locus-tag class description BCJMU02_0001 PF00308 Bacterial dnaA protein BCJMU02_0001 PF08299 Bacterial dnaA protein helix-turn-helix BCJMU02_0001 PF11638 DnaA N-terminal domain BCJMU02_0002 PF00712 DNA polymerase III beta subunit, N-terminal domain BCJMU02_0002 PF02767 DNA polymerase III beta subunit, central domain BCJMU02_0002 PF02768 DNA polymerase III beta subunit, C-terminal domain BCJMU02_0004 PF02463 RecF/RecN/SMC N terminal domain BCJMU02_0005 PF00204 DNA gyrase B BCJMU02_0005 PF00986 DNA gyrase B subunit, carboxyl terminus BCJMU02_0005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCJMU02_0005 PF01751 Toprim domain BCJMU02_0006 PF03989 DNA gyrase C-terminal domain, beta-propeller BCJMU02_0006 PF00521 DNA gyrase/topoisomerase IV, subunit A BCJMU02_0007 PF14175 YaaC-like Protein BCJMU02_0008 PF00571 CBS domain BCJMU02_0008 PF00478 IMP dehydrogenase / GMP reductase domain BCJMU02_0009 PF00768 D-alanyl-D-alanine carboxypeptidase BCJMU02_0009 PF07943 Penicillin-binding protein 5, C-terminal domain BCJMU02_0010 PF01680 SOR/SNZ family BCJMU02_0011 PF01174 SNO glutamine amidotransferase family BCJMU02_0012 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BCJMU02_0012 PF02403 Seryl-tRNA synthetase N-terminal domain BCJMU02_0014 PF01712 Deoxynucleoside kinase BCJMU02_0015 PF01712 Deoxynucleoside kinase BCJMU02_0016 PF00857 Isochorismatase family BCJMU02_0017 PF14437 MafB19-like deaminase BCJMU02_0018 PF12169 DNA polymerase III subunits gamma and tau domain III BCJMU02_0019 PF02575 YbaB/EbfC DNA-binding family BCJMU02_0020 PF02132 RecR protein BCJMU02_0020 PF13662 Toprim domain BCJMU02_0021 PF10704 Protein of unknown function (DUF2508) BCJMU02_0022 PF07441 SigmaK-factor processing regulatory protein BofA BCJMU02_0024 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain BCJMU02_0024 PF01276 Orn/Lys/Arg decarboxylase, major domain BCJMU02_0025 PF02223 Thymidylate kinase BCJMU02_0026 PF09115 DNA polymerase III, delta subunit, C terminal BCJMU02_0027 PF04468 PSP1 C-terminal conserved region BCJMU02_0028 PF06156 Initiation control protein YabA BCJMU02_0029 PF05175 Methyltransferase small domain BCJMU02_0030 PF01541 GIY-YIG catalytic domain BCJMU02_0031 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BCJMU02_0032 PF18277 AbrB C-terminal domain BCJMU02_0032 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin BCJMU02_0033 PF01588 Putative tRNA binding domain BCJMU02_0033 PF08264 Anticodon-binding domain of tRNA BCJMU02_0033 PF09334 tRNA synthetases class I (M) BCJMU02_0034 PF01026 TatD related DNase BCJMU02_0035 PF13331 Domain of unknown function (DUF4093) BCJMU02_0035 PF13662 Toprim domain BCJMU02_0036 PF00398 Ribosomal RNA adenine dimethylase BCJMU02_0037 PF05582 YabG peptidase U57 BCJMU02_0038 PF06257 Biofilm formation stimulator VEG BCJMU02_0039 PF00269 Small, acid-soluble spore proteins, alpha/beta type BCJMU02_0040 PF08544 GHMP kinases C terminal BCJMU02_0040 PF00288 GHMP kinases N terminal domain BCJMU02_0041 PF00156 Phosphoribosyl transferase domain BCJMU02_0041 PF09182 Bacterial purine repressor, N-terminal BCJMU02_0042 PF01042 Endoribonuclease L-PSP BCJMU02_0043 PF04026 SpoVG BCJMU02_0044 PF00483 Nucleotidyl transferase BCJMU02_0044 PF00132 Bacterial transferase hexapeptide (six repeats) BCJMU02_0045 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase BCJMU02_0045 PF14572 Phosphoribosyl synthetase-associated domain BCJMU02_0046 PF01195 Peptidyl-tRNA hydrolase BCJMU02_0048 PF17757 UvrB interaction domain BCJMU02_0048 PF03461 TRCF domain BCJMU02_0048 PF00271 Helicase conserved C-terminal domain BCJMU02_0048 PF00270 DEAD/DEAH box helicase BCJMU02_0048 PF02559 CarD-like/TRCF domain BCJMU02_0049 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin BCJMU02_0049 PF15714 Stage V sporulation protein T C-terminal, transcription factor BCJMU02_0050 PF01943 Polysaccharide biosynthesis protein BCJMU02_0050 PF14667 Polysaccharide biosynthesis C-terminal domain BCJMU02_0051 PF03819 MazG nucleotide pyrophosphohydrolase domain BCJMU02_0051 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BCJMU02_0052 PF01479 S4 domain BCJMU02_0053 PF07873 YabP family BCJMU02_0054 PF09578 Spore cortex protein YabQ (Spore_YabQ) BCJMU02_0056 PF00575 S1 RNA binding domain BCJMU02_0057 PF07228 Stage II sporulation protein E (SpoIIE) BCJMU02_0058 PF01171 PP-loop family BCJMU02_0058 PF09179 TilS substrate binding domain BCJMU02_0058 PF11734 TilS substrate C-terminal domain BCJMU02_0059 PF00156 Phosphoribosyl transferase domain BCJMU02_0060 PF00004 ATPase family associated with various cellular activities (AAA) BCJMU02_0060 PF17862 AAA+ lid domain BCJMU02_0060 PF01434 Peptidase family M41 BCJMU02_0060 PF06480 FtsH Extracellular BCJMU02_0061 PF03309 Type III pantothenate kinase BCJMU02_0062 PF01430 Hsp33 protein BCJMU02_0063 PF00291 Pyridoxal-phosphate dependent enzyme BCJMU02_0064 PF00425 chorismate binding enzyme BCJMU02_0064 PF04715 Anthranilate synthase component I, N terminal region BCJMU02_0065 PF00117 Glutamine amidotransferase class-I BCJMU02_0066 PF01063 Amino-transferase class IV BCJMU02_0067 PF00809 Pterin binding enzyme BCJMU02_0068 PF02152 Dihydroneopterin aldolase BCJMU02_0069 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) BCJMU02_0070 PF01381 Helix-turn-helix BCJMU02_0071 PF01207 Dihydrouridine synthase (Dus) BCJMU02_0072 PF00152 tRNA synthetases class II (D, K and N) BCJMU02_0072 PF01336 OB-fold nucleic acid binding domain BCJMU02_0073 PF17727 CtsR C-terminal dimerization domain BCJMU02_0073 PF05848 CtsR N-terminal HTH domain BCJMU02_0074 PF02151 UvrB/uvrC motif BCJMU02_0075 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain BCJMU02_0076 PF00004 ATPase family associated with various cellular activities (AAA) BCJMU02_0076 PF07724 AAA domain (Cdc48 subfamily) BCJMU02_0076 PF17871 AAA lid domain BCJMU02_0076 PF02861 Clp amino terminal domain, pathogenicity island component BCJMU02_0076 PF10431 C-terminal, D2-small domain, of ClpB protein BCJMU02_0077 PF18073 Rubredoxin metal binding domain BCJMU02_0078 PF10635 DisA bacterial checkpoint controller linker region BCJMU02_0078 PF02457 DisA bacterial checkpoint controller nucleotide-binding BCJMU02_0080 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase BCJMU02_0081 PF02542 YgbB family BCJMU02_0082 PF00749 tRNA synthetases class I (E and Q), catalytic domain BCJMU02_0083 PF00132 Bacterial transferase hexapeptide (six repeats) BCJMU02_0083 PF06426 Serine acetyltransferase, N-terminal BCJMU02_0084 PF09190 DALR domain BCJMU02_0084 PF01406 tRNA synthetases class I (C) catalytic domain BCJMU02_0085 PF00636 Ribonuclease III domain BCJMU02_0086 PF00588 SpoU rRNA Methylase family BCJMU02_0086 PF08032 RNA 2'-O ribose methyltransferase substrate binding BCJMU02_0087 PF05991 YacP-like NYN domain BCJMU02_0088 PF04542 Sigma-70 region 2 BCJMU02_0088 PF08281 Sigma-70, region 4 BCJMU02_0089 PF00584 SecE/Sec61-gamma subunits of protein translocation complex BCJMU02_0090 PF02357 Transcription termination factor nusG BCJMU02_0090 PF00467 KOW motif BCJMU02_0091 PF00298 Ribosomal protein L11, RNA binding domain BCJMU02_0091 PF03946 Ribosomal protein L11, N-terminal domain BCJMU02_0092 PF00687 Ribosomal protein L1p/L10e family BCJMU02_0093 PF00466 Ribosomal protein L10 BCJMU02_0094 PF16320 Ribosomal protein L7/L12 dimerisation domain BCJMU02_0094 PF00542 Ribosomal protein L7/L12 C-terminal domain BCJMU02_0095 PF05175 Methyltransferase small domain BCJMU02_0096 PF04560 RNA polymerase Rpb2, domain 7 BCJMU02_0096 PF00562 RNA polymerase Rpb2, domain 6 BCJMU02_0096 PF10385 RNA polymerase beta subunit external 1 domain BCJMU02_0096 PF04565 RNA polymerase Rpb2, domain 3 BCJMU02_0096 PF04561 RNA polymerase Rpb2, domain 2 BCJMU02_0096 PF04563 RNA polymerase beta subunit BCJMU02_0097 PF04998 RNA polymerase Rpb1, domain 5 BCJMU02_0097 PF05000 RNA polymerase Rpb1, domain 4 BCJMU02_0097 PF04983 RNA polymerase Rpb1, domain 3 BCJMU02_0097 PF00623 RNA polymerase Rpb1, domain 2 BCJMU02_0097 PF04997 RNA polymerase Rpb1, domain 1 BCJMU02_0098 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family BCJMU02_0099 PF00164 Ribosomal protein S12/S23 BCJMU02_0100 PF00177 Ribosomal protein S7p/S5e BCJMU02_0101 PF03144 Elongation factor Tu domain 2 BCJMU02_0101 PF00009 Elongation factor Tu GTP binding domain BCJMU02_0101 PF03764 Elongation factor G, domain IV BCJMU02_0101 PF14492 Elongation Factor G, domain II BCJMU02_0101 PF00679 Elongation factor G C-terminus BCJMU02_0102 PF03143 Elongation factor Tu C-terminal domain BCJMU02_0102 PF00009 Elongation factor Tu GTP binding domain BCJMU02_0102 PF03144 Elongation factor Tu domain 2 BCJMU02_0103 PF00338 Ribosomal protein S10p/S20e BCJMU02_0104 PF00297 Ribosomal protein L3 BCJMU02_0105 PF00573 Ribosomal protein L4/L1 family BCJMU02_0106 PF00276 Ribosomal protein L23 BCJMU02_0107 PF00181 Ribosomal Proteins L2, RNA binding domain BCJMU02_0107 PF03947 Ribosomal Proteins L2, C-terminal domain BCJMU02_0108 PF00203 Ribosomal protein S19 BCJMU02_0109 PF00237 Ribosomal protein L22p/L17e BCJMU02_0110 PF07650 KH domain BCJMU02_0110 PF00189 Ribosomal protein S3, C-terminal domain BCJMU02_0111 PF00252 Ribosomal protein L16p/L10e BCJMU02_0112 PF00831 Ribosomal L29 protein BCJMU02_0113 PF00366 Ribosomal protein S17 BCJMU02_0114 PF00238 Ribosomal protein L14p/L23e BCJMU02_0115 PF00467 KOW motif BCJMU02_0115 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 BCJMU02_0116 PF00281 Ribosomal protein L5 BCJMU02_0116 PF00673 ribosomal L5P family C-terminus BCJMU02_0117 PF00253 Ribosomal protein S14p/S29e BCJMU02_0118 PF00410 Ribosomal protein S8 BCJMU02_0119 PF00347 Ribosomal protein L6 BCJMU02_0120 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast BCJMU02_0121 PF00333 Ribosomal protein S5, N-terminal domain BCJMU02_0121 PF03719 Ribosomal protein S5, C-terminal domain BCJMU02_0122 PF00327 Ribosomal protein L30p/L7e BCJMU02_0123 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A BCJMU02_0124 PF00344 SecY translocase BCJMU02_0125 PF05191 Adenylate kinase, active site lid BCJMU02_0126 PF00557 Metallopeptidase family M24 BCJMU02_0127 PF01176 Translation initiation factor 1A / IF-1 BCJMU02_0128 PF00416 Ribosomal protein S13/S18 BCJMU02_0129 PF00411 Ribosomal protein S11 BCJMU02_0130 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain BCJMU02_0130 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain BCJMU02_0130 PF01000 RNA polymerase Rpb3/RpoA insert domain BCJMU02_0131 PF01196 Ribosomal protein L17 BCJMU02_0132 PF00005 ABC transporter BCJMU02_0133 PF00005 ABC transporter BCJMU02_0134 PF02361 Cobalt transport protein BCJMU02_0135 PF01416 tRNA pseudouridine synthase BCJMU02_0136 PF00572 Ribosomal protein L13 BCJMU02_0137 PF00380 Ribosomal protein S9/S16 BCJMU02_0139 PF01520 N-acetylmuramoyl-L-alanine amidase BCJMU02_0140 PF10609 NUBPL iron-transfer P-loop NTPase BCJMU02_0141 PF17898 Spore germination GerD central core domain BCJMU02_0142 PF14089 KinB-signalling pathway activation in sporulation BCJMU02_0143 PF01522 Polysaccharide deacetylase BCJMU02_0145 PF02595 Glycerate kinase family BCJMU02_0146 PF00491 Arginase family BCJMU02_0147 PF02457 DisA bacterial checkpoint controller nucleotide-binding BCJMU02_0148 PF07949 YbbR-like protein BCJMU02_0149 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BCJMU02_0149 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BCJMU02_0149 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BCJMU02_0149 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BCJMU02_0151 PF01380 SIS domain BCJMU02_0154 PF00392 Bacterial regulatory proteins, gntR family BCJMU02_0154 PF07729 FCD domain BCJMU02_0155 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BCJMU02_0155 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BCJMU02_0156 PF02447 GntP family permease BCJMU02_0157 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BCJMU02_0157 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain BCJMU02_0158 PF00326 Prolyl oligopeptidase family BCJMU02_0158 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region BCJMU02_0164 PF13333 Integrase core domain BCJMU02_0164 PF00665 Integrase core domain BCJMU02_0164 PF13276 HTH-like domain BCJMU02_0165 PF13333 Integrase core domain BCJMU02_0165 PF00665 Integrase core domain BCJMU02_0165 PF13276 HTH-like domain BCJMU02_0168 PF00528 Binding-protein-dependent transport system inner membrane component BCJMU02_0169 PF09383 NIL domain BCJMU02_0169 PF00005 ABC transporter BCJMU02_0170 PF03180 NLPA lipoprotein BCJMU02_0171 PF08240 Alcohol dehydrogenase GroES-like domain BCJMU02_0171 PF00107 Zinc-binding dehydrogenase BCJMU02_0173 PF01565 FAD binding domain BCJMU02_0174 PF07690 Major Facilitator Superfamily BCJMU02_0176 PF07690 Major Facilitator Superfamily BCJMU02_0179 PF00528 Binding-protein-dependent transport system inner membrane component BCJMU02_0180 PF00528 Binding-protein-dependent transport system inner membrane component BCJMU02_0180 PF12911 N-terminal TM domain of oligopeptide transport permease C BCJMU02_0181 PF00005 ABC transporter BCJMU02_0181 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BCJMU02_0182 PF00005 ABC transporter BCJMU02_0182 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BCJMU02_0183 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BCJMU02_0185 PF12833 Helix-turn-helix domain BCJMU02_0187 PF00440 Bacterial regulatory proteins, tetR family BCJMU02_0189 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BCJMU02_0190 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BCJMU02_0191 PF00248 Aldo/keto reductase family BCJMU02_0192 PF03807 NADP oxidoreductase coenzyme F420-dependent BCJMU02_0192 PF14748 Pyrroline-5-carboxylate reductase dimerisation BCJMU02_0193 PF04973 Nicotinamide mononucleotide transporter BCJMU02_0194 PF06800 Sugar transport protein BCJMU02_0195 PF00528 Binding-protein-dependent transport system inner membrane component BCJMU02_0197 PF12728 Helix-turn-helix domain BCJMU02_0197 PF12727 PBP superfamily domain BCJMU02_0198 PF03466 LysR substrate binding domain BCJMU02_0198 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BCJMU02_0199 PF00892 EamA-like transporter family BCJMU02_0200 PF14142 YrzO-like protein BCJMU02_0201 PF01553 Acyltransferase BCJMU02_0202 PF00356 Bacterial regulatory proteins, lacI family BCJMU02_0202 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BCJMU02_0204 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BCJMU02_0204 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BCJMU02_0206 PF01026 TatD related DNase BCJMU02_0208 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) BCJMU02_0213 PF12848 ABC transporter BCJMU02_0213 PF00005 ABC transporter BCJMU02_0213 PF16326 ABC transporter C-terminal domain BCJMU02_0215 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BCJMU02_0216 PF00528 Binding-protein-dependent transport system inner membrane component BCJMU02_0217 PF00528 Binding-protein-dependent transport system inner membrane component BCJMU02_0217 PF12911 N-terminal TM domain of oligopeptide transport permease C BCJMU02_0218 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BCJMU02_0218 PF00005 ABC transporter BCJMU02_0219 PF00005 ABC transporter BCJMU02_0219 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BCJMU02_0223 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BCJMU02_0224 PF01557 Fumarylacetoacetate (FAA) hydrolase family BCJMU02_0226 PF07690 Major Facilitator Superfamily BCJMU02_0227 PF01820 D-ala D-ala ligase N-terminus BCJMU02_0227 PF07478 D-ala D-ala ligase C-terminus BCJMU02_0228 PF01225 Mur ligase family, catalytic domain BCJMU02_0228 PF02875 Mur ligase family, glutamate ligase domain BCJMU02_0228 PF08245 Mur ligase middle domain BCJMU02_0229 PF00270 DEAD/DEAH box helicase BCJMU02_0229 PF00271 Helicase conserved C-terminal domain BCJMU02_0230 PF03851 UV-endonuclease UvdE BCJMU02_0231 PF01694 Rhomboid family BCJMU02_0232 PF01648 4'-phosphopantetheinyl transferase superfamily BCJMU02_0234 PF00842 Alanine racemase, C-terminal domain BCJMU02_0234 PF01168 Alanine racemase, N-terminal domain BCJMU02_0235 PF01402 Ribbon-helix-helix protein, copG family BCJMU02_0236 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system BCJMU02_0237 PF16921 Tex protein YqgF-like domain BCJMU02_0237 PF17674 HHH domain BCJMU02_0237 PF00575 S1 RNA binding domain BCJMU02_0237 PF09371 Tex-like protein N-terminal domain BCJMU02_0238 PF17283 SprT-like zinc ribbon domain BCJMU02_0238 PF10263 SprT-like family BCJMU02_0239 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE BCJMU02_0240 PF00814 Glycoprotease family BCJMU02_0241 PF00583 Acetyltransferase (GNAT) family BCJMU02_0242 PF00814 Glycoprotease family BCJMU02_0243 PF00005 ABC transporter BCJMU02_0243 PF16326 ABC transporter C-terminal domain BCJMU02_0243 PF12848 ABC transporter BCJMU02_0244 PF02629 CoA binding domain BCJMU02_0244 PF06971 Putative DNA-binding protein N-terminus BCJMU02_0246 PF02517 CPBP intramembrane metalloprotease BCJMU02_0247 PF00166 Chaperonin 10 Kd subunit BCJMU02_0248 PF00118 TCP-1/cpn60 chaperonin family BCJMU02_0249 PF14449 Pre-toxin TG BCJMU02_0249 PF04740 LXG domain of WXG superfamily BCJMU02_0251 PF00117 Glutamine amidotransferase class-I BCJMU02_0251 PF02540 NAD synthase BCJMU02_0251 PF00958 GMP synthase C terminal domain BCJMU02_0252 PF00860 Permease family BCJMU02_0253 PF00072 Response regulator receiver domain BCJMU02_0253 PF00486 Transcriptional regulatory protein, C terminal BCJMU02_0254 PF16736 Single Cache-like BCJMU02_0254 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCJMU02_0254 PF00512 His Kinase A (phospho-acceptor) domain BCJMU02_0254 PF00989 PAS fold BCJMU02_0257 PF02673 Bacitracin resistance protein BacA BCJMU02_0259 PF00005 ABC transporter BCJMU02_0260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCJMU02_0260 PF00512 His Kinase A (phospho-acceptor) domain BCJMU02_0261 PF00072 Response regulator receiver domain BCJMU02_0261 PF00486 Transcriptional regulatory protein, C terminal BCJMU02_0262 PF00892 EamA-like transporter family BCJMU02_0264 PF00731 AIR carboxylase BCJMU02_0265 PF02222 ATP-grasp domain BCJMU02_0265 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain BCJMU02_0266 PF10397 Adenylosuccinate lyase C-terminus BCJMU02_0266 PF00206 Lyase BCJMU02_0267 PF01259 SAICAR synthetase BCJMU02_0268 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase BCJMU02_0270 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain BCJMU02_0270 PF00586 AIR synthase related protein, N-terminal domain BCJMU02_0270 PF02769 AIR synthase related protein, C-terminal domain BCJMU02_0271 PF00156 Phosphoribosyl transferase domain BCJMU02_0272 PF00586 AIR synthase related protein, N-terminal domain BCJMU02_0272 PF02769 AIR synthase related protein, C-terminal domain BCJMU02_0273 PF00551 Formyl transferase BCJMU02_0274 PF01808 AICARFT/IMPCHase bienzyme BCJMU02_0274 PF02142 MGS-like domain BCJMU02_0275 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain BCJMU02_0275 PF02843 Phosphoribosylglycinamide synthetase, C domain BCJMU02_0275 PF02844 Phosphoribosylglycinamide synthetase, N domain BCJMU02_0279 PF01884 PcrB family BCJMU02_0280 PF13361 UvrD-like helicase C-terminal domain BCJMU02_0280 PF00580 UvrD/REP helicase N-terminal domain BCJMU02_0281 PF00533 BRCA1 C Terminus (BRCT) domain BCJMU02_0281 PF01653 NAD-dependent DNA ligase adenylation domain BCJMU02_0281 PF03120 NAD-dependent DNA ligase OB-fold domain BCJMU02_0281 PF03119 NAD-dependent DNA ligase C4 zinc finger domain BCJMU02_0281 PF12826 Helix-hairpin-helix motif BCJMU02_0282 PF07537 CamS sex pheromone cAM373 precursor BCJMU02_0283 PF01925 Sulfite exporter TauE/SafE BCJMU02_0284 PF00171 Aldehyde dehydrogenase family BCJMU02_0286 PF00857 Isochorismatase family BCJMU02_0287 PF09383 NIL domain BCJMU02_0287 PF00005 ABC transporter BCJMU02_0288 PF00528 Binding-protein-dependent transport system inner membrane component BCJMU02_0289 PF03180 NLPA lipoprotein BCJMU02_0291 PF02374 Anion-transporting ATPase BCJMU02_0291 PF17886 HSP20-like domain found in ArsA BCJMU02_0292 PF01047 MarR family BCJMU02_0293 PF05360 yiaA/B two helix domain BCJMU02_0294 PF02686 Glu-tRNAGln amidotransferase C subunit BCJMU02_0295 PF01425 Amidase BCJMU02_0296 PF02934 GatB/GatE catalytic domain BCJMU02_0296 PF02637 GatB domain BCJMU02_0297 PF00781 Diacylglycerol kinase catalytic domain BCJMU02_0298 PF13419 Haloacid dehalogenase-like hydrolase BCJMU02_0299 PF00202 Aminotransferase class-III BCJMU02_0300 PF00158 Sigma-54 interaction domain BCJMU02_0301 PF00171 Aldehyde dehydrogenase family BCJMU02_0302 PF00893 Small Multidrug Resistance protein BCJMU02_0303 PF02073 Thermophilic metalloprotease (M29) BCJMU02_0306 PF07670 Nucleoside recognition BCJMU02_0306 PF07662 Na+ dependent nucleoside transporter C-terminus BCJMU02_0306 PF01773 Na+ dependent nucleoside transporter N-terminus BCJMU02_0307 PF05958 tRNA (Uracil-5-)-methyltransferase BCJMU02_0307 PF01938 TRAM domain BCJMU02_0307 PF02475 Met-10+ like-protein BCJMU02_0308 PF01207 Dihydrouridine synthase (Dus) BCJMU02_0310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCJMU02_0310 PF13426 PAS domain BCJMU02_0310 PF00989 PAS fold BCJMU02_0310 PF00512 His Kinase A (phospho-acceptor) domain BCJMU02_0310 PF13188 PAS domain BCJMU02_0311 PF07308 Protein of unknown function (DUF1456) BCJMU02_0314 PF13378 Enolase C-terminal domain-like BCJMU02_0314 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BCJMU02_0316 PF03553 Na+/H+ antiporter family BCJMU02_0317 PF07687 Peptidase dimerisation domain BCJMU02_0317 PF01546 Peptidase family M20/M25/M40 BCJMU02_0319 PF07992 Pyridine nucleotide-disulphide oxidoreductase BCJMU02_0319 PF13192 Thioredoxin domain BCJMU02_0320 PF00578 AhpC/TSA family BCJMU02_0321 PF01636 Phosphotransferase enzyme family BCJMU02_0322 PF01008 Initiation factor 2 subunit family BCJMU02_0323 PF00596 Class II Aldolase and Adducin N-terminal domain BCJMU02_0324 PF01032 FecCD transport family BCJMU02_0325 PF01032 FecCD transport family BCJMU02_0326 PF01497 Periplasmic binding protein BCJMU02_0328 PF07992 Pyridine nucleotide-disulphide oxidoreductase BCJMU02_0330 PF12728 Helix-turn-helix domain BCJMU02_0335 PF00989 PAS fold BCJMU02_0335 PF13188 PAS domain BCJMU02_0335 PF13426 PAS domain BCJMU02_0335 PF00512 His Kinase A (phospho-acceptor) domain BCJMU02_0335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCJMU02_0339 PF10127 RNA repair pathway DNA polymerase beta family BCJMU02_0340 PF07690 Major Facilitator Superfamily BCJMU02_0341 PF01266 FAD dependent oxidoreductase BCJMU02_0341 PF00355 Rieske [2Fe-2S] domain BCJMU02_0343 PF00528 Binding-protein-dependent transport system inner membrane component BCJMU02_0344 PF00497 Bacterial extracellular solute-binding proteins, family 3 BCJMU02_0345 PF00005 ABC transporter BCJMU02_0346 PF12729 Four helix bundle sensory module for signal transduction BCJMU02_0346 PF00672 HAMP domain BCJMU02_0346 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BCJMU02_0347 PF00672 HAMP domain BCJMU02_0347 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BCJMU02_0347 PF17202 Single cache domain 3 BCJMU02_0348 PF00128 Alpha amylase, catalytic domain BCJMU02_0348 PF16657 Maltogenic Amylase, C-terminal domain BCJMU02_0349 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BCJMU02_0349 PF00367 phosphotransferase system, EIIB BCJMU02_0349 PF02378 Phosphotransferase system, EIIC BCJMU02_0350 PF03372 Endonuclease/Exonuclease/phosphatase family BCJMU02_0351 PF01061 ABC-2 type transporter BCJMU02_0352 PF01131 DNA topoisomerase BCJMU02_0352 PF01751 Toprim domain BCJMU02_0359 PF02151 UvrB/uvrC motif BCJMU02_0359 PF12344 Ultra-violet resistance protein B BCJMU02_0359 PF17757 UvrB interaction domain BCJMU02_0359 PF04851 Type III restriction enzyme, res subunit BCJMU02_0359 PF00271 Helicase conserved C-terminal domain BCJMU02_0360 PF01381 Helix-turn-helix BCJMU02_0362 PF01751 Toprim domain BCJMU02_0362 PF01131 DNA topoisomerase BCJMU02_0367 PF01131 DNA topoisomerase BCJMU02_0367 PF01751 Toprim domain BCJMU02_0368 PF02110 Hydroxyethylthiazole kinase family BCJMU02_0369 PF02581 Thiamine monophosphate synthase BCJMU02_0370 PF03605 Anaerobic c4-dicarboxylate membrane transporter BCJMU02_0371 PF00672 HAMP domain BCJMU02_0371 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BCJMU02_0372 PF01910 Thiamine-binding protein BCJMU02_0373 PF00528 Binding-protein-dependent transport system inner membrane component BCJMU02_0375 PF00005 ABC transporter BCJMU02_0377 PF12848 ABC transporter BCJMU02_0377 PF00005 ABC transporter BCJMU02_0378 PF00041 Fibronectin type III domain BCJMU02_0378 PF00704 Glycosyl hydrolases family 18 BCJMU02_0383 PF00440 Bacterial regulatory proteins, tetR family BCJMU02_0383 PF08360 QacR-like protein, C-terminal region BCJMU02_0387 PF11700 Vacuole effluxer Atg22 like BCJMU02_0390 PF03129 Anticodon binding domain BCJMU02_0390 PF09180 Prolyl-tRNA synthetase, C-terminal BCJMU02_0390 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BCJMU02_0392 PF00480 ROK family BCJMU02_0393 PF02342 TerD domain BCJMU02_0394 PF02342 TerD domain BCJMU02_0395 PF02342 TerD domain BCJMU02_0396 PF03741 Integral membrane protein TerC family BCJMU02_0397 PF14266 Putative component of 'biosynthetic module' BCJMU02_0398 PF05816 Toxic anion resistance protein (TelA) BCJMU02_0399 PF00689 Cation transporting ATPase, C-terminus BCJMU02_0399 PF00690 Cation transporter/ATPase, N-terminus BCJMU02_0400 PF06569 Protein of unknown function (DUF1128) BCJMU02_0401 PF01451 Low molecular weight phosphotyrosine protein phosphatase BCJMU02_0403 PF03631 Virulence factor BrkB BCJMU02_0406 PF00892 EamA-like transporter family BCJMU02_0408 PF10502 Signal peptidase, peptidase S26 BCJMU02_0410 PF09335 SNARE associated Golgi protein BCJMU02_0413 PF16242 Pyridoxamine 5'-phosphate oxidase like BCJMU02_0414 PF01699 Sodium/calcium exchanger protein BCJMU02_0415 PF14167 YfkD-like protein BCJMU02_0416 PF04055 Radical SAM superfamily BCJMU02_0416 PF08756 YfkB-like domain BCJMU02_0418 PF05681 Fumarate hydratase (Fumerase) BCJMU02_0418 PF05683 Fumarase C-terminus BCJMU02_0419 PF01522 Polysaccharide deacetylase BCJMU02_0420 PF00730 HhH-GPD superfamily base excision DNA repair protein BCJMU02_0421 PF01938 TRAM domain BCJMU02_0421 PF05958 tRNA (Uracil-5-)-methyltransferase BCJMU02_0422 PF01416 tRNA pseudouridine synthase BCJMU02_0423 PF02954 Bacterial regulatory protein, Fis family BCJMU02_0423 PF13426 PAS domain BCJMU02_0423 PF00158 Sigma-54 interaction domain BCJMU02_0425 PF00324 Amino acid permease BCJMU02_0426 PF07687 Peptidase dimerisation domain BCJMU02_0426 PF01546 Peptidase family M20/M25/M40 BCJMU02_0431 PF04960 Glutaminase BCJMU02_0432 PF00367 phosphotransferase system, EIIB BCJMU02_0432 PF02378 Phosphotransferase system, EIIC BCJMU02_0433 PF00144 Beta-lactamase BCJMU02_0436 PF00535 Glycosyl transferase family 2 BCJMU02_0437 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BCJMU02_0437 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BCJMU02_0437 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BCJMU02_0438 PF00551 Formyl transferase BCJMU02_0438 PF02911 Formyl transferase, C-terminal domain BCJMU02_0438 PF01370 NAD dependent epimerase/dehydratase family BCJMU02_0439 PF00535 Glycosyl transferase family 2 BCJMU02_0440 PF01228 Glycine radical BCJMU02_0440 PF02901 Pyruvate formate lyase-like BCJMU02_0441 PF04055 Radical SAM superfamily BCJMU02_0443 PF04101 Glycosyltransferase family 28 C-terminal domain BCJMU02_0443 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase BCJMU02_0446 PF01979 Amidohydrolase family BCJMU02_0447 PF01370 NAD dependent epimerase/dehydratase family BCJMU02_0447 PF08338 Domain of unknown function (DUF1731) BCJMU02_0448 PF02631 RecX family BCJMU02_0451 PF08176 Small acid-soluble spore protein K family BCJMU02_0452 PF14043 WVELL protein BCJMU02_0453 PF04307 LexA-binding, inner membrane-associated putative hydrolase BCJMU02_0454 PF00730 HhH-GPD superfamily base excision DNA repair protein BCJMU02_0454 PF14815 NUDIX domain BCJMU02_0456 PF04259 Small, acid-soluble spore protein, gamma-type BCJMU02_0457 PF14182 YgaB-like protein BCJMU02_0458 PF04167 Protein of unknown function (DUF402) BCJMU02_0459 PF00005 ABC transporter BCJMU02_0459 PF00664 ABC transporter transmembrane region BCJMU02_0460 PF06081 Aromatic acid exporter family member 1 BCJMU02_0461 PF01493 GXGXG motif BCJMU02_0461 PF00310 Glutamine amidotransferases class-II BCJMU02_0461 PF04898 Glutamate synthase central domain BCJMU02_0461 PF01645 Conserved region in glutamate synthase BCJMU02_0462 PF00202 Aminotransferase class-III BCJMU02_0463 PF00005 ABC transporter BCJMU02_0466 PF07885 Ion channel BCJMU02_0467 PF00578 AhpC/TSA family BCJMU02_0468 PF01475 Ferric uptake regulator family BCJMU02_0469 PF11023 Zinc-ribbon containing domain BCJMU02_0471 PF01709 Transcriptional regulator BCJMU02_0472 PF13344 Haloacid dehalogenase-like hydrolase BCJMU02_0472 PF00293 NUDIX domain BCJMU02_0473 PF00905 Penicillin binding protein transpeptidase domain BCJMU02_0473 PF00912 Transglycosylase BCJMU02_0474 PF13462 Thioredoxin BCJMU02_0475 PF08331 Domain of unknown function (DUF1730) BCJMU02_0476 PF12671 Putative amidase domain BCJMU02_0477 PF00588 SpoU rRNA Methylase family BCJMU02_0478 PF00563 EAL domain BCJMU02_0478 PF00498 FHA domain BCJMU02_0478 PF00990 Diguanylate cyclase, GGDEF domain BCJMU02_0479 PF08298 PrkA AAA domain BCJMU02_0479 PF06798 PrkA serine protein kinase C-terminal domain BCJMU02_0480 PF04285 Protein of unknown function (DUF444) BCJMU02_0483 PF13302 Acetyltransferase (GNAT) domain BCJMU02_0484 PF02028 BCCT, betaine/carnitine/choline family transporter BCJMU02_0485 PF18496 Collagenase G catalytic helper subdomain BCJMU02_0485 PF01752 Collagenase BCJMU02_0485 PF08453 Peptidase family M9 N-terminal BCJMU02_0487 PF01145 SPFH domain / Band 7 family BCJMU02_0487 PF15975 Flotillin BCJMU02_0488 PF02743 Cache domain BCJMU02_0488 PF00672 HAMP domain BCJMU02_0488 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BCJMU02_0489 PF00989 PAS fold BCJMU02_0489 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain BCJMU02_0489 PF17203 Single cache domain 3 BCJMU02_0489 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCJMU02_0490 PF00072 Response regulator receiver domain BCJMU02_0490 PF12431 Transcriptional regulator BCJMU02_0491 PF03600 Citrate transporter BCJMU02_0495 PF04309 Glycerol-3-phosphate responsive antiterminator BCJMU02_0496 PF00005 ABC transporter BCJMU02_0496 PF17912 MalK OB fold domain BCJMU02_0497 PF00528 Binding-protein-dependent transport system inner membrane component BCJMU02_0498 PF00528 Binding-protein-dependent transport system inner membrane component BCJMU02_0499 PF13416 Bacterial extracellular solute-binding protein BCJMU02_0500 PF00149 Calcineurin-like phosphoesterase BCJMU02_0501 PF00486 Transcriptional regulatory protein, C terminal BCJMU02_0501 PF00072 Response regulator receiver domain BCJMU02_0502 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCJMU02_0502 PF00512 His Kinase A (phospho-acceptor) domain BCJMU02_0504 PF13529 Peptidase_C39 like family BCJMU02_0505 PF02743 Cache domain BCJMU02_0505 PF00672 HAMP domain BCJMU02_0505 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BCJMU02_0506 PF17203 Single cache domain 3 BCJMU02_0506 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain BCJMU02_0506 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCJMU02_0506 PF00989 PAS fold BCJMU02_0507 PF00072 Response regulator receiver domain BCJMU02_0508 PF03390 2-hydroxycarboxylate transporter family BCJMU02_0509 PF03949 Malic enzyme, NAD binding domain BCJMU02_0509 PF00390 Malic enzyme, N-terminal domain BCJMU02_0511 PF00892 EamA-like transporter family BCJMU02_0512 PF00155 Aminotransferase class I and II BCJMU02_0512 PF00392 Bacterial regulatory proteins, gntR family BCJMU02_0514 PF00672 HAMP domain BCJMU02_0514 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCJMU02_0514 PF18698 Histidine kinase sensor domain BCJMU02_0514 PF00512 His Kinase A (phospho-acceptor) domain BCJMU02_0514 PF00989 PAS fold BCJMU02_0515 PF00072 Response regulator receiver domain BCJMU02_0515 PF00486 Transcriptional regulatory protein, C terminal BCJMU02_0517 PF13508 Acetyltransferase (GNAT) domain BCJMU02_0517 PF00583 Acetyltransferase (GNAT) family BCJMU02_0518 PF02634 FdhD/NarQ family BCJMU02_0519 PF00037 4Fe-4S binding domain BCJMU02_0519 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BCJMU02_0519 PF01568 Molydopterin dinucleotide binding domain BCJMU02_0519 PF00384 Molybdopterin oxidoreductase BCJMU02_0519 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BCJMU02_0520 PF07849 Protein of unknown function (DUF1641) BCJMU02_0522 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BCJMU02_0522 PF05222 Alanine dehydrogenase/PNT, N-terminal domain BCJMU02_0523 PF13520 Amino acid permease BCJMU02_0524 PF01022 Bacterial regulatory protein, arsR family BCJMU02_0525 PF00403 Heavy-metal-associated domain BCJMU02_0526 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain BCJMU02_0526 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain BCJMU02_0526 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family BCJMU02_0529 PF02868 Thermolysin metallopeptidase, alpha-helical domain BCJMU02_0529 PF03413 Peptidase propeptide and YPEB domain BCJMU02_0529 PF01447 Thermolysin metallopeptidase, catalytic domain BCJMU02_0529 PF07504 Fungalysin/Thermolysin Propeptide Motif BCJMU02_0533 PF04294 VanW like protein BCJMU02_0534 PF03816 Cell envelope-related transcriptional attenuator domain BCJMU02_0535 PF07662 Na+ dependent nucleoside transporter C-terminus BCJMU02_0535 PF01773 Na+ dependent nucleoside transporter N-terminus BCJMU02_0536 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BCJMU02_0537 PF00571 CBS domain BCJMU02_0537 PF01595 Cyclin M transmembrane N-terminal domain BCJMU02_0537 PF03471 Transporter associated domain BCJMU02_0538 PF10415 Fumarase C C-terminus BCJMU02_0538 PF00206 Lyase BCJMU02_0539 PF02652 L-lactate permease BCJMU02_0540 PF01022 Bacterial regulatory protein, arsR family BCJMU02_0541 PF08141 Small acid-soluble spore protein H family BCJMU02_0542 PF00854 POT family BCJMU02_0543 PF01497 Periplasmic binding protein BCJMU02_0544 PF01032 FecCD transport family BCJMU02_0545 PF01032 FecCD transport family BCJMU02_0546 PF00005 ABC transporter BCJMU02_0547 PF08241 Methyltransferase domain BCJMU02_0548 PF00155 Aminotransferase class I and II BCJMU02_0549 PF01370 NAD dependent epimerase/dehydratase family BCJMU02_0550 PF00156 Phosphoribosyl transferase domain BCJMU02_0551 PF00293 NUDIX domain BCJMU02_0551 PF13344 Haloacid dehalogenase-like hydrolase BCJMU02_0552 PF00092 von Willebrand factor type A domain BCJMU02_0553 PF07728 AAA domain (dynein-related subfamily) BCJMU02_0554 PF13091 PLD-like domain BCJMU02_0554 PF13396 Phospholipase_D-nuclease N-terminal BCJMU02_0556 PF00990 Diguanylate cyclase, GGDEF domain BCJMU02_0556 PF03707 Bacterial signalling protein N terminal repeat BCJMU02_0556 PF00563 EAL domain BCJMU02_0557 PF13520 Amino acid permease BCJMU02_0558 PF00392 Bacterial regulatory proteins, gntR family BCJMU02_0558 PF07702 UTRA domain BCJMU02_0559 PF00367 phosphotransferase system, EIIB BCJMU02_0559 PF02378 Phosphotransferase system, EIIC BCJMU02_0560 PF16657 Maltogenic Amylase, C-terminal domain BCJMU02_0560 PF00128 Alpha amylase, catalytic domain BCJMU02_0563 PF03323 Bacillus/Clostridium GerA spore germination protein BCJMU02_0564 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCJMU02_0564 PF07730 Histidine kinase BCJMU02_0564 PF13492 GAF domain BCJMU02_0565 PF00196 Bacterial regulatory proteins, luxR family BCJMU02_0565 PF00072 Response regulator receiver domain BCJMU02_0566 PF00082 Subtilase family BCJMU02_0566 PF13860 FlgD Ig-like domain BCJMU02_0566 PF05922 Peptidase inhibitor I9 BCJMU02_0566 PF02225 PA domain BCJMU02_0567 PF12389 Camelysin metallo-endopeptidase BCJMU02_0570 PF01636 Phosphotransferase enzyme family BCJMU02_0571 PF01235 Sodium:alanine symporter family BCJMU02_0572 PF00005 ABC transporter BCJMU02_0573 PF00497 Bacterial extracellular solute-binding proteins, family 3 BCJMU02_0574 PF00528 Binding-protein-dependent transport system inner membrane component BCJMU02_0575 PF00528 Binding-protein-dependent transport system inner membrane component BCJMU02_0576 PF00324 Amino acid permease BCJMU02_0581 PF08279 HTH domain BCJMU02_0581 PF13280 WYL domain BCJMU02_0582 PF01872 RibD C-terminal domain BCJMU02_0583 PF00989 PAS fold BCJMU02_0583 PF18698 Histidine kinase sensor domain BCJMU02_0583 PF00512 His Kinase A (phospho-acceptor) domain BCJMU02_0583 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCJMU02_0583 PF00672 HAMP domain BCJMU02_0584 PF00072 Response regulator receiver domain BCJMU02_0584 PF00486 Transcriptional regulatory protein, C terminal BCJMU02_0586 PF01740 STAS domain BCJMU02_0586 PF00916 Sulfate permease family BCJMU02_0587 PF00582 Universal stress protein family BCJMU02_0589 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BCJMU02_0590 PF00528 Binding-protein-dependent transport system inner membrane component BCJMU02_0591 PF00528 Binding-protein-dependent transport system inner membrane component BCJMU02_0592 PF00005 ABC transporter BCJMU02_0592 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BCJMU02_0593 PF00005 ABC transporter BCJMU02_0593 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BCJMU02_0594 PF07690 Major Facilitator Superfamily BCJMU02_0596 PF01047 MarR family BCJMU02_0597 PF07690 Major Facilitator Superfamily BCJMU02_0598 PF00356 Bacterial regulatory proteins, lacI family BCJMU02_0599 PF00294 pfkB family carbohydrate kinase BCJMU02_0600 PF05025 RbsD / FucU transport protein family BCJMU02_0601 PF00005 ABC transporter BCJMU02_0602 PF02653 Branched-chain amino acid transport system / permease component BCJMU02_0603 PF13407 Periplasmic binding protein domain BCJMU02_0604 PF00923 Transaldolase/Fructose-6-phosphate aldolase BCJMU02_0605 PF05547 Immune inhibitor A peptidase M6 BCJMU02_0607 PF00107 Zinc-binding dehydrogenase BCJMU02_0607 PF08240 Alcohol dehydrogenase GroES-like domain BCJMU02_0609 PF00882 Zinc dependent phospholipase C BCJMU02_0610 PF03372 Endonuclease/Exonuclease/phosphatase family BCJMU02_0611 PF03372 Endonuclease/Exonuclease/phosphatase family BCJMU02_0616 PF02673 Bacitracin resistance protein BacA BCJMU02_0617 PF02743 Cache domain BCJMU02_0617 PF00672 HAMP domain BCJMU02_0617 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BCJMU02_0618 PF01476 LysM domain BCJMU02_0618 PF06725 3D domain BCJMU02_0619 PF01381 Helix-turn-helix BCJMU02_0621 PF04203 Sortase domain BCJMU02_0622 PF00854 POT family BCJMU02_0624 PF05525 Branched-chain amino acid transport protein BCJMU02_0627 PF00324 Amino acid permease BCJMU02_0628 PF00860 Permease family BCJMU02_0631 PF13673 Acetyltransferase (GNAT) domain BCJMU02_0633 PF00999 Sodium/hydrogen exchanger family BCJMU02_0633 PF02080 TrkA-C domain BCJMU02_0633 PF02254 TrkA-N domain BCJMU02_0635 PF00510 Cytochrome c oxidase subunit III BCJMU02_0636 PF00115 Cytochrome C and Quinol oxidase polypeptide I BCJMU02_0637 PF02790 Cytochrome C oxidase subunit II, transmembrane domain BCJMU02_0638 PF13529 Peptidase_C39 like family BCJMU02_0639 PF01546 Peptidase family M20/M25/M40 BCJMU02_0639 PF07687 Peptidase dimerisation domain BCJMU02_0640 PF11755 Protein of unknown function (DUF3311) BCJMU02_0641 PF00474 Sodium:solute symporter family BCJMU02_0642 PF03323 Bacillus/Clostridium GerA spore germination protein BCJMU02_0643 PF03845 Spore germination protein BCJMU02_0644 PF05504 Spore germination B3/ GerAC like, C-terminal BCJMU02_0645 PF07664 Ferrous iron transport protein B C terminus BCJMU02_0645 PF17910 FeoB cytosolic helical domain BCJMU02_0645 PF02421 Ferrous iron transport protein B BCJMU02_0645 PF07670 Nucleoside recognition BCJMU02_0646 PF07670 Nucleoside recognition BCJMU02_0646 PF17910 FeoB cytosolic helical domain BCJMU02_0646 PF02421 Ferrous iron transport protein B BCJMU02_0646 PF07664 Ferrous iron transport protein B C terminus BCJMU02_0647 PF04023 FeoA domain BCJMU02_0647 PF07670 Nucleoside recognition BCJMU02_0647 PF17910 FeoB cytosolic helical domain BCJMU02_0647 PF02421 Ferrous iron transport protein B BCJMU02_0647 PF07664 Ferrous iron transport protein B C terminus BCJMU02_0648 PF12849 PBP superfamily domain BCJMU02_0649 PF00528 Binding-protein-dependent transport system inner membrane component BCJMU02_0650 PF00528 Binding-protein-dependent transport system inner membrane component BCJMU02_0652 PF00873 AcrB/AcrD/AcrF family BCJMU02_0653 PF00571 CBS domain BCJMU02_0656 PF00246 Zinc carboxypeptidase BCJMU02_0656 PF08239 Bacterial SH3 domain BCJMU02_0657 PF03070 TENA/THI-4/PQQC family BCJMU02_0658 PF00005 ABC transporter BCJMU02_0659 PF00528 Binding-protein-dependent transport system inner membrane component BCJMU02_0660 PF09084 NMT1/THI5 like BCJMU02_0661 PF02581 Thiamine monophosphate synthase BCJMU02_0662 PF01266 FAD dependent oxidoreductase BCJMU02_0663 PF02597 ThiS family BCJMU02_0664 PF05690 Thiazole biosynthesis protein ThiG BCJMU02_0665 PF00899 ThiF family BCJMU02_0666 PF08543 Phosphomethylpyrimidine kinase BCJMU02_0670 PF03814 Potassium-transporting ATPase A subunit BCJMU02_0672 PF02669 K+-transporting ATPase, c chain BCJMU02_0673 PF02702 Osmosensitive K+ channel His kinase sensor domain BCJMU02_0674 PF07690 Major Facilitator Superfamily BCJMU02_0675 PF01047 MarR family BCJMU02_0680 PF12704 MacB-like periplasmic core domain BCJMU02_0680 PF02687 FtsX-like permease family BCJMU02_0680 PF00005 ABC transporter BCJMU02_0682 PF00860 Permease family BCJMU02_0686 PF00294 pfkB family carbohydrate kinase BCJMU02_0687 PF08244 Glycosyl hydrolases family 32 C terminal BCJMU02_0687 PF00251 Glycosyl hydrolases family 32 N-terminal domain BCJMU02_0688 PF00367 phosphotransferase system, EIIB BCJMU02_0688 PF02378 Phosphotransferase system, EIIC BCJMU02_0689 PF13407 Periplasmic binding protein domain BCJMU02_0689 PF00356 Bacterial regulatory proteins, lacI family BCJMU02_0691 PF00085 Thioredoxin BCJMU02_0692 PF02600 Disulfide bond formation protein DsbB BCJMU02_0693 PF14148 YhdB-like protein BCJMU02_0695 PF03845 Spore germination protein BCJMU02_0697 PF03323 Bacillus/Clostridium GerA spore germination protein BCJMU02_0699 PF00881 Nitroreductase family BCJMU02_0700 PF04293 SpoVR like protein BCJMU02_0701 PF07992 Pyridine nucleotide-disulphide oxidoreductase BCJMU02_0701 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BCJMU02_0702 PF02583 Metal-sensitive transcriptional repressor BCJMU02_0703 PF01206 Sulfurtransferase TusA BCJMU02_0703 PF00581 Rhodanese-like domain BCJMU02_0704 PF00753 Metallo-beta-lactamase superfamily BCJMU02_0704 PF00581 Rhodanese-like domain BCJMU02_0705 PF01206 Sulfurtransferase TusA BCJMU02_0706 PF00581 Rhodanese-like domain BCJMU02_0708 PF13686 DsrE/DsrF/DrsH-like family BCJMU02_0709 PF01925 Sulfite exporter TauE/SafE BCJMU02_0711 PF03816 Cell envelope-related transcriptional attenuator domain BCJMU02_0712 PF00107 Zinc-binding dehydrogenase BCJMU02_0712 PF08240 Alcohol dehydrogenase GroES-like domain BCJMU02_0713 PF02690 Na+/Pi-cotransporter BCJMU02_0714 PF07690 Major Facilitator Superfamily BCJMU02_0716 PF00874 PRD domain BCJMU02_0716 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BCJMU02_0716 PF05043 Mga helix-turn-helix domain BCJMU02_0716 PF08279 HTH domain BCJMU02_0717 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit BCJMU02_0718 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BCJMU02_0719 PF02378 Phosphotransferase system, EIIC BCJMU02_0722 PF06725 3D domain BCJMU02_0722 PF01476 LysM domain BCJMU02_0723 PF02687 FtsX-like permease family BCJMU02_0723 PF12704 MacB-like periplasmic core domain BCJMU02_0724 PF00005 ABC transporter BCJMU02_0726 PF09529 Integral membrane protein (intg_mem_TP0381) BCJMU02_0729 PF02687 FtsX-like permease family BCJMU02_0730 PF05525 Branched-chain amino acid transport protein BCJMU02_0731 PF05067 Manganese containing catalase BCJMU02_0732 PF12652 CotJB protein BCJMU02_0733 PF11007 Spore coat associated protein JA (CotJA) BCJMU02_0736 PF02735 Ku70/Ku80 beta-barrel domain BCJMU02_0738 PF09335 SNARE associated Golgi protein BCJMU02_0746 PF13520 Amino acid permease BCJMU02_0748 PF00999 Sodium/hydrogen exchanger family BCJMU02_0750 PF01418 Helix-turn-helix domain, rpiR family BCJMU02_0750 PF01380 SIS domain BCJMU02_0751 PF01380 SIS domain BCJMU02_0752 PF02378 Phosphotransferase system, EIIC BCJMU02_0752 PF00367 phosphotransferase system, EIIB BCJMU02_0755 PF07681 DoxX BCJMU02_0758 PF00892 EamA-like transporter family BCJMU02_0759 PF01037 Lrp/AsnC ligand binding domain BCJMU02_0761 PF00893 Small Multidrug Resistance protein BCJMU02_0762 PF00893 Small Multidrug Resistance protein BCJMU02_0763 PF17934 Tetracyclin repressor-like, C-terminal domain BCJMU02_0763 PF00440 Bacterial regulatory proteins, tetR family BCJMU02_0764 PF07690 Major Facilitator Superfamily BCJMU02_0765 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BCJMU02_0765 PF12793 Sugar transport-related sRNA regulator N-term BCJMU02_0766 PF07690 Major Facilitator Superfamily BCJMU02_0768 PF01965 DJ-1/PfpI family BCJMU02_0769 PF06628 Catalase-related immune-responsive BCJMU02_0769 PF00199 Catalase BCJMU02_0769 PF18011 C-terminal domain found in long catalases BCJMU02_0771 PF13520 Amino acid permease BCJMU02_0772 PF01177 Asp/Glu/Hydantoin racemase BCJMU02_0774 PF00171 Aldehyde dehydrogenase family BCJMU02_0775 PF00005 ABC transporter BCJMU02_0775 PF00664 ABC transporter transmembrane region BCJMU02_0776 PF00005 ABC transporter BCJMU02_0776 PF00664 ABC transporter transmembrane region BCJMU02_0777 PF00497 Bacterial extracellular solute-binding proteins, family 3 BCJMU02_0778 PF00528 Binding-protein-dependent transport system inner membrane component BCJMU02_0779 PF00005 ABC transporter BCJMU02_0780 PF00269 Small, acid-soluble spore proteins, alpha/beta type BCJMU02_0782 PF14398 YheC/D like ATP-grasp BCJMU02_0784 PF04286 Protein of unknown function (DUF445) BCJMU02_0785 PF06133 Control of competence regulator ComK, YlbF/YmcA BCJMU02_0788 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BCJMU02_0788 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BCJMU02_0788 PF00205 Thiamine pyrophosphate enzyme, central domain BCJMU02_0789 PF03306 Alpha-acetolactate decarboxylase BCJMU02_0790 PF02245 Methylpurine-DNA glycosylase (MPG) BCJMU02_0792 PF01471 Putative peptidoglycan binding domain BCJMU02_0792 PF01510 N-acetylmuramoyl-L-alanine amidase BCJMU02_0793 PF04055 Radical SAM superfamily BCJMU02_0794 PF13193 AMP-binding enzyme C-terminal domain BCJMU02_0794 PF00501 AMP-binding enzyme BCJMU02_0796 PF00916 Sulfate permease family BCJMU02_0796 PF01740 STAS domain BCJMU02_0801 PF07516 SecA Wing and Scaffold domain BCJMU02_0801 PF01043 SecA preprotein cross-linking domain BCJMU02_0801 PF07517 SecA DEAD-like domain BCJMU02_0802 PF01943 Polysaccharide biosynthesis protein BCJMU02_0802 PF14667 Polysaccharide biosynthesis C-terminal domain BCJMU02_0805 PF00395 S-layer homology domain BCJMU02_0806 PF00395 S-layer homology domain BCJMU02_0808 PF03062 MBOAT, membrane-bound O-acyltransferase family BCJMU02_0810 PF00378 Enoyl-CoA hydratase/isomerase BCJMU02_0814 PF05343 M42 glutamyl aminopeptidase BCJMU02_0815 PF00395 S-layer homology domain BCJMU02_0815 PF01520 N-acetylmuramoyl-L-alanine amidase BCJMU02_0817 PF11121 Protein of unknown function (DUF2639) BCJMU02_0818 PF05544 Proline racemase BCJMU02_0819 PF02423 Ornithine cyclodeaminase/mu-crystallin family BCJMU02_0820 PF13333 Integrase core domain BCJMU02_0820 PF13276 HTH-like domain BCJMU02_0820 PF00665 Integrase core domain BCJMU02_0821 PF13333 Integrase core domain BCJMU02_0821 PF00665 Integrase core domain BCJMU02_0821 PF13276 HTH-like domain BCJMU02_0823 PF00004 ATPase family associated with various cellular activities (AAA) BCJMU02_0823 PF17866 AAA lid domain BCJMU02_0827 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BCJMU02_0828 PF00528 Binding-protein-dependent transport system inner membrane component BCJMU02_0829 PF00528 Binding-protein-dependent transport system inner membrane component BCJMU02_0829 PF12911 N-terminal TM domain of oligopeptide transport permease C BCJMU02_0830 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BCJMU02_0830 PF00005 ABC transporter BCJMU02_0831 PF00005 ABC transporter BCJMU02_0831 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BCJMU02_0835 PF00083 Sugar (and other) transporter BCJMU02_0837 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCJMU02_0837 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain BCJMU02_0838 PF12431 Transcriptional regulator BCJMU02_0838 PF08279 HTH domain BCJMU02_0838 PF00072 Response regulator receiver domain BCJMU02_0839 PF03401 Tripartite tricarboxylate transporter family receptor BCJMU02_0843 PF13538 UvrD-like helicase C-terminal domain BCJMU02_0852 PF00271 Helicase conserved C-terminal domain BCJMU02_0852 PF00176 SNF2 family N-terminal domain BCJMU02_0860 PF00350 Dynamin family BCJMU02_0861 PF00350 Dynamin family BCJMU02_0862 PF00350 Dynamin family BCJMU02_0866 PF03796 DnaB-like helicase C terminal domain BCJMU02_0866 PF00772 DnaB-like helicase N terminal domain BCJMU02_0868 PF01925 Sulfite exporter TauE/SafE BCJMU02_0877 PF07993 Male sterility protein BCJMU02_0877 PF00550 Phosphopantetheine attachment site BCJMU02_0878 PF18665 Tetracyclin repressor-like, C-terminal domain BCJMU02_0878 PF00440 Bacterial regulatory proteins, tetR family BCJMU02_0881 PF01066 CDP-alcohol phosphatidyltransferase BCJMU02_0887 PF02733 Dak1 domain BCJMU02_0889 PF02733 Dak1 domain BCJMU02_0891 PF18801 response regulator aspartate phosphatase H, N terminal BCJMU02_0894 PF00672 HAMP domain BCJMU02_0894 PF01966 HD domain BCJMU02_0899 PF00395 S-layer homology domain BCJMU02_0904 PF11181 Heat induced stress protein YflT BCJMU02_0905 PF05532 CsbD-like BCJMU02_0908 PF01740 STAS domain BCJMU02_0909 PF13581 Histidine kinase-like ATPase domain BCJMU02_0910 PF04545 Sigma-70, region 4 BCJMU02_0910 PF04542 Sigma-70 region 2 BCJMU02_0910 PF04539 Sigma-70 region 3 BCJMU02_0912 PF07228 Stage II sporulation protein E (SpoIIE) BCJMU02_0912 PF13426 PAS domain BCJMU02_0913 PF01739 CheR methyltransferase, SAM binding domain BCJMU02_0913 PF03705 CheR methyltransferase, all-alpha domain BCJMU02_0914 PF00072 Response regulator receiver domain BCJMU02_0914 PF00497 Bacterial extracellular solute-binding proteins, family 3 BCJMU02_0914 PF01627 Hpt domain BCJMU02_0914 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCJMU02_0914 PF00512 His Kinase A (phospho-acceptor) domain BCJMU02_0919 PF01906 Putative heavy-metal-binding BCJMU02_0921 PF08240 Alcohol dehydrogenase GroES-like domain BCJMU02_0921 PF00107 Zinc-binding dehydrogenase BCJMU02_0924 PF11121 Protein of unknown function (DUF2639) BCJMU02_0927 PF00149 Calcineurin-like phosphoesterase BCJMU02_0928 PF13514 AAA domain BCJMU02_0929 PF01966 HD domain BCJMU02_0929 PF01336 OB-fold nucleic acid binding domain BCJMU02_0934 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BCJMU02_0935 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BCJMU02_0936 PF17874 MalT-like TPR region BCJMU02_0936 PF18801 response regulator aspartate phosphatase H, N terminal BCJMU02_0938 PF00561 alpha/beta hydrolase fold BCJMU02_0938 PF08386 TAP-like protein BCJMU02_0942 PF04309 Glycerol-3-phosphate responsive antiterminator BCJMU02_0943 PF00230 Major intrinsic protein BCJMU02_0944 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BCJMU02_0944 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BCJMU02_0945 PF01266 FAD dependent oxidoreductase BCJMU02_0945 PF16901 C-terminal domain of alpha-glycerophosphate oxidase BCJMU02_0946 PF13276 HTH-like domain BCJMU02_0946 PF00665 Integrase core domain BCJMU02_0946 PF13333 Integrase core domain BCJMU02_0952 PF04542 Sigma-70 region 2 BCJMU02_0952 PF08281 Sigma-70, region 4 BCJMU02_0957 PF07690 Major Facilitator Superfamily BCJMU02_0958 PF07690 Major Facilitator Superfamily BCJMU02_0960 PF13538 UvrD-like helicase C-terminal domain BCJMU02_0964 PF01047 MarR family BCJMU02_0965 PF12732 YtxH-like protein BCJMU02_0966 PF01230 HIT domain BCJMU02_0967 PF00005 ABC transporter BCJMU02_0968 PF05975 Bacterial ABC transporter protein EcsB BCJMU02_0969 PF12787 EcsC protein family BCJMU02_0978 PF17934 Tetracyclin repressor-like, C-terminal domain BCJMU02_0978 PF00440 Bacterial regulatory proteins, tetR family BCJMU02_0980 PF03703 Bacterial PH domain BCJMU02_0981 PF03703 Bacterial PH domain BCJMU02_0984 PF00881 Nitroreductase family BCJMU02_0990 PF03703 Bacterial PH domain BCJMU02_0991 PF03703 Bacterial PH domain BCJMU02_0992 PF03992 Antibiotic biosynthesis monooxygenase BCJMU02_0993 PF00912 Transglycosylase BCJMU02_0993 PF00905 Penicillin binding protein transpeptidase domain BCJMU02_0994 PF01208 Uroporphyrinogen decarboxylase (URO-D) BCJMU02_0995 PF00762 Ferrochelatase BCJMU02_0996 PF01593 Flavin containing amine oxidoreductase BCJMU02_1002 PF03965 Penicillinase repressor BCJMU02_1004 PF00440 Bacterial regulatory proteins, tetR family BCJMU02_1004 PF17932 Tetracyclin repressor-like, C-terminal domain BCJMU02_1009 PF00356 Bacterial regulatory proteins, lacI family BCJMU02_1010 PF14149 YhfH-like protein BCJMU02_1011 PF12706 Beta-lactamase superfamily domain BCJMU02_1012 PF03099 Biotin/lipoate A/B protein ligase family BCJMU02_1012 PF10437 Bacterial lipoate protein ligase C-terminus BCJMU02_1014 PF00501 AMP-binding enzyme BCJMU02_1014 PF13193 AMP-binding enzyme C-terminal domain BCJMU02_1016 PF01520 N-acetylmuramoyl-L-alanine amidase BCJMU02_1016 PF00395 S-layer homology domain BCJMU02_1018 PF05593 RHS Repeat BCJMU02_1026 PF12146 Serine aminopeptidase, S33 BCJMU02_1027 PF00149 Calcineurin-like phosphoesterase BCJMU02_1029 PF01966 HD domain BCJMU02_1031 PF08281 Sigma-70, region 4 BCJMU02_1031 PF04542 Sigma-70 region 2 BCJMU02_1032 PF12833 Helix-turn-helix domain BCJMU02_1032 PF06445 GyrI-like small molecule binding domain BCJMU02_1033 PF00512 His Kinase A (phospho-acceptor) domain BCJMU02_1033 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCJMU02_1034 PF00486 Transcriptional regulatory protein, C terminal BCJMU02_1034 PF00072 Response regulator receiver domain BCJMU02_1038 PF01435 Peptidase family M48 BCJMU02_1038 PF16491 CAAX prenyl protease N-terminal, five membrane helices BCJMU02_1039 PF00892 EamA-like transporter family BCJMU02_1040 PF00150 Cellulase (glycosyl hydrolase family 5) BCJMU02_1040 PF00395 S-layer homology domain BCJMU02_1040 PF03424 Carbohydrate binding domain (family 17/28) BCJMU02_1043 PF01274 Malate synthase BCJMU02_1044 PF00463 Isocitrate lyase family BCJMU02_1046 PF00313 'Cold-shock' DNA-binding domain BCJMU02_1049 PF06338 ComK protein BCJMU02_1050 PF09335 SNARE associated Golgi protein BCJMU02_1051 PF10502 Signal peptidase, peptidase S26 BCJMU02_1052 PF12705 PD-(D/E)XK nuclease superfamily BCJMU02_1052 PF13361 UvrD-like helicase C-terminal domain BCJMU02_1053 PF12705 PD-(D/E)XK nuclease superfamily BCJMU02_1053 PF13361 UvrD-like helicase C-terminal domain BCJMU02_1053 PF00580 UvrD/REP helicase N-terminal domain BCJMU02_1055 PF10676 Spore germination protein gerPA/gerPF BCJMU02_1056 PF10970 Spore germination protein GerPE BCJMU02_1058 PF10737 Spore germination protein GerPC BCJMU02_1059 PF10803 Spore germination GerPB BCJMU02_1060 PF10676 Spore germination protein gerPA/gerPF BCJMU02_1061 PF09388 Spo0E like sporulation regulatory protein BCJMU02_1062 PF01557 Fumarylacetoacetate (FAA) hydrolase family BCJMU02_1064 PF00202 Aminotransferase class-III BCJMU02_1065 PF07457 Protein of unknown function (DUF1516) BCJMU02_1067 PF13537 Glutamine amidotransferase domain BCJMU02_1067 PF00733 Asparagine synthase BCJMU02_1068 PF00762 Ferrochelatase BCJMU02_1069 PF00199 Catalase BCJMU02_1069 PF06628 Catalase-related immune-responsive BCJMU02_1070 PF00909 Ammonium Transporter Family BCJMU02_1072 PF00128 Alpha amylase, catalytic domain BCJMU02_1075 PF04461 Protein of unknown function (DUF520) BCJMU02_1076 PF17783 CvfB-like winged helix domain BCJMU02_1076 PF13509 S1 domain BCJMU02_1078 PF00639 PPIC-type PPIASE domain BCJMU02_1080 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BCJMU02_1080 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BCJMU02_1081 PF12758 Protein of unknown function (DUF3813) BCJMU02_1084 PF14168 YjzC-like protein BCJMU02_1085 PF00004 ATPase family associated with various cellular activities (AAA) BCJMU02_1085 PF10431 C-terminal, D2-small domain, of ClpB protein BCJMU02_1085 PF02861 Clp amino terminal domain, pathogenicity island component BCJMU02_1085 PF07724 AAA domain (Cdc48 subfamily) BCJMU02_1085 PF17871 AAA lid domain BCJMU02_1089 PF10815 ComZ BCJMU02_1090 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BCJMU02_1090 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BCJMU02_1091 PF00109 Beta-ketoacyl synthase, N-terminal domain BCJMU02_1091 PF02801 Beta-ketoacyl synthase, C-terminal domain BCJMU02_1092 PF10026 Predicted Zn-dependent protease (DUF2268) BCJMU02_1093 PF12227 Protein of unknown function (DUF3603) BCJMU02_1094 PF00579 tRNA synthetases class I (W and Y) BCJMU02_1096 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BCJMU02_1097 PF00528 Binding-protein-dependent transport system inner membrane component BCJMU02_1098 PF00528 Binding-protein-dependent transport system inner membrane component BCJMU02_1098 PF12911 N-terminal TM domain of oligopeptide transport permease C BCJMU02_1099 PF00005 ABC transporter BCJMU02_1099 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BCJMU02_1100 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BCJMU02_1100 PF00005 ABC transporter BCJMU02_1101 PF01554 MatE BCJMU02_1102 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BCJMU02_1105 PF03960 ArsC family BCJMU02_1106 PF03741 Integral membrane protein TerC family BCJMU02_1107 PF05389 Negative regulator of genetic competence (MecA) BCJMU02_1108 PF13396 Phospholipase_D-nuclease N-terminal BCJMU02_1108 PF13091 PLD-like domain BCJMU02_1110 PF08439 Oligopeptidase F BCJMU02_1110 PF01432 Peptidase family M3 BCJMU02_1113 PF01152 Bacterial-like globin BCJMU02_1114 PF01928 CYTH domain BCJMU02_1116 PF04607 Region found in RelA / SpoT proteins BCJMU02_1117 PF01513 ATP-NAD kinase BCJMU02_1118 PF00849 RNA pseudouridylate synthase BCJMU02_1120 PF00149 Calcineurin-like phosphoesterase BCJMU02_1121 PF01098 Cell cycle protein BCJMU02_1122 PF00535 Glycosyl transferase family 2 BCJMU02_1123 PF08241 Methyltransferase domain BCJMU02_1124 PF05711 Macrocin-O-methyltransferase (TylF) BCJMU02_1126 PF00535 Glycosyl transferase family 2 BCJMU02_1126 PF13181 Tetratricopeptide repeat BCJMU02_1131 PF00483 Nucleotidyl transferase BCJMU02_1132 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase BCJMU02_1133 PF16363 GDP-mannose 4,6 dehydratase BCJMU02_1134 PF04321 RmlD substrate binding domain BCJMU02_1139 PF07098 Protein of unknown function (DUF1360) BCJMU02_1143 PF07098 Protein of unknown function (DUF1360) BCJMU02_1147 PF00580 UvrD/REP helicase N-terminal domain BCJMU02_1147 PF13361 UvrD-like helicase C-terminal domain BCJMU02_1148 PF13673 Acetyltransferase (GNAT) domain BCJMU02_1150 PF00756 Putative esterase BCJMU02_1153 PF02368 Bacterial Ig-like domain (group 2) BCJMU02_1154 PF00474 Sodium:solute symporter family BCJMU02_1155 PF00425 chorismate binding enzyme BCJMU02_1155 PF04715 Anthranilate synthase component I, N terminal region BCJMU02_1156 PF02885 Glycosyl transferase family, helical bundle domain BCJMU02_1156 PF00591 Glycosyl transferase family, a/b domain BCJMU02_1156 PF00117 Glutamine amidotransferase class-I BCJMU02_1157 PF02885 Glycosyl transferase family, helical bundle domain BCJMU02_1157 PF00591 Glycosyl transferase family, a/b domain BCJMU02_1158 PF00218 Indole-3-glycerol phosphate synthase BCJMU02_1159 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase BCJMU02_1160 PF00291 Pyridoxal-phosphate dependent enzyme BCJMU02_1161 PF00290 Tryptophan synthase alpha chain BCJMU02_1163 PF02652 L-lactate permease BCJMU02_1164 PF10042 Uncharacterized conserved protein (DUF2278) BCJMU02_1168 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BCJMU02_1168 PF07992 Pyridine nucleotide-disulphide oxidoreductase BCJMU02_1174 PF00364 Biotin-requiring enzyme BCJMU02_1174 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BCJMU02_1174 PF02817 e3 binding domain BCJMU02_1175 PF00676 Dehydrogenase E1 component BCJMU02_1175 PF16870 2-oxoglutarate dehydrogenase C-terminal BCJMU02_1175 PF02779 Transketolase, pyrimidine binding domain BCJMU02_1176 PF01381 Helix-turn-helix BCJMU02_1195 PF00202 Aminotransferase class-III BCJMU02_1198 PF00005 ABC transporter BCJMU02_1198 PF13732 Domain of unknown function (DUF4162) BCJMU02_1210 PF13614 AAA domain BCJMU02_1211 PF02796 Helix-turn-helix domain of resolvase BCJMU02_1211 PF00239 Resolvase, N terminal domain BCJMU02_1216 PF02899 Phage integrase, N-terminal SAM-like domain BCJMU02_1216 PF00589 Phage integrase family BCJMU02_1218 PF13649 Methyltransferase domain BCJMU02_1220 PF07943 Penicillin-binding protein 5, C-terminal domain BCJMU02_1220 PF00768 D-alanyl-D-alanine carboxypeptidase BCJMU02_1222 PF12389 Camelysin metallo-endopeptidase BCJMU02_1225 PF12389 Camelysin metallo-endopeptidase BCJMU02_1226 PF08671 Anti-repressor SinI BCJMU02_1226 PF01381 Helix-turn-helix BCJMU02_1228 PF05547 Immune inhibitor A peptidase M6 BCJMU02_1229 PF00171 Aldehyde dehydrogenase family BCJMU02_1230 PF08402 TOBE domain BCJMU02_1230 PF00005 ABC transporter BCJMU02_1231 PF00528 Binding-protein-dependent transport system inner membrane component BCJMU02_1232 PF00528 Binding-protein-dependent transport system inner membrane component BCJMU02_1233 PF13416 Bacterial extracellular solute-binding protein BCJMU02_1235 PF03176 MMPL family BCJMU02_1236 PF01609 Transposase DDE domain BCJMU02_1243 PF00589 Phage integrase family BCJMU02_1243 PF02899 Phage integrase, N-terminal SAM-like domain BCJMU02_1246 PF01479 S4 domain BCJMU02_1246 PF00849 RNA pseudouridylate synthase BCJMU02_1248 PF00188 Cysteine-rich secretory protein family BCJMU02_1249 PF02754 Cysteine-rich domain BCJMU02_1249 PF13183 4Fe-4S dicluster domain BCJMU02_1250 PF02913 FAD linked oxidases, C-terminal domain BCJMU02_1250 PF01565 FAD binding domain BCJMU02_1251 PF13556 PucR C-terminal helix-turn-helix domain BCJMU02_1251 PF17853 GGDEF-like domain BCJMU02_1251 PF05651 Putative sugar diacid recognition BCJMU02_1253 PF00072 Response regulator receiver domain BCJMU02_1253 PF00486 Transcriptional regulatory protein, C terminal BCJMU02_1254 PF00989 PAS fold BCJMU02_1254 PF00512 His Kinase A (phospho-acceptor) domain BCJMU02_1254 PF18698 Histidine kinase sensor domain BCJMU02_1254 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCJMU02_1254 PF00672 HAMP domain BCJMU02_1255 PF07729 FCD domain BCJMU02_1255 PF00392 Bacterial regulatory proteins, gntR family BCJMU02_1256 PF02754 Cysteine-rich domain BCJMU02_1257 PF11870 Domain of unknown function (DUF3390) BCJMU02_1257 PF13183 4Fe-4S dicluster domain BCJMU02_1257 PF02589 LUD domain BCJMU02_1258 PF02589 LUD domain BCJMU02_1259 PF01478 Type IV leader peptidase family BCJMU02_1259 PF06750 Bacterial Peptidase A24 N-terminal domain BCJMU02_1261 PF01226 Formate/nitrite transporter BCJMU02_1262 PF03741 Integral membrane protein TerC family BCJMU02_1263 PF02386 Cation transport protein BCJMU02_1264 PF00269 Small, acid-soluble spore proteins, alpha/beta type BCJMU02_1265 PF01575 MaoC like domain BCJMU02_1270 PF00561 alpha/beta hydrolase fold BCJMU02_1271 PF01266 FAD dependent oxidoreductase BCJMU02_1272 PF02386 Cation transport protein BCJMU02_1276 PF00005 ABC transporter BCJMU02_1276 PF08402 TOBE domain BCJMU02_1277 PF00528 Binding-protein-dependent transport system inner membrane component BCJMU02_1278 PF13419 Haloacid dehalogenase-like hydrolase BCJMU02_1279 PF00266 Aminotransferase class-V BCJMU02_1281 PF00455 DeoR C terminal sensor domain BCJMU02_1281 PF08220 DeoR-like helix-turn-helix domain BCJMU02_1284 PF00395 S-layer homology domain BCJMU02_1284 PF01520 N-acetylmuramoyl-L-alanine amidase BCJMU02_1285 PF00596 Class II Aldolase and Adducin N-terminal domain BCJMU02_1287 PF04748 Divergent polysaccharide deacetylase BCJMU02_1288 PF09388 Spo0E like sporulation regulatory protein BCJMU02_1289 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCJMU02_1289 PF00512 His Kinase A (phospho-acceptor) domain BCJMU02_1289 PF02743 Cache domain BCJMU02_1290 PF01047 MarR family BCJMU02_1292 PF12867 DinB superfamily BCJMU02_1293 PF00989 PAS fold BCJMU02_1293 PF00512 His Kinase A (phospho-acceptor) domain BCJMU02_1293 PF13426 PAS domain BCJMU02_1293 PF13188 PAS domain BCJMU02_1293 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCJMU02_1294 PF06508 Queuosine biosynthesis protein QueC BCJMU02_1295 PF01242 6-pyruvoyl tetrahydropterin synthase BCJMU02_1296 PF04055 Radical SAM superfamily BCJMU02_1297 PF14489 QueF-like protein BCJMU02_1298 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) BCJMU02_1304 PF07972 NrdI Flavodoxin like BCJMU02_1305 PF00317 Ribonucleotide reductase, all-alpha domain BCJMU02_1305 PF08343 Ribonucleotide reductase N-terminal BCJMU02_1305 PF02867 Ribonucleotide reductase, barrel domain BCJMU02_1306 PF02867 Ribonucleotide reductase, barrel domain BCJMU02_1306 PF14528 LAGLIDADG-like domain BCJMU02_1306 PF00317 Ribonucleotide reductase, all-alpha domain BCJMU02_1306 PF08343 Ribonucleotide reductase N-terminal BCJMU02_1307 PF00268 Ribonucleotide reductase, small chain BCJMU02_1308 PF00392 Bacterial regulatory proteins, gntR family BCJMU02_1309 PF00005 ABC transporter BCJMU02_1312 PF00005 ABC transporter BCJMU02_1316 PF01037 Lrp/AsnC ligand binding domain BCJMU02_1318 PF00857 Isochorismatase family BCJMU02_1320 PF17676 LD-carboxypeptidase C-terminal domain BCJMU02_1320 PF02016 LD-carboxypeptidase N-terminal domain BCJMU02_1321 PF03060 Nitronate monooxygenase BCJMU02_1322 PF04914 DltD protein BCJMU02_1323 PF00550 Phosphopantetheine attachment site BCJMU02_1324 PF03062 MBOAT, membrane-bound O-acyltransferase family BCJMU02_1325 PF13193 AMP-binding enzyme C-terminal domain BCJMU02_1325 PF00501 AMP-binding enzyme BCJMU02_1326 PF07687 Peptidase dimerisation domain BCJMU02_1326 PF01546 Peptidase family M20/M25/M40 BCJMU02_1328 PF00258 Flavodoxin BCJMU02_1331 PF01636 Phosphotransferase enzyme family BCJMU02_1335 PF01554 MatE BCJMU02_1336 PF02673 Bacitracin resistance protein BacA BCJMU02_1339 PF01047 MarR family BCJMU02_1341 PF00375 Sodium:dicarboxylate symporter family BCJMU02_1342 PF02386 Cation transport protein BCJMU02_1344 PF09579 Sporulation protein YtfJ (Spore_YtfJ) BCJMU02_1345 PF03698 Uncharacterised protein family (UPF0180) BCJMU02_1348 PF01063 Amino-transferase class IV BCJMU02_1349 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BCJMU02_1349 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BCJMU02_1349 PF00205 Thiamine pyrophosphate enzyme, central domain BCJMU02_1350 PF10369 Small subunit of acetolactate synthase BCJMU02_1350 PF01842 ACT domain BCJMU02_1351 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain BCJMU02_1351 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain BCJMU02_1352 PF08502 LeuA allosteric (dimerisation) domain BCJMU02_1352 PF00682 HMGL-like BCJMU02_1353 PF00180 Isocitrate/isopropylmalate dehydrogenase BCJMU02_1354 PF00330 Aconitase family (aconitate hydratase) BCJMU02_1355 PF00694 Aconitase C-terminal domain BCJMU02_1356 PF13393 Histidyl-tRNA synthetase BCJMU02_1357 PF01634 ATP phosphoribosyltransferase BCJMU02_1358 PF00815 Histidinol dehydrogenase BCJMU02_1359 PF00475 Imidazoleglycerol-phosphate dehydratase BCJMU02_1360 PF00117 Glutamine amidotransferase class-I BCJMU02_1361 PF00977 Histidine biosynthesis protein BCJMU02_1362 PF00977 Histidine biosynthesis protein BCJMU02_1363 PF01502 Phosphoribosyl-AMP cyclohydrolase BCJMU02_1364 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase BCJMU02_1365 PF02811 PHP domain BCJMU02_1367 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BCJMU02_1367 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BCJMU02_1368 PF01066 CDP-alcohol phosphatidyltransferase BCJMU02_1369 PF00884 Sulfatase BCJMU02_1371 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain BCJMU02_1371 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BCJMU02_1373 PF01507 Phosphoadenosine phosphosulfate reductase family BCJMU02_1374 PF01747 ATP-sulfurylase BCJMU02_1374 PF14306 PUA-like domain BCJMU02_1376 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BCJMU02_1376 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BCJMU02_1378 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BCJMU02_1379 PF01903 CbiX BCJMU02_1381 PF00209 Sodium:neurotransmitter symporter family BCJMU02_1383 PF00375 Sodium:dicarboxylate symporter family BCJMU02_1385 PF03553 Na+/H+ antiporter family BCJMU02_1388 PF09922 Cell wall-active antibiotics response 4TMS YvqF BCJMU02_1389 PF00672 HAMP domain BCJMU02_1389 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCJMU02_1389 PF07730 Histidine kinase BCJMU02_1390 PF00196 Bacterial regulatory proteins, luxR family BCJMU02_1390 PF00072 Response regulator receiver domain BCJMU02_1392 PF05525 Branched-chain amino acid transport protein BCJMU02_1394 PF08241 Methyltransferase domain BCJMU02_1399 PF00175 Oxidoreductase NAD-binding domain BCJMU02_1399 PF00042 Globin BCJMU02_1399 PF00970 Oxidoreductase FAD-binding domain BCJMU02_1402 PF01925 Sulfite exporter TauE/SafE BCJMU02_1403 PF01384 Phosphate transporter family BCJMU02_1404 PF01865 Protein of unknown function DUF47 BCJMU02_1405 PF00912 Transglycosylase BCJMU02_1405 PF00905 Penicillin binding protein transpeptidase domain BCJMU02_1410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCJMU02_1410 PF00989 PAS fold BCJMU02_1410 PF00512 His Kinase A (phospho-acceptor) domain BCJMU02_1411 PF01904 Protein of unknown function DUF72 BCJMU02_1413 PF00589 Phage integrase family BCJMU02_1414 PF16736 Single Cache-like BCJMU02_1414 PF00512 His Kinase A (phospho-acceptor) domain BCJMU02_1414 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCJMU02_1414 PF00989 PAS fold BCJMU02_1415 PF01048 Phosphorylase superfamily BCJMU02_1417 PF09924 Uncharacterised conserved protein (DUF2156) BCJMU02_1417 PF03706 Lysylphosphatidylglycerol synthase TM region BCJMU02_1420 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BCJMU02_1420 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BCJMU02_1421 PF00768 D-alanyl-D-alanine carboxypeptidase BCJMU02_1421 PF07943 Penicillin-binding protein 5, C-terminal domain BCJMU02_1422 PF07670 Nucleoside recognition BCJMU02_1423 PF07670 Nucleoside recognition BCJMU02_1424 PF00849 RNA pseudouridylate synthase BCJMU02_1424 PF01479 S4 domain BCJMU02_1425 PF00578 AhpC/TSA family BCJMU02_1426 PF05140 ResB-like family BCJMU02_1427 PF01578 Cytochrome C assembly protein BCJMU02_1428 PF00072 Response regulator receiver domain BCJMU02_1428 PF00486 Transcriptional regulatory protein, C terminal BCJMU02_1429 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCJMU02_1429 PF00989 PAS fold BCJMU02_1429 PF00512 His Kinase A (phospho-acceptor) domain BCJMU02_1429 PF18698 Histidine kinase sensor domain BCJMU02_1429 PF00672 HAMP domain BCJMU02_1430 PF01923 Cobalamin adenosyltransferase BCJMU02_1431 PF01551 Peptidase family M23 BCJMU02_1433 PF12822 ECF transporter, substrate-specific component BCJMU02_1436 PF00271 Helicase conserved C-terminal domain BCJMU02_1436 PF00270 DEAD/DEAH box helicase BCJMU02_1437 PF02517 CPBP intramembrane metalloprotease BCJMU02_1439 PF00149 Calcineurin-like phosphoesterase BCJMU02_1440 PF13411 MerR HTH family regulatory protein BCJMU02_1440 PF02607 B12 binding domain BCJMU02_1440 PF02310 B12 binding domain BCJMU02_1441 PF05389 Negative regulator of genetic competence (MecA) BCJMU02_1442 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BCJMU02_1442 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BCJMU02_1447 PF17763 Glutaminase/Asparaginase C-terminal domain BCJMU02_1447 PF00710 Asparaginase, N-terminal BCJMU02_1448 PF02224 Cytidylate kinase BCJMU02_1449 PF00575 S1 RNA binding domain BCJMU02_1450 PF01070 FMN-dependent dehydrogenase BCJMU02_1451 PF14140 YpzI-like protein BCJMU02_1453 PF14045 YIEGIA protein BCJMU02_1455 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal BCJMU02_1455 PF01926 50S ribosome-binding GTPase BCJMU02_1456 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus BCJMU02_1456 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus BCJMU02_1458 PF10966 Protein of unknown function (DUF2768) BCJMU02_1460 PF09547 Stage IV sporulation protein A (spore_IV_A) BCJMU02_1461 PF00216 Bacterial DNA-binding protein BCJMU02_1462 PF01227 GTP cyclohydrolase I BCJMU02_1463 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 BCJMU02_1464 PF01209 ubiE/COQ5 methyltransferase family BCJMU02_1465 PF00348 Polyprenyl synthetase BCJMU02_1466 PF00334 Nucleoside diphosphate kinase BCJMU02_1467 PF01264 Chorismate synthase BCJMU02_1468 PF01761 3-dehydroquinate synthase BCJMU02_1469 PF00155 Aminotransferase class I and II BCJMU02_1471 PF08858 IDEAL domain BCJMU02_1471 PF08864 UPF0302 domain BCJMU02_1472 PF10673 Protein of unknown function (DUF2487) BCJMU02_1473 PF00355 Rieske [2Fe-2S] domain BCJMU02_1474 PF00033 Cytochrome b/b6/petB BCJMU02_1475 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BCJMU02_1475 PF00032 Cytochrome b(C-terminal)/b6/petD BCJMU02_1476 PF07187 Protein of unknown function (DUF1405) BCJMU02_1478 PF09577 Sporulation protein YpjB (SpoYpjB) BCJMU02_1479 PF04298 Putative neutral zinc metallopeptidase BCJMU02_1481 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BCJMU02_1481 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BCJMU02_1482 PF03819 MazG nucleotide pyrophosphohydrolase domain BCJMU02_1483 PF01113 Dihydrodipicolinate reductase, N-terminus BCJMU02_1483 PF05173 Dihydrodipicolinate reductase, C-terminus BCJMU02_1484 PF02142 MGS-like domain BCJMU02_1485 PF02585 GlcNAc-PI de-N-acetylase BCJMU02_1486 PF00534 Glycosyl transferases group 1 BCJMU02_1486 PF13439 Glycosyltransferase Family 4 BCJMU02_1487 PF13735 tRNA nucleotidyltransferase domain 2 putative BCJMU02_1487 PF12627 Probable RNA and SrmB- binding site of polymerase A BCJMU02_1487 PF01743 Poly A polymerase head domain BCJMU02_1488 PF08279 HTH domain BCJMU02_1488 PF03099 Biotin/lipoate A/B protein ligase family BCJMU02_1488 PF02237 Biotin protein ligase C terminal domain BCJMU02_1490 PF02548 Ketopantoate hydroxymethyltransferase BCJMU02_1491 PF02569 Pantoate-beta-alanine ligase BCJMU02_1492 PF02261 Aspartate decarboxylase BCJMU02_1493 PF00929 Exonuclease BCJMU02_1493 PF04851 Type III restriction enzyme, res subunit BCJMU02_1493 PF13307 Helicase C-terminal domain BCJMU02_1494 PF14084 Protein of unknown function (DUF4264) BCJMU02_1496 PF00155 Aminotransferase class I and II BCJMU02_1497 PF07261 Replication initiation and membrane attachment BCJMU02_1498 PF10576 Iron-sulfur binding domain of endonuclease III BCJMU02_1498 PF00633 Helix-hairpin-helix motif BCJMU02_1498 PF00730 HhH-GPD superfamily base excision DNA repair protein BCJMU02_1500 PF00912 Transglycosylase BCJMU02_1500 PF00905 Penicillin binding protein transpeptidase domain BCJMU02_1501 PF03838 Recombination protein U BCJMU02_1502 PF10720 Protein of unknown function (DUF2515) BCJMU02_1509 PF06908 YspA SLOG family BCJMU02_1510 PF05103 DivIVA protein BCJMU02_1511 PF01170 Putative RNA methylase family UPF0020 BCJMU02_1511 PF02926 THUMP domain BCJMU02_1513 PF13307 Helicase C-terminal domain BCJMU02_1514 PF02074 Carboxypeptidase Taq (M32) metallopeptidase BCJMU02_1516 PF01636 Phosphotransferase enzyme family BCJMU02_1517 PF00557 Metallopeptidase family M24 BCJMU02_1518 PF00156 Phosphoribosyl transferase domain BCJMU02_1519 PF00860 Permease family BCJMU02_1520 PF04235 Protein of unknown function (DUF418) BCJMU02_1522 PF00350 Dynamin family BCJMU02_1524 PF00583 Acetyltransferase (GNAT) family BCJMU02_1525 PF10752 Protein of unknown function (DUF2533) BCJMU02_1526 PF00581 Rhodanese-like domain BCJMU02_1529 PF03738 Glutathionylspermidine synthase preATP-grasp BCJMU02_1531 PF00690 Cation transporter/ATPase, N-terminus BCJMU02_1531 PF00689 Cation transporting ATPase, C-terminus BCJMU02_1532 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BCJMU02_1532 PF01367 5'-3' exonuclease, C-terminal SAM fold BCJMU02_1535 PF18014 Acetyltransferase (GNAT) domain BCJMU02_1535 PF13673 Acetyltransferase (GNAT) domain BCJMU02_1539 PF13456 Reverse transcriptase-like BCJMU02_1540 PF01263 Aldose 1-epimerase BCJMU02_1545 PF00313 'Cold-shock' DNA-binding domain BCJMU02_1546 PF08892 YqcI/YcgG family BCJMU02_1547 PF01810 LysE type translocator BCJMU02_1550 PF04341 Protein of unknown function, DUF485 BCJMU02_1551 PF00474 Sodium:solute symporter family BCJMU02_1552 PF00202 Aminotransferase class-III BCJMU02_1554 PF00999 Sodium/hydrogen exchanger family BCJMU02_1555 PF00753 Metallo-beta-lactamase superfamily BCJMU02_1555 PF17770 Ribonuclease J C-terminal domain BCJMU02_1555 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain BCJMU02_1556 PF06445 GyrI-like small molecule binding domain BCJMU02_1556 PF13411 MerR HTH family regulatory protein BCJMU02_1558 PF04239 Protein of unknown function (DUF421) BCJMU02_1559 PF02698 DUF218 domain BCJMU02_1561 PF00881 Nitroreductase family BCJMU02_1570 PF17209 Hfq protein BCJMU02_1572 PF01618 MotA/TolQ/ExbB proton channel family BCJMU02_1573 PF00691 OmpA family BCJMU02_1573 PF13677 Membrane MotB of proton-channel complex MotA/MotB BCJMU02_1574 PF00072 Response regulator receiver domain BCJMU02_1575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCJMU02_1575 PF07194 P2 response regulator binding domain BCJMU02_1575 PF01627 Hpt domain BCJMU02_1575 PF02895 Signal transducing histidine kinase, homodimeric domain BCJMU02_1575 PF01584 CheW-like domain BCJMU02_1576 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BCJMU02_1576 PF04509 CheC-like family BCJMU02_1579 PF01739 CheR methyltransferase, SAM binding domain BCJMU02_1579 PF03705 CheR methyltransferase, all-alpha domain BCJMU02_1583 PF00460 Flagella basal body rod protein BCJMU02_1583 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BCJMU02_1584 PF00700 Bacterial flagellin C-terminal helical region BCJMU02_1584 PF00669 Bacterial flagellin N-terminal helical region BCJMU02_1585 PF07195 Flagellar hook-associated protein 2 C-terminus BCJMU02_1585 PF07196 Flagellin hook IN motif BCJMU02_1585 PF02465 Flagellar hook-associated protein 2 N-terminus BCJMU02_1589 PF00460 Flagella basal body rod protein BCJMU02_1590 PF00460 Flagella basal body rod protein BCJMU02_1590 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BCJMU02_1591 PF02049 Flagellar hook-basal body complex protein FliE BCJMU02_1592 PF01514 Secretory protein of YscJ/FliF family BCJMU02_1592 PF08345 Flagellar M-ring protein C-terminal BCJMU02_1593 PF01706 FliG C-terminal domain BCJMU02_1593 PF14841 FliG middle domain BCJMU02_1593 PF14842 FliG N-terminal domain BCJMU02_1595 PF18269 T3SS EscN ATPase C-terminal domain BCJMU02_1595 PF02874 ATP synthase alpha/beta family, beta-barrel domain BCJMU02_1595 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BCJMU02_1599 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BCJMU02_1599 PF00460 Flagella basal body rod protein BCJMU02_1599 PF07559 Flagellar basal body protein FlaE BCJMU02_1603 PF00072 Response regulator receiver domain BCJMU02_1603 PF01584 CheW-like domain BCJMU02_1604 PF12181 DNA binding domain of the motility gene repressor (MogR) BCJMU02_1606 PF00669 Bacterial flagellin N-terminal helical region BCJMU02_1606 PF00700 Bacterial flagellin C-terminal helical region BCJMU02_1607 PF01464 Transglycosylase SLT domain BCJMU02_1609 PF02154 Flagellar motor switch protein FliM BCJMU02_1609 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BCJMU02_1610 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BCJMU02_1610 PF04509 CheC-like family BCJMU02_1612 PF00813 FliP family BCJMU02_1613 PF01313 Bacterial export proteins, family 3 BCJMU02_1615 PF01312 FlhB HrpN YscU SpaS Family BCJMU02_1616 PF00771 FHIPEP family BCJMU02_1617 PF00448 SRP54-type protein, GTPase domain BCJMU02_1618 PF00460 Flagella basal body rod protein BCJMU02_1618 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BCJMU02_1619 PF01411 tRNA synthetases class II (A) BCJMU02_1619 PF02272 DHHA1 domain BCJMU02_1619 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BCJMU02_1624 PF00440 Bacterial regulatory proteins, tetR family BCJMU02_1624 PF08360 QacR-like protein, C-terminal region BCJMU02_1625 PF17329 Family of unknown function (DUF5367) BCJMU02_1627 PF03992 Antibiotic biosynthesis monooxygenase BCJMU02_1628 PF08141 Small acid-soluble spore protein H family BCJMU02_1633 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BCJMU02_1633 PF03466 LysR substrate binding domain BCJMU02_1634 PF00005 ABC transporter BCJMU02_1634 PF08402 TOBE domain BCJMU02_1636 PF00528 Binding-protein-dependent transport system inner membrane component BCJMU02_1637 PF12706 Beta-lactamase superfamily domain BCJMU02_1637 PF00753 Metallo-beta-lactamase superfamily BCJMU02_1639 PF10787 Uncharacterised protein from bacillus cereus group BCJMU02_1644 PF07943 Penicillin-binding protein 5, C-terminal domain BCJMU02_1644 PF00768 D-alanyl-D-alanine carboxypeptidase BCJMU02_1646 PF00300 Histidine phosphatase superfamily (branch 1) BCJMU02_1648 PF00561 alpha/beta hydrolase fold BCJMU02_1650 PF01047 MarR family BCJMU02_1652 PF13537 Glutamine amidotransferase domain BCJMU02_1652 PF00733 Asparagine synthase BCJMU02_1656 PF16916 Dimerisation domain of Zinc Transporter BCJMU02_1656 PF01545 Cation efflux family BCJMU02_1658 PF07729 FCD domain BCJMU02_1658 PF00392 Bacterial regulatory proteins, gntR family BCJMU02_1659 PF00892 EamA-like transporter family BCJMU02_1660 PF02492 CobW/HypB/UreG, nucleotide-binding domain BCJMU02_1660 PF07683 Cobalamin synthesis protein cobW C-terminal domain BCJMU02_1662 PF03773 Predicted permease BCJMU02_1665 PF03553 Na+/H+ antiporter family BCJMU02_1666 PF10415 Fumarase C C-terminus BCJMU02_1666 PF00206 Lyase BCJMU02_1671 PF01554 MatE BCJMU02_1672 PF01554 MatE BCJMU02_1673 PF03575 Peptidase family S51 BCJMU02_1677 PF02683 Cytochrome C biogenesis protein transmembrane region BCJMU02_1678 PF00578 AhpC/TSA family BCJMU02_1682 PF00291 Pyridoxal-phosphate dependent enzyme BCJMU02_1683 PF04286 Protein of unknown function (DUF445) BCJMU02_1688 PF00196 Bacterial regulatory proteins, luxR family BCJMU02_1688 PF00072 Response regulator receiver domain BCJMU02_1689 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCJMU02_1689 PF07730 Histidine kinase BCJMU02_1689 PF13492 GAF domain BCJMU02_1689 PF13185 GAF domain BCJMU02_1690 PF00005 ABC transporter BCJMU02_1693 PF13091 PLD-like domain BCJMU02_1694 PF00696 Amino acid kinase family BCJMU02_1695 PF00375 Sodium:dicarboxylate symporter family BCJMU02_1696 PF10415 Fumarase C C-terminus BCJMU02_1696 PF00206 Lyase BCJMU02_1697 PF00390 Malic enzyme, N-terminal domain BCJMU02_1697 PF03949 Malic enzyme, NAD binding domain BCJMU02_1698 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCJMU02_1699 PF00072 Response regulator receiver domain BCJMU02_1699 PF08664 YcbB domain BCJMU02_1700 PF00271 Helicase conserved C-terminal domain BCJMU02_1700 PF00176 SNF2 family N-terminal domain BCJMU02_1700 PF04434 SWIM zinc finger BCJMU02_1702 PF03590 Aspartate-ammonia ligase BCJMU02_1703 PF01381 Helix-turn-helix BCJMU02_1704 PF13840 ACT domain BCJMU02_1704 PF00696 Amino acid kinase family BCJMU02_1706 PF13761 Domain of unknown function (DUF4166) BCJMU02_1707 PF14158 YndJ-like protein BCJMU02_1708 PF00293 NUDIX domain BCJMU02_1709 PF02368 Bacterial Ig-like domain (group 2) BCJMU02_1709 PF00395 S-layer homology domain BCJMU02_1713 PF02554 Carbon starvation protein CstA BCJMU02_1714 PF03976 Polyphosphate kinase 2 (PPK2) BCJMU02_1715 PF07690 Major Facilitator Superfamily BCJMU02_1716 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BCJMU02_1716 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BCJMU02_1717 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BCJMU02_1717 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BCJMU02_1719 PF16360 GTP-binding GTPase Middle Region BCJMU02_1719 PF13167 GTP-binding GTPase N-terminal BCJMU02_1719 PF01926 50S ribosome-binding GTPase BCJMU02_1720 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BCJMU02_1721 PF07690 Major Facilitator Superfamily BCJMU02_1722 PF00291 Pyridoxal-phosphate dependent enzyme BCJMU02_1725 PF01943 Polysaccharide biosynthesis protein BCJMU02_1725 PF14667 Polysaccharide biosynthesis C-terminal domain BCJMU02_1726 PF00209 Sodium:neurotransmitter symporter family BCJMU02_1727 PF03422 Carbohydrate binding module (family 6) BCJMU02_1727 PF00457 Glycosyl hydrolases family 11 BCJMU02_1727 PF01522 Polysaccharide deacetylase BCJMU02_1729 PF04239 Protein of unknown function (DUF421) BCJMU02_1732 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BCJMU02_1732 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BCJMU02_1735 PF01625 Peptide methionine sulfoxide reductase BCJMU02_1737 PF01063 Amino-transferase class IV BCJMU02_1738 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BCJMU02_1738 PF00205 Thiamine pyrophosphate enzyme, central domain BCJMU02_1738 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BCJMU02_1740 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain BCJMU02_1740 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain BCJMU02_1741 PF00920 Dehydratase family BCJMU02_1742 PF00291 Pyridoxal-phosphate dependent enzyme BCJMU02_1742 PF00585 C-terminal regulatory domain of Threonine dehydratase BCJMU02_1744 PF09587 Bacterial capsule synthesis protein PGA_cap BCJMU02_1747 PF07690 Major Facilitator Superfamily BCJMU02_1748 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase BCJMU02_1751 PF00144 Beta-lactamase BCJMU02_1752 PF00072 Response regulator receiver domain BCJMU02_1752 PF04397 LytTr DNA-binding domain BCJMU02_1753 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain BCJMU02_1753 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain BCJMU02_1756 PF01979 Amidohydrolase family BCJMU02_1757 PF14436 Bacterial EndoU nuclease BCJMU02_1757 PF04740 LXG domain of WXG superfamily BCJMU02_1760 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BCJMU02_1765 PF13186 Iron-sulfur cluster-binding domain BCJMU02_1765 PF04055 Radical SAM superfamily BCJMU02_1766 PF13302 Acetyltransferase (GNAT) domain BCJMU02_1767 PF00072 Response regulator receiver domain BCJMU02_1767 PF00486 Transcriptional regulatory protein, C terminal BCJMU02_1768 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCJMU02_1768 PF00512 His Kinase A (phospho-acceptor) domain BCJMU02_1771 PF01566 Natural resistance-associated macrophage protein BCJMU02_1772 PF00581 Rhodanese-like domain BCJMU02_1772 PF17773 UPF0176 acylphosphatase like domain BCJMU02_1772 PF12368 Rhodanase C-terminal BCJMU02_1774 PF08546 Ketopantoate reductase PanE/ApbA C terminal BCJMU02_1774 PF02558 Ketopantoate reductase PanE/ApbA BCJMU02_1776 PF13520 Amino acid permease BCJMU02_1778 PF05791 Bacillus haemolytic enterotoxin (HBL) BCJMU02_1779 PF05791 Bacillus haemolytic enterotoxin (HBL) BCJMU02_1781 PF07728 AAA domain (dynein-related subfamily) BCJMU02_1783 PF05762 VWA domain containing CoxE-like protein BCJMU02_1788 PF04198 Putative sugar-binding domain BCJMU02_1789 PF01791 DeoC/LacD family aldolase BCJMU02_1790 PF01773 Na+ dependent nucleoside transporter N-terminus BCJMU02_1790 PF07662 Na+ dependent nucleoside transporter C-terminus BCJMU02_1791 PF02885 Glycosyl transferase family, helical bundle domain BCJMU02_1791 PF00591 Glycosyl transferase family, a/b domain BCJMU02_1791 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain BCJMU02_1792 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BCJMU02_1793 PF07301 Protein of unknown function (DUF1453) BCJMU02_1794 PF05979 Bacterial protein of unknown function (DUF896) BCJMU02_1798 PF05195 Aminopeptidase P, N-terminal domain BCJMU02_1798 PF00557 Metallopeptidase family M24 BCJMU02_1799 PF07731 Multicopper oxidase BCJMU02_1799 PF00394 Multicopper oxidase BCJMU02_1799 PF07732 Multicopper oxidase BCJMU02_1800 PF01551 Peptidase family M23 BCJMU02_1802 PF01396 Topoisomerase DNA binding C4 zinc finger BCJMU02_1802 PF13342 C-terminal repeat of topoisomerase BCJMU02_1802 PF01131 DNA topoisomerase BCJMU02_1802 PF01751 Toprim domain BCJMU02_1805 PF02525 Flavodoxin-like fold BCJMU02_1806 PF05525 Branched-chain amino acid transport protein BCJMU02_1808 PF13115 YtkA-like BCJMU02_1808 PF05425 Copper resistance protein D BCJMU02_1808 PF04234 CopC domain BCJMU02_1809 PF07987 Domain of unkown function (DUF1775) BCJMU02_1810 PF00892 EamA-like transporter family BCJMU02_1811 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BCJMU02_1811 PF03466 LysR substrate binding domain BCJMU02_1812 PF02082 Transcriptional regulator BCJMU02_1813 PF01323 DSBA-like thioredoxin domain BCJMU02_1814 PF00881 Nitroreductase family BCJMU02_1816 PF01425 Amidase BCJMU02_1817 PF01594 AI-2E family transporter BCJMU02_1818 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BCJMU02_1818 PF00056 lactate/malate dehydrogenase, NAD binding domain BCJMU02_1819 PF01593 Flavin containing amine oxidoreductase BCJMU02_1820 PF02492 CobW/HypB/UreG, nucleotide-binding domain BCJMU02_1820 PF07683 Cobalamin synthesis protein cobW C-terminal domain BCJMU02_1823 PF13193 AMP-binding enzyme C-terminal domain BCJMU02_1823 PF00501 AMP-binding enzyme BCJMU02_1824 PF01575 MaoC like domain BCJMU02_1825 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BCJMU02_1825 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BCJMU02_1827 PF00005 ABC transporter BCJMU02_1827 PF12399 Branched-chain amino acid ATP-binding cassette transporter BCJMU02_1828 PF00005 ABC transporter BCJMU02_1829 PF02653 Branched-chain amino acid transport system / permease component BCJMU02_1831 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BCJMU02_1831 PF03466 LysR substrate binding domain BCJMU02_1833 PF14552 Tautomerase enzyme BCJMU02_1835 PF01047 MarR family BCJMU02_1837 PF01654 Cytochrome bd terminal oxidase subunit I BCJMU02_1838 PF02322 Cytochrome bd terminal oxidase subunit II BCJMU02_1839 PF00005 ABC transporter BCJMU02_1839 PF00664 ABC transporter transmembrane region BCJMU02_1840 PF00664 ABC transporter transmembrane region BCJMU02_1840 PF00005 ABC transporter BCJMU02_1843 PF02016 LD-carboxypeptidase N-terminal domain BCJMU02_1843 PF17676 LD-carboxypeptidase C-terminal domain BCJMU02_1844 PF00768 D-alanyl-D-alanine carboxypeptidase BCJMU02_1844 PF07943 Penicillin-binding protein 5, C-terminal domain BCJMU02_1847 PF00877 NlpC/P60 family BCJMU02_1847 PF01476 LysM domain BCJMU02_1849 PF00664 ABC transporter transmembrane region BCJMU02_1849 PF00005 ABC transporter BCJMU02_1850 PF00072 Response regulator receiver domain BCJMU02_1850 PF00486 Transcriptional regulatory protein, C terminal BCJMU02_1851 PF00672 HAMP domain BCJMU02_1851 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCJMU02_1851 PF00512 His Kinase A (phospho-acceptor) domain BCJMU02_1853 PF00106 short chain dehydrogenase BCJMU02_1854 PF01596 O-methyltransferase BCJMU02_1855 PF04439 Streptomycin adenylyltransferase BCJMU02_1856 PF01522 Polysaccharide deacetylase BCJMU02_1860 PF00742 Homoserine dehydrogenase BCJMU02_1860 PF03447 Homoserine dehydrogenase, NAD binding domain BCJMU02_1860 PF01842 ACT domain BCJMU02_1861 PF00291 Pyridoxal-phosphate dependent enzyme BCJMU02_1862 PF00288 GHMP kinases N terminal domain BCJMU02_1862 PF08544 GHMP kinases C terminal BCJMU02_1865 PF03816 Cell envelope-related transcriptional attenuator domain BCJMU02_1867 PF00072 Response regulator receiver domain BCJMU02_1867 PF00486 Transcriptional regulatory protein, C terminal BCJMU02_1868 PF16736 Single Cache-like BCJMU02_1868 PF00989 PAS fold BCJMU02_1868 PF00512 His Kinase A (phospho-acceptor) domain BCJMU02_1868 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCJMU02_1869 PF01522 Polysaccharide deacetylase BCJMU02_1871 PF02308 MgtC family BCJMU02_1872 PF00583 Acetyltransferase (GNAT) family BCJMU02_1873 PF06276 Ferric iron reductase FhuF-like transporter BCJMU02_1873 PF04183 IucA / IucC family BCJMU02_1874 PF04183 IucA / IucC family BCJMU02_1874 PF06276 Ferric iron reductase FhuF-like transporter BCJMU02_1875 PF13193 AMP-binding enzyme C-terminal domain BCJMU02_1875 PF00501 AMP-binding enzyme BCJMU02_1878 PF01261 Xylose isomerase-like TIM barrel BCJMU02_1879 PF00269 Small, acid-soluble spore proteins, alpha/beta type BCJMU02_1880 PF07690 Major Facilitator Superfamily BCJMU02_1881 PF01810 LysE type translocator BCJMU02_1882 PF00392 Bacterial regulatory proteins, gntR family BCJMU02_1882 PF00155 Aminotransferase class I and II BCJMU02_1884 PF01734 Patatin-like phospholipase BCJMU02_1889 PF00293 NUDIX domain BCJMU02_1889 PF13344 Haloacid dehalogenase-like hydrolase BCJMU02_1890 PF02540 NAD synthase BCJMU02_1891 PF02687 FtsX-like permease family BCJMU02_1892 PF18277 AbrB C-terminal domain BCJMU02_1892 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin BCJMU02_1893 PF00082 Subtilase family BCJMU02_1894 PF01022 Bacterial regulatory protein, arsR family BCJMU02_1895 PF00248 Aldo/keto reductase family BCJMU02_1896 PF07690 Major Facilitator Superfamily BCJMU02_1900 PF03193 RsgA GTPase BCJMU02_1901 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BCJMU02_1901 PF00672 HAMP domain BCJMU02_1901 PF02743 Cache domain BCJMU02_1905 PF00210 Ferritin-like domain BCJMU02_1908 PF00296 Luciferase-like monooxygenase BCJMU02_1910 PF01593 Flavin containing amine oxidoreductase BCJMU02_1912 PF00248 Aldo/keto reductase family BCJMU02_1913 PF02492 CobW/HypB/UreG, nucleotide-binding domain BCJMU02_1913 PF07683 Cobalamin synthesis protein cobW C-terminal domain BCJMU02_1914 PF00583 Acetyltransferase (GNAT) family BCJMU02_1917 PF14436 Bacterial EndoU nuclease BCJMU02_1917 PF04740 LXG domain of WXG superfamily BCJMU02_1918 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment BCJMU02_1918 PF01297 Zinc-uptake complex component A periplasmic BCJMU02_1920 PF13460 NAD(P)H-binding BCJMU02_1921 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BCJMU02_1922 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BCJMU02_1922 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain BCJMU02_1924 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BCJMU02_1925 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BCJMU02_1927 PF00300 Histidine phosphatase superfamily (branch 1) BCJMU02_1929 PF08757 CotH kinase protein BCJMU02_1930 PF00293 NUDIX domain BCJMU02_1931 PF09335 SNARE associated Golgi protein BCJMU02_1932 PF14667 Polysaccharide biosynthesis C-terminal domain BCJMU02_1932 PF01943 Polysaccharide biosynthesis protein BCJMU02_1934 PF03773 Predicted permease BCJMU02_1935 PF09323 Domain of unknown function (DUF1980) BCJMU02_1936 PF03061 Thioesterase superfamily BCJMU02_1937 PF13091 PLD-like domain BCJMU02_1937 PF13396 Phospholipase_D-nuclease N-terminal BCJMU02_1940 PF13460 NAD(P)H-binding BCJMU02_1941 PF04306 Protein of unknown function (DUF456) BCJMU02_1942 PF03471 Transporter associated domain BCJMU02_1942 PF00571 CBS domain BCJMU02_1942 PF01595 Cyclin M transmembrane N-terminal domain BCJMU02_1946 PF05525 Branched-chain amino acid transport protein BCJMU02_1947 PF01588 Putative tRNA binding domain BCJMU02_1950 PF07454 Stage II sporulation protein P (SpoIIP) BCJMU02_1952 PF02557 D-alanyl-D-alanine carboxypeptidase BCJMU02_1954 PF01425 Amidase BCJMU02_1955 PF07690 Major Facilitator Superfamily BCJMU02_1958 PF01145 SPFH domain / Band 7 family BCJMU02_1959 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal BCJMU02_1959 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal BCJMU02_1961 PF06574 FAD synthetase BCJMU02_1962 PF06052 3-hydroxyanthranilic acid dioxygenase BCJMU02_1964 PF01042 Endoribonuclease L-PSP BCJMU02_1965 PF00171 Aldehyde dehydrogenase family BCJMU02_1966 PF01557 Fumarylacetoacetate (FAA) hydrolase family BCJMU02_1967 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation BCJMU02_1967 PF01118 Semialdehyde dehydrogenase, NAD binding domain BCJMU02_1968 PF07836 DmpG-like communication domain BCJMU02_1968 PF00682 HMGL-like BCJMU02_1970 PF01361 Tautomerase enzyme BCJMU02_1971 PF00300 Histidine phosphatase superfamily (branch 1) BCJMU02_1974 PF00842 Alanine racemase, C-terminal domain BCJMU02_1974 PF01168 Alanine racemase, N-terminal domain BCJMU02_1976 PF00589 Phage integrase family BCJMU02_1976 PF02899 Phage integrase, N-terminal SAM-like domain BCJMU02_1983 PF01609 Transposase DDE domain BCJMU02_1984 PF13847 Methyltransferase domain BCJMU02_1987 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase BCJMU02_1988 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BCJMU02_1988 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BCJMU02_1989 PF00392 Bacterial regulatory proteins, gntR family BCJMU02_1989 PF00155 Aminotransferase class I and II BCJMU02_1995 PF00583 Acetyltransferase (GNAT) family BCJMU02_2013 PF09579 Sporulation protein YtfJ (Spore_YtfJ) BCJMU02_2018 PF01209 ubiE/COQ5 methyltransferase family BCJMU02_2019 PF01268 Formate--tetrahydrofolate ligase BCJMU02_2021 PF00271 Helicase conserved C-terminal domain BCJMU02_2021 PF00270 DEAD/DEAH box helicase BCJMU02_2022 PF01261 Xylose isomerase-like TIM barrel BCJMU02_2023 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BCJMU02_2025 PF08240 Alcohol dehydrogenase GroES-like domain BCJMU02_2025 PF00107 Zinc-binding dehydrogenase BCJMU02_2026 PF04542 Sigma-70 region 2 BCJMU02_2026 PF08281 Sigma-70, region 4 BCJMU02_2029 PF00258 Flavodoxin BCJMU02_2029 PF01613 Flavin reductase like domain BCJMU02_2031 PF00255 Glutathione peroxidase BCJMU02_2032 PF11992 Domain of unknown function (DUF3488) BCJMU02_2032 PF13559 Domain of unknown function (DUF4129) BCJMU02_2032 PF01841 Transglutaminase-like superfamily BCJMU02_2033 PF11992 Domain of unknown function (DUF3488) BCJMU02_2033 PF13559 Domain of unknown function (DUF4129) BCJMU02_2033 PF01841 Transglutaminase-like superfamily BCJMU02_2034 PF01882 Protein of unknown function DUF58 BCJMU02_2035 PF07726 ATPase family associated with various cellular activities (AAA) BCJMU02_2035 PF17863 AAA lid domain BCJMU02_2039 PF14710 Respiratory nitrate reductase alpha N-terminal BCJMU02_2039 PF01568 Molydopterin dinucleotide binding domain BCJMU02_2039 PF00384 Molybdopterin oxidoreductase BCJMU02_2040 PF13247 4Fe-4S dicluster domain BCJMU02_2040 PF14711 Respiratory nitrate reductase beta C-terminal BCJMU02_2041 PF02613 Nitrate reductase delta subunit BCJMU02_2042 PF02665 Nitrate reductase gamma subunit BCJMU02_2043 PF00027 Cyclic nucleotide-binding domain BCJMU02_2043 PF00325 Bacterial regulatory proteins, crp family BCJMU02_2044 PF06463 Molybdenum Cofactor Synthesis C BCJMU02_2044 PF04055 Radical SAM superfamily BCJMU02_2045 PF00899 ThiF family BCJMU02_2046 PF00994 Probable molybdopterin binding domain BCJMU02_2046 PF03454 MoeA C-terminal region (domain IV) BCJMU02_2046 PF03453 MoeA N-terminal region (domain I and II) BCJMU02_2047 PF02391 MoaE protein BCJMU02_2049 PF07690 Major Facilitator Superfamily BCJMU02_2052 PF01903 CbiX BCJMU02_2053 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BCJMU02_2054 PF00355 Rieske [2Fe-2S] domain BCJMU02_2055 PF18267 Rubredoxin NAD+ reductase C-terminal domain BCJMU02_2055 PF07992 Pyridine nucleotide-disulphide oxidoreductase BCJMU02_2055 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BCJMU02_2055 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BCJMU02_2055 PF04324 BFD-like [2Fe-2S] binding domain BCJMU02_2056 PF04405 Domain of Unknown function (DUF542) BCJMU02_2056 PF01814 Hemerythrin HHE cation binding domain BCJMU02_2061 PF04232 Stage V sporulation protein S (SpoVS) BCJMU02_2070 PF01510 N-acetylmuramoyl-L-alanine amidase BCJMU02_2072 PF18593 CdiI immunity protein BCJMU02_2075 PF01966 HD domain BCJMU02_2076 PF12848 ABC transporter BCJMU02_2076 PF16326 ABC transporter C-terminal domain BCJMU02_2076 PF00005 ABC transporter BCJMU02_2079 PF00436 Single-strand binding protein family BCJMU02_2081 PF01494 FAD binding domain BCJMU02_2082 PF13769 Virulence factor BCJMU02_2082 PF08712 Scaffold protein Nfu/NifU N terminal BCJMU02_2084 PF06491 Disulphide isomerase BCJMU02_2085 PF04445 Putative SAM-dependent methyltransferase BCJMU02_2086 PF00750 tRNA synthetases class I (R) BCJMU02_2086 PF05746 DALR anticodon binding domain BCJMU02_2086 PF03485 Arginyl tRNA synthetase N terminal domain BCJMU02_2090 PF08264 Anticodon-binding domain of tRNA BCJMU02_2090 PF00133 tRNA synthetases class I (I, L, M and V) BCJMU02_2093 PF02875 Mur ligase family, glutamate ligase domain BCJMU02_2093 PF01225 Mur ligase family, catalytic domain BCJMU02_2093 PF08245 Mur ligase middle domain BCJMU02_2094 PF01336 OB-fold nucleic acid binding domain BCJMU02_2094 PF00152 tRNA synthetases class II (D, K and N) BCJMU02_2098 PF12538 DNA transporter BCJMU02_2098 PF01580 FtsK/SpoIIIE family BCJMU02_2116 PF02595 Glycerate kinase family BCJMU02_2117 PF00939 Sodium:sulfate symporter transmembrane region BCJMU02_2118 PF00072 Response regulator receiver domain BCJMU02_2118 PF00486 Transcriptional regulatory protein, C terminal BCJMU02_2119 PF00512 His Kinase A (phospho-acceptor) domain BCJMU02_2119 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCJMU02_2119 PF00672 HAMP domain BCJMU02_2122 PF00209 Sodium:neurotransmitter symporter family BCJMU02_2125 PF10997 Alternate to MurJ BCJMU02_2126 PF13419 Haloacid dehalogenase-like hydrolase BCJMU02_2127 PF13419 Haloacid dehalogenase-like hydrolase BCJMU02_2129 PF00465 Iron-containing alcohol dehydrogenase BCJMU02_2130 PF01177 Asp/Glu/Hydantoin racemase BCJMU02_2131 PF01980 tRNA-methyltransferase O BCJMU02_2132 PF00583 Acetyltransferase (GNAT) family BCJMU02_2135 PF00005 ABC transporter BCJMU02_2136 PF05975 Bacterial ABC transporter protein EcsB BCJMU02_2137 PF14005 YpjP-like protein BCJMU02_2138 PF13419 Haloacid dehalogenase-like hydrolase BCJMU02_2142 PF00144 Beta-lactamase BCJMU02_2142 PF07930 D-aminopeptidase, domain B BCJMU02_2143 PF17389 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain BCJMU02_2143 PF17390 Bacterial alpha-L-rhamnosidase C-terminal domain BCJMU02_2143 PF08531 Alpha-L-rhamnosidase N-terminal domain BCJMU02_2143 PF05592 Bacterial alpha-L-rhamnosidase concanavalin-like domain BCJMU02_2144 PF00303 Thymidylate synthase BCJMU02_2145 PF00186 Dihydrofolate reductase BCJMU02_2146 PF00905 Penicillin binding protein transpeptidase domain BCJMU02_2146 PF05223 NTF2-like N-terminal transpeptidase domain BCJMU02_2146 PF03717 Penicillin-binding Protein dimerisation domain BCJMU02_2147 PF02525 Flavodoxin-like fold BCJMU02_2148 PF01553 Acyltransferase BCJMU02_2149 PF03006 Haemolysin-III related BCJMU02_2150 PF02416 mttA/Hcf106 family BCJMU02_2151 PF00902 Sec-independent protein translocase protein (TatC) BCJMU02_2153 PF02645 Uncharacterised protein, DegV family COG1307 BCJMU02_2155 PF02630 SCO1/SenC BCJMU02_2156 PF00011 Hsp20/alpha crystallin family BCJMU02_2157 PF13537 Glutamine amidotransferase domain BCJMU02_2157 PF00733 Asparagine synthase BCJMU02_2160 PF01497 Periplasmic binding protein BCJMU02_2161 PF01063 Amino-transferase class IV BCJMU02_2162 PF00881 Nitroreductase family BCJMU02_2165 PF00857 Isochorismatase family BCJMU02_2166 PF00293 NUDIX domain BCJMU02_2167 PF00011 Hsp20/alpha crystallin family BCJMU02_2168 PF00924 Mechanosensitive ion channel BCJMU02_2169 PF07730 Histidine kinase BCJMU02_2169 PF13185 GAF domain BCJMU02_2170 PF00072 Response regulator receiver domain BCJMU02_2170 PF00196 Bacterial regulatory proteins, luxR family BCJMU02_2171 PF01418 Helix-turn-helix domain, rpiR family BCJMU02_2171 PF01380 SIS domain BCJMU02_2172 PF08240 Alcohol dehydrogenase GroES-like domain BCJMU02_2172 PF00107 Zinc-binding dehydrogenase BCJMU02_2175 PF00144 Beta-lactamase BCJMU02_2177 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BCJMU02_2177 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BCJMU02_2178 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BCJMU02_2178 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BCJMU02_2181 PF03358 NADPH-dependent FMN reductase BCJMU02_2184 PF00571 CBS domain BCJMU02_2184 PF00005 ABC transporter BCJMU02_2185 PF00528 Binding-protein-dependent transport system inner membrane component BCJMU02_2186 PF13520 Amino acid permease BCJMU02_2192 PF01595 Cyclin M transmembrane N-terminal domain BCJMU02_2192 PF03471 Transporter associated domain BCJMU02_2192 PF00571 CBS domain BCJMU02_2193 PF00171 Aldehyde dehydrogenase family BCJMU02_2194 PF07997 Protein of unknown function (DUF1694) BCJMU02_2195 PF09385 Histidine kinase N terminal BCJMU02_2197 PF00202 Aminotransferase class-III BCJMU02_2198 PF01144 Coenzyme A transferase BCJMU02_2199 PF01144 Coenzyme A transferase BCJMU02_2200 PF01546 Peptidase family M20/M25/M40 BCJMU02_2200 PF07687 Peptidase dimerisation domain BCJMU02_2201 PF00583 Acetyltransferase (GNAT) family BCJMU02_2202 PF00158 Sigma-54 interaction domain BCJMU02_2202 PF13426 PAS domain BCJMU02_2202 PF02954 Bacterial regulatory protein, Fis family BCJMU02_2203 PF12544 Lysine-2,3-aminomutase BCJMU02_2204 PF14122 YokU-like protein, putative antitoxin BCJMU02_2205 PF06855 YozE SAM-like fold BCJMU02_2208 PF14162 YozD-like protein BCJMU02_2210 PF08239 Bacterial SH3 domain BCJMU02_2210 PF00069 Protein kinase domain BCJMU02_2211 PF07070 SpoOM protein BCJMU02_2212 PF01569 PAP2 superfamily BCJMU02_2213 PF01545 Cation efflux family BCJMU02_2213 PF16916 Dimerisation domain of Zinc Transporter BCJMU02_2214 PF00085 Thioredoxin BCJMU02_2231 PF10676 Spore germination protein gerPA/gerPF BCJMU02_2234 PF00106 short chain dehydrogenase BCJMU02_2238 PF00905 Penicillin binding protein transpeptidase domain BCJMU02_2238 PF00912 Transglycosylase BCJMU02_2240 PF07690 Major Facilitator Superfamily BCJMU02_2241 PF01521 Iron-sulphur cluster biosynthesis BCJMU02_2242 PF00285 Citrate synthase, C-terminal domain BCJMU02_2243 PF03972 MmgE/PrpD family BCJMU02_2245 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BCJMU02_2245 PF02770 Acyl-CoA dehydrogenase, middle domain BCJMU02_2245 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BCJMU02_2246 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BCJMU02_2246 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BCJMU02_2247 PF00171 Aldehyde dehydrogenase family BCJMU02_2248 PF01810 LysE type translocator BCJMU02_2249 PF00378 Enoyl-CoA hydratase/isomerase BCJMU02_2251 PF10763 Protein of unknown function (DUF2584) BCJMU02_2252 PF12320 Type 5 capsule protein repressor C-terminal domain BCJMU02_2252 PF00149 Calcineurin-like phosphoesterase BCJMU02_2253 PF13476 AAA domain BCJMU02_2255 PF01022 Bacterial regulatory protein, arsR family BCJMU02_2257 PF07690 Major Facilitator Superfamily BCJMU02_2258 PF00106 short chain dehydrogenase BCJMU02_2259 PF00425 chorismate binding enzyme BCJMU02_2260 PF13193 AMP-binding enzyme C-terminal domain BCJMU02_2260 PF00501 AMP-binding enzyme BCJMU02_2261 PF00550 Phosphopantetheine attachment site BCJMU02_2261 PF00857 Isochorismatase family BCJMU02_2262 PF00501 AMP-binding enzyme BCJMU02_2262 PF13193 AMP-binding enzyme C-terminal domain BCJMU02_2262 PF00668 Condensation domain BCJMU02_2262 PF00975 Thioesterase domain BCJMU02_2262 PF00550 Phosphopantetheine attachment site BCJMU02_2263 PF03621 MbtH-like protein BCJMU02_2264 PF07690 Major Facilitator Superfamily BCJMU02_2267 PF00216 Bacterial DNA-binding protein BCJMU02_2269 PF05163 DinB family BCJMU02_2270 PF00082 Subtilase family BCJMU02_2271 PF01235 Sodium:alanine symporter family BCJMU02_2274 PF16291 Domain of unknown function (DUF4937 BCJMU02_2275 PF00849 RNA pseudouridylate synthase BCJMU02_2275 PF01479 S4 domain BCJMU02_2276 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BCJMU02_2276 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BCJMU02_2276 PF02824 TGS domain BCJMU02_2276 PF03129 Anticodon binding domain BCJMU02_2278 PF00005 ABC transporter BCJMU02_2280 PF12146 Serine aminopeptidase, S33 BCJMU02_2281 PF07690 Major Facilitator Superfamily BCJMU02_2285 PF13649 Methyltransferase domain BCJMU02_2295 PF00753 Metallo-beta-lactamase superfamily BCJMU02_2295 PF16123 Hydroxyacylglutathione hydrolase C-terminus BCJMU02_2297 PF03176 MMPL family BCJMU02_2299 PF00302 Chloramphenicol acetyltransferase BCJMU02_2302 PF00583 Acetyltransferase (GNAT) family BCJMU02_2308 PF01593 Flavin containing amine oxidoreductase BCJMU02_2311 PF08241 Methyltransferase domain BCJMU02_2312 PF13302 Acetyltransferase (GNAT) domain BCJMU02_2314 PF00313 'Cold-shock' DNA-binding domain BCJMU02_2319 PF03466 LysR substrate binding domain BCJMU02_2319 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BCJMU02_2320 PF02774 Semialdehyde dehydrogenase, dimerisation domain BCJMU02_2320 PF01118 Semialdehyde dehydrogenase, NAD binding domain BCJMU02_2323 PF03466 LysR substrate binding domain BCJMU02_2323 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BCJMU02_2324 PF03473 MOSC domain BCJMU02_2324 PF03475 3-alpha domain BCJMU02_2328 PF00005 ABC transporter BCJMU02_2328 PF00664 ABC transporter transmembrane region BCJMU02_2329 PF00005 ABC transporter BCJMU02_2329 PF00664 ABC transporter transmembrane region BCJMU02_2331 PF01810 LysE type translocator BCJMU02_2332 PF07883 Cupin domain BCJMU02_2332 PF01381 Helix-turn-helix BCJMU02_2338 PF13291 ACT domain BCJMU02_2338 PF02824 TGS domain BCJMU02_2338 PF04607 Region found in RelA / SpoT proteins BCJMU02_2340 PF00890 FAD binding domain BCJMU02_2341 PF08281 Sigma-70, region 4 BCJMU02_2341 PF04542 Sigma-70 region 2 BCJMU02_2341 PF12680 SnoaL-like domain BCJMU02_2346 PF02638 Glycosyl hydrolase-like 10 BCJMU02_2348 PF02378 Phosphotransferase system, EIIC BCJMU02_2350 PF03702 Anhydro-N-acetylmuramic acid kinase BCJMU02_2351 PF01869 BadF/BadG/BcrA/BcrD ATPase family BCJMU02_2352 PF02660 Glycerol-3-phosphate acyltransferase BCJMU02_2353 PF00266 Aminotransferase class-V BCJMU02_2354 PF00291 Pyridoxal-phosphate dependent enzyme BCJMU02_2360 PF00753 Metallo-beta-lactamase superfamily BCJMU02_2363 PF00271 Helicase conserved C-terminal domain BCJMU02_2363 PF00270 DEAD/DEAH box helicase BCJMU02_2367 PF17932 Tetracyclin repressor-like, C-terminal domain BCJMU02_2367 PF00440 Bacterial regulatory proteins, tetR family BCJMU02_2371 PF12704 MacB-like periplasmic core domain BCJMU02_2371 PF02687 FtsX-like permease family BCJMU02_2371 PF00005 ABC transporter BCJMU02_2372 PF09313 Domain of unknown function (DUF1971) BCJMU02_2372 PF03848 Tellurite resistance protein TehB BCJMU02_2374 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BCJMU02_2374 PF00205 Thiamine pyrophosphate enzyme, central domain BCJMU02_2374 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BCJMU02_2375 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BCJMU02_2375 PF00205 Thiamine pyrophosphate enzyme, central domain BCJMU02_2375 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BCJMU02_2376 PF00589 Phage integrase family BCJMU02_2376 PF14659 Phage integrase, N-terminal SAM-like domain BCJMU02_2393 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BCJMU02_2393 PF00205 Thiamine pyrophosphate enzyme, central domain BCJMU02_2393 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BCJMU02_2394 PF12802 MarR family BCJMU02_2395 PF00300 Histidine phosphatase superfamily (branch 1) BCJMU02_2396 PF14171 Toxin SpoIISA, type II toxin-antitoxin system BCJMU02_2402 PF01546 Peptidase family M20/M25/M40 BCJMU02_2402 PF07687 Peptidase dimerisation domain BCJMU02_2405 PF04542 Sigma-70 region 2 BCJMU02_2405 PF08281 Sigma-70, region 4 BCJMU02_2407 PF00905 Penicillin binding protein transpeptidase domain BCJMU02_2407 PF03717 Penicillin-binding Protein dimerisation domain BCJMU02_2408 PF00665 Integrase core domain BCJMU02_2408 PF02796 Helix-turn-helix domain of resolvase BCJMU02_2409 PF01695 IstB-like ATP binding protein BCJMU02_2410 PF00905 Penicillin binding protein transpeptidase domain BCJMU02_2410 PF03717 Penicillin-binding Protein dimerisation domain BCJMU02_2413 PF00149 Calcineurin-like phosphoesterase BCJMU02_2414 PF07282 Putative transposase DNA-binding domain BCJMU02_2414 PF01385 Probable transposase BCJMU02_2414 PF12323 Helix-turn-helix domain BCJMU02_2418 PF02770 Acyl-CoA dehydrogenase, middle domain BCJMU02_2418 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BCJMU02_2418 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BCJMU02_2419 PF02785 Biotin carboxylase C-terminal domain BCJMU02_2419 PF00289 Biotin carboxylase, N-terminal domain BCJMU02_2419 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BCJMU02_2420 PF00364 Biotin-requiring enzyme BCJMU02_2421 PF00682 HMGL-like BCJMU02_2422 PF00378 Enoyl-CoA hydratase/isomerase BCJMU02_2423 PF01039 Carboxyl transferase domain BCJMU02_2424 PF13193 AMP-binding enzyme C-terminal domain BCJMU02_2424 PF16177 Acetyl-coenzyme A synthetase N-terminus BCJMU02_2424 PF00501 AMP-binding enzyme BCJMU02_2426 PF00583 Acetyltransferase (GNAT) family BCJMU02_2427 PF00485 Phosphoribulokinase / Uridine kinase family BCJMU02_2429 PF05163 DinB family BCJMU02_2430 PF07943 Penicillin-binding protein 5, C-terminal domain BCJMU02_2430 PF00768 D-alanyl-D-alanine carboxypeptidase BCJMU02_2431 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCJMU02_2431 PF00512 His Kinase A (phospho-acceptor) domain BCJMU02_2432 PF00486 Transcriptional regulatory protein, C terminal BCJMU02_2432 PF00072 Response regulator receiver domain BCJMU02_2433 PF01966 HD domain BCJMU02_2434 PF13021 Domain of unknown function (DUF3885) BCJMU02_2435 PF01048 Phosphorylase superfamily BCJMU02_2439 PF01447 Thermolysin metallopeptidase, catalytic domain BCJMU02_2439 PF07504 Fungalysin/Thermolysin Propeptide Motif BCJMU02_2439 PF02868 Thermolysin metallopeptidase, alpha-helical domain BCJMU02_2439 PF03413 Peptidase propeptide and YPEB domain BCJMU02_2443 PF17755 UvrA DNA-binding domain BCJMU02_2443 PF17760 UvrA interaction domain BCJMU02_2443 PF17755 UvrA DNA-binding domain BCJMU02_2443 PF17760 UvrA interaction domain BCJMU02_2447 PF00376 MerR family regulatory protein BCJMU02_2447 PF09278 MerR, DNA binding BCJMU02_2448 PF07690 Major Facilitator Superfamily BCJMU02_2450 PF13847 Methyltransferase domain BCJMU02_2453 PF01636 Phosphotransferase enzyme family BCJMU02_2454 PF12833 Helix-turn-helix domain BCJMU02_2457 PF00392 Bacterial regulatory proteins, gntR family BCJMU02_2457 PF00155 Aminotransferase class I and II BCJMU02_2461 PF00107 Zinc-binding dehydrogenase BCJMU02_2461 PF08240 Alcohol dehydrogenase GroES-like domain BCJMU02_2465 PF08450 SMP-30/Gluconolactonase/LRE-like region BCJMU02_2467 PF01921 tRNA synthetases class I (K) BCJMU02_2468 PF07486 Cell Wall Hydrolase BCJMU02_2470 PF00072 Response regulator receiver domain BCJMU02_2470 PF00486 Transcriptional regulatory protein, C terminal BCJMU02_2471 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCJMU02_2473 PF12848 ABC transporter BCJMU02_2473 PF00005 ABC transporter BCJMU02_2475 PF00005 ABC transporter BCJMU02_2476 PF02687 FtsX-like permease family BCJMU02_2480 PF03447 Homoserine dehydrogenase, NAD binding domain BCJMU02_2480 PF00742 Homoserine dehydrogenase BCJMU02_2480 PF01842 ACT domain BCJMU02_2481 PF00392 Bacterial regulatory proteins, gntR family BCJMU02_2481 PF00155 Aminotransferase class I and II BCJMU02_2482 PF07478 D-ala D-ala ligase C-terminus BCJMU02_2482 PF01820 D-ala D-ala ligase N-terminus BCJMU02_2483 PF03070 TENA/THI-4/PQQC family BCJMU02_2502 PF00067 Cytochrome P450 BCJMU02_2505 PF00132 Bacterial transferase hexapeptide (six repeats) BCJMU02_2506 PF07561 Domain of Unknown Function (DUF1540) BCJMU02_2508 PF00067 Cytochrome P450 BCJMU02_2511 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCJMU02_2511 PF00512 His Kinase A (phospho-acceptor) domain BCJMU02_2511 PF00989 PAS fold BCJMU02_2511 PF13188 PAS domain BCJMU02_2511 PF13426 PAS domain BCJMU02_2512 PF00905 Penicillin binding protein transpeptidase domain BCJMU02_2512 PF03717 Penicillin-binding Protein dimerisation domain BCJMU02_2513 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase BCJMU02_2514 PF01177 Asp/Glu/Hydantoin racemase BCJMU02_2515 PF07155 ECF-type riboflavin transporter, S component BCJMU02_2516 PF00005 ABC transporter BCJMU02_2516 PF12558 ATP-binding cassette cobalt transporter BCJMU02_2518 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCJMU02_2518 PF00512 His Kinase A (phospho-acceptor) domain BCJMU02_2521 PF04229 GrpB protein BCJMU02_2522 PF00107 Zinc-binding dehydrogenase BCJMU02_2522 PF08240 Alcohol dehydrogenase GroES-like domain BCJMU02_2523 PF01569 PAP2 superfamily BCJMU02_2524 PF00905 Penicillin binding protein transpeptidase domain BCJMU02_2524 PF03717 Penicillin-binding Protein dimerisation domain BCJMU02_2524 PF03793 PASTA domain BCJMU02_2525 PF08361 MAATS-type transcriptional repressor, C-terminal region BCJMU02_2525 PF00440 Bacterial regulatory proteins, tetR family BCJMU02_2528 PF11954 Domain of unknown function (DUF3471) BCJMU02_2528 PF00144 Beta-lactamase BCJMU02_2533 PF00239 Resolvase, N terminal domain BCJMU02_2533 PF02796 Helix-turn-helix domain of resolvase BCJMU02_2535 PF01965 DJ-1/PfpI family BCJMU02_2536 PF00144 Beta-lactamase BCJMU02_2538 PF07690 Major Facilitator Superfamily BCJMU02_2542 PF01609 Transposase DDE domain BCJMU02_2543 PF01609 Transposase DDE domain BCJMU02_2544 PF03009 Glycerophosphoryl diester phosphodiesterase family BCJMU02_2547 PF00144 Beta-lactamase BCJMU02_2548 PF00392 Bacterial regulatory proteins, gntR family BCJMU02_2548 PF00155 Aminotransferase class I and II BCJMU02_2549 PF00892 EamA-like transporter family BCJMU02_2555 PF00144 Beta-lactamase BCJMU02_2557 PF07690 Major Facilitator Superfamily BCJMU02_2558 PF00293 NUDIX domain BCJMU02_2558 PF09297 NADH pyrophosphatase zinc ribbon domain BCJMU02_2559 PF00712 DNA polymerase III beta subunit, N-terminal domain BCJMU02_2559 PF02767 DNA polymerase III beta subunit, central domain BCJMU02_2559 PF02768 DNA polymerase III beta subunit, C-terminal domain BCJMU02_2560 PF00293 NUDIX domain BCJMU02_2562 PF12706 Beta-lactamase superfamily domain BCJMU02_2565 PF00300 Histidine phosphatase superfamily (branch 1) BCJMU02_2567 PF09234 Domain of unknown function (DUF1963) BCJMU02_2572 PF01734 Patatin-like phospholipase BCJMU02_2573 PF08000 Bacterial PH domain BCJMU02_2576 PF12867 DinB superfamily BCJMU02_2579 PF02673 Bacitracin resistance protein BacA BCJMU02_2581 PF01541 GIY-YIG catalytic domain BCJMU02_2589 PF01266 FAD dependent oxidoreductase BCJMU02_2594 PF13419 Haloacid dehalogenase-like hydrolase BCJMU02_2597 PF01569 PAP2 superfamily BCJMU02_2598 PF03714 Bacterial pullanase-associated domain BCJMU02_2598 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BCJMU02_2598 PF00128 Alpha amylase, catalytic domain BCJMU02_2599 PF07504 Fungalysin/Thermolysin Propeptide Motif BCJMU02_2599 PF02868 Thermolysin metallopeptidase, alpha-helical domain BCJMU02_2599 PF01447 Thermolysin metallopeptidase, catalytic domain BCJMU02_2599 PF03413 Peptidase propeptide and YPEB domain BCJMU02_2603 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BCJMU02_2604 PF00344 SecY translocase BCJMU02_2605 PF08299 Bacterial dnaA protein helix-turn-helix BCJMU02_2605 PF11638 DnaA N-terminal domain BCJMU02_2605 PF00308 Bacterial dnaA protein BCJMU02_2606 PF00892 EamA-like transporter family BCJMU02_2607 PF00155 Aminotransferase class I and II BCJMU02_2607 PF00392 Bacterial regulatory proteins, gntR family BCJMU02_2608 PF00561 alpha/beta hydrolase fold BCJMU02_2613 PF06081 Aromatic acid exporter family member 1 BCJMU02_2616 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) BCJMU02_2617 PF03413 Peptidase propeptide and YPEB domain BCJMU02_2617 PF14620 YpeB sporulation BCJMU02_2618 PF01471 Putative peptidoglycan binding domain BCJMU02_2618 PF07486 Cell Wall Hydrolase BCJMU02_2621 PF03301 Tryptophan 2,3-dioxygenase BCJMU02_2622 PF04199 Putative cyclase BCJMU02_2623 PF00266 Aminotransferase class-V BCJMU02_2624 PF08359 YsiA-like protein, C-terminal region BCJMU02_2624 PF00440 Bacterial regulatory proteins, tetR family BCJMU02_2625 PF00293 NUDIX domain BCJMU02_2625 PF13344 Haloacid dehalogenase-like hydrolase BCJMU02_2629 PF00158 Sigma-54 interaction domain BCJMU02_2629 PF02954 Bacterial regulatory protein, Fis family BCJMU02_2629 PF01590 GAF domain BCJMU02_2632 PF13302 Acetyltransferase (GNAT) domain BCJMU02_2633 PF08220 DeoR-like helix-turn-helix domain BCJMU02_2633 PF00455 DeoR C terminal sensor domain BCJMU02_2636 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BCJMU02_2636 PF07992 Pyridine nucleotide-disulphide oxidoreductase BCJMU02_2636 PF00403 Heavy-metal-associated domain BCJMU02_2637 PF02082 Transcriptional regulator BCJMU02_2640 PF07992 Pyridine nucleotide-disulphide oxidoreductase BCJMU02_2640 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BCJMU02_2641 PF00364 Biotin-requiring enzyme BCJMU02_2641 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BCJMU02_2641 PF02817 e3 binding domain BCJMU02_2642 PF02779 Transketolase, pyrimidine binding domain BCJMU02_2642 PF02780 Transketolase, C-terminal domain BCJMU02_2643 PF00676 Dehydrogenase E1 component BCJMU02_2645 PF00106 short chain dehydrogenase BCJMU02_2646 PF04229 GrpB protein BCJMU02_2646 PF13673 Acetyltransferase (GNAT) domain BCJMU02_2647 PF00485 Phosphoribulokinase / Uridine kinase family BCJMU02_2650 PF00293 NUDIX domain BCJMU02_2654 PF00528 Binding-protein-dependent transport system inner membrane component BCJMU02_2655 PF00005 ABC transporter BCJMU02_2655 PF00571 CBS domain BCJMU02_2656 PF04069 Substrate binding domain of ABC-type glycine betaine transport system BCJMU02_2657 PF00574 Clp protease BCJMU02_2660 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) BCJMU02_2661 PF13673 Acetyltransferase (GNAT) domain BCJMU02_2662 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading BCJMU02_2662 PF18416 N-acetylglucosamine binding protein domain 2 BCJMU02_2663 PF01202 Shikimate kinase BCJMU02_2664 PF10990 Protein of unknown function (DUF2809) BCJMU02_2665 PF08241 Methyltransferase domain BCJMU02_2666 PF04237 YjbR BCJMU02_2667 PF13673 Acetyltransferase (GNAT) domain BCJMU02_2668 PF03772 Competence protein BCJMU02_2668 PF00753 Metallo-beta-lactamase superfamily BCJMU02_2668 PF13567 Domain of unknown function (DUF4131) BCJMU02_2678 PF13538 UvrD-like helicase C-terminal domain BCJMU02_2682 PF09382 RQC domain BCJMU02_2682 PF16124 RecQ zinc-binding BCJMU02_2682 PF00570 HRDC domain BCJMU02_2682 PF00271 Helicase conserved C-terminal domain BCJMU02_2682 PF00270 DEAD/DEAH box helicase BCJMU02_2691 PF01368 DHH family BCJMU02_2691 PF02833 DHHA2 domain BCJMU02_2692 PF18416 N-acetylglucosamine binding protein domain 2 BCJMU02_2692 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading BCJMU02_2694 PF02627 Carboxymuconolactone decarboxylase family BCJMU02_2695 PF01235 Sodium:alanine symporter family BCJMU02_2696 PF00171 Aldehyde dehydrogenase family BCJMU02_2697 PF00701 Dihydrodipicolinate synthetase family BCJMU02_2698 PF05544 Proline racemase BCJMU02_2699 PF05544 Proline racemase BCJMU02_2700 PF01266 FAD dependent oxidoreductase BCJMU02_2701 PF02954 Bacterial regulatory protein, Fis family BCJMU02_2701 PF13188 PAS domain BCJMU02_2701 PF00158 Sigma-54 interaction domain BCJMU02_2702 PF04324 BFD-like [2Fe-2S] binding domain BCJMU02_2702 PF07992 Pyridine nucleotide-disulphide oxidoreductase BCJMU02_2704 PF04324 BFD-like [2Fe-2S] binding domain BCJMU02_2704 PF07992 Pyridine nucleotide-disulphide oxidoreductase BCJMU02_2707 PF08876 Domain of unknown function (DUF1836) BCJMU02_2708 PF09335 SNARE associated Golgi protein BCJMU02_2711 PF04914 DltD protein BCJMU02_2712 PF13673 Acetyltransferase (GNAT) domain BCJMU02_2712 PF13302 Acetyltransferase (GNAT) domain BCJMU02_2712 PF03352 Methyladenine glycosylase BCJMU02_2712 PF00117 Glutamine amidotransferase class-I BCJMU02_2712 PF00958 GMP synthase C terminal domain BCJMU02_2713 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BCJMU02_2714 PF00877 NlpC/P60 family BCJMU02_2714 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain BCJMU02_2715 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BCJMU02_2715 PF13378 Enolase C-terminal domain-like BCJMU02_2719 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BCJMU02_2723 PF02129 X-Pro dipeptidyl-peptidase (S15 family) BCJMU02_2723 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain BCJMU02_2724 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCJMU02_2724 PF00512 His Kinase A (phospho-acceptor) domain BCJMU02_2724 PF00989 PAS fold BCJMU02_2724 PF16736 Single Cache-like BCJMU02_2725 PF00486 Transcriptional regulatory protein, C terminal BCJMU02_2725 PF00072 Response regulator receiver domain BCJMU02_2729 PF01048 Phosphorylase superfamily BCJMU02_2730 PF03808 Glycosyl transferase WecB/TagA/CpsF family BCJMU02_2731 PF01432 Peptidase family M3 BCJMU02_2731 PF08439 Oligopeptidase F BCJMU02_2732 PF13520 Amino acid permease BCJMU02_2733 PF01037 Lrp/AsnC ligand binding domain BCJMU02_2734 PF02645 Uncharacterised protein, DegV family COG1307 BCJMU02_2735 PF07552 Spore Coat Protein X and V domain BCJMU02_2741 PF07690 Major Facilitator Superfamily BCJMU02_2743 PF04519 Polymer-forming cytoskeletal BCJMU02_2744 PF13171 Protein of unknown function (DUF4004) BCJMU02_2745 PF12793 Sugar transport-related sRNA regulator N-term BCJMU02_2745 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BCJMU02_2746 PF07690 Major Facilitator Superfamily BCJMU02_2750 PF04226 Transglycosylase associated protein BCJMU02_2751 PF01156 Inosine-uridine preferring nucleoside hydrolase BCJMU02_2754 PF08241 Methyltransferase domain BCJMU02_2759 PF00155 Aminotransferase class I and II BCJMU02_2760 PF07977 FabA-like domain BCJMU02_2761 PF03630 Fumble BCJMU02_2762 PF03630 Fumble BCJMU02_2766 PF00005 ABC transporter BCJMU02_2776 PF01594 AI-2E family transporter BCJMU02_2778 PF00296 Luciferase-like monooxygenase BCJMU02_2779 PF00528 Binding-protein-dependent transport system inner membrane component BCJMU02_2780 PF09084 NMT1/THI5 like BCJMU02_2781 PF00005 ABC transporter BCJMU02_2783 PF00293 NUDIX domain BCJMU02_2783 PF09297 NADH pyrophosphatase zinc ribbon domain BCJMU02_2787 PF02522 Aminoglycoside 3-N-acetyltransferase BCJMU02_2792 PF13536 Putative multidrug resistance efflux transporter BCJMU02_2793 PF12867 DinB superfamily BCJMU02_2799 PF01522 Polysaccharide deacetylase BCJMU02_2801 PF03741 Integral membrane protein TerC family BCJMU02_2802 PF00884 Sulfatase BCJMU02_2803 PF00005 ABC transporter BCJMU02_2803 PF12848 ABC transporter BCJMU02_2805 PF03176 MMPL family BCJMU02_2806 PF00440 Bacterial regulatory proteins, tetR family BCJMU02_2806 PF16295 Tetracyclin repressor-like, C-terminal domain BCJMU02_2808 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BCJMU02_2809 PF02153 Prephenate dehydrogenase BCJMU02_2809 PF01842 ACT domain BCJMU02_2810 PF00155 Aminotransferase class I and II BCJMU02_2811 PF01264 Chorismate synthase BCJMU02_2812 PF00793 DAHP synthetase I family BCJMU02_2812 PF01817 Chorismate mutase type II BCJMU02_2816 PF01636 Phosphotransferase enzyme family BCJMU02_2820 PF01476 LysM domain BCJMU02_2820 PF06725 3D domain BCJMU02_2823 PF00378 Enoyl-CoA hydratase/isomerase BCJMU02_2824 PF13193 AMP-binding enzyme C-terminal domain BCJMU02_2824 PF00501 AMP-binding enzyme BCJMU02_2825 PF00158 Sigma-54 interaction domain BCJMU02_2825 PF00989 PAS fold BCJMU02_2825 PF02954 Bacterial regulatory protein, Fis family BCJMU02_2828 PF06039 Malate:quinone oxidoreductase (Mqo) BCJMU02_2829 PF13407 Periplasmic binding protein domain BCJMU02_2830 PF02653 Branched-chain amino acid transport system / permease component BCJMU02_2831 PF02653 Branched-chain amino acid transport system / permease component BCJMU02_2832 PF00005 ABC transporter BCJMU02_2833 PF00325 Bacterial regulatory proteins, crp family BCJMU02_2833 PF04198 Putative sugar-binding domain BCJMU02_2834 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BCJMU02_2834 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BCJMU02_2836 PF01791 DeoC/LacD family aldolase BCJMU02_2842 PF03992 Antibiotic biosynthesis monooxygenase BCJMU02_2846 PF07662 Na+ dependent nucleoside transporter C-terminus BCJMU02_2846 PF01773 Na+ dependent nucleoside transporter N-terminus BCJMU02_2847 PF00171 Aldehyde dehydrogenase family BCJMU02_2848 PF00696 Amino acid kinase family BCJMU02_2848 PF01472 PUA domain BCJMU02_2849 PF14748 Pyrroline-5-carboxylate reductase dimerisation BCJMU02_2849 PF03807 NADP oxidoreductase coenzyme F420-dependent BCJMU02_2850 PF01546 Peptidase family M20/M25/M40 BCJMU02_2851 PF09339 IclR helix-turn-helix domain BCJMU02_2851 PF01614 Bacterial transcriptional regulator BCJMU02_2852 PF00324 Amino acid permease BCJMU02_2855 PF00324 Amino acid permease BCJMU02_2856 PF01139 tRNA-splicing ligase RtcB BCJMU02_2857 PF00487 Fatty acid desaturase BCJMU02_2858 PF00245 Alkaline phosphatase BCJMU02_2859 PF11188 Protein of unknown function (DUF2975) BCJMU02_2860 PF13443 Cro/C1-type HTH DNA-binding domain BCJMU02_2863 PF10086 YhfC intramembrane metalloprotease BCJMU02_2865 PF00072 Response regulator receiver domain BCJMU02_2865 PF04397 LytTr DNA-binding domain BCJMU02_2870 PF13302 Acetyltransferase (GNAT) domain BCJMU02_2871 PF12681 Glyoxalase-like domain BCJMU02_2875 PF17863 AAA lid domain BCJMU02_2875 PF07726 ATPase family associated with various cellular activities (AAA) BCJMU02_2878 PF07690 Major Facilitator Superfamily BCJMU02_2883 PF00535 Glycosyl transferase family 2 BCJMU02_2885 PF00535 Glycosyl transferase family 2 BCJMU02_2887 PF00202 Aminotransferase class-III BCJMU02_2888 PF06628 Catalase-related immune-responsive BCJMU02_2888 PF00199 Catalase BCJMU02_2890 PF13382 Adenine deaminase C-terminal domain BCJMU02_2890 PF01979 Amidohydrolase family BCJMU02_2891 PF00144 Beta-lactamase BCJMU02_2896 PF00881 Nitroreductase family BCJMU02_2897 PF01047 MarR family BCJMU02_2899 PF14492 Elongation Factor G, domain II BCJMU02_2899 PF00009 Elongation factor Tu GTP binding domain BCJMU02_2899 PF00679 Elongation factor G C-terminus BCJMU02_2899 PF03764 Elongation factor G, domain IV BCJMU02_2901 PF00293 NUDIX domain BCJMU02_2904 PF00005 ABC transporter BCJMU02_2905 PF00392 Bacterial regulatory proteins, gntR family BCJMU02_2908 PF02687 FtsX-like permease family BCJMU02_2908 PF00005 ABC transporter BCJMU02_2908 PF12704 MacB-like periplasmic core domain BCJMU02_2914 PF12833 Helix-turn-helix domain BCJMU02_2915 PF00583 Acetyltransferase (GNAT) family BCJMU02_2918 PF00892 EamA-like transporter family BCJMU02_2919 PF00392 Bacterial regulatory proteins, gntR family BCJMU02_2919 PF00155 Aminotransferase class I and II BCJMU02_2920 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 BCJMU02_2921 PF13031 Protein of unknown function (DUF3892) BCJMU02_2927 PF01925 Sulfite exporter TauE/SafE BCJMU02_2928 PF13302 Acetyltransferase (GNAT) domain BCJMU02_2929 PF00324 Amino acid permease BCJMU02_2931 PF08713 DNA alkylation repair enzyme BCJMU02_2932 PF10898 Protein of unknown function (DUF2716) BCJMU02_2934 PF00293 NUDIX domain BCJMU02_2935 PF04989 Cephalosporin hydroxylase BCJMU02_2936 PF10502 Signal peptidase, peptidase S26 BCJMU02_2937 PF00905 Penicillin binding protein transpeptidase domain BCJMU02_2937 PF03717 Penicillin-binding Protein dimerisation domain BCJMU02_2939 PF02146 Sir2 family BCJMU02_2940 PF01470 Pyroglutamyl peptidase BCJMU02_2943 PF03746 LamB/YcsF family BCJMU02_2944 PF02626 Carboxyltransferase domain, subdomain A and B BCJMU02_2945 PF02682 Carboxyltransferase domain, subdomain C and D BCJMU02_2946 PF09339 IclR helix-turn-helix domain BCJMU02_2946 PF01614 Bacterial transcriptional regulator BCJMU02_2947 PF10502 Signal peptidase, peptidase S26 BCJMU02_2948 PF03932 CutC family BCJMU02_2949 PF07454 Stage II sporulation protein P (SpoIIP) BCJMU02_2952 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BCJMU02_2952 PF02770 Acyl-CoA dehydrogenase, middle domain BCJMU02_2952 PF08028 Acyl-CoA dehydrogenase, C-terminal domain BCJMU02_2955 PF07670 Nucleoside recognition BCJMU02_2959 PF00440 Bacterial regulatory proteins, tetR family BCJMU02_2960 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain BCJMU02_2960 PF00391 PEP-utilising enzyme, mobile domain BCJMU02_2962 PF00753 Metallo-beta-lactamase superfamily BCJMU02_2966 PF07875 Coat F domain BCJMU02_2967 PF08892 YqcI/YcgG family BCJMU02_2968 PF01810 LysE type translocator BCJMU02_2969 PF00324 Amino acid permease BCJMU02_2971 PF00269 Small, acid-soluble spore proteins, alpha/beta type BCJMU02_2972 PF10710 Protein of unknown function (DUF2512) BCJMU02_2973 PF11553 Protein of unknown function (DUF3231) BCJMU02_2974 PF00269 Small, acid-soluble spore proteins, alpha/beta type BCJMU02_2975 PF00107 Zinc-binding dehydrogenase BCJMU02_2975 PF08240 Alcohol dehydrogenase GroES-like domain BCJMU02_2975 PF13823 Alcohol dehydrogenase GroES-associated BCJMU02_2978 PF02899 Phage integrase, N-terminal SAM-like domain BCJMU02_2978 PF00589 Phage integrase family BCJMU02_2979 PF00589 Phage integrase family BCJMU02_2979 PF02899 Phage integrase, N-terminal SAM-like domain BCJMU02_2984 PF11798 IMS family HHH motif BCJMU02_2984 PF00817 impB/mucB/samB family BCJMU02_2984 PF11799 impB/mucB/samB family C-terminal domain BCJMU02_2986 PF12161 HsdM N-terminal domain BCJMU02_2986 PF02384 N-6 DNA Methylase BCJMU02_2988 PF12008 Type I restriction and modification enzyme - subunit R C terminal BCJMU02_2988 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) BCJMU02_2988 PF18766 SWI2/SNF2 ATPase BCJMU02_2993 PF00589 Phage integrase family BCJMU02_2993 PF02899 Phage integrase, N-terminal SAM-like domain BCJMU02_2994 PF00817 impB/mucB/samB family BCJMU02_2996 PF00144 Beta-lactamase BCJMU02_2997 PF00149 Calcineurin-like phosphoesterase BCJMU02_2997 PF02872 5'-nucleotidase, C-terminal domain BCJMU02_2997 PF17936 Bacterial Ig domain BCJMU02_2998 PF01348 Type II intron maturase BCJMU02_2998 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) BCJMU02_3000 PF03992 Antibiotic biosynthesis monooxygenase BCJMU02_3002 PF01544 CorA-like Mg2+ transporter protein BCJMU02_3005 PF11181 Heat induced stress protein YflT BCJMU02_3008 PF03073 TspO/MBR family BCJMU02_3009 PF03441 FAD binding domain of DNA photolyase BCJMU02_3009 PF00875 DNA photolyase BCJMU02_3011 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) BCJMU02_3012 PF00361 Proton-conducting membrane transporter BCJMU02_3012 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BCJMU02_3013 PF10057 Uncharacterized conserved protein (DUF2294) BCJMU02_3016 PF17863 AAA lid domain BCJMU02_3016 PF07726 ATPase family associated with various cellular activities (AAA) BCJMU02_3017 PF01040 UbiA prenyltransferase family BCJMU02_3018 PF00561 alpha/beta hydrolase fold BCJMU02_3019 PF12996 DUF based on E. rectale Gene description (DUF3880) BCJMU02_3020 PF00005 ABC transporter BCJMU02_3021 PF02687 FtsX-like permease family BCJMU02_3025 PF00072 Response regulator receiver domain BCJMU02_3025 PF04397 LytTr DNA-binding domain BCJMU02_3026 PF01297 Zinc-uptake complex component A periplasmic BCJMU02_3027 PF00950 ABC 3 transport family BCJMU02_3028 PF00005 ABC transporter BCJMU02_3032 PF01451 Low molecular weight phosphotyrosine protein phosphatase BCJMU02_3033 PF01758 Sodium Bile acid symporter family BCJMU02_3034 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BCJMU02_3035 PF01022 Bacterial regulatory protein, arsR family BCJMU02_3038 PF00012 Hsp70 protein BCJMU02_3039 PF07690 Major Facilitator Superfamily BCJMU02_3042 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BCJMU02_3044 PF00144 Beta-lactamase BCJMU02_3049 PF12802 MarR family BCJMU02_3050 PF00667 FAD binding domain BCJMU02_3050 PF00067 Cytochrome P450 BCJMU02_3050 PF00175 Oxidoreductase NAD-binding domain BCJMU02_3050 PF00258 Flavodoxin BCJMU02_3051 PF07690 Major Facilitator Superfamily BCJMU02_3056 PF00072 Response regulator receiver domain BCJMU02_3056 PF00486 Transcriptional regulatory protein, C terminal BCJMU02_3057 PF00512 His Kinase A (phospho-acceptor) domain BCJMU02_3057 PF00672 HAMP domain BCJMU02_3057 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCJMU02_3063 PF00291 Pyridoxal-phosphate dependent enzyme BCJMU02_3065 PF00144 Beta-lactamase BCJMU02_3068 PF00753 Metallo-beta-lactamase superfamily BCJMU02_3069 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family BCJMU02_3071 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BCJMU02_3071 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BCJMU02_3074 PF02073 Thermophilic metalloprotease (M29) BCJMU02_3076 PF13411 MerR HTH family regulatory protein BCJMU02_3077 PF04072 Leucine carboxyl methyltransferase BCJMU02_3080 PF00005 ABC transporter BCJMU02_3081 PF02687 FtsX-like permease family BCJMU02_3084 PF00512 His Kinase A (phospho-acceptor) domain BCJMU02_3084 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCJMU02_3084 PF00672 HAMP domain BCJMU02_3085 PF00072 Response regulator receiver domain BCJMU02_3085 PF00486 Transcriptional regulatory protein, C terminal BCJMU02_3088 PF01047 MarR family BCJMU02_3089 PF00583 Acetyltransferase (GNAT) family BCJMU02_3090 PF04299 Putative FMN-binding domain BCJMU02_3091 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BCJMU02_3091 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BCJMU02_3092 PF07690 Major Facilitator Superfamily BCJMU02_3093 PF02589 LUD domain BCJMU02_3094 PF02589 LUD domain BCJMU02_3094 PF11870 Domain of unknown function (DUF3390) BCJMU02_3094 PF13183 4Fe-4S dicluster domain BCJMU02_3095 PF02754 Cysteine-rich domain BCJMU02_3096 PF03466 LysR substrate binding domain BCJMU02_3096 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BCJMU02_3099 PF02016 LD-carboxypeptidase N-terminal domain BCJMU02_3099 PF17676 LD-carboxypeptidase C-terminal domain BCJMU02_3102 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BCJMU02_3102 PF01842 ACT domain BCJMU02_3102 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BCJMU02_3103 PF00266 Aminotransferase class-V BCJMU02_3107 PF04542 Sigma-70 region 2 BCJMU02_3107 PF08281 Sigma-70, region 4 BCJMU02_3110 PF07883 Cupin domain BCJMU02_3111 PF01497 Periplasmic binding protein BCJMU02_3111 PF12833 Helix-turn-helix domain BCJMU02_3114 PF04740 LXG domain of WXG superfamily BCJMU02_3114 PF14436 Bacterial EndoU nuclease BCJMU02_3115 PF01804 Penicillin amidase BCJMU02_3117 PF01471 Putative peptidoglycan binding domain BCJMU02_3117 PF01510 N-acetylmuramoyl-L-alanine amidase BCJMU02_3117 PF01476 LysM domain BCJMU02_3124 PF14044 NETI protein BCJMU02_3125 PF07690 Major Facilitator Superfamily BCJMU02_3126 PF12697 Alpha/beta hydrolase family BCJMU02_3127 PF01047 MarR family BCJMU02_3128 PF07690 Major Facilitator Superfamily BCJMU02_3131 PF12679 ABC-2 family transporter protein BCJMU02_3132 PF13732 Domain of unknown function (DUF4162) BCJMU02_3132 PF00005 ABC transporter BCJMU02_3133 PF13396 Phospholipase_D-nuclease N-terminal BCJMU02_3135 PF17314 Family of unknown function (DUF5360) BCJMU02_3136 PF00893 Small Multidrug Resistance protein BCJMU02_3137 PF00440 Bacterial regulatory proteins, tetR family BCJMU02_3139 PF01289 Thiol-activated cytolysin BCJMU02_3139 PF17440 Thiol-activated cytolysin beta sandwich domain BCJMU02_3141 PF02667 Short chain fatty acid transporter BCJMU02_3143 PF02525 Flavodoxin-like fold BCJMU02_3147 PF14256 YwiC-like protein BCJMU02_3149 PF00005 ABC transporter BCJMU02_3150 PF02361 Cobalt transport protein BCJMU02_3153 PF03737 Aldolase/RraA BCJMU02_3154 PF03606 C4-dicarboxylate anaerobic carrier BCJMU02_3155 PF04231 Endonuclease I BCJMU02_3156 PF04073 Aminoacyl-tRNA editing domain BCJMU02_3157 PF00144 Beta-lactamase BCJMU02_3158 PF00072 Response regulator receiver domain BCJMU02_3158 PF00196 Bacterial regulatory proteins, luxR family BCJMU02_3159 PF13393 Histidyl-tRNA synthetase BCJMU02_3159 PF03129 Anticodon binding domain BCJMU02_3162 PF01638 HxlR-like helix-turn-helix BCJMU02_3163 PF00881 Nitroreductase family BCJMU02_3165 PF02887 Pyruvate kinase, alpha/beta domain BCJMU02_3165 PF00391 PEP-utilising enzyme, mobile domain BCJMU02_3165 PF00224 Pyruvate kinase, barrel domain BCJMU02_3171 PF00005 ABC transporter BCJMU02_3176 PF13419 Haloacid dehalogenase-like hydrolase BCJMU02_3177 PF07282 Putative transposase DNA-binding domain BCJMU02_3177 PF01385 Probable transposase BCJMU02_3177 PF12323 Helix-turn-helix domain BCJMU02_3181 PF13350 Tyrosine phosphatase family BCJMU02_3185 PF13344 Haloacid dehalogenase-like hydrolase BCJMU02_3185 PF00293 NUDIX domain BCJMU02_3186 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BCJMU02_3187 PF00480 ROK family BCJMU02_3188 PF14602 Hexapeptide repeat of succinyl-transferase BCJMU02_3188 PF12464 Maltose acetyltransferase BCJMU02_3189 PF01594 AI-2E family transporter BCJMU02_3193 PF08241 Methyltransferase domain BCJMU02_3195 PF07690 Major Facilitator Superfamily BCJMU02_3199 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BCJMU02_3201 PF01595 Cyclin M transmembrane N-terminal domain BCJMU02_3201 PF03471 Transporter associated domain BCJMU02_3201 PF00571 CBS domain BCJMU02_3202 PF13411 MerR HTH family regulatory protein BCJMU02_3203 PF00892 EamA-like transporter family BCJMU02_3204 PF00805 Pentapeptide repeats (8 copies) BCJMU02_3205 PF06906 Protein of unknown function (DUF1272) BCJMU02_3206 PF10282 Lactonase, 7-bladed beta-propeller BCJMU02_3207 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BCJMU02_3207 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BCJMU02_3208 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BCJMU02_3208 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BCJMU02_3209 PF02447 GntP family permease BCJMU02_3210 PF00923 Transaldolase/Fructose-6-phosphate aldolase BCJMU02_3211 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BCJMU02_3211 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain BCJMU02_3212 PF02780 Transketolase, C-terminal domain BCJMU02_3212 PF02779 Transketolase, pyrimidine binding domain BCJMU02_3212 PF00456 Transketolase, thiamine diphosphate binding domain BCJMU02_3213 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain BCJMU02_3213 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain BCJMU02_3216 PF08659 KR domain BCJMU02_3216 PF00550 Phosphopantetheine attachment site BCJMU02_3216 PF14765 Polyketide synthase dehydratase BCJMU02_3216 PF00109 Beta-ketoacyl synthase, N-terminal domain BCJMU02_3216 PF00698 Acyl transferase domain BCJMU02_3216 PF08240 Alcohol dehydrogenase GroES-like domain BCJMU02_3216 PF00107 Zinc-binding dehydrogenase BCJMU02_3216 PF02801 Beta-ketoacyl synthase, C-terminal domain BCJMU02_3216 PF16197 Ketoacyl-synthetase C-terminal extension BCJMU02_3218 PF03928 Haem-degrading BCJMU02_3225 PF03960 ArsC family BCJMU02_3227 PF07702 UTRA domain BCJMU02_3227 PF00392 Bacterial regulatory proteins, gntR family BCJMU02_3228 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BCJMU02_3228 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BCJMU02_3235 PF02567 Phenazine biosynthesis-like protein BCJMU02_3238 PF13193 AMP-binding enzyme C-terminal domain BCJMU02_3238 PF00501 AMP-binding enzyme BCJMU02_3239 PF02525 Flavodoxin-like fold BCJMU02_3240 PF01638 HxlR-like helix-turn-helix BCJMU02_3241 PF01022 Bacterial regulatory protein, arsR family BCJMU02_3242 PF01522 Polysaccharide deacetylase BCJMU02_3243 PF12791 Anti-sigma factor N-terminus BCJMU02_3244 PF04542 Sigma-70 region 2 BCJMU02_3245 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 BCJMU02_3245 PF00535 Glycosyl transferase family 2 BCJMU02_3246 PF02517 CPBP intramembrane metalloprotease BCJMU02_3247 PF00440 Bacterial regulatory proteins, tetR family BCJMU02_3251 PF05656 Protein of unknown function (DUF805) BCJMU02_3257 PF01061 ABC-2 type transporter BCJMU02_3258 PF00005 ABC transporter BCJMU02_3258 PF13732 Domain of unknown function (DUF4162) BCJMU02_3261 PF03063 Prismane/CO dehydrogenase family BCJMU02_3263 PF00753 Metallo-beta-lactamase superfamily BCJMU02_3264 PF01471 Putative peptidoglycan binding domain BCJMU02_3264 PF01183 Glycosyl hydrolases family 25 BCJMU02_3269 PF00144 Beta-lactamase BCJMU02_3279 PF08240 Alcohol dehydrogenase GroES-like domain BCJMU02_3279 PF00107 Zinc-binding dehydrogenase BCJMU02_3280 PF00324 Amino acid permease BCJMU02_3281 PF07690 Major Facilitator Superfamily BCJMU02_3287 PF02585 GlcNAc-PI de-N-acetylase BCJMU02_3288 PF08830 Protein of unknown function (DUF1806) BCJMU02_3289 PF03600 Citrate transporter BCJMU02_3292 PF01497 Periplasmic binding protein BCJMU02_3293 PF01032 FecCD transport family BCJMU02_3294 PF01032 FecCD transport family BCJMU02_3295 PF05675 Protein of unknown function (DUF817) BCJMU02_3296 PF02567 Phenazine biosynthesis-like protein BCJMU02_3300 PF03466 LysR substrate binding domain BCJMU02_3300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BCJMU02_3301 PF00107 Zinc-binding dehydrogenase BCJMU02_3301 PF08240 Alcohol dehydrogenase GroES-like domain BCJMU02_3304 PF00488 MutS domain V BCJMU02_3304 PF01713 Smr domain BCJMU02_3307 PF00128 Alpha amylase, catalytic domain BCJMU02_3307 PF09154 Domain of unknown function (DUF1939) BCJMU02_3308 PF00797 N-acetyltransferase BCJMU02_3309 PF08439 Oligopeptidase F BCJMU02_3309 PF01432 Peptidase family M3 BCJMU02_3310 PF00144 Beta-lactamase BCJMU02_3312 PF07690 Major Facilitator Superfamily BCJMU02_3313 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BCJMU02_3313 PF03466 LysR substrate binding domain BCJMU02_3316 PF03009 Glycerophosphoryl diester phosphodiesterase family BCJMU02_3321 PF01494 FAD binding domain BCJMU02_3322 PF01022 Bacterial regulatory protein, arsR family BCJMU02_3323 PF08240 Alcohol dehydrogenase GroES-like domain BCJMU02_3323 PF00107 Zinc-binding dehydrogenase BCJMU02_3324 PF02696 Uncharacterized ACR, YdiU/UPF0061 family BCJMU02_3325 PF18801 response regulator aspartate phosphatase H, N terminal BCJMU02_3327 PF04299 Putative FMN-binding domain BCJMU02_3328 PF04229 GrpB protein BCJMU02_3330 PF01758 Sodium Bile acid symporter family BCJMU02_3331 PF01565 FAD binding domain BCJMU02_3331 PF02913 FAD linked oxidases, C-terminal domain BCJMU02_3335 PF00132 Bacterial transferase hexapeptide (six repeats) BCJMU02_3336 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BCJMU02_3337 PF00535 Glycosyl transferase family 2 BCJMU02_3338 PF00378 Enoyl-CoA hydratase/isomerase BCJMU02_3339 PF08453 Peptidase family M9 N-terminal BCJMU02_3339 PF01752 Collagenase BCJMU02_3339 PF18496 Collagenase G catalytic helper subdomain BCJMU02_3340 PF02308 MgtC family BCJMU02_3343 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BCJMU02_3344 PF04294 VanW like protein BCJMU02_3346 PF13039 Protein of unknown function (DUF3900) BCJMU02_3346 PF13037 Domain of unknown function (DUF3898) BCJMU02_3350 PF00313 'Cold-shock' DNA-binding domain BCJMU02_3352 PF00258 Flavodoxin BCJMU02_3354 PF00293 NUDIX domain BCJMU02_3356 PF00132 Bacterial transferase hexapeptide (six repeats) BCJMU02_3359 PF13276 HTH-like domain BCJMU02_3359 PF00665 Integrase core domain BCJMU02_3359 PF13333 Integrase core domain BCJMU02_3360 PF13276 HTH-like domain BCJMU02_3360 PF00665 Integrase core domain BCJMU02_3360 PF13333 Integrase core domain BCJMU02_3364 PF01551 Peptidase family M23 BCJMU02_3364 PF04225 Opacity-associated protein A LysM-like domain BCJMU02_3366 PF01471 Putative peptidoglycan binding domain BCJMU02_3366 PF01183 Glycosyl hydrolases family 25 BCJMU02_3376 PF00106 short chain dehydrogenase BCJMU02_3378 PF14698 Argininosuccinate lyase C-terminal BCJMU02_3378 PF00206 Lyase BCJMU02_3380 PF01156 Inosine-uridine preferring nucleoside hydrolase BCJMU02_3381 PF00474 Sodium:solute symporter family BCJMU02_3383 PF00171 Aldehyde dehydrogenase family BCJMU02_3385 PF14151 YfhD-like protein BCJMU02_3386 PF13249 Squalene-hopene cyclase N-terminal domain BCJMU02_3386 PF13243 Squalene-hopene cyclase C-terminal domain BCJMU02_3387 PF02681 Divergent PAP2 family BCJMU02_3388 PF00892 EamA-like transporter family BCJMU02_3389 PF06961 Protein of unknown function (DUF1294) BCJMU02_3392 PF10609 NUBPL iron-transfer P-loop NTPase BCJMU02_3394 PF02391 MoaE protein BCJMU02_3395 PF00994 Probable molybdopterin binding domain BCJMU02_3395 PF03454 MoeA C-terminal region (domain IV) BCJMU02_3395 PF03453 MoeA N-terminal region (domain I and II) BCJMU02_3396 PF00899 ThiF family BCJMU02_3397 PF01226 Formate/nitrite transporter BCJMU02_3398 PF06463 Molybdenum Cofactor Synthesis C BCJMU02_3398 PF04055 Radical SAM superfamily BCJMU02_3399 PF02634 FdhD/NarQ family BCJMU02_3400 PF10057 Uncharacterized conserved protein (DUF2294) BCJMU02_3401 PF07849 Protein of unknown function (DUF1641) BCJMU02_3402 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BCJMU02_3402 PF00384 Molybdopterin oxidoreductase BCJMU02_3402 PF01568 Molydopterin dinucleotide binding domain BCJMU02_3402 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BCJMU02_3402 PF00037 4Fe-4S binding domain BCJMU02_3403 PF03323 Bacillus/Clostridium GerA spore germination protein BCJMU02_3411 PF08241 Methyltransferase domain BCJMU02_3412 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BCJMU02_3414 PF00665 Integrase core domain BCJMU02_3414 PF13276 HTH-like domain BCJMU02_3414 PF13333 Integrase core domain BCJMU02_3415 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BCJMU02_3416 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BCJMU02_3417 PF00375 Sodium:dicarboxylate symporter family BCJMU02_3418 PF03816 Cell envelope-related transcriptional attenuator domain BCJMU02_3420 PF08281 Sigma-70, region 4 BCJMU02_3420 PF04542 Sigma-70 region 2 BCJMU02_3424 PF13732 Domain of unknown function (DUF4162) BCJMU02_3424 PF00005 ABC transporter BCJMU02_3427 PF02899 Phage integrase, N-terminal SAM-like domain BCJMU02_3427 PF00589 Phage integrase family BCJMU02_3428 PF00589 Phage integrase family BCJMU02_3428 PF02899 Phage integrase, N-terminal SAM-like domain BCJMU02_3429 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BCJMU02_3429 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BCJMU02_3430 PF00521 DNA gyrase/topoisomerase IV, subunit A BCJMU02_3430 PF03989 DNA gyrase C-terminal domain, beta-propeller BCJMU02_3431 PF03989 DNA gyrase C-terminal domain, beta-propeller BCJMU02_3431 PF00521 DNA gyrase/topoisomerase IV, subunit A BCJMU02_3432 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCJMU02_3432 PF00986 DNA gyrase B subunit, carboxyl terminus BCJMU02_3432 PF01751 Toprim domain BCJMU02_3432 PF00204 DNA gyrase B BCJMU02_3433 PF13380 CoA binding domain BCJMU02_3434 PF13180 PDZ domain BCJMU02_3435 PF00072 Response regulator receiver domain BCJMU02_3435 PF00486 Transcriptional regulatory protein, C terminal BCJMU02_3436 PF04055 Radical SAM superfamily BCJMU02_3437 PF13597 Anaerobic ribonucleoside-triphosphate reductase BCJMU02_3437 PF03477 ATP cone domain BCJMU02_3438 PF02660 Glycerol-3-phosphate acyltransferase BCJMU02_3439 PF01521 Iron-sulphur cluster biosynthesis BCJMU02_3440 PF03061 Thioesterase superfamily BCJMU02_3441 PF01476 LysM domain BCJMU02_3441 PF00704 Glycosyl hydrolases family 18 BCJMU02_3443 PF08177 Small acid-soluble spore protein N family BCJMU02_3444 PF13040 Fur-regulated basic protein B BCJMU02_3445 PF02811 PHP domain BCJMU02_3445 PF07733 Bacterial DNA polymerase III alpha NTPase domain BCJMU02_3445 PF11490 DNA polymerase III polC-type N-terminus II BCJMU02_3445 PF01336 OB-fold nucleic acid binding domain BCJMU02_3445 PF14579 Helix-hairpin-helix motif BCJMU02_3445 PF00929 Exonuclease BCJMU02_3445 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BCJMU02_3446 PF00578 AhpC/TSA family BCJMU02_3448 PF00005 ABC transporter BCJMU02_3448 PF00664 ABC transporter transmembrane region BCJMU02_3449 PF00694 Aconitase C-terminal domain BCJMU02_3449 PF00330 Aconitase family (aconitate hydratase) BCJMU02_3451 PF01522 Polysaccharide deacetylase BCJMU02_3453 PF08179 Small acid-soluble spore protein P family BCJMU02_3455 PF07690 Major Facilitator Superfamily BCJMU02_3457 PF01411 tRNA synthetases class II (A) BCJMU02_3457 PF02272 DHHA1 domain BCJMU02_3457 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BCJMU02_3458 PF00293 NUDIX domain BCJMU02_3458 PF13344 Haloacid dehalogenase-like hydrolase BCJMU02_3459 PF02803 Thiolase, C-terminal domain BCJMU02_3459 PF00108 Thiolase, N-terminal domain BCJMU02_3460 PF00501 AMP-binding enzyme BCJMU02_3460 PF13193 AMP-binding enzyme C-terminal domain BCJMU02_3461 PF02632 BioY family BCJMU02_3462 PF00501 AMP-binding enzyme BCJMU02_3462 PF13193 AMP-binding enzyme C-terminal domain BCJMU02_3464 PF01381 Helix-turn-helix BCJMU02_3468 PF05532 CsbD-like BCJMU02_3474 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BCJMU02_3474 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BCJMU02_3476 PF00989 PAS fold BCJMU02_3476 PF13188 PAS domain BCJMU02_3476 PF13426 PAS domain BCJMU02_3476 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCJMU02_3476 PF00512 His Kinase A (phospho-acceptor) domain BCJMU02_3477 PF01738 Dienelactone hydrolase family BCJMU02_3478 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BCJMU02_3479 PF00474 Sodium:solute symporter family BCJMU02_3480 PF01645 Conserved region in glutamate synthase BCJMU02_3481 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BCJMU02_3482 PF02559 CarD-like/TRCF domain BCJMU02_3483 PF00491 Arginase family BCJMU02_3484 PF01979 Amidohydrolase family BCJMU02_3485 PF01175 Urocanase Rossmann-like domain BCJMU02_3485 PF17392 Urocanase C-terminal domain BCJMU02_3485 PF17391 Urocanase N-terminal domain BCJMU02_3486 PF00221 Aromatic amino acid lyase BCJMU02_3487 PF09021 HutP BCJMU02_3488 PF01209 ubiE/COQ5 methyltransferase family BCJMU02_3492 PF11084 Protein of unknown function (DUF2621) BCJMU02_3496 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) BCJMU02_3499 PF07301 Protein of unknown function (DUF1453) BCJMU02_3500 PF02683 Cytochrome C biogenesis protein transmembrane region BCJMU02_3502 PF07687 Peptidase dimerisation domain BCJMU02_3502 PF01546 Peptidase family M20/M25/M40 BCJMU02_3504 PF00005 ABC transporter BCJMU02_3506 PF03466 LysR substrate binding domain BCJMU02_3506 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BCJMU02_3507 PF03788 LrgA family BCJMU02_3508 PF04172 LrgB-like family BCJMU02_3509 PF13344 Haloacid dehalogenase-like hydrolase BCJMU02_3509 PF00293 NUDIX domain BCJMU02_3511 PF01925 Sulfite exporter TauE/SafE BCJMU02_3513 PF01510 N-acetylmuramoyl-L-alanine amidase BCJMU02_3513 PF01471 Putative peptidoglycan binding domain BCJMU02_3516 PF00005 ABC transporter BCJMU02_3516 PF00664 ABC transporter transmembrane region BCJMU02_3517 PF00005 ABC transporter BCJMU02_3517 PF00664 ABC transporter transmembrane region BCJMU02_3518 PF03672 Uncharacterised protein family (UPF0154) BCJMU02_3519 PF10747 Sporulation inhibitor of replication protein SirA BCJMU02_3520 PF02779 Transketolase, pyrimidine binding domain BCJMU02_3520 PF02780 Transketolase, C-terminal domain BCJMU02_3520 PF00456 Transketolase, thiamine diphosphate binding domain BCJMU02_3521 PF00528 Binding-protein-dependent transport system inner membrane component BCJMU02_3522 PF00528 Binding-protein-dependent transport system inner membrane component BCJMU02_3523 PF00005 ABC transporter BCJMU02_3525 PF02872 5'-nucleotidase, C-terminal domain BCJMU02_3525 PF00149 Calcineurin-like phosphoesterase BCJMU02_3526 PF05979 Bacterial protein of unknown function (DUF896) BCJMU02_3527 PF00239 Resolvase, N terminal domain BCJMU02_3528 PF01726 LexA DNA binding domain BCJMU02_3528 PF00717 Peptidase S24-like BCJMU02_3531 PF03551 Transcriptional regulator PadR-like family BCJMU02_3533 PF00120 Glutamine synthetase, catalytic domain BCJMU02_3533 PF03951 Glutamine synthetase, beta-Grasp domain BCJMU02_3534 PF13411 MerR HTH family regulatory protein BCJMU02_3535 PF06838 Methionine gamma-lyase BCJMU02_3536 PF01926 50S ribosome-binding GTPase BCJMU02_3536 PF13167 GTP-binding GTPase N-terminal BCJMU02_3536 PF16360 GTP-binding GTPase Middle Region BCJMU02_3537 PF03458 UPF0126 domain BCJMU02_3539 PF00004 ATPase family associated with various cellular activities (AAA) BCJMU02_3539 PF17866 AAA lid domain BCJMU02_3542 PF17209 Hfq protein BCJMU02_3545 PF01476 LysM domain BCJMU02_3545 PF06725 3D domain BCJMU02_3546 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BCJMU02_3546 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BCJMU02_3547 PF00294 pfkB family carbohydrate kinase BCJMU02_3548 PF00455 DeoR C terminal sensor domain BCJMU02_3548 PF08220 DeoR-like helix-turn-helix domain BCJMU02_3549 PF00465 Iron-containing alcohol dehydrogenase BCJMU02_3550 PF04238 Protein of unknown function (DUF420) BCJMU02_3552 PF00324 Amino acid permease BCJMU02_3553 PF00041 Fibronectin type III domain BCJMU02_3553 PF00704 Glycosyl hydrolases family 18 BCJMU02_3555 PF00149 Calcineurin-like phosphoesterase BCJMU02_3555 PF10518 TAT (twin-arginine translocation) pathway signal sequence BCJMU02_3556 PF01226 Formate/nitrite transporter BCJMU02_3557 PF00216 Bacterial DNA-binding protein BCJMU02_3558 PF00403 Heavy-metal-associated domain BCJMU02_3559 PF00403 Heavy-metal-associated domain BCJMU02_3560 PF02583 Metal-sensitive transcriptional repressor BCJMU02_3561 PF03180 NLPA lipoprotein BCJMU02_3564 PF00756 Putative esterase BCJMU02_3565 PF00005 ABC transporter BCJMU02_3566 PF01032 FecCD transport family BCJMU02_3567 PF01032 FecCD transport family BCJMU02_3568 PF01497 Periplasmic binding protein BCJMU02_3569 PF03372 Endonuclease/Exonuclease/phosphatase family BCJMU02_3570 PF02805 Metal binding domain of Ada BCJMU02_3570 PF12833 Helix-turn-helix domain BCJMU02_3571 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BCJMU02_3571 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain BCJMU02_3572 PF00730 HhH-GPD superfamily base excision DNA repair protein BCJMU02_3572 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain BCJMU02_3573 PF01546 Peptidase family M20/M25/M40 BCJMU02_3573 PF07687 Peptidase dimerisation domain BCJMU02_3576 PF13614 AAA domain BCJMU02_3577 PF08280 M protein trans-acting positive regulator (MGA) HTH domain BCJMU02_3577 PF00874 PRD domain BCJMU02_3577 PF05043 Mga helix-turn-helix domain BCJMU02_3578 PF01022 Bacterial regulatory protein, arsR family BCJMU02_3579 PF03707 Bacterial signalling protein N terminal repeat BCJMU02_3579 PF00990 Diguanylate cyclase, GGDEF domain BCJMU02_3579 PF00563 EAL domain BCJMU02_3580 PF04101 Glycosyltransferase family 28 C-terminal domain BCJMU02_3580 PF03033 Glycosyltransferase family 28 N-terminal domain BCJMU02_3582 PF16363 GDP-mannose 4,6 dehydratase BCJMU02_3583 PF02719 Polysaccharide biosynthesis protein BCJMU02_3583 PF08485 Polysaccharide biosynthesis protein C-terminal BCJMU02_3588 PF10787 Uncharacterised protein from bacillus cereus group BCJMU02_3589 PF04172 LrgB-like family BCJMU02_3590 PF00155 Aminotransferase class I and II BCJMU02_3590 PF00392 Bacterial regulatory proteins, gntR family BCJMU02_3592 PF00388 Phosphatidylinositol-specific phospholipase C, X domain BCJMU02_3593 PF00082 Subtilase family BCJMU02_3594 PF07486 Cell Wall Hydrolase BCJMU02_3596 PF00884 Sulfatase BCJMU02_3597 PF00350 Dynamin family BCJMU02_3599 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family BCJMU02_3600 PF08676 MutL C terminal dimerisation domain BCJMU02_3600 PF01119 DNA mismatch repair protein, C-terminal domain BCJMU02_3601 PF01624 MutS domain I BCJMU02_3601 PF05188 MutS domain II BCJMU02_3601 PF05192 MutS domain III BCJMU02_3601 PF05190 MutS family domain IV BCJMU02_3601 PF00488 MutS domain V BCJMU02_3602 PF10628 Outer spore coat protein E (CotE) BCJMU02_3603 PF06133 Control of competence regulator ComK, YlbF/YmcA BCJMU02_3604 PF04055 Radical SAM superfamily BCJMU02_3604 PF01938 TRAM domain BCJMU02_3604 PF00919 Uncharacterized protein family UPF0004 BCJMU02_3605 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BCJMU02_3606 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II BCJMU02_3606 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase BCJMU02_3606 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg BCJMU02_3607 PF01244 Membrane dipeptidase (Peptidase family M19) BCJMU02_3608 PF04232 Stage V sporulation protein S (SpoVS) BCJMU02_3609 PF13277 YmdB-like protein BCJMU02_3610 PF12072 Domain of unknown function (DUF3552) BCJMU02_3610 PF00013 KH domain BCJMU02_3610 PF01966 HD domain BCJMU02_3611 PF00154 recA bacterial DNA recombination protein BCJMU02_3612 PF02464 Competence-damaged protein BCJMU02_3612 PF18146 Damage-inducible protein CinA KH domain BCJMU02_3612 PF00994 Probable molybdopterin binding domain BCJMU02_3613 PF01066 CDP-alcohol phosphatidyltransferase BCJMU02_3614 PF13464 Domain of unknown function (DUF4115) BCJMU02_3615 PF11868 Protein of unknown function (DUF3388) BCJMU02_3616 PF11588 Protein of unknown function (DUF3243) BCJMU02_3618 PF00675 Insulinase (Peptidase family M16) BCJMU02_3618 PF05193 Peptidase M16 inactive domain BCJMU02_3619 PF05193 Peptidase M16 inactive domain BCJMU02_3620 PF02653 Branched-chain amino acid transport system / permease component BCJMU02_3621 PF02653 Branched-chain amino acid transport system / permease component BCJMU02_3622 PF00005 ABC transporter BCJMU02_3623 PF02608 ABC transporter substrate-binding protein PnrA-like BCJMU02_3624 PF00392 Bacterial regulatory proteins, gntR family BCJMU02_3624 PF07702 UTRA domain BCJMU02_3625 PF17854 FtsK alpha domain BCJMU02_3625 PF09397 Ftsk gamma domain BCJMU02_3625 PF01580 FtsK/SpoIIIE family BCJMU02_3626 PF14035 YlzJ-like protein BCJMU02_3627 PF00574 Clp protease BCJMU02_3628 PF17770 Ribonuclease J C-terminal domain BCJMU02_3628 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain BCJMU02_3628 PF00753 Metallo-beta-lactamase superfamily BCJMU02_3630 PF00701 Dihydrodipicolinate synthetase family BCJMU02_3631 PF00696 Amino acid kinase family BCJMU02_3631 PF13840 ACT domain BCJMU02_3632 PF02774 Semialdehyde dehydrogenase, dimerisation domain BCJMU02_3632 PF01118 Semialdehyde dehydrogenase, NAD binding domain BCJMU02_3633 PF02441 Flavoprotein BCJMU02_3634 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BCJMU02_3634 PF16924 Dipicolinate synthase subunit A N-terminal domain BCJMU02_3635 PF05239 PRC-barrel domain BCJMU02_3636 PF00675 Insulinase (Peptidase family M16) BCJMU02_3636 PF05193 Peptidase M16 inactive domain BCJMU02_3637 PF01522 Polysaccharide deacetylase BCJMU02_3638 PF00575 S1 RNA binding domain BCJMU02_3638 PF03725 3' exoribonuclease family, domain 2 BCJMU02_3638 PF01138 3' exoribonuclease family, domain 1 BCJMU02_3638 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain BCJMU02_3638 PF00013 KH domain BCJMU02_3639 PF00312 Ribosomal protein S15 BCJMU02_3640 PF06574 FAD synthetase BCJMU02_3640 PF01687 Riboflavin kinase BCJMU02_3641 PF01509 TruB family pseudouridylate synthase (N terminal domain) BCJMU02_3641 PF16198 tRNA pseudouridylate synthase B C-terminal domain BCJMU02_3642 PF02033 Ribosome-binding factor A BCJMU02_3643 PF04456 Protein of unknown function (DUF503) BCJMU02_3644 PF04760 Translation initiation factor IF-2, N-terminal region BCJMU02_3644 PF11987 Translation-initiation factor 2 BCJMU02_3644 PF00009 Elongation factor Tu GTP binding domain BCJMU02_3645 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family BCJMU02_3646 PF04296 Protein of unknown function (DUF448) BCJMU02_3647 PF13184 NusA-like KH domain BCJMU02_3647 PF08529 NusA N-terminal domain BCJMU02_3647 PF00575 S1 RNA binding domain BCJMU02_3648 PF17384 RimP C-terminal SH3 domain BCJMU02_3648 PF02576 RimP N-terminal domain BCJMU02_3649 PF11490 DNA polymerase III polC-type N-terminus II BCJMU02_3649 PF14480 DNA polymerase III polC-type N-terminus I BCJMU02_3649 PF07733 Bacterial DNA polymerase III alpha NTPase domain BCJMU02_3649 PF00929 Exonuclease BCJMU02_3649 PF14579 Helix-hairpin-helix motif BCJMU02_3649 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BCJMU02_3649 PF02811 PHP domain BCJMU02_3650 PF01348 Type II intron maturase BCJMU02_3650 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) BCJMU02_3652 PF00929 Exonuclease BCJMU02_3652 PF07733 Bacterial DNA polymerase III alpha NTPase domain BCJMU02_3652 PF11490 DNA polymerase III polC-type N-terminus II BCJMU02_3652 PF14480 DNA polymerase III polC-type N-terminus I BCJMU02_3652 PF02811 PHP domain BCJMU02_3652 PF14579 Helix-hairpin-helix motif BCJMU02_3652 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BCJMU02_3653 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BCJMU02_3653 PF03129 Anticodon binding domain BCJMU02_3653 PF04073 Aminoacyl-tRNA editing domain BCJMU02_3654 PF17820 PDZ domain BCJMU02_3654 PF02163 Peptidase family M50 BCJMU02_3655 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain BCJMU02_3655 PF13288 DXP reductoisomerase C-terminal domain BCJMU02_3655 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase BCJMU02_3657 PF01255 Putative undecaprenyl diphosphate synthase BCJMU02_3658 PF01765 Ribosome recycling factor BCJMU02_3659 PF00696 Amino acid kinase family BCJMU02_3660 PF00889 Elongation factor TS BCJMU02_3661 PF00318 Ribosomal protein S2 BCJMU02_3662 PF08222 CodY helix-turn-helix domain BCJMU02_3662 PF06018 CodY GAF-like domain BCJMU02_3663 PF07724 AAA domain (Cdc48 subfamily) BCJMU02_3663 PF00004 ATPase family associated with various cellular activities (AAA) BCJMU02_3663 PF10431 C-terminal, D2-small domain, of ClpB protein BCJMU02_3664 PF00227 Proteasome subunit BCJMU02_3665 PF00589 Phage integrase family BCJMU02_3665 PF02899 Phage integrase, N-terminal SAM-like domain BCJMU02_3666 PF01134 Glucose inhibited division protein A BCJMU02_3667 PF01396 Topoisomerase DNA binding C4 zinc finger BCJMU02_3667 PF01131 DNA topoisomerase BCJMU02_3667 PF01751 Toprim domain BCJMU02_3668 PF02481 DNA recombination-mediator protein A BCJMU02_3669 PF02629 CoA binding domain BCJMU02_3669 PF00549 CoA-ligase BCJMU02_3670 PF08442 ATP-grasp domain BCJMU02_3670 PF00549 CoA-ligase BCJMU02_3671 PF01351 Ribonuclease HII BCJMU02_3672 PF01926 50S ribosome-binding GTPase BCJMU02_3673 PF10502 Signal peptidase, peptidase S26 BCJMU02_3674 PF01245 Ribosomal protein L19 BCJMU02_3675 PF01746 tRNA (Guanine-1)-methyltransferase BCJMU02_3676 PF05239 PRC-barrel domain BCJMU02_3676 PF01782 RimM N-terminal domain BCJMU02_3678 PF00886 Ribosomal protein S16 BCJMU02_3679 PF00448 SRP54-type protein, GTPase domain BCJMU02_3679 PF02881 SRP54-type protein, helical bundle domain BCJMU02_3679 PF02978 Signal peptide binding domain BCJMU02_3680 PF04297 Putative helix-turn-helix protein, YlxM / p13 like BCJMU02_3681 PF00448 SRP54-type protein, GTPase domain BCJMU02_3681 PF02881 SRP54-type protein, helical bundle domain BCJMU02_3682 PF06470 SMC proteins Flexible Hinge Domain BCJMU02_3682 PF02463 RecF/RecN/SMC N terminal domain BCJMU02_3683 PF00035 Double-stranded RNA binding motif BCJMU02_3683 PF14622 Ribonuclease-III-like BCJMU02_3684 PF00550 Phosphopantetheine attachment site BCJMU02_3686 PF00698 Acyl transferase domain BCJMU02_3687 PF02504 Fatty acid synthesis protein BCJMU02_3688 PF03061 Thioesterase superfamily BCJMU02_3689 PF00270 DEAD/DEAH box helicase BCJMU02_3689 PF00271 Helicase conserved C-terminal domain BCJMU02_3689 PF17191 RecG wedge domain BCJMU02_3690 PF13684 Dihydroxyacetone kinase family BCJMU02_3690 PF02734 DAK2 domain BCJMU02_3691 PF03780 Asp23 family, cell envelope-related function BCJMU02_3692 PF00830 Ribosomal L28 family BCJMU02_3693 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain BCJMU02_3693 PF04263 Thiamin pyrophosphokinase, catalytic domain BCJMU02_3694 PF00834 Ribulose-phosphate 3 epimerase family BCJMU02_3695 PF03193 RsgA GTPase BCJMU02_3695 PF16745 RsgA N-terminal domain BCJMU02_3696 PF00069 Protein kinase domain BCJMU02_3696 PF03793 PASTA domain BCJMU02_3698 PF04055 Radical SAM superfamily BCJMU02_3699 PF01029 NusB family BCJMU02_3699 PF01189 16S rRNA methyltransferase RsmB/F BCJMU02_3700 PF02911 Formyl transferase, C-terminal domain BCJMU02_3700 PF00551 Formyl transferase BCJMU02_3701 PF01327 Polypeptide deformylase BCJMU02_3702 PF04851 Type III restriction enzyme, res subunit BCJMU02_3702 PF18319 PriA DNA helicase Cys-rich region (CRR) domain BCJMU02_3702 PF00271 Helicase conserved C-terminal domain BCJMU02_3702 PF17764 3′ DNA-binding domain (3′BD) BCJMU02_3702 PF18074 Primosomal protein N C-terminal domain BCJMU02_3703 PF04127 DNA / pantothenate metabolism flavoprotein BCJMU02_3703 PF02441 Flavoprotein BCJMU02_3704 PF01192 RNA polymerase Rpb6 BCJMU02_3705 PF00625 Guanylate kinase BCJMU02_3706 PF04025 Domain of unknown function (DUF370) BCJMU02_3707 PF03755 YicC-like family, N-terminal region BCJMU02_3707 PF08340 Domain of unknown function (DUF1732) BCJMU02_3708 PF00690 Cation transporter/ATPase, N-terminus BCJMU02_3708 PF00689 Cation transporting ATPase, C-terminus BCJMU02_3709 PF05670 NFACT protein RNA binding domain BCJMU02_3710 PF00557 Metallopeptidase family M24 BCJMU02_3710 PF01321 Creatinase/Prolidase N-terminal domain BCJMU02_3716 PF13419 Haloacid dehalogenase-like hydrolase BCJMU02_3717 PF00156 Phosphoribosyl transferase domain BCJMU02_3718 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family BCJMU02_3719 PF01180 Dihydroorotate dehydrogenase BCJMU02_3720 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B BCJMU02_3720 PF00175 Oxidoreductase NAD-binding domain BCJMU02_3721 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BCJMU02_3721 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BCJMU02_3721 PF02142 MGS-like domain BCJMU02_3722 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain BCJMU02_3722 PF00117 Glutamine amidotransferase class-I BCJMU02_3723 PF01979 Amidohydrolase family BCJMU02_3724 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BCJMU02_3724 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BCJMU02_3725 PF00860 Permease family BCJMU02_3726 PF00156 Phosphoribosyl transferase domain BCJMU02_3727 PF00849 RNA pseudouridylate synthase BCJMU02_3727 PF01479 S4 domain BCJMU02_3728 PF01252 Signal peptidase (SPase) II BCJMU02_3730 PF08264 Anticodon-binding domain of tRNA BCJMU02_3730 PF00133 tRNA synthetases class I (I, L, M and V) BCJMU02_3730 PF06827 Zinc finger found in FPG and IleRS BCJMU02_3731 PF05103 DivIVA protein BCJMU02_3732 PF01479 S4 domain BCJMU02_3732 PF17774 Putative RNA-binding domain in YlmH BCJMU02_3733 PF02325 YGGT family BCJMU02_3734 PF04472 Cell division protein SepF BCJMU02_3735 PF01168 Alanine racemase, N-terminal domain BCJMU02_3736 PF02578 Multi-copper polyphenol oxidoreductase laccase BCJMU02_3737 PF05239 PRC-barrel domain BCJMU02_3738 PF04545 Sigma-70, region 4 BCJMU02_3738 PF04539 Sigma-70 region 3 BCJMU02_3738 PF04542 Sigma-70 region 2 BCJMU02_3739 PF04542 Sigma-70 region 2 BCJMU02_3739 PF04545 Sigma-70, region 4 BCJMU02_3740 PF03419 Sporulation factor SpoIIGA BCJMU02_3741 PF12327 FtsZ family, C-terminal domain BCJMU02_3741 PF00091 Tubulin/FtsZ family, GTPase domain BCJMU02_3742 PF02491 SHS2 domain inserted in FTSA BCJMU02_3743 PF03799 Cell division protein FtsQ BCJMU02_3743 PF08478 POTRA domain, FtsQ-type BCJMU02_3744 PF01565 FAD binding domain BCJMU02_3744 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain BCJMU02_3745 PF03033 Glycosyltransferase family 28 N-terminal domain BCJMU02_3745 PF04101 Glycosyltransferase family 28 C-terminal domain BCJMU02_3746 PF01098 Cell cycle protein BCJMU02_3747 PF02875 Mur ligase family, glutamate ligase domain BCJMU02_3747 PF08245 Mur ligase middle domain BCJMU02_3748 PF00953 Glycosyl transferase family 4 BCJMU02_3748 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 BCJMU02_3749 PF02875 Mur ligase family, glutamate ligase domain BCJMU02_3749 PF08245 Mur ligase middle domain BCJMU02_3749 PF01225 Mur ligase family, catalytic domain BCJMU02_3750 PF03793 PASTA domain BCJMU02_3750 PF03717 Penicillin-binding Protein dimerisation domain BCJMU02_3750 PF00905 Penicillin binding protein transpeptidase domain BCJMU02_3751 PF00905 Penicillin binding protein transpeptidase domain BCJMU02_3751 PF03793 PASTA domain BCJMU02_3751 PF03717 Penicillin-binding Protein dimerisation domain BCJMU02_3752 PF04977 Septum formation initiator BCJMU02_3753 PF01795 MraW methylase family BCJMU02_3754 PF10079 Bacillithiol biosynthesis BshC BCJMU02_3755 PF08546 Ketopantoate reductase PanE/ApbA C terminal BCJMU02_3755 PF02558 Ketopantoate reductase PanE/ApbA BCJMU02_3756 PF00583 Acetyltransferase (GNAT) family BCJMU02_3758 PF01783 Ribosomal L32p protein family BCJMU02_3759 PF02620 Large ribosomal RNA subunit accumulation protein YceD BCJMU02_3760 PF05636 HIGH Nucleotidyl Transferase BCJMU02_3761 PF05362 Lon protease (S16) C-terminal proteolytic domain BCJMU02_3761 PF13180 PDZ domain BCJMU02_3762 PF01734 Patatin-like phospholipase BCJMU02_3763 PF07670 Nucleoside recognition BCJMU02_3764 PF01467 Cytidylyltransferase-like BCJMU02_3767 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) BCJMU02_3768 PF06133 Control of competence regulator ComK, YlbF/YmcA BCJMU02_3769 PF00300 Histidine phosphatase superfamily (branch 1) BCJMU02_3770 PF14003 YlbE-like protein BCJMU02_3771 PF14071 Putative coat protein BCJMU02_3772 PF00188 Cysteine-rich secretory protein family BCJMU02_3772 PF14504 CAP-associated N-terminal BCJMU02_3773 PF08868 YugN-like family BCJMU02_3774 PF00795 Carbon-nitrogen hydrolase BCJMU02_3775 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) BCJMU02_3776 PF03626 Prokaryotic Cytochrome C oxidase subunit IV BCJMU02_3777 PF00510 Cytochrome c oxidase subunit III BCJMU02_3778 PF00115 Cytochrome C and Quinol oxidase polypeptide I BCJMU02_3779 PF00034 Cytochrome c BCJMU02_3779 PF02790 Cytochrome C oxidase subunit II, transmembrane domain BCJMU02_3779 PF00116 Cytochrome C oxidase subunit II, periplasmic domain BCJMU02_3780 PF01040 UbiA prenyltransferase family BCJMU02_3781 PF02628 Cytochrome oxidase assembly protein BCJMU02_3782 PF02785 Biotin carboxylase C-terminal domain BCJMU02_3782 PF00289 Biotin carboxylase, N-terminal domain BCJMU02_3782 PF00364 Biotin-requiring enzyme BCJMU02_3782 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BCJMU02_3782 PF00682 HMGL-like BCJMU02_3782 PF02436 Conserved carboxylase domain BCJMU02_3783 PF01098 Cell cycle protein BCJMU02_3784 PF07408 Protein of unknown function (DUF1507) BCJMU02_3786 PF13638 PIN domain BCJMU02_3786 PF02562 PhoH-like protein BCJMU02_3788 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) BCJMU02_3790 PF14036 YlaH-like protein BCJMU02_3791 PF14492 Elongation Factor G, domain II BCJMU02_3791 PF00679 Elongation factor G C-terminus BCJMU02_3791 PF00009 Elongation factor Tu GTP binding domain BCJMU02_3791 PF03144 Elongation factor Tu domain 2 BCJMU02_3793 PF00459 Inositol monophosphatase family BCJMU02_3795 PF06335 Protein of unknown function (DUF1054) BCJMU02_3796 PF05256 Uncharacterised protein family (UPF0223) BCJMU02_3797 PF01276 Orn/Lys/Arg decarboxylase, major domain BCJMU02_3797 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain BCJMU02_3805 PF07992 Pyridine nucleotide-disulphide oxidoreductase BCJMU02_3805 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BCJMU02_3806 PF02817 e3 binding domain BCJMU02_3806 PF00364 Biotin-requiring enzyme BCJMU02_3806 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BCJMU02_3807 PF02780 Transketolase, C-terminal domain BCJMU02_3807 PF02779 Transketolase, pyrimidine binding domain BCJMU02_3808 PF00676 Dehydrogenase E1 component BCJMU02_3810 PF01327 Polypeptide deformylase BCJMU02_3812 PF07288 Protein of unknown function (DUF1447) BCJMU02_3813 PF17770 Ribonuclease J C-terminal domain BCJMU02_3813 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain BCJMU02_3813 PF00753 Metallo-beta-lactamase superfamily BCJMU02_3814 PF02080 TrkA-C domain BCJMU02_3814 PF02254 TrkA-N domain BCJMU02_3816 PF01546 Peptidase family M20/M25/M40 BCJMU02_3816 PF07687 Peptidase dimerisation domain BCJMU02_3817 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal BCJMU02_3817 PF00132 Bacterial transferase hexapeptide (six repeats) BCJMU02_3817 PF14602 Hexapeptide repeat of succinyl-transferase BCJMU02_3818 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BCJMU02_3818 PF03466 LysR substrate binding domain BCJMU02_3821 PF04308 Ribonuclease H-like BCJMU02_3823 PF08796 Protein of unknown function (DUF1797) BCJMU02_3826 PF00563 EAL domain BCJMU02_3826 PF10388 EAL-domain associated signalling protein domain BCJMU02_3828 PF10518 TAT (twin-arginine translocation) pathway signal sequence BCJMU02_3828 PF00149 Calcineurin-like phosphoesterase BCJMU02_3830 PF13090 Polyphosphate kinase C-terminal domain 2 BCJMU02_3830 PF17941 Polyphosphate kinase C-terminal domain 1 BCJMU02_3830 PF02503 Polyphosphate kinase middle domain BCJMU02_3830 PF13089 Polyphosphate kinase N-terminal domain BCJMU02_3831 PF02541 Ppx/GppA phosphatase family BCJMU02_3832 PF14177 YkyB-like protein BCJMU02_3837 PF07690 Major Facilitator Superfamily BCJMU02_3839 PF08267 Cobalamin-independent synthase, N-terminal domain BCJMU02_3839 PF01717 Cobalamin-independent synthase, Catalytic domain BCJMU02_3841 PF14040 Deoxyribonuclease NucA/NucB BCJMU02_3843 PF00512 His Kinase A (phospho-acceptor) domain BCJMU02_3843 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCJMU02_3845 PF00155 Aminotransferase class I and II BCJMU02_3846 PF00356 Bacterial regulatory proteins, lacI family BCJMU02_3846 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BCJMU02_3847 PF00528 Binding-protein-dependent transport system inner membrane component BCJMU02_3848 PF00528 Binding-protein-dependent transport system inner membrane component BCJMU02_3849 PF13416 Bacterial extracellular solute-binding protein BCJMU02_3850 PF00128 Alpha amylase, catalytic domain BCJMU02_3850 PF02903 Alpha amylase, N-terminal ig-like domain BCJMU02_3850 PF16657 Maltogenic Amylase, C-terminal domain BCJMU02_3851 PF00128 Alpha amylase, catalytic domain BCJMU02_3851 PF16657 Maltogenic Amylase, C-terminal domain BCJMU02_3852 PF17912 MalK OB fold domain BCJMU02_3852 PF00005 ABC transporter BCJMU02_3852 PF03459 TOBE domain BCJMU02_3860 PF02803 Thiolase, C-terminal domain BCJMU02_3860 PF00108 Thiolase, N-terminal domain BCJMU02_3861 PF00293 NUDIX domain BCJMU02_3866 PF03551 Transcriptional regulator PadR-like family BCJMU02_3869 PF01008 Initiation factor 2 subunit family BCJMU02_3870 PF01636 Phosphotransferase enzyme family BCJMU02_3871 PF00795 Carbon-nitrogen hydrolase BCJMU02_3872 PF00155 Aminotransferase class I and II BCJMU02_3873 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain BCJMU02_3873 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain BCJMU02_3875 PF00596 Class II Aldolase and Adducin N-terminal domain BCJMU02_3876 PF03079 ARD/ARD' family BCJMU02_3879 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BCJMU02_3879 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BCJMU02_3880 PF08448 PAS fold BCJMU02_3880 PF00990 Diguanylate cyclase, GGDEF domain BCJMU02_3881 PF00881 Nitroreductase family BCJMU02_3884 PF05524 PEP-utilising enzyme, N-terminal BCJMU02_3884 PF00391 PEP-utilising enzyme, mobile domain BCJMU02_3884 PF02896 PEP-utilising enzyme, TIM barrel domain BCJMU02_3885 PF00381 PTS HPr component phosphorylation site BCJMU02_3886 PF02378 Phosphotransferase system, EIIC BCJMU02_3886 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BCJMU02_3886 PF00367 phosphotransferase system, EIIB BCJMU02_3888 PF03123 CAT RNA binding domain BCJMU02_3888 PF00874 PRD domain BCJMU02_3890 PF00392 Bacterial regulatory proteins, gntR family BCJMU02_3890 PF07702 UTRA domain BCJMU02_3891 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase BCJMU02_3892 PF01979 Amidohydrolase family BCJMU02_3894 PF04079 Segregation and condensation complex subunit ScpB BCJMU02_3895 PF02616 Segregation and condensation protein ScpA BCJMU02_3896 PF03745 Domain of unknown function (DUF309) BCJMU02_3897 PF00583 Acetyltransferase (GNAT) family BCJMU02_3899 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BCJMU02_3900 PF06207 Protein of unknown function (DUF1002) BCJMU02_3902 PF03323 Bacillus/Clostridium GerA spore germination protein BCJMU02_3903 PF14097 Stage V sporulation protein AE1 BCJMU02_3904 PF03862 SpoVAC/SpoVAEB sporulation membrane protein BCJMU02_3905 PF07451 Stage V sporulation protein AD (SpoVAD) BCJMU02_3906 PF03862 SpoVAC/SpoVAEB sporulation membrane protein BCJMU02_3907 PF13782 Stage V sporulation protein AB BCJMU02_3908 PF12164 Stage V sporulation protein AA BCJMU02_3909 PF00209 Sodium:neurotransmitter symporter family BCJMU02_3910 PF04539 Sigma-70 region 3 BCJMU02_3910 PF04545 Sigma-70, region 4 BCJMU02_3910 PF04542 Sigma-70 region 2 BCJMU02_3911 PF13581 Histidine kinase-like ATPase domain BCJMU02_3912 PF01740 STAS domain BCJMU02_3913 PF07943 Penicillin-binding protein 5, C-terminal domain BCJMU02_3913 PF00768 D-alanyl-D-alanine carboxypeptidase BCJMU02_3914 PF00392 Bacterial regulatory proteins, gntR family BCJMU02_3915 PF00005 ABC transporter BCJMU02_3918 PF01047 MarR family BCJMU02_3920 PF00860 Permease family BCJMU02_3921 PF01544 CorA-like Mg2+ transporter protein BCJMU02_3922 PF02885 Glycosyl transferase family, helical bundle domain BCJMU02_3922 PF00591 Glycosyl transferase family, a/b domain BCJMU02_3922 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain BCJMU02_3923 PF01048 Phosphorylase superfamily BCJMU02_3924 PF01676 Metalloenzyme superfamily BCJMU02_3926 PF02899 Phage integrase, N-terminal SAM-like domain BCJMU02_3926 PF00589 Phage integrase family BCJMU02_3927 PF14004 Protein of unknown function (DUF4227) BCJMU02_3928 PF01475 Ferric uptake regulator family BCJMU02_3929 PF01944 Stage II sporulation protein M BCJMU02_3931 PF00293 NUDIX domain BCJMU02_3932 PF13072 Mother cell inhibitor of FtsZ BCJMU02_3933 PF00248 Aldo/keto reductase family BCJMU02_3934 PF00248 Aldo/keto reductase family BCJMU02_3935 PF04229 GrpB protein BCJMU02_3935 PF13673 Acetyltransferase (GNAT) domain BCJMU02_3937 PF00565 Staphylococcal nuclease homologue BCJMU02_3937 PF02872 5'-nucleotidase, C-terminal domain BCJMU02_3937 PF00746 LPXTG cell wall anchor motif BCJMU02_3937 PF00149 Calcineurin-like phosphoesterase BCJMU02_3939 PF12146 Serine aminopeptidase, S33 BCJMU02_3940 PF03553 Na+/H+ antiporter family BCJMU02_3940 PF13726 Na+-H+ antiporter family BCJMU02_3941 PF00356 Bacterial regulatory proteins, lacI family BCJMU02_3942 PF00583 Acetyltransferase (GNAT) family BCJMU02_3943 PF12146 Serine aminopeptidase, S33 BCJMU02_3944 PF10827 Protein of unknown function (DUF2552) BCJMU02_3946 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BCJMU02_3946 PF01872 RibD C-terminal domain BCJMU02_3947 PF00677 Lumazine binding domain BCJMU02_3948 PF00925 GTP cyclohydrolase II BCJMU02_3948 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase BCJMU02_3949 PF00885 6,7-dimethyl-8-ribityllumazine synthase BCJMU02_3951 PF06968 Biotin and Thiamin Synthesis associated domain BCJMU02_3951 PF04055 Radical SAM superfamily BCJMU02_3952 PF13847 Methyltransferase domain BCJMU02_3953 PF12697 Alpha/beta hydrolase family BCJMU02_3953 PF08241 Methyltransferase domain BCJMU02_3954 PF00155 Aminotransferase class I and II BCJMU02_3956 PF00202 Aminotransferase class-III BCJMU02_3958 PF03553 Na+/H+ antiporter family BCJMU02_3959 PF02872 5'-nucleotidase, C-terminal domain BCJMU02_3959 PF00149 Calcineurin-like phosphoesterase BCJMU02_3961 PF13404 AsnC-type helix-turn-helix domain BCJMU02_3961 PF01037 Lrp/AsnC ligand binding domain BCJMU02_3964 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BCJMU02_3964 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BCJMU02_3965 PF00202 Aminotransferase class-III BCJMU02_3966 PF00696 Amino acid kinase family BCJMU02_3967 PF01960 ArgJ family BCJMU02_3968 PF01118 Semialdehyde dehydrogenase, NAD binding domain BCJMU02_3968 PF02774 Semialdehyde dehydrogenase, dimerisation domain BCJMU02_3970 PF00106 short chain dehydrogenase BCJMU02_3971 PF00753 Metallo-beta-lactamase superfamily BCJMU02_3972 PF03807 NADP oxidoreductase coenzyme F420-dependent BCJMU02_3972 PF14748 Pyrroline-5-carboxylate reductase dimerisation BCJMU02_3973 PF03313 Serine dehydratase alpha chain BCJMU02_3974 PF03315 Serine dehydratase beta chain BCJMU02_3974 PF01842 ACT domain BCJMU02_3976 PF00753 Metallo-beta-lactamase superfamily BCJMU02_3976 PF12706 Beta-lactamase superfamily domain BCJMU02_3978 PF11798 IMS family HHH motif BCJMU02_3978 PF11799 impB/mucB/samB family C-terminal domain BCJMU02_3978 PF00817 impB/mucB/samB family BCJMU02_3980 PF07687 Peptidase dimerisation domain BCJMU02_3980 PF01546 Peptidase family M20/M25/M40 BCJMU02_3981 PF13302 Acetyltransferase (GNAT) domain BCJMU02_3983 PF03734 L,D-transpeptidase catalytic domain BCJMU02_3984 PF06081 Aromatic acid exporter family member 1 BCJMU02_3984 PF11728 Putative aromatic acid exporter C-terminal domain BCJMU02_3985 PF00005 ABC transporter BCJMU02_3986 PF00528 Binding-protein-dependent transport system inner membrane component BCJMU02_3987 PF00497 Bacterial extracellular solute-binding proteins, family 3 BCJMU02_3988 PF06491 Disulphide isomerase BCJMU02_3989 PF11208 Protein of unknown function (DUF2992) BCJMU02_3990 PF09297 NADH pyrophosphatase zinc ribbon domain BCJMU02_3990 PF00293 NUDIX domain BCJMU02_3991 PF01098 Cell cycle protein BCJMU02_3992 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BCJMU02_3992 PF02817 e3 binding domain BCJMU02_3992 PF00364 Biotin-requiring enzyme BCJMU02_3993 PF02780 Transketolase, C-terminal domain BCJMU02_3993 PF02779 Transketolase, pyrimidine binding domain BCJMU02_3994 PF00676 Dehydrogenase E1 component BCJMU02_3995 PF07992 Pyridine nucleotide-disulphide oxidoreductase BCJMU02_3995 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BCJMU02_3996 PF00871 Acetokinase family BCJMU02_3997 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BCJMU02_3997 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BCJMU02_3998 PF01515 Phosphate acetyl/butaryl transferase BCJMU02_3999 PF02954 Bacterial regulatory protein, Fis family BCJMU02_3999 PF00989 PAS fold BCJMU02_3999 PF00158 Sigma-54 interaction domain BCJMU02_4001 PF03009 Glycerophosphoryl diester phosphodiesterase family BCJMU02_4002 PF14174 YycC-like protein BCJMU02_4004 PF08769 Sporulation initiation factor Spo0A C terminal BCJMU02_4004 PF00072 Response regulator receiver domain BCJMU02_4012 PF02796 Helix-turn-helix domain of resolvase BCJMU02_4012 PF00239 Resolvase, N terminal domain BCJMU02_4023 PF08769 Sporulation initiation factor Spo0A C terminal BCJMU02_4023 PF00072 Response regulator receiver domain BCJMU02_4024 PF17820 PDZ domain BCJMU02_4024 PF05580 SpoIVB peptidase S55 BCJMU02_4025 PF13476 AAA domain BCJMU02_4026 PF01316 Arginine repressor, DNA binding domain BCJMU02_4026 PF02863 Arginine repressor, C-terminal domain BCJMU02_4027 PF01479 S4 domain BCJMU02_4027 PF01728 FtsJ-like methyltransferase BCJMU02_4028 PF02779 Transketolase, pyrimidine binding domain BCJMU02_4028 PF02780 Transketolase, C-terminal domain BCJMU02_4028 PF13292 1-deoxy-D-xylulose-5-phosphate synthase BCJMU02_4029 PF00348 Polyprenyl synthetase BCJMU02_4030 PF02609 Exonuclease VII small subunit BCJMU02_4031 PF02601 Exonuclease VII, large subunit BCJMU02_4031 PF13742 OB-fold nucleic acid binding domain BCJMU02_4032 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain BCJMU02_4032 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain BCJMU02_4033 PF01029 NusB family BCJMU02_4034 PF03780 Asp23 family, cell envelope-related function BCJMU02_4035 PF00289 Biotin carboxylase, N-terminal domain BCJMU02_4035 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BCJMU02_4035 PF02785 Biotin carboxylase C-terminal domain BCJMU02_4036 PF00364 Biotin-requiring enzyme BCJMU02_4037 PF12685 SpoIIIAH-like protein BCJMU02_4039 PF09581 Stage III sporulation protein AF (Spore_III_AF) BCJMU02_4040 PF09546 Stage III sporulation protein AE (spore_III_AE) BCJMU02_4041 PF06686 Stage III sporulation protein AC/AD protein family BCJMU02_4042 PF06686 Stage III sporulation protein AC/AD protein family BCJMU02_4043 PF09548 Stage III sporulation protein AB (spore_III_AB) BCJMU02_4048 PF08207 Elongation factor P (EF-P) KOW-like domain BCJMU02_4048 PF01132 Elongation factor P (EF-P) OB domain BCJMU02_4048 PF09285 Elongation factor P, C-terminal BCJMU02_4049 PF01321 Creatinase/Prolidase N-terminal domain BCJMU02_4049 PF00557 Metallopeptidase family M24 BCJMU02_4050 PF01220 Dehydroquinase class II BCJMU02_4051 PF11085 Conserved membrane protein YqhR BCJMU02_4052 PF07136 Protein of unknown function (DUF1385) BCJMU02_4054 PF13419 Haloacid dehalogenase-like hydrolase BCJMU02_4055 PF01325 Iron dependent repressor, N-terminal DNA binding domain BCJMU02_4055 PF02742 Iron dependent repressor, metal binding and dimerisation domain BCJMU02_4057 PF03551 Transcriptional regulator PadR-like family BCJMU02_4060 PF03099 Biotin/lipoate A/B protein ligase family BCJMU02_4061 PF00581 Rhodanese-like domain BCJMU02_4062 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BCJMU02_4062 PF00356 Bacterial regulatory proteins, lacI family BCJMU02_4064 PF00893 Small Multidrug Resistance protein BCJMU02_4065 PF00893 Small Multidrug Resistance protein BCJMU02_4073 PF00005 ABC transporter BCJMU02_4074 PF00392 Bacterial regulatory proteins, gntR family BCJMU02_4077 PF02347 Glycine cleavage system P-protein BCJMU02_4078 PF02347 Glycine cleavage system P-protein BCJMU02_4079 PF08669 Glycine cleavage T-protein C-terminal barrel domain BCJMU02_4079 PF01571 Aminomethyltransferase folate-binding domain BCJMU02_4080 PF00271 Helicase conserved C-terminal domain BCJMU02_4080 PF00176 SNF2 family N-terminal domain BCJMU02_4081 PF11079 Bacterial protein YqhG of unknown function BCJMU02_4085 PF14038 YqzE-like protein BCJMU02_4086 PF01202 Shikimate kinase BCJMU02_4091 PF07963 Prokaryotic N-terminal methylation motif BCJMU02_4095 PF13401 AAA domain BCJMU02_4095 PF11426 Tn7 transposition regulator TnsC BCJMU02_4097 PF08722 TnsA endonuclease N terminal BCJMU02_4097 PF08721 TnsA endonuclease C terminal BCJMU02_4103 PF17768 RecJ OB domain BCJMU02_4103 PF01368 DHH family BCJMU02_4103 PF10141 Single-strand DNA-specific exonuclease, C terminal domain BCJMU02_4103 PF02272 DHHA1 domain BCJMU02_4106 PF01420 Type I restriction modification DNA specificity domain BCJMU02_4107 PF02384 N-6 DNA Methylase BCJMU02_4109 PF08463 EcoEI R protein C-terminal BCJMU02_4109 PF00271 Helicase conserved C-terminal domain BCJMU02_4109 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) BCJMU02_4109 PF04851 Type III restriction enzyme, res subunit BCJMU02_4118 PF00482 Type II secretion system (T2SS), protein F BCJMU02_4119 PF00437 Type II/IV secretion system protein BCJMU02_4121 PF11117 Protein of unknown function (DUF2626) BCJMU02_4122 PF00375 Sodium:dicarboxylate symporter family BCJMU02_4128 PF04101 Glycosyltransferase family 28 C-terminal domain BCJMU02_4128 PF03033 Glycosyltransferase family 28 N-terminal domain BCJMU02_4129 PF02574 Homocysteine S-methyltransferase BCJMU02_4129 PF02965 Vitamin B12 dependent methionine synthase, activation domain BCJMU02_4129 PF02607 B12 binding domain BCJMU02_4129 PF02310 B12 binding domain BCJMU02_4129 PF00809 Pterin binding enzyme BCJMU02_4130 PF02219 Methylenetetrahydrofolate reductase BCJMU02_4130 PF02574 Homocysteine S-methyltransferase BCJMU02_4131 PF01053 Cys/Met metabolism PLP-dependent enzyme BCJMU02_4132 PF01053 Cys/Met metabolism PLP-dependent enzyme BCJMU02_4134 PF01022 Bacterial regulatory protein, arsR family BCJMU02_4136 PF00753 Metallo-beta-lactamase superfamily BCJMU02_4137 PF10958 Protein of unknown function (DUF2759) BCJMU02_4138 PF00480 ROK family BCJMU02_4139 PF06014 Bacterial protein of unknown function (DUF910) BCJMU02_4140 PF01812 5-formyltetrahydrofolate cyclo-ligase family BCJMU02_4141 PF00471 Ribosomal protein L33 BCJMU02_4142 PF00483 Nucleotidyl transferase BCJMU02_4143 PF01895 PhoU domain BCJMU02_4144 PF00005 ABC transporter BCJMU02_4145 PF00528 Binding-protein-dependent transport system inner membrane component BCJMU02_4146 PF00528 Binding-protein-dependent transport system inner membrane component BCJMU02_4147 PF12849 PBP superfamily domain BCJMU02_4148 PF00905 Penicillin binding protein transpeptidase domain BCJMU02_4148 PF03717 Penicillin-binding Protein dimerisation domain BCJMU02_4149 PF07690 Major Facilitator Superfamily BCJMU02_4150 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BCJMU02_4150 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BCJMU02_4153 PF04551 GcpE protein BCJMU02_4154 PF01475 Ferric uptake regulator family BCJMU02_4155 PF00950 ABC 3 transport family BCJMU02_4156 PF00005 ABC transporter BCJMU02_4157 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BCJMU02_4157 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BCJMU02_4158 PF11116 Protein of unknown function (DUF2624) BCJMU02_4159 PF01261 Xylose isomerase-like TIM barrel BCJMU02_4160 PF00270 DEAD/DEAH box helicase BCJMU02_4160 PF00271 Helicase conserved C-terminal domain BCJMU02_4162 PF02401 LytB protein BCJMU02_4163 PF01784 NIF3 (NGG1p interacting factor 3) BCJMU02_4164 PF04816 tRNA (adenine(22)-N(1))-methyltransferase BCJMU02_4165 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BCJMU02_4166 PF04545 Sigma-70, region 4 BCJMU02_4166 PF04539 Sigma-70 region 3 BCJMU02_4166 PF04542 Sigma-70 region 2 BCJMU02_4166 PF00140 Sigma-70 factor, region 1.2 BCJMU02_4166 PF03979 Sigma-70 factor, region 1.1 BCJMU02_4167 PF10410 DnaB-helicase binding domain of primase BCJMU02_4167 PF08275 DNA primase catalytic core, N-terminal domain BCJMU02_4167 PF01807 CHC2 zinc finger BCJMU02_4168 PF03618 Kinase/pyrophosphorylase BCJMU02_4169 PF00571 CBS domain BCJMU02_4169 PF08279 HTH domain BCJMU02_4170 PF02565 Recombination protein O C terminal BCJMU02_4170 PF11967 Recombination protein O N terminal BCJMU02_4172 PF07650 KH domain BCJMU02_4172 PF01926 50S ribosome-binding GTPase BCJMU02_4173 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BCJMU02_4174 PF01219 Prokaryotic diacylglycerol kinase BCJMU02_4175 PF02130 Uncharacterized protein family UPF0054 BCJMU02_4176 PF07697 7TM-HD extracellular BCJMU02_4176 PF01966 HD domain BCJMU02_4176 PF07698 7TM receptor with intracellular HD hydrolase BCJMU02_4177 PF02562 PhoH-like protein BCJMU02_4178 PF06898 Putative stage IV sporulation protein YqfD BCJMU02_4179 PF07873 YabP family BCJMU02_4180 PF09424 Yqey-like protein BCJMU02_4181 PF01165 Ribosomal protein S21 BCJMU02_4182 PF04055 Radical SAM superfamily BCJMU02_4182 PF01938 TRAM domain BCJMU02_4182 PF00919 Uncharacterized protein family UPF0004 BCJMU02_4183 PF04452 RNA methyltransferase BCJMU02_4185 PF00684 DnaJ central domain BCJMU02_4185 PF01556 DnaJ C terminal domain BCJMU02_4185 PF00226 DnaJ domain BCJMU02_4186 PF00012 Hsp70 protein BCJMU02_4187 PF01025 GrpE BCJMU02_4188 PF01628 HrcA protein C terminal domain BCJMU02_4189 PF06969 HemN C-terminal domain BCJMU02_4189 PF04055 Radical SAM superfamily BCJMU02_4190 PF01638 HxlR-like helix-turn-helix BCJMU02_4191 PF00679 Elongation factor G C-terminus BCJMU02_4191 PF00009 Elongation factor Tu GTP binding domain BCJMU02_4191 PF06421 GTP-binding protein LepA C-terminus BCJMU02_4191 PF03144 Elongation factor Tu domain 2 BCJMU02_4193 PF03418 Germination protease BCJMU02_4194 PF01649 Ribosomal protein S20 BCJMU02_4195 PF06144 DNA polymerase III, delta subunit BCJMU02_4196 PF14141 YqzM-like protein BCJMU02_4197 PF00753 Metallo-beta-lactamase superfamily BCJMU02_4197 PF13567 Domain of unknown function (DUF4131) BCJMU02_4197 PF03772 Competence protein BCJMU02_4198 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BCJMU02_4199 PF10531 SLBB domain BCJMU02_4200 PF14748 Pyrroline-5-carboxylate reductase dimerisation BCJMU02_4200 PF03807 NADP oxidoreductase coenzyme F420-dependent BCJMU02_4201 PF13649 Methyltransferase domain BCJMU02_4203 PF01966 HD domain BCJMU02_4204 PF01467 Cytidylyltransferase-like BCJMU02_4205 PF01985 CRS1 / YhbY (CRM) domain BCJMU02_4206 PF18317 Shikimate 5'-dehydrogenase C-terminal domain BCJMU02_4206 PF01488 Shikimate / quinate 5-dehydrogenase BCJMU02_4206 PF08501 Shikimate dehydrogenase substrate binding domain BCJMU02_4207 PF01926 50S ribosome-binding GTPase BCJMU02_4210 PF02666 Phosphatidylserine decarboxylase BCJMU02_4211 PF04542 Sigma-70 region 2 BCJMU02_4211 PF04545 Sigma-70, region 4 BCJMU02_4213 PF16244 Domain of unknown function (DUF4901) BCJMU02_4214 PF00471 Ribosomal protein L33 BCJMU02_4215 PF00881 Nitroreductase family BCJMU02_4216 PF04607 Region found in RelA / SpoT proteins BCJMU02_4218 PF00245 Alkaline phosphatase BCJMU02_4220 PF00561 alpha/beta hydrolase fold BCJMU02_4220 PF08386 TAP-like protein BCJMU02_4227 PF00082 Subtilase family BCJMU02_4227 PF02225 PA domain BCJMU02_4227 PF05922 Peptidase inhibitor I9 BCJMU02_4227 PF13860 FlgD Ig-like domain BCJMU02_4228 PF00351 Biopterin-dependent aromatic amino acid hydroxylase BCJMU02_4230 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BCJMU02_4231 PF07681 DoxX BCJMU02_4237 PF00005 ABC transporter BCJMU02_4238 PF01032 FecCD transport family BCJMU02_4239 PF01497 Periplasmic binding protein BCJMU02_4240 PF14143 YrhC-like protein BCJMU02_4241 PF00171 Aldehyde dehydrogenase family BCJMU02_4241 PF00465 Iron-containing alcohol dehydrogenase BCJMU02_4242 PF01053 Cys/Met metabolism PLP-dependent enzyme BCJMU02_4243 PF00291 Pyridoxal-phosphate dependent enzyme BCJMU02_4244 PF01048 Phosphorylase superfamily BCJMU02_4245 PF08241 Methyltransferase domain BCJMU02_4248 PF03717 Penicillin-binding Protein dimerisation domain BCJMU02_4248 PF00905 Penicillin binding protein transpeptidase domain BCJMU02_4249 PF01272 Transcription elongation factor, GreA/GreB, C-term BCJMU02_4249 PF03449 Transcription elongation factor, N-terminal BCJMU02_4250 PF00485 Phosphoribulokinase / Uridine kinase family BCJMU02_4251 PF01136 Peptidase family U32 BCJMU02_4251 PF16325 Peptidase family U32 C-terminal domain BCJMU02_4252 PF01136 Peptidase family U32 BCJMU02_4253 PF01596 O-methyltransferase BCJMU02_4254 PF02618 YceG-like family BCJMU02_4255 PF06949 Protein of unknown function (DUF1292) BCJMU02_4256 PF03652 Holliday junction resolvase BCJMU02_4257 PF06135 IreB regulatory phosphoprotein BCJMU02_4258 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BCJMU02_4258 PF01411 tRNA synthetases class II (A) BCJMU02_4258 PF02272 DHHA1 domain BCJMU02_4260 PF01594 AI-2E family transporter BCJMU02_4264 PF14490 Helix-hairpin-helix containing domain BCJMU02_4264 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain BCJMU02_4264 PF13538 UvrD-like helicase C-terminal domain BCJMU02_4267 PF00266 Aminotransferase class-V BCJMU02_4268 PF02082 Transcriptional regulator BCJMU02_4269 PF12002 MgsA AAA+ ATPase C terminal BCJMU02_4269 PF16193 AAA C-terminal domain BCJMU02_4269 PF05496 Holliday junction DNA helicase RuvB P-loop domain BCJMU02_4271 PF00899 ThiF family BCJMU02_4272 PF02938 GAD domain BCJMU02_4272 PF00152 tRNA synthetases class II (D, K and N) BCJMU02_4272 PF01336 OB-fold nucleic acid binding domain BCJMU02_4273 PF03129 Anticodon binding domain BCJMU02_4273 PF13393 Histidyl-tRNA synthetase BCJMU02_4275 PF02580 D-Tyr-tRNA(Tyr) deacylase BCJMU02_4276 PF13291 ACT domain BCJMU02_4276 PF04607 Region found in RelA / SpoT proteins BCJMU02_4276 PF02824 TGS domain BCJMU02_4277 PF00156 Phosphoribosyl transferase domain BCJMU02_4278 PF02272 DHHA1 domain BCJMU02_4278 PF01368 DHH family BCJMU02_4278 PF17768 RecJ OB domain BCJMU02_4278 PF10141 Single-strand DNA-specific exonuclease, C terminal domain BCJMU02_4279 PF01545 Cation efflux family BCJMU02_4279 PF16916 Dimerisation domain of Zinc Transporter BCJMU02_4280 PF02355 Protein export membrane protein BCJMU02_4280 PF07549 SecD/SecF GG Motif BCJMU02_4281 PF13797 Post-transcriptional regulator BCJMU02_4282 PF01943 Polysaccharide biosynthesis protein BCJMU02_4282 PF14667 Polysaccharide biosynthesis C-terminal domain BCJMU02_4283 PF04239 Protein of unknown function (DUF421) BCJMU02_4285 PF02699 Preprotein translocase subunit BCJMU02_4286 PF01702 Queuine tRNA-ribosyltransferase BCJMU02_4287 PF02547 Queuosine biosynthesis protein BCJMU02_4288 PF11146 Protein of unknown function (DUF2905) BCJMU02_4289 PF05491 RuvB C-terminal winged helix domain BCJMU02_4289 PF05496 Holliday junction DNA helicase RuvB P-loop domain BCJMU02_4289 PF17864 RuvB AAA lid domain BCJMU02_4290 PF07499 RuvA, C-terminal domain BCJMU02_4290 PF01330 RuvA N terminal domain BCJMU02_4291 PF01497 Periplasmic binding protein BCJMU02_4293 PF00892 EamA-like transporter family BCJMU02_4294 PF01022 Bacterial regulatory protein, arsR family BCJMU02_4298 PF01476 LysM domain BCJMU02_4299 PF02445 Quinolinate synthetase A protein BCJMU02_4300 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain BCJMU02_4300 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain BCJMU02_4301 PF02910 Fumarate reductase flavoprotein C-term BCJMU02_4301 PF00890 FAD binding domain BCJMU02_4302 PF00266 Aminotransferase class-V BCJMU02_4303 PF02829 3H domain BCJMU02_4303 PF08279 HTH domain BCJMU02_4304 PF03475 3-alpha domain BCJMU02_4304 PF03473 MOSC domain BCJMU02_4305 PF01842 ACT domain BCJMU02_4305 PF00800 Prephenate dehydratase BCJMU02_4306 PF02687 FtsX-like permease family BCJMU02_4307 PF02687 FtsX-like permease family BCJMU02_4308 PF00005 ABC transporter BCJMU02_4309 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCJMU02_4310 PF00486 Transcriptional regulatory protein, C terminal BCJMU02_4310 PF00072 Response regulator receiver domain BCJMU02_4311 PF01018 GTP1/OBG BCJMU02_4311 PF01926 50S ribosome-binding GTPase BCJMU02_4311 PF09269 Domain of unknown function (DUF1967) BCJMU02_4312 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain BCJMU02_4312 PF14682 Sporulation initiation phospho-transferase B, C-terminal BCJMU02_4313 PF01016 Ribosomal L27 protein BCJMU02_4314 PF04327 Cysteine protease Prp BCJMU02_4315 PF00829 Ribosomal prokaryotic L21 protein BCJMU02_4316 PF10150 Ribonuclease E/G family BCJMU02_4316 PF00575 S1 RNA binding domain BCJMU02_4317 PF02163 Peptidase family M50 BCJMU02_4318 PF01551 Peptidase family M23 BCJMU02_4319 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BCJMU02_4320 PF03775 Septum formation inhibitor MinC, C-terminal domain BCJMU02_4322 PF04085 rod shape-determining protein MreC BCJMU02_4324 PF04002 RadC-like JAB domain BCJMU02_4325 PF02545 Maf-like protein BCJMU02_4327 PF02875 Mur ligase family, glutamate ligase domain BCJMU02_4327 PF08245 Mur ligase middle domain BCJMU02_4328 PF08264 Anticodon-binding domain of tRNA BCJMU02_4328 PF00133 tRNA synthetases class I (I, L, M and V) BCJMU02_4328 PF10458 Valyl tRNA synthetase tRNA binding arm BCJMU02_4330 PF01476 LysM domain BCJMU02_4331 PF00202 Aminotransferase class-III BCJMU02_4332 PF00490 Delta-aminolevulinic acid dehydratase BCJMU02_4333 PF02602 Uroporphyrinogen-III synthase HemD BCJMU02_4334 PF03900 Porphobilinogen deaminase, C-terminal domain BCJMU02_4334 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain BCJMU02_4335 PF01578 Cytochrome C assembly protein BCJMU02_4336 PF01488 Shikimate / quinate 5-dehydrogenase BCJMU02_4336 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain BCJMU02_4336 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain BCJMU02_4337 PF01047 MarR family BCJMU02_4338 PF02566 OsmC-like protein BCJMU02_4339 PF01926 50S ribosome-binding GTPase BCJMU02_4340 PF00004 ATPase family associated with various cellular activities (AAA) BCJMU02_4340 PF05362 Lon protease (S16) C-terminal proteolytic domain BCJMU02_4340 PF02190 ATP-dependent protease La (LON) substrate-binding domain BCJMU02_4341 PF00004 ATPase family associated with various cellular activities (AAA) BCJMU02_4341 PF05362 Lon protease (S16) C-terminal proteolytic domain BCJMU02_4342 PF06689 ClpX C4-type zinc finger BCJMU02_4342 PF10431 C-terminal, D2-small domain, of ClpB protein BCJMU02_4342 PF07724 AAA domain (Cdc48 subfamily) BCJMU02_4343 PF05698 Bacterial trigger factor protein (TF) C-terminus BCJMU02_4343 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BCJMU02_4343 PF05697 Bacterial trigger factor protein (TF) BCJMU02_4347 PF11724 YvbH-like oligomerisation region BCJMU02_4347 PF08000 Bacterial PH domain BCJMU02_4349 PF12850 Calcineurin-like phosphoesterase superfamily domain BCJMU02_4350 PF01725 Ham1 family BCJMU02_4351 PF03725 3' exoribonuclease family, domain 2 BCJMU02_4351 PF01138 3' exoribonuclease family, domain 1 BCJMU02_4352 PF10646 Sporulation and spore germination BCJMU02_4353 PF01177 Asp/Glu/Hydantoin racemase BCJMU02_4354 PF07690 Major Facilitator Superfamily BCJMU02_4356 PF00440 Bacterial regulatory proteins, tetR family BCJMU02_4357 PF01965 DJ-1/PfpI family BCJMU02_4359 PF00196 Bacterial regulatory proteins, luxR family BCJMU02_4360 PF00860 Permease family BCJMU02_4362 PF07969 Amidohydrolase family BCJMU02_4363 PF07969 Amidohydrolase family BCJMU02_4364 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BCJMU02_4365 PF00528 Binding-protein-dependent transport system inner membrane component BCJMU02_4365 PF12911 N-terminal TM domain of oligopeptide transport permease C BCJMU02_4366 PF00528 Binding-protein-dependent transport system inner membrane component BCJMU02_4367 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BCJMU02_4367 PF00005 ABC transporter BCJMU02_4368 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BCJMU02_4368 PF00005 ABC transporter BCJMU02_4369 PF07694 5TMR of 5TMR-LYT BCJMU02_4369 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCJMU02_4369 PF06580 Histidine kinase BCJMU02_4370 PF04397 LytTr DNA-binding domain BCJMU02_4370 PF00072 Response regulator receiver domain BCJMU02_4372 PF04024 PspC domain BCJMU02_4373 PF07883 Cupin domain BCJMU02_4373 PF01381 Helix-turn-helix BCJMU02_4374 PF13536 Putative multidrug resistance efflux transporter BCJMU02_4375 PF00230 Major intrinsic protein BCJMU02_4376 PF02082 Transcriptional regulator BCJMU02_4378 PF00005 ABC transporter BCJMU02_4378 PF13732 Domain of unknown function (DUF4162) BCJMU02_4379 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) BCJMU02_4380 PF13677 Membrane MotB of proton-channel complex MotA/MotB BCJMU02_4380 PF00691 OmpA family BCJMU02_4381 PF01618 MotA/TolQ/ExbB proton channel family BCJMU02_4382 PF02557 D-alanyl-D-alanine carboxypeptidase BCJMU02_4383 PF03061 Thioesterase superfamily BCJMU02_4384 PF13085 2Fe-2S iron-sulfur cluster binding domain BCJMU02_4384 PF13183 4Fe-4S dicluster domain BCJMU02_4385 PF00890 FAD binding domain BCJMU02_4385 PF02910 Fumarate reductase flavoprotein C-term BCJMU02_4386 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit BCJMU02_4387 PF10702 Protein of unknown function (DUF2507) BCJMU02_4388 PF08459 UvrC Helix-hairpin-helix N-terminal BCJMU02_4388 PF02151 UvrB/uvrC motif BCJMU02_4388 PF01541 GIY-YIG catalytic domain BCJMU02_4389 PF00085 Thioredoxin BCJMU02_4390 PF01012 Electron transfer flavoprotein domain BCJMU02_4390 PF00766 Electron transfer flavoprotein FAD-binding domain BCJMU02_4391 PF01012 Electron transfer flavoprotein domain BCJMU02_4392 PF00378 Enoyl-CoA hydratase/isomerase BCJMU02_4393 PF00440 Bacterial regulatory proteins, tetR family BCJMU02_4393 PF08359 YsiA-like protein, C-terminal region BCJMU02_4394 PF13193 AMP-binding enzyme C-terminal domain BCJMU02_4394 PF00501 AMP-binding enzyme BCJMU02_4396 PF01497 Periplasmic binding protein BCJMU02_4397 PF01032 FecCD transport family BCJMU02_4398 PF05163 DinB family BCJMU02_4403 PF00005 ABC transporter BCJMU02_4404 PF00512 His Kinase A (phospho-acceptor) domain BCJMU02_4404 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCJMU02_4405 PF00486 Transcriptional regulatory protein, C terminal BCJMU02_4405 PF00072 Response regulator receiver domain BCJMU02_4407 PF09962 Uncharacterized conserved protein (DUF2196) BCJMU02_4408 PF10672 S-adenosylmethionine-dependent methyltransferase BCJMU02_4408 PF17785 PUA-like domain BCJMU02_4410 PF03992 Antibiotic biosynthesis monooxygenase BCJMU02_4411 PF04203 Sortase domain BCJMU02_4412 PF00005 ABC transporter BCJMU02_4413 PF01032 FecCD transport family BCJMU02_4414 PF01497 Periplasmic binding protein BCJMU02_4415 PF05031 Iron Transport-associated domain BCJMU02_4416 PF05031 Iron Transport-associated domain BCJMU02_4418 PF05525 Branched-chain amino acid transport protein BCJMU02_4419 PF01479 S4 domain BCJMU02_4419 PF00849 RNA pseudouridylate synthase BCJMU02_4420 PF00488 MutS domain V BCJMU02_4420 PF01713 Smr domain BCJMU02_4421 PF02811 PHP domain BCJMU02_4421 PF14791 DNA polymerase beta thumb BCJMU02_4421 PF14716 Helix-hairpin-helix domain BCJMU02_4422 PF02674 Colicin V production protein BCJMU02_4423 PF05164 Cell division protein ZapA BCJMU02_4424 PF01351 Ribonuclease HII BCJMU02_4424 PF11858 Domain of unknown function (DUF3378) BCJMU02_4428 PF00152 tRNA synthetases class II (D, K and N) BCJMU02_4428 PF01336 OB-fold nucleic acid binding domain BCJMU02_4429 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain BCJMU02_4429 PF01588 Putative tRNA binding domain BCJMU02_4429 PF03483 B3/4 domain BCJMU02_4429 PF03484 tRNA synthetase B5 domain BCJMU02_4429 PF03147 Ferredoxin-fold anticodon binding domain BCJMU02_4430 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain BCJMU02_4430 PF01409 tRNA synthetases class II core domain (F) BCJMU02_4431 PF08032 RNA 2'-O ribose methyltransferase substrate binding BCJMU02_4431 PF00588 SpoU rRNA Methylase family BCJMU02_4432 PF14098 Small, acid-soluble spore protein I BCJMU02_4433 PF01966 HD domain BCJMU02_4440 PF07690 Major Facilitator Superfamily BCJMU02_4442 PF00440 Bacterial regulatory proteins, tetR family BCJMU02_4442 PF16859 Tetracyclin repressor-like, C-terminal domain BCJMU02_4443 PF05343 M42 glutamyl aminopeptidase BCJMU02_4445 PF00453 Ribosomal protein L20 BCJMU02_4446 PF01632 Ribosomal protein L35 BCJMU02_4447 PF00707 Translation initiation factor IF-3, C-terminal domain BCJMU02_4447 PF05198 Translation initiation factor IF-3, N-terminal domain BCJMU02_4448 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BCJMU02_4448 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BCJMU02_4448 PF02824 TGS domain BCJMU02_4448 PF03129 Anticodon binding domain BCJMU02_4449 PF08812 YtxC-like family BCJMU02_4450 PF01695 IstB-like ATP binding protein BCJMU02_4450 PF07319 Primosomal protein DnaI N-terminus BCJMU02_4451 PF07261 Replication initiation and membrane attachment BCJMU02_4452 PF03477 ATP cone domain BCJMU02_4453 PF02675 S-adenosylmethionine decarboxylase BCJMU02_4454 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BCJMU02_4454 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BCJMU02_4455 PF01121 Dephospho-CoA kinase BCJMU02_4456 PF02659 Putative manganese efflux pump BCJMU02_4457 PF06827 Zinc finger found in FPG and IleRS BCJMU02_4457 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain BCJMU02_4457 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain BCJMU02_4458 PF00476 DNA polymerase family A BCJMU02_4458 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BCJMU02_4458 PF01367 5'-3' exonuclease, C-terminal SAM fold BCJMU02_4459 PF00512 His Kinase A (phospho-acceptor) domain BCJMU02_4459 PF00989 PAS fold BCJMU02_4459 PF16736 Single Cache-like BCJMU02_4459 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCJMU02_4460 PF00486 Transcriptional regulatory protein, C terminal BCJMU02_4460 PF00072 Response regulator receiver domain BCJMU02_4464 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BCJMU02_4464 PF00056 lactate/malate dehydrogenase, NAD binding domain BCJMU02_4465 PF00180 Isocitrate/isopropylmalate dehydrogenase BCJMU02_4466 PF00285 Citrate synthase, C-terminal domain BCJMU02_4467 PF04284 Protein of unknown function (DUF441) BCJMU02_4468 PF01594 AI-2E family transporter BCJMU02_4469 PF04186 FxsA cytoplasmic membrane protein BCJMU02_4470 PF02887 Pyruvate kinase, alpha/beta domain BCJMU02_4470 PF00224 Pyruvate kinase, barrel domain BCJMU02_4470 PF00391 PEP-utilising enzyme, mobile domain BCJMU02_4471 PF00365 Phosphofructokinase BCJMU02_4472 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit BCJMU02_4473 PF01039 Carboxyl transferase domain BCJMU02_4473 PF17848 Acetyl-coA carboxylase zinc finger domain BCJMU02_4474 PF00392 Bacterial regulatory proteins, gntR family BCJMU02_4475 PF00390 Malic enzyme, N-terminal domain BCJMU02_4475 PF03949 Malic enzyme, NAD binding domain BCJMU02_4476 PF07733 Bacterial DNA polymerase III alpha NTPase domain BCJMU02_4476 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BCJMU02_4476 PF14579 Helix-hairpin-helix motif BCJMU02_4476 PF02811 PHP domain BCJMU02_4476 PF01336 OB-fold nucleic acid binding domain BCJMU02_4477 PF14034 Sporulation protein YtrH BCJMU02_4479 PF02272 DHHA1 domain BCJMU02_4479 PF01368 DHH family BCJMU02_4480 PF14007 YtpI-like protein BCJMU02_4483 PF00392 Bacterial regulatory proteins, gntR family BCJMU02_4483 PF03061 Thioesterase superfamily BCJMU02_4483 PF00571 CBS domain BCJMU02_4483 PF07085 DRTGG domain BCJMU02_4486 PF00557 Metallopeptidase family M24 BCJMU02_4486 PF01321 Creatinase/Prolidase N-terminal domain BCJMU02_4493 PF07883 Cupin domain BCJMU02_4495 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BCJMU02_4495 PF05222 Alanine dehydrogenase/PNT, N-terminal domain BCJMU02_4497 PF00582 Universal stress protein family BCJMU02_4501 PF00206 Lyase BCJMU02_4501 PF14698 Argininosuccinate lyase C-terminal BCJMU02_4502 PF00764 Arginosuccinate synthase BCJMU02_4506 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BCJMU02_4506 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BCJMU02_4507 PF12787 EcsC protein family BCJMU02_4509 PF00871 Acetokinase family BCJMU02_4510 PF02384 N-6 DNA Methylase BCJMU02_4511 PF08534 Redoxin BCJMU02_4512 PF09579 Sporulation protein YtfJ (Spore_YtfJ) BCJMU02_4514 PF01513 ATP-NAD kinase BCJMU02_4515 PF07969 Amidohydrolase family BCJMU02_4517 PF00501 AMP-binding enzyme BCJMU02_4517 PF13193 AMP-binding enzyme C-terminal domain BCJMU02_4519 PF00269 Small, acid-soluble spore proteins, alpha/beta type BCJMU02_4520 PF02926 THUMP domain BCJMU02_4520 PF02568 Thiamine biosynthesis protein (ThiI) BCJMU02_4521 PF00266 Aminotransferase class-V BCJMU02_4522 PF06160 Septation ring formation regulator, EzrA BCJMU02_4523 PF03466 LysR substrate binding domain BCJMU02_4523 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BCJMU02_4524 PF00892 EamA-like transporter family BCJMU02_4525 PF00440 Bacterial regulatory proteins, tetR family BCJMU02_4526 PF13185 GAF domain BCJMU02_4527 PF01053 Cys/Met metabolism PLP-dependent enzyme BCJMU02_4528 PF01479 S4 domain BCJMU02_4528 PF00163 Ribosomal protein S4/S9 N-terminal domain BCJMU02_4531 PF00579 tRNA synthetases class I (W and Y) BCJMU02_4531 PF01479 S4 domain BCJMU02_4533 PF08281 Sigma-70, region 4 BCJMU02_4533 PF04542 Sigma-70 region 2 BCJMU02_4535 PF13193 AMP-binding enzyme C-terminal domain BCJMU02_4535 PF00501 AMP-binding enzyme BCJMU02_4536 PF00583 Acetyltransferase (GNAT) family BCJMU02_4537 PF00571 CBS domain BCJMU02_4538 PF00850 Histone deacetylase domain BCJMU02_4541 PF00072 Response regulator receiver domain BCJMU02_4541 PF00486 Transcriptional regulatory protein, C terminal BCJMU02_4542 PF00989 PAS fold BCJMU02_4542 PF00512 His Kinase A (phospho-acceptor) domain BCJMU02_4542 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCJMU02_4542 PF16736 Single Cache-like BCJMU02_4543 PF12796 Ankyrin repeats (3 copies) BCJMU02_4544 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BCJMU02_4545 PF01741 Large-conductance mechanosensitive channel, MscL BCJMU02_4550 PF00356 Bacterial regulatory proteins, lacI family BCJMU02_4551 PF07537 CamS sex pheromone cAM373 precursor BCJMU02_4552 PF11009 Protein of unknown function (DUF2847) BCJMU02_4554 PF02073 Thermophilic metalloprotease (M29) BCJMU02_4558 PF13302 Acetyltransferase (GNAT) domain BCJMU02_4559 PF03551 Transcriptional regulator PadR-like family BCJMU02_4561 PF08245 Mur ligase middle domain BCJMU02_4561 PF02875 Mur ligase family, glutamate ligase domain BCJMU02_4561 PF01225 Mur ligase family, catalytic domain BCJMU02_4563 PF01580 FtsK/SpoIIIE family BCJMU02_4563 PF09397 Ftsk gamma domain BCJMU02_4563 PF17854 FtsK alpha domain BCJMU02_4565 PF13276 HTH-like domain BCJMU02_4565 PF00665 Integrase core domain BCJMU02_4565 PF13333 Integrase core domain BCJMU02_4567 PF14794 Domain of unknown function (DUF4479) BCJMU02_4567 PF01588 Putative tRNA binding domain BCJMU02_4568 PF07285 Protein of unknown function (DUF1444) BCJMU02_4569 PF00085 Thioredoxin BCJMU02_4570 PF01931 Protein of unknown function DUF84 BCJMU02_4571 PF05343 M42 glutamyl aminopeptidase BCJMU02_4573 PF00753 Metallo-beta-lactamase superfamily BCJMU02_4574 PF02390 Putative methyltransferase BCJMU02_4575 PF14165 YtzH-like protein BCJMU02_4576 PF01636 Phosphotransferase enzyme family BCJMU02_4577 PF00128 Alpha amylase, catalytic domain BCJMU02_4577 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BCJMU02_4577 PF17999 Pullulanase N1-terminal domain BCJMU02_4578 PF02834 LigT like Phosphoesterase BCJMU02_4579 PF01546 Peptidase family M20/M25/M40 BCJMU02_4580 PF08220 DeoR-like helix-turn-helix domain BCJMU02_4581 PF00849 RNA pseudouridylate synthase BCJMU02_4581 PF01479 S4 domain BCJMU02_4582 PF14667 Polysaccharide biosynthesis C-terminal domain BCJMU02_4582 PF01943 Polysaccharide biosynthesis protein BCJMU02_4584 PF07690 Major Facilitator Superfamily BCJMU02_4585 PF01022 Bacterial regulatory protein, arsR family BCJMU02_4586 PF08327 Activator of Hsp90 ATPase homolog 1-like protein BCJMU02_4588 PF10957 Sporulation protein Cse60 BCJMU02_4590 PF02559 CarD-like/TRCF domain BCJMU02_4592 PF06800 Sugar transport protein BCJMU02_4595 PF02391 MoaE protein BCJMU02_4596 PF03205 Molybdopterin guanine dinucleotide synthesis protein B BCJMU02_4597 PF03453 MoeA N-terminal region (domain I and II) BCJMU02_4597 PF00994 Probable molybdopterin binding domain BCJMU02_4597 PF03454 MoeA C-terminal region (domain IV) BCJMU02_4598 PF01967 MoaC family BCJMU02_4599 PF00899 ThiF family BCJMU02_4600 PF06463 Molybdenum Cofactor Synthesis C BCJMU02_4600 PF04055 Radical SAM superfamily BCJMU02_4604 PF00581 Rhodanese-like domain BCJMU02_4606 PF00561 alpha/beta hydrolase fold BCJMU02_4607 PF03323 Bacillus/Clostridium GerA spore germination protein BCJMU02_4608 PF03845 Spore germination protein BCJMU02_4614 PF00133 tRNA synthetases class I (I, L, M and V) BCJMU02_4614 PF09334 tRNA synthetases class I (M) BCJMU02_4614 PF13603 Leucyl-tRNA synthetase, Domain 2 BCJMU02_4614 PF08264 Anticodon-binding domain of tRNA BCJMU02_4615 PF07690 Major Facilitator Superfamily BCJMU02_4616 PF00999 Sodium/hydrogen exchanger family BCJMU02_4617 PF02080 TrkA-C domain BCJMU02_4618 PF00589 Phage integrase family BCJMU02_4620 PF00005 ABC transporter BCJMU02_4621 PF07786 Protein of unknown function (DUF1624) BCJMU02_4621 PF04235 Protein of unknown function (DUF418) BCJMU02_4623 PF10732 Protein of unknown function (DUF2524) BCJMU02_4624 PF16199 Radical_SAM C-terminal domain BCJMU02_4624 PF04055 Radical SAM superfamily BCJMU02_4625 PF06962 Putative rRNA methylase BCJMU02_4626 PF00005 ABC transporter BCJMU02_4628 PF01177 Asp/Glu/Hydantoin racemase BCJMU02_4630 PF10026 Predicted Zn-dependent protease (DUF2268) BCJMU02_4634 PF10776 Protein of unknown function (DUF2600) BCJMU02_4635 PF12146 Serine aminopeptidase, S33 BCJMU02_4636 PF00132 Bacterial transferase hexapeptide (six repeats) BCJMU02_4637 PF01569 PAP2 superfamily BCJMU02_4638 PF13439 Glycosyltransferase Family 4 BCJMU02_4638 PF00534 Glycosyl transferases group 1 BCJMU02_4639 PF12804 MobA-like NTP transferase domain BCJMU02_4640 PF00994 Probable molybdopterin binding domain BCJMU02_4644 PF00438 S-adenosylmethionine synthetase, N-terminal domain BCJMU02_4644 PF02773 S-adenosylmethionine synthetase, C-terminal domain BCJMU02_4644 PF02772 S-adenosylmethionine synthetase, central domain BCJMU02_4645 PF01293 Phosphoenolpyruvate carboxykinase BCJMU02_4652 PF01784 NIF3 (NGG1p interacting factor 3) BCJMU02_4653 PF00989 PAS fold BCJMU02_4653 PF00512 His Kinase A (phospho-acceptor) domain BCJMU02_4653 PF13426 PAS domain BCJMU02_4653 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCJMU02_4653 PF13188 PAS domain BCJMU02_4654 PF00989 PAS fold BCJMU02_4654 PF00512 His Kinase A (phospho-acceptor) domain BCJMU02_4654 PF08447 PAS fold BCJMU02_4654 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCJMU02_4655 PF08386 TAP-like protein BCJMU02_4655 PF00561 alpha/beta hydrolase fold BCJMU02_4656 PF00884 Sulfatase BCJMU02_4660 PF00005 ABC transporter BCJMU02_4661 PF00528 Binding-protein-dependent transport system inner membrane component BCJMU02_4664 PF13419 Haloacid dehalogenase-like hydrolase BCJMU02_4666 PF00293 NUDIX domain BCJMU02_4672 PF02664 S-Ribosylhomocysteinase (LuxS) BCJMU02_4673 PF01809 Putative membrane protein insertion efficiency factor BCJMU02_4674 PF00484 Carbonic anhydrase BCJMU02_4675 PF01654 Cytochrome bd terminal oxidase subunit I BCJMU02_4676 PF02322 Cytochrome bd terminal oxidase subunit II BCJMU02_4677 PF10676 Spore germination protein gerPA/gerPF BCJMU02_4680 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BCJMU02_4680 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BCJMU02_4685 PF04012 PspA/IM30 family BCJMU02_4690 PF07670 Nucleoside recognition BCJMU02_4690 PF17910 FeoB cytosolic helical domain BCJMU02_4690 PF07664 Ferrous iron transport protein B C terminus BCJMU02_4690 PF02421 Ferrous iron transport protein B BCJMU02_4692 PF09515 Thiamine transporter protein (Thia_YuaJ) BCJMU02_4693 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCJMU02_4693 PF00672 HAMP domain BCJMU02_4693 PF00512 His Kinase A (phospho-acceptor) domain BCJMU02_4695 PF00072 Response regulator receiver domain BCJMU02_4695 PF00486 Transcriptional regulatory protein, C terminal BCJMU02_4700 PF00156 Phosphoribosyl transferase domain BCJMU02_4701 PF00781 Diacylglycerol kinase catalytic domain BCJMU02_4705 PF02687 FtsX-like permease family BCJMU02_4706 PF00005 ABC transporter BCJMU02_4711 PF09335 SNARE associated Golgi protein BCJMU02_4712 PF00398 Ribosomal RNA adenine dimethylase BCJMU02_4713 PF02311 AraC-like ligand binding domain BCJMU02_4713 PF12833 Helix-turn-helix domain BCJMU02_4715 PF02687 FtsX-like permease family BCJMU02_4716 PF00005 ABC transporter BCJMU02_4717 PF12833 Helix-turn-helix domain BCJMU02_4717 PF06445 GyrI-like small molecule binding domain BCJMU02_4719 PF04542 Sigma-70 region 2 BCJMU02_4719 PF08281 Sigma-70, region 4 BCJMU02_4720 PF00486 Transcriptional regulatory protein, C terminal BCJMU02_4720 PF00072 Response regulator receiver domain BCJMU02_4721 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCJMU02_4722 PF02687 FtsX-like permease family BCJMU02_4723 PF02687 FtsX-like permease family BCJMU02_4724 PF00005 ABC transporter BCJMU02_4725 PF02687 FtsX-like permease family BCJMU02_4727 PF02447 GntP family permease BCJMU02_4728 PF00392 Bacterial regulatory proteins, gntR family BCJMU02_4728 PF07702 UTRA domain BCJMU02_4730 PF07071 KDGP aldolase BCJMU02_4731 PF03841 L-seryl-tRNA selenium transferase BCJMU02_4732 PF01979 Amidohydrolase family BCJMU02_4733 PF02557 D-alanyl-D-alanine carboxypeptidase BCJMU02_4734 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCJMU02_4734 PF00512 His Kinase A (phospho-acceptor) domain BCJMU02_4735 PF00072 Response regulator receiver domain BCJMU02_4735 PF00486 Transcriptional regulatory protein, C terminal BCJMU02_4736 PF13378 Enolase C-terminal domain-like BCJMU02_4736 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BCJMU02_4737 PF13193 AMP-binding enzyme C-terminal domain BCJMU02_4737 PF00501 AMP-binding enzyme BCJMU02_4738 PF00378 Enoyl-CoA hydratase/isomerase BCJMU02_4739 PF00561 alpha/beta hydrolase fold BCJMU02_4740 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BCJMU02_4740 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BCJMU02_4740 PF16582 Middle domain of thiamine pyrophosphate BCJMU02_4741 PF00425 chorismate binding enzyme BCJMU02_4742 PF01040 UbiA prenyltransferase family BCJMU02_4743 PF01258 Prokaryotic dksA/traR C4-type zinc finger BCJMU02_4744 PF00313 'Cold-shock' DNA-binding domain BCJMU02_4747 PF00343 Carbohydrate phosphorylase BCJMU02_4748 PF00534 Glycosyl transferases group 1 BCJMU02_4748 PF08323 Starch synthase catalytic domain BCJMU02_4749 PF00483 Nucleotidyl transferase BCJMU02_4750 PF00483 Nucleotidyl transferase BCJMU02_4751 PF00128 Alpha amylase, catalytic domain BCJMU02_4751 PF02806 Alpha amylase, C-terminal all-beta domain BCJMU02_4751 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BCJMU02_4753 PF13860 FlgD Ig-like domain BCJMU02_4753 PF05922 Peptidase inhibitor I9 BCJMU02_4753 PF00082 Subtilase family BCJMU02_4753 PF02225 PA domain BCJMU02_4754 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BCJMU02_4754 PF00056 lactate/malate dehydrogenase, NAD binding domain BCJMU02_4755 PF02308 MgtC family BCJMU02_4756 PF02254 TrkA-N domain BCJMU02_4756 PF07885 Ion channel BCJMU02_4757 PF08868 YugN-like family BCJMU02_4758 PF00342 Phosphoglucose isomerase BCJMU02_4759 PF04070 Domain of unknown function (DUF378) BCJMU02_4760 PF00575 S1 RNA binding domain BCJMU02_4761 PF00155 Aminotransferase class I and II BCJMU02_4762 PF01037 Lrp/AsnC ligand binding domain BCJMU02_4763 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BCJMU02_4763 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BCJMU02_4764 PF00561 alpha/beta hydrolase fold BCJMU02_4764 PF08386 TAP-like protein BCJMU02_4766 PF00155 Aminotransferase class I and II BCJMU02_4769 PF08810 Kinase associated protein B BCJMU02_4770 PF00929 Exonuclease BCJMU02_4771 PF03600 Citrate transporter BCJMU02_4774 PF03129 Anticodon binding domain BCJMU02_4774 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BCJMU02_4775 PF03061 Thioesterase superfamily BCJMU02_4777 PF02632 BioY family BCJMU02_4778 PF00483 Nucleotidyl transferase BCJMU02_4779 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BCJMU02_4779 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BCJMU02_4779 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BCJMU02_4779 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BCJMU02_4780 PF10372 Bacterial membrane-spanning protein N-terminus BCJMU02_4780 PF02457 DisA bacterial checkpoint controller nucleotide-binding BCJMU02_4781 PF02789 Cytosol aminopeptidase family, N-terminal domain BCJMU02_4781 PF00883 Cytosol aminopeptidase family, catalytic domain BCJMU02_4782 PF06725 3D domain BCJMU02_4784 PF00293 NUDIX domain BCJMU02_4784 PF13344 Haloacid dehalogenase-like hydrolase BCJMU02_4785 PF07992 Pyridine nucleotide-disulphide oxidoreductase BCJMU02_4786 PF07992 Pyridine nucleotide-disulphide oxidoreductase BCJMU02_4788 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) BCJMU02_4791 PF06445 GyrI-like small molecule binding domain BCJMU02_4794 PF04463 Protein of unknown function (DUF523) BCJMU02_4796 PF01521 Iron-sulphur cluster biosynthesis BCJMU02_4797 PF01678 Diaminopimelate epimerase BCJMU02_4798 PF07293 Protein of unknown function (DUF1450) BCJMU02_4799 PF07992 Pyridine nucleotide-disulphide oxidoreductase BCJMU02_4800 PF03412 Peptidase C39 family BCJMU02_4800 PF00005 ABC transporter BCJMU02_4800 PF00664 ABC transporter transmembrane region BCJMU02_4801 PF03649 Uncharacterised protein family (UPF0014) BCJMU02_4802 PF03831 PhnA domain BCJMU02_4802 PF08274 PhnA Zinc-Ribbon BCJMU02_4805 PF01909 Nucleotidyltransferase domain BCJMU02_4805 PF13427 Domain of unknown function (DUF4111) BCJMU02_4806 PF07315 Protein of unknown function (DUF1462) BCJMU02_4807 PF01106 NifU-like domain BCJMU02_4811 PF04608 Phosphatidylglycerophosphatase A BCJMU02_4814 PF12704 MacB-like periplasmic core domain BCJMU02_4814 PF02687 FtsX-like permease family BCJMU02_4814 PF00005 ABC transporter BCJMU02_4815 PF02525 Flavodoxin-like fold BCJMU02_4816 PF13344 Haloacid dehalogenase-like hydrolase BCJMU02_4818 PF01934 Protein of unknown function DUF86 BCJMU02_4819 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded BCJMU02_4822 PF06265 Protein of unknown function (DUF1027) BCJMU02_4823 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) BCJMU02_4824 PF13411 MerR HTH family regulatory protein BCJMU02_4824 PF07739 TipAS antibiotic-recognition domain BCJMU02_4825 PF10086 YhfC intramembrane metalloprotease BCJMU02_4829 PF04055 Radical SAM superfamily BCJMU02_4829 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family BCJMU02_4830 PF01551 Peptidase family M23 BCJMU02_4832 PF08827 Domain of unknown function (DUF1805) BCJMU02_4833 PF02872 5'-nucleotidase, C-terminal domain BCJMU02_4834 PF03551 Transcriptional regulator PadR-like family BCJMU02_4835 PF04892 VanZ like family BCJMU02_4836 PF01458 Uncharacterized protein family (UPF0051) BCJMU02_4837 PF01592 NifU-like N terminal domain BCJMU02_4838 PF00266 Aminotransferase class-V BCJMU02_4839 PF01458 Uncharacterized protein family (UPF0051) BCJMU02_4840 PF00005 ABC transporter BCJMU02_4841 PF03180 NLPA lipoprotein BCJMU02_4842 PF03180 NLPA lipoprotein BCJMU02_4843 PF00528 Binding-protein-dependent transport system inner membrane component BCJMU02_4844 PF09383 NIL domain BCJMU02_4844 PF00005 ABC transporter BCJMU02_4846 PF00085 Thioredoxin BCJMU02_4847 PF01751 Toprim domain BCJMU02_4848 PF01597 Glycine cleavage H-protein BCJMU02_4849 PF03960 ArsC family BCJMU02_4858 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BCJMU02_4858 PF00056 lactate/malate dehydrogenase, NAD binding domain BCJMU02_4864 PF00440 Bacterial regulatory proteins, tetR family BCJMU02_4864 PF13305 Tetracyclin repressor-like, C-terminal domain BCJMU02_4865 PF00753 Metallo-beta-lactamase superfamily BCJMU02_4869 PF00005 ABC transporter BCJMU02_4877 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BCJMU02_4877 PF02770 Acyl-CoA dehydrogenase, middle domain BCJMU02_4877 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BCJMU02_4878 PF00108 Thiolase, N-terminal domain BCJMU02_4878 PF02803 Thiolase, C-terminal domain BCJMU02_4879 PF00378 Enoyl-CoA hydratase/isomerase BCJMU02_4879 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BCJMU02_4879 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BCJMU02_4880 PF14115 YuzL-like protein BCJMU02_4881 PF07943 Penicillin-binding protein 5, C-terminal domain BCJMU02_4881 PF00768 D-alanyl-D-alanine carboxypeptidase BCJMU02_4882 PF01619 Proline dehydrogenase BCJMU02_4883 PF10835 Protein of unknown function (DUF2573) BCJMU02_4884 PF01910 Thiamine-binding protein BCJMU02_4885 PF00672 HAMP domain BCJMU02_4885 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BCJMU02_4885 PF02743 Cache domain BCJMU02_4889 PF07690 Major Facilitator Superfamily BCJMU02_4890 PF13520 Amino acid permease BCJMU02_4893 PF02096 60Kd inner membrane protein BCJMU02_4895 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BCJMU02_4895 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BCJMU02_4902 PF09335 SNARE associated Golgi protein BCJMU02_4904 PF03734 L,D-transpeptidase catalytic domain BCJMU02_4904 PF17969 L,D-transpeptidase C-terminal domain BCJMU02_4905 PF00486 Transcriptional regulatory protein, C terminal BCJMU02_4905 PF00072 Response regulator receiver domain BCJMU02_4906 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCJMU02_4906 PF00512 His Kinase A (phospho-acceptor) domain BCJMU02_4906 PF00989 PAS fold BCJMU02_4906 PF16736 Single Cache-like BCJMU02_4908 PF08264 Anticodon-binding domain of tRNA BCJMU02_4908 PF09334 tRNA synthetases class I (M) BCJMU02_4910 PF00672 HAMP domain BCJMU02_4910 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BCJMU02_4910 PF02743 Cache domain BCJMU02_4911 PF00672 HAMP domain BCJMU02_4911 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BCJMU02_4911 PF02743 Cache domain BCJMU02_4912 PF01883 Iron-sulfur cluster assembly protein BCJMU02_4913 PF03413 Peptidase propeptide and YPEB domain BCJMU02_4913 PF01447 Thermolysin metallopeptidase, catalytic domain BCJMU02_4913 PF02868 Thermolysin metallopeptidase, alpha-helical domain BCJMU02_4913 PF07504 Fungalysin/Thermolysin Propeptide Motif BCJMU02_4914 PF17954 Quercetinase C-terminal cupin domain BCJMU02_4914 PF02678 Pirin BCJMU02_4915 PF01047 MarR family BCJMU02_4917 PF00999 Sodium/hydrogen exchanger family BCJMU02_4918 PF02080 TrkA-C domain BCJMU02_4920 PF01235 Sodium:alanine symporter family BCJMU02_4922 PF00210 Ferritin-like domain BCJMU02_4925 PF03641 Possible lysine decarboxylase BCJMU02_4927 PF00210 Ferritin-like domain BCJMU02_4929 PF01773 Na+ dependent nucleoside transporter N-terminus BCJMU02_4929 PF07662 Na+ dependent nucleoside transporter C-terminus BCJMU02_4930 PF01773 Na+ dependent nucleoside transporter N-terminus BCJMU02_4930 PF07662 Na+ dependent nucleoside transporter C-terminus BCJMU02_4931 PF01235 Sodium:alanine symporter family BCJMU02_4932 PF01235 Sodium:alanine symporter family BCJMU02_4933 PF13460 NAD(P)H-binding BCJMU02_4937 PF00248 Aldo/keto reductase family BCJMU02_4938 PF07690 Major Facilitator Superfamily BCJMU02_4939 PF01638 HxlR-like helix-turn-helix BCJMU02_4940 PF07849 Protein of unknown function (DUF1641) BCJMU02_4941 PF07992 Pyridine nucleotide-disulphide oxidoreductase BCJMU02_4942 PF01479 S4 domain BCJMU02_4942 PF00579 tRNA synthetases class I (W and Y) BCJMU02_4943 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain BCJMU02_4943 PF01565 FAD binding domain BCJMU02_4945 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BCJMU02_4945 PF00672 HAMP domain BCJMU02_4945 PF17202 Single cache domain 3 BCJMU02_4947 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BCJMU02_4948 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BCJMU02_4951 PF07690 Major Facilitator Superfamily BCJMU02_4952 PF00005 ABC transporter BCJMU02_4952 PF12848 ABC transporter BCJMU02_4953 PF13302 Acetyltransferase (GNAT) domain BCJMU02_4955 PF07690 Major Facilitator Superfamily BCJMU02_4956 PF07457 Protein of unknown function (DUF1516) BCJMU02_4957 PF06146 Phosphate-starvation-inducible E BCJMU02_4959 PF00005 ABC transporter BCJMU02_4960 PF01032 FecCD transport family BCJMU02_4961 PF01032 FecCD transport family BCJMU02_4963 PF00072 Response regulator receiver domain BCJMU02_4963 PF00486 Transcriptional regulatory protein, C terminal BCJMU02_4964 PF01668 SmpB protein BCJMU02_4965 PF00575 S1 RNA binding domain BCJMU02_4965 PF00773 RNB domain BCJMU02_4965 PF08206 Ribonuclease B OB domain BCJMU02_4965 PF17876 Cold shock domain BCJMU02_4966 PF12146 Serine aminopeptidase, S33 BCJMU02_4967 PF03840 Preprotein translocase SecG subunit BCJMU02_4968 PF04172 LrgB-like family BCJMU02_4969 PF03788 LrgA family BCJMU02_4970 PF01156 Inosine-uridine preferring nucleoside hydrolase BCJMU02_4973 PF00239 Resolvase, N terminal domain BCJMU02_4973 PF02796 Helix-turn-helix domain of resolvase BCJMU02_4978 PF02899 Phage integrase, N-terminal SAM-like domain BCJMU02_4978 PF00589 Phage integrase family BCJMU02_4979 PF00113 Enolase, C-terminal TIM barrel domain BCJMU02_4979 PF03952 Enolase, N-terminal domain BCJMU02_4980 PF01676 Metalloenzyme superfamily BCJMU02_4980 PF06415 BPG-independent PGAM N-terminus (iPGM_N) BCJMU02_4981 PF00121 Triosephosphate isomerase BCJMU02_4982 PF00162 Phosphoglycerate kinase BCJMU02_4983 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BCJMU02_4983 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BCJMU02_4984 PF04198 Putative sugar-binding domain BCJMU02_4986 PF04552 Sigma-54, DNA binding domain BCJMU02_4986 PF04963 Sigma-54 factor, core binding domain BCJMU02_4986 PF00309 Sigma-54 factor, Activator interacting domain (AID) BCJMU02_4989 PF03862 SpoVAC/SpoVAEB sporulation membrane protein BCJMU02_4990 PF07451 Stage V sporulation protein AD (SpoVAD) BCJMU02_4991 PF03862 SpoVAC/SpoVAEB sporulation membrane protein BCJMU02_4993 PF04239 Protein of unknown function (DUF421) BCJMU02_4994 PF00574 Clp protease BCJMU02_4995 PF00381 PTS HPr component phosphorylation site BCJMU02_4996 PF10298 WhiA N-terminal LAGLIDADG-like domain BCJMU02_4996 PF14527 WhiA LAGLIDADG-like domain BCJMU02_4996 PF02650 WhiA C-terminal HTH domain BCJMU02_4997 PF01933 Uncharacterised protein family UPF0052 BCJMU02_4998 PF03668 P-loop ATPase protein family BCJMU02_4999 PF00293 NUDIX domain BCJMU02_5001 PF07992 Pyridine nucleotide-disulphide oxidoreductase BCJMU02_5003 PF14602 Hexapeptide repeat of succinyl-transferase BCJMU02_5004 PF13419 Haloacid dehalogenase-like hydrolase BCJMU02_5005 PF01790 Prolipoprotein diacylglyceryl transferase BCJMU02_5006 PF07475 HPr Serine kinase C-terminal domain BCJMU02_5006 PF02603 HPr Serine kinase N terminus BCJMU02_5007 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV BCJMU02_5009 PF00005 ABC transporter BCJMU02_5009 PF17755 UvrA DNA-binding domain BCJMU02_5009 PF17760 UvrA interaction domain BCJMU02_5010 PF17757 UvrB interaction domain BCJMU02_5010 PF12344 Ultra-violet resistance protein B BCJMU02_5010 PF02151 UvrB/uvrC motif BCJMU02_5010 PF04851 Type III restriction enzyme, res subunit BCJMU02_5010 PF00271 Helicase conserved C-terminal domain BCJMU02_5013 PF13411 MerR HTH family regulatory protein BCJMU02_5013 PF07739 TipAS antibiotic-recognition domain BCJMU02_5018 PF03601 Conserved hypothetical protein 698 BCJMU02_5019 PF03466 LysR substrate binding domain BCJMU02_5019 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BCJMU02_5020 PF00376 MerR family regulatory protein BCJMU02_5020 PF09278 MerR, DNA binding BCJMU02_5021 PF03358 NADPH-dependent FMN reductase BCJMU02_5022 PF00005 ABC transporter BCJMU02_5022 PF12848 ABC transporter BCJMU02_5022 PF16326 ABC transporter C-terminal domain BCJMU02_5023 PF01906 Putative heavy-metal-binding BCJMU02_5024 PF00664 ABC transporter transmembrane region BCJMU02_5024 PF00005 ABC transporter BCJMU02_5026 PF17820 PDZ domain BCJMU02_5027 PF17820 PDZ domain BCJMU02_5027 PF01471 Putative peptidoglycan binding domain BCJMU02_5027 PF03572 Peptidase family S41 BCJMU02_5028 PF18075 FtsX extracellular domain BCJMU02_5028 PF02687 FtsX-like permease family BCJMU02_5029 PF00005 ABC transporter BCJMU02_5030 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BCJMU02_5031 PF00472 RF-1 domain BCJMU02_5031 PF03462 PCRF domain BCJMU02_5032 PF07516 SecA Wing and Scaffold domain BCJMU02_5032 PF01043 SecA preprotein cross-linking domain BCJMU02_5032 PF07517 SecA DEAD-like domain BCJMU02_5032 PF02810 SEC-C motif BCJMU02_5033 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein BCJMU02_5033 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus BCJMU02_5034 PF00313 'Cold-shock' DNA-binding domain BCJMU02_5036 PF04851 Type III restriction enzyme, res subunit BCJMU02_5036 PF00271 Helicase conserved C-terminal domain BCJMU02_5037 PF00877 NlpC/P60 family BCJMU02_5037 PF01476 LysM domain BCJMU02_5038 PF01638 HxlR-like helix-turn-helix BCJMU02_5039 PF02645 Uncharacterised protein, DegV family COG1307 BCJMU02_5040 PF01205 Uncharacterized protein family UPF0029 BCJMU02_5040 PF09186 Domain of unknown function (DUF1949) BCJMU02_5041 PF03816 Cell envelope-related transcriptional attenuator domain BCJMU02_5042 PF02350 UDP-N-acetylglucosamine 2-epimerase BCJMU02_5043 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BCJMU02_5043 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BCJMU02_5043 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BCJMU02_5044 PF00953 Glycosyl transferase family 4 BCJMU02_5045 PF01522 Polysaccharide deacetylase BCJMU02_5046 PF03610 PTS system fructose IIA component BCJMU02_5046 PF00158 Sigma-54 interaction domain BCJMU02_5046 PF00874 PRD domain BCJMU02_5048 PF02417 Chromate transporter BCJMU02_5049 PF04794 YdjC-like protein BCJMU02_5050 PF11975 Family 4 glycosyl hydrolase C-terminal domain BCJMU02_5050 PF02056 Family 4 glycosyl hydrolase BCJMU02_5051 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit BCJMU02_5052 PF02378 Phosphotransferase system, EIIC BCJMU02_5053 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BCJMU02_5055 PF02675 S-adenosylmethionine decarboxylase BCJMU02_5058 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit BCJMU02_5059 PF02378 Phosphotransferase system, EIIC BCJMU02_5060 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BCJMU02_5061 PF00375 Sodium:dicarboxylate symporter family BCJMU02_5063 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BCJMU02_5068 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BCJMU02_5068 PF03466 LysR substrate binding domain BCJMU02_5071 PF01654 Cytochrome bd terminal oxidase subunit I BCJMU02_5072 PF02322 Cytochrome bd terminal oxidase subunit II BCJMU02_5073 PF02040 Arsenical pump membrane protein BCJMU02_5074 PF01964 Radical SAM ThiC family BCJMU02_5074 PF13667 ThiC-associated domain BCJMU02_5075 PF02652 L-lactate permease BCJMU02_5076 PF07282 Putative transposase DNA-binding domain BCJMU02_5076 PF01385 Probable transposase BCJMU02_5076 PF12323 Helix-turn-helix domain BCJMU02_5078 PF09988 Uncharacterized metal-binding protein (DUF2227) BCJMU02_5081 PF00884 Sulfatase BCJMU02_5082 PF01063 Amino-transferase class IV BCJMU02_5083 PF00877 NlpC/P60 family BCJMU02_5083 PF01476 LysM domain BCJMU02_5084 PF07662 Na+ dependent nucleoside transporter C-terminus BCJMU02_5084 PF01773 Na+ dependent nucleoside transporter N-terminus BCJMU02_5088 PF02028 BCCT, betaine/carnitine/choline family transporter BCJMU02_5089 PF06725 3D domain BCJMU02_5089 PF01476 LysM domain BCJMU02_5094 PF04434 SWIM zinc finger BCJMU02_5095 PF12419 SNF2 Helicase protein BCJMU02_5095 PF00271 Helicase conserved C-terminal domain BCJMU02_5095 PF00176 SNF2 family N-terminal domain BCJMU02_5102 PF04542 Sigma-70 region 2 BCJMU02_5102 PF04545 Sigma-70, region 4 BCJMU02_5103 PF04893 Yip1 domain BCJMU02_5104 PF04893 Yip1 domain BCJMU02_5105 PF12704 MacB-like periplasmic core domain BCJMU02_5105 PF02687 FtsX-like permease family BCJMU02_5106 PF00005 ABC transporter BCJMU02_5110 PF07690 Major Facilitator Superfamily BCJMU02_5113 PF18719 ArlS sensor domain BCJMU02_5113 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCJMU02_5113 PF00512 His Kinase A (phospho-acceptor) domain BCJMU02_5114 PF00072 Response regulator receiver domain BCJMU02_5114 PF00486 Transcriptional regulatory protein, C terminal BCJMU02_5115 PF16363 GDP-mannose 4,6 dehydratase BCJMU02_5116 PF03816 Cell envelope-related transcriptional attenuator domain BCJMU02_5117 PF07977 FabA-like domain BCJMU02_5119 PF00483 Nucleotidyl transferase BCJMU02_5120 PF00005 ABC transporter BCJMU02_5120 PF08239 Bacterial SH3 domain BCJMU02_5121 PF01061 ABC-2 type transporter BCJMU02_5122 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase BCJMU02_5123 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus BCJMU02_5123 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus BCJMU02_5124 PF00534 Glycosyl transferases group 1 BCJMU02_5125 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase BCJMU02_5126 PF00535 Glycosyl transferase family 2 BCJMU02_5126 PF01501 Glycosyl transferase family 8 BCJMU02_5127 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase BCJMU02_5128 PF01467 Cytidylyltransferase-like BCJMU02_5130 PF12116 Stage III sporulation protein D BCJMU02_5132 PF01551 Peptidase family M23 BCJMU02_5134 PF00005 ABC transporter BCJMU02_5135 PF00072 Response regulator receiver domain BCJMU02_5135 PF04397 LytTr DNA-binding domain BCJMU02_5136 PF08486 Stage II sporulation protein BCJMU02_5137 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BCJMU02_5139 PF06612 Protein of unknown function (DUF1146) BCJMU02_5140 PF00361 Proton-conducting membrane transporter BCJMU02_5141 PF00361 Proton-conducting membrane transporter BCJMU02_5142 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus BCJMU02_5142 PF00361 Proton-conducting membrane transporter BCJMU02_5142 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BCJMU02_5143 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L BCJMU02_5144 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 BCJMU02_5146 PF00146 NADH dehydrogenase BCJMU02_5147 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit BCJMU02_5148 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit BCJMU02_5149 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit BCJMU02_5150 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 BCJMU02_5152 PF03707 Bacterial signalling protein N terminal repeat BCJMU02_5152 PF00563 EAL domain BCJMU02_5152 PF00990 Diguanylate cyclase, GGDEF domain BCJMU02_5155 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain BCJMU02_5155 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain BCJMU02_5156 PF02874 ATP synthase alpha/beta family, beta-barrel domain BCJMU02_5156 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BCJMU02_5157 PF00231 ATP synthase BCJMU02_5158 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BCJMU02_5158 PF00306 ATP synthase alpha/beta chain, C terminal domain BCJMU02_5158 PF02874 ATP synthase alpha/beta family, beta-barrel domain BCJMU02_5159 PF00213 ATP synthase delta (OSCP) subunit BCJMU02_5160 PF00430 ATP synthase B/B' CF(0) BCJMU02_5161 PF00137 ATP synthase subunit C BCJMU02_5162 PF00119 ATP synthase A chain BCJMU02_5163 PF03899 ATP synthase I chain BCJMU02_5166 PF00464 Serine hydroxymethyltransferase BCJMU02_5167 PF04260 Protein of unknown function (DUF436) BCJMU02_5168 PF02502 Ribose/Galactose Isomerase BCJMU02_5169 PF01451 Low molecular weight phosphotyrosine protein phosphatase BCJMU02_5170 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BCJMU02_5171 PF07681 DoxX BCJMU02_5172 PF01613 Flavin reductase like domain BCJMU02_5175 PF02659 Putative manganese efflux pump BCJMU02_5176 PF03481 Putative GTP-binding controlling metal-binding BCJMU02_5176 PF01300 Telomere recombination BCJMU02_5178 PF09551 Stage II sporulation protein R (spore_II_R) BCJMU02_5179 PF13847 Methyltransferase domain BCJMU02_5179 PF17827 PrmC N-terminal domain BCJMU02_5180 PF03462 PCRF domain BCJMU02_5180 PF00472 RF-1 domain BCJMU02_5181 PF00265 Thymidine kinase BCJMU02_5182 PF01197 Ribosomal protein L31 BCJMU02_5183 PF07498 Rho termination factor, N-terminal domain BCJMU02_5183 PF07497 Rho termination factor, RNA-binding domain BCJMU02_5183 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BCJMU02_5184 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded BCJMU02_5185 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BCJMU02_5186 PF01116 Fructose-bisphosphate aldolase class-II BCJMU02_5187 PF00072 Response regulator receiver domain BCJMU02_5188 PF00072 Response regulator receiver domain BCJMU02_5189 PF10740 Domain of unknown function (DUF2529) BCJMU02_5190 PF00117 Glutamine amidotransferase class-I BCJMU02_5190 PF06418 CTP synthase N-terminus BCJMU02_5191 PF05066 HB1, ASXL, restriction endonuclease HTH domain BCJMU02_5193 PF02770 Acyl-CoA dehydrogenase, middle domain BCJMU02_5193 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BCJMU02_5193 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BCJMU02_5194 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BCJMU02_5194 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BCJMU02_5194 PF02770 Acyl-CoA dehydrogenase, middle domain BCJMU02_5195 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BCJMU02_5195 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BCJMU02_5196 PF00108 Thiolase, N-terminal domain BCJMU02_5196 PF02803 Thiolase, C-terminal domain BCJMU02_5197 PF13183 4Fe-4S dicluster domain BCJMU02_5197 PF02754 Cysteine-rich domain BCJMU02_5198 PF13091 PLD-like domain BCJMU02_5199 PF03851 UV-endonuclease UvdE BCJMU02_5200 PF03707 Bacterial signalling protein N terminal repeat BCJMU02_5200 PF00990 Diguanylate cyclase, GGDEF domain BCJMU02_5200 PF00563 EAL domain BCJMU02_5204 PF00196 Bacterial regulatory proteins, luxR family BCJMU02_5204 PF00072 Response regulator receiver domain BCJMU02_5205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCJMU02_5205 PF07730 Histidine kinase BCJMU02_5207 PF00005 ABC transporter BCJMU02_5208 PF00557 Metallopeptidase family M24 BCJMU02_5210 PF02225 PA domain BCJMU02_5210 PF04389 Peptidase family M28 BCJMU02_5214 PF04542 Sigma-70 region 2 BCJMU02_5214 PF08281 Sigma-70, region 4 BCJMU02_5215 PF05746 DALR anticodon binding domain BCJMU02_5215 PF00750 tRNA synthetases class I (R) BCJMU02_5215 PF03485 Arginyl tRNA synthetase N terminal domain BCJMU02_5216 PF09148 Domain of unknown function (DUF1934) BCJMU02_5217 PF02016 LD-carboxypeptidase N-terminal domain BCJMU02_5217 PF17676 LD-carboxypeptidase C-terminal domain BCJMU02_5220 PF00491 Arginase family BCJMU02_5221 PF17284 Spermidine synthase tetramerisation domain BCJMU02_5222 PF07690 Major Facilitator Superfamily BCJMU02_5223 PF13411 MerR HTH family regulatory protein BCJMU02_5224 PF03009 Glycerophosphoryl diester phosphodiesterase family BCJMU02_5225 PF00905 Penicillin binding protein transpeptidase domain BCJMU02_5225 PF00912 Transglycosylase BCJMU02_5226 PF08741 YwhD family BCJMU02_5227 PF02163 Peptidase family M50 BCJMU02_5228 PF01361 Tautomerase enzyme BCJMU02_5229 PF01966 HD domain BCJMU02_5230 PF01497 Periplasmic binding protein BCJMU02_5231 PF00005 ABC transporter BCJMU02_5232 PF01032 FecCD transport family BCJMU02_5233 PF01032 FecCD transport family BCJMU02_5234 PF07293 Protein of unknown function (DUF1450) BCJMU02_5237 PF03099 Biotin/lipoate A/B protein ligase family BCJMU02_5238 PF01515 Phosphate acetyl/butaryl transferase BCJMU02_5239 PF06778 Chlorite dismutase BCJMU02_5240 PF07943 Penicillin-binding protein 5, C-terminal domain BCJMU02_5240 PF00768 D-alanyl-D-alanine carboxypeptidase BCJMU02_5241 PF07486 Cell Wall Hydrolase BCJMU02_5242 PF09671 Spore coat protein (Spore_GerQ) BCJMU02_5243 PF04241 Protein of unknown function (DUF423) BCJMU02_5245 PF02254 TrkA-N domain BCJMU02_5245 PF07885 Ion channel BCJMU02_5246 PF00860 Permease family BCJMU02_5248 PF12823 Domain of unknown function (DUF3817) BCJMU02_5249 PF03167 Uracil DNA glycosylase superfamily BCJMU02_5250 PF12679 ABC-2 family transporter protein BCJMU02_5251 PF00005 ABC transporter BCJMU02_5252 PF13472 GDSL-like Lipase/Acylhydrolase family BCJMU02_5253 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BCJMU02_5253 PF00356 Bacterial regulatory proteins, lacI family BCJMU02_5255 PF01842 ACT domain BCJMU02_5255 PF00742 Homoserine dehydrogenase BCJMU02_5255 PF03447 Homoserine dehydrogenase, NAD binding domain BCJMU02_5256 PF04204 Homoserine O-succinyltransferase BCJMU02_5257 PF01053 Cys/Met metabolism PLP-dependent enzyme BCJMU02_5259 PF13419 Haloacid dehalogenase-like hydrolase BCJMU02_5261 PF12323 Helix-turn-helix domain BCJMU02_5261 PF01385 Probable transposase BCJMU02_5261 PF07282 Putative transposase DNA-binding domain BCJMU02_5262 PF00027 Cyclic nucleotide-binding domain BCJMU02_5263 PF02525 Flavodoxin-like fold BCJMU02_5264 PF00072 Response regulator receiver domain BCJMU02_5264 PF00196 Bacterial regulatory proteins, luxR family BCJMU02_5265 PF07730 Histidine kinase BCJMU02_5265 PF13185 GAF domain BCJMU02_5266 PF08543 Phosphomethylpyrimidine kinase BCJMU02_5267 PF00990 Diguanylate cyclase, GGDEF domain BCJMU02_5267 PF07694 5TMR of 5TMR-LYT BCJMU02_5268 PF04328 Selenoprotein, putative BCJMU02_5269 PF13722 5TM C-terminal transporter carbon starvation CstA BCJMU02_5269 PF02554 Carbon starvation protein CstA BCJMU02_5270 PF00072 Response regulator receiver domain BCJMU02_5270 PF04397 LytTr DNA-binding domain BCJMU02_5271 PF07690 Major Facilitator Superfamily BCJMU02_5272 PF03808 Glycosyl transferase WecB/TagA/CpsF family BCJMU02_5275 PF03458 UPF0126 domain BCJMU02_5276 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BCJMU02_5278 PF03061 Thioesterase superfamily BCJMU02_5281 PF00535 Glycosyl transferase family 2 BCJMU02_5282 PF00005 ABC transporter BCJMU02_5282 PF12848 ABC transporter BCJMU02_5286 PF00535 Glycosyl transferase family 2 BCJMU02_5287 PF00440 Bacterial regulatory proteins, tetR family BCJMU02_5288 PF00873 AcrB/AcrD/AcrF family BCJMU02_5289 PF01625 Peptide methionine sulfoxide reductase BCJMU02_5289 PF01641 SelR domain BCJMU02_5290 PF01594 AI-2E family transporter BCJMU02_5291 PF04172 LrgB-like family BCJMU02_5292 PF03788 LrgA family BCJMU02_5293 PF00072 Response regulator receiver domain BCJMU02_5293 PF04397 LytTr DNA-binding domain BCJMU02_5294 PF07694 5TMR of 5TMR-LYT BCJMU02_5294 PF06580 Histidine kinase BCJMU02_5294 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCJMU02_5294 PF13492 GAF domain BCJMU02_5295 PF07690 Major Facilitator Superfamily BCJMU02_5296 PF02028 BCCT, betaine/carnitine/choline family transporter BCJMU02_5297 PF02898 Nitric oxide synthase, oxygenase domain BCJMU02_5298 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BCJMU02_5298 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BCJMU02_5300 PF02293 AmiS/UreI family transporter BCJMU02_5302 PF16363 GDP-mannose 4,6 dehydratase BCJMU02_5303 PF03006 Haemolysin-III related BCJMU02_5305 PF00271 Helicase conserved C-terminal domain BCJMU02_5305 PF00270 DEAD/DEAH box helicase BCJMU02_5305 PF03880 DbpA RNA binding domain BCJMU02_5307 PF00478 IMP dehydrogenase / GMP reductase domain BCJMU02_5308 PF01432 Peptidase family M3 BCJMU02_5308 PF08439 Oligopeptidase F BCJMU02_5310 PF02590 Predicted SPOUT methyltransferase BCJMU02_5312 PF13180 PDZ domain BCJMU02_5313 PF00753 Metallo-beta-lactamase superfamily BCJMU02_5314 PF09648 YycH protein BCJMU02_5315 PF07435 YycH protein BCJMU02_5316 PF00672 HAMP domain BCJMU02_5316 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCJMU02_5316 PF00512 His Kinase A (phospho-acceptor) domain BCJMU02_5316 PF13426 PAS domain BCJMU02_5317 PF00072 Response regulator receiver domain BCJMU02_5317 PF00486 Transcriptional regulatory protein, C terminal BCJMU02_5318 PF00709 Adenylosuccinate synthetase BCJMU02_5319 PF03796 DnaB-like helicase C terminal domain BCJMU02_5319 PF00772 DnaB-like helicase N terminal domain BCJMU02_5320 PF03948 Ribosomal protein L9, C-terminal domain BCJMU02_5320 PF01281 Ribosomal protein L9, N-terminal domain BCJMU02_5321 PF01368 DHH family BCJMU02_5321 PF02272 DHHA1 domain BCJMU02_5322 PF09991 Predicted membrane protein (DUF2232) BCJMU02_5323 PF01084 Ribosomal protein S18 BCJMU02_5324 PF00436 Single-strand binding protein family BCJMU02_5325 PF01250 Ribosomal protein S6 BCJMU02_5326 PF01926 50S ribosome-binding GTPase BCJMU02_5326 PF06071 Protein of unknown function (DUF933) BCJMU02_5327 PF06107 Bacterial protein of unknown function (DUF951) BCJMU02_5328 PF00924 Mechanosensitive ion channel BCJMU02_5329 PF06866 Protein of unknown function (DUF1256) BCJMU02_5330 PF17762 HTH domain found in ParB protein BCJMU02_5330 PF02195 ParB-like nuclease domain BCJMU02_5331 PF13614 AAA domain BCJMU02_5332 PF02195 ParB-like nuclease domain BCJMU02_5332 PF17762 HTH domain found in ParB protein BCJMU02_5333 PF02527 rRNA small subunit methyltransferase G BCJMU02_5334 PF01134 Glucose inhibited division protein A BCJMU02_5334 PF13932 GidA associated domain BCJMU02_5335 PF01926 50S ribosome-binding GTPase BCJMU02_5335 PF12631 MnmE helical domain BCJMU02_5335 PF10396 GTP-binding protein TrmE N-terminus BCJMU02_5336 PF14804 Jag N-terminus BCJMU02_5336 PF01424 R3H domain BCJMU02_5337 PF02096 60Kd inner membrane protein BCJMU02_5338 PF00825 Ribonuclease P BCJMU02_5339 PF00468 Ribosomal protein L34 BCJMU02_p1004 PF05504 Spore germination B3/ GerAC like, C-terminal BCJMU02_p1008 PF03323 Bacillus/Clostridium GerA spore germination protein BCJMU02_p1009 PF01609 Transposase DDE domain BCJMU02_p1015 PF00534 Glycosyl transferases group 1 BCJMU02_p1015 PF13579 Glycosyl transferase 4-like domain BCJMU02_p1018 PF01510 N-acetylmuramoyl-L-alanine amidase BCJMU02_p1026 PF01609 Transposase DDE domain BCJMU02_p1028 PF18419 ATP-grasp-like domain BCJMU02_p1028 PF02655 ATP-grasp domain BCJMU02_p1028 PF04262 Glutamate-cysteine ligase BCJMU02_p1030 PF00756 Putative esterase BCJMU02_p1031 PF08240 Alcohol dehydrogenase GroES-like domain BCJMU02_p1031 PF00107 Zinc-binding dehydrogenase BCJMU02_p1032 PF01638 HxlR-like helix-turn-helix BCJMU02_p1033 PF01609 Transposase DDE domain BCJMU02_p1034 PF01609 Transposase DDE domain BCJMU02_p1039 PF02915 Rubrerythrin BCJMU02_p1041 PF00440 Bacterial regulatory proteins, tetR family BCJMU02_p1042 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain BCJMU02_p1042 PF00391 PEP-utilising enzyme, mobile domain BCJMU02_p1043 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase BCJMU02_p1044 PF00753 Metallo-beta-lactamase superfamily BCJMU02_p1045 PF10710 Protein of unknown function (DUF2512) BCJMU02_p1046 PF11553 Protein of unknown function (DUF3231) BCJMU02_p1047 PF00269 Small, acid-soluble spore proteins, alpha/beta type BCJMU02_p1048 PF13823 Alcohol dehydrogenase GroES-associated BCJMU02_p1048 PF00107 Zinc-binding dehydrogenase BCJMU02_p1048 PF08240 Alcohol dehydrogenase GroES-like domain BCJMU02_p1050 PF00206 Lyase BCJMU02_p1050 PF10415 Fumarase C C-terminus BCJMU02_p1051 PF01609 Transposase DDE domain BCJMU02_p1052 PF13700 Domain of unknown function (DUF4158) BCJMU02_p1052 PF01526 Tn3 transposase DDE domain BCJMU02_p1055 PF03323 Bacillus/Clostridium GerA spore germination protein BCJMU02_p1058 PF00239 Resolvase, N terminal domain BCJMU02_p1058 PF02796 Helix-turn-helix domain of resolvase BCJMU02_p1059 PF00574 Clp protease BCJMU02_p1060 PF04239 Protein of unknown function (DUF421) BCJMU02_p1062 PF03862 SpoVAC/SpoVAEB sporulation membrane protein BCJMU02_p1063 PF07451 Stage V sporulation protein AD (SpoVAD) BCJMU02_p1064 PF03862 SpoVAC/SpoVAEB sporulation membrane protein BCJMU02_p1067 PF02899 Phage integrase, N-terminal SAM-like domain BCJMU02_p1067 PF00589 Phage integrase family BCJMU02_p1068 PF01609 Transposase DDE domain BCJMU02_p1069 PF01609 Transposase DDE domain BCJMU02_p1071 PF03323 Bacillus/Clostridium GerA spore germination protein BCJMU02_p1072 PF01520 N-acetylmuramoyl-L-alanine amidase BCJMU02_p1072 PF05036 Sporulation related domain BCJMU02_p1074 PF00239 Resolvase, N terminal domain BCJMU02_p1074 PF02796 Helix-turn-helix domain of resolvase BCJMU02_p1075 PF06445 GyrI-like small molecule binding domain BCJMU02_p1075 PF12833 Helix-turn-helix domain BCJMU02_p1076 PF02796 Helix-turn-helix domain of resolvase BCJMU02_p1076 PF00239 Resolvase, N terminal domain BCJMU02_p1077 PF01526 Tn3 transposase DDE domain BCJMU02_p1077 PF13700 Domain of unknown function (DUF4158) BCJMU02_p1079 PF04740 LXG domain of WXG superfamily BCJMU02_p1079 PF14436 Bacterial EndoU nuclease BCJMU02_p1080 PF01609 Transposase DDE domain BCJMU02_p1081 PF01609 Transposase DDE domain BCJMU02_p1083 PF03243 Alkylmercury lyase BCJMU02_p1083 PF12324 Helix-turn-helix domain of alkylmercury lyase BCJMU02_p1085 PF13411 MerR HTH family regulatory protein BCJMU02_p1087 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BCJMU02_p1087 PF07992 Pyridine nucleotide-disulphide oxidoreductase BCJMU02_p1087 PF00403 Heavy-metal-associated domain BCJMU02_p1091 PF13411 MerR HTH family regulatory protein BCJMU02_p1093 PF00239 Resolvase, N terminal domain BCJMU02_p1093 PF02796 Helix-turn-helix domain of resolvase BCJMU02_p1094 PF13700 Domain of unknown function (DUF4158) BCJMU02_p1094 PF01526 Tn3 transposase DDE domain BCJMU02_p1095 PF01609 Transposase DDE domain BCJMU02_p1096 PF01609 Transposase DDE domain BCJMU02_p1102 PF00589 Phage integrase family BCJMU02_p1102 PF02899 Phage integrase, N-terminal SAM-like domain BCJMU02_p1106 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BCJMU02_p1107 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BCJMU02_p1111 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin BCJMU02_p1111 PF18277 AbrB C-terminal domain BCJMU02_p1120 PF00216 Bacterial DNA-binding protein BCJMU02_p1122 PF01695 IstB-like ATP binding protein BCJMU02_p1123 PF00665 Integrase core domain BCJMU02_p1123 PF02796 Helix-turn-helix domain of resolvase BCJMU02_p1126 PF04235 Protein of unknown function (DUF418) BCJMU02_p1128 PF01609 Transposase DDE domain BCJMU02_p1129 PF00990 Diguanylate cyclase, GGDEF domain BCJMU02_p1129 PF03707 Bacterial signalling protein N terminal repeat BCJMU02_p1129 PF00563 EAL domain BCJMU02_p1131 PF00665 Integrase core domain BCJMU02_p1131 PF13333 Integrase core domain BCJMU02_p1131 PF13276 HTH-like domain BCJMU02_p1132 PF00294 pfkB family carbohydrate kinase BCJMU02_p1133 PF08244 Glycosyl hydrolases family 32 C terminal BCJMU02_p1133 PF00251 Glycosyl hydrolases family 32 N-terminal domain BCJMU02_p1134 PF00367 phosphotransferase system, EIIB BCJMU02_p1134 PF02378 Phosphotransferase system, EIIC BCJMU02_p1135 PF00356 Bacterial regulatory proteins, lacI family BCJMU02_p1135 PF13407 Periplasmic binding protein domain BCJMU02_p1137 PF01609 Transposase DDE domain BCJMU02_p1140 PF08645 Polynucleotide kinase 3 phosphatase BCJMU02_p1152 PF10087 Uncharacterized protein conserved in bacteria (DUF2325) BCJMU02_p1165 PF01348 Type II intron maturase BCJMU02_p1165 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) BCJMU02_p1185 PF13333 Integrase core domain BCJMU02_p1185 PF00665 Integrase core domain BCJMU02_p1185 PF13276 HTH-like domain BCJMU02_p1194 PF01385 Probable transposase BCJMU02_p1194 PF12323 Helix-turn-helix domain BCJMU02_p1194 PF07282 Putative transposase DNA-binding domain BCJMU02_p1197 PF00091 Tubulin/FtsZ family, GTPase domain BCJMU02_p1200 PF01580 FtsK/SpoIIIE family BCJMU02_p1200 PF17854 FtsK alpha domain BCJMU02_p1200 PF09397 Ftsk gamma domain BCJMU02_p1212 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) BCJMU02_p1212 PF01348 Type II intron maturase BCJMU02_p1224 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) BCJMU02_p1224 PF01348 Type II intron maturase BCJMU02_p1229 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) BCJMU02_p1234 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BCJMU02_p1234 PF03466 LysR substrate binding domain BCJMU02_p1235 PF07690 Major Facilitator Superfamily BCJMU02_p1236 PF05373 L-proline 3-hydroxylase, C-terminal BCJMU02_p1236 PF05118 Aspartyl/Asparaginyl beta-hydroxylase BCJMU02_p1243 PF03796 DnaB-like helicase C terminal domain BCJMU02_p1243 PF00772 DnaB-like helicase N terminal domain BCJMU02_p1246 PF05067 Manganese containing catalase BCJMU02_p1247 PF13817 IS66 C-terminal element BCJMU02_p1247 PF13007 Transposase C of IS166 homeodomain BCJMU02_p1247 PF03050 Transposase IS66 family BCJMU02_p1247 PF13005 zinc-finger binding domain of transposase IS66 BCJMU02_p1252 PF00082 Subtilase family BCJMU02_p1254 PF13344 Haloacid dehalogenase-like hydrolase BCJMU02_p1254 PF00293 NUDIX domain BCJMU02_p1255 PF13419 Haloacid dehalogenase-like hydrolase BCJMU02_p1256 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster BCJMU02_p1256 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region BCJMU02_p1256 PF07992 Pyridine nucleotide-disulphide oxidoreductase BCJMU02_p1257 PF01180 Dihydroorotate dehydrogenase BCJMU02_p1258 PF01180 Dihydroorotate dehydrogenase BCJMU02_p1259 PF04657 Putative inner membrane exporter, YdcZ BCJMU02_p1260 PF03641 Possible lysine decarboxylase BCJMU02_p1261 PF02195 ParB-like nuclease domain BCJMU02_p1262 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal BCJMU02_p1262 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal BCJMU02_p1263 PF00293 NUDIX domain BCJMU02_p1264 PF01321 Creatinase/Prolidase N-terminal domain BCJMU02_p1264 PF00557 Metallopeptidase family M24 BCJMU02_p1265 PF00291 Pyridoxal-phosphate dependent enzyme BCJMU02_p1266 PF00156 Phosphoribosyl transferase domain BCJMU02_p1271 PF00067 Cytochrome P450 BCJMU02_p1272 PF04439 Streptomycin adenylyltransferase BCJMU02_p1273 PF00239 Resolvase, N terminal domain BCJMU02_p1273 PF02796 Helix-turn-helix domain of resolvase BCJMU02_p1278 PF00144 Beta-lactamase BCJMU02_p1279 PF00144 Beta-lactamase BCJMU02_p1281 PF12146 Serine aminopeptidase, S33 BCJMU02_p1281 PF13026 Protein of unknown function (DUF3887) BCJMU02_p1283 PF01476 LysM domain BCJMU02_p1283 PF08239 Bacterial SH3 domain BCJMU02_p1283 PF00877 NlpC/P60 family BCJMU02_p1286 PF01447 Thermolysin metallopeptidase, catalytic domain BCJMU02_p1286 PF02868 Thermolysin metallopeptidase, alpha-helical domain BCJMU02_p1286 PF03413 Peptidase propeptide and YPEB domain BCJMU02_p1286 PF07504 Fungalysin/Thermolysin Propeptide Motif BCJMU02_p1287 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BCJMU02_p1287 PF08447 PAS fold BCJMU02_p1287 PF13426 PAS domain BCJMU02_p1288 PF00672 HAMP domain BCJMU02_p1288 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BCJMU02_p1288 PF02203 Tar ligand binding domain homologue BCJMU02_p1289 PF00269 Small, acid-soluble spore proteins, alpha/beta type BCJMU02_p1292 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading BCJMU02_p1292 PF18416 N-acetylglucosamine binding protein domain 2 BCJMU02_p1293 PF01022 Bacterial regulatory protein, arsR family BCJMU02_p1294 PF03413 Peptidase propeptide and YPEB domain BCJMU02_p1294 PF01447 Thermolysin metallopeptidase, catalytic domain BCJMU02_p1294 PF02868 Thermolysin metallopeptidase, alpha-helical domain BCJMU02_p1294 PF07504 Fungalysin/Thermolysin Propeptide Motif BCJMU02_p1303 PF02463 RecF/RecN/SMC N terminal domain BCJMU02_p1306 PF12826 Helix-hairpin-helix motif BCJMU02_p1306 PF04002 RadC-like JAB domain BCJMU02_p1312 PF14659 Phage integrase, N-terminal SAM-like domain BCJMU02_p1312 PF00589 Phage integrase family BCJMU02_p1313 PF13538 UvrD-like helicase C-terminal domain BCJMU02_p1318 PF01555 DNA methylase BCJMU02_p1318 PF18273 Type III R-M EcoP15I C-terminal domain BCJMU02_p1319 PF04851 Type III restriction enzyme, res subunit BCJMU02_p1319 PF08774 VRR-NUC domain BCJMU02_p1320 PF01381 Helix-turn-helix BCJMU02_p1335 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) BCJMU02_p1339 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) BCJMU02_p1341 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) BCJMU02_p1351 PF08378 Nuclease-related domain BCJMU02_p1352 PF02481 DNA recombination-mediator protein A BCJMU02_p1354 PF01131 DNA topoisomerase BCJMU02_p1354 PF01751 Toprim domain BCJMU02_p1354 PF13342 C-terminal repeat of topoisomerase BCJMU02_p1355 PF00565 Staphylococcal nuclease homologue BCJMU02_p1358 PF02600 Disulfide bond formation protein DsbB BCJMU02_p1359 PF01022 Bacterial regulatory protein, arsR family BCJMU02_p1360 PF17209 Hfq protein BCJMU02_p1362 PF18801 response regulator aspartate phosphatase H, N terminal BCJMU02_p1365 PF00589 Phage integrase family BCJMU02_p1371 PF00989 PAS fold BCJMU02_p1371 PF16736 Single Cache-like BCJMU02_p1371 PF00512 His Kinase A (phospho-acceptor) domain BCJMU02_p1371 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCJMU02_p1373 PF00486 Transcriptional regulatory protein, C terminal BCJMU02_p1373 PF00072 Response regulator receiver domain BCJMU02_p1374 PF13529 Peptidase_C39 like family BCJMU02_p1375 PF00857 Isochorismatase family BCJMU02_p2004 PF00589 Phage integrase family BCJMU02_p2004 PF14659 Phage integrase, N-terminal SAM-like domain BCJMU02_p2008 PF08308 PEGA domain BCJMU02_p2008 PF00069 Protein kinase domain BCJMU02_p2013 PF01580 FtsK/SpoIIIE family BCJMU02_p2013 PF17854 FtsK alpha domain BCJMU02_p2013 PF09397 Ftsk gamma domain BCJMU02_p2016 PF18496 Collagenase G catalytic helper subdomain BCJMU02_p2016 PF04151 Bacterial pre-peptidase C-terminal domain BCJMU02_p2016 PF08453 Peptidase family M9 N-terminal BCJMU02_p2016 PF01752 Collagenase BCJMU02_p2017 PF00589 Phage integrase family BCJMU02_p2017 PF02899 Phage integrase, N-terminal SAM-like domain BCJMU02_p2022 PF02796 Helix-turn-helix domain of resolvase BCJMU02_p2022 PF00239 Resolvase, N terminal domain BCJMU02_p2038 PF02810 SEC-C motif BCJMU02_p2038 PF05225 helix-turn-helix, Psq domain BCJMU02_p2040 PF04002 RadC-like JAB domain BCJMU02_p2043 PF01138 3' exoribonuclease family, domain 1 BCJMU02_p2043 PF00013 KH domain BCJMU02_p2043 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain BCJMU02_p2043 PF03725 3' exoribonuclease family, domain 2 BCJMU02_p2043 PF00575 S1 RNA binding domain BCJMU02_p2047 PF01348 Type II intron maturase BCJMU02_p2047 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) BCJMU02_p2050 PF01348 Type II intron maturase BCJMU02_p2050 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) BCJMU02_p2051 PF01609 Transposase DDE domain BCJMU02_p2053 PF00589 Phage integrase family BCJMU02_p2057 PF00877 NlpC/P60 family BCJMU02_p2061 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) BCJMU02_p2076 PF00091 Tubulin/FtsZ family, GTPase domain BCJMU02_p2086 PF03979 Sigma-70 factor, region 1.1 BCJMU02_p2086 PF00140 Sigma-70 factor, region 1.2 BCJMU02_p2086 PF04542 Sigma-70 region 2 BCJMU02_p2086 PF04545 Sigma-70, region 4 BCJMU02_p2086 PF04539 Sigma-70 region 3 BCJMU02_p2091 PF10502 Signal peptidase, peptidase S26 BCJMU02_p2092 PF12323 Helix-turn-helix domain BCJMU02_p2092 PF01385 Probable transposase BCJMU02_p2092 PF07282 Putative transposase DNA-binding domain BCJMU02_p2099 PF13276 HTH-like domain BCJMU02_p2099 PF13333 Integrase core domain BCJMU02_p2099 PF00665 Integrase core domain BCJMU02_p2104 PF03050 Transposase IS66 family BCJMU02_p2104 PF13817 IS66 C-terminal element BCJMU02_p2104 PF13007 Transposase C of IS166 homeodomain BCJMU02_p2104 PF13005 zinc-finger binding domain of transposase IS66 BCJMU02_p2107 PF10396 GTP-binding protein TrmE N-terminus BCJMU02_p2107 PF01926 50S ribosome-binding GTPase BCJMU02_p2107 PF12631 MnmE helical domain BCJMU02_p2108 PF00350 Dynamin family BCJMU02_p2109 PF01609 Transposase DDE domain BCJMU02_p2111 PF07282 Putative transposase DNA-binding domain BCJMU02_p2111 PF01385 Probable transposase BCJMU02_p2111 PF12323 Helix-turn-helix domain BCJMU02_p2115 PF07972 NrdI Flavodoxin like BCJMU02_p2116 PF12323 Helix-turn-helix domain BCJMU02_p2116 PF01385 Probable transposase BCJMU02_p2116 PF07282 Putative transposase DNA-binding domain BCJMU02_p2120 PF01385 Probable transposase BCJMU02_p2120 PF12323 Helix-turn-helix domain BCJMU02_p2120 PF07282 Putative transposase DNA-binding domain BCJMU02_p2122 PF13610 DDE domain BCJMU02_p2126 PF05105 Bacteriophage holin family BCJMU02_p2131 PF01609 Transposase DDE domain BCJMU02_p2133 PF13333 Integrase core domain BCJMU02_p2133 PF13276 HTH-like domain BCJMU02_p2133 PF00665 Integrase core domain BCJMU02_p2137 PF00395 S-layer homology domain BCJMU02_p2137 PF02368 Bacterial Ig-like domain (group 2) BCJMU02_p2141 PF01609 Transposase DDE domain BCJMU02_p2142 PF01609 Transposase DDE domain BCJMU02_p2143 PF13700 Domain of unknown function (DUF4158) BCJMU02_p2143 PF01526 Tn3 transposase DDE domain BCJMU02_p2144 PF00239 Resolvase, N terminal domain BCJMU02_p2144 PF02796 Helix-turn-helix domain of resolvase BCJMU02_p2145 PF12833 Helix-turn-helix domain BCJMU02_p2145 PF06445 GyrI-like small molecule binding domain BCJMU02_p2148 PF00665 Integrase core domain BCJMU02_p2148 PF13333 Integrase core domain BCJMU02_p2149 PF13495 Phage integrase, N-terminal SAM-like domain BCJMU02_p2149 PF00589 Phage integrase family BCJMU02_p2154 PF13610 DDE domain BCJMU02_p2169 PF18801 response regulator aspartate phosphatase H, N terminal BCJMU02_p2180 PF13610 DDE domain BCJMU02_p2182 PF13610 DDE domain BCJMU02_p2185 PF12169 DNA polymerase III subunits gamma and tau domain III BCJMU02_p2186 PF12169 DNA polymerase III subunits gamma and tau domain III BCJMU02_p2188 PF01385 Probable transposase BCJMU02_p2188 PF07282 Putative transposase DNA-binding domain BCJMU02_p2188 PF12323 Helix-turn-helix domain BCJMU02_p2193 PF02481 DNA recombination-mediator protein A BCJMU02_p2193 PF17782 DprA winged helix domain BCJMU02_p2197 PF01609 Transposase DDE domain BCJMU02_p323 PF01609 Transposase DDE domain BCJMU02_p324 PF01609 Transposase DDE domain BCJMU02_p332 PF00145 C-5 cytosine-specific DNA methylase BCJMU02_p48 PF01446 Replication protein BCJMU02_p52 PF01076 Plasmid recombination enzyme BCJMU02_p54 PF00893 Small Multidrug Resistance protein BCJMU02_p61 PF00398 Ribosomal RNA adenine dimethylase BCJMU02_p62 PF01446 Replication protein BCJMU02_t0097 PF05698 Bacterial trigger factor protein (TF) C-terminus BCJMU02_t0097 PF05697 Bacterial trigger factor protein (TF)