locus-tag	class	description
BCJMU39_0002	COG0592	DNA-directed DNA polymerase activity
BCJMU39_0003	COG2501	S4 domain
BCJMU39_0005	COG0187	DNA topoisomerase II activity
BCJMU39_0006	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
BCJMU39_0008	COG0516	GMP reductase activity
BCJMU39_0008	COG0517	IMP dehydrogenase activity
BCJMU39_0009	COG1686	Belongs to the peptidase S11 family
BCJMU39_0014	COG1428	Deoxynucleoside kinase
BCJMU39_0015	COG1428	Deoxynucleoside kinase
BCJMU39_0016	COG1335	isochorismatase
BCJMU39_0017	COG0590	tRNA wobble adenosine to inosine editing
BCJMU39_0018	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
BCJMU39_0024	COG1982	Orn Lys Arg decarboxylase major
BCJMU39_0026	COG0470	DNA polymerase III
BCJMU39_0027	COG1774	PSP1 C-terminal conserved region
BCJMU39_0029	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
BCJMU39_0031	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
BCJMU39_0032	COG2002	toxin-antitoxin pair type II binding
BCJMU39_0033	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
BCJMU39_0033	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
BCJMU39_0034	COG0084	hydrolase, TatD family'
BCJMU39_0035	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
BCJMU39_0038	COG4466	Protein conserved in bacteria
BCJMU39_0041	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
BCJMU39_0042	COG0251	oxidation-reduction process
BCJMU39_0048	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
BCJMU39_0049	COG2002	toxin-antitoxin pair type II binding
BCJMU39_0050	COG2244	polysaccharide biosynthetic process
BCJMU39_0051	COG3956	TIGRFAM MazG family protein
BCJMU39_0052	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
BCJMU39_0056	COG1098	S1 RNA binding domain
BCJMU39_0057	COG2208	phosphoserine phosphatase activity
BCJMU39_0059	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
BCJMU39_0060	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
BCJMU39_0063	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
BCJMU39_0064	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
BCJMU39_0065	COG0512	Glutamine amidotransferase of anthranilate synthase
BCJMU39_0066	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
BCJMU39_0067	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
BCJMU39_0068	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
BCJMU39_0069	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
BCJMU39_0070	COG1396	sequence-specific DNA binding
BCJMU39_0071	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
BCJMU39_0074	COG3880	PFAM UvrB UvrC protein
BCJMU39_0076	COG0542	response to heat
BCJMU39_0077	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
BCJMU39_0079	COG4956	integral membrane protein (PIN domain superfamily)
BCJMU39_0083	COG1045	serine acetyltransferase
BCJMU39_0086	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
BCJMU39_0087	COG3688	RNA-binding protein containing a PIN domain
BCJMU39_0089	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
BCJMU39_0090	COG0250	Participates in transcription elongation, termination and antitermination
BCJMU39_0091	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
BCJMU39_0095	COG2813	Specifically methylates the guanine in position
BCJMU39_0098	COG1358	cellular component organization or biogenesis
BCJMU39_0112	COG0255	Belongs to the universal ribosomal protein uL29 family
BCJMU39_0124	COG0201	protein transport
BCJMU39_0126	COG0024	Methionine aminopeptidase
BCJMU39_0128	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
BCJMU39_0134	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
BCJMU39_0139	COG0860	N-Acetylmuramoyl-L-alanine amidase
BCJMU39_0140	COG0489	protein tyrosine kinase activity
BCJMU39_0142	COG2194	sulfuric ester hydrolase activity
BCJMU39_0143	COG0726	polysaccharide deacetylase
BCJMU39_0147	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
BCJMU39_0148	COG4856	YbbR-like protein
BCJMU39_0152	COG0596	Alpha beta hydrolase
BCJMU39_0156	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
BCJMU39_0162	COG1028	Short-chain dehydrogenase reductase Sdr
BCJMU39_0163	COG2011	ABC-type metal ion transport system permease component
BCJMU39_0165	COG1464	Belongs to the NlpA lipoprotein family
BCJMU39_0166	COG0604	alcohol dehydrogenase
BCJMU39_0168	COG0277	FAD linked oxidase domain protein
BCJMU39_0169	COG2271	Major facilitator Superfamily
BCJMU39_0171	COG2814	Major facilitator Superfamily
BCJMU39_0174	COG0601	transmembrane transport
BCJMU39_0175	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BCJMU39_0176	COG0444	Belongs to the ABC transporter superfamily
BCJMU39_0177	COG4608	Belongs to the ABC transporter superfamily
BCJMU39_0178	COG4166	transmembrane transport
BCJMU39_0180	COG2207	Transcriptional regulator
BCJMU39_0182	COG1309	transcriptional regulator
BCJMU39_0184	COG4166	transmembrane transport
BCJMU39_0185	COG4166	transmembrane transport
BCJMU39_0186	COG0656	L-ascorbic acid biosynthetic process
BCJMU39_0187	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
BCJMU39_0190	COG4149	molybdate abc transporter
BCJMU39_0191	COG0725	ABC transporter, periplasmic molybdate-binding protein
BCJMU39_0192	COG1910	domain protein
BCJMU39_0194	COG0697	spore germination
BCJMU39_0196	COG0204	Acyl-transferase
BCJMU39_0197	COG1609	Transcriptional regulator
BCJMU39_0199	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BCJMU39_0201	COG0084	hydrolase, TatD family'
BCJMU39_0204	COG5298	Protein conserved in bacteria
BCJMU39_0209	COG0488	(ABC) transporter
BCJMU39_0210	COG4585	Histidine kinase
BCJMU39_0211	COG2197	response regulator
BCJMU39_0212	COG1131	(ABC) transporter
BCJMU39_0213	COG1511	domain protein
BCJMU39_0213	COG0842	Transport permease protein
BCJMU39_0214	COG0842	Transport permease protein
BCJMU39_0216	COG0747	negative chemotaxis
BCJMU39_0217	COG0601	transmembrane transport
BCJMU39_0218	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BCJMU39_0219	COG0444	Belongs to the ABC transporter superfamily
BCJMU39_0220	COG4608	Belongs to the ABC transporter superfamily
BCJMU39_0221	COG0561	phosphatase activity
BCJMU39_0224	COG3185	4-Hydroxyphenylpyruvate dioxygenase
BCJMU39_0225	COG0179	Fumarylacetoacetate (FAA) hydrolase
BCJMU39_0227	COG2814	Major facilitator Superfamily
BCJMU39_0229	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
BCJMU39_0231	COG4294	response to UV
BCJMU39_0232	COG0457	Tetratricopeptide repeat
BCJMU39_0232	COG0705	Rhomboid family
BCJMU39_0234	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
BCJMU39_0235	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
BCJMU39_0236	COG0864	Transcriptional regulator
BCJMU39_0237	COG2337	Toxic component of a toxin-antitoxin (TA) module
BCJMU39_0238	COG2183	response to ionizing radiation
BCJMU39_0240	COG0802	atpase or kinase
BCJMU39_0241	COG1214	PFAM Peptidase M22, glycoprotease
BCJMU39_0242	COG0456	acetyltransferase
BCJMU39_0244	COG0488	(ABC) transporter
BCJMU39_0247	COG1266	CAAX protease self-immunity
BCJMU39_0251	COG2252	PERMEase
BCJMU39_0253	COG5002	protein histidine kinase activity
BCJMU39_0255	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
BCJMU39_0261	COG2205	protein histidine kinase activity
BCJMU39_0262	COG0745	RESPONSE REGULATOR receiver
BCJMU39_0263	COG0697	spore germination
BCJMU39_0265	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
BCJMU39_0266	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
BCJMU39_0267	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
BCJMU39_0269	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
BCJMU39_0272	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
BCJMU39_0274	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
BCJMU39_0276	COG0151	Belongs to the GarS family
BCJMU39_0281	COG0210	DNA helicase
BCJMU39_0283	COG4851	CamS sex pheromone cAM373 precursor
BCJMU39_0287	COG1335	isochorismatase
BCJMU39_0288	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
BCJMU39_0289	COG2011	ABC-type metal ion transport system permease component
BCJMU39_0290	COG1464	Belongs to the NlpA lipoprotein family
BCJMU39_0292	COG0003	Pfam Anion-transporting ATPase
BCJMU39_0293	COG1846	Transcriptional regulator
BCJMU39_0294	COG4682	membrane
BCJMU39_0298	COG1597	lipid kinase activity
BCJMU39_0299	COG0546	phosphoglycolate phosphatase activity
BCJMU39_0300	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
BCJMU39_0302	COG1012	belongs to the aldehyde dehydrogenase family
BCJMU39_0303	COG2076	Multidrug Resistance protein
BCJMU39_0305	COG2309	aminopeptidase activity
BCJMU39_0310	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
BCJMU39_0311	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
BCJMU39_0312	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
BCJMU39_0314	COG5002	protein histidine kinase activity
BCJMU39_0315	COG4807	Protein conserved in bacteria
BCJMU39_0320	COG1757	Na H antiporter
BCJMU39_0321	COG1473	amidohydrolase
BCJMU39_0324	COG0450	alkyl hydroperoxide reductase
BCJMU39_0328	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BCJMU39_0329	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BCJMU39_0330	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
BCJMU39_0334	COG0166	Belongs to the GPI family
BCJMU39_0342	COG3541	Predicted nucleotidyltransferase
BCJMU39_0343	COG2814	Major facilitator Superfamily
BCJMU39_0344	COG0723	plastoquinol--plastocyanin reductase activity
BCJMU39_0344	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BCJMU39_0349	COG0765	amino acid transport
BCJMU39_0350	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BCJMU39_0352	COG0840	transmembrane signaling receptor activity
BCJMU39_0353	COG0840	transmembrane signaling receptor activity
BCJMU39_0354	COG0277	FAD linked oxidase domain protein
BCJMU39_0359	COG0366	Alpha amylase catalytic
BCJMU39_0360	COG1263	PTS System
BCJMU39_0360	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BCJMU39_0360	COG2190	(PTS) system
BCJMU39_0366	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
BCJMU39_0369	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
BCJMU39_0371	COG1116	anion transmembrane transporter activity
BCJMU39_0372	COG0488	(ABC) transporter
BCJMU39_0382	COG2270	Major facilitator Superfamily
BCJMU39_0388	COG2310	stress, protein
BCJMU39_0389	COG2310	stress, protein
BCJMU39_0390	COG2310	stress, protein
BCJMU39_0391	COG0861	Integral membrane protein TerC family
BCJMU39_0393	COG3853	Toxic anion resistance protein (TelA)
BCJMU39_0396	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
BCJMU39_0398	COG1295	ribonuclease BN
BCJMU39_0400	COG2217	Heavy metal translocating P-type atpase
BCJMU39_0401	COG0697	spore germination
BCJMU39_0403	COG0681	Belongs to the peptidase S26 family
BCJMU39_0405	COG0586	Pfam SNARE associated Golgi protein
BCJMU39_0408	COG3871	stress protein (general stress protein 26)
BCJMU39_0409	COG0387	Pfam Sodium calcium exchanger
BCJMU39_0411	COG0535	radical SAM domain protein
BCJMU39_0415	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
BCJMU39_0416	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
BCJMU39_0417	COG0101	tRNA pseudouridine synthase activity
BCJMU39_0421	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
BCJMU39_0427	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BCJMU39_0427	COG1263	PTS System
BCJMU39_0428	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
BCJMU39_0432	COG0463	Glycosyl transferase, family 2
BCJMU39_0434	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
BCJMU39_0437	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
BCJMU39_0443	COG1228	amidohydrolase
BCJMU39_0444	COG1090	epimerase
BCJMU39_0450	COG1988	membrane-bound metal-dependent
BCJMU39_0451	COG1194	a g-specific adenine glycosylase
BCJMU39_0456	COG1132	(ABC) transporter
BCJMU39_0457	COG4129	membrane
BCJMU39_0458	COG0070	glutamate synthase
BCJMU39_0458	COG0069	glutamate synthase activity
BCJMU39_0458	COG0067	glutamate synthase
BCJMU39_0460	COG4555	ABC transporter
BCJMU39_0464	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
BCJMU39_0465	COG0735	belongs to the Fur family
BCJMU39_0470	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
BCJMU39_0471	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
BCJMU39_0472	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
BCJMU39_0474	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
BCJMU39_0475	COG5001	Diguanylate cyclase
BCJMU39_0475	COG1716	ATPase activity
BCJMU39_0476	COG2766	serine protein kinase
BCJMU39_0480	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
BCJMU39_0482	COG1585	Membrane protein implicated in regulation of membrane protease activity
BCJMU39_0483	COG2268	Band 7 protein
BCJMU39_0485	COG3290	protein histidine kinase activity
BCJMU39_0486	COG4565	transcriptional regulatory protein
BCJMU39_0487	COG2851	Citrate transporter
BCJMU39_0491	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
BCJMU39_0492	COG3842	ATPase activity
BCJMU39_0493	COG1175	transmembrane transport
BCJMU39_0494	COG0395	ABC-type sugar transport system, permease component
BCJMU39_0497	COG0745	RESPONSE REGULATOR receiver
BCJMU39_0498	COG5002	protein histidine kinase activity
BCJMU39_0500	COG4990	cell redox homeostasis
BCJMU39_0502	COG0697	spore germination
BCJMU39_0503	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BCJMU39_0505	COG5002	protein histidine kinase activity
BCJMU39_0506	COG0745	RESPONSE REGULATOR receiver
BCJMU39_0508	COG0456	acetyltransferase
BCJMU39_0508	COG0454	-acetyltransferase
BCJMU39_0509	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
BCJMU39_0510	COG3383	formate dehydrogenase (NAD+) activity
BCJMU39_0511	COG2427	Protein of unknown function (DUF1641)
BCJMU39_0514	COG0531	amino acid
BCJMU39_0516	COG0640	Transcriptional regulator
BCJMU39_0517	COG2217	Heavy metal translocating P-type atpase
BCJMU39_0518	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
BCJMU39_0521	COG3227	Zinc metalloprotease (Elastase)
BCJMU39_0525	COG2720	vancomycin resistance protein
BCJMU39_0526	COG1316	TRANSCRIPTIONal
BCJMU39_0527	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
BCJMU39_0528	COG0346	lactoylglutathione lyase activity
BCJMU39_0529	COG1253	flavin adenine dinucleotide binding
BCJMU39_0530	COG1027	Aspartate ammonia-lyase
BCJMU39_0531	COG1620	l-lactate permease
BCJMU39_0534	COG3104	oligopeptide transport
BCJMU39_0535	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
BCJMU39_0536	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BCJMU39_0537	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BCJMU39_0539	COG2226	methyltransferase
BCJMU39_0540	COG0156	8-amino-7-oxononanoate synthase activity
BCJMU39_0541	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
BCJMU39_0542	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
BCJMU39_0544	COG4548	von Willebrand factor, type A
BCJMU39_0545	COG0714	Associated with various cellular activities
BCJMU39_0546	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BCJMU39_0549	COG0531	amino acid
BCJMU39_0550	COG2188	Transcriptional regulator
BCJMU39_0551	COG1263	PTS System
BCJMU39_0551	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BCJMU39_0552	COG0366	Alpha amylase catalytic
BCJMU39_0555	COG0697	spore germination
BCJMU39_0557	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
BCJMU39_0558	COG1115	amino acid carrier protein
BCJMU39_0559	COG1126	abc transporter atp-binding protein
BCJMU39_0560	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BCJMU39_0561	COG0765	amino acid transport
BCJMU39_0562	COG0765	amino acid transport
BCJMU39_0563	COG0833	amino acid
BCJMU39_0568	COG2378	regulation of single-species biofilm formation
BCJMU39_0569	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
BCJMU39_0570	COG5002	protein histidine kinase activity
BCJMU39_0573	COG0659	secondary active sulfate transmembrane transporter activity
BCJMU39_0575	COG4166	transmembrane transport
BCJMU39_0577	COG0601	transmembrane transport
BCJMU39_0578	COG4608	Belongs to the ABC transporter superfamily
BCJMU39_0580	COG2271	Major facilitator Superfamily
BCJMU39_0581	COG1846	Transcriptional regulator
BCJMU39_0582	COG0477	Major facilitator Superfamily
BCJMU39_0583	COG1609	Transcriptional regulator
BCJMU39_0584	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BCJMU39_0587	COG1172	Belongs to the binding-protein-dependent transport system permease family
BCJMU39_0588	COG1879	ABC-type sugar transport system periplasmic component
BCJMU39_0593	COG1063	alcohol dehydrogenase
BCJMU39_0596	COG3568	Endonuclease Exonuclease Phosphatase
BCJMU39_0602	COG0840	transmembrane signaling receptor activity
BCJMU39_0603	COG1388	LysM domain
BCJMU39_0603	COG3584	3D domain protein
BCJMU39_0604	COG1476	TRANSCRIPTIONal
BCJMU39_0607	COG3104	oligopeptide transport
BCJMU39_0609	COG1114	Component of the transport system for branched-chain amino acids
BCJMU39_0610	COG1464	Belongs to the NlpA lipoprotein family
BCJMU39_0611	COG1960	acyl-CoA dehydrogenase activity
BCJMU39_0612	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
BCJMU39_0613	COG2011	ABC-type metal ion transport system permease component
BCJMU39_0616	COG1113	amino acid transport
BCJMU39_0617	COG2252	PERMEase
BCJMU39_0620	COG2153	protein acetylation
BCJMU39_0622	COG0569	domain protein
BCJMU39_0622	COG0475	glutathione-regulated potassium exporter activity
BCJMU39_0625	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
BCJMU39_0626	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
BCJMU39_0627	COG4990	cell redox homeostasis
BCJMU39_0630	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
BCJMU39_0631	COG0697	spore germination
BCJMU39_0632	COG0531	amino acid
BCJMU39_0634	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
BCJMU39_0635	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
BCJMU39_0636	COG1918	ferrous iron import across plasma membrane
BCJMU39_0636	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
BCJMU39_0637	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
BCJMU39_0638	COG0573	inorganic phosphate transmembrane transporter activity
BCJMU39_0639	COG0581	inorganic phosphate transmembrane transporter activity
BCJMU39_0640	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
BCJMU39_0641	COG2905	signal-transduction protein containing cAMP-binding and CBS domains
BCJMU39_0645	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
BCJMU39_0646	COG1116	anion transmembrane transporter activity
BCJMU39_0647	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
BCJMU39_0648	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
BCJMU39_0649	COG0352	thiamine-phosphate diphosphorylase activity
BCJMU39_0650	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BCJMU39_0651	COG2104	thiamine diphosphate biosynthetic process
BCJMU39_0653	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
BCJMU39_0654	COG0351	phosphomethylpyrimidine kinase
BCJMU39_0661	COG2205	protein histidine kinase activity
BCJMU39_0662	COG2814	Major facilitator Superfamily
BCJMU39_0663	COG1846	Transcriptional regulator
BCJMU39_0667	COG1136	(ABC) transporter
BCJMU39_0669	COG2252	PERMEase
BCJMU39_0670	COG1028	Short-chain dehydrogenase reductase Sdr
BCJMU39_0674	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
BCJMU39_0682	COG0778	Nitroreductase
BCJMU39_0683	COG2719	SpoVR family
BCJMU39_0686	COG3591	Belongs to the peptidase S1B family
BCJMU39_0688	COG0446	pyridine nucleotide-disulphide oxidoreductase
BCJMU39_0689	COG1937	Protein conserved in bacteria
BCJMU39_0690	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
BCJMU39_0690	COG0425	Belongs to the sulfur carrier protein TusA family
BCJMU39_0691	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BCJMU39_0691	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
BCJMU39_0692	COG0425	Belongs to the sulfur carrier protein TusA family
BCJMU39_0693	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
BCJMU39_0695	COG2210	Belongs to the sulfur carrier protein TusA family
BCJMU39_0696	COG0730	response to heat
BCJMU39_0698	COG1316	TRANSCRIPTIONal
BCJMU39_0699	COG0604	alcohol dehydrogenase
BCJMU39_0700	COG1283	sodium-dependent phosphate transmembrane transporter activity
BCJMU39_0703	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
BCJMU39_0703	COG3711	transcriptional antiterminator
BCJMU39_0704	COG1447	Phosphotransferase system cellobiose-specific component IIA
BCJMU39_0705	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
BCJMU39_0709	COG1388	LysM domain
BCJMU39_0709	COG3584	3D domain protein
BCJMU39_0710	COG0577	efflux transmembrane transporter activity
BCJMU39_0711	COG1136	(ABC) transporter
BCJMU39_0713	COG5522	Integral membrane protein (intg_mem_TP0381)
BCJMU39_0716	COG0577	efflux transmembrane transporter activity
BCJMU39_0717	COG1114	Component of the transport system for branched-chain amino acids
BCJMU39_0718	COG3546	catalase activity
BCJMU39_0725	COG0586	Pfam SNARE associated Golgi protein
BCJMU39_0733	COG0531	amino acid
BCJMU39_0734	COG0475	glutathione-regulated potassium exporter activity
BCJMU39_0736	COG1737	Transcriptional regulator
BCJMU39_0738	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BCJMU39_0738	COG1263	PTS System
BCJMU39_0740	COG2259	Doxx family
BCJMU39_0743	COG1522	sequence-specific DNA binding
BCJMU39_0746	COG2076	Multidrug Resistance protein
BCJMU39_0747	COG1309	transcriptional regulator
BCJMU39_0748	COG2814	Major facilitator Superfamily
BCJMU39_0749	COG0657	acetylesterase activity
BCJMU39_0751	COG2124	cytochrome p450
BCJMU39_0753	COG1063	alcohol dehydrogenase
BCJMU39_0754	COG4533	DNA binding
BCJMU39_0755	COG2211	Major facilitator Superfamily
BCJMU39_0757	COG0693	protein deglycase activity
BCJMU39_0758	COG0753	catalase activity
BCJMU39_0760	COG0531	amino acid
BCJMU39_0761	COG1012	belongs to the aldehyde dehydrogenase family
BCJMU39_0762	COG1132	(ABC) transporter
BCJMU39_0763	COG1132	(ABC) transporter
BCJMU39_0764	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BCJMU39_0765	COG0765	amino acid transport
BCJMU39_0766	COG1126	abc transporter atp-binding protein
BCJMU39_0769	COG0189	ligase activity
BCJMU39_0775	COG0028	Belongs to the TPP enzyme family
BCJMU39_0776	COG3527	Alpha-acetolactate decarboxylase
BCJMU39_0778	COG0561	phosphatase activity
BCJMU39_0779	COG0635	Involved in the biosynthesis of porphyrin-containing compound
BCJMU39_0782	COG0659	secondary active sulfate transmembrane transporter activity
BCJMU39_0786	COG2244	polysaccharide biosynthetic process
BCJMU39_0789	COG4193	domain, Protein
BCJMU39_0789	COG5263	repeat protein
BCJMU39_0792	COG1024	Enoyl-CoA hydratase
BCJMU39_0796	COG1363	Peptidase, m42
BCJMU39_0811	COG0582	viral genome integration into host DNA
BCJMU39_0820	COG0322	excinuclease ABC activity
BCJMU39_0822	COG1649	PFAM Uncharacterised BCR, COG1649
BCJMU39_0828	COG0601	transmembrane transport
BCJMU39_0829	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BCJMU39_0830	COG0444	Belongs to the ABC transporter superfamily
BCJMU39_0831	COG4608	Belongs to the ABC transporter superfamily
BCJMU39_0837	COG0477	Major facilitator Superfamily
BCJMU39_0839	COG3290	protein histidine kinase activity
BCJMU39_0840	COG4565	transcriptional regulatory protein
BCJMU39_0841	COG3181	Tripartite tricarboxylate transporter family receptor
BCJMU39_0844	COG4096	Type I site-specific restriction-modification system, R (Restriction) subunit and related
BCJMU39_0852	COG0789	Transcriptional regulator
BCJMU39_0852	COG4978	Transcriptional regulator
BCJMU39_0861	COG0305	Participates in initiation and elongation during chromosome replication
BCJMU39_0870	COG0477	Major facilitator Superfamily
BCJMU39_0877	COG2801	Transposase and inactivated derivatives
BCJMU39_0878	COG2801	Transposase and inactivated derivatives
BCJMU39_0887	COG1404	Belongs to the peptidase S8 family
BCJMU39_0901	COG3711	transcriptional antiterminator
BCJMU39_0902	COG1263	PTS System
BCJMU39_0902	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BCJMU39_0902	COG2190	(PTS) system
BCJMU39_0903	COG2723	6-phospho-beta-galactosidase activity
BCJMU39_0908	COG0367	asparagine synthase
BCJMU39_0911	COG1132	(ABC) transporter
BCJMU39_0913	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
BCJMU39_0913	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
BCJMU39_0925	COG1136	(ABC) transporter
BCJMU39_0925	COG0577	efflux transmembrane transporter activity
BCJMU39_0930	COG1183	phosphatidylcholine synthase activity
BCJMU39_0933	COG2376	Dihydroxyacetone kinase
BCJMU39_0935	COG2376	Dihydroxyacetone kinase
BCJMU39_0955	COG3237	CsbD-like
BCJMU39_0960	COG1191	sigma factor activity
BCJMU39_0962	COG2208	phosphoserine phosphatase activity
BCJMU39_0963	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
BCJMU39_0964	COG2198	Histidine kinase
BCJMU39_0964	COG2205	protein histidine kinase activity
BCJMU39_0964	COG0784	Response regulator, receiver
BCJMU39_0964	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BCJMU39_0971	COG0745	RESPONSE REGULATOR receiver
BCJMU39_0972	COG0745	RESPONSE REGULATOR receiver
BCJMU39_0973	COG2205	protein histidine kinase activity
BCJMU39_0981	COG0420	3'-5' exonuclease activity
BCJMU39_0982	COG4717	serine-type aminopeptidase activity
BCJMU39_0985	COG0346	lactoylglutathione lyase activity
BCJMU39_0986	COG0346	lactoylglutathione lyase activity
BCJMU39_0987	COG0457	Tetratricopeptide repeat
BCJMU39_0990	COG2267	carboxylic ester hydrolase activity
BCJMU39_0996	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
BCJMU39_0997	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
BCJMU39_0999	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
BCJMU39_1000	COG2963	transposase activity
BCJMU39_1001	COG2801	Transposase and inactivated derivatives
BCJMU39_1010	COG0477	Major facilitator Superfamily
BCJMU39_1011	COG0477	Major facilitator Superfamily
BCJMU39_1013	COG3973	AAA domain
BCJMU39_1014	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
BCJMU39_1019	COG4980	gas vesicle protein
BCJMU39_1020	COG0537	adenosine 5'-monophosphoramidase activity
BCJMU39_1021	COG1131	(ABC) transporter
BCJMU39_1022	COG4473	ABC transporter
BCJMU39_1025	COG1309	transcriptional regulator
BCJMU39_1027	COG3402	PFAM membrane-flanked domain
BCJMU39_1028	COG3428	Bacterial PH domain
BCJMU39_1035	COG3402	PFAM membrane-flanked domain
BCJMU39_1036	COG3428	Bacterial PH domain
BCJMU39_1037	COG2329	Antibiotic biosynthesis monooxygenase
BCJMU39_1038	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
BCJMU39_1041	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
BCJMU39_1046	COG1309	transcriptional regulator
BCJMU39_1047	COG1511	domain protein
BCJMU39_1053	COG2378	regulation of single-species biofilm formation
BCJMU39_1054	COG1609	Transcriptional regulator
BCJMU39_1056	COG1234	tRNA 3'-trailer cleavage
BCJMU39_1057	COG0095	Lipoate-protein ligase
BCJMU39_1058	COG3328	transposase activity
BCJMU39_1059	COG2205	protein histidine kinase activity
BCJMU39_1060	COG0745	RESPONSE REGULATOR receiver
BCJMU39_1065	COG0501	Belongs to the peptidase M48B family
BCJMU39_1066	COG0697	spore germination
BCJMU39_1070	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
BCJMU39_1071	COG2224	Isocitrate lyase
BCJMU39_1073	COG1278	Cold shock
BCJMU39_1076	COG4903	ComK protein
BCJMU39_1078	COG4585	Histidine kinase
BCJMU39_1079	COG2197	response regulator
BCJMU39_1082	COG0398	Pfam SNARE associated Golgi protein
BCJMU39_1097	COG0179	Fumarylacetoacetate (FAA) hydrolase
BCJMU39_1102	COG0367	asparagine synthase
BCJMU39_1103	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
BCJMU39_1104	COG0753	catalase activity
BCJMU39_1106	COG0004	ammonium transporteR
BCJMU39_1112	COG2996	Protein conserved in bacteria
BCJMU39_1113	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
BCJMU39_1115	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BCJMU39_1118	COG0561	phosphatase activity
BCJMU39_1120	COG0542	response to heat
BCJMU39_1122	COG2267	carboxylic ester hydrolase activity
BCJMU39_1125	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
BCJMU39_1126	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
BCJMU39_1127	COG5504	Zn-dependent protease
BCJMU39_1129	COG0180	Tryptophanyl-tRNA synthetase
BCJMU39_1130	COG4166	transmembrane transport
BCJMU39_1131	COG0601	transmembrane transport
BCJMU39_1132	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BCJMU39_1133	COG0444	Belongs to the ABC transporter superfamily
BCJMU39_1134	COG4608	Belongs to the ABC transporter superfamily
BCJMU39_1135	COG0534	Mate efflux family protein
BCJMU39_1136	COG4166	transmembrane transport
BCJMU39_1140	COG0861	Integral membrane protein TerC family
BCJMU39_1141	COG4862	establishment of competence for transformation
BCJMU39_1142	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BCJMU39_1144	COG1164	Oligoendopeptidase f
BCJMU39_1147	COG2346	COG2346, Truncated hemoglobins
BCJMU39_1148	COG4116	CYTH
BCJMU39_1150	COG2357	RelA SpoT domain protein
BCJMU39_1152	COG0564	pseudouridine synthase activity
BCJMU39_1155	COG0772	Belongs to the SEDS family
BCJMU39_1156	COG1216	Glycosyl transferase, family 2
BCJMU39_1160	COG0457	Tetratricopeptide repeat
BCJMU39_1160	COG0463	Glycosyl transferase, family 2
BCJMU39_1164	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
BCJMU39_1167	COG1091	dTDP-4-dehydrorhamnose reductase activity
BCJMU39_1176	COG2153	protein acetylation
BCJMU39_1178	COG2382	esterase
BCJMU39_1181	COG5492	domain, Protein
BCJMU39_1182	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
BCJMU39_1184	COG0512	Glutamine amidotransferase of anthranilate synthase
BCJMU39_1184	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
BCJMU39_1191	COG1620	l-lactate permease
BCJMU39_1192	COG5634	Uncharacterized conserved protein (DUF2278)
BCJMU39_1205	COG0508	dehydrogenase complex catalyzes the overall conversion of
BCJMU39_1207	COG1476	TRANSCRIPTIONal
BCJMU39_1215	COG2226	methyltransferase
BCJMU39_1217	COG1686	Belongs to the peptidase S11 family
BCJMU39_1218	COG0681	Belongs to the peptidase S26 family
BCJMU39_1222	COG1396	sequence-specific DNA binding
BCJMU39_1225	COG1012	belongs to the aldehyde dehydrogenase family
BCJMU39_1227	COG1176	ABC-type spermidine putrescine transport system, permease component I
BCJMU39_1228	COG1177	transmembrane transport
BCJMU39_1229	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
BCJMU39_1231	COG2409	Drug exporters of the RND superfamily
BCJMU39_1233	COG0564	pseudouridine synthase activity
BCJMU39_1235	COG2340	Cysteine-rich secretory protein family
BCJMU39_1236	COG0247	lactate metabolic process
BCJMU39_1237	COG0277	FAD linked oxidase domain protein
BCJMU39_1238	COG3835	regulator
BCJMU39_1240	COG0745	RESPONSE REGULATOR receiver
BCJMU39_1241	COG5002	protein histidine kinase activity
BCJMU39_1242	COG2186	Transcriptional regulator
BCJMU39_1246	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
BCJMU39_1248	COG2116	formate transmembrane transporter activity
BCJMU39_1249	COG0861	Integral membrane protein TerC family
BCJMU39_1250	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
BCJMU39_1252	COG2030	dehydratase
BCJMU39_1256	COG1028	Short-chain dehydrogenase reductase Sdr
BCJMU39_1257	COG3243	poly(R)-hydroxyalkanoic acid synthase
BCJMU39_1258	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BCJMU39_1259	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
BCJMU39_1262	COG1840	ABC-type Fe3 transport system, periplasmic component
BCJMU39_1263	COG3842	ATPase activity
BCJMU39_1268	COG1349	DNA-binding transcription factor activity
BCJMU39_1271	COG0235	Class ii aldolase
BCJMU39_1273	COG2861	carbohydrate metabolic process
BCJMU39_1275	COG3852	Histidine kinase
BCJMU39_1276	COG1846	Transcriptional regulator
BCJMU39_1278	COG2318	DinB family
BCJMU39_1279	COG5002	protein histidine kinase activity
BCJMU39_1281	COG0720	synthase
BCJMU39_1284	COG4873	Protein conserved in bacteria
BCJMU39_1290	COG1780	Probably involved in ribonucleotide reductase function
BCJMU39_1291	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
BCJMU39_1292	COG1403	HNH endonuclease
BCJMU39_1293	COG1372	Participates in initiation and elongation during chromosome replication
BCJMU39_1293	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
BCJMU39_1294	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
BCJMU39_1295	COG1725	Transcriptional regulator
BCJMU39_1296	COG1131	(ABC) transporter
BCJMU39_1298	COG1131	(ABC) transporter
BCJMU39_1299	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
BCJMU39_1302	COG1522	sequence-specific DNA binding
BCJMU39_1304	COG1335	isochorismatase
BCJMU39_1306	COG1619	proteins homologs of microcin C7 resistance protein MccF
BCJMU39_1307	COG2070	2-Nitropropane dioxygenase
BCJMU39_1308	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
BCJMU39_1310	COG1696	Membrane protein involved in D-alanine export
BCJMU39_1315	COG0716	FMN binding
BCJMU39_1318	COG3173	Aminoglycoside phosphotransferase
BCJMU39_1322	COG0534	Mate efflux family protein
BCJMU39_1323	COG1968	undecaprenyl-diphosphatase activity
BCJMU39_1326	COG1846	Transcriptional regulator
BCJMU39_1328	COG1301	dicarboxylic acid transport
BCJMU39_1329	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
BCJMU39_1330	COG4709	membrane
BCJMU39_1331	COG3874	Sporulation protein YtfJ
BCJMU39_1335	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
BCJMU39_1336	COG0028	Belongs to the TPP enzyme family
BCJMU39_1337	COG0440	acetolactate synthase activity
BCJMU39_1352	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
BCJMU39_1355	COG1183	phosphatidylcholine synthase activity
BCJMU39_1356	COG1368	sulfuric ester hydrolase activity
BCJMU39_1358	COG0019	diaminopimelate decarboxylase activity
BCJMU39_1362	COG0529	Catalyzes the synthesis of activated sulfate
BCJMU39_1363	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
BCJMU39_1367	COG1648	precorrin-2 dehydrogenase activity
BCJMU39_1368	COG0733	neurotransmitter:sodium symporter activity
BCJMU39_1372	COG1757	Na H antiporter
BCJMU39_1375	COG4758	membrane
BCJMU39_1376	COG4585	Histidine kinase
BCJMU39_1377	COG2197	response regulator
BCJMU39_1379	COG1114	Component of the transport system for branched-chain amino acids
BCJMU39_1381	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
BCJMU39_1389	COG0730	response to heat
BCJMU39_1390	COG0306	phosphate transporter
BCJMU39_1391	COG1392	Phosphate transport regulator
BCJMU39_1392	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
BCJMU39_1395	COG3852	Histidine kinase
BCJMU39_1396	COG1801	Protein of unknown function DUF72
BCJMU39_1398	COG2801	Transposase and inactivated derivatives
BCJMU39_1400	COG0582	viral genome integration into host DNA
BCJMU39_1401	COG5002	protein histidine kinase activity
BCJMU39_1405	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
BCJMU39_1405	COG0392	lysyltransferase activity
BCJMU39_1408	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
BCJMU39_1409	COG1686	Belongs to the peptidase S11 family
BCJMU39_1410	COG2715	membrane protein required for spore maturation
BCJMU39_1411	COG0700	Nucleoside recognition
BCJMU39_1412	COG1187	pseudouridine synthase activity
BCJMU39_1414	COG1333	cytochrome c biogenesis protein
BCJMU39_1415	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
BCJMU39_1416	COG0745	RESPONSE REGULATOR receiver
BCJMU39_1417	COG5002	protein histidine kinase activity
BCJMU39_1418	COG2096	Adenosyltransferase
BCJMU39_1419	COG4942	peptidase
BCJMU39_1421	COG3601	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
BCJMU39_1422	COG1141	Ferredoxin
BCJMU39_1424	COG0514	ATP-dependent DNA helicase (RecQ)
BCJMU39_1425	COG1266	CAAX protease self-immunity
BCJMU39_1427	COG1408	metallophosphoesterase
BCJMU39_1429	COG4862	establishment of competence for transformation
BCJMU39_1430	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
BCJMU39_1434	COG0492	ferredoxin-NADP+ reductase activity
BCJMU39_1449	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
BCJMU39_1452	COG0142	geranyltranstransferase activity
BCJMU39_1454	COG0142	geranyltranstransferase activity
BCJMU39_1459	COG0457	Tetratricopeptide repeat
BCJMU39_1463	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
BCJMU39_1465	COG4347	Protein of unknown function (DUF1405)
BCJMU39_1468	COG2738	Putative neutral zinc metallopeptidase
BCJMU39_1470	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BCJMU39_1471	COG1694	Mazg nucleotide pyrophosphohydrolase
BCJMU39_1474	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
BCJMU39_1475	COG0438	transferase activity, transferring glycosyl groups
BCJMU39_1483	COG1199	ATP-dependent helicase activity
BCJMU39_1483	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
BCJMU39_1487	COG3935	DnaD domain protein
BCJMU39_1488	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
BCJMU39_1490	COG4499	WXG100 protein secretion system (Wss), protein YukC
BCJMU39_1490	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
BCJMU39_1501	COG0116	Belongs to the methyltransferase superfamily
BCJMU39_1503	COG1199	ATP-dependent helicase activity
BCJMU39_1504	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
BCJMU39_1506	COG3173	Aminoglycoside phosphotransferase
BCJMU39_1507	COG0024	Methionine aminopeptidase
BCJMU39_1509	COG2233	PERMEase
BCJMU39_1510	COG2311	Membrane
BCJMU39_1512	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
BCJMU39_1514	COG0456	acetyltransferase
BCJMU39_1520	COG0754	glutathionylspermidine amidase activity
BCJMU39_1523	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
BCJMU39_1526	COG0454	-acetyltransferase
BCJMU39_1530	COG0328	RNA-DNA hybrid ribonuclease activity
BCJMU39_1537	COG3403	YqcI/YcgG family
BCJMU39_1538	COG1280	lysine exporter protein (LysE YggA)
BCJMU39_1542	COG3162	membrane
BCJMU39_1543	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
BCJMU39_1544	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
BCJMU39_1546	COG0475	glutathione-regulated potassium exporter activity
BCJMU39_1547	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
BCJMU39_1548	COG4978	Transcriptional regulator
BCJMU39_1548	COG0789	Transcriptional regulator
BCJMU39_1550	COG2323	membrane
BCJMU39_1551	COG1434	Gram-negative-bacterium-type cell wall biogenesis
BCJMU39_1558	COG2814	Major facilitator Superfamily
BCJMU39_1564	COG1923	regulation of RNA biosynthetic process
BCJMU39_1566	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
BCJMU39_1567	COG1360	Flagellar Motor Protein
BCJMU39_1568	COG2201	protein-glutamate methylesterase activity
BCJMU39_1569	COG2198	Histidine kinase
BCJMU39_1569	COG0643	Histidine kinase
BCJMU39_1570	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
BCJMU39_1570	COG1776	CheC inhibitor of MCP methylation
BCJMU39_1573	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
BCJMU39_1577	COG1256	bacterial-type flagellum assembly
BCJMU39_1578	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
BCJMU39_1579	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
BCJMU39_1582	COG1815	bacterial-type flagellum-dependent cell motility
BCJMU39_1583	COG1558	bacterial-type flagellum-dependent cell motility
BCJMU39_1585	COG1766	The M ring may be actively involved in energy transduction
BCJMU39_1586	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
BCJMU39_1588	COG1157	protein secretion by the type III secretion system
BCJMU39_1596	COG0835	chemotaxis
BCJMU39_1596	COG0784	Response regulator, receiver
BCJMU39_1598	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
BCJMU39_1600	COG0741	lytic transglycosylase activity
BCJMU39_1602	COG1868	FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
BCJMU39_1603	COG1776	CheC inhibitor of MCP methylation
BCJMU39_1603	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
BCJMU39_1605	COG1338	Plays a role in the flagellum-specific transport system
BCJMU39_1606	COG1987	bacterial-type flagellum assembly
BCJMU39_1608	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
BCJMU39_1609	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
BCJMU39_1610	COG1419	protein localization to endoplasmic reticulum
BCJMU39_1611	COG4786	Flagellar basal body rod
BCJMU39_1612	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
BCJMU39_1617	COG1309	transcriptional regulator
BCJMU39_1620	COG2329	Antibiotic biosynthesis monooxygenase
BCJMU39_1623	COG3764	Sortase (surface protein transpeptidase)
BCJMU39_1624	COG3764	Sortase (surface protein transpeptidase)
BCJMU39_1629	COG0583	DNA-binding transcription factor activity
BCJMU39_1630	COG3842	ATPase activity
BCJMU39_1631	COG0725	ABC transporter, periplasmic molybdate-binding protein
BCJMU39_1632	COG1178	ABC-type Fe3 transport system permease component
BCJMU39_1634	COG1234	tRNA 3'-trailer cleavage
BCJMU39_1637	COG1028	Short-chain dehydrogenase reductase Sdr
BCJMU39_1640	COG0406	alpha-ribazole phosphatase activity
BCJMU39_1644	COG1846	Transcriptional regulator
BCJMU39_1646	COG0367	asparagine synthase
BCJMU39_1652	COG1802	Transcriptional regulator
BCJMU39_1653	COG0697	spore germination
BCJMU39_1654	COG0523	cobalamin synthesis protein
BCJMU39_1656	COG0701	Predicted permease
BCJMU39_1659	COG1757	Na H antiporter
BCJMU39_1660	COG0114	fumarate hydratase activity
BCJMU39_1665	COG0534	Mate efflux family protein
BCJMU39_1666	COG3340	Belongs to the peptidase S51 family
BCJMU39_1670	COG0785	Cytochrome C biogenesis protein
BCJMU39_1677	COG2733	membrane
BCJMU39_1684	COG1131	(ABC) transporter
BCJMU39_1687	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BCJMU39_1692	COG0528	UMP kinase activity
BCJMU39_1694	COG1027	Aspartate ammonia-lyase
BCJMU39_1695	COG0281	malic enzyme
BCJMU39_1696	COG4191	Histidine kinase
BCJMU39_1697	COG0784	Response regulator, receiver
BCJMU39_1699	COG1361	Conserved repeat domain
BCJMU39_1700	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
BCJMU39_1710	COG2814	Major facilitator Superfamily
BCJMU39_1713	COG1966	Carbon starvation protein
BCJMU39_1715	COG1695	Transcriptional regulator
BCJMU39_1717	COG0477	Major facilitator Superfamily
BCJMU39_1718	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
BCJMU39_1719	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
BCJMU39_1720	COG4166	transmembrane transport
BCJMU39_1721	COG2223	nitrite transmembrane transporter activity
BCJMU39_1722	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
BCJMU39_1725	COG2244	polysaccharide biosynthetic process
BCJMU39_1726	COG0733	neurotransmitter:sodium symporter activity
BCJMU39_1728	COG5566	PFAM Mor transcription activator
BCJMU39_1730	COG2323	membrane
BCJMU39_1732	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
BCJMU39_1734	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
BCJMU39_1735	COG0028	Belongs to the TPP enzyme family
BCJMU39_1737	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
BCJMU39_1739	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
BCJMU39_1744	COG2814	Major facilitator Superfamily
BCJMU39_1745	COG3384	dioxygenase
BCJMU39_1747	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
BCJMU39_1749	COG0427	acetyl-CoA hydrolase
BCJMU39_1753	COG1073	alpha beta
BCJMU39_1754	COG4166	transmembrane transport
BCJMU39_1759	COG0535	radical SAM domain protein
BCJMU39_1760	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BCJMU39_1765	COG1914	H( )-stimulated, divalent metal cation uptake system
BCJMU39_1768	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
BCJMU39_1770	COG0531	amino acid
BCJMU39_1776	COG0714	Associated with various cellular activities
BCJMU39_1778	COG3552	Protein containing von Willebrand factor type A (VWA) domain
BCJMU39_1783	COG2390	Transcriptional regulator
BCJMU39_1785	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
BCJMU39_1786	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
BCJMU39_1788	COG4846	Membrane protein involved in cytochrome C biogenesis
BCJMU39_1792	COG0006	proline dipeptidase activity
BCJMU39_1793	COG2132	Multicopper oxidase
BCJMU39_1796	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
BCJMU39_1802	COG1114	Component of the transport system for branched-chain amino acids
BCJMU39_1804	COG2372	response to copper ion
BCJMU39_1804	COG1276	copper resistance
BCJMU39_1805	COG4549	nuclear export factor GLE1
BCJMU39_1807	COG0697	spore germination
BCJMU39_1808	COG0583	DNA-binding transcription factor activity
BCJMU39_1809	COG1959	2 iron, 2 sulfur cluster binding
BCJMU39_1810	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
BCJMU39_1811	COG0778	Nitroreductase
BCJMU39_1814	COG0628	permease
BCJMU39_1816	COG1231	oxidoreductase activity
BCJMU39_1817	COG0523	cobalamin synthesis protein
BCJMU39_1819	COG0318	PFAM AMP-dependent synthetase and ligase
BCJMU39_1820	COG2030	dehydratase
BCJMU39_1821	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
BCJMU39_1823	COG0411	ABC transporter
BCJMU39_1827	COG0583	DNA-binding transcription factor activity
BCJMU39_1833	COG1271	oxidase subunit
BCJMU39_1834	COG1294	oxidase, subunit
BCJMU39_1835	COG4988	ABC transporter
BCJMU39_1836	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
BCJMU39_1840	COG1686	Belongs to the peptidase S11 family
BCJMU39_1843	COG1388	LysM domain
BCJMU39_1843	COG0791	NLP P60 protein
BCJMU39_1845	COG1132	(ABC) transporter
BCJMU39_1846	COG0745	RESPONSE REGULATOR receiver
BCJMU39_1847	COG5002	protein histidine kinase activity
BCJMU39_1848	COG2205	protein histidine kinase activity
BCJMU39_1849	COG0745	RESPONSE REGULATOR receiver
BCJMU39_1854	COG0300	oxidoreductase activity
BCJMU39_1855	COG4122	O-methyltransferase activity
BCJMU39_1858	COG5658	integral membrane protein
BCJMU39_1862	COG0460	homoserine dehydrogenase
BCJMU39_1867	COG1316	TRANSCRIPTIONal
BCJMU39_1869	COG0745	RESPONSE REGULATOR receiver
BCJMU39_1870	COG5002	protein histidine kinase activity
BCJMU39_1873	COG1285	pathogenesis
BCJMU39_1874	COG1247	-acetyltransferase
BCJMU39_1878	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
BCJMU39_1880	COG1082	Xylose isomerase domain protein TIM barrel
BCJMU39_1882	COG2814	Major facilitator Superfamily
BCJMU39_1883	COG1279	arginine transmembrane transporter activity
BCJMU39_1885	COG1752	Esterase of the alpha-beta hydrolase superfamily
BCJMU39_1892	COG0577	efflux transmembrane transporter activity
BCJMU39_1893	COG2002	toxin-antitoxin pair type II binding
BCJMU39_1894	COG1404	Belongs to the peptidase S8 family
BCJMU39_1895	COG0640	Transcriptional regulator
BCJMU39_1896	COG0667	Aldo Keto reductase
BCJMU39_1897	COG2814	Major facilitator Superfamily
BCJMU39_1902	COG0840	transmembrane signaling receptor activity
BCJMU39_1905	COG3949	Membrane
BCJMU39_1906	COG0783	Belongs to the Dps family
BCJMU39_1909	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BCJMU39_1911	COG1231	oxidoreductase activity
BCJMU39_1913	COG4989	oxidoreductase activity
BCJMU39_1914	COG0523	cobalamin synthesis protein
BCJMU39_1915	COG0456	acetyltransferase
BCJMU39_1916	COG0803	Belongs to the bacterial solute-binding protein 9 family
BCJMU39_1916	COG3443	Belongs to the bacterial solute-binding protein 9 family
BCJMU39_1918	COG0702	epimerase
BCJMU39_1920	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
BCJMU39_1922	COG4166	transmembrane transport
BCJMU39_1925	COG0406	alpha-ribazole phosphatase activity
BCJMU39_1927	COG5337	Spore coat protein CotH
BCJMU39_1928	COG1051	belongs to the nudix hydrolase family
BCJMU39_1929	COG0586	Pfam SNARE associated Golgi protein
BCJMU39_1930	COG2244	polysaccharide biosynthetic process
BCJMU39_1932	COG0701	Predicted permease
BCJMU39_1933	COG3689	TIGRFAM TIGR03943 family protein
BCJMU39_1934	COG1607	acyl-coa hydrolase
BCJMU39_1935	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BCJMU39_1938	COG0702	epimerase
BCJMU39_1939	COG2839	Protein conserved in bacteria
BCJMU39_1940	COG1253	flavin adenine dinucleotide binding
BCJMU39_1944	COG1114	Component of the transport system for branched-chain amino acids
BCJMU39_1945	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
BCJMU39_1948	COG0860	N-Acetylmuramoyl-L-alanine amidase
BCJMU39_1950	COG1876	peptidase activity
BCJMU39_1952	COG0154	amidase activity
BCJMU39_1953	COG2211	Major facilitator Superfamily
BCJMU39_1957	COG2368	4-hydroxyphenylacetate
BCJMU39_1959	COG0196	riboflavin kinase activity
BCJMU39_1962	COG0251	oxidation-reduction process
BCJMU39_1964	COG3971	2-oxopent-4-enoate hydratase activity
BCJMU39_1968	COG1942	4-Oxalocrotonate Tautomerase
BCJMU39_1970	COG0561	phosphatase activity
BCJMU39_1973	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
BCJMU39_1974	COG4106	trans-aconitate 2-methyltransferase activity
BCJMU39_1977	COG1819	glycosyl
BCJMU39_1978	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BCJMU39_1979	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BCJMU39_1985	COG0456	acetyltransferase
BCJMU39_1994	COG4499	WXG100 protein secretion system (Wss), protein YukC
BCJMU39_2015	COG3874	Sporulation protein YtfJ
BCJMU39_2020	COG2226	methyltransferase
BCJMU39_2024	COG1082	Xylose isomerase domain protein TIM barrel
BCJMU39_2025	COG0346	lactoylglutathione lyase activity
BCJMU39_2027	COG0604	alcohol dehydrogenase
BCJMU39_2028	COG1595	DNA-templated transcription, initiation
BCJMU39_2034	COG0386	Belongs to the glutathione peroxidase family
BCJMU39_2035	COG1305	Transglutaminase-like
BCJMU39_2037	COG1721	protein (some members contain a von Willebrand factor type A (vWA) domain
BCJMU39_2038	COG0714	Associated with various cellular activities
BCJMU39_2042	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
BCJMU39_2043	COG1140	nitrate reductase beta subunit
BCJMU39_2044	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
BCJMU39_2045	COG2181	nitrate reductase activity
BCJMU39_2046	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
BCJMU39_2047	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
BCJMU39_2048	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
BCJMU39_2049	COG0303	'Molybdopterin
BCJMU39_2050	COG0314	molybdopterin synthase activity
BCJMU39_2052	COG2223	nitrite transmembrane transporter activity
BCJMU39_2054	COG1648	precorrin-2 dehydrogenase activity
BCJMU39_2056	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
BCJMU39_2056	COG1587	Uroporphyrinogen-III synthase
BCJMU39_2057	COG2146	nitrite reductase [NAD(P)H] activity
BCJMU39_2058	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
BCJMU39_2059	COG2846	Di-iron-containing protein involved in the repair of iron-sulfur clusters
BCJMU39_2067	COG2359	stage V sporulation protein S
BCJMU39_2068	COG2801	Transposase and inactivated derivatives
BCJMU39_2073	COG1418	mRNA catabolic process
BCJMU39_2074	COG0488	(ABC) transporter
BCJMU39_2077	COG0629	single-stranded DNA binding
BCJMU39_2080	COG1413	lyase activity
BCJMU39_2083	COG2136	Putative SAM-dependent methyltransferase
BCJMU39_2083	COG2521	methyltransferase
BCJMU39_2090	COG3328	transposase activity
BCJMU39_2096	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
BCJMU39_2097	COG0017	Asparaginyl-tRNA synthetase
BCJMU39_2098	COG1929	Belongs to the glycerate kinase type-1 family
BCJMU39_2099	COG0471	metal ion transport
BCJMU39_2100	COG0745	RESPONSE REGULATOR receiver
BCJMU39_2101	COG5002	protein histidine kinase activity
BCJMU39_2101	COG3850	Histidine kinase
BCJMU39_2104	COG0733	neurotransmitter:sodium symporter activity
BCJMU39_2109	COG2610	gluconate transmembrane transporter activity
BCJMU39_2110	COG1454	alcohol dehydrogenase
BCJMU39_2111	COG1794	racemase activity, acting on amino acids and derivatives
BCJMU39_2113	COG0456	acetyltransferase
BCJMU39_2114	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
BCJMU39_2116	COG1131	(ABC) transporter
BCJMU39_2117	COG4473	ABC transporter
BCJMU39_2119	COG0546	phosphoglycolate phosphatase activity
BCJMU39_2123	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
BCJMU39_2124	COG3250	beta-galactosidase activity
BCJMU39_2127	COG0768	penicillin binding
BCJMU39_2129	COG0204	Acyl-transferase
BCJMU39_2130	COG1272	protein, Hemolysin III
BCJMU39_2132	COG0805	protein transport
BCJMU39_2134	COG1307	EDD domain protein, DegV family
BCJMU39_2136	COG2801	Transposase and inactivated derivatives
BCJMU39_2137	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
BCJMU39_2138	COG1999	signal sequence binding
BCJMU39_2139	COG0071	Belongs to the small heat shock protein (HSP20) family
BCJMU39_2140	COG0367	asparagine synthase
BCJMU39_2143	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
BCJMU39_2144	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
BCJMU39_2148	COG1335	isochorismatase
BCJMU39_2149	COG0071	Belongs to the small heat shock protein (HSP20) family
BCJMU39_2150	COG0668	transmembrane transport
BCJMU39_2151	COG2203	Gaf domain
BCJMU39_2151	COG4585	Histidine kinase
BCJMU39_2152	COG2197	response regulator
BCJMU39_2154	COG1064	alcohol dehydrogenase
BCJMU39_2166	COG0517	IMP dehydrogenase activity
BCJMU39_2166	COG1125	glycine betaine transport
BCJMU39_2167	COG1174	glycine betaine transport
BCJMU39_2170	COG2801	Transposase and inactivated derivatives
BCJMU39_2176	COG1253	flavin adenine dinucleotide binding
BCJMU39_2177	COG1012	belongs to the aldehyde dehydrogenase family
BCJMU39_2178	COG5506	Protein of unknown function (DUF1694)
BCJMU39_2181	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
BCJMU39_2182	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
BCJMU39_2183	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
BCJMU39_2184	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
BCJMU39_2185	COG0456	acetyltransferase
BCJMU39_2186	COG3829	transcription factor binding
BCJMU39_2187	COG1509	lysine 2,3-aminomutase activity
BCJMU39_2194	COG3064	Membrane
BCJMU39_2194	COG0515	serine threonine protein kinase
BCJMU39_2194	COG4991	sh3 domain protein
BCJMU39_2195	COG4326	sporulation control protein
BCJMU39_2196	COG0671	phosphoesterase, PA-phosphatase related
BCJMU39_2201	COG0456	acetyltransferase
BCJMU39_2201	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
BCJMU39_2205	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
BCJMU39_2206	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
BCJMU39_2218	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
BCJMU39_2224	COG0300	oxidoreductase activity
BCJMU39_2228	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
BCJMU39_2228	COG4499	WXG100 protein secretion system (Wss), protein YukC
BCJMU39_2230	COG4841	protein insertion into membrane
BCJMU39_2231	COG0372	Belongs to the citrate synthase family
BCJMU39_2232	COG2079	MmgE PrpD family protein
BCJMU39_2233	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
BCJMU39_2234	COG1960	acyl-CoA dehydrogenase activity
BCJMU39_2235	COG2084	Dehydrogenase
BCJMU39_2237	COG1280	lysine exporter protein (LysE YggA)
BCJMU39_2238	COG1024	Enoyl-CoA hydratase
BCJMU39_2241	COG0420	3'-5' exonuclease activity
BCJMU39_2247	COG2223	nitrite transmembrane transporter activity
BCJMU39_2248	COG1028	Short-chain dehydrogenase reductase Sdr
BCJMU39_2249	COG1169	isochorismate synthase
BCJMU39_2250	COG1021	2,3-dihydroxybenzoate-AMP ligase
BCJMU39_2251	COG1535	isochorismatase
BCJMU39_2251	COG3433	isochorismatase activity
BCJMU39_2252	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
BCJMU39_2253	COG3251	PFAM MbtH domain protein
BCJMU39_2254	COG2814	Major facilitator Superfamily
BCJMU39_2257	COG0776	regulation of translation
BCJMU39_2259	COG2318	DinB family
BCJMU39_2261	COG1115	amino acid carrier protein
BCJMU39_2264	COG2329	Antibiotic biosynthesis monooxygenase
BCJMU39_2265	COG1187	pseudouridine synthase activity
BCJMU39_2266	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
BCJMU39_2267	COG1136	(ABC) transporter
BCJMU39_2270	COG0596	Alpha beta hydrolase
BCJMU39_2272	COG2814	Major facilitator Superfamily
BCJMU39_2285	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BCJMU39_2292	COG1247	-acetyltransferase
BCJMU39_2298	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
BCJMU39_2300	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BCJMU39_2302	COG1278	Cold shock
BCJMU39_2305	COG0010	Belongs to the arginase family
BCJMU39_2307	COG1846	Transcriptional regulator
BCJMU39_2308	COG2814	Major facilitator Superfamily
BCJMU39_2309	COG0583	DNA-binding transcription factor activity
BCJMU39_2310	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
BCJMU39_2313	COG0583	DNA-binding transcription factor activity
BCJMU39_2314	COG2258	MOSC domain
BCJMU39_2318	COG1132	(ABC) transporter
BCJMU39_2319	COG1132	(ABC) transporter
BCJMU39_2323	COG1396	sequence-specific DNA binding
BCJMU39_2329	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
BCJMU39_2331	COG3075	Conversion of glycerol 3-phosphate to dihydroxyacetone. Uses fumarate or nitrate as electron acceptor
BCJMU39_2332	COG1595	DNA-templated transcription, initiation
BCJMU39_2337	COG1649	PFAM Uncharacterised BCR, COG1649
BCJMU39_2342	COG2971	BadF BadG BcrA BcrD
BCJMU39_2344	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
BCJMU39_2348	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BCJMU39_2354	COG1309	transcriptional regulator
BCJMU39_2357	COG0577	efflux transmembrane transporter activity
BCJMU39_2357	COG1136	(ABC) transporter
BCJMU39_2364	COG2801	Transposase and inactivated derivatives
BCJMU39_2370	COG1846	Transcriptional regulator
BCJMU39_2376	COG2195	Cleaves the N-terminal amino acid of tripeptides
BCJMU39_2378	COG0110	maltose O-acetyltransferase activity
BCJMU39_2380	COG1686	Belongs to the peptidase S11 family
BCJMU39_2382	COG0768	penicillin binding
BCJMU39_2384	COG1595	DNA-templated transcription, initiation
BCJMU39_2386	COG0768	penicillin binding
BCJMU39_2387	COG0768	penicillin binding
BCJMU39_2388	COG2367	Beta-lactamase
BCJMU39_2389	COG1408	metallophosphoesterase
BCJMU39_2391	COG1131	(ABC) transporter
BCJMU39_2393	COG1309	transcriptional regulator
BCJMU39_2396	COG1960	acyl-CoA dehydrogenase activity
BCJMU39_2397	COG0439	Biotin carboxylase
BCJMU39_2398	COG0511	ligase activity, forming carbon-carbon bonds
BCJMU39_2399	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
BCJMU39_2400	COG1024	Enoyl-CoA hydratase
BCJMU39_2401	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
BCJMU39_2402	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
BCJMU39_2404	COG1247	-acetyltransferase
BCJMU39_2405	COG0572	uridine kinase
BCJMU39_2406	COG1686	Belongs to the peptidase S11 family
BCJMU39_2412	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
BCJMU39_2417	COG3227	Zinc metalloprotease (Elastase)
BCJMU39_2420	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
BCJMU39_2426	COG2814	Major facilitator Superfamily
BCJMU39_2428	COG2226	methyltransferase
BCJMU39_2436	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BCJMU39_2446	COG3386	PFAM SMP-30 Gluconolaconase
BCJMU39_2448	COG1384	Belongs to the class-I aminoacyl-tRNA synthetase family
BCJMU39_2449	COG3773	Cell wall hydrolase
BCJMU39_2451	COG0745	RESPONSE REGULATOR receiver
BCJMU39_2452	COG2205	protein histidine kinase activity
BCJMU39_2454	COG0488	(ABC) transporter
BCJMU39_2456	COG1136	(ABC) transporter
BCJMU39_2457	COG0577	efflux transmembrane transporter activity
BCJMU39_2462	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BCJMU39_2464	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
BCJMU39_2488	COG2124	cytochrome p450
BCJMU39_2496	COG0561	phosphatase activity
BCJMU39_2497	COG5002	protein histidine kinase activity
BCJMU39_2498	COG0768	penicillin binding
BCJMU39_2500	COG1819	glycosyl
BCJMU39_2501	COG1794	racemase activity, acting on amino acids and derivatives
BCJMU39_2505	COG2205	protein histidine kinase activity
BCJMU39_2507	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
BCJMU39_2508	COG0604	alcohol dehydrogenase
BCJMU39_2509	COG0671	phosphoesterase, PA-phosphatase related
BCJMU39_2510	COG0768	penicillin binding
BCJMU39_2512	COG1028	Short-chain dehydrogenase reductase Sdr
BCJMU39_2514	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
BCJMU39_2521	COG0693	protein deglycase activity
BCJMU39_2527	COG2814	Major facilitator Superfamily
BCJMU39_2530	COG0584	glycerophosphoryl diester phosphodiesterase
BCJMU39_2534	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BCJMU39_2535	COG0697	spore germination
BCJMU39_2539	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
BCJMU39_2541	COG2223	nitrite transmembrane transporter activity
BCJMU39_2544	COG2816	NAD+ diphosphatase activity
BCJMU39_2545	COG0592	DNA-directed DNA polymerase activity
BCJMU39_2546	COG1051	belongs to the nudix hydrolase family
BCJMU39_2552	COG3878	Protein conserved in bacteria
BCJMU39_2557	COG4667	esterase of the alpha-beta hydrolase superfamily
BCJMU39_2563	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
BCJMU39_2566	COG0322	excinuclease ABC activity
BCJMU39_2575	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BCJMU39_2580	COG1011	Hydrolase
BCJMU39_2584	COG1523	belongs to the glycosyl hydrolase 13 family
BCJMU39_2585	COG3227	Zinc metalloprotease (Elastase)
BCJMU39_2589	COG0201	protein transport
BCJMU39_2591	COG0697	spore germination
BCJMU39_2592	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BCJMU39_2599	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BCJMU39_2602	COG2959	enzyme of heme biosynthesis
BCJMU39_2608	COG3844	kynureninase activity
BCJMU39_2609	COG1309	transcriptional regulator
BCJMU39_2615	COG3284	Transcriptional regulator
BCJMU39_2619	COG1349	DNA-binding transcription factor activity
BCJMU39_2622	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
BCJMU39_2623	COG0508	dehydrogenase complex catalyzes the overall conversion of
BCJMU39_2624	COG0022	dehydrogenase e1 component
BCJMU39_2625	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
BCJMU39_2627	COG1028	Short-chain dehydrogenase reductase Sdr
BCJMU39_2631	COG1051	belongs to the nudix hydrolase family
BCJMU39_2634	COG4176	ABC-type proline glycine betaine transport system permease component
BCJMU39_2635	COG0517	IMP dehydrogenase activity
BCJMU39_2635	COG4175	Glycine betaine
BCJMU39_2640	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
BCJMU39_2641	COG2153	protein acetylation
BCJMU39_2642	COG3397	chitin binding
BCJMU39_2646	COG2205	protein histidine kinase activity
BCJMU39_2647	COG2226	methyltransferase
BCJMU39_2648	COG2315	Protein conserved in bacteria
BCJMU39_2649	COG2153	protein acetylation
BCJMU39_2650	COG0658	competence protein
BCJMU39_2650	COG2333	competence protein COMEC
BCJMU39_2660	COG3973	AAA domain
BCJMU39_2664	COG0514	ATP-dependent DNA helicase (RecQ)
BCJMU39_2669	COG4637	Psort location Cytoplasmic, score
BCJMU39_2674	COG3397	chitin binding
BCJMU39_2676	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
BCJMU39_2677	COG1115	amino acid carrier protein
BCJMU39_2678	COG1012	belongs to the aldehyde dehydrogenase family
BCJMU39_2679	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
BCJMU39_2681	COG3938	Belongs to the proline racemase family
BCJMU39_2682	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BCJMU39_2690	COG0586	Pfam SNARE associated Golgi protein
BCJMU39_2693	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
BCJMU39_2694	COG0519	Catalyzes the synthesis of GMP from XMP
BCJMU39_2695	COG4166	transmembrane transport
BCJMU39_2697	COG4948	Mandelate Racemase Muconate Lactonizing
BCJMU39_2704	COG2936	dipeptidyl-peptidase activity
BCJMU39_2705	COG5002	protein histidine kinase activity
BCJMU39_2706	COG0745	RESPONSE REGULATOR receiver
BCJMU39_2713	COG1164	Oligoendopeptidase f
BCJMU39_2714	COG0531	amino acid
BCJMU39_2715	COG1522	sequence-specific DNA binding
BCJMU39_2716	COG1307	EDD domain protein, DegV family
BCJMU39_2719	COG2801	Transposase and inactivated derivatives
BCJMU39_2727	COG2814	Major facilitator Superfamily
BCJMU39_2729	COG1664	Polymer-forming cytoskeletal
BCJMU39_2730	COG0789	Transcriptional regulator
BCJMU39_2731	COG4533	DNA binding
BCJMU39_2732	COG0477	Major facilitator Superfamily
BCJMU39_2732	COG2814	Major facilitator Superfamily
BCJMU39_2736	COG2261	transglycosylase associated protein
BCJMU39_2740	COG2226	methyltransferase
BCJMU39_2746	COG0436	Aminotransferase
BCJMU39_2747	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
BCJMU39_2748	COG5146	pantothenate kinase activity
BCJMU39_2749	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
BCJMU39_2752	COG1131	(ABC) transporter
BCJMU39_2762	COG0628	permease
BCJMU39_2764	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BCJMU39_2765	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
BCJMU39_2766	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
BCJMU39_2769	COG2816	NAD+ diphosphatase activity
BCJMU39_2773	COG2746	aminoglycoside 3-N-acetyltransferase activity
BCJMU39_2778	COG0697	spore germination
BCJMU39_2779	COG2318	DinB family
BCJMU39_2780	COG0454	-acetyltransferase
BCJMU39_2783	COG4912	Dna alkylation repair
BCJMU39_2787	COG0861	Integral membrane protein TerC family
BCJMU39_2788	COG1368	sulfuric ester hydrolase activity
BCJMU39_2789	COG0488	(ABC) transporter
BCJMU39_2791	COG2409	Drug exporters of the RND superfamily
BCJMU39_2791	COG1033	growth of symbiont in host cell
BCJMU39_2792	COG1309	transcriptional regulator
BCJMU39_2796	COG0287	Prephenate dehydrogenase
BCJMU39_2797	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
BCJMU39_2799	COG1605	Chorismate mutase
BCJMU39_2799	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
BCJMU39_2806	COG1388	LysM domain
BCJMU39_2806	COG3584	3D domain protein
BCJMU39_2808	COG1595	DNA-templated transcription, initiation
BCJMU39_2813	COG1879	ABC-type sugar transport system periplasmic component
BCJMU39_2815	COG1172	Belongs to the binding-protein-dependent transport system permease family
BCJMU39_2825	COG2390	Transcriptional regulator
BCJMU39_2826	COG1070	Carbohydrate kinase
BCJMU39_2832	COG2329	Antibiotic biosynthesis monooxygenase
BCJMU39_2836	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
BCJMU39_2839	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
BCJMU39_2840	COG4187	Peptidase family M20/M25/M40
BCJMU39_2841	COG1414	Transcriptional regulator
BCJMU39_2842	COG0833	amino acid
BCJMU39_2843	COG1690	Belongs to the RtcB family
BCJMU39_2845	COG3239	Fatty acid desaturase
BCJMU39_2846	COG1785	Belongs to the alkaline phosphatase family
BCJMU39_2848	COG3655	Transcriptional regulator
BCJMU39_2851	COG4377	Putative membrane peptidase family (DUF2324)
BCJMU39_2853	COG3279	Response regulator of the LytR AlgR family
BCJMU39_2855	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BCJMU39_2856	COG0346	lactoylglutathione lyase activity
BCJMU39_2861	COG0714	Associated with various cellular activities
BCJMU39_2866	COG0463	Glycosyl transferase, family 2
BCJMU39_2870	COG0463	Glycosyl transferase, family 2
BCJMU39_2872	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
BCJMU39_2873	COG0753	catalase activity
BCJMU39_2875	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
BCJMU39_2877	COG1280	lysine exporter protein (LysE YggA)
BCJMU39_2882	COG0714	Associated with various cellular activities
BCJMU39_2908	COG0778	Nitroreductase
BCJMU39_2909	COG1846	Transcriptional regulator
BCJMU39_2916	COG1725	Transcriptional regulator
BCJMU39_2920	COG1136	(ABC) transporter
BCJMU39_2920	COG0577	efflux transmembrane transporter activity
BCJMU39_2925	COG2207	Transcriptional regulator
BCJMU39_2926	COG0456	acetyltransferase
BCJMU39_2929	COG0697	spore germination
BCJMU39_2930	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BCJMU39_2939	COG0730	response to heat
BCJMU39_2941	COG0833	amino acid
BCJMU39_2943	COG4335	DNA alkylation repair
BCJMU39_2950	COG0768	penicillin binding
BCJMU39_2957	COG1984	allophanate hydrolase subunit 2
BCJMU39_2958	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
BCJMU39_2959	COG1414	Transcriptional regulator
BCJMU39_2963	COG0860	N-Acetylmuramoyl-L-alanine amidase
BCJMU39_2964	COG0640	Transcriptional regulator
BCJMU39_2966	COG1960	acyl-CoA dehydrogenase activity
BCJMU39_2969	COG3314	Sporulation integral membrane protein YlbJ
BCJMU39_2974	COG0574	Belongs to the PEP-utilizing enzyme family
BCJMU39_2974	COG3848	Pyruvate phosphate dikinase
BCJMU39_2975	COG1819	glycosyl
BCJMU39_2976	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BCJMU39_2980	COG5577	PFAM Coat F domain
BCJMU39_2981	COG3403	YqcI/YcgG family
BCJMU39_2982	COG1280	lysine exporter protein (LysE YggA)
BCJMU39_2983	COG1113	amino acid transport
BCJMU39_2989	COG1063	alcohol dehydrogenase
BCJMU39_2996	COG4974	Belongs to the 'phage' integrase family
BCJMU39_2999	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
BCJMU39_3013	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
BCJMU39_3014	COG0753	catalase activity
BCJMU39_3015	COG0598	Magnesium transport protein CorA
BCJMU39_3022	COG0415	Belongs to the DNA photolyase family
BCJMU39_3023	COG0288	reversible hydration of carbon dioxide
BCJMU39_3025	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
BCJMU39_3026	COG5609	conserved protein (DUF2294)
BCJMU39_3029	COG0714	Associated with various cellular activities
BCJMU39_3030	COG1575	Belongs to the MenA family. Type 1 subfamily
BCJMU39_3032	COG0803	Belongs to the bacterial solute-binding protein 9 family
BCJMU39_3033	COG1108	ABC-type Mn2 Zn2 transport systems permease components
BCJMU39_3034	COG1121	(ABC) transporter
BCJMU39_3037	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BCJMU39_3039	COG0798	PFAM Bile acid sodium symporter
BCJMU39_3040	COG0346	lactoylglutathione lyase activity
BCJMU39_3041	COG0640	Transcriptional regulator
BCJMU39_3043	COG0456	acetyltransferase
BCJMU39_3044	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
BCJMU39_3044	COG3320	Male sterility
BCJMU39_3045	COG1309	transcriptional regulator
BCJMU39_3046	COG1028	Short-chain dehydrogenase reductase Sdr
BCJMU39_3047	COG1522	sequence-specific DNA binding
BCJMU39_3050	COG0346	lactoylglutathione lyase activity
BCJMU39_3057	COG2814	Major facilitator Superfamily
BCJMU39_3062	COG0745	RESPONSE REGULATOR receiver
BCJMU39_3063	COG5002	protein histidine kinase activity
BCJMU39_3063	COG3850	Histidine kinase
BCJMU39_3069	COG2515	1-aminocyclopropane-1-carboxylate deaminase
BCJMU39_3073	COG1476	TRANSCRIPTIONal
BCJMU39_3078	COG0789	Transcriptional regulator
BCJMU39_3079	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
BCJMU39_3082	COG1136	(ABC) transporter
BCJMU39_3083	COG0577	efflux transmembrane transporter activity
BCJMU39_3086	COG5002	protein histidine kinase activity
BCJMU39_3086	COG3850	Histidine kinase
BCJMU39_3088	COG2364	Membrane
BCJMU39_3090	COG1846	Transcriptional regulator
BCJMU39_3091	COG0456	acetyltransferase
BCJMU39_3092	COG2808	Putative FMN-binding domain
BCJMU39_3093	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BCJMU39_3094	COG2271	Major facilitator Superfamily
BCJMU39_3095	COG1556	Lactate utilization protein
BCJMU39_3096	COG1139	Iron-sulfur cluster binding protein
BCJMU39_3098	COG0583	DNA-binding transcription factor activity
BCJMU39_3102	COG1619	proteins homologs of microcin C7 resistance protein MccF
BCJMU39_3105	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
BCJMU39_3109	COG1595	DNA-templated transcription, initiation
BCJMU39_3112	COG0662	Cupin 2, conserved barrel domain protein
BCJMU39_3113	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
BCJMU39_3113	COG2207	Transcriptional regulator
BCJMU39_3117	COG3409	Peptidoglycan-binding domain 1 protein
BCJMU39_3117	COG5632	N-Acetylmuramoyl-L-alanine amidase
BCJMU39_3178	COG4282	regulation of fungal-type cell wall biogenesis
BCJMU39_3194	COG5444	nuclease activity
BCJMU39_3202	COG2373	Large extracellular alpha-helical protein
BCJMU39_3206	COG0477	Major facilitator Superfamily
BCJMU39_3208	COG1846	Transcriptional regulator
BCJMU39_3209	COG2814	Major facilitator Superfamily
BCJMU39_3212	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
BCJMU39_3213	COG1131	(ABC) transporter
BCJMU39_3217	COG2076	Multidrug Resistance protein
BCJMU39_3218	COG1309	transcriptional regulator
BCJMU39_3221	COG1476	TRANSCRIPTIONal
BCJMU39_3224	COG2031	fatty acid transporter
BCJMU39_3226	COG2249	NAD(P)H dehydrogenase (quinone) activity
BCJMU39_3235	COG1122	ATPase activity
BCJMU39_3237	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
BCJMU39_3240	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
BCJMU39_3241	COG1288	antiporter activity
BCJMU39_3243	COG3409	Peptidoglycan-binding domain 1 protein
BCJMU39_3243	COG5632	N-Acetylmuramoyl-L-alanine amidase
BCJMU39_3245	COG3620	sequence-specific DNA binding
BCJMU39_3248	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
BCJMU39_3252	COG1733	regulation of RNA biosynthetic process
BCJMU39_3253	COG0778	Nitroreductase
BCJMU39_3257	COG1028	Short-chain dehydrogenase reductase Sdr
BCJMU39_3259	COG1131	(ABC) transporter
BCJMU39_3264	COG1011	Hydrolase
BCJMU39_3266	COG2365	Tyrosine phosphatase family
BCJMU39_3271	COG0346	lactoylglutathione lyase activity
BCJMU39_3272	COG1940	carbohydrate kinase activity
BCJMU39_3273	COG0110	maltose O-acetyltransferase activity
BCJMU39_3275	COG0577	efflux transmembrane transporter activity
BCJMU39_3275	COG1136	(ABC) transporter
BCJMU39_3279	COG0628	permease
BCJMU39_3283	COG2226	methyltransferase
BCJMU39_3285	COG0477	Major facilitator Superfamily
BCJMU39_3291	COG1253	flavin adenine dinucleotide binding
BCJMU39_3292	COG0789	Transcriptional regulator
BCJMU39_3294	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
BCJMU39_3300	COG0697	spore germination
BCJMU39_3301	COG1357	PFAM Pentapeptide repeats (8 copies)
BCJMU39_3302	COG3813	Protein conserved in bacteria
BCJMU39_3303	COG3328	transposase activity
BCJMU39_3306	COG2706	6-phosphogluconolactonase activity
BCJMU39_3308	COG1070	Carbohydrate kinase
BCJMU39_3310	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
BCJMU39_3311	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
BCJMU39_3313	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
BCJMU39_3315	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BCJMU39_3317	COG1028	Short-chain dehydrogenase reductase Sdr
BCJMU39_3322	COG0656	L-ascorbic acid biosynthetic process
BCJMU39_3326	COG0814	amino acid
BCJMU39_3332	COG1393	Belongs to the ArsC family
BCJMU39_3333	COG1733	regulation of RNA biosynthetic process
BCJMU39_3334	COG2188	Transcriptional regulator
BCJMU39_3335	COG0673	inositol 2-dehydrogenase activity
BCJMU39_3336	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
BCJMU39_3337	COG1733	regulation of RNA biosynthetic process
BCJMU39_3338	COG1733	regulation of RNA biosynthetic process
BCJMU39_3342	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BCJMU39_3351	COG0318	PFAM AMP-dependent synthetase and ligase
BCJMU39_3352	COG2249	NAD(P)H dehydrogenase (quinone) activity
BCJMU39_3353	COG1733	regulation of RNA biosynthetic process
BCJMU39_3359	COG1191	sigma factor activity
BCJMU39_3364	COG1309	transcriptional regulator
BCJMU39_3368	COG3152	Membrane
BCJMU39_3373	COG1151	hydroxylamine reductase activity
BCJMU39_3375	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BCJMU39_3376	COG3409	Peptidoglycan-binding domain 1 protein
BCJMU39_3376	COG3757	hydrolase, family 25
BCJMU39_3383	COG2072	flavoprotein involved in K transport
BCJMU39_3391	COG1113	amino acid transport
BCJMU39_3392	COG2814	Major facilitator Superfamily
BCJMU39_3399	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
BCJMU39_3400	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
BCJMU39_3402	COG3328	transposase activity
BCJMU39_3405	COG3739	integral membrane protein
BCJMU39_3406	COG0384	phenazine biosynthesis protein PhzF
BCJMU39_3412	COG0583	DNA-binding transcription factor activity
BCJMU39_3416	COG1193	negative regulation of DNA recombination
BCJMU39_3420	COG2162	N-hydroxyarylamine O-acetyltransferase activity
BCJMU39_3421	COG1164	Oligoendopeptidase f
BCJMU39_3424	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
BCJMU39_3429	COG0584	glycerophosphoryl diester phosphodiesterase
BCJMU39_3433	COG0640	Transcriptional regulator
BCJMU39_3434	COG0604	alcohol dehydrogenase
BCJMU39_3436	COG0457	Tetratricopeptide repeat
BCJMU39_3438	COG2808	Putative FMN-binding domain
BCJMU39_3440	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
BCJMU39_3440	COG0456	acetyltransferase
BCJMU39_3442	COG0385	Bile acid
BCJMU39_3443	COG0277	FAD linked oxidase domain protein
BCJMU39_3449	COG1216	Glycosyl transferase, family 2
BCJMU39_3450	COG1024	Enoyl-CoA hydratase
BCJMU39_3452	COG1285	pathogenesis
BCJMU39_3456	COG2514	catechol 2,3-dioxygenase activity
BCJMU39_3457	COG2720	vancomycin resistance protein
BCJMU39_3465	COG0716	FMN binding
BCJMU39_3468	COG0494	nUDIX hydrolase
BCJMU39_3472	COG1028	Short-chain dehydrogenase reductase Sdr
BCJMU39_3474	COG0165	Argininosuccinate lyase
BCJMU39_3477	COG4145	pantothenate transmembrane transporter activity
BCJMU39_3479	COG1012	belongs to the aldehyde dehydrogenase family
BCJMU39_3487	COG1012	belongs to the aldehyde dehydrogenase family
BCJMU39_3488	COG1028	Short-chain dehydrogenase reductase Sdr
BCJMU39_3490	COG1657	PFAM Prenyltransferase squalene oxidase
BCJMU39_3491	COG1963	PFAM Acid phosphatase vanadium-dependent haloperoxidase related
BCJMU39_3492	COG2962	Rard protein
BCJMU39_3493	COG3326	Membrane
BCJMU39_3496	COG0489	protein tyrosine kinase activity
BCJMU39_3498	COG0314	molybdopterin synthase activity
BCJMU39_3499	COG0303	'Molybdopterin
BCJMU39_3500	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
BCJMU39_3501	COG2116	formate transmembrane transporter activity
BCJMU39_3503	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
BCJMU39_3504	COG5609	conserved protein (DUF2294)
BCJMU39_3505	COG2427	Protein of unknown function (DUF1641)
BCJMU39_3506	COG3383	formate dehydrogenase (NAD+) activity
BCJMU39_3508	COG0697	spore germination
BCJMU39_3516	COG2226	methyltransferase
BCJMU39_3517	COG4166	transmembrane transport
BCJMU39_3519	COG2801	Transposase and inactivated derivatives
BCJMU39_3520	COG4166	transmembrane transport
BCJMU39_3521	COG4166	transmembrane transport
BCJMU39_3522	COG1301	dicarboxylic acid transport
BCJMU39_3523	COG1316	TRANSCRIPTIONal
BCJMU39_3525	COG1595	DNA-templated transcription, initiation
BCJMU39_3528	COG1131	(ABC) transporter
BCJMU39_3533	COG0673	inositol 2-dehydrogenase activity
BCJMU39_3534	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
BCJMU39_3535	COG0187	DNA topoisomerase II activity
BCJMU39_3536	COG1832	CoA-binding protein
BCJMU39_3537	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
BCJMU39_3538	COG0745	RESPONSE REGULATOR receiver
BCJMU39_3542	COG4841	protein insertion into membrane
BCJMU39_3543	COG0824	Thioesterase
BCJMU39_3549	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
BCJMU39_3550	COG1132	(ABC) transporter
BCJMU39_3551	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
BCJMU39_3557	COG2211	Major facilitator Superfamily
BCJMU39_3559	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
BCJMU39_3562	COG0183	Belongs to the thiolase family
BCJMU39_3563	COG0318	PFAM AMP-dependent synthetase and ligase
BCJMU39_3564	COG1268	BioY protein
BCJMU39_3565	COG0318	PFAM AMP-dependent synthetase and ligase
BCJMU39_3578	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BCJMU39_3580	COG5002	protein histidine kinase activity
BCJMU39_3581	COG5002	protein histidine kinase activity
BCJMU39_3582	COG0400	carboxylic ester hydrolase activity
BCJMU39_3583	COG0346	lactoylglutathione lyase activity
BCJMU39_3584	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
BCJMU39_3585	COG0069	glutamate synthase activity
BCJMU39_3586	COG1902	pentaerythritol trinitrate reductase activity
BCJMU39_3587	COG1329	Transcriptional regulator
BCJMU39_3588	COG0010	Belongs to the arginase family
BCJMU39_3593	COG2226	methyltransferase
BCJMU39_3601	COG3344	reverse transcriptase
BCJMU39_3604	COG4846	Membrane protein involved in cytochrome C biogenesis
BCJMU39_3605	COG0785	Cytochrome C biogenesis protein
BCJMU39_3607	COG1473	amidohydrolase
BCJMU39_3609	COG1131	(ABC) transporter
BCJMU39_3611	COG0583	DNA-binding transcription factor activity
BCJMU39_3613	COG1346	cytolysis
BCJMU39_3616	COG0730	response to heat
BCJMU39_3621	COG1132	(ABC) transporter
BCJMU39_3622	COG1132	(ABC) transporter
BCJMU39_3628	COG3639	organic phosphonate transmembrane transporter activity
BCJMU39_3629	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
BCJMU39_3630	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BCJMU39_3631	COG0737	Belongs to the 5'-nucleotidase family
BCJMU39_3633	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
BCJMU39_3637	COG1695	Transcriptional regulator
BCJMU39_3638	COG0174	glutamine synthetase
BCJMU39_3639	COG0789	Transcriptional regulator
BCJMU39_3640	COG4100	CystaTHIonine beta-lyase family protein involved in aluminum resistance
BCJMU39_3641	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
BCJMU39_3642	COG2860	membrane
BCJMU39_3644	COG0464	growth
BCJMU39_3648	COG2801	Transposase and inactivated derivatives
BCJMU39_3652	COG3584	3D domain protein
BCJMU39_3652	COG1388	LysM domain
BCJMU39_3653	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
BCJMU39_3653	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BCJMU39_3653	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BCJMU39_3654	COG1105	Belongs to the carbohydrate kinase PfkB family
BCJMU39_3655	COG1349	DNA-binding transcription factor activity
BCJMU39_3656	COG1979	alcohol dehydrogenase
BCJMU39_3657	COG2322	membrane
BCJMU39_3659	COG1113	amino acid transport
BCJMU39_3661	COG1408	metallophosphoesterase
BCJMU39_3662	COG2116	formate transmembrane transporter activity
BCJMU39_3664	COG2217	Heavy metal translocating P-type atpase
BCJMU39_3665	COG2608	mercury ion transmembrane transporter activity
BCJMU39_3666	COG1937	Protein conserved in bacteria
BCJMU39_3674	COG2819	hydrolase of the alpha beta superfamily
BCJMU39_3675	COG1120	ATPase activity
BCJMU39_3676	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BCJMU39_3677	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BCJMU39_3678	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
BCJMU39_3679	COG0708	Exodeoxyribonuclease III
BCJMU39_3680	COG2169	Transcriptional regulator
BCJMU39_3681	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
BCJMU39_3682	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
BCJMU39_3684	COG2364	Membrane
BCJMU39_3687	COG2267	carboxylic ester hydrolase activity
BCJMU39_3688	COG0346	lactoylglutathione lyase activity
BCJMU39_3689	COG3300	MHYT domain
BCJMU39_3689	COG5001	Diguanylate cyclase
BCJMU39_3693	COG1380	Effector of murein hydrolase LrgA
BCJMU39_3694	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BCJMU39_3698	COG1404	Belongs to the peptidase S8 family
BCJMU39_3699	COG3773	Cell wall hydrolase
BCJMU39_3701	COG0562	UDP-galactopyranose mutase
BCJMU39_3702	COG1368	sulfuric ester hydrolase activity
BCJMU39_3703	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
BCJMU39_3707	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
BCJMU39_3708	COG2814	Major facilitator Superfamily
BCJMU39_3710	COG0640	Transcriptional regulator
BCJMU39_3714	COG4550	Control of competence regulator ComK, YlbF/YmcA
BCJMU39_3716	COG1013	pyruvate-flavodoxin oxidoreductase activity
BCJMU39_3717	COG0674	pyruvate-flavodoxin oxidoreductase activity
BCJMU39_3717	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
BCJMU39_3719	COG2359	stage V sporulation protein S
BCJMU39_3720	COG1692	metallophosphoesterase
BCJMU39_3727	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
BCJMU39_3728	COG1426	Protein conserved in bacteria
BCJMU39_3731	COG0300	oxidoreductase activity
BCJMU39_3732	COG0612	Peptidase, M16
BCJMU39_3733	COG0612	Peptidase, M16
BCJMU39_3734	COG1079	Belongs to the binding-protein-dependent transport system permease family
BCJMU39_3735	COG4603	Belongs to the binding-protein-dependent transport system permease family
BCJMU39_3736	COG3845	ABC transporter
BCJMU39_3737	COG1744	ABC transporter substrate-binding protein PnrA-like
BCJMU39_3738	COG2188	Transcriptional regulator
BCJMU39_3739	COG1674	ftsk spoiiie
BCJMU39_3741	COG0740	serine-type endopeptidase activity
BCJMU39_3742	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
BCJMU39_3745	COG0527	aspartate kinase activity
BCJMU39_3746	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
BCJMU39_3747	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
BCJMU39_3748	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
BCJMU39_3749	COG1873	PFAM PRC-barrel domain
BCJMU39_3750	COG0612	Peptidase, M16
BCJMU39_3751	COG0726	polysaccharide deacetylase
BCJMU39_3754	COG0196	riboflavin kinase activity
BCJMU39_3757	COG1550	Protein conserved in bacteria
BCJMU39_3759	COG1358	cellular component organization or biogenesis
BCJMU39_3760	COG2740	Nucleic-acid-binding protein implicated in transcription termination
BCJMU39_3761	COG0195	Participates in both transcription termination and antitermination
BCJMU39_3768	COG0750	zinc metalloprotease
BCJMU39_3770	COG4589	Belongs to the CDS family
BCJMU39_3773	COG0528	UMP kinase activity
BCJMU39_3779	COG4974	Belongs to the 'phage' integrase family
BCJMU39_3781	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
BCJMU39_3782	COG0758	DNA mediated transformation
BCJMU39_3783	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
BCJMU39_3791	COG1837	Belongs to the UPF0109 family
BCJMU39_3793	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
BCJMU39_3795	COG0552	protein localization to endoplasmic reticulum
BCJMU39_3796	COG1196	nuclear chromosome segregation
BCJMU39_3798	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
BCJMU39_3799	COG1028	Short-chain dehydrogenase reductase Sdr
BCJMU39_3800	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
BCJMU39_3803	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
BCJMU39_3804	COG1461	Dihydroxyacetone kinase
BCJMU39_3805	COG1302	Protein conserved in bacteria
BCJMU39_3807	COG1564	THIamine pyrophosphokinase
BCJMU39_3808	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
BCJMU39_3809	COG1162	GTPase activity
BCJMU39_3810	COG2815	serine threonine protein kinase
BCJMU39_3810	COG0515	serine threonine protein kinase
BCJMU39_3811	COG0631	protein serine/threonine phosphatase activity
BCJMU39_3813	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
BCJMU39_3813	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
BCJMU39_3815	COG0242	peptide deformylase activity
BCJMU39_3816	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
BCJMU39_3817	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
BCJMU39_3821	COG1561	YicC-like family, N-terminal region
BCJMU39_3822	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
BCJMU39_3824	COG0006	proline dipeptidase activity
BCJMU39_3828	COG3069	C4-dicarboxylate transmembrane transporter activity
BCJMU39_3840	COG0564	pseudouridine synthase activity
BCJMU39_3844	COG3599	regulation of cell shape
BCJMU39_3845	COG2302	S4 RNA-binding domain
BCJMU39_3846	COG0762	integral membrane protein
BCJMU39_3848	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
BCJMU39_3849	COG1496	oxidoreductase activity
BCJMU39_3850	COG1873	PFAM PRC-barrel domain
BCJMU39_3851	COG1191	sigma factor activity
BCJMU39_3852	COG1191	sigma factor activity
BCJMU39_3854	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
BCJMU39_3855	COG0849	cell division
BCJMU39_3856	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
BCJMU39_3859	COG0772	Belongs to the SEDS family
BCJMU39_3862	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
BCJMU39_3863	COG0768	penicillin binding
BCJMU39_3864	COG0768	penicillin binding
BCJMU39_3865	COG4839	cell division protein FtsL
BCJMU39_3868	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
BCJMU39_3871	COG0333	Belongs to the bacterial ribosomal protein bL32 family
BCJMU39_3872	COG1399	metal-binding, possibly nucleic acid-binding protein
BCJMU39_3874	COG3480	Lon protease (S16) C-terminal proteolytic domain
BCJMU39_3875	COG1752	Esterase of the alpha-beta hydrolase superfamily
BCJMU39_3876	COG3314	Sporulation integral membrane protein YlbJ
BCJMU39_3878	COG0742	ribosomal rna small subunit methyltransferase
BCJMU39_3881	COG3679	Belongs to the UPF0342 family
BCJMU39_3882	COG0406	alpha-ribazole phosphatase activity
BCJMU39_3885	COG2340	Cysteine-rich secretory protein family
BCJMU39_3888	COG3336	cytochrome c oxidase
BCJMU39_3895	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
BCJMU39_3896	COG0772	Belongs to the SEDS family
BCJMU39_3898	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
BCJMU39_3899	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
BCJMU39_3901	COG4896	Protein conserved in bacteria
BCJMU39_3904	COG1217	gtp-binding protein TYPA
BCJMU39_3906	COG0483	inositol monophosphate 1-phosphatase activity
BCJMU39_3910	COG1982	Orn Lys Arg decarboxylase major
BCJMU39_3919	COG0022	dehydrogenase e1 component
BCJMU39_3920	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
BCJMU39_3922	COG0242	peptide deformylase activity
BCJMU39_3923	COG0561	phosphatase activity
BCJMU39_3925	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
BCJMU39_3926	COG0569	domain protein
BCJMU39_3930	COG0583	DNA-binding transcription factor activity
BCJMU39_3931	COG0517	IMP dehydrogenase activity
BCJMU39_3933	COG1978	Selenoprotein B, glycine betaine sarcosine D-proline reductase family
BCJMU39_3935	COG4703	Protein of unknown function (DUF1797)
BCJMU39_3938	COG2200	EAL domain
BCJMU39_3939	COG1028	Short-chain dehydrogenase reductase Sdr
BCJMU39_3940	COG1408	metallophosphoesterase
BCJMU39_3942	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
BCJMU39_3949	COG2814	Major facilitator Superfamily
BCJMU39_3953	COG3209	COG3209 Rhs family protein
BCJMU39_3955	COG2205	protein histidine kinase activity
BCJMU39_3957	COG0436	Aminotransferase
BCJMU39_3958	COG1609	Transcriptional regulator
BCJMU39_3959	COG3833	ABC-type maltose transport systems, permease component
BCJMU39_3960	COG1175	transmembrane transport
BCJMU39_3961	COG2182	Extracellular solute-binding protein
BCJMU39_3963	COG0366	Alpha amylase catalytic
BCJMU39_3964	COG3842	ATPase activity
BCJMU39_3972	COG0183	Belongs to the thiolase family
BCJMU39_3979	COG1695	Transcriptional regulator
BCJMU39_3980	COG1028	Short-chain dehydrogenase reductase Sdr
BCJMU39_3984	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
BCJMU39_3985	COG0436	Aminotransferase
BCJMU39_3992	COG2084	Dehydrogenase
BCJMU39_3993	COG2199	diguanylate cyclase activity
BCJMU39_3994	COG0778	Nitroreductase
BCJMU39_3999	COG2190	(PTS) system
BCJMU39_3999	COG1263	PTS System
BCJMU39_3999	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BCJMU39_4000	COG3711	transcriptional antiterminator
BCJMU39_4002	COG2188	Transcriptional regulator
BCJMU39_4004	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
BCJMU39_4008	COG1547	Domain of unknown function (DUF309)
BCJMU39_4009	COG0456	acetyltransferase
BCJMU39_4010	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
BCJMU39_4011	COG4086	secreted protein
BCJMU39_4012	COG0561	phosphatase activity
BCJMU39_4013	COG0697	spore germination
BCJMU39_4016	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
BCJMU39_4020	COG0733	neurotransmitter:sodium symporter activity
BCJMU39_4024	COG1686	Belongs to the peptidase S11 family
BCJMU39_4025	COG1725	Transcriptional regulator
BCJMU39_4026	COG1131	(ABC) transporter
BCJMU39_4030	COG1846	Transcriptional regulator
BCJMU39_4033	COG0598	Magnesium transport protein CorA
BCJMU39_4038	COG4974	Belongs to the 'phage' integrase family
BCJMU39_4040	COG0735	belongs to the Fur family
BCJMU39_4041	COG1300	Membrane
BCJMU39_4045	COG0667	Aldo Keto reductase
BCJMU39_4046	COG0656	L-ascorbic acid biosynthetic process
BCJMU39_4047	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
BCJMU39_4047	COG0456	acetyltransferase
BCJMU39_4049	COG1525	nuclease
BCJMU39_4049	COG0737	Belongs to the 5'-nucleotidase family
BCJMU39_4049	COG4085	toxin activity
BCJMU39_4051	COG0596	Alpha beta hydrolase
BCJMU39_4052	COG2056	Na+-H+ antiporter family
BCJMU39_4053	COG1609	Transcriptional regulator
BCJMU39_4054	COG0454	-acetyltransferase
BCJMU39_4055	COG1073	alpha beta
BCJMU39_4058	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
BCJMU39_4058	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
BCJMU39_4059	COG0307	riboflavin synthase, alpha
BCJMU39_4064	COG4106	trans-aconitate 2-methyltransferase activity
BCJMU39_4065	COG1073	alpha beta
BCJMU39_4065	COG2226	methyltransferase
BCJMU39_4068	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
BCJMU39_4070	COG1757	Na H antiporter
BCJMU39_4071	COG0737	Belongs to the 5'-nucleotidase family
BCJMU39_4073	COG1522	sequence-specific DNA binding
BCJMU39_4077	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
BCJMU39_4082	COG0300	oxidoreductase activity
BCJMU39_4083	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BCJMU39_4084	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
BCJMU39_4085	COG1760	l-serine dehydratase
BCJMU39_4086	COG1760	l-serine dehydratase
BCJMU39_4090	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
BCJMU39_4092	COG2195	Cleaves the N-terminal amino acid of tripeptides
BCJMU39_4093	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BCJMU39_4095	COG1376	ErfK ybiS ycfS ynhG family protein
BCJMU39_4096	COG4129	membrane
BCJMU39_4097	COG1126	abc transporter atp-binding protein
BCJMU39_4098	COG0765	amino acid transport
BCJMU39_4099	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BCJMU39_4101	COG2816	NAD+ diphosphatase activity
BCJMU39_4102	COG0772	Belongs to the SEDS family
BCJMU39_4103	COG0508	dehydrogenase complex catalyzes the overall conversion of
BCJMU39_4104	COG0022	dehydrogenase e1 component
BCJMU39_4105	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
BCJMU39_4106	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
BCJMU39_4109	COG0280	phosphate acetyltransferase
BCJMU39_4110	COG3829	transcription factor binding
BCJMU39_4110	COG3290	protein histidine kinase activity
BCJMU39_4112	COG0584	glycerophosphoryl diester phosphodiesterase
BCJMU39_4113	COG3093	addiction module antidote protein HigA
BCJMU39_4115	COG0745	RESPONSE REGULATOR receiver
BCJMU39_4116	COG0750	zinc metalloprotease
BCJMU39_4117	COG0497	DNA recombination
BCJMU39_4119	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
BCJMU39_4121	COG0142	geranyltranstransferase activity
BCJMU39_4126	COG1302	Protein conserved in bacteria
BCJMU39_4127	COG0439	Biotin carboxylase
BCJMU39_4128	COG0511	ligase activity, forming carbon-carbon bonds
BCJMU39_4136	COG3854	ATPases associated with a variety of cellular activities
BCJMU39_4141	COG0006	proline dipeptidase activity
BCJMU39_4144	COG3872	metal-dependent enzyme
BCJMU39_4146	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
BCJMU39_4153	COG0095	Lipoate-protein ligase
BCJMU39_4154	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
BCJMU39_4155	COG1609	Transcriptional regulator
BCJMU39_4157	COG2076	Multidrug Resistance protein
BCJMU39_4158	COG2076	Multidrug Resistance protein
BCJMU39_4167	COG1131	(ABC) transporter
BCJMU39_4168	COG1725	Transcriptional regulator
BCJMU39_4174	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
BCJMU39_4185	COG4970	Tfp pilus assembly protein FimT
BCJMU39_4187	COG1459	type II secretion system
BCJMU39_4188	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
BCJMU39_4198	COG0646	methionine synthase
BCJMU39_4198	COG1410	methionine synthase
BCJMU39_4199	COG0646	methionine synthase
BCJMU39_4199	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
BCJMU39_4200	COG0626	cystathionine gamma-synthase activity
BCJMU39_4201	COG0626	cystathionine gamma-synthase activity
BCJMU39_4205	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BCJMU39_4207	COG1940	carbohydrate kinase activity
BCJMU39_4208	COG4483	Protein conserved in bacteria
BCJMU39_4209	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
BCJMU39_4210	COG0267	Belongs to the bacterial ribosomal protein bL33 family
BCJMU39_4211	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
BCJMU39_4212	COG0704	Plays a role in the regulation of phosphate uptake
BCJMU39_4214	COG0581	inorganic phosphate transmembrane transporter activity
BCJMU39_4215	COG0573	inorganic phosphate transmembrane transporter activity
BCJMU39_4216	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
BCJMU39_4218	COG0768	penicillin binding
BCJMU39_4219	COG0477	Major facilitator Superfamily
BCJMU39_4220	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
BCJMU39_4224	COG0735	belongs to the Fur family
BCJMU39_4225	COG1108	ABC-type Mn2 Zn2 transport systems permease components
BCJMU39_4226	COG1121	(ABC) transporter
BCJMU39_4227	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BCJMU39_4233	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
BCJMU39_4234	COG2384	SAM-dependent methyltransferase
BCJMU39_4235	COG2010	Cytochrome c
BCJMU39_4236	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
BCJMU39_4237	COG0358	DNA primase activity
BCJMU39_4239	COG0517	IMP dehydrogenase activity
BCJMU39_4242	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
BCJMU39_4243	COG0295	cytidine deaminase activity
BCJMU39_4244	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
BCJMU39_4246	COG1480	7TM receptor with intracellular HD hydrolase
BCJMU39_4247	COG1702	phosphate starvation-inducible protein PhoH
BCJMU39_4250	COG1610	YqeY-like protein
BCJMU39_4251	COG0828	Belongs to the bacterial ribosomal protein bS21 family
BCJMU39_4252	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
BCJMU39_4253	COG1385	rRNA (uridine-N3-)-methyltransferase activity
BCJMU39_4259	COG0635	Involved in the biosynthesis of porphyrin-containing compound
BCJMU39_4260	COG1733	regulation of RNA biosynthetic process
BCJMU39_4265	COG1466	dna polymerase III delta subunit
BCJMU39_4267	COG0658	competence protein
BCJMU39_4267	COG2333	competence protein COMEC
BCJMU39_4268	COG2131	deaminase
BCJMU39_4269	COG1555	photosystem II stabilization
BCJMU39_4269	COG1596	polysaccharide export
BCJMU39_4270	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
BCJMU39_4271	COG2226	methyltransferase
BCJMU39_4272	COG0799	negative regulation of ribosome biogenesis
BCJMU39_4273	COG1713	HD superfamily hydrolase involved in NAD metabolism
BCJMU39_4275	COG1534	Rna-binding protein
BCJMU39_4277	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
BCJMU39_4278	COG2179	HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
BCJMU39_4284	COG1595	DNA-templated transcription, initiation
BCJMU39_4286	COG0778	Nitroreductase
BCJMU39_4287	COG2357	RelA SpoT domain protein
BCJMU39_4289	COG1785	Belongs to the alkaline phosphatase family
BCJMU39_4291	COG2267	carboxylic ester hydrolase activity
BCJMU39_4298	COG1404	Belongs to the peptidase S8 family
BCJMU39_4299	COG3186	Phenylalanine-4-hydroxylase
BCJMU39_4301	COG2514	catechol 2,3-dioxygenase activity
BCJMU39_4302	COG2259	Doxx family
BCJMU39_4310	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
BCJMU39_4312	COG1012	belongs to the aldehyde dehydrogenase family
BCJMU39_4312	COG1454	alcohol dehydrogenase
BCJMU39_4313	COG0626	cystathionine gamma-synthase activity
BCJMU39_4314	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
BCJMU39_4319	COG0768	penicillin binding
BCJMU39_4322	COG0826	peptidase U32
BCJMU39_4323	COG0826	peptidase U32
BCJMU39_4324	COG4122	O-methyltransferase activity
BCJMU39_4325	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
BCJMU39_4331	COG0628	permease
BCJMU39_4335	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
BCJMU39_4338	COG1104	cysteine desulfurase activity
BCJMU39_4339	COG1959	2 iron, 2 sulfur cluster binding
BCJMU39_4340	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
BCJMU39_4343	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
BCJMU39_4351	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
BCJMU39_4353	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
BCJMU39_4353	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
BCJMU39_4354	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
BCJMU39_4355	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
BCJMU39_4355	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
BCJMU39_4357	COG2244	polysaccharide biosynthetic process
BCJMU39_4358	COG2323	membrane
BCJMU39_4360	COG1862	Preprotein translocase
BCJMU39_4366	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
BCJMU39_4368	COG0697	spore germination
BCJMU39_4369	COG0640	Transcriptional regulator
BCJMU39_4374	COG0157	Belongs to the NadC ModD family
BCJMU39_4375	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
BCJMU39_4376	COG1104	cysteine desulfurase activity
BCJMU39_4377	COG1827	regulation of RNA biosynthetic process
BCJMU39_4378	COG2258	MOSC domain
BCJMU39_4379	COG0077	Prephenate dehydratase
BCJMU39_4380	COG0577	efflux transmembrane transporter activity
BCJMU39_4381	COG0577	efflux transmembrane transporter activity
BCJMU39_4382	COG1136	(ABC) transporter
BCJMU39_4383	COG5002	protein histidine kinase activity
BCJMU39_4384	COG0745	RESPONSE REGULATOR receiver
BCJMU39_4386	COG3290	protein histidine kinase activity
BCJMU39_4388	COG2868	ribosomal protein
BCJMU39_4389	COG0261	This protein binds to 23S rRNA in the presence of protein L20
BCJMU39_4390	COG1530	ribonuclease E activity
BCJMU39_4391	COG1994	Peptidase M50
BCJMU39_4392	COG0739	heme binding
BCJMU39_4393	COG2894	cell division
BCJMU39_4397	COG1077	Cell shape determining protein MreB Mrl
BCJMU39_4398	COG2003	Belongs to the UPF0758 family
BCJMU39_4405	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
BCJMU39_4405	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
BCJMU39_4433	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
BCJMU39_4441	COG0285	dihydrofolate synthase activity
BCJMU39_4444	COG1388	LysM domain
BCJMU39_4446	COG0113	porphobilinogen synthase activity
BCJMU39_4447	COG1587	Uroporphyrinogen-III synthase
BCJMU39_4449	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
BCJMU39_4451	COG1846	Transcriptional regulator
BCJMU39_4452	COG1764	response to oxidative stress
BCJMU39_4455	COG0470	DNA polymerase III
BCJMU39_4455	COG1067	ATP-dependent peptidase activity
BCJMU39_4464	COG0622	Phosphoesterase
BCJMU39_4467	COG5401	PFAM Sporulation and spore germination
BCJMU39_4470	COG2197	response regulator
BCJMU39_4471	COG2233	PERMEase
BCJMU39_4472	COG0402	S-adenosylhomocysteine deaminase activity
BCJMU39_4473	COG1983	PspC domain protein
BCJMU39_4474	COG1396	sequence-specific DNA binding
BCJMU39_4475	COG0697	spore germination
BCJMU39_4477	COG1959	2 iron, 2 sulfur cluster binding
BCJMU39_4478	COG1668	transmembrane transport
BCJMU39_4479	COG4152	abc transporter atp-binding protein
BCJMU39_4480	COG2503	HAD superfamily, subfamily IIIB (Acid phosphatase)
BCJMU39_4481	COG1360	Flagellar Motor Protein
BCJMU39_4482	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
BCJMU39_4483	COG1876	peptidase activity
BCJMU39_4484	COG0824	Thioesterase
BCJMU39_4485	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
BCJMU39_4486	COG1053	succinate dehydrogenase
BCJMU39_4487	COG2009	succinate dehydrogenase
BCJMU39_4488	COG1719	4-vinyl reductase, 4VR
BCJMU39_4490	COG3118	belongs to the thioredoxin family
BCJMU39_4491	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
BCJMU39_4492	COG2086	electron transfer activity
BCJMU39_4493	COG1024	Enoyl-CoA hydratase
BCJMU39_4494	COG1309	transcriptional regulator
BCJMU39_4495	COG0318	PFAM AMP-dependent synthetase and ligase
BCJMU39_4497	COG2318	DinB family
BCJMU39_4502	COG1131	(ABC) transporter
BCJMU39_4503	COG2205	protein histidine kinase activity
BCJMU39_4504	COG0745	RESPONSE REGULATOR receiver
BCJMU39_4506	COG4895	conserved protein (DUF2196)
BCJMU39_4507	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
BCJMU39_4510	COG4509	Sortase family
BCJMU39_4511	COG1120	ATPase activity
BCJMU39_4514	COG5386	Cell surface protein
BCJMU39_4515	COG5386	Cell surface protein
BCJMU39_4517	COG1114	Component of the transport system for branched-chain amino acids
BCJMU39_4518	COG1187	pseudouridine synthase activity
BCJMU39_4520	COG1796	DNA polymerase
BCJMU39_4520	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
BCJMU39_4521	COG1286	toxin biosynthetic process
BCJMU39_4529	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
BCJMU39_4531	COG1418	mRNA catabolic process
BCJMU39_4533	COG2814	Major facilitator Superfamily
BCJMU39_4534	COG1566	PFAM secretion protein HlyD family protein
BCJMU39_4535	COG1309	transcriptional regulator
BCJMU39_4536	COG1363	Peptidase, m42
BCJMU39_4541	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
BCJMU39_4543	COG1484	DNA-dependent DNA replication
BCJMU39_4544	COG3611	Membrane attachment protein
BCJMU39_4546	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
BCJMU39_4547	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
BCJMU39_4548	COG0237	dephospho-CoA kinase activity
BCJMU39_4549	COG1971	Probably functions as a manganese efflux pump
BCJMU39_4551	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
BCJMU39_4551	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
BCJMU39_4552	COG5002	protein histidine kinase activity
BCJMU39_4553	COG0745	RESPONSE REGULATOR receiver
BCJMU39_4558	COG0538	isocitrate dehydrogenase activity
BCJMU39_4559	COG0372	Belongs to the citrate synthase family
BCJMU39_4561	COG0628	permease
BCJMU39_4562	COG3030	protein affecting phage T7 exclusion by the F plasmid
BCJMU39_4567	COG1725	Transcriptional regulator
BCJMU39_4568	COG0281	malic enzyme
BCJMU39_4569	COG0587	DNA-directed DNA polymerase activity
BCJMU39_4572	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
BCJMU39_4575	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
BCJMU39_4577	COG4109	DRTGG domain
BCJMU39_4580	COG0006	proline dipeptidase activity
BCJMU39_4586	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BCJMU39_4587	COG0662	Cupin 2, conserved barrel domain protein
BCJMU39_4590	COG1028	Short-chain dehydrogenase reductase Sdr
BCJMU39_4591	COG0589	response to stress
BCJMU39_4599	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BCJMU39_4602	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
BCJMU39_4603	COG0827	DNA restriction-modification system
BCJMU39_4604	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
BCJMU39_4606	COG3874	Sporulation protein YtfJ
BCJMU39_4609	COG1574	metal-dependent hydrolase with the TIM-barrel fold
BCJMU39_4611	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
BCJMU39_4615	COG1104	cysteine desulfurase activity
BCJMU39_4617	COG0583	DNA-binding transcription factor activity
BCJMU39_4618	COG0697	spore germination
BCJMU39_4619	COG1309	transcriptional regulator
BCJMU39_4620	COG1956	GAF domain-containing protein
BCJMU39_4621	COG0626	cystathionine gamma-synthase activity
BCJMU39_4630	COG1595	DNA-templated transcription, initiation
BCJMU39_4633	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
BCJMU39_4634	COG0454	-acetyltransferase
BCJMU39_4635	COG0517	IMP dehydrogenase activity
BCJMU39_4636	COG0123	including yeast histone deacetylase and acetoin utilization protein
BCJMU39_4637	COG2267	carboxylic ester hydrolase activity
BCJMU39_4639	COG0745	RESPONSE REGULATOR receiver
BCJMU39_4641	COG0666	response to abiotic stimulus
BCJMU39_4642	COG0745	RESPONSE REGULATOR receiver
BCJMU39_4642	COG2972	Histidine kinase
BCJMU39_4653	COG1609	Transcriptional regulator
BCJMU39_4654	COG4851	CamS sex pheromone cAM373 precursor
BCJMU39_4655	COG3118	belongs to the thioredoxin family
BCJMU39_4657	COG2309	aminopeptidase activity
BCJMU39_4659	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BCJMU39_4660	COG0697	spore germination
BCJMU39_4661	COG0789	Transcriptional regulator
BCJMU39_4662	COG1695	Transcriptional regulator
BCJMU39_4666	COG1674	ftsk spoiiie
BCJMU39_4666	COG1674	ftsk spoiiie
BCJMU39_4668	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
BCJMU39_4670	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
BCJMU39_4671	COG1986	Phosphatase that hydrolyzes non-canonical purine nucleotides such as XTP and ITP to their respective diphosphate derivatives. Probably excludes non-canonical purines from DNA precursor pool, thus preventing their incorporation into DNA and avoiding chromosomal lesions
BCJMU39_4672	COG1363	Peptidase, m42
BCJMU39_4674	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BCJMU39_4677	COG0510	thiamine kinase activity
BCJMU39_4678	COG1523	belongs to the glycosyl hydrolase 13 family
BCJMU39_4680	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
BCJMU39_4681	COG1349	DNA-binding transcription factor activity
BCJMU39_4682	COG1187	pseudouridine synthase activity
BCJMU39_4683	COG2244	polysaccharide biosynthetic process
BCJMU39_4684	COG2081	HI0933 family
BCJMU39_4685	COG3328	transposase activity
BCJMU39_4688	COG2814	Major facilitator Superfamily
BCJMU39_4690	COG3832	glyoxalase III activity
BCJMU39_4694	COG1329	Transcriptional regulator
BCJMU39_4699	COG0314	molybdopterin synthase activity
BCJMU39_4702	COG1763	Mo-molybdopterin cofactor biosynthetic process
BCJMU39_4703	COG0303	'Molybdopterin
BCJMU39_4705	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
BCJMU39_4706	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
BCJMU39_4714	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
BCJMU39_4716	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
BCJMU39_4725	COG2814	Major facilitator Superfamily
BCJMU39_4728	COG3328	transposase activity
BCJMU39_4729	COG0475	glutathione-regulated potassium exporter activity
BCJMU39_4730	COG0490	domain, Protein
BCJMU39_4731	COG0582	viral genome integration into host DNA
BCJMU39_4733	COG1136	(ABC) transporter
BCJMU39_4737	COG1242	4 iron, 4 sulfur cluster binding
BCJMU39_4738	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
BCJMU39_4739	COG3328	transposase activity
BCJMU39_4742	COG1794	racemase activity, acting on amino acids and derivatives
BCJMU39_4746	COG2267	carboxylic ester hydrolase activity
BCJMU39_4747	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
BCJMU39_4748	COG0671	phosphoesterase, PA-phosphatase related
BCJMU39_4749	COG0438	transferase activity, transferring glycosyl groups
BCJMU39_4751	COG0521	Mo-molybdopterin cofactor biosynthetic process
BCJMU39_4764	COG5002	protein histidine kinase activity
BCJMU39_4765	COG4191	Histidine kinase
BCJMU39_4767	COG2267	carboxylic ester hydrolase activity
BCJMU39_4768	COG1368	sulfuric ester hydrolase activity
BCJMU39_4771	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
BCJMU39_4772	COG1116	anion transmembrane transporter activity
BCJMU39_4773	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
BCJMU39_4778	COG0494	nUDIX hydrolase
BCJMU39_4784	COG0288	reversible hydration of carbon dioxide
BCJMU39_4785	COG1271	oxidase subunit
BCJMU39_4786	COG1294	oxidase, subunit
BCJMU39_4790	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BCJMU39_4795	COG1842	Phage shock protein A
BCJMU39_4801	COG5002	protein histidine kinase activity
BCJMU39_4803	COG0745	RESPONSE REGULATOR receiver
BCJMU39_4809	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
BCJMU39_4811	COG1597	lipid kinase activity
BCJMU39_4815	COG0586	Pfam SNARE associated Golgi protein
BCJMU39_4817	COG4977	sequence-specific DNA binding
BCJMU39_4819	COG0577	efflux transmembrane transporter activity
BCJMU39_4820	COG1136	(ABC) transporter
BCJMU39_4821	COG3708	Transcriptional regulator
BCJMU39_4821	COG2207	Transcriptional regulator
BCJMU39_4824	COG0745	RESPONSE REGULATOR receiver
BCJMU39_4825	COG2205	protein histidine kinase activity
BCJMU39_4826	COG0577	efflux transmembrane transporter activity
BCJMU39_4827	COG0577	efflux transmembrane transporter activity
BCJMU39_4828	COG1136	(ABC) transporter
BCJMU39_4829	COG0577	efflux transmembrane transporter activity
BCJMU39_4834	COG2188	Transcriptional regulator
BCJMU39_4838	COG3964	amidohydrolase
BCJMU39_4840	COG2801	Transposase and inactivated derivatives
BCJMU39_4844	COG4948	Mandelate Racemase Muconate Lactonizing
BCJMU39_4846	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
BCJMU39_4847	COG0596	Alpha beta hydrolase
BCJMU39_4849	COG1169	isochorismate synthase
BCJMU39_4850	COG1575	Belongs to the MenA family. Type 1 subfamily
BCJMU39_4851	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
BCJMU39_4877	COG0058	SHG alpha-glucan phosphorylase activity
BCJMU39_4879	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
BCJMU39_4883	COG1404	Belongs to the peptidase S8 family
BCJMU39_4886	COG1595	DNA-templated transcription, initiation
BCJMU39_4887	COG1285	pathogenesis
BCJMU39_4888	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
BCJMU39_4891	COG2155	Conserved Protein
BCJMU39_4892	COG1098	S1 RNA binding domain
BCJMU39_4893	COG0436	Aminotransferase
BCJMU39_4894	COG1522	sequence-specific DNA binding
BCJMU39_4895	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
BCJMU39_4896	COG2267	carboxylic ester hydrolase activity
BCJMU39_4898	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
BCJMU39_4902	COG5018	Exonuclease
BCJMU39_4903	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
BCJMU39_4908	COG2050	protein possibly involved in aromatic compounds catabolism
BCJMU39_4910	COG1268	BioY protein
BCJMU39_4911	COG1210	Utp--glucose-1-phosphate uridylyltransferase
BCJMU39_4912	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
BCJMU39_4915	COG3584	3D domain protein
BCJMU39_4918	COG1252	NADH dehydrogenase
BCJMU39_4920	COG3708	Transcriptional regulator
BCJMU39_4923	COG1683	Conserved Protein
BCJMU39_4925	COG0316	Belongs to the HesB IscA family
BCJMU39_4928	COG1252	NADH dehydrogenase
BCJMU39_4929	COG2274	protein secretion by the type I secretion system
BCJMU39_4930	COG0390	transport system, permease component
BCJMU39_4932	COG3328	transposase activity
BCJMU39_4933	COG2824	Alkylphosphonate utilization operon protein PhnA
BCJMU39_4937	COG4837	Protein of unknown function (DUF1462)
BCJMU39_4938	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
BCJMU39_4940	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
BCJMU39_4941	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
BCJMU39_4943	COG2249	NAD(P)H dehydrogenase (quinone) activity
BCJMU39_4944	COG0647	UMP catabolic process
BCJMU39_4946	COG2445	Protein of unknown function DUF86
BCJMU39_4947	COG1494	fructose-1,6-bisphosphatase
BCJMU39_4950	COG4470	Protein conserved in bacteria
BCJMU39_4952	COG0789	Transcriptional regulator
BCJMU39_4953	COG4377	Putative membrane peptidase family (DUF2324)
BCJMU39_4958	COG0739	heme binding
BCJMU39_4960	COG3377	Domain of unknown function (DUF1805)
BCJMU39_4961	COG0737	Belongs to the 5'-nucleotidase family
BCJMU39_4962	COG0719	Fe-S assembly protein
BCJMU39_4963	COG0822	iron-sulfur transferase activity
BCJMU39_4964	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
BCJMU39_4965	COG0719	Fe-S assembly protein
BCJMU39_4966	COG0396	ATPase activity
BCJMU39_4967	COG1464	Belongs to the NlpA lipoprotein family
BCJMU39_4968	COG1464	Belongs to the NlpA lipoprotein family
BCJMU39_4969	COG2011	ABC-type metal ion transport system permease component
BCJMU39_4972	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
BCJMU39_4973	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
BCJMU39_4975	COG1393	Belongs to the ArsC family
BCJMU39_4989	COG1396	sequence-specific DNA binding
BCJMU39_4991	COG1309	transcriptional regulator
BCJMU39_4992	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BCJMU39_4993	COG1960	acyl-CoA dehydrogenase activity
BCJMU39_4994	COG0183	Belongs to the thiolase family
BCJMU39_4995	COG1024	Enoyl-CoA hydratase
BCJMU39_4995	COG1250	3-hydroxyacyl-CoA dehydrogenase
BCJMU39_4997	COG1686	Belongs to the peptidase S11 family
BCJMU39_5000	COG0011	TIGRFAM Protein of
BCJMU39_5001	COG0840	transmembrane signaling receptor activity
BCJMU39_5004	COG2814	Major facilitator Superfamily
BCJMU39_5005	COG0531	amino acid
BCJMU39_5010	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BCJMU39_5014	COG3328	transposase activity
BCJMU39_5020	COG0586	Pfam SNARE associated Golgi protein
BCJMU39_5022	COG1376	ErfK ybiS ycfS ynhG family protein
BCJMU39_5023	COG0745	RESPONSE REGULATOR receiver
BCJMU39_5024	COG5002	protein histidine kinase activity
BCJMU39_5029	COG0840	transmembrane signaling receptor activity
BCJMU39_5030	COG2151	metal-sulfur cluster biosynthetic enzyme
BCJMU39_5031	COG3227	Zinc metalloprotease (Elastase)
BCJMU39_5032	COG1741	Belongs to the pirin family
BCJMU39_5035	COG0475	glutathione-regulated potassium exporter activity
BCJMU39_5036	COG0490	domain, Protein
BCJMU39_5038	COG1115	amino acid carrier protein
BCJMU39_5039	COG0783	Belongs to the Dps family
BCJMU39_5042	COG1611	Belongs to the LOG family
BCJMU39_5045	COG2311	Membrane
BCJMU39_5046	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
BCJMU39_5047	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
BCJMU39_5048	COG1115	amino acid carrier protein
BCJMU39_5049	COG1115	amino acid carrier protein
BCJMU39_5050	COG2910	NAD(P)H-binding
BCJMU39_5056	COG0656	L-ascorbic acid biosynthetic process
BCJMU39_5057	COG2814	Major facilitator Superfamily
BCJMU39_5058	COG1733	regulation of RNA biosynthetic process
BCJMU39_5060	COG1252	NADH dehydrogenase
BCJMU39_5061	COG3328	transposase activity
BCJMU39_5064	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
BCJMU39_5067	COG0840	transmembrane signaling receptor activity
BCJMU39_5067	COG3290	protein histidine kinase activity
BCJMU39_5074	COG0488	(ABC) transporter
BCJMU39_5075	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BCJMU39_5077	COG2814	Major facilitator Superfamily
BCJMU39_5087	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
BCJMU39_5088	COG0697	spore germination
BCJMU39_5091	COG0557	exoribonuclease II activity
BCJMU39_5092	COG1647	Serine aminopeptidase, S33
BCJMU39_5093	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
BCJMU39_5094	COG1346	cytolysis
BCJMU39_5101	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
BCJMU39_5104	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
BCJMU39_5108	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
BCJMU39_5111	COG2323	membrane
BCJMU39_5113	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
BCJMU39_5115	COG0391	Required for morphogenesis under gluconeogenic growth conditions
BCJMU39_5117	COG1051	belongs to the nudix hydrolase family
BCJMU39_5119	COG0492	ferredoxin-NADP+ reductase activity
BCJMU39_5120	COG0457	Tetratricopeptide repeat
BCJMU39_5121	COG0110	maltose O-acetyltransferase activity
BCJMU39_5125	COG1950	PFAM Membrane protein of
BCJMU39_5127	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
BCJMU39_5128	COG0556	nucleotide-excision repair
BCJMU39_5131	COG0789	Transcriptional regulator
BCJMU39_5136	COG2855	membrane
BCJMU39_5137	COG0583	DNA-binding transcription factor activity
BCJMU39_5139	COG0655	NAD(P)H dehydrogenase (quinone) activity
BCJMU39_5140	COG0488	(ABC) transporter
BCJMU39_5142	COG1132	(ABC) transporter
BCJMU39_5145	COG3328	transposase activity
BCJMU39_5146	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
BCJMU39_5147	COG0793	Belongs to the peptidase S41A family
BCJMU39_5147	COG3409	Peptidoglycan-binding domain 1 protein
BCJMU39_5148	COG2177	Part of the ABC transporter FtsEX involved in
BCJMU39_5149	COG2884	Cell division ATP-binding protein ftsE
BCJMU39_5151	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
BCJMU39_5153	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
BCJMU39_5154	COG1278	Cold shock
BCJMU39_5155	COG1040	competence protein
BCJMU39_5156	COG4098	Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
BCJMU39_5157	COG0791	NLP P60 protein
BCJMU39_5157	COG1388	LysM domain
BCJMU39_5158	COG1733	regulation of RNA biosynthetic process
BCJMU39_5159	COG1307	EDD domain protein, DegV family
BCJMU39_5160	COG1739	Uncharacterized protein family UPF0029
BCJMU39_5161	COG1316	TRANSCRIPTIONal
BCJMU39_5162	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
BCJMU39_5163	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
BCJMU39_5164	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
BCJMU39_5166	COG3933	PFAM sigma-54 factor interaction domain-containing protein
BCJMU39_5166	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
BCJMU39_5170	COG1486	melibiose metabolic process
BCJMU39_5171	COG1447	Phosphotransferase system cellobiose-specific component IIA
BCJMU39_5172	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
BCJMU39_5174	COG4262	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
BCJMU39_5178	COG1447	Phosphotransferase system cellobiose-specific component IIA
BCJMU39_5180	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
BCJMU39_5181	COG1301	dicarboxylic acid transport
BCJMU39_5183	COG0346	lactoylglutathione lyase activity
BCJMU39_5187	COG1511	domain protein
BCJMU39_5188	COG0583	DNA-binding transcription factor activity
BCJMU39_5189	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
BCJMU39_5191	COG1271	oxidase subunit
BCJMU39_5192	COG1294	oxidase, subunit
BCJMU39_5193	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
BCJMU39_5195	COG1620	l-lactate permease
BCJMU39_5199	COG1620	l-lactate permease
BCJMU39_5201	COG2389	metal-binding protein
BCJMU39_5204	COG1368	sulfuric ester hydrolase activity
BCJMU39_5206	COG1388	LysM domain
BCJMU39_5206	COG0791	NLP P60 protein
BCJMU39_5207	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
BCJMU39_5209	COG1215	transferase activity, transferring glycosyl groups
BCJMU39_5211	COG2801	Transposase and inactivated derivatives
BCJMU39_5212	COG2801	Transposase and inactivated derivatives
BCJMU39_5214	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
BCJMU39_5215	COG3584	3D domain protein
BCJMU39_5215	COG1388	LysM domain
BCJMU39_5217	COG4715	Zinc finger, swim domain protein
BCJMU39_5218	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
BCJMU39_5227	COG0577	efflux transmembrane transporter activity
BCJMU39_5228	COG1136	(ABC) transporter
BCJMU39_5235	COG5002	protein histidine kinase activity
BCJMU39_5236	COG0745	RESPONSE REGULATOR receiver
BCJMU39_5237	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
BCJMU39_5241	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
BCJMU39_5243	COG0438	transferase activity, transferring glycosyl groups
BCJMU39_5244	COG1045	serine acetyltransferase
BCJMU39_5247	COG0438	transferase activity, transferring glycosyl groups
BCJMU39_5248	COG0438	transferase activity, transferring glycosyl groups
BCJMU39_5249	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
BCJMU39_5250	COG0151	Belongs to the GarS family
BCJMU39_5252	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
BCJMU39_5253	COG1086	Polysaccharide biosynthesis protein
BCJMU39_5255	COG1210	Utp--glucose-1-phosphate uridylyltransferase
BCJMU39_5256	COG4464	protein tyrosine phosphatase activity
BCJMU39_5257	COG0489	protein tyrosine kinase activity
BCJMU39_5258	COG3944	biosynthesis protein
BCJMU39_5259	COG0489	protein tyrosine kinase activity
BCJMU39_5262	COG1609	Transcriptional regulator
BCJMU39_5264	COG0739	heme binding
BCJMU39_5267	COG3279	Response regulator of the LytR AlgR family
BCJMU39_5268	COG2385	sporulation resulting in formation of a cellular spore
BCJMU39_5271	COG4836	Membrane
BCJMU39_5272	COG1007	ATP synthesis coupled electron transport
BCJMU39_5274	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
BCJMU39_5276	COG0839	Belongs to the complex I subunit 6 family
BCJMU39_5280	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
BCJMU39_5283	COG3300	MHYT domain
BCJMU39_5283	COG5001	Diguanylate cyclase
BCJMU39_5293	COG0356	it plays a direct role in the translocation of protons across the membrane
BCJMU39_5299	COG0698	ribose 5-phosphate isomerase
BCJMU39_5301	COG2190	(PTS) system
BCJMU39_5302	COG2259	Doxx family
BCJMU39_5303	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
BCJMU39_5308	COG0009	L-threonylcarbamoyladenylate synthase
BCJMU39_5311	COG2890	protein-(glutamine-N5) methyltransferase activity
BCJMU39_5315	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
BCJMU39_5316	COG1494	fructose-1,6-bisphosphatase
BCJMU39_5320	COG4821	SIS domain
BCJMU39_5324	COG1960	acyl-CoA dehydrogenase activity
BCJMU39_5325	COG1960	acyl-CoA dehydrogenase activity
BCJMU39_5326	COG1250	3-hydroxyacyl-CoA dehydrogenase
BCJMU39_5327	COG0183	Belongs to the thiolase family
BCJMU39_5328	COG0247	lactate metabolic process
BCJMU39_5328	COG2181	nitrate reductase activity
BCJMU39_5329	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BCJMU39_5331	COG5001	Diguanylate cyclase
BCJMU39_5331	COG3300	MHYT domain
BCJMU39_5335	COG2197	response regulator
BCJMU39_5336	COG4585	Histidine kinase
BCJMU39_5337	COG0842	Transport permease protein
BCJMU39_5338	COG1131	(ABC) transporter
BCJMU39_5339	COG0024	Methionine aminopeptidase
BCJMU39_5340	COG2234	aminopeptidase activity
BCJMU39_5344	COG1595	DNA-templated transcription, initiation
BCJMU39_5346	COG4506	Protein conserved in bacteria
BCJMU39_5347	COG1619	proteins homologs of microcin C7 resistance protein MccF
BCJMU39_5350	COG0010	Belongs to the arginase family
BCJMU39_5352	COG2814	Major facilitator Superfamily
BCJMU39_5353	COG0789	Transcriptional regulator
BCJMU39_5354	COG0584	glycerophosphoryl diester phosphodiesterase
BCJMU39_5355	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
BCJMU39_5357	COG1994	Peptidase M50
BCJMU39_5359	COG1078	dGTPase activity
BCJMU39_5360	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
BCJMU39_5361	COG1120	ATPase activity
BCJMU39_5362	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BCJMU39_5363	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BCJMU39_5367	COG0095	Lipoate-protein ligase
BCJMU39_5368	COG0280	phosphate acetyltransferase
BCJMU39_5371	COG3773	Cell wall hydrolase
BCJMU39_5373	COG2363	Small membrane protein
BCJMU39_5375	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
BCJMU39_5376	COG2233	PERMEase
BCJMU39_5377	COG0561	phosphatase activity
BCJMU39_5378	COG2814	Major facilitator Superfamily
BCJMU39_5380	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
BCJMU39_5381	COG1131	(ABC) transporter
BCJMU39_5382	COG2755	lipolytic protein G-D-S-L family
BCJMU39_5383	COG1609	Transcriptional regulator
BCJMU39_5385	COG0460	homoserine dehydrogenase
BCJMU39_5387	COG2873	o-acetylhomoserine
BCJMU39_5388	COG1011	Hydrolase
BCJMU39_5389	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
BCJMU39_5391	COG2197	response regulator
BCJMU39_5392	COG4585	Histidine kinase
BCJMU39_5392	COG2203	Gaf domain
BCJMU39_5393	COG0351	phosphomethylpyrimidine kinase
BCJMU39_5394	COG3706	GGDEF domain
BCJMU39_5395	COG2879	small protein
BCJMU39_5396	COG1966	Carbon starvation protein
BCJMU39_5397	COG3279	Response regulator of the LytR AlgR family
BCJMU39_5398	COG0477	Major facilitator Superfamily
BCJMU39_5403	COG0840	transmembrane signaling receptor activity
BCJMU39_5405	COG1607	acyl-coa hydrolase
BCJMU39_5406	COG1216	Glycosyl transferase, family 2
BCJMU39_5408	COG0488	(ABC) transporter
BCJMU39_5413	COG0463	Glycosyl transferase, family 2
BCJMU39_5414	COG1309	transcriptional regulator
BCJMU39_5415	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
BCJMU39_5416	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
BCJMU39_5416	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
BCJMU39_5417	COG0628	permease
BCJMU39_5420	COG3279	Response regulator of the LytR AlgR family
BCJMU39_5421	COG3275	phosphorelay sensor kinase activity
BCJMU39_5422	COG2814	Major facilitator Superfamily
BCJMU39_5423	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
BCJMU39_5424	COG4362	Belongs to the NOS family. Bacterial NOS oxygenase subfamily
BCJMU39_5425	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
BCJMU39_5436	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
BCJMU39_5437	COG1272	protein, Hemolysin III
BCJMU39_5443	COG1164	Oligoendopeptidase f
BCJMU39_5445	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
BCJMU39_5453	COG4974	Belongs to the 'phage' integrase family
BCJMU39_5466	COG1196	nuclear chromosome segregation
BCJMU39_5470	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
BCJMU39_5471	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
BCJMU39_5472	COG4853	Protein conserved in bacteria
BCJMU39_5473	COG4863	YycH protein
BCJMU39_5474	COG5002	protein histidine kinase activity
BCJMU39_5475	COG0745	RESPONSE REGULATOR receiver
BCJMU39_5477	COG0305	Participates in initiation and elongation during chromosome replication
BCJMU39_5479	COG3887	signaling protein consisting of a modified GGDEF domain and a DHH domain
BCJMU39_5480	COG4241	membrane
BCJMU39_5482	COG0629	single-stranded DNA binding
BCJMU39_5484	COG0012	GTP binding
BCJMU39_5485	COG4481	Protein conserved in bacteria
BCJMU39_5486	COG0668	transmembrane transport
BCJMU39_5488	COG1475	DNA binding
BCJMU39_5489	COG1192	Involved in chromosome partitioning
BCJMU39_5494	COG1847	R3H domain protein
BCJMU39_5495	COG0706	membrane insertase activity
BCJMU39_5497	COG0230	Belongs to the bacterial ribosomal protein bL34 family
BCJMU39_p1017	COG2801	Transposase and inactivated derivatives
BCJMU39_p1018	COG2963	transposase activity
BCJMU39_p1068	COG1609	Transcriptional regulator
BCJMU39_p1069	COG1263	PTS System
BCJMU39_p1069	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BCJMU39_p1070	COG1621	beta-fructofuranosidase activity
BCJMU39_p1071	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BCJMU39_p1079	COG2311	Membrane
BCJMU39_p1085	COG0776	regulation of translation
BCJMU39_p1094	COG2002	toxin-antitoxin pair type II binding
BCJMU39_p1098	COG0747	negative chemotaxis
BCJMU39_p1099	COG4166	transmembrane transport
BCJMU39_p1103	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
BCJMU39_p1120	COG0789	Transcriptional regulator
BCJMU39_p1132	COG0697	spore germination
BCJMU39_p1137	COG2323	membrane
BCJMU39_p1140	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
BCJMU39_p1149	COG0860	N-Acetylmuramoyl-L-alanine amidase
BCJMU39_p1152	COG3708	Transcriptional regulator
BCJMU39_p1152	COG2207	Transcriptional regulator
BCJMU39_p1160	COG1733	regulation of RNA biosynthetic process
BCJMU39_p1162	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
BCJMU39_p1164	COG2918	glutathione biosynthetic process
BCJMU39_p1164	COG1181	Belongs to the D-alanine--D-alanine ligase family
BCJMU39_p1174	COG1335	isochorismatase
BCJMU39_p1175	COG4990	cell redox homeostasis
BCJMU39_p1176	COG0745	RESPONSE REGULATOR receiver
BCJMU39_p1178	COG5002	protein histidine kinase activity
BCJMU39_p1184	COG4974	Belongs to the 'phage' integrase family
BCJMU39_p1187	COG0457	Tetratricopeptide repeat
BCJMU39_p1211	COG3344	reverse transcriptase
BCJMU39_p1215	COG3344	reverse transcriptase
BCJMU39_p1229	COG1396	sequence-specific DNA binding
BCJMU39_p1236	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
BCJMU39_p1237	COG0582	viral genome integration into host DNA
BCJMU39_p1243	COG2003	Belongs to the UPF0758 family
BCJMU39_p1246	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
BCJMU39_p1257	COG3397	chitin binding
BCJMU39_p1265	COG3103	Sh3 type 3 domain protein
BCJMU39_p1265	COG0791	NLP P60 protein
BCJMU39_p1265	COG1388	LysM domain
BCJMU39_p1276	COG0640	Transcriptional regulator
BCJMU39_p1286	COG1309	transcriptional regulator
BCJMU39_t0098	COG0544	peptidyl-prolyl cis-trans isomerase activity