF07690 Major Facilitator Superfamily HQJ03_026265 PF02028 BCCT, betaine/carnitine/choline family transporter HQJ03_026270 PF02898 Nitric oxide synthase, oxygenase domain HQJ03_026275 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain HQJ03_026275 PF02777 Iron/manganese superoxide dismutases, C-terminal domain HQJ03_026285 PF02293 AmiS/UreI family transporter HQJ03_026290 PF16363 GDP-mannose 4,6 dehydratase HQJ03_026295 PF03006 Haemolysin-III related HQJ03_026305 PF00271 Helicase conserved C-terminal domain HQJ03_026305 PF00270 DEAD/DEAH box helicase HQJ03_026305 PF03880 DbpA RNA binding domain HQJ03_026310 PF00478 IMP dehydrogenase / GMP reductase domain HQJ03_026315 PF01432 Peptidase family M3 HQJ03_026315 PF08439 Oligopeptidase F HQJ03_026325 PF13188 PAS domain HQJ03_026325 PF00989 PAS fold HQJ03_026325 PF00512 His Kinase A (phospho-acceptor) domain HQJ03_026325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQJ03_026325 PF13426 PAS domain HQJ03_026330 PF02590 Predicted SPOUT methyltransferase HQJ03_026340 PF13180 PDZ domain HQJ03_026345 PF00753 Metallo-beta-lactamase superfamily HQJ03_026350 PF09648 YycH protein HQJ03_026360 PF00672 HAMP domain HQJ03_026360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQJ03_026360 PF00512 His Kinase A (phospho-acceptor) domain HQJ03_026360 PF13426 PAS domain HQJ03_026365 PF00072 Response regulator receiver domain HQJ03_026365 PF00486 Transcriptional regulatory protein, C terminal HQJ03_026390 PF00709 Adenylosuccinate synthetase HQJ03_026395 PF03796 DnaB-like helicase C terminal domain HQJ03_026395 PF00772 DnaB-like helicase N terminal domain HQJ03_026400 PF03948 Ribosomal protein L9, C-terminal domain HQJ03_026400 PF01281 Ribosomal protein L9, N-terminal domain HQJ03_026405 PF01368 DHH family HQJ03_026405 PF02272 DHHA1 domain HQJ03_026410 PF09991 Predicted membrane protein (DUF2232) HQJ03_026415 PF01084 Ribosomal protein S18 HQJ03_026420 PF00436 Single-strand binding protein family HQJ03_026425 PF01250 Ribosomal protein S6 HQJ03_026430 PF06071 Protein of unknown function (DUF933) HQJ03_026430 PF01926 50S ribosome-binding GTPase HQJ03_026435 PF06107 Bacterial protein of unknown function (DUF951) HQJ03_026440 PF00924 Mechanosensitive ion channel HQJ03_026445 PF06866 Protein of unknown function (DUF1256) HQJ03_026450 PF17762 HTH domain found in ParB protein HQJ03_026450 PF02195 ParB-like nuclease domain HQJ03_026455 PF13614 AAA domain HQJ03_026460 PF02195 ParB-like nuclease domain HQJ03_026460 PF17762 HTH domain found in ParB protein HQJ03_026465 PF02527 rRNA small subunit methyltransferase G HQJ03_026470 PF01134 Glucose inhibited division protein A HQJ03_026470 PF13932 GidA associated domain HQJ03_026475 PF01926 50S ribosome-binding GTPase HQJ03_026475 PF12631 MnmE helical domain HQJ03_026475 PF10396 GTP-binding protein TrmE N-terminus HQJ03_026480 PF01424 R3H domain HQJ03_026480 PF14804 Jag N-terminus HQJ03_026485 PF02096 60Kd inner membrane protein HQJ03_026490 PF00825 Ribonuclease P HQJ03_026495 PF00468 Ribosomal protein L34 HQJ03_026500 PF00990 Diguanylate cyclase, GGDEF domain HQJ03_026500 PF03707 Bacterial signalling protein N terminal repeat HQJ03_026500 PF00563 EAL domain HQJ03_026530 PF11799 impB/mucB/samB family C-terminal domain HQJ03_026530 PF00817 impB/mucB/samB family HQJ03_026530 PF11798 IMS family HHH motif HQJ03_026535 PF01595 Cyclin M transmembrane N-terminal domain HQJ03_026535 PF03471 Transporter associated domain HQJ03_026535 PF00571 CBS domain HQJ03_026560 PF00553 Cellulose binding domain HQJ03_026560 PF00704 Glycosyl hydrolases family 18 HQJ03_026560 PF00041 Fibronectin type III domain HQJ03_026590 PF02743 Cache domain HQJ03_026590 PF00672 HAMP domain HQJ03_026590 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HQJ03_026600 PF18801 response regulator aspartate phosphatase H, N terminal HQJ03_026605 PF16363 GDP-mannose 4,6 dehydratase HQJ03_026610 PF01370 NAD dependent epimerase/dehydratase family HQJ03_026620 PF00483 Nucleotidyl transferase HQJ03_026640 PF03323 Bacillus/Clostridium GerA spore germination protein HQJ03_026650 PF18416 N-acetylglucosamine binding protein domain 2 HQJ03_026650 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading HQJ03_026675 PF01526 Tn3 transposase DDE domain HQJ03_026675 PF13700 Domain of unknown function (DUF4158) HQJ03_026715 PF00589 Phage integrase family HQJ03_026715 PF13495 Phage integrase, N-terminal SAM-like domain HQJ03_026720 PF00440 Bacterial regulatory proteins, tetR family HQJ03_026745 PF03965 Penicillinase repressor HQJ03_026760 PF03448 MgtE intracellular N domain HQJ03_026760 PF01769 Divalent cation transporter HQJ03_026760 PF00571 CBS domain HQJ03_026765 PF01098 Cell cycle protein HQJ03_026770 PF01522 Polysaccharide deacetylase HQJ03_026775 PF00355 Rieske [2Fe-2S] domain HQJ03_026790 PF07859 alpha/beta hydrolase fold HQJ03_026800 PF04239 Protein of unknown function (DUF421) HQJ03_026825 PF01609 Transposase DDE domain HQJ03_026830 PF02567 Phenazine biosynthesis-like protein HQJ03_026845 PF00882 Zinc dependent phospholipase C HQJ03_026865 PF00989 PAS fold HQJ03_026865 PF16736 Single Cache-like HQJ03_026865 PF00512 His Kinase A (phospho-acceptor) domain HQJ03_026865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQJ03_026870 PF00486 Transcriptional regulatory protein, C terminal HQJ03_026870 PF00072 Response regulator receiver domain HQJ03_026885 PF00005 ABC transporter HQJ03_026890 PF02687 FtsX-like permease family HQJ03_026895 PF00269 Small, acid-soluble spore proteins, alpha/beta type HQJ03_026905 PF00682 HMGL-like HQJ03_026915 PF04284 Protein of unknown function (DUF441) HQJ03_026920 PF00581 Rhodanese-like domain HQJ03_026920 PF00899 ThiF family HQJ03_026925 PF00899 ThiF family HQJ03_026935 PF00269 Small, acid-soluble spore proteins, alpha/beta type HQJ03_026945 PF00210 Ferritin-like domain HQJ03_026950 PF18496 Collagenase G catalytic helper subdomain HQJ03_026950 PF01752 Collagenase HQJ03_026950 PF08453 Peptidase family M9 N-terminal HQJ03_026965 PF01381 Helix-turn-helix HQJ03_026995 PF00269 Small, acid-soluble spore proteins, alpha/beta type HQJ03_027010 PF07690 Major Facilitator Superfamily HQJ03_027015 PF01047 MarR family HQJ03_027020 PF01047 MarR family HQJ03_027025 PF00067 Cytochrome P450 HQJ03_027030 PF16715 Cyclodipeptide synthase HQJ03_027035 PF12729 Four helix bundle sensory module for signal transduction HQJ03_027035 PF00672 HAMP domain HQJ03_027035 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HQJ03_027050 PF01609 Transposase DDE domain HQJ03_027060 PF05857 TraX protein HQJ03_027065 PF02687 FtsX-like permease family HQJ03_027070 PF00005 ABC transporter HQJ03_027075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQJ03_027080 PF00486 Transcriptional regulatory protein, C terminal HQJ03_027080 PF00072 Response regulator receiver domain HQJ03_027100 PF07690 Major Facilitator Superfamily HQJ03_027105 PF16859 Tetracyclin repressor-like, C-terminal domain HQJ03_027105 PF00440 Bacterial regulatory proteins, tetR family HQJ03_027145 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading HQJ03_027145 PF18416 N-acetylglucosamine binding protein domain 2 HQJ03_027165 PF04371 Porphyromonas-type peptidyl-arginine deiminase HQJ03_027190 PF01037 Lrp/AsnC ligand binding domain HQJ03_027230 PF00082 Subtilase family HQJ03_027255 PF02687 FtsX-like permease family HQJ03_027260 PF00005 ABC transporter HQJ03_027290 PF04308 Ribonuclease H-like HQJ03_027305 PF01510 N-acetylmuramoyl-L-alanine amidase HQJ03_027305 PF01476 LysM domain HQJ03_027305 PF01471 Putative peptidoglycan binding domain HQJ03_027310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HQJ03_027310 PF03466 LysR substrate binding domain HQJ03_027315 PF00892 EamA-like transporter family HQJ03_027410 PF07282 Putative transposase DNA-binding domain HQJ03_027410 PF01385 Probable transposase HQJ03_027410 PF12323 Helix-turn-helix domain HQJ03_027510 PF14470 Bacterial PH domain HQJ03_027580 PF01609 Transposase DDE domain HQJ03_027630 PF12323 Helix-turn-helix domain HQJ03_027630 PF01385 Probable transposase HQJ03_027630 PF07282 Putative transposase DNA-binding domain HQJ03_027675 PF10502 Signal peptidase, peptidase S26 HQJ03_027735 PF05163 DinB family HQJ03_027755 PF00561 alpha/beta hydrolase fold HQJ03_027765 PF00392 Bacterial regulatory proteins, gntR family HQJ03_027765 PF07729 FCD domain HQJ03_027770 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HQJ03_027770 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HQJ03_027775 PF02447 GntP family permease HQJ03_027780 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain HQJ03_027780 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HQJ03_027820 PF00877 NlpC/P60 family HQJ03_027870 PF03412 Peptidase C39 family HQJ03_027870 PF00005 ABC transporter HQJ03_027870 PF00664 ABC transporter transmembrane region HQJ03_028015 PF01471 Putative peptidoglycan binding domain HQJ03_028015 PF07486 Cell Wall Hydrolase HQJ03_028030 PF01580 FtsK/SpoIIIE family HQJ03_028030 PF17854 FtsK alpha domain HQJ03_028030 PF09397 Ftsk gamma domain HQJ03_028040 PF07282 Putative transposase DNA-binding domain HQJ03_028040 PF01385 Probable transposase HQJ03_028040 PF12323 Helix-turn-helix domain HQJ03_028045 PF01757 Acyltransferase family HQJ03_028050 PF13302 Acetyltransferase (GNAT) domain HQJ03_028100 PF00672 HAMP domain HQJ03_028100 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HQJ03_028105 PF00269 Small, acid-soluble spore proteins, alpha/beta type HQJ03_028135 PF01022 Bacterial regulatory protein, arsR family HQJ03_028145 PF01554 MatE HQJ03_028150 PF00717 Peptidase S24-like HQJ03_028150 PF01726 LexA DNA binding domain HQJ03_028220 PF14550 Putative phage serine protease XkdF HQJ03_028360 PF15493 Domain of unknown function, YrpD HQJ03_028365 PF18801 response regulator aspartate phosphatase H, N terminal HQJ03_028430 PF13391 HNH endonuclease HQJ03_028435 PF00293 NUDIX domain HQJ03_028450 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) HQJ03_028470 PF14659 Phage integrase, N-terminal SAM-like domain HQJ03_028470 PF00589 Phage integrase family HQJ03_028520 PF00580 UvrD/REP helicase N-terminal domain HQJ03_028520 PF13361 UvrD-like helicase C-terminal domain HQJ03_028530 PF18273 Type III R-M EcoP15I C-terminal domain HQJ03_028530 PF01555 DNA methylase HQJ03_028535 PF04851 Type III restriction enzyme, res subunit HQJ03_028535 PF08774 VRR-NUC domain HQJ03_028545 PF13610 DDE domain HQJ03_028575 PF04002 RadC-like JAB domain HQJ03_028610 PF13847 Methyltransferase domain HQJ03_028610 PF00069 Protein kinase domain HQJ03_028615 PF00378 Enoyl-CoA hydratase/isomerase HQJ03_028620 PF00535 Glycosyl transferase family 2 HQJ03_028625 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family HQJ03_028630 PF00132 Bacterial transferase hexapeptide (six repeats) HQJ03_028665 PF07282 Putative transposase DNA-binding domain HQJ03_028665 PF01385 Probable transposase HQJ03_028665 PF12323 Helix-turn-helix domain HQJ03_028670 PF00356 Bacterial regulatory proteins, lacI family HQJ03_028675 PF07690 Major Facilitator Superfamily HQJ03_028680 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HQJ03_028680 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HQJ03_028685 PF00294 pfkB family carbohydrate kinase HQJ03_028690 PF00171 Aldehyde dehydrogenase family HQJ03_028695 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HQJ03_028695 PF00205 Thiamine pyrophosphate enzyme, central domain HQJ03_028695 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HQJ03_028700 PF01261 Xylose isomerase-like TIM barrel HQJ03_028705 PF01116 Fructose-bisphosphate aldolase class-II HQJ03_028710 PF04962 KduI/IolB family HQJ03_028720 PF01098 Cell cycle protein HQJ03_028730 PF18801 response regulator aspartate phosphatase H, N terminal HQJ03_028755 PF18801 response regulator aspartate phosphatase H, N terminal HQJ03_028755 PF17874 MalT-like TPR region HQJ03_028790 PF11954 Domain of unknown function (DUF3471) HQJ03_028790 PF00144 Beta-lactamase HQJ03_028810 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HQJ03_028810 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HQJ03_028810 PF00205 Thiamine pyrophosphate enzyme, central domain HQJ03_028815 PF13193 AMP-binding enzyme C-terminal domain HQJ03_028815 PF00501 AMP-binding enzyme HQJ03_028825 PF02801 Beta-ketoacyl synthase, C-terminal domain HQJ03_028825 PF00109 Beta-ketoacyl synthase, N-terminal domain HQJ03_028830 PF00664 ABC transporter transmembrane region HQJ03_028830 PF00005 ABC transporter HQJ03_028835 PF00550 Phosphopantetheine attachment site HQJ03_028835 PF00668 Condensation domain HQJ03_028835 PF13193 AMP-binding enzyme C-terminal domain HQJ03_028835 PF00501 AMP-binding enzyme HQJ03_028840 PF00501 AMP-binding enzyme HQJ03_028840 PF00668 Condensation domain HQJ03_028840 PF00550 Phosphopantetheine attachment site HQJ03_028840 PF13193 AMP-binding enzyme C-terminal domain HQJ03_028845 PF00005 ABC transporter HQJ03_028845 PF16326 ABC transporter C-terminal domain HQJ03_028845 PF12848 ABC transporter HQJ03_028850 PF00975 Thioesterase domain HQJ03_028855 PF01648 4'-phosphopantetheinyl transferase superfamily HQJ03_028865 PF01022 Bacterial regulatory protein, arsR family HQJ03_028985 PF01555 DNA methylase HQJ03_029055 PF01381 Helix-turn-helix HQJ03_029125 PF13614 AAA domain HQJ03_029140 PF17854 FtsK alpha domain HQJ03_029140 PF09397 Ftsk gamma domain HQJ03_029140 PF01580 FtsK/SpoIIIE family HQJ03_029165 PF05105 Bacteriophage holin family HQJ03_029190 PF00589 Phage integrase family HQJ03_029195 PF01381 Helix-turn-helix HQJ03_029200 PF13152 Protein of unknown function (DUF3967) HQJ03_029200 PF13411 MerR HTH family regulatory protein HQJ03_029210 PF12802 MarR family HQJ03_029215 PF02600 Disulfide bond formation protein DsbB HQJ03_029220 PF00535 Glycosyl transferase family 2 HQJ03_029225 PF00085 Thioredoxin HQJ03_029230 PF00005 ABC transporter HQJ03_029230 PF00664 ABC transporter transmembrane region HQJ03_029230 PF03412 Peptidase C39 family