locus-tag class description BCJMU07_0001 PF00308 Bacterial dnaA protein BCJMU07_0001 PF08299 Bacterial dnaA protein helix-turn-helix BCJMU07_0001 PF11638 DnaA N-terminal domain BCJMU07_0002 PF00712 DNA polymerase III beta subunit, N-terminal domain BCJMU07_0002 PF02767 DNA polymerase III beta subunit, central domain BCJMU07_0002 PF02768 DNA polymerase III beta subunit, C-terminal domain BCJMU07_0004 PF02463 RecF/RecN/SMC N terminal domain BCJMU07_0005 PF01751 Toprim domain BCJMU07_0005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCJMU07_0005 PF00986 DNA gyrase B subunit, carboxyl terminus BCJMU07_0005 PF00204 DNA gyrase B BCJMU07_0006 PF03989 DNA gyrase C-terminal domain, beta-propeller BCJMU07_0006 PF00521 DNA gyrase/topoisomerase IV, subunit A BCJMU07_0007 PF14175 YaaC-like Protein BCJMU07_0008 PF00571 CBS domain BCJMU07_0008 PF00478 IMP dehydrogenase / GMP reductase domain BCJMU07_0009 PF07943 Penicillin-binding protein 5, C-terminal domain BCJMU07_0009 PF00768 D-alanyl-D-alanine carboxypeptidase BCJMU07_0010 PF01680 SOR/SNZ family BCJMU07_0011 PF01174 SNO glutamine amidotransferase family BCJMU07_0012 PF02403 Seryl-tRNA synthetase N-terminal domain BCJMU07_0012 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BCJMU07_0014 PF01712 Deoxynucleoside kinase BCJMU07_0015 PF01712 Deoxynucleoside kinase BCJMU07_0016 PF00857 Isochorismatase family BCJMU07_0017 PF14437 MafB19-like deaminase BCJMU07_0018 PF12169 DNA polymerase III subunits gamma and tau domain III BCJMU07_0019 PF02575 YbaB/EbfC DNA-binding family BCJMU07_0020 PF02132 RecR protein BCJMU07_0020 PF13662 Toprim domain BCJMU07_0021 PF10704 Protein of unknown function (DUF2508) BCJMU07_0022 PF07441 SigmaK-factor processing regulatory protein BofA BCJMU07_0024 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain BCJMU07_0024 PF01276 Orn/Lys/Arg decarboxylase, major domain BCJMU07_0025 PF02223 Thymidylate kinase BCJMU07_0026 PF09115 DNA polymerase III, delta subunit, C terminal BCJMU07_0027 PF04468 PSP1 C-terminal conserved region BCJMU07_0028 PF06156 Initiation control protein YabA BCJMU07_0029 PF05175 Methyltransferase small domain BCJMU07_0030 PF01541 GIY-YIG catalytic domain BCJMU07_0031 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BCJMU07_0032 PF18277 AbrB C-terminal domain BCJMU07_0032 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin BCJMU07_0033 PF01588 Putative tRNA binding domain BCJMU07_0033 PF09334 tRNA synthetases class I (M) BCJMU07_0033 PF08264 Anticodon-binding domain of tRNA BCJMU07_0034 PF01026 TatD related DNase BCJMU07_0035 PF13662 Toprim domain BCJMU07_0035 PF13331 Domain of unknown function (DUF4093) BCJMU07_0036 PF00398 Ribosomal RNA adenine dimethylase BCJMU07_0037 PF05582 YabG peptidase U57 BCJMU07_0038 PF06257 Biofilm formation stimulator VEG BCJMU07_0039 PF00269 Small, acid-soluble spore proteins, alpha/beta type BCJMU07_0040 PF00288 GHMP kinases N terminal domain BCJMU07_0040 PF08544 GHMP kinases C terminal BCJMU07_0041 PF00156 Phosphoribosyl transferase domain BCJMU07_0041 PF09182 Bacterial purine repressor, N-terminal BCJMU07_0042 PF01042 Endoribonuclease L-PSP BCJMU07_0043 PF04026 SpoVG BCJMU07_0044 PF00483 Nucleotidyl transferase BCJMU07_0044 PF00132 Bacterial transferase hexapeptide (six repeats) BCJMU07_0045 PF14572 Phosphoribosyl synthetase-associated domain BCJMU07_0045 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase BCJMU07_0046 PF01195 Peptidyl-tRNA hydrolase BCJMU07_0048 PF03461 TRCF domain BCJMU07_0048 PF00270 DEAD/DEAH box helicase BCJMU07_0048 PF02559 CarD-like/TRCF domain BCJMU07_0048 PF17757 UvrB interaction domain BCJMU07_0048 PF00271 Helicase conserved C-terminal domain BCJMU07_0049 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin BCJMU07_0049 PF15714 Stage V sporulation protein T C-terminal, transcription factor BCJMU07_0050 PF01943 Polysaccharide biosynthesis protein BCJMU07_0050 PF14667 Polysaccharide biosynthesis C-terminal domain BCJMU07_0051 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BCJMU07_0051 PF03819 MazG nucleotide pyrophosphohydrolase domain BCJMU07_0052 PF01479 S4 domain BCJMU07_0053 PF07873 YabP family BCJMU07_0054 PF09578 Spore cortex protein YabQ (Spore_YabQ) BCJMU07_0056 PF00575 S1 RNA binding domain BCJMU07_0057 PF07228 Stage II sporulation protein E (SpoIIE) BCJMU07_0058 PF01171 PP-loop family BCJMU07_0058 PF09179 TilS substrate binding domain BCJMU07_0058 PF11734 TilS substrate C-terminal domain BCJMU07_0059 PF00156 Phosphoribosyl transferase domain BCJMU07_0060 PF17862 AAA+ lid domain BCJMU07_0060 PF06480 FtsH Extracellular BCJMU07_0060 PF01434 Peptidase family M41 BCJMU07_0060 PF00004 ATPase family associated with various cellular activities (AAA) BCJMU07_0061 PF03309 Type III pantothenate kinase BCJMU07_0062 PF01430 Hsp33 protein BCJMU07_0063 PF00291 Pyridoxal-phosphate dependent enzyme BCJMU07_0064 PF00425 chorismate binding enzyme BCJMU07_0064 PF04715 Anthranilate synthase component I, N terminal region BCJMU07_0065 PF00117 Glutamine amidotransferase class-I BCJMU07_0066 PF01063 Amino-transferase class IV BCJMU07_0067 PF00809 Pterin binding enzyme BCJMU07_0068 PF02152 Dihydroneopterin aldolase BCJMU07_0069 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) BCJMU07_0070 PF01381 Helix-turn-helix BCJMU07_0071 PF01207 Dihydrouridine synthase (Dus) BCJMU07_0072 PF00152 tRNA synthetases class II (D, K and N) BCJMU07_0072 PF01336 OB-fold nucleic acid binding domain BCJMU07_0073 PF05848 CtsR N-terminal HTH domain BCJMU07_0073 PF17727 CtsR C-terminal dimerization domain BCJMU07_0074 PF02151 UvrB/uvrC motif BCJMU07_0075 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain BCJMU07_0076 PF00004 ATPase family associated with various cellular activities (AAA) BCJMU07_0076 PF07724 AAA domain (Cdc48 subfamily) BCJMU07_0076 PF02861 Clp amino terminal domain, pathogenicity island component BCJMU07_0076 PF10431 C-terminal, D2-small domain, of ClpB protein BCJMU07_0076 PF17871 AAA lid domain BCJMU07_0077 PF18073 Rubredoxin metal binding domain BCJMU07_0078 PF02457 DisA bacterial checkpoint controller nucleotide-binding BCJMU07_0078 PF10635 DisA bacterial checkpoint controller linker region BCJMU07_0080 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase BCJMU07_0081 PF02542 YgbB family BCJMU07_0082 PF00749 tRNA synthetases class I (E and Q), catalytic domain BCJMU07_0083 PF06426 Serine acetyltransferase, N-terminal BCJMU07_0083 PF00132 Bacterial transferase hexapeptide (six repeats) BCJMU07_0084 PF01406 tRNA synthetases class I (C) catalytic domain BCJMU07_0084 PF09190 DALR domain BCJMU07_0085 PF00636 Ribonuclease III domain BCJMU07_0086 PF08032 RNA 2'-O ribose methyltransferase substrate binding BCJMU07_0086 PF00588 SpoU rRNA Methylase family BCJMU07_0087 PF05991 YacP-like NYN domain BCJMU07_0088 PF04542 Sigma-70 region 2 BCJMU07_0088 PF08281 Sigma-70, region 4 BCJMU07_0089 PF00584 SecE/Sec61-gamma subunits of protein translocation complex BCJMU07_0090 PF02357 Transcription termination factor nusG BCJMU07_0090 PF00467 KOW motif BCJMU07_0091 PF03946 Ribosomal protein L11, N-terminal domain BCJMU07_0091 PF00298 Ribosomal protein L11, RNA binding domain BCJMU07_0092 PF00687 Ribosomal protein L1p/L10e family BCJMU07_0093 PF00466 Ribosomal protein L10 BCJMU07_0094 PF16320 Ribosomal protein L7/L12 dimerisation domain BCJMU07_0094 PF00542 Ribosomal protein L7/L12 C-terminal domain BCJMU07_0095 PF05175 Methyltransferase small domain BCJMU07_0096 PF04560 RNA polymerase Rpb2, domain 7 BCJMU07_0096 PF00562 RNA polymerase Rpb2, domain 6 BCJMU07_0096 PF10385 RNA polymerase beta subunit external 1 domain BCJMU07_0096 PF04565 RNA polymerase Rpb2, domain 3 BCJMU07_0096 PF04561 RNA polymerase Rpb2, domain 2 BCJMU07_0096 PF04563 RNA polymerase beta subunit BCJMU07_0097 PF04998 RNA polymerase Rpb1, domain 5 BCJMU07_0097 PF04997 RNA polymerase Rpb1, domain 1 BCJMU07_0097 PF05000 RNA polymerase Rpb1, domain 4 BCJMU07_0097 PF00623 RNA polymerase Rpb1, domain 2 BCJMU07_0097 PF04983 RNA polymerase Rpb1, domain 3 BCJMU07_0098 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family BCJMU07_0099 PF00164 Ribosomal protein S12/S23 BCJMU07_0100 PF00177 Ribosomal protein S7p/S5e BCJMU07_0101 PF00679 Elongation factor G C-terminus BCJMU07_0101 PF14492 Elongation Factor G, domain II BCJMU07_0101 PF03764 Elongation factor G, domain IV BCJMU07_0101 PF00009 Elongation factor Tu GTP binding domain BCJMU07_0101 PF03144 Elongation factor Tu domain 2 BCJMU07_0102 PF00009 Elongation factor Tu GTP binding domain BCJMU07_0102 PF03143 Elongation factor Tu C-terminal domain BCJMU07_0102 PF03144 Elongation factor Tu domain 2 BCJMU07_0103 PF00338 Ribosomal protein S10p/S20e BCJMU07_0104 PF00297 Ribosomal protein L3 BCJMU07_0105 PF00573 Ribosomal protein L4/L1 family BCJMU07_0106 PF00276 Ribosomal protein L23 BCJMU07_0107 PF03947 Ribosomal Proteins L2, C-terminal domain BCJMU07_0107 PF00181 Ribosomal Proteins L2, RNA binding domain BCJMU07_0108 PF00203 Ribosomal protein S19 BCJMU07_0109 PF00237 Ribosomal protein L22p/L17e BCJMU07_0110 PF00189 Ribosomal protein S3, C-terminal domain BCJMU07_0110 PF07650 KH domain BCJMU07_0111 PF00252 Ribosomal protein L16p/L10e BCJMU07_0112 PF00831 Ribosomal L29 protein BCJMU07_0113 PF00366 Ribosomal protein S17 BCJMU07_0114 PF00238 Ribosomal protein L14p/L23e BCJMU07_0115 PF00467 KOW motif BCJMU07_0115 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 BCJMU07_0116 PF00281 Ribosomal protein L5 BCJMU07_0116 PF00673 ribosomal L5P family C-terminus BCJMU07_0117 PF00253 Ribosomal protein S14p/S29e BCJMU07_0118 PF00410 Ribosomal protein S8 BCJMU07_0119 PF00347 Ribosomal protein L6 BCJMU07_0120 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast BCJMU07_0121 PF03719 Ribosomal protein S5, C-terminal domain BCJMU07_0121 PF00333 Ribosomal protein S5, N-terminal domain BCJMU07_0122 PF00327 Ribosomal protein L30p/L7e BCJMU07_0123 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A BCJMU07_0124 PF00344 SecY translocase BCJMU07_0125 PF05191 Adenylate kinase, active site lid BCJMU07_0126 PF00557 Metallopeptidase family M24 BCJMU07_0127 PF01176 Translation initiation factor 1A / IF-1 BCJMU07_0128 PF00416 Ribosomal protein S13/S18 BCJMU07_0129 PF00411 Ribosomal protein S11 BCJMU07_0130 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain BCJMU07_0130 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain BCJMU07_0130 PF01000 RNA polymerase Rpb3/RpoA insert domain BCJMU07_0131 PF01196 Ribosomal protein L17 BCJMU07_0132 PF00005 ABC transporter BCJMU07_0133 PF00005 ABC transporter BCJMU07_0134 PF02361 Cobalt transport protein BCJMU07_0135 PF01416 tRNA pseudouridine synthase BCJMU07_0136 PF00572 Ribosomal protein L13 BCJMU07_0137 PF00380 Ribosomal protein S9/S16 BCJMU07_0139 PF01520 N-acetylmuramoyl-L-alanine amidase BCJMU07_0140 PF10609 NUBPL iron-transfer P-loop NTPase BCJMU07_0141 PF17898 Spore germination GerD central core domain BCJMU07_0142 PF14089 KinB-signalling pathway activation in sporulation BCJMU07_0143 PF01522 Polysaccharide deacetylase BCJMU07_0145 PF02595 Glycerate kinase family BCJMU07_0147 PF00491 Arginase family BCJMU07_0148 PF02457 DisA bacterial checkpoint controller nucleotide-binding BCJMU07_0149 PF07949 YbbR-like protein BCJMU07_0150 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BCJMU07_0150 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BCJMU07_0150 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BCJMU07_0150 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BCJMU07_0152 PF01380 SIS domain BCJMU07_0156 PF08722 TnsA endonuclease N terminal BCJMU07_0156 PF08721 TnsA endonuclease C terminal BCJMU07_0157 PF00665 Integrase core domain BCJMU07_0158 PF11426 Tn7 transposition regulator TnsC BCJMU07_0158 PF13401 AAA domain BCJMU07_0165 PF00392 Bacterial regulatory proteins, gntR family BCJMU07_0165 PF07729 FCD domain BCJMU07_0166 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BCJMU07_0166 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BCJMU07_0167 PF02447 GntP family permease BCJMU07_0168 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain BCJMU07_0168 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BCJMU07_0169 PF07676 WD40-like Beta Propeller Repeat BCJMU07_0169 PF00326 Prolyl oligopeptidase family BCJMU07_0176 PF00528 Binding-protein-dependent transport system inner membrane component BCJMU07_0177 PF09383 NIL domain BCJMU07_0177 PF00005 ABC transporter BCJMU07_0178 PF03180 NLPA lipoprotein BCJMU07_0179 PF00107 Zinc-binding dehydrogenase BCJMU07_0179 PF08240 Alcohol dehydrogenase GroES-like domain BCJMU07_0181 PF01565 FAD binding domain BCJMU07_0182 PF07690 Major Facilitator Superfamily BCJMU07_0184 PF07690 Major Facilitator Superfamily BCJMU07_0187 PF00528 Binding-protein-dependent transport system inner membrane component BCJMU07_0188 PF12911 N-terminal TM domain of oligopeptide transport permease C BCJMU07_0188 PF00528 Binding-protein-dependent transport system inner membrane component BCJMU07_0189 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BCJMU07_0189 PF00005 ABC transporter BCJMU07_0190 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BCJMU07_0190 PF00005 ABC transporter BCJMU07_0191 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BCJMU07_0193 PF12833 Helix-turn-helix domain BCJMU07_0196 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BCJMU07_0197 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BCJMU07_0198 PF00248 Aldo/keto reductase family BCJMU07_0199 PF14748 Pyrroline-5-carboxylate reductase dimerisation BCJMU07_0199 PF03807 NADP oxidoreductase coenzyme F420-dependent BCJMU07_0200 PF04973 Nicotinamide mononucleotide transporter BCJMU07_0201 PF06800 Sugar transport protein BCJMU07_0202 PF00528 Binding-protein-dependent transport system inner membrane component BCJMU07_0205 PF12727 PBP superfamily domain BCJMU07_0205 PF12728 Helix-turn-helix domain BCJMU07_0206 PF03466 LysR substrate binding domain BCJMU07_0206 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BCJMU07_0207 PF00892 EamA-like transporter family BCJMU07_0208 PF14142 YrzO-like protein BCJMU07_0209 PF01553 Acyltransferase BCJMU07_0210 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BCJMU07_0210 PF00356 Bacterial regulatory proteins, lacI family BCJMU07_0212 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BCJMU07_0212 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BCJMU07_0216 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) BCJMU07_0221 PF00005 ABC transporter BCJMU07_0221 PF16326 ABC transporter C-terminal domain BCJMU07_0221 PF12848 ABC transporter BCJMU07_0223 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BCJMU07_0224 PF00528 Binding-protein-dependent transport system inner membrane component BCJMU07_0225 PF00528 Binding-protein-dependent transport system inner membrane component BCJMU07_0225 PF12911 N-terminal TM domain of oligopeptide transport permease C BCJMU07_0226 PF00005 ABC transporter BCJMU07_0226 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BCJMU07_0227 PF00005 ABC transporter BCJMU07_0227 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BCJMU07_0231 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BCJMU07_0232 PF01557 Fumarylacetoacetate (FAA) hydrolase family BCJMU07_0234 PF07690 Major Facilitator Superfamily BCJMU07_0235 PF07478 D-ala D-ala ligase C-terminus BCJMU07_0235 PF01820 D-ala D-ala ligase N-terminus BCJMU07_0236 PF08245 Mur ligase middle domain BCJMU07_0236 PF01225 Mur ligase family, catalytic domain BCJMU07_0236 PF02875 Mur ligase family, glutamate ligase domain BCJMU07_0237 PF00270 DEAD/DEAH box helicase BCJMU07_0237 PF00271 Helicase conserved C-terminal domain BCJMU07_0238 PF03851 UV-endonuclease UvdE BCJMU07_0239 PF01694 Rhomboid family BCJMU07_0240 PF01648 4'-phosphopantetheinyl transferase superfamily BCJMU07_0242 PF01168 Alanine racemase, N-terminal domain BCJMU07_0242 PF00842 Alanine racemase, C-terminal domain BCJMU07_0243 PF01402 Ribbon-helix-helix protein, copG family BCJMU07_0244 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system BCJMU07_0245 PF09371 Tex-like protein N-terminal domain BCJMU07_0245 PF00575 S1 RNA binding domain BCJMU07_0245 PF17674 HHH domain BCJMU07_0245 PF16921 Tex protein YqgF-like domain BCJMU07_0246 PF10263 SprT-like family BCJMU07_0246 PF17283 SprT-like zinc ribbon domain BCJMU07_0247 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE BCJMU07_0248 PF00814 Glycoprotease family BCJMU07_0249 PF00583 Acetyltransferase (GNAT) family BCJMU07_0250 PF00814 Glycoprotease family BCJMU07_0251 PF12848 ABC transporter BCJMU07_0251 PF16326 ABC transporter C-terminal domain BCJMU07_0251 PF00005 ABC transporter BCJMU07_0252 PF02629 CoA binding domain BCJMU07_0252 PF06971 Putative DNA-binding protein N-terminus BCJMU07_0254 PF02517 CPBP intramembrane metalloprotease BCJMU07_0255 PF00166 Chaperonin 10 Kd subunit BCJMU07_0256 PF00118 TCP-1/cpn60 chaperonin family BCJMU07_0257 PF14659 Phage integrase, N-terminal SAM-like domain BCJMU07_0257 PF00589 Phage integrase family BCJMU07_0259 PF06114 IrrE N-terminal-like domain BCJMU07_0260 PF01381 Helix-turn-helix BCJMU07_0264 PF06125 Bacterial protein of unknown function (DUF961) BCJMU07_0266 PF02486 Replication initiation factor BCJMU07_0266 PF18106 Rolling Circle replication initiation protein N-terminal domain BCJMU07_0269 PF12642 Conjugative transposon protein TcpC BCJMU07_0271 PF12648 TcpE family BCJMU07_0274 PF00877 NlpC/P60 family BCJMU07_0276 PF14729 Domain of unknown function with cystatin-like fold (DUF4467) BCJMU07_0277 PF12161 HsdM N-terminal domain BCJMU07_0277 PF02384 N-6 DNA Methylase BCJMU07_0279 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) BCJMU07_0279 PF12008 Type I restriction and modification enzyme - subunit R C terminal BCJMU07_0279 PF18766 SWI2/SNF2 ATPase BCJMU07_0282 PF03050 Transposase IS66 family BCJMU07_0282 PF13817 IS66 C-terminal element BCJMU07_0282 PF13007 Transposase C of IS166 homeodomain BCJMU07_0282 PF13005 zinc-finger binding domain of transposase IS66 BCJMU07_0283 PF05067 Manganese containing catalase BCJMU07_0286 PF00772 DnaB-like helicase N terminal domain BCJMU07_0286 PF03796 DnaB-like helicase C terminal domain BCJMU07_0293 PF04740 LXG domain of WXG superfamily BCJMU07_0293 PF14449 Pre-toxin TG BCJMU07_0295 PF02540 NAD synthase BCJMU07_0295 PF00958 GMP synthase C terminal domain BCJMU07_0295 PF00117 Glutamine amidotransferase class-I BCJMU07_0296 PF00860 Permease family BCJMU07_0297 PF00486 Transcriptional regulatory protein, C terminal BCJMU07_0297 PF00072 Response regulator receiver domain BCJMU07_0298 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCJMU07_0298 PF00512 His Kinase A (phospho-acceptor) domain BCJMU07_0298 PF00989 PAS fold BCJMU07_0298 PF16736 Single Cache-like BCJMU07_0300 PF01323 DSBA-like thioredoxin domain BCJMU07_0301 PF02673 Bacitracin resistance protein BacA BCJMU07_0303 PF00005 ABC transporter BCJMU07_0304 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCJMU07_0304 PF00512 His Kinase A (phospho-acceptor) domain BCJMU07_0305 PF00072 Response regulator receiver domain BCJMU07_0305 PF00486 Transcriptional regulatory protein, C terminal BCJMU07_0306 PF00892 EamA-like transporter family BCJMU07_0308 PF00731 AIR carboxylase BCJMU07_0309 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain BCJMU07_0309 PF02222 ATP-grasp domain BCJMU07_0310 PF10397 Adenylosuccinate lyase C-terminus BCJMU07_0310 PF00206 Lyase BCJMU07_0311 PF01259 SAICAR synthetase BCJMU07_0312 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase BCJMU07_0314 PF00586 AIR synthase related protein, N-terminal domain BCJMU07_0314 PF02769 AIR synthase related protein, C-terminal domain BCJMU07_0314 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain BCJMU07_0315 PF00156 Phosphoribosyl transferase domain BCJMU07_0316 PF02769 AIR synthase related protein, C-terminal domain BCJMU07_0316 PF00586 AIR synthase related protein, N-terminal domain BCJMU07_0317 PF00551 Formyl transferase BCJMU07_0318 PF02142 MGS-like domain BCJMU07_0318 PF01808 AICARFT/IMPCHase bienzyme BCJMU07_0319 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain BCJMU07_0319 PF02843 Phosphoribosylglycinamide synthetase, C domain BCJMU07_0319 PF02844 Phosphoribosylglycinamide synthetase, N domain BCJMU07_0323 PF01884 PcrB family BCJMU07_0324 PF13361 UvrD-like helicase C-terminal domain BCJMU07_0324 PF00580 UvrD/REP helicase N-terminal domain BCJMU07_0325 PF01653 NAD-dependent DNA ligase adenylation domain BCJMU07_0325 PF12826 Helix-hairpin-helix motif BCJMU07_0325 PF03119 NAD-dependent DNA ligase C4 zinc finger domain BCJMU07_0325 PF03120 NAD-dependent DNA ligase OB-fold domain BCJMU07_0325 PF00533 BRCA1 C Terminus (BRCT) domain BCJMU07_0326 PF07537 CamS sex pheromone cAM373 precursor BCJMU07_0327 PF01925 Sulfite exporter TauE/SafE BCJMU07_0328 PF00171 Aldehyde dehydrogenase family BCJMU07_0330 PF00857 Isochorismatase family BCJMU07_0332 PF00005 ABC transporter BCJMU07_0332 PF09383 NIL domain BCJMU07_0333 PF00528 Binding-protein-dependent transport system inner membrane component BCJMU07_0334 PF03180 NLPA lipoprotein BCJMU07_0336 PF17886 HSP20-like domain found in ArsA BCJMU07_0336 PF02374 Anion-transporting ATPase BCJMU07_0337 PF01047 MarR family BCJMU07_0338 PF05360 yiaA/B two helix domain BCJMU07_0339 PF02686 Glu-tRNAGln amidotransferase C subunit BCJMU07_0340 PF01425 Amidase BCJMU07_0341 PF02637 GatB domain BCJMU07_0341 PF02934 GatB/GatE catalytic domain BCJMU07_0342 PF00781 Diacylglycerol kinase catalytic domain BCJMU07_0343 PF13419 Haloacid dehalogenase-like hydrolase BCJMU07_0344 PF00202 Aminotransferase class-III BCJMU07_0345 PF00158 Sigma-54 interaction domain BCJMU07_0346 PF00171 Aldehyde dehydrogenase family BCJMU07_0347 PF00893 Small Multidrug Resistance protein BCJMU07_0348 PF02073 Thermophilic metalloprotease (M29) BCJMU07_0350 PF01773 Na+ dependent nucleoside transporter N-terminus BCJMU07_0350 PF07662 Na+ dependent nucleoside transporter C-terminus BCJMU07_0350 PF07670 Nucleoside recognition BCJMU07_0351 PF05958 tRNA (Uracil-5-)-methyltransferase BCJMU07_0351 PF01938 TRAM domain BCJMU07_0351 PF02475 Met-10+ like-protein BCJMU07_0352 PF01207 Dihydrouridine synthase (Dus) BCJMU07_0354 PF00512 His Kinase A (phospho-acceptor) domain BCJMU07_0354 PF00989 PAS fold BCJMU07_0354 PF13188 PAS domain BCJMU07_0354 PF13426 PAS domain BCJMU07_0354 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCJMU07_0355 PF07308 Protein of unknown function (DUF1456) BCJMU07_0358 PF13378 Enolase C-terminal domain-like BCJMU07_0358 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BCJMU07_0360 PF03553 Na+/H+ antiporter family BCJMU07_0361 PF07687 Peptidase dimerisation domain BCJMU07_0361 PF01546 Peptidase family M20/M25/M40 BCJMU07_0363 PF13192 Thioredoxin domain BCJMU07_0363 PF07992 Pyridine nucleotide-disulphide oxidoreductase BCJMU07_0364 PF00578 AhpC/TSA family BCJMU07_0365 PF01636 Phosphotransferase enzyme family BCJMU07_0366 PF01008 Initiation factor 2 subunit family BCJMU07_0367 PF00596 Class II Aldolase and Adducin N-terminal domain BCJMU07_0369 PF01032 FecCD transport family BCJMU07_0370 PF01032 FecCD transport family BCJMU07_0371 PF01497 Periplasmic binding protein BCJMU07_0373 PF07992 Pyridine nucleotide-disulphide oxidoreductase BCJMU07_0375 PF12728 Helix-turn-helix domain BCJMU07_0380 PF00989 PAS fold BCJMU07_0380 PF13188 PAS domain BCJMU07_0380 PF13426 PAS domain BCJMU07_0380 PF00512 His Kinase A (phospho-acceptor) domain BCJMU07_0380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCJMU07_0384 PF10127 RNA repair pathway DNA polymerase beta family BCJMU07_0385 PF07690 Major Facilitator Superfamily BCJMU07_0386 PF00355 Rieske [2Fe-2S] domain BCJMU07_0386 PF01266 FAD dependent oxidoreductase BCJMU07_0388 PF00528 Binding-protein-dependent transport system inner membrane component BCJMU07_0389 PF00497 Bacterial extracellular solute-binding proteins, family 3 BCJMU07_0390 PF00005 ABC transporter BCJMU07_0391 PF02743 Cache domain BCJMU07_0391 PF00672 HAMP domain BCJMU07_0391 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BCJMU07_0392 PF00128 Alpha amylase, catalytic domain BCJMU07_0392 PF16657 Maltogenic Amylase, C-terminal domain BCJMU07_0393 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BCJMU07_0393 PF00367 phosphotransferase system, EIIB BCJMU07_0393 PF02378 Phosphotransferase system, EIIC BCJMU07_0394 PF03372 Endonuclease/Exonuclease/phosphatase family BCJMU07_0395 PF01061 ABC-2 type transporter BCJMU07_0396 PF01131 DNA topoisomerase BCJMU07_0396 PF01751 Toprim domain BCJMU07_0397 PF02110 Hydroxyethylthiazole kinase family BCJMU07_0398 PF02581 Thiamine monophosphate synthase BCJMU07_0399 PF03605 Anaerobic c4-dicarboxylate membrane transporter BCJMU07_0400 PF00672 HAMP domain BCJMU07_0400 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BCJMU07_0401 PF01910 Thiamine-binding protein BCJMU07_0402 PF00528 Binding-protein-dependent transport system inner membrane component BCJMU07_0404 PF00005 ABC transporter BCJMU07_0405 PF00005 ABC transporter BCJMU07_0405 PF12848 ABC transporter BCJMU07_0406 PF00041 Fibronectin type III domain BCJMU07_0406 PF00704 Glycosyl hydrolases family 18 BCJMU07_0411 PF00440 Bacterial regulatory proteins, tetR family BCJMU07_0411 PF08360 QacR-like protein, C-terminal region BCJMU07_0415 PF11700 Vacuole effluxer Atg22 like BCJMU07_0418 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BCJMU07_0418 PF09180 Prolyl-tRNA synthetase, C-terminal BCJMU07_0418 PF03129 Anticodon binding domain BCJMU07_0420 PF00480 ROK family BCJMU07_0421 PF02342 TerD domain BCJMU07_0422 PF02342 TerD domain BCJMU07_0423 PF02342 TerD domain BCJMU07_0424 PF03741 Integral membrane protein TerC family BCJMU07_0425 PF14266 Putative component of 'biosynthetic module' BCJMU07_0426 PF05816 Toxic anion resistance protein (TelA) BCJMU07_0427 PF00689 Cation transporting ATPase, C-terminus BCJMU07_0427 PF00690 Cation transporter/ATPase, N-terminus BCJMU07_0428 PF06569 Protein of unknown function (DUF1128) BCJMU07_0429 PF01451 Low molecular weight phosphotyrosine protein phosphatase BCJMU07_0431 PF03631 Virulence factor BrkB BCJMU07_0434 PF00892 EamA-like transporter family BCJMU07_0436 PF10502 Signal peptidase, peptidase S26 BCJMU07_0438 PF09335 SNARE associated Golgi protein BCJMU07_0441 PF16242 Pyridoxamine 5'-phosphate oxidase like BCJMU07_0442 PF01699 Sodium/calcium exchanger protein BCJMU07_0443 PF14167 YfkD-like protein BCJMU07_0444 PF08756 YfkB-like domain BCJMU07_0444 PF04055 Radical SAM superfamily BCJMU07_0446 PF05683 Fumarase C-terminus BCJMU07_0446 PF05681 Fumarate hydratase (Fumerase) BCJMU07_0447 PF01522 Polysaccharide deacetylase BCJMU07_0448 PF00730 HhH-GPD superfamily base excision DNA repair protein BCJMU07_0449 PF05958 tRNA (Uracil-5-)-methyltransferase BCJMU07_0449 PF01938 TRAM domain BCJMU07_0450 PF01416 tRNA pseudouridine synthase BCJMU07_0452 PF13426 PAS domain BCJMU07_0452 PF02954 Bacterial regulatory protein, Fis family BCJMU07_0452 PF00158 Sigma-54 interaction domain BCJMU07_0454 PF00324 Amino acid permease BCJMU07_0455 PF01546 Peptidase family M20/M25/M40 BCJMU07_0455 PF07687 Peptidase dimerisation domain BCJMU07_0460 PF04960 Glutaminase BCJMU07_0461 PF02378 Phosphotransferase system, EIIC BCJMU07_0461 PF00367 phosphotransferase system, EIIB BCJMU07_0462 PF00144 Beta-lactamase BCJMU07_0465 PF00535 Glycosyl transferase family 2 BCJMU07_0467 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BCJMU07_0467 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BCJMU07_0467 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BCJMU07_0468 PF01370 NAD dependent epimerase/dehydratase family BCJMU07_0468 PF02911 Formyl transferase, C-terminal domain BCJMU07_0468 PF00551 Formyl transferase BCJMU07_0469 PF00535 Glycosyl transferase family 2 BCJMU07_0470 PF02901 Pyruvate formate lyase-like BCJMU07_0470 PF01228 Glycine radical BCJMU07_0471 PF04055 Radical SAM superfamily BCJMU07_0473 PF04101 Glycosyltransferase family 28 C-terminal domain BCJMU07_0473 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase BCJMU07_0476 PF01979 Amidohydrolase family BCJMU07_0477 PF01370 NAD dependent epimerase/dehydratase family BCJMU07_0477 PF08338 Domain of unknown function (DUF1731) BCJMU07_0478 PF02631 RecX family BCJMU07_0481 PF08176 Small acid-soluble spore protein K family BCJMU07_0482 PF14043 WVELL protein BCJMU07_0483 PF04307 LexA-binding, inner membrane-associated putative hydrolase BCJMU07_0484 PF00730 HhH-GPD superfamily base excision DNA repair protein BCJMU07_0484 PF14815 NUDIX domain BCJMU07_0486 PF04259 Small, acid-soluble spore protein, gamma-type BCJMU07_0487 PF14182 YgaB-like protein BCJMU07_0488 PF04167 Protein of unknown function (DUF402) BCJMU07_0489 PF00664 ABC transporter transmembrane region BCJMU07_0489 PF00005 ABC transporter BCJMU07_0490 PF06081 Aromatic acid exporter family member 1 BCJMU07_0491 PF01493 GXGXG motif BCJMU07_0491 PF00310 Glutamine amidotransferases class-II BCJMU07_0491 PF04898 Glutamate synthase central domain BCJMU07_0491 PF01645 Conserved region in glutamate synthase BCJMU07_0492 PF00202 Aminotransferase class-III BCJMU07_0493 PF00005 ABC transporter BCJMU07_0496 PF07885 Ion channel BCJMU07_0497 PF00578 AhpC/TSA family BCJMU07_0498 PF01475 Ferric uptake regulator family BCJMU07_0499 PF11023 Zinc-ribbon containing domain BCJMU07_0501 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) BCJMU07_0502 PF01709 Transcriptional regulator BCJMU07_0503 PF13344 Haloacid dehalogenase-like hydrolase BCJMU07_0503 PF00293 NUDIX domain BCJMU07_0504 PF00912 Transglycosylase BCJMU07_0504 PF00905 Penicillin binding protein transpeptidase domain BCJMU07_0505 PF13462 Thioredoxin BCJMU07_0506 PF08331 Domain of unknown function (DUF1730) BCJMU07_0507 PF12671 Putative amidase domain BCJMU07_0508 PF00588 SpoU rRNA Methylase family BCJMU07_0509 PF00498 FHA domain BCJMU07_0509 PF00990 Diguanylate cyclase, GGDEF domain BCJMU07_0509 PF00563 EAL domain BCJMU07_0510 PF06798 PrkA serine protein kinase C-terminal domain BCJMU07_0510 PF08298 PrkA AAA domain BCJMU07_0511 PF04285 Protein of unknown function (DUF444) BCJMU07_0513 PF02028 BCCT, betaine/carnitine/choline family transporter BCJMU07_0514 PF08453 Peptidase family M9 N-terminal BCJMU07_0514 PF18496 Collagenase G catalytic helper subdomain BCJMU07_0514 PF01752 Collagenase BCJMU07_0516 PF15975 Flotillin BCJMU07_0516 PF01145 SPFH domain / Band 7 family BCJMU07_0517 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BCJMU07_0517 PF00672 HAMP domain BCJMU07_0517 PF02743 Cache domain BCJMU07_0518 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain BCJMU07_0518 PF17203 Single cache domain 3 BCJMU07_0518 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCJMU07_0518 PF00989 PAS fold BCJMU07_0520 PF13333 Integrase core domain BCJMU07_0520 PF00665 Integrase core domain BCJMU07_0520 PF13276 HTH-like domain BCJMU07_0521 PF00989 PAS fold BCJMU07_0521 PF17203 Single cache domain 3 BCJMU07_0521 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCJMU07_0521 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain BCJMU07_0522 PF12431 Transcriptional regulator BCJMU07_0522 PF00072 Response regulator receiver domain BCJMU07_0523 PF03600 Citrate transporter BCJMU07_0527 PF00149 Calcineurin-like phosphoesterase BCJMU07_0528 PF00486 Transcriptional regulatory protein, C terminal BCJMU07_0528 PF00072 Response regulator receiver domain BCJMU07_0529 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCJMU07_0529 PF00512 His Kinase A (phospho-acceptor) domain BCJMU07_0531 PF13529 Peptidase_C39 like family BCJMU07_0532 PF00672 HAMP domain BCJMU07_0532 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BCJMU07_0532 PF02743 Cache domain BCJMU07_0533 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCJMU07_0533 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain BCJMU07_0533 PF17203 Single cache domain 3 BCJMU07_0533 PF00989 PAS fold BCJMU07_0534 PF00072 Response regulator receiver domain BCJMU07_0535 PF03390 2-hydroxycarboxylate transporter family BCJMU07_0536 PF00390 Malic enzyme, N-terminal domain BCJMU07_0536 PF03949 Malic enzyme, NAD binding domain BCJMU07_0538 PF00892 EamA-like transporter family BCJMU07_0539 PF00155 Aminotransferase class I and II BCJMU07_0539 PF00392 Bacterial regulatory proteins, gntR family BCJMU07_0540 PF01609 Transposase DDE domain BCJMU07_0541 PF00392 Bacterial regulatory proteins, gntR family BCJMU07_0541 PF00155 Aminotransferase class I and II BCJMU07_0543 PF00989 PAS fold BCJMU07_0543 PF00512 His Kinase A (phospho-acceptor) domain BCJMU07_0543 PF18698 Histidine kinase sensor domain BCJMU07_0543 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCJMU07_0543 PF00672 HAMP domain BCJMU07_0544 PF00486 Transcriptional regulatory protein, C terminal BCJMU07_0544 PF00072 Response regulator receiver domain BCJMU07_0547 PF13508 Acetyltransferase (GNAT) domain BCJMU07_0547 PF00583 Acetyltransferase (GNAT) family BCJMU07_0548 PF02634 FdhD/NarQ family BCJMU07_0549 PF00037 4Fe-4S binding domain BCJMU07_0549 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BCJMU07_0549 PF00384 Molybdopterin oxidoreductase BCJMU07_0549 PF01568 Molydopterin dinucleotide binding domain BCJMU07_0549 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BCJMU07_0550 PF07849 Protein of unknown function (DUF1641) BCJMU07_0552 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BCJMU07_0552 PF05222 Alanine dehydrogenase/PNT, N-terminal domain BCJMU07_0553 PF13520 Amino acid permease BCJMU07_0554 PF01022 Bacterial regulatory protein, arsR family BCJMU07_0555 PF00403 Heavy-metal-associated domain BCJMU07_0556 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain BCJMU07_0556 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family BCJMU07_0556 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain BCJMU07_0559 PF07504 Fungalysin/Thermolysin Propeptide Motif BCJMU07_0559 PF03413 Peptidase propeptide and YPEB domain BCJMU07_0559 PF01447 Thermolysin metallopeptidase, catalytic domain BCJMU07_0559 PF02868 Thermolysin metallopeptidase, alpha-helical domain BCJMU07_0563 PF04294 VanW like protein BCJMU07_0564 PF03816 Cell envelope-related transcriptional attenuator domain BCJMU07_0565 PF07662 Na+ dependent nucleoside transporter C-terminus BCJMU07_0565 PF01773 Na+ dependent nucleoside transporter N-terminus BCJMU07_0566 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BCJMU07_0567 PF01595 Cyclin M transmembrane N-terminal domain BCJMU07_0567 PF00571 CBS domain BCJMU07_0567 PF03471 Transporter associated domain BCJMU07_0568 PF10415 Fumarase C C-terminus BCJMU07_0568 PF00206 Lyase BCJMU07_0569 PF02652 L-lactate permease BCJMU07_0570 PF01022 Bacterial regulatory protein, arsR family BCJMU07_0571 PF08141 Small acid-soluble spore protein H family BCJMU07_0572 PF00854 POT family BCJMU07_0573 PF01497 Periplasmic binding protein BCJMU07_0574 PF01032 FecCD transport family BCJMU07_0575 PF01032 FecCD transport family BCJMU07_0576 PF00005 ABC transporter BCJMU07_0577 PF08241 Methyltransferase domain BCJMU07_0578 PF00155 Aminotransferase class I and II BCJMU07_0579 PF01370 NAD dependent epimerase/dehydratase family BCJMU07_0580 PF00156 Phosphoribosyl transferase domain BCJMU07_0581 PF13344 Haloacid dehalogenase-like hydrolase BCJMU07_0581 PF00293 NUDIX domain BCJMU07_0582 PF00092 von Willebrand factor type A domain BCJMU07_0583 PF07728 AAA domain (dynein-related subfamily) BCJMU07_0584 PF13091 PLD-like domain BCJMU07_0584 PF13396 Phospholipase_D-nuclease N-terminal BCJMU07_0586 PF00563 EAL domain BCJMU07_0586 PF00990 Diguanylate cyclase, GGDEF domain BCJMU07_0586 PF03707 Bacterial signalling protein N terminal repeat BCJMU07_0587 PF13520 Amino acid permease BCJMU07_0588 PF00392 Bacterial regulatory proteins, gntR family BCJMU07_0588 PF07702 UTRA domain BCJMU07_0589 PF00367 phosphotransferase system, EIIB BCJMU07_0589 PF02378 Phosphotransferase system, EIIC BCJMU07_0590 PF00128 Alpha amylase, catalytic domain BCJMU07_0590 PF16657 Maltogenic Amylase, C-terminal domain BCJMU07_0593 PF03323 Bacillus/Clostridium GerA spore germination protein BCJMU07_0594 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCJMU07_0594 PF07730 Histidine kinase BCJMU07_0594 PF13492 GAF domain BCJMU07_0595 PF00072 Response regulator receiver domain BCJMU07_0595 PF00196 Bacterial regulatory proteins, luxR family BCJMU07_0596 PF05922 Peptidase inhibitor I9 BCJMU07_0596 PF02225 PA domain BCJMU07_0596 PF13860 FlgD Ig-like domain BCJMU07_0596 PF00082 Subtilase family BCJMU07_0597 PF12389 Camelysin metallo-endopeptidase BCJMU07_0599 PF01636 Phosphotransferase enzyme family BCJMU07_0600 PF01235 Sodium:alanine symporter family BCJMU07_0601 PF00005 ABC transporter BCJMU07_0602 PF00497 Bacterial extracellular solute-binding proteins, family 3 BCJMU07_0603 PF00528 Binding-protein-dependent transport system inner membrane component BCJMU07_0604 PF00528 Binding-protein-dependent transport system inner membrane component BCJMU07_0605 PF00324 Amino acid permease BCJMU07_0608 PF04542 Sigma-70 region 2 BCJMU07_0608 PF08281 Sigma-70, region 4 BCJMU07_0610 PF13280 WYL domain BCJMU07_0610 PF08279 HTH domain BCJMU07_0611 PF01872 RibD C-terminal domain BCJMU07_0612 PF00672 HAMP domain BCJMU07_0612 PF00989 PAS fold BCJMU07_0612 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCJMU07_0612 PF00512 His Kinase A (phospho-acceptor) domain BCJMU07_0612 PF18698 Histidine kinase sensor domain BCJMU07_0613 PF00072 Response regulator receiver domain BCJMU07_0613 PF00486 Transcriptional regulatory protein, C terminal BCJMU07_0615 PF01740 STAS domain BCJMU07_0615 PF00916 Sulfate permease family BCJMU07_0616 PF00582 Universal stress protein family BCJMU07_0618 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BCJMU07_0619 PF00528 Binding-protein-dependent transport system inner membrane component BCJMU07_0620 PF00528 Binding-protein-dependent transport system inner membrane component BCJMU07_0621 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BCJMU07_0621 PF00005 ABC transporter BCJMU07_0622 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BCJMU07_0622 PF00005 ABC transporter BCJMU07_0623 PF07690 Major Facilitator Superfamily BCJMU07_0624 PF01047 MarR family BCJMU07_0625 PF07690 Major Facilitator Superfamily BCJMU07_0626 PF00356 Bacterial regulatory proteins, lacI family BCJMU07_0627 PF00294 pfkB family carbohydrate kinase BCJMU07_0628 PF05025 RbsD / FucU transport protein family BCJMU07_0629 PF00005 ABC transporter BCJMU07_0630 PF02653 Branched-chain amino acid transport system / permease component BCJMU07_0631 PF13407 Periplasmic binding protein domain BCJMU07_0632 PF00923 Transaldolase/Fructose-6-phosphate aldolase BCJMU07_0633 PF05547 Immune inhibitor A peptidase M6 BCJMU07_0635 PF00107 Zinc-binding dehydrogenase BCJMU07_0635 PF08240 Alcohol dehydrogenase GroES-like domain BCJMU07_0637 PF00882 Zinc dependent phospholipase C BCJMU07_0638 PF03372 Endonuclease/Exonuclease/phosphatase family BCJMU07_0643 PF02673 Bacitracin resistance protein BacA BCJMU07_0644 PF02743 Cache domain BCJMU07_0644 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BCJMU07_0644 PF00672 HAMP domain BCJMU07_0645 PF06725 3D domain BCJMU07_0645 PF01476 LysM domain BCJMU07_0646 PF01381 Helix-turn-helix BCJMU07_0648 PF04203 Sortase domain BCJMU07_0649 PF00854 POT family BCJMU07_0650 PF05525 Branched-chain amino acid transport protein BCJMU07_0653 PF00324 Amino acid permease BCJMU07_0654 PF00860 Permease family BCJMU07_0657 PF13673 Acetyltransferase (GNAT) domain BCJMU07_0659 PF00999 Sodium/hydrogen exchanger family BCJMU07_0659 PF02080 TrkA-C domain BCJMU07_0659 PF02254 TrkA-N domain BCJMU07_0661 PF00510 Cytochrome c oxidase subunit III BCJMU07_0662 PF00115 Cytochrome C and Quinol oxidase polypeptide I BCJMU07_0663 PF02790 Cytochrome C oxidase subunit II, transmembrane domain BCJMU07_0664 PF13529 Peptidase_C39 like family BCJMU07_0665 PF01546 Peptidase family M20/M25/M40 BCJMU07_0665 PF07687 Peptidase dimerisation domain BCJMU07_0666 PF11755 Protein of unknown function (DUF3311) BCJMU07_0667 PF00474 Sodium:solute symporter family BCJMU07_0668 PF03323 Bacillus/Clostridium GerA spore germination protein BCJMU07_0669 PF03845 Spore germination protein BCJMU07_0670 PF05504 Spore germination B3/ GerAC like, C-terminal BCJMU07_0672 PF07664 Ferrous iron transport protein B C terminus BCJMU07_0672 PF17910 FeoB cytosolic helical domain BCJMU07_0672 PF02421 Ferrous iron transport protein B BCJMU07_0672 PF07670 Nucleoside recognition BCJMU07_0673 PF07664 Ferrous iron transport protein B C terminus BCJMU07_0673 PF17910 FeoB cytosolic helical domain BCJMU07_0673 PF02421 Ferrous iron transport protein B BCJMU07_0673 PF07670 Nucleoside recognition BCJMU07_0674 PF07670 Nucleoside recognition BCJMU07_0674 PF02421 Ferrous iron transport protein B BCJMU07_0674 PF04023 FeoA domain BCJMU07_0674 PF07664 Ferrous iron transport protein B C terminus BCJMU07_0674 PF17910 FeoB cytosolic helical domain BCJMU07_0675 PF12849 PBP superfamily domain BCJMU07_0676 PF00528 Binding-protein-dependent transport system inner membrane component BCJMU07_0677 PF00528 Binding-protein-dependent transport system inner membrane component BCJMU07_0679 PF00873 AcrB/AcrD/AcrF family BCJMU07_0680 PF00571 CBS domain BCJMU07_0683 PF00246 Zinc carboxypeptidase BCJMU07_0683 PF08239 Bacterial SH3 domain BCJMU07_0684 PF03070 TENA/THI-4/PQQC family BCJMU07_0685 PF00005 ABC transporter BCJMU07_0686 PF00528 Binding-protein-dependent transport system inner membrane component BCJMU07_0687 PF09084 NMT1/THI5 like BCJMU07_0688 PF02581 Thiamine monophosphate synthase BCJMU07_0689 PF01266 FAD dependent oxidoreductase BCJMU07_0690 PF02597 ThiS family BCJMU07_0691 PF05690 Thiazole biosynthesis protein ThiG BCJMU07_0692 PF00899 ThiF family BCJMU07_0693 PF08543 Phosphomethylpyrimidine kinase BCJMU07_0697 PF03814 Potassium-transporting ATPase A subunit BCJMU07_0699 PF02669 K+-transporting ATPase, c chain BCJMU07_0700 PF02702 Osmosensitive K+ channel His kinase sensor domain BCJMU07_0701 PF07690 Major Facilitator Superfamily BCJMU07_0702 PF01047 MarR family BCJMU07_0707 PF12704 MacB-like periplasmic core domain BCJMU07_0707 PF02687 FtsX-like permease family BCJMU07_0707 PF00005 ABC transporter BCJMU07_0709 PF00860 Permease family BCJMU07_0711 PF17969 L,D-transpeptidase C-terminal domain BCJMU07_0711 PF03734 L,D-transpeptidase catalytic domain BCJMU07_0713 PF00085 Thioredoxin BCJMU07_0714 PF02600 Disulfide bond formation protein DsbB BCJMU07_0715 PF14148 YhdB-like protein BCJMU07_0717 PF03845 Spore germination protein BCJMU07_0719 PF03323 Bacillus/Clostridium GerA spore germination protein BCJMU07_0721 PF00881 Nitroreductase family BCJMU07_0722 PF04293 SpoVR like protein BCJMU07_0723 PF07728 AAA domain (dynein-related subfamily) BCJMU07_0723 PF12102 Domain of unknown function (DUF3578) BCJMU07_0725 PF07992 Pyridine nucleotide-disulphide oxidoreductase BCJMU07_0725 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BCJMU07_0726 PF02583 Metal-sensitive transcriptional repressor BCJMU07_0727 PF00581 Rhodanese-like domain BCJMU07_0727 PF01206 Sulfurtransferase TusA BCJMU07_0728 PF00753 Metallo-beta-lactamase superfamily BCJMU07_0728 PF00581 Rhodanese-like domain BCJMU07_0729 PF01206 Sulfurtransferase TusA BCJMU07_0730 PF00581 Rhodanese-like domain BCJMU07_0732 PF13686 DsrE/DsrF/DrsH-like family BCJMU07_0733 PF01925 Sulfite exporter TauE/SafE BCJMU07_0735 PF03816 Cell envelope-related transcriptional attenuator domain BCJMU07_0736 PF08240 Alcohol dehydrogenase GroES-like domain BCJMU07_0736 PF00107 Zinc-binding dehydrogenase BCJMU07_0737 PF02690 Na+/Pi-cotransporter BCJMU07_0738 PF07690 Major Facilitator Superfamily BCJMU07_0740 PF08279 HTH domain BCJMU07_0740 PF05043 Mga helix-turn-helix domain BCJMU07_0740 PF00874 PRD domain BCJMU07_0740 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BCJMU07_0741 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit BCJMU07_0742 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BCJMU07_0743 PF02378 Phosphotransferase system, EIIC BCJMU07_0746 PF01476 LysM domain BCJMU07_0746 PF06725 3D domain BCJMU07_0747 PF12704 MacB-like periplasmic core domain BCJMU07_0747 PF02687 FtsX-like permease family BCJMU07_0748 PF00005 ABC transporter BCJMU07_0750 PF09529 Integral membrane protein (intg_mem_TP0381) BCJMU07_0753 PF02687 FtsX-like permease family BCJMU07_0754 PF05525 Branched-chain amino acid transport protein BCJMU07_0755 PF05067 Manganese containing catalase BCJMU07_0756 PF12652 CotJB protein BCJMU07_0757 PF11007 Spore coat associated protein JA (CotJA) BCJMU07_0760 PF02735 Ku70/Ku80 beta-barrel domain BCJMU07_0762 PF09335 SNARE associated Golgi protein BCJMU07_0769 PF13520 Amino acid permease BCJMU07_0770 PF00999 Sodium/hydrogen exchanger family BCJMU07_0772 PF01418 Helix-turn-helix domain, rpiR family BCJMU07_0772 PF01380 SIS domain BCJMU07_0773 PF13580 SIS domain BCJMU07_0774 PF00367 phosphotransferase system, EIIB BCJMU07_0774 PF02378 Phosphotransferase system, EIIC BCJMU07_0777 PF07681 DoxX BCJMU07_0780 PF00892 EamA-like transporter family BCJMU07_0781 PF01037 Lrp/AsnC ligand binding domain BCJMU07_0783 PF00893 Small Multidrug Resistance protein BCJMU07_0784 PF00893 Small Multidrug Resistance protein BCJMU07_0785 PF17934 Tetracyclin repressor-like, C-terminal domain BCJMU07_0785 PF00440 Bacterial regulatory proteins, tetR family BCJMU07_0786 PF07690 Major Facilitator Superfamily BCJMU07_0787 PF00665 Integrase core domain BCJMU07_0787 PF13276 HTH-like domain BCJMU07_0787 PF13333 Integrase core domain BCJMU07_0789 PF12793 Sugar transport-related sRNA regulator N-term BCJMU07_0789 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BCJMU07_0790 PF07690 Major Facilitator Superfamily BCJMU07_0792 PF01965 DJ-1/PfpI family BCJMU07_0793 PF00199 Catalase BCJMU07_0793 PF06628 Catalase-related immune-responsive BCJMU07_0793 PF18011 C-terminal domain found in long catalases BCJMU07_0795 PF13520 Amino acid permease BCJMU07_0796 PF01177 Asp/Glu/Hydantoin racemase BCJMU07_0798 PF00171 Aldehyde dehydrogenase family BCJMU07_0799 PF00664 ABC transporter transmembrane region BCJMU07_0799 PF00005 ABC transporter BCJMU07_0800 PF00664 ABC transporter transmembrane region BCJMU07_0800 PF00005 ABC transporter BCJMU07_0801 PF00497 Bacterial extracellular solute-binding proteins, family 3 BCJMU07_0802 PF00528 Binding-protein-dependent transport system inner membrane component BCJMU07_0803 PF00005 ABC transporter BCJMU07_0804 PF00269 Small, acid-soluble spore proteins, alpha/beta type BCJMU07_0806 PF14398 YheC/D like ATP-grasp BCJMU07_0808 PF04286 Protein of unknown function (DUF445) BCJMU07_0809 PF06133 Control of competence regulator ComK, YlbF/YmcA BCJMU07_0812 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BCJMU07_0812 PF00205 Thiamine pyrophosphate enzyme, central domain BCJMU07_0812 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BCJMU07_0813 PF03306 Alpha-acetolactate decarboxylase BCJMU07_0815 PF02245 Methylpurine-DNA glycosylase (MPG) BCJMU07_0817 PF01510 N-acetylmuramoyl-L-alanine amidase BCJMU07_0817 PF01471 Putative peptidoglycan binding domain BCJMU07_0818 PF04055 Radical SAM superfamily BCJMU07_0819 PF00501 AMP-binding enzyme BCJMU07_0819 PF13193 AMP-binding enzyme C-terminal domain BCJMU07_0821 PF01740 STAS domain BCJMU07_0821 PF00916 Sulfate permease family BCJMU07_0826 PF07517 SecA DEAD-like domain BCJMU07_0826 PF01043 SecA preprotein cross-linking domain BCJMU07_0826 PF07516 SecA Wing and Scaffold domain BCJMU07_0827 PF01943 Polysaccharide biosynthesis protein BCJMU07_0827 PF14667 Polysaccharide biosynthesis C-terminal domain BCJMU07_0829 PF02368 Bacterial Ig-like domain (group 2) BCJMU07_0829 PF13205 Bacterial Ig-like domain BCJMU07_0829 PF00395 S-layer homology domain BCJMU07_0830 PF00395 S-layer homology domain BCJMU07_0832 PF03062 MBOAT, membrane-bound O-acyltransferase family BCJMU07_0834 PF00378 Enoyl-CoA hydratase/isomerase BCJMU07_0838 PF05343 M42 glutamyl aminopeptidase BCJMU07_0839 PF01520 N-acetylmuramoyl-L-alanine amidase BCJMU07_0839 PF00395 S-layer homology domain BCJMU07_0841 PF11121 Protein of unknown function (DUF2639) BCJMU07_0842 PF05544 Proline racemase BCJMU07_0843 PF02423 Ornithine cyclodeaminase/mu-crystallin family BCJMU07_0844 PF13333 Integrase core domain BCJMU07_0844 PF00665 Integrase core domain BCJMU07_0844 PF13276 HTH-like domain BCJMU07_0845 PF13333 Integrase core domain BCJMU07_0845 PF00665 Integrase core domain BCJMU07_0845 PF13276 HTH-like domain BCJMU07_0847 PF00004 ATPase family associated with various cellular activities (AAA) BCJMU07_0847 PF17866 AAA lid domain BCJMU07_0851 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BCJMU07_0852 PF00528 Binding-protein-dependent transport system inner membrane component BCJMU07_0853 PF00528 Binding-protein-dependent transport system inner membrane component BCJMU07_0853 PF12911 N-terminal TM domain of oligopeptide transport permease C BCJMU07_0854 PF00005 ABC transporter BCJMU07_0854 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BCJMU07_0855 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BCJMU07_0855 PF00005 ABC transporter BCJMU07_0859 PF00083 Sugar (and other) transporter BCJMU07_0860 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain BCJMU07_0860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCJMU07_0861 PF00072 Response regulator receiver domain BCJMU07_0861 PF08279 HTH domain BCJMU07_0861 PF12431 Transcriptional regulator BCJMU07_0862 PF03401 Tripartite tricarboxylate transporter family receptor BCJMU07_0868 PF07690 Major Facilitator Superfamily BCJMU07_0876 PF07993 Male sterility protein BCJMU07_0876 PF00550 Phosphopantetheine attachment site BCJMU07_0877 PF18665 Tetracyclin repressor-like, C-terminal domain BCJMU07_0877 PF00440 Bacterial regulatory proteins, tetR family BCJMU07_0880 PF01066 CDP-alcohol phosphatidyltransferase BCJMU07_0886 PF02733 Dak1 domain BCJMU07_0888 PF02733 Dak1 domain BCJMU07_0889 PF02525 Flavodoxin-like fold BCJMU07_0890 PF02082 Transcriptional regulator BCJMU07_0891 PF02734 DAK2 domain BCJMU07_0893 PF18801 response regulator aspartate phosphatase H, N terminal BCJMU07_0896 PF01966 HD domain BCJMU07_0896 PF00672 HAMP domain BCJMU07_0901 PF00395 S-layer homology domain BCJMU07_0906 PF11181 Heat induced stress protein YflT BCJMU07_0907 PF05532 CsbD-like BCJMU07_0910 PF01740 STAS domain BCJMU07_0911 PF13581 Histidine kinase-like ATPase domain BCJMU07_0912 PF04539 Sigma-70 region 3 BCJMU07_0912 PF04545 Sigma-70, region 4 BCJMU07_0912 PF04542 Sigma-70 region 2 BCJMU07_0914 PF13426 PAS domain BCJMU07_0914 PF07228 Stage II sporulation protein E (SpoIIE) BCJMU07_0915 PF01739 CheR methyltransferase, SAM binding domain BCJMU07_0915 PF03705 CheR methyltransferase, all-alpha domain BCJMU07_0916 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCJMU07_0916 PF00512 His Kinase A (phospho-acceptor) domain BCJMU07_0916 PF01627 Hpt domain BCJMU07_0916 PF00072 Response regulator receiver domain BCJMU07_0921 PF01906 Putative heavy-metal-binding BCJMU07_0923 PF00107 Zinc-binding dehydrogenase BCJMU07_0923 PF08240 Alcohol dehydrogenase GroES-like domain BCJMU07_0924 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCJMU07_0924 PF07730 Histidine kinase BCJMU07_0925 PF00196 Bacterial regulatory proteins, luxR family BCJMU07_0925 PF00072 Response regulator receiver domain BCJMU07_0927 PF11121 Protein of unknown function (DUF2639) BCJMU07_0930 PF00149 Calcineurin-like phosphoesterase BCJMU07_0931 PF13514 AAA domain BCJMU07_0932 PF01966 HD domain BCJMU07_0932 PF01336 OB-fold nucleic acid binding domain BCJMU07_0937 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BCJMU07_0938 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BCJMU07_0939 PF18801 response regulator aspartate phosphatase H, N terminal BCJMU07_0941 PF00561 alpha/beta hydrolase fold BCJMU07_0941 PF08386 TAP-like protein BCJMU07_0945 PF04309 Glycerol-3-phosphate responsive antiterminator BCJMU07_0946 PF00230 Major intrinsic protein BCJMU07_0947 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BCJMU07_0947 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BCJMU07_0948 PF01266 FAD dependent oxidoreductase BCJMU07_0948 PF16901 C-terminal domain of alpha-glycerophosphate oxidase BCJMU07_0950 PF00665 Integrase core domain BCJMU07_0950 PF13333 Integrase core domain BCJMU07_0950 PF13276 HTH-like domain BCJMU07_0955 PF04542 Sigma-70 region 2 BCJMU07_0955 PF08281 Sigma-70, region 4 BCJMU07_0960 PF07690 Major Facilitator Superfamily BCJMU07_0961 PF07690 Major Facilitator Superfamily BCJMU07_0963 PF03358 NADPH-dependent FMN reductase BCJMU07_0964 PF00857 Isochorismatase family BCJMU07_0965 PF13538 UvrD-like helicase C-terminal domain BCJMU07_0969 PF01047 MarR family BCJMU07_0970 PF12732 YtxH-like protein BCJMU07_0971 PF01230 HIT domain BCJMU07_0972 PF00005 ABC transporter BCJMU07_0973 PF05975 Bacterial ABC transporter protein EcsB BCJMU07_0974 PF12787 EcsC protein family BCJMU07_0976 PF00440 Bacterial regulatory proteins, tetR family BCJMU07_0976 PF17934 Tetracyclin repressor-like, C-terminal domain BCJMU07_0978 PF03703 Bacterial PH domain BCJMU07_0979 PF03703 Bacterial PH domain BCJMU07_0983 PF00440 Bacterial regulatory proteins, tetR family BCJMU07_0985 PF00665 Integrase core domain BCJMU07_0985 PF13276 HTH-like domain BCJMU07_0985 PF13333 Integrase core domain BCJMU07_0989 PF03703 Bacterial PH domain BCJMU07_0990 PF03703 Bacterial PH domain BCJMU07_0991 PF03992 Antibiotic biosynthesis monooxygenase BCJMU07_0992 PF00912 Transglycosylase BCJMU07_0992 PF00905 Penicillin binding protein transpeptidase domain BCJMU07_0993 PF01208 Uroporphyrinogen decarboxylase (URO-D) BCJMU07_0994 PF00762 Ferrochelatase BCJMU07_0995 PF01593 Flavin containing amine oxidoreductase BCJMU07_1001 PF03965 Penicillinase repressor BCJMU07_1004 PF00440 Bacterial regulatory proteins, tetR family BCJMU07_1004 PF17932 Tetracyclin repressor-like, C-terminal domain BCJMU07_1010 PF00356 Bacterial regulatory proteins, lacI family BCJMU07_1011 PF14149 YhfH-like protein BCJMU07_1012 PF12706 Beta-lactamase superfamily domain BCJMU07_1013 PF10437 Bacterial lipoate protein ligase C-terminus BCJMU07_1013 PF03099 Biotin/lipoate A/B protein ligase family BCJMU07_1015 PF00501 AMP-binding enzyme BCJMU07_1015 PF13193 AMP-binding enzyme C-terminal domain BCJMU07_1017 PF01520 N-acetylmuramoyl-L-alanine amidase BCJMU07_1017 PF00395 S-layer homology domain BCJMU07_1019 PF05593 RHS Repeat BCJMU07_1027 PF12146 Serine aminopeptidase, S33 BCJMU07_1028 PF00149 Calcineurin-like phosphoesterase BCJMU07_1030 PF01966 HD domain BCJMU07_1032 PF08281 Sigma-70, region 4 BCJMU07_1032 PF04542 Sigma-70 region 2 BCJMU07_1033 PF06445 GyrI-like small molecule binding domain BCJMU07_1033 PF12833 Helix-turn-helix domain BCJMU07_1034 PF00512 His Kinase A (phospho-acceptor) domain BCJMU07_1034 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCJMU07_1035 PF00486 Transcriptional regulatory protein, C terminal BCJMU07_1035 PF00072 Response regulator receiver domain BCJMU07_1040 PF01435 Peptidase family M48 BCJMU07_1040 PF16491 CAAX prenyl protease N-terminal, five membrane helices BCJMU07_1041 PF00892 EamA-like transporter family BCJMU07_1042 PF03424 Carbohydrate binding domain (family 17/28) BCJMU07_1042 PF00150 Cellulase (glycosyl hydrolase family 5) BCJMU07_1042 PF00395 S-layer homology domain BCJMU07_1044 PF00395 S-layer homology domain BCJMU07_1045 PF01274 Malate synthase BCJMU07_1046 PF00463 Isocitrate lyase family BCJMU07_1048 PF00313 'Cold-shock' DNA-binding domain BCJMU07_1052 PF09335 SNARE associated Golgi protein BCJMU07_1053 PF10502 Signal peptidase, peptidase S26 BCJMU07_1054 PF12705 PD-(D/E)XK nuclease superfamily BCJMU07_1054 PF13361 UvrD-like helicase C-terminal domain BCJMU07_1055 PF12705 PD-(D/E)XK nuclease superfamily BCJMU07_1055 PF00580 UvrD/REP helicase N-terminal domain BCJMU07_1055 PF13361 UvrD-like helicase C-terminal domain BCJMU07_1057 PF10676 Spore germination protein gerPA/gerPF BCJMU07_1058 PF10970 Spore germination protein GerPE BCJMU07_1060 PF10737 Spore germination protein GerPC BCJMU07_1061 PF10803 Spore germination GerPB BCJMU07_1062 PF10676 Spore germination protein gerPA/gerPF BCJMU07_1063 PF09388 Spo0E like sporulation regulatory protein BCJMU07_1064 PF01557 Fumarylacetoacetate (FAA) hydrolase family BCJMU07_1066 PF00202 Aminotransferase class-III BCJMU07_1067 PF07457 Protein of unknown function (DUF1516) BCJMU07_1069 PF00733 Asparagine synthase BCJMU07_1069 PF13537 Glutamine amidotransferase domain BCJMU07_1070 PF00762 Ferrochelatase BCJMU07_1071 PF00199 Catalase BCJMU07_1071 PF06628 Catalase-related immune-responsive BCJMU07_1072 PF00909 Ammonium Transporter Family BCJMU07_1074 PF00128 Alpha amylase, catalytic domain BCJMU07_1077 PF04461 Protein of unknown function (DUF520) BCJMU07_1078 PF17783 CvfB-like winged helix domain BCJMU07_1078 PF13509 S1 domain BCJMU07_1080 PF00639 PPIC-type PPIASE domain BCJMU07_1082 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BCJMU07_1082 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BCJMU07_1083 PF12758 Protein of unknown function (DUF3813) BCJMU07_1086 PF14168 YjzC-like protein BCJMU07_1087 PF10431 C-terminal, D2-small domain, of ClpB protein BCJMU07_1087 PF02861 Clp amino terminal domain, pathogenicity island component BCJMU07_1087 PF17871 AAA lid domain BCJMU07_1087 PF07724 AAA domain (Cdc48 subfamily) BCJMU07_1087 PF00004 ATPase family associated with various cellular activities (AAA) BCJMU07_1091 PF10815 ComZ BCJMU07_1092 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BCJMU07_1092 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BCJMU07_1093 PF00109 Beta-ketoacyl synthase, N-terminal domain BCJMU07_1093 PF02801 Beta-ketoacyl synthase, C-terminal domain BCJMU07_1094 PF10026 Predicted Zn-dependent protease (DUF2268) BCJMU07_1095 PF12227 Protein of unknown function (DUF3603) BCJMU07_1096 PF00579 tRNA synthetases class I (W and Y) BCJMU07_1097 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BCJMU07_1098 PF00528 Binding-protein-dependent transport system inner membrane component BCJMU07_1099 PF12911 N-terminal TM domain of oligopeptide transport permease C BCJMU07_1099 PF00528 Binding-protein-dependent transport system inner membrane component BCJMU07_1100 PF00005 ABC transporter BCJMU07_1100 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BCJMU07_1101 PF00005 ABC transporter BCJMU07_1101 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BCJMU07_1102 PF01554 MatE BCJMU07_1103 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BCJMU07_1106 PF03960 ArsC family BCJMU07_1107 PF03741 Integral membrane protein TerC family BCJMU07_1108 PF05389 Negative regulator of genetic competence (MecA) BCJMU07_1109 PF13091 PLD-like domain BCJMU07_1109 PF13396 Phospholipase_D-nuclease N-terminal BCJMU07_1111 PF08439 Oligopeptidase F BCJMU07_1111 PF01432 Peptidase family M3 BCJMU07_1114 PF01152 Bacterial-like globin BCJMU07_1115 PF01928 CYTH domain BCJMU07_1117 PF04607 Region found in RelA / SpoT proteins BCJMU07_1118 PF01513 ATP-NAD kinase BCJMU07_1119 PF00849 RNA pseudouridylate synthase BCJMU07_1121 PF00149 Calcineurin-like phosphoesterase BCJMU07_1122 PF01098 Cell cycle protein BCJMU07_1123 PF00535 Glycosyl transferase family 2 BCJMU07_1124 PF08241 Methyltransferase domain BCJMU07_1125 PF05711 Macrocin-O-methyltransferase (TylF) BCJMU07_1127 PF13181 Tetratricopeptide repeat BCJMU07_1127 PF00535 Glycosyl transferase family 2 BCJMU07_1131 PF00483 Nucleotidyl transferase BCJMU07_1132 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase BCJMU07_1133 PF16363 GDP-mannose 4,6 dehydratase BCJMU07_1134 PF04321 RmlD substrate binding domain BCJMU07_1138 PF07098 Protein of unknown function (DUF1360) BCJMU07_1142 PF00580 UvrD/REP helicase N-terminal domain BCJMU07_1142 PF13361 UvrD-like helicase C-terminal domain BCJMU07_1143 PF13673 Acetyltransferase (GNAT) domain BCJMU07_1145 PF00756 Putative esterase BCJMU07_1146 PF01609 Transposase DDE domain BCJMU07_1149 PF02368 Bacterial Ig-like domain (group 2) BCJMU07_1150 PF00474 Sodium:solute symporter family BCJMU07_1152 PF04715 Anthranilate synthase component I, N terminal region BCJMU07_1152 PF00425 chorismate binding enzyme BCJMU07_1153 PF00591 Glycosyl transferase family, a/b domain BCJMU07_1153 PF00117 Glutamine amidotransferase class-I BCJMU07_1153 PF02885 Glycosyl transferase family, helical bundle domain BCJMU07_1154 PF02885 Glycosyl transferase family, helical bundle domain BCJMU07_1154 PF00591 Glycosyl transferase family, a/b domain BCJMU07_1155 PF00218 Indole-3-glycerol phosphate synthase BCJMU07_1156 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase BCJMU07_1157 PF00291 Pyridoxal-phosphate dependent enzyme BCJMU07_1158 PF00290 Tryptophan synthase alpha chain BCJMU07_1160 PF02652 L-lactate permease BCJMU07_1161 PF10042 Uncharacterized conserved protein (DUF2278) BCJMU07_1165 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BCJMU07_1165 PF07992 Pyridine nucleotide-disulphide oxidoreductase BCJMU07_1170 PF02817 e3 binding domain BCJMU07_1170 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BCJMU07_1170 PF00364 Biotin-requiring enzyme BCJMU07_1171 PF00676 Dehydrogenase E1 component BCJMU07_1171 PF16870 2-oxoglutarate dehydrogenase C-terminal BCJMU07_1171 PF02779 Transketolase, pyrimidine binding domain BCJMU07_1172 PF01381 Helix-turn-helix BCJMU07_1185 PF13175 AAA ATPase domain BCJMU07_1190 PF13649 Methyltransferase domain BCJMU07_1192 PF07943 Penicillin-binding protein 5, C-terminal domain BCJMU07_1192 PF00768 D-alanyl-D-alanine carboxypeptidase BCJMU07_1194 PF12389 Camelysin metallo-endopeptidase BCJMU07_1196 PF12389 Camelysin metallo-endopeptidase BCJMU07_1197 PF01381 Helix-turn-helix BCJMU07_1197 PF08671 Anti-repressor SinI BCJMU07_1199 PF05547 Immune inhibitor A peptidase M6 BCJMU07_1200 PF00171 Aldehyde dehydrogenase family BCJMU07_1201 PF08402 TOBE domain BCJMU07_1201 PF00005 ABC transporter BCJMU07_1202 PF00528 Binding-protein-dependent transport system inner membrane component BCJMU07_1203 PF00528 Binding-protein-dependent transport system inner membrane component BCJMU07_1204 PF13416 Bacterial extracellular solute-binding protein BCJMU07_1206 PF03176 MMPL family BCJMU07_1208 PF01479 S4 domain BCJMU07_1208 PF00849 RNA pseudouridylate synthase BCJMU07_1210 PF00188 Cysteine-rich secretory protein family BCJMU07_1211 PF02754 Cysteine-rich domain BCJMU07_1211 PF13183 4Fe-4S dicluster domain BCJMU07_1212 PF02913 FAD linked oxidases, C-terminal domain BCJMU07_1212 PF01565 FAD binding domain BCJMU07_1213 PF05651 Putative sugar diacid recognition BCJMU07_1213 PF17853 GGDEF-like domain BCJMU07_1213 PF13556 PucR C-terminal helix-turn-helix domain BCJMU07_1215 PF00072 Response regulator receiver domain BCJMU07_1215 PF00486 Transcriptional regulatory protein, C terminal BCJMU07_1216 PF00512 His Kinase A (phospho-acceptor) domain BCJMU07_1216 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCJMU07_1216 PF00672 HAMP domain BCJMU07_1216 PF00989 PAS fold BCJMU07_1216 PF18698 Histidine kinase sensor domain BCJMU07_1217 PF00392 Bacterial regulatory proteins, gntR family BCJMU07_1217 PF07729 FCD domain BCJMU07_1218 PF02754 Cysteine-rich domain BCJMU07_1219 PF11870 Domain of unknown function (DUF3390) BCJMU07_1219 PF13183 4Fe-4S dicluster domain BCJMU07_1219 PF02589 LUD domain BCJMU07_1220 PF02589 LUD domain BCJMU07_1221 PF01478 Type IV leader peptidase family BCJMU07_1221 PF06750 Bacterial Peptidase A24 N-terminal domain BCJMU07_1223 PF01226 Formate/nitrite transporter BCJMU07_1224 PF03741 Integral membrane protein TerC family BCJMU07_1225 PF02386 Cation transport protein BCJMU07_1226 PF00269 Small, acid-soluble spore proteins, alpha/beta type BCJMU07_1227 PF01575 MaoC like domain BCJMU07_1232 PF00561 alpha/beta hydrolase fold BCJMU07_1233 PF01266 FAD dependent oxidoreductase BCJMU07_1234 PF02386 Cation transport protein BCJMU07_1238 PF08402 TOBE domain BCJMU07_1238 PF00005 ABC transporter BCJMU07_1239 PF00528 Binding-protein-dependent transport system inner membrane component BCJMU07_1240 PF13419 Haloacid dehalogenase-like hydrolase BCJMU07_1241 PF00266 Aminotransferase class-V BCJMU07_1243 PF00455 DeoR C terminal sensor domain BCJMU07_1243 PF08220 DeoR-like helix-turn-helix domain BCJMU07_1246 PF01520 N-acetylmuramoyl-L-alanine amidase BCJMU07_1246 PF00395 S-layer homology domain BCJMU07_1247 PF00596 Class II Aldolase and Adducin N-terminal domain BCJMU07_1249 PF04748 Divergent polysaccharide deacetylase BCJMU07_1250 PF09388 Spo0E like sporulation regulatory protein BCJMU07_1251 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCJMU07_1251 PF00512 His Kinase A (phospho-acceptor) domain BCJMU07_1251 PF02743 Cache domain BCJMU07_1252 PF01047 MarR family BCJMU07_1254 PF12867 DinB superfamily BCJMU07_1255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCJMU07_1255 PF00512 His Kinase A (phospho-acceptor) domain BCJMU07_1255 PF00989 PAS fold BCJMU07_1255 PF13426 PAS domain BCJMU07_1255 PF13188 PAS domain BCJMU07_1256 PF06508 Queuosine biosynthesis protein QueC BCJMU07_1257 PF01242 6-pyruvoyl tetrahydropterin synthase BCJMU07_1258 PF04055 Radical SAM superfamily BCJMU07_1259 PF14489 QueF-like protein BCJMU07_1260 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) BCJMU07_1267 PF07972 NrdI Flavodoxin like BCJMU07_1268 PF02867 Ribonucleotide reductase, barrel domain BCJMU07_1268 PF00317 Ribonucleotide reductase, all-alpha domain BCJMU07_1268 PF08343 Ribonucleotide reductase N-terminal BCJMU07_1269 PF01844 HNH endonuclease BCJMU07_1270 PF00317 Ribonucleotide reductase, all-alpha domain BCJMU07_1270 PF02867 Ribonucleotide reductase, barrel domain BCJMU07_1270 PF14528 LAGLIDADG-like domain BCJMU07_1270 PF08343 Ribonucleotide reductase N-terminal BCJMU07_1271 PF00268 Ribonucleotide reductase, small chain BCJMU07_1272 PF00392 Bacterial regulatory proteins, gntR family BCJMU07_1273 PF00005 ABC transporter BCJMU07_1276 PF00005 ABC transporter BCJMU07_1280 PF01037 Lrp/AsnC ligand binding domain BCJMU07_1282 PF00857 Isochorismatase family BCJMU07_1284 PF02016 LD-carboxypeptidase N-terminal domain BCJMU07_1284 PF17676 LD-carboxypeptidase C-terminal domain BCJMU07_1285 PF03060 Nitronate monooxygenase BCJMU07_1286 PF04914 DltD protein BCJMU07_1287 PF00550 Phosphopantetheine attachment site BCJMU07_1288 PF03062 MBOAT, membrane-bound O-acyltransferase family BCJMU07_1289 PF13193 AMP-binding enzyme C-terminal domain BCJMU07_1289 PF00501 AMP-binding enzyme BCJMU07_1291 PF01546 Peptidase family M20/M25/M40 BCJMU07_1291 PF07687 Peptidase dimerisation domain BCJMU07_1293 PF00258 Flavodoxin BCJMU07_1296 PF01636 Phosphotransferase enzyme family BCJMU07_1300 PF01554 MatE BCJMU07_1301 PF02673 Bacitracin resistance protein BacA BCJMU07_1304 PF01047 MarR family BCJMU07_1306 PF00375 Sodium:dicarboxylate symporter family BCJMU07_1307 PF02386 Cation transport protein BCJMU07_1309 PF09579 Sporulation protein YtfJ (Spore_YtfJ) BCJMU07_1310 PF03698 Uncharacterised protein family (UPF0180) BCJMU07_1313 PF01063 Amino-transferase class IV BCJMU07_1314 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BCJMU07_1314 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BCJMU07_1314 PF00205 Thiamine pyrophosphate enzyme, central domain BCJMU07_1315 PF01842 ACT domain BCJMU07_1315 PF10369 Small subunit of acetolactate synthase BCJMU07_1316 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain BCJMU07_1316 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain BCJMU07_1317 PF08502 LeuA allosteric (dimerisation) domain BCJMU07_1317 PF00682 HMGL-like BCJMU07_1318 PF00180 Isocitrate/isopropylmalate dehydrogenase BCJMU07_1319 PF00330 Aconitase family (aconitate hydratase) BCJMU07_1320 PF00694 Aconitase C-terminal domain BCJMU07_1321 PF13393 Histidyl-tRNA synthetase BCJMU07_1322 PF01634 ATP phosphoribosyltransferase BCJMU07_1323 PF00815 Histidinol dehydrogenase BCJMU07_1324 PF00475 Imidazoleglycerol-phosphate dehydratase BCJMU07_1325 PF00117 Glutamine amidotransferase class-I BCJMU07_1326 PF00977 Histidine biosynthesis protein BCJMU07_1327 PF00977 Histidine biosynthesis protein BCJMU07_1328 PF01502 Phosphoribosyl-AMP cyclohydrolase BCJMU07_1329 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase BCJMU07_1330 PF02811 PHP domain BCJMU07_1332 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BCJMU07_1332 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BCJMU07_1333 PF01066 CDP-alcohol phosphatidyltransferase BCJMU07_1334 PF00884 Sulfatase BCJMU07_1336 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BCJMU07_1336 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain BCJMU07_1338 PF01507 Phosphoadenosine phosphosulfate reductase family BCJMU07_1339 PF14306 PUA-like domain BCJMU07_1339 PF01747 ATP-sulfurylase BCJMU07_1341 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BCJMU07_1341 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BCJMU07_1343 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BCJMU07_1344 PF01903 CbiX BCJMU07_1346 PF00209 Sodium:neurotransmitter symporter family BCJMU07_1348 PF00375 Sodium:dicarboxylate symporter family BCJMU07_1350 PF03553 Na+/H+ antiporter family BCJMU07_1353 PF09922 Cell wall-active antibiotics response 4TMS YvqF BCJMU07_1354 PF00672 HAMP domain BCJMU07_1354 PF07730 Histidine kinase BCJMU07_1354 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCJMU07_1355 PF00196 Bacterial regulatory proteins, luxR family BCJMU07_1355 PF00072 Response regulator receiver domain BCJMU07_1357 PF05525 Branched-chain amino acid transport protein BCJMU07_1359 PF08241 Methyltransferase domain BCJMU07_1365 PF00175 Oxidoreductase NAD-binding domain BCJMU07_1365 PF00042 Globin BCJMU07_1365 PF00970 Oxidoreductase FAD-binding domain BCJMU07_1368 PF01925 Sulfite exporter TauE/SafE BCJMU07_1369 PF01384 Phosphate transporter family BCJMU07_1370 PF01865 Protein of unknown function DUF47 BCJMU07_1371 PF00912 Transglycosylase BCJMU07_1371 PF00905 Penicillin binding protein transpeptidase domain BCJMU07_1376 PF00512 His Kinase A (phospho-acceptor) domain BCJMU07_1376 PF00989 PAS fold BCJMU07_1376 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCJMU07_1377 PF01904 Protein of unknown function DUF72 BCJMU07_1379 PF00589 Phage integrase family BCJMU07_1380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCJMU07_1380 PF00989 PAS fold BCJMU07_1380 PF16736 Single Cache-like BCJMU07_1380 PF00512 His Kinase A (phospho-acceptor) domain BCJMU07_1381 PF01048 Phosphorylase superfamily BCJMU07_1384 PF09924 Uncharacterised conserved protein (DUF2156) BCJMU07_1384 PF03706 Lysylphosphatidylglycerol synthase TM region BCJMU07_1386 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BCJMU07_1386 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BCJMU07_1387 PF00768 D-alanyl-D-alanine carboxypeptidase BCJMU07_1387 PF07943 Penicillin-binding protein 5, C-terminal domain BCJMU07_1388 PF07670 Nucleoside recognition BCJMU07_1389 PF07670 Nucleoside recognition BCJMU07_1390 PF01479 S4 domain BCJMU07_1390 PF00849 RNA pseudouridylate synthase BCJMU07_1391 PF00578 AhpC/TSA family BCJMU07_1392 PF05140 ResB-like family BCJMU07_1393 PF01578 Cytochrome C assembly protein BCJMU07_1394 PF00072 Response regulator receiver domain BCJMU07_1394 PF00486 Transcriptional regulatory protein, C terminal BCJMU07_1395 PF00512 His Kinase A (phospho-acceptor) domain BCJMU07_1395 PF00989 PAS fold BCJMU07_1395 PF00672 HAMP domain BCJMU07_1395 PF18698 Histidine kinase sensor domain BCJMU07_1395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCJMU07_1396 PF01923 Cobalamin adenosyltransferase BCJMU07_1397 PF01551 Peptidase family M23 BCJMU07_1399 PF12822 ECF transporter, substrate-specific component BCJMU07_1402 PF00271 Helicase conserved C-terminal domain BCJMU07_1402 PF00270 DEAD/DEAH box helicase BCJMU07_1403 PF02517 CPBP intramembrane metalloprotease BCJMU07_1405 PF00149 Calcineurin-like phosphoesterase BCJMU07_1406 PF02310 B12 binding domain BCJMU07_1406 PF02607 B12 binding domain BCJMU07_1406 PF13411 MerR HTH family regulatory protein BCJMU07_1407 PF05389 Negative regulator of genetic competence (MecA) BCJMU07_1408 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BCJMU07_1408 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BCJMU07_1413 PF00710 Asparaginase, N-terminal BCJMU07_1413 PF17763 Glutaminase/Asparaginase C-terminal domain BCJMU07_1415 PF02224 Cytidylate kinase BCJMU07_1416 PF00575 S1 RNA binding domain BCJMU07_1417 PF01070 FMN-dependent dehydrogenase BCJMU07_1418 PF14140 YpzI-like protein BCJMU07_1420 PF14045 YIEGIA protein BCJMU07_1422 PF01926 50S ribosome-binding GTPase BCJMU07_1422 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal BCJMU07_1423 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus BCJMU07_1423 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus BCJMU07_1425 PF10966 Protein of unknown function (DUF2768) BCJMU07_1427 PF09547 Stage IV sporulation protein A (spore_IV_A) BCJMU07_1428 PF00216 Bacterial DNA-binding protein BCJMU07_1429 PF01227 GTP cyclohydrolase I BCJMU07_1430 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 BCJMU07_1431 PF01209 ubiE/COQ5 methyltransferase family BCJMU07_1432 PF00348 Polyprenyl synthetase BCJMU07_1433 PF00334 Nucleoside diphosphate kinase BCJMU07_1434 PF01264 Chorismate synthase BCJMU07_1435 PF01761 3-dehydroquinate synthase BCJMU07_1436 PF00155 Aminotransferase class I and II BCJMU07_1438 PF08858 IDEAL domain BCJMU07_1438 PF08864 UPF0302 domain BCJMU07_1439 PF10673 Protein of unknown function (DUF2487) BCJMU07_1440 PF00355 Rieske [2Fe-2S] domain BCJMU07_1441 PF00033 Cytochrome b/b6/petB BCJMU07_1442 PF00032 Cytochrome b(C-terminal)/b6/petD BCJMU07_1442 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BCJMU07_1443 PF07187 Protein of unknown function (DUF1405) BCJMU07_1445 PF09577 Sporulation protein YpjB (SpoYpjB) BCJMU07_1446 PF04298 Putative neutral zinc metallopeptidase BCJMU07_1448 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BCJMU07_1448 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BCJMU07_1449 PF03819 MazG nucleotide pyrophosphohydrolase domain BCJMU07_1450 PF05173 Dihydrodipicolinate reductase, C-terminus BCJMU07_1450 PF01113 Dihydrodipicolinate reductase, N-terminus BCJMU07_1451 PF02142 MGS-like domain BCJMU07_1452 PF02585 GlcNAc-PI de-N-acetylase BCJMU07_1453 PF13439 Glycosyltransferase Family 4 BCJMU07_1453 PF00534 Glycosyl transferases group 1 BCJMU07_1454 PF01743 Poly A polymerase head domain BCJMU07_1454 PF12627 Probable RNA and SrmB- binding site of polymerase A BCJMU07_1454 PF13735 tRNA nucleotidyltransferase domain 2 putative BCJMU07_1455 PF02237 Biotin protein ligase C terminal domain BCJMU07_1455 PF03099 Biotin/lipoate A/B protein ligase family BCJMU07_1455 PF08279 HTH domain BCJMU07_1458 PF02548 Ketopantoate hydroxymethyltransferase BCJMU07_1459 PF02569 Pantoate-beta-alanine ligase BCJMU07_1460 PF02261 Aspartate decarboxylase BCJMU07_1461 PF04851 Type III restriction enzyme, res subunit BCJMU07_1461 PF13307 Helicase C-terminal domain BCJMU07_1461 PF00929 Exonuclease BCJMU07_1462 PF14084 Protein of unknown function (DUF4264) BCJMU07_1464 PF00155 Aminotransferase class I and II BCJMU07_1465 PF07261 Replication initiation and membrane attachment BCJMU07_1466 PF00730 HhH-GPD superfamily base excision DNA repair protein BCJMU07_1466 PF00633 Helix-hairpin-helix motif BCJMU07_1466 PF10576 Iron-sulfur binding domain of endonuclease III BCJMU07_1468 PF00905 Penicillin binding protein transpeptidase domain BCJMU07_1468 PF00912 Transglycosylase BCJMU07_1469 PF03838 Recombination protein U BCJMU07_1470 PF10720 Protein of unknown function (DUF2515) BCJMU07_1477 PF06908 YspA SLOG family BCJMU07_1478 PF05103 DivIVA protein BCJMU07_1479 PF02926 THUMP domain BCJMU07_1479 PF01170 Putative RNA methylase family UPF0020 BCJMU07_1481 PF13307 Helicase C-terminal domain BCJMU07_1482 PF02074 Carboxypeptidase Taq (M32) metallopeptidase BCJMU07_1484 PF01636 Phosphotransferase enzyme family BCJMU07_1485 PF00557 Metallopeptidase family M24 BCJMU07_1486 PF00156 Phosphoribosyl transferase domain BCJMU07_1487 PF00860 Permease family BCJMU07_1488 PF04235 Protein of unknown function (DUF418) BCJMU07_1490 PF00350 Dynamin family BCJMU07_1492 PF00583 Acetyltransferase (GNAT) family BCJMU07_1493 PF10752 Protein of unknown function (DUF2533) BCJMU07_1494 PF00581 Rhodanese-like domain BCJMU07_1498 PF03738 Glutathionylspermidine synthase preATP-grasp BCJMU07_1500 PF00690 Cation transporter/ATPase, N-terminus BCJMU07_1500 PF00689 Cation transporting ATPase, C-terminus BCJMU07_1501 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BCJMU07_1501 PF01367 5'-3' exonuclease, C-terminal SAM fold BCJMU07_1504 PF13673 Acetyltransferase (GNAT) domain BCJMU07_1504 PF18014 Acetyltransferase (GNAT) domain BCJMU07_1508 PF13456 Reverse transcriptase-like BCJMU07_1509 PF01263 Aldose 1-epimerase BCJMU07_1514 PF00313 'Cold-shock' DNA-binding domain BCJMU07_1515 PF08892 YqcI/YcgG family BCJMU07_1516 PF01810 LysE type translocator BCJMU07_1519 PF04341 Protein of unknown function, DUF485 BCJMU07_1520 PF00474 Sodium:solute symporter family BCJMU07_1521 PF00202 Aminotransferase class-III BCJMU07_1523 PF00999 Sodium/hydrogen exchanger family BCJMU07_1524 PF00753 Metallo-beta-lactamase superfamily BCJMU07_1524 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain BCJMU07_1524 PF17770 Ribonuclease J C-terminal domain BCJMU07_1525 PF13411 MerR HTH family regulatory protein BCJMU07_1525 PF06445 GyrI-like small molecule binding domain BCJMU07_1527 PF04239 Protein of unknown function (DUF421) BCJMU07_1528 PF02698 DUF218 domain BCJMU07_1530 PF00881 Nitroreductase family BCJMU07_1539 PF17209 Hfq protein BCJMU07_1541 PF01618 MotA/TolQ/ExbB proton channel family BCJMU07_1542 PF00691 OmpA family BCJMU07_1542 PF13677 Membrane MotB of proton-channel complex MotA/MotB BCJMU07_1543 PF00072 Response regulator receiver domain BCJMU07_1544 PF01584 CheW-like domain BCJMU07_1544 PF02895 Signal transducing histidine kinase, homodimeric domain BCJMU07_1544 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCJMU07_1544 PF01627 Hpt domain BCJMU07_1544 PF07194 P2 response regulator binding domain BCJMU07_1545 PF04509 CheC-like family BCJMU07_1545 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BCJMU07_1548 PF01739 CheR methyltransferase, SAM binding domain BCJMU07_1548 PF03705 CheR methyltransferase, all-alpha domain BCJMU07_1552 PF00460 Flagella basal body rod protein BCJMU07_1552 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BCJMU07_1553 PF00669 Bacterial flagellin N-terminal helical region BCJMU07_1553 PF00700 Bacterial flagellin C-terminal helical region BCJMU07_1554 PF02465 Flagellar hook-associated protein 2 N-terminus BCJMU07_1554 PF07195 Flagellar hook-associated protein 2 C-terminus BCJMU07_1554 PF07196 Flagellin hook IN motif BCJMU07_1557 PF00460 Flagella basal body rod protein BCJMU07_1558 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BCJMU07_1558 PF00460 Flagella basal body rod protein BCJMU07_1559 PF02049 Flagellar hook-basal body complex protein FliE BCJMU07_1560 PF08345 Flagellar M-ring protein C-terminal BCJMU07_1560 PF01514 Secretory protein of YscJ/FliF family BCJMU07_1561 PF14842 FliG N-terminal domain BCJMU07_1561 PF14841 FliG middle domain BCJMU07_1561 PF01706 FliG C-terminal domain BCJMU07_1563 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BCJMU07_1563 PF02874 ATP synthase alpha/beta family, beta-barrel domain BCJMU07_1563 PF18269 T3SS EscN ATPase C-terminal domain BCJMU07_1567 PF00460 Flagella basal body rod protein BCJMU07_1567 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BCJMU07_1567 PF07559 Flagellar basal body protein FlaE BCJMU07_1570 PF00072 Response regulator receiver domain BCJMU07_1570 PF01584 CheW-like domain BCJMU07_1571 PF12181 DNA binding domain of the motility gene repressor (MogR) BCJMU07_1572 PF13276 HTH-like domain BCJMU07_1572 PF00665 Integrase core domain BCJMU07_1572 PF13333 Integrase core domain BCJMU07_1573 PF12323 Helix-turn-helix domain BCJMU07_1573 PF01385 Probable transposase BCJMU07_1573 PF07282 Putative transposase DNA-binding domain BCJMU07_1574 PF08884 Flagellin D3 domain BCJMU07_1574 PF00700 Bacterial flagellin C-terminal helical region BCJMU07_1574 PF00669 Bacterial flagellin N-terminal helical region BCJMU07_1575 PF01464 Transglycosylase SLT domain BCJMU07_1577 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BCJMU07_1577 PF02154 Flagellar motor switch protein FliM BCJMU07_1578 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BCJMU07_1578 PF04509 CheC-like family BCJMU07_1580 PF00813 FliP family BCJMU07_1581 PF01313 Bacterial export proteins, family 3 BCJMU07_1583 PF01312 FlhB HrpN YscU SpaS Family BCJMU07_1584 PF00771 FHIPEP family BCJMU07_1585 PF00448 SRP54-type protein, GTPase domain BCJMU07_1586 PF00460 Flagella basal body rod protein BCJMU07_1586 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BCJMU07_1587 PF02272 DHHA1 domain BCJMU07_1587 PF01411 tRNA synthetases class II (A) BCJMU07_1587 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BCJMU07_1592 PF17932 Tetracyclin repressor-like, C-terminal domain BCJMU07_1592 PF00440 Bacterial regulatory proteins, tetR family BCJMU07_1593 PF17329 Family of unknown function (DUF5367) BCJMU07_1598 PF03992 Antibiotic biosynthesis monooxygenase BCJMU07_1599 PF08141 Small acid-soluble spore protein H family BCJMU07_1603 PF03466 LysR substrate binding domain BCJMU07_1603 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BCJMU07_1604 PF08402 TOBE domain BCJMU07_1604 PF00005 ABC transporter BCJMU07_1606 PF00528 Binding-protein-dependent transport system inner membrane component BCJMU07_1607 PF00753 Metallo-beta-lactamase superfamily BCJMU07_1607 PF12706 Beta-lactamase superfamily domain BCJMU07_1609 PF10787 Uncharacterised protein from bacillus cereus group BCJMU07_1624 PF00300 Histidine phosphatase superfamily (branch 1) BCJMU07_1628 PF01047 MarR family BCJMU07_1630 PF13537 Glutamine amidotransferase domain BCJMU07_1630 PF00733 Asparagine synthase BCJMU07_1634 PF01545 Cation efflux family BCJMU07_1634 PF16916 Dimerisation domain of Zinc Transporter BCJMU07_1636 PF07729 FCD domain BCJMU07_1636 PF00392 Bacterial regulatory proteins, gntR family BCJMU07_1637 PF00892 EamA-like transporter family BCJMU07_1638 PF02492 CobW/HypB/UreG, nucleotide-binding domain BCJMU07_1638 PF07683 Cobalamin synthesis protein cobW C-terminal domain BCJMU07_1640 PF03773 Predicted permease BCJMU07_1643 PF03553 Na+/H+ antiporter family BCJMU07_1644 PF00206 Lyase BCJMU07_1644 PF10415 Fumarase C C-terminus BCJMU07_1649 PF01554 MatE BCJMU07_1650 PF03575 Peptidase family S51 BCJMU07_1654 PF02683 Cytochrome C biogenesis protein transmembrane region BCJMU07_1655 PF00578 AhpC/TSA family BCJMU07_1660 PF00291 Pyridoxal-phosphate dependent enzyme BCJMU07_1661 PF04286 Protein of unknown function (DUF445) BCJMU07_1666 PF00196 Bacterial regulatory proteins, luxR family BCJMU07_1666 PF00072 Response regulator receiver domain BCJMU07_1668 PF13492 GAF domain BCJMU07_1668 PF13185 GAF domain BCJMU07_1668 PF07730 Histidine kinase BCJMU07_1668 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCJMU07_1669 PF00005 ABC transporter BCJMU07_1672 PF13091 PLD-like domain BCJMU07_1673 PF00696 Amino acid kinase family BCJMU07_1674 PF00375 Sodium:dicarboxylate symporter family BCJMU07_1675 PF10415 Fumarase C C-terminus BCJMU07_1675 PF00206 Lyase BCJMU07_1676 PF00390 Malic enzyme, N-terminal domain BCJMU07_1676 PF03949 Malic enzyme, NAD binding domain BCJMU07_1677 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCJMU07_1678 PF08664 YcbB domain BCJMU07_1678 PF00072 Response regulator receiver domain BCJMU07_1679 PF04434 SWIM zinc finger BCJMU07_1679 PF00176 SNF2 family N-terminal domain BCJMU07_1679 PF00271 Helicase conserved C-terminal domain BCJMU07_1682 PF03590 Aspartate-ammonia ligase BCJMU07_1683 PF01381 Helix-turn-helix BCJMU07_1684 PF00696 Amino acid kinase family BCJMU07_1684 PF13840 ACT domain BCJMU07_1686 PF13761 Domain of unknown function (DUF4166) BCJMU07_1687 PF14158 YndJ-like protein BCJMU07_1688 PF00293 NUDIX domain BCJMU07_1689 PF00395 S-layer homology domain BCJMU07_1689 PF02368 Bacterial Ig-like domain (group 2) BCJMU07_1691 PF13302 Acetyltransferase (GNAT) domain BCJMU07_1696 PF02554 Carbon starvation protein CstA BCJMU07_1697 PF03976 Polyphosphate kinase 2 (PPK2) BCJMU07_1698 PF07690 Major Facilitator Superfamily BCJMU07_1699 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BCJMU07_1699 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BCJMU07_1701 PF13167 GTP-binding GTPase N-terminal BCJMU07_1701 PF16360 GTP-binding GTPase Middle Region BCJMU07_1701 PF01926 50S ribosome-binding GTPase BCJMU07_1702 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BCJMU07_1703 PF07690 Major Facilitator Superfamily BCJMU07_1704 PF00291 Pyridoxal-phosphate dependent enzyme BCJMU07_1707 PF14667 Polysaccharide biosynthesis C-terminal domain BCJMU07_1707 PF01943 Polysaccharide biosynthesis protein BCJMU07_1708 PF00209 Sodium:neurotransmitter symporter family BCJMU07_1709 PF01522 Polysaccharide deacetylase BCJMU07_1709 PF00457 Glycosyl hydrolases family 11 BCJMU07_1709 PF03422 Carbohydrate binding module (family 6) BCJMU07_1711 PF04239 Protein of unknown function (DUF421) BCJMU07_1714 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BCJMU07_1714 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BCJMU07_1717 PF01625 Peptide methionine sulfoxide reductase BCJMU07_1719 PF01063 Amino-transferase class IV BCJMU07_1720 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BCJMU07_1720 PF00205 Thiamine pyrophosphate enzyme, central domain BCJMU07_1720 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BCJMU07_1721 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BCJMU07_1721 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BCJMU07_1721 PF00205 Thiamine pyrophosphate enzyme, central domain BCJMU07_1723 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain BCJMU07_1723 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain BCJMU07_1724 PF00920 Dehydratase family BCJMU07_1725 PF00291 Pyridoxal-phosphate dependent enzyme BCJMU07_1725 PF00585 C-terminal regulatory domain of Threonine dehydratase BCJMU07_1727 PF09587 Bacterial capsule synthesis protein PGA_cap BCJMU07_1730 PF07690 Major Facilitator Superfamily BCJMU07_1732 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase BCJMU07_1735 PF00144 Beta-lactamase BCJMU07_1736 PF04397 LytTr DNA-binding domain BCJMU07_1736 PF00072 Response regulator receiver domain BCJMU07_1737 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain BCJMU07_1737 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain BCJMU07_1740 PF01979 Amidohydrolase family BCJMU07_1741 PF14436 Bacterial EndoU nuclease BCJMU07_1741 PF04740 LXG domain of WXG superfamily BCJMU07_1744 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BCJMU07_1749 PF13186 Iron-sulfur cluster-binding domain BCJMU07_1749 PF04055 Radical SAM superfamily BCJMU07_1750 PF13302 Acetyltransferase (GNAT) domain BCJMU07_1751 PF00486 Transcriptional regulatory protein, C terminal BCJMU07_1751 PF00072 Response regulator receiver domain BCJMU07_1752 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCJMU07_1752 PF00512 His Kinase A (phospho-acceptor) domain BCJMU07_1755 PF01566 Natural resistance-associated macrophage protein BCJMU07_1756 PF17773 UPF0176 acylphosphatase like domain BCJMU07_1756 PF12368 Rhodanase C-terminal BCJMU07_1756 PF00581 Rhodanese-like domain BCJMU07_1758 PF08546 Ketopantoate reductase PanE/ApbA C terminal BCJMU07_1758 PF02558 Ketopantoate reductase PanE/ApbA BCJMU07_1760 PF13520 Amino acid permease BCJMU07_1762 PF05791 Bacillus haemolytic enterotoxin (HBL) BCJMU07_1763 PF05791 Bacillus haemolytic enterotoxin (HBL) BCJMU07_1765 PF04198 Putative sugar-binding domain BCJMU07_1766 PF01791 DeoC/LacD family aldolase BCJMU07_1767 PF01773 Na+ dependent nucleoside transporter N-terminus BCJMU07_1767 PF07662 Na+ dependent nucleoside transporter C-terminus BCJMU07_1768 PF02885 Glycosyl transferase family, helical bundle domain BCJMU07_1768 PF00591 Glycosyl transferase family, a/b domain BCJMU07_1768 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain BCJMU07_1769 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BCJMU07_1770 PF05979 Bacterial protein of unknown function (DUF896) BCJMU07_1773 PF05195 Aminopeptidase P, N-terminal domain BCJMU07_1773 PF00557 Metallopeptidase family M24 BCJMU07_1774 PF00394 Multicopper oxidase BCJMU07_1774 PF07731 Multicopper oxidase BCJMU07_1774 PF07732 Multicopper oxidase BCJMU07_1775 PF01551 Peptidase family M23 BCJMU07_1777 PF13342 C-terminal repeat of topoisomerase BCJMU07_1777 PF01396 Topoisomerase DNA binding C4 zinc finger BCJMU07_1777 PF01131 DNA topoisomerase BCJMU07_1777 PF01751 Toprim domain BCJMU07_1780 PF02525 Flavodoxin-like fold BCJMU07_1781 PF05525 Branched-chain amino acid transport protein BCJMU07_1783 PF04234 CopC domain BCJMU07_1783 PF05425 Copper resistance protein D BCJMU07_1783 PF13115 YtkA-like BCJMU07_1784 PF07987 Domain of unkown function (DUF1775) BCJMU07_1786 PF00892 EamA-like transporter family BCJMU07_1787 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BCJMU07_1787 PF03466 LysR substrate binding domain BCJMU07_1788 PF13276 HTH-like domain BCJMU07_1788 PF00665 Integrase core domain BCJMU07_1788 PF13333 Integrase core domain BCJMU07_1789 PF13276 HTH-like domain BCJMU07_1789 PF00665 Integrase core domain BCJMU07_1789 PF13333 Integrase core domain BCJMU07_1790 PF02082 Transcriptional regulator BCJMU07_1791 PF01323 DSBA-like thioredoxin domain BCJMU07_1792 PF00881 Nitroreductase family BCJMU07_1794 PF01425 Amidase BCJMU07_1795 PF01594 AI-2E family transporter BCJMU07_1796 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BCJMU07_1796 PF00056 lactate/malate dehydrogenase, NAD binding domain BCJMU07_1797 PF01593 Flavin containing amine oxidoreductase BCJMU07_1798 PF07683 Cobalamin synthesis protein cobW C-terminal domain BCJMU07_1798 PF02492 CobW/HypB/UreG, nucleotide-binding domain BCJMU07_1801 PF00501 AMP-binding enzyme BCJMU07_1801 PF13193 AMP-binding enzyme C-terminal domain BCJMU07_1802 PF01575 MaoC like domain BCJMU07_1803 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BCJMU07_1803 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BCJMU07_1805 PF00005 ABC transporter BCJMU07_1805 PF12399 Branched-chain amino acid ATP-binding cassette transporter BCJMU07_1806 PF00005 ABC transporter BCJMU07_1807 PF02653 Branched-chain amino acid transport system / permease component BCJMU07_1809 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BCJMU07_1809 PF03466 LysR substrate binding domain BCJMU07_1813 PF01047 MarR family BCJMU07_1815 PF01654 Cytochrome bd terminal oxidase subunit I BCJMU07_1816 PF02322 Cytochrome bd terminal oxidase subunit II BCJMU07_1817 PF00664 ABC transporter transmembrane region BCJMU07_1817 PF00005 ABC transporter BCJMU07_1818 PF00664 ABC transporter transmembrane region BCJMU07_1818 PF00005 ABC transporter BCJMU07_1821 PF17676 LD-carboxypeptidase C-terminal domain BCJMU07_1821 PF02016 LD-carboxypeptidase N-terminal domain BCJMU07_1822 PF07943 Penicillin-binding protein 5, C-terminal domain BCJMU07_1822 PF00768 D-alanyl-D-alanine carboxypeptidase BCJMU07_1825 PF01476 LysM domain BCJMU07_1825 PF00877 NlpC/P60 family BCJMU07_1827 PF00005 ABC transporter BCJMU07_1827 PF00664 ABC transporter transmembrane region BCJMU07_1828 PF00486 Transcriptional regulatory protein, C terminal BCJMU07_1828 PF00072 Response regulator receiver domain BCJMU07_1829 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCJMU07_1829 PF00512 His Kinase A (phospho-acceptor) domain BCJMU07_1829 PF16736 Single Cache-like BCJMU07_1829 PF00989 PAS fold BCJMU07_1830 PF00106 short chain dehydrogenase BCJMU07_1831 PF01596 O-methyltransferase BCJMU07_1832 PF04439 Streptomycin adenylyltransferase BCJMU07_1833 PF01522 Polysaccharide deacetylase BCJMU07_1838 PF03447 Homoserine dehydrogenase, NAD binding domain BCJMU07_1838 PF01842 ACT domain BCJMU07_1838 PF00742 Homoserine dehydrogenase BCJMU07_1839 PF00291 Pyridoxal-phosphate dependent enzyme BCJMU07_1840 PF00288 GHMP kinases N terminal domain BCJMU07_1840 PF08544 GHMP kinases C terminal BCJMU07_1843 PF03816 Cell envelope-related transcriptional attenuator domain BCJMU07_1845 PF00486 Transcriptional regulatory protein, C terminal BCJMU07_1845 PF00072 Response regulator receiver domain BCJMU07_1846 PF16736 Single Cache-like BCJMU07_1846 PF00989 PAS fold BCJMU07_1846 PF00512 His Kinase A (phospho-acceptor) domain BCJMU07_1846 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCJMU07_1847 PF01522 Polysaccharide deacetylase BCJMU07_1849 PF02308 MgtC family BCJMU07_1850 PF00583 Acetyltransferase (GNAT) family BCJMU07_1851 PF04183 IucA / IucC family BCJMU07_1851 PF06276 Ferric iron reductase FhuF-like transporter BCJMU07_1852 PF06276 Ferric iron reductase FhuF-like transporter BCJMU07_1852 PF04183 IucA / IucC family BCJMU07_1853 PF13193 AMP-binding enzyme C-terminal domain BCJMU07_1853 PF00501 AMP-binding enzyme BCJMU07_1856 PF01261 Xylose isomerase-like TIM barrel BCJMU07_1857 PF00269 Small, acid-soluble spore proteins, alpha/beta type BCJMU07_1858 PF07690 Major Facilitator Superfamily BCJMU07_1859 PF01810 LysE type translocator BCJMU07_1860 PF00392 Bacterial regulatory proteins, gntR family BCJMU07_1860 PF00155 Aminotransferase class I and II BCJMU07_1862 PF01734 Patatin-like phospholipase BCJMU07_1866 PF13344 Haloacid dehalogenase-like hydrolase BCJMU07_1866 PF00293 NUDIX domain BCJMU07_1867 PF02540 NAD synthase BCJMU07_1868 PF02687 FtsX-like permease family BCJMU07_1869 PF18277 AbrB C-terminal domain BCJMU07_1869 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin BCJMU07_1870 PF00082 Subtilase family BCJMU07_1871 PF01022 Bacterial regulatory protein, arsR family BCJMU07_1872 PF00248 Aldo/keto reductase family BCJMU07_1873 PF07690 Major Facilitator Superfamily BCJMU07_1877 PF03193 RsgA GTPase BCJMU07_1878 PF02743 Cache domain BCJMU07_1878 PF00672 HAMP domain BCJMU07_1878 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BCJMU07_1882 PF00210 Ferritin-like domain BCJMU07_1885 PF00296 Luciferase-like monooxygenase BCJMU07_1887 PF01593 Flavin containing amine oxidoreductase BCJMU07_1889 PF00248 Aldo/keto reductase family BCJMU07_1890 PF07683 Cobalamin synthesis protein cobW C-terminal domain BCJMU07_1890 PF02492 CobW/HypB/UreG, nucleotide-binding domain BCJMU07_1891 PF00583 Acetyltransferase (GNAT) family BCJMU07_1894 PF04740 LXG domain of WXG superfamily BCJMU07_1894 PF14436 Bacterial EndoU nuclease BCJMU07_1895 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment BCJMU07_1895 PF01297 Zinc-uptake complex component A periplasmic BCJMU07_1897 PF13460 NAD(P)H-binding BCJMU07_1898 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BCJMU07_1899 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BCJMU07_1899 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain BCJMU07_1901 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BCJMU07_1902 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BCJMU07_1904 PF00300 Histidine phosphatase superfamily (branch 1) BCJMU07_1906 PF08757 CotH kinase protein BCJMU07_1907 PF00293 NUDIX domain BCJMU07_1908 PF09335 SNARE associated Golgi protein BCJMU07_1909 PF14667 Polysaccharide biosynthesis C-terminal domain BCJMU07_1909 PF01943 Polysaccharide biosynthesis protein BCJMU07_1911 PF03773 Predicted permease BCJMU07_1912 PF09323 Domain of unknown function (DUF1980) BCJMU07_1913 PF03061 Thioesterase superfamily BCJMU07_1914 PF13091 PLD-like domain BCJMU07_1914 PF13396 Phospholipase_D-nuclease N-terminal BCJMU07_1917 PF13460 NAD(P)H-binding BCJMU07_1918 PF04306 Protein of unknown function (DUF456) BCJMU07_1919 PF00571 CBS domain BCJMU07_1919 PF03471 Transporter associated domain BCJMU07_1919 PF01595 Cyclin M transmembrane N-terminal domain BCJMU07_1923 PF05525 Branched-chain amino acid transport protein BCJMU07_1924 PF01588 Putative tRNA binding domain BCJMU07_1927 PF07454 Stage II sporulation protein P (SpoIIP) BCJMU07_1929 PF02557 D-alanyl-D-alanine carboxypeptidase BCJMU07_1931 PF01425 Amidase BCJMU07_1932 PF07690 Major Facilitator Superfamily BCJMU07_1935 PF01145 SPFH domain / Band 7 family BCJMU07_1936 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal BCJMU07_1936 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal BCJMU07_1938 PF06574 FAD synthetase BCJMU07_1939 PF06052 3-hydroxyanthranilic acid dioxygenase BCJMU07_1941 PF01042 Endoribonuclease L-PSP BCJMU07_1942 PF00171 Aldehyde dehydrogenase family BCJMU07_1943 PF01557 Fumarylacetoacetate (FAA) hydrolase family BCJMU07_1944 PF01118 Semialdehyde dehydrogenase, NAD binding domain BCJMU07_1944 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation BCJMU07_1945 PF07836 DmpG-like communication domain BCJMU07_1945 PF00682 HMGL-like BCJMU07_1947 PF01361 Tautomerase enzyme BCJMU07_1948 PF00300 Histidine phosphatase superfamily (branch 1) BCJMU07_1951 PF01168 Alanine racemase, N-terminal domain BCJMU07_1951 PF00842 Alanine racemase, C-terminal domain BCJMU07_1952 PF13847 Methyltransferase domain BCJMU07_1955 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase BCJMU07_1956 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BCJMU07_1956 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BCJMU07_1957 PF00155 Aminotransferase class I and II BCJMU07_1957 PF00392 Bacterial regulatory proteins, gntR family BCJMU07_1959 PF01348 Type II intron maturase BCJMU07_1959 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) BCJMU07_1960 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) BCJMU07_1962 PF00155 Aminotransferase class I and II BCJMU07_1962 PF00392 Bacterial regulatory proteins, gntR family BCJMU07_1968 PF00583 Acetyltransferase (GNAT) family BCJMU07_1985 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) BCJMU07_1985 PF01348 Type II intron maturase BCJMU07_1988 PF09579 Sporulation protein YtfJ (Spore_YtfJ) BCJMU07_1993 PF01209 ubiE/COQ5 methyltransferase family BCJMU07_1994 PF01268 Formate--tetrahydrofolate ligase BCJMU07_1996 PF00271 Helicase conserved C-terminal domain BCJMU07_1996 PF00270 DEAD/DEAH box helicase BCJMU07_1997 PF01261 Xylose isomerase-like TIM barrel BCJMU07_1998 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BCJMU07_2000 PF00107 Zinc-binding dehydrogenase BCJMU07_2000 PF08240 Alcohol dehydrogenase GroES-like domain BCJMU07_2001 PF04542 Sigma-70 region 2 BCJMU07_2001 PF08281 Sigma-70, region 4 BCJMU07_2003 PF01613 Flavin reductase like domain BCJMU07_2003 PF00258 Flavodoxin BCJMU07_2005 PF00255 Glutathione peroxidase BCJMU07_2006 PF01841 Transglutaminase-like superfamily BCJMU07_2006 PF13559 Domain of unknown function (DUF4129) BCJMU07_2006 PF11992 Domain of unknown function (DUF3488) BCJMU07_2007 PF01882 Protein of unknown function DUF58 BCJMU07_2008 PF17863 AAA lid domain BCJMU07_2008 PF07726 ATPase family associated with various cellular activities (AAA) BCJMU07_2012 PF14710 Respiratory nitrate reductase alpha N-terminal BCJMU07_2012 PF00384 Molybdopterin oxidoreductase BCJMU07_2012 PF01568 Molydopterin dinucleotide binding domain BCJMU07_2013 PF13247 4Fe-4S dicluster domain BCJMU07_2013 PF14711 Respiratory nitrate reductase beta C-terminal BCJMU07_2014 PF02613 Nitrate reductase delta subunit BCJMU07_2015 PF02665 Nitrate reductase gamma subunit BCJMU07_2016 PF00325 Bacterial regulatory proteins, crp family BCJMU07_2016 PF00027 Cyclic nucleotide-binding domain BCJMU07_2017 PF06463 Molybdenum Cofactor Synthesis C BCJMU07_2017 PF04055 Radical SAM superfamily BCJMU07_2018 PF00899 ThiF family BCJMU07_2019 PF00994 Probable molybdopterin binding domain BCJMU07_2019 PF03453 MoeA N-terminal region (domain I and II) BCJMU07_2019 PF03454 MoeA C-terminal region (domain IV) BCJMU07_2020 PF02391 MoaE protein BCJMU07_2022 PF07690 Major Facilitator Superfamily BCJMU07_2025 PF01903 CbiX BCJMU07_2026 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BCJMU07_2027 PF00355 Rieske [2Fe-2S] domain BCJMU07_2028 PF18267 Rubredoxin NAD+ reductase C-terminal domain BCJMU07_2028 PF07992 Pyridine nucleotide-disulphide oxidoreductase BCJMU07_2028 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BCJMU07_2028 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BCJMU07_2028 PF04324 BFD-like [2Fe-2S] binding domain BCJMU07_2029 PF01814 Hemerythrin HHE cation binding domain BCJMU07_2029 PF04405 Domain of Unknown function (DUF542) BCJMU07_2037 PF04232 Stage V sporulation protein S (SpoVS) BCJMU07_2039 PF01966 HD domain BCJMU07_2040 PF12848 ABC transporter BCJMU07_2040 PF16326 ABC transporter C-terminal domain BCJMU07_2040 PF00005 ABC transporter BCJMU07_2042 PF13333 Integrase core domain BCJMU07_2042 PF13276 HTH-like domain BCJMU07_2042 PF00665 Integrase core domain BCJMU07_2046 PF00436 Single-strand binding protein family BCJMU07_2048 PF01494 FAD binding domain BCJMU07_2049 PF13769 Virulence factor BCJMU07_2049 PF08712 Scaffold protein Nfu/NifU N terminal BCJMU07_2051 PF06491 Disulphide isomerase BCJMU07_2052 PF04445 Putative SAM-dependent methyltransferase BCJMU07_2053 PF03485 Arginyl tRNA synthetase N terminal domain BCJMU07_2053 PF05746 DALR anticodon binding domain BCJMU07_2053 PF00750 tRNA synthetases class I (R) BCJMU07_2057 PF00133 tRNA synthetases class I (I, L, M and V) BCJMU07_2057 PF08264 Anticodon-binding domain of tRNA BCJMU07_2062 PF08245 Mur ligase middle domain BCJMU07_2062 PF02875 Mur ligase family, glutamate ligase domain BCJMU07_2062 PF01225 Mur ligase family, catalytic domain BCJMU07_2063 PF00152 tRNA synthetases class II (D, K and N) BCJMU07_2063 PF01336 OB-fold nucleic acid binding domain BCJMU07_2067 PF01580 FtsK/SpoIIIE family BCJMU07_2067 PF12538 DNA transporter BCJMU07_2072 PF14449 Pre-toxin TG BCJMU07_2072 PF04740 LXG domain of WXG superfamily BCJMU07_2087 PF02595 Glycerate kinase family BCJMU07_2088 PF00939 Sodium:sulfate symporter transmembrane region BCJMU07_2089 PF00072 Response regulator receiver domain BCJMU07_2089 PF00486 Transcriptional regulatory protein, C terminal BCJMU07_2090 PF00512 His Kinase A (phospho-acceptor) domain BCJMU07_2090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCJMU07_2090 PF00672 HAMP domain BCJMU07_2093 PF00209 Sodium:neurotransmitter symporter family BCJMU07_2094 PF00209 Sodium:neurotransmitter symporter family BCJMU07_2097 PF10997 Alternate to MurJ BCJMU07_2098 PF13419 Haloacid dehalogenase-like hydrolase BCJMU07_2100 PF00465 Iron-containing alcohol dehydrogenase BCJMU07_2101 PF01177 Asp/Glu/Hydantoin racemase BCJMU07_2102 PF01980 tRNA-methyltransferase O BCJMU07_2103 PF00583 Acetyltransferase (GNAT) family BCJMU07_2106 PF00005 ABC transporter BCJMU07_2107 PF05975 Bacterial ABC transporter protein EcsB BCJMU07_2108 PF14005 YpjP-like protein BCJMU07_2109 PF13419 Haloacid dehalogenase-like hydrolase BCJMU07_2113 PF00144 Beta-lactamase BCJMU07_2113 PF07930 D-aminopeptidase, domain B BCJMU07_2114 PF05592 Bacterial alpha-L-rhamnosidase concanavalin-like domain BCJMU07_2114 PF17390 Bacterial alpha-L-rhamnosidase C-terminal domain BCJMU07_2114 PF17389 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain BCJMU07_2114 PF08531 Alpha-L-rhamnosidase N-terminal domain BCJMU07_2115 PF08531 Alpha-L-rhamnosidase N-terminal domain BCJMU07_2115 PF17390 Bacterial alpha-L-rhamnosidase C-terminal domain BCJMU07_2115 PF17389 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain BCJMU07_2115 PF05592 Bacterial alpha-L-rhamnosidase concanavalin-like domain BCJMU07_2116 PF08531 Alpha-L-rhamnosidase N-terminal domain BCJMU07_2116 PF17390 Bacterial alpha-L-rhamnosidase C-terminal domain BCJMU07_2116 PF17389 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain BCJMU07_2116 PF05592 Bacterial alpha-L-rhamnosidase concanavalin-like domain BCJMU07_2117 PF00303 Thymidylate synthase BCJMU07_2118 PF00186 Dihydrofolate reductase BCJMU07_2119 PF00905 Penicillin binding protein transpeptidase domain BCJMU07_2119 PF03717 Penicillin-binding Protein dimerisation domain BCJMU07_2119 PF05223 NTF2-like N-terminal transpeptidase domain BCJMU07_2120 PF02525 Flavodoxin-like fold BCJMU07_2121 PF01553 Acyltransferase BCJMU07_2122 PF03006 Haemolysin-III related BCJMU07_2123 PF02416 mttA/Hcf106 family BCJMU07_2124 PF00902 Sec-independent protein translocase protein (TatC) BCJMU07_2126 PF02645 Uncharacterised protein, DegV family COG1307 BCJMU07_2128 PF02630 SCO1/SenC BCJMU07_2129 PF00011 Hsp20/alpha crystallin family BCJMU07_2130 PF13537 Glutamine amidotransferase domain BCJMU07_2130 PF00733 Asparagine synthase BCJMU07_2133 PF01497 Periplasmic binding protein BCJMU07_2134 PF01063 Amino-transferase class IV BCJMU07_2135 PF00881 Nitroreductase family BCJMU07_2138 PF00857 Isochorismatase family BCJMU07_2139 PF00293 NUDIX domain BCJMU07_2140 PF00011 Hsp20/alpha crystallin family BCJMU07_2141 PF00924 Mechanosensitive ion channel BCJMU07_2142 PF07730 Histidine kinase BCJMU07_2142 PF13185 GAF domain BCJMU07_2143 PF00072 Response regulator receiver domain BCJMU07_2143 PF00196 Bacterial regulatory proteins, luxR family BCJMU07_2144 PF01380 SIS domain BCJMU07_2144 PF01418 Helix-turn-helix domain, rpiR family BCJMU07_2145 PF08240 Alcohol dehydrogenase GroES-like domain BCJMU07_2145 PF00107 Zinc-binding dehydrogenase BCJMU07_2148 PF00144 Beta-lactamase BCJMU07_2150 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BCJMU07_2150 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BCJMU07_2151 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BCJMU07_2151 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BCJMU07_2154 PF03358 NADPH-dependent FMN reductase BCJMU07_2157 PF00005 ABC transporter BCJMU07_2157 PF00571 CBS domain BCJMU07_2158 PF00528 Binding-protein-dependent transport system inner membrane component BCJMU07_2159 PF13520 Amino acid permease BCJMU07_2166 PF01595 Cyclin M transmembrane N-terminal domain BCJMU07_2166 PF03471 Transporter associated domain BCJMU07_2166 PF00571 CBS domain BCJMU07_2167 PF00171 Aldehyde dehydrogenase family BCJMU07_2168 PF07997 Protein of unknown function (DUF1694) BCJMU07_2169 PF09385 Histidine kinase N terminal BCJMU07_2171 PF00202 Aminotransferase class-III BCJMU07_2172 PF01144 Coenzyme A transferase BCJMU07_2173 PF01144 Coenzyme A transferase BCJMU07_2174 PF07687 Peptidase dimerisation domain BCJMU07_2174 PF01546 Peptidase family M20/M25/M40 BCJMU07_2175 PF00583 Acetyltransferase (GNAT) family BCJMU07_2176 PF00158 Sigma-54 interaction domain BCJMU07_2176 PF02954 Bacterial regulatory protein, Fis family BCJMU07_2176 PF13426 PAS domain BCJMU07_2177 PF12544 Lysine-2,3-aminomutase BCJMU07_2178 PF14122 YokU-like protein, putative antitoxin BCJMU07_2179 PF06855 YozE SAM-like fold BCJMU07_2182 PF14162 YozD-like protein BCJMU07_2184 PF00069 Protein kinase domain BCJMU07_2184 PF08239 Bacterial SH3 domain BCJMU07_2185 PF07070 SpoOM protein BCJMU07_2186 PF01569 PAP2 superfamily BCJMU07_2187 PF01545 Cation efflux family BCJMU07_2187 PF16916 Dimerisation domain of Zinc Transporter BCJMU07_2188 PF00085 Thioredoxin BCJMU07_2205 PF10676 Spore germination protein gerPA/gerPF BCJMU07_2208 PF00106 short chain dehydrogenase BCJMU07_2212 PF00912 Transglycosylase BCJMU07_2212 PF00905 Penicillin binding protein transpeptidase domain BCJMU07_2214 PF07690 Major Facilitator Superfamily BCJMU07_2215 PF01521 Iron-sulphur cluster biosynthesis BCJMU07_2216 PF00285 Citrate synthase, C-terminal domain BCJMU07_2217 PF03972 MmgE/PrpD family BCJMU07_2219 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BCJMU07_2219 PF02770 Acyl-CoA dehydrogenase, middle domain BCJMU07_2219 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BCJMU07_2220 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BCJMU07_2220 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BCJMU07_2221 PF00171 Aldehyde dehydrogenase family BCJMU07_2222 PF01810 LysE type translocator BCJMU07_2223 PF00378 Enoyl-CoA hydratase/isomerase BCJMU07_2225 PF10763 Protein of unknown function (DUF2584) BCJMU07_2226 PF12320 Type 5 capsule protein repressor C-terminal domain BCJMU07_2226 PF00149 Calcineurin-like phosphoesterase BCJMU07_2227 PF13476 AAA domain BCJMU07_2229 PF01022 Bacterial regulatory protein, arsR family BCJMU07_2231 PF07690 Major Facilitator Superfamily BCJMU07_2233 PF00106 short chain dehydrogenase BCJMU07_2234 PF00425 chorismate binding enzyme BCJMU07_2235 PF13193 AMP-binding enzyme C-terminal domain BCJMU07_2235 PF00501 AMP-binding enzyme BCJMU07_2236 PF00550 Phosphopantetheine attachment site BCJMU07_2236 PF00857 Isochorismatase family BCJMU07_2237 PF13193 AMP-binding enzyme C-terminal domain BCJMU07_2237 PF00975 Thioesterase domain BCJMU07_2237 PF00501 AMP-binding enzyme BCJMU07_2237 PF00550 Phosphopantetheine attachment site BCJMU07_2237 PF00668 Condensation domain BCJMU07_2238 PF03621 MbtH-like protein BCJMU07_2239 PF07690 Major Facilitator Superfamily BCJMU07_2242 PF00216 Bacterial DNA-binding protein BCJMU07_2244 PF05163 DinB family BCJMU07_2245 PF00082 Subtilase family BCJMU07_2246 PF01235 Sodium:alanine symporter family BCJMU07_2249 PF16291 Domain of unknown function (DUF4937 BCJMU07_2250 PF01479 S4 domain BCJMU07_2250 PF00849 RNA pseudouridylate synthase BCJMU07_2251 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BCJMU07_2251 PF03129 Anticodon binding domain BCJMU07_2251 PF02824 TGS domain BCJMU07_2251 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BCJMU07_2253 PF00005 ABC transporter BCJMU07_2256 PF12146 Serine aminopeptidase, S33 BCJMU07_2257 PF07690 Major Facilitator Superfamily BCJMU07_2261 PF13649 Methyltransferase domain BCJMU07_2271 PF00753 Metallo-beta-lactamase superfamily BCJMU07_2271 PF16123 Hydroxyacylglutathione hydrolase C-terminus BCJMU07_2273 PF03176 MMPL family BCJMU07_2275 PF00302 Chloramphenicol acetyltransferase BCJMU07_2277 PF13333 Integrase core domain BCJMU07_2277 PF00665 Integrase core domain BCJMU07_2277 PF13276 HTH-like domain BCJMU07_2278 PF13276 HTH-like domain BCJMU07_2278 PF00665 Integrase core domain BCJMU07_2278 PF13333 Integrase core domain BCJMU07_2281 PF00583 Acetyltransferase (GNAT) family BCJMU07_2287 PF01593 Flavin containing amine oxidoreductase BCJMU07_2289 PF08241 Methyltransferase domain BCJMU07_2290 PF13302 Acetyltransferase (GNAT) domain BCJMU07_2292 PF00313 'Cold-shock' DNA-binding domain BCJMU07_2297 PF03466 LysR substrate binding domain BCJMU07_2297 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BCJMU07_2298 PF01118 Semialdehyde dehydrogenase, NAD binding domain BCJMU07_2298 PF02774 Semialdehyde dehydrogenase, dimerisation domain BCJMU07_2301 PF03466 LysR substrate binding domain BCJMU07_2301 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BCJMU07_2302 PF03475 3-alpha domain BCJMU07_2302 PF03473 MOSC domain BCJMU07_2306 PF00664 ABC transporter transmembrane region BCJMU07_2306 PF00005 ABC transporter BCJMU07_2307 PF00005 ABC transporter BCJMU07_2307 PF00664 ABC transporter transmembrane region BCJMU07_2308 PF00005 ABC transporter BCJMU07_2308 PF00664 ABC transporter transmembrane region BCJMU07_2311 PF01810 LysE type translocator BCJMU07_2312 PF07883 Cupin domain BCJMU07_2312 PF01381 Helix-turn-helix BCJMU07_2319 PF02824 TGS domain BCJMU07_2319 PF04607 Region found in RelA / SpoT proteins BCJMU07_2319 PF13291 ACT domain BCJMU07_2321 PF00890 FAD binding domain BCJMU07_2322 PF12680 SnoaL-like domain BCJMU07_2322 PF04542 Sigma-70 region 2 BCJMU07_2322 PF08281 Sigma-70, region 4 BCJMU07_2327 PF02638 Glycosyl hydrolase-like 10 BCJMU07_2329 PF02378 Phosphotransferase system, EIIC BCJMU07_2331 PF03702 Anhydro-N-acetylmuramic acid kinase BCJMU07_2332 PF01869 BadF/BadG/BcrA/BcrD ATPase family BCJMU07_2333 PF02660 Glycerol-3-phosphate acyltransferase BCJMU07_2334 PF00266 Aminotransferase class-V BCJMU07_2335 PF00291 Pyridoxal-phosphate dependent enzyme BCJMU07_2342 PF16123 Hydroxyacylglutathione hydrolase C-terminus BCJMU07_2342 PF00753 Metallo-beta-lactamase superfamily BCJMU07_2345 PF00270 DEAD/DEAH box helicase BCJMU07_2345 PF00271 Helicase conserved C-terminal domain BCJMU07_2349 PF17932 Tetracyclin repressor-like, C-terminal domain BCJMU07_2349 PF00440 Bacterial regulatory proteins, tetR family BCJMU07_2352 PF12704 MacB-like periplasmic core domain BCJMU07_2352 PF00005 ABC transporter BCJMU07_2352 PF02687 FtsX-like permease family BCJMU07_2353 PF09313 Domain of unknown function (DUF1971) BCJMU07_2353 PF03848 Tellurite resistance protein TehB BCJMU07_2355 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BCJMU07_2355 PF00205 Thiamine pyrophosphate enzyme, central domain BCJMU07_2355 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BCJMU07_2356 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BCJMU07_2356 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BCJMU07_2356 PF00205 Thiamine pyrophosphate enzyme, central domain BCJMU07_2357 PF00589 Phage integrase family BCJMU07_2357 PF14659 Phage integrase, N-terminal SAM-like domain BCJMU07_2374 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BCJMU07_2374 PF00205 Thiamine pyrophosphate enzyme, central domain BCJMU07_2374 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BCJMU07_2375 PF12802 MarR family BCJMU07_2376 PF00300 Histidine phosphatase superfamily (branch 1) BCJMU07_2377 PF14171 Toxin SpoIISA, type II toxin-antitoxin system BCJMU07_2383 PF07687 Peptidase dimerisation domain BCJMU07_2383 PF01546 Peptidase family M20/M25/M40 BCJMU07_2386 PF04542 Sigma-70 region 2 BCJMU07_2386 PF08281 Sigma-70, region 4 BCJMU07_2388 PF00905 Penicillin binding protein transpeptidase domain BCJMU07_2388 PF03717 Penicillin-binding Protein dimerisation domain BCJMU07_2389 PF00905 Penicillin binding protein transpeptidase domain BCJMU07_2389 PF03717 Penicillin-binding Protein dimerisation domain BCJMU07_2391 PF00149 Calcineurin-like phosphoesterase BCJMU07_2392 PF07282 Putative transposase DNA-binding domain BCJMU07_2392 PF01385 Probable transposase BCJMU07_2392 PF12323 Helix-turn-helix domain BCJMU07_2396 PF02770 Acyl-CoA dehydrogenase, middle domain BCJMU07_2396 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BCJMU07_2396 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BCJMU07_2397 PF00289 Biotin carboxylase, N-terminal domain BCJMU07_2397 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BCJMU07_2397 PF02785 Biotin carboxylase C-terminal domain BCJMU07_2398 PF00364 Biotin-requiring enzyme BCJMU07_2399 PF00682 HMGL-like BCJMU07_2400 PF00378 Enoyl-CoA hydratase/isomerase BCJMU07_2401 PF01039 Carboxyl transferase domain BCJMU07_2402 PF16177 Acetyl-coenzyme A synthetase N-terminus BCJMU07_2402 PF00501 AMP-binding enzyme BCJMU07_2402 PF13193 AMP-binding enzyme C-terminal domain BCJMU07_2404 PF00583 Acetyltransferase (GNAT) family BCJMU07_2405 PF00485 Phosphoribulokinase / Uridine kinase family BCJMU07_2406 PF00561 alpha/beta hydrolase fold BCJMU07_2407 PF05163 DinB family BCJMU07_2408 PF07943 Penicillin-binding protein 5, C-terminal domain BCJMU07_2408 PF00768 D-alanyl-D-alanine carboxypeptidase BCJMU07_2409 PF00512 His Kinase A (phospho-acceptor) domain BCJMU07_2409 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCJMU07_2410 PF00486 Transcriptional regulatory protein, C terminal BCJMU07_2410 PF00072 Response regulator receiver domain BCJMU07_2411 PF01966 HD domain BCJMU07_2412 PF13021 Domain of unknown function (DUF3885) BCJMU07_2413 PF01048 Phosphorylase superfamily BCJMU07_2417 PF02868 Thermolysin metallopeptidase, alpha-helical domain BCJMU07_2417 PF01447 Thermolysin metallopeptidase, catalytic domain BCJMU07_2417 PF03413 Peptidase propeptide and YPEB domain BCJMU07_2417 PF07504 Fungalysin/Thermolysin Propeptide Motif BCJMU07_2421 PF17755 UvrA DNA-binding domain BCJMU07_2421 PF17760 UvrA interaction domain BCJMU07_2421 PF17755 UvrA DNA-binding domain BCJMU07_2421 PF17760 UvrA interaction domain BCJMU07_2426 PF09278 MerR, DNA binding BCJMU07_2426 PF00376 MerR family regulatory protein BCJMU07_2427 PF07690 Major Facilitator Superfamily BCJMU07_2429 PF13847 Methyltransferase domain BCJMU07_2432 PF01636 Phosphotransferase enzyme family BCJMU07_2433 PF12833 Helix-turn-helix domain BCJMU07_2437 PF00155 Aminotransferase class I and II BCJMU07_2437 PF00392 Bacterial regulatory proteins, gntR family BCJMU07_2441 PF08240 Alcohol dehydrogenase GroES-like domain BCJMU07_2441 PF00107 Zinc-binding dehydrogenase BCJMU07_2445 PF08450 SMP-30/Gluconolactonase/LRE-like region BCJMU07_2448 PF01921 tRNA synthetases class I (K) BCJMU07_2449 PF07486 Cell Wall Hydrolase BCJMU07_2451 PF00486 Transcriptional regulatory protein, C terminal BCJMU07_2451 PF00072 Response regulator receiver domain BCJMU07_2452 PF00072 Response regulator receiver domain BCJMU07_2452 PF00486 Transcriptional regulatory protein, C terminal BCJMU07_2453 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCJMU07_2455 PF00005 ABC transporter BCJMU07_2455 PF12848 ABC transporter BCJMU07_2458 PF00005 ABC transporter BCJMU07_2459 PF02687 FtsX-like permease family BCJMU07_2463 PF03447 Homoserine dehydrogenase, NAD binding domain BCJMU07_2463 PF00742 Homoserine dehydrogenase BCJMU07_2463 PF01842 ACT domain BCJMU07_2464 PF00155 Aminotransferase class I and II BCJMU07_2464 PF00392 Bacterial regulatory proteins, gntR family BCJMU07_2465 PF01820 D-ala D-ala ligase N-terminus BCJMU07_2465 PF07478 D-ala D-ala ligase C-terminus BCJMU07_2466 PF03070 TENA/THI-4/PQQC family BCJMU07_2484 PF00067 Cytochrome P450 BCJMU07_2487 PF00132 Bacterial transferase hexapeptide (six repeats) BCJMU07_2488 PF07561 Domain of Unknown Function (DUF1540) BCJMU07_2490 PF00067 Cytochrome P450 BCJMU07_2493 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCJMU07_2493 PF00512 His Kinase A (phospho-acceptor) domain BCJMU07_2493 PF00989 PAS fold BCJMU07_2493 PF13188 PAS domain BCJMU07_2493 PF13426 PAS domain BCJMU07_2494 PF00905 Penicillin binding protein transpeptidase domain BCJMU07_2494 PF03717 Penicillin-binding Protein dimerisation domain BCJMU07_2495 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase BCJMU07_2496 PF01177 Asp/Glu/Hydantoin racemase BCJMU07_2497 PF07155 ECF-type riboflavin transporter, S component BCJMU07_2498 PF00005 ABC transporter BCJMU07_2498 PF12558 ATP-binding cassette cobalt transporter BCJMU07_2500 PF00512 His Kinase A (phospho-acceptor) domain BCJMU07_2500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCJMU07_2503 PF04229 GrpB protein BCJMU07_2504 PF08240 Alcohol dehydrogenase GroES-like domain BCJMU07_2504 PF00107 Zinc-binding dehydrogenase BCJMU07_2505 PF01569 PAP2 superfamily BCJMU07_2506 PF03793 PASTA domain BCJMU07_2506 PF03717 Penicillin-binding Protein dimerisation domain BCJMU07_2506 PF00905 Penicillin binding protein transpeptidase domain BCJMU07_2507 PF03793 PASTA domain BCJMU07_2507 PF03717 Penicillin-binding Protein dimerisation domain BCJMU07_2507 PF00905 Penicillin binding protein transpeptidase domain BCJMU07_2508 PF08361 MAATS-type transcriptional repressor, C-terminal region BCJMU07_2508 PF00440 Bacterial regulatory proteins, tetR family BCJMU07_2511 PF00144 Beta-lactamase BCJMU07_2511 PF11954 Domain of unknown function (DUF3471) BCJMU07_2516 PF02796 Helix-turn-helix domain of resolvase BCJMU07_2516 PF00239 Resolvase, N terminal domain BCJMU07_2518 PF01965 DJ-1/PfpI family BCJMU07_2519 PF00144 Beta-lactamase BCJMU07_2521 PF07690 Major Facilitator Superfamily BCJMU07_2524 PF01609 Transposase DDE domain BCJMU07_2525 PF01609 Transposase DDE domain BCJMU07_2526 PF01609 Transposase DDE domain BCJMU07_2527 PF03009 Glycerophosphoryl diester phosphodiesterase family BCJMU07_2531 PF00155 Aminotransferase class I and II BCJMU07_2531 PF00392 Bacterial regulatory proteins, gntR family BCJMU07_2532 PF00892 EamA-like transporter family BCJMU07_2535 PF00293 NUDIX domain BCJMU07_2537 PF00144 Beta-lactamase BCJMU07_2539 PF07690 Major Facilitator Superfamily BCJMU07_2540 PF00293 NUDIX domain BCJMU07_2540 PF09297 NADH pyrophosphatase zinc ribbon domain BCJMU07_2541 PF02768 DNA polymerase III beta subunit, C-terminal domain BCJMU07_2541 PF02767 DNA polymerase III beta subunit, central domain BCJMU07_2541 PF00712 DNA polymerase III beta subunit, N-terminal domain BCJMU07_2542 PF00293 NUDIX domain BCJMU07_2544 PF12706 Beta-lactamase superfamily domain BCJMU07_2547 PF00300 Histidine phosphatase superfamily (branch 1) BCJMU07_2549 PF09234 Domain of unknown function (DUF1963) BCJMU07_2554 PF01734 Patatin-like phospholipase BCJMU07_2555 PF08000 Bacterial PH domain BCJMU07_2558 PF12867 DinB superfamily BCJMU07_2561 PF02673 Bacitracin resistance protein BacA BCJMU07_2562 PF02673 Bacitracin resistance protein BacA BCJMU07_2564 PF01541 GIY-YIG catalytic domain BCJMU07_2572 PF01266 FAD dependent oxidoreductase BCJMU07_2577 PF13419 Haloacid dehalogenase-like hydrolase BCJMU07_2580 PF01569 PAP2 superfamily BCJMU07_2581 PF00128 Alpha amylase, catalytic domain BCJMU07_2581 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BCJMU07_2581 PF03714 Bacterial pullanase-associated domain BCJMU07_2582 PF01447 Thermolysin metallopeptidase, catalytic domain BCJMU07_2582 PF07504 Fungalysin/Thermolysin Propeptide Motif BCJMU07_2582 PF02868 Thermolysin metallopeptidase, alpha-helical domain BCJMU07_2582 PF03413 Peptidase propeptide and YPEB domain BCJMU07_2586 PF00344 SecY translocase BCJMU07_2587 PF08299 Bacterial dnaA protein helix-turn-helix BCJMU07_2587 PF00308 Bacterial dnaA protein BCJMU07_2587 PF11638 DnaA N-terminal domain BCJMU07_2588 PF00892 EamA-like transporter family BCJMU07_2589 PF00392 Bacterial regulatory proteins, gntR family BCJMU07_2589 PF00155 Aminotransferase class I and II BCJMU07_2590 PF00561 alpha/beta hydrolase fold BCJMU07_2594 PF00665 Integrase core domain BCJMU07_2594 PF13276 HTH-like domain BCJMU07_2594 PF13333 Integrase core domain BCJMU07_2595 PF00665 Integrase core domain BCJMU07_2595 PF13276 HTH-like domain BCJMU07_2595 PF13333 Integrase core domain BCJMU07_2598 PF06081 Aromatic acid exporter family member 1 BCJMU07_2601 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) BCJMU07_2602 PF03413 Peptidase propeptide and YPEB domain BCJMU07_2602 PF14620 YpeB sporulation BCJMU07_2603 PF07486 Cell Wall Hydrolase BCJMU07_2603 PF01471 Putative peptidoglycan binding domain BCJMU07_2607 PF03301 Tryptophan 2,3-dioxygenase BCJMU07_2608 PF04199 Putative cyclase BCJMU07_2609 PF00266 Aminotransferase class-V BCJMU07_2610 PF08359 YsiA-like protein, C-terminal region BCJMU07_2610 PF00440 Bacterial regulatory proteins, tetR family BCJMU07_2611 PF13344 Haloacid dehalogenase-like hydrolase BCJMU07_2611 PF00293 NUDIX domain BCJMU07_2615 PF01590 GAF domain BCJMU07_2615 PF02954 Bacterial regulatory protein, Fis family BCJMU07_2615 PF00158 Sigma-54 interaction domain BCJMU07_2618 PF13302 Acetyltransferase (GNAT) domain BCJMU07_2619 PF00455 DeoR C terminal sensor domain BCJMU07_2619 PF08220 DeoR-like helix-turn-helix domain BCJMU07_2622 PF00403 Heavy-metal-associated domain BCJMU07_2622 PF07992 Pyridine nucleotide-disulphide oxidoreductase BCJMU07_2622 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BCJMU07_2623 PF02082 Transcriptional regulator BCJMU07_2626 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BCJMU07_2626 PF07992 Pyridine nucleotide-disulphide oxidoreductase BCJMU07_2627 PF00364 Biotin-requiring enzyme BCJMU07_2627 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BCJMU07_2627 PF02817 e3 binding domain BCJMU07_2628 PF02780 Transketolase, C-terminal domain BCJMU07_2628 PF02779 Transketolase, pyrimidine binding domain BCJMU07_2629 PF00676 Dehydrogenase E1 component BCJMU07_2631 PF00106 short chain dehydrogenase BCJMU07_2632 PF04229 GrpB protein BCJMU07_2632 PF13673 Acetyltransferase (GNAT) domain BCJMU07_2633 PF00485 Phosphoribulokinase / Uridine kinase family BCJMU07_2636 PF00293 NUDIX domain BCJMU07_2641 PF00528 Binding-protein-dependent transport system inner membrane component BCJMU07_2642 PF00571 CBS domain BCJMU07_2642 PF00005 ABC transporter BCJMU07_2643 PF04069 Substrate binding domain of ABC-type glycine betaine transport system BCJMU07_2644 PF00574 Clp protease BCJMU07_2647 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) BCJMU07_2648 PF13673 Acetyltransferase (GNAT) domain BCJMU07_2649 PF18416 N-acetylglucosamine binding protein domain 2 BCJMU07_2649 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading BCJMU07_2652 PF10990 Protein of unknown function (DUF2809) BCJMU07_2654 PF04237 YjbR BCJMU07_2656 PF03772 Competence protein BCJMU07_2656 PF13567 Domain of unknown function (DUF4131) BCJMU07_2656 PF00753 Metallo-beta-lactamase superfamily BCJMU07_2666 PF13538 UvrD-like helicase C-terminal domain BCJMU07_2670 PF00270 DEAD/DEAH box helicase BCJMU07_2670 PF00271 Helicase conserved C-terminal domain BCJMU07_2670 PF00570 HRDC domain BCJMU07_2670 PF16124 RecQ zinc-binding BCJMU07_2670 PF09382 RQC domain BCJMU07_2679 PF01368 DHH family BCJMU07_2679 PF02833 DHHA2 domain BCJMU07_2680 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading BCJMU07_2680 PF18416 N-acetylglucosamine binding protein domain 2 BCJMU07_2682 PF02627 Carboxymuconolactone decarboxylase family BCJMU07_2683 PF01235 Sodium:alanine symporter family BCJMU07_2684 PF00171 Aldehyde dehydrogenase family BCJMU07_2685 PF00701 Dihydrodipicolinate synthetase family BCJMU07_2686 PF05544 Proline racemase BCJMU07_2687 PF05544 Proline racemase BCJMU07_2688 PF01266 FAD dependent oxidoreductase BCJMU07_2689 PF00158 Sigma-54 interaction domain BCJMU07_2689 PF02954 Bacterial regulatory protein, Fis family BCJMU07_2689 PF13188 PAS domain BCJMU07_2690 PF07992 Pyridine nucleotide-disulphide oxidoreductase BCJMU07_2690 PF04324 BFD-like [2Fe-2S] binding domain BCJMU07_2692 PF07992 Pyridine nucleotide-disulphide oxidoreductase BCJMU07_2692 PF04324 BFD-like [2Fe-2S] binding domain BCJMU07_2695 PF08876 Domain of unknown function (DUF1836) BCJMU07_2696 PF09335 SNARE associated Golgi protein BCJMU07_2699 PF04914 DltD protein BCJMU07_2700 PF00958 GMP synthase C terminal domain BCJMU07_2700 PF03352 Methyladenine glycosylase BCJMU07_2700 PF13302 Acetyltransferase (GNAT) domain BCJMU07_2700 PF00117 Glutamine amidotransferase class-I BCJMU07_2700 PF13673 Acetyltransferase (GNAT) domain BCJMU07_2701 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BCJMU07_2702 PF00877 NlpC/P60 family BCJMU07_2702 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain BCJMU07_2703 PF13378 Enolase C-terminal domain-like BCJMU07_2703 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BCJMU07_2707 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BCJMU07_2711 PF02129 X-Pro dipeptidyl-peptidase (S15 family) BCJMU07_2711 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain BCJMU07_2712 PF00512 His Kinase A (phospho-acceptor) domain BCJMU07_2712 PF16736 Single Cache-like BCJMU07_2712 PF00989 PAS fold BCJMU07_2712 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCJMU07_2713 PF00486 Transcriptional regulatory protein, C terminal BCJMU07_2713 PF00072 Response regulator receiver domain BCJMU07_2717 PF01048 Phosphorylase superfamily BCJMU07_2718 PF03808 Glycosyl transferase WecB/TagA/CpsF family BCJMU07_2719 PF08439 Oligopeptidase F BCJMU07_2719 PF01432 Peptidase family M3 BCJMU07_2721 PF13520 Amino acid permease BCJMU07_2722 PF01037 Lrp/AsnC ligand binding domain BCJMU07_2723 PF02645 Uncharacterised protein, DegV family COG1307 BCJMU07_2724 PF07552 Spore Coat Protein X and V domain BCJMU07_2730 PF07690 Major Facilitator Superfamily BCJMU07_2732 PF04519 Polymer-forming cytoskeletal BCJMU07_2733 PF13171 Protein of unknown function (DUF4004) BCJMU07_2734 PF12793 Sugar transport-related sRNA regulator N-term BCJMU07_2734 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BCJMU07_2735 PF07690 Major Facilitator Superfamily BCJMU07_2739 PF04226 Transglycosylase associated protein BCJMU07_2740 PF01156 Inosine-uridine preferring nucleoside hydrolase BCJMU07_2743 PF08241 Methyltransferase domain BCJMU07_2749 PF00155 Aminotransferase class I and II BCJMU07_2750 PF07977 FabA-like domain BCJMU07_2751 PF03630 Fumble BCJMU07_2752 PF03630 Fumble BCJMU07_2756 PF00005 ABC transporter BCJMU07_2765 PF01594 AI-2E family transporter BCJMU07_2767 PF00296 Luciferase-like monooxygenase BCJMU07_2768 PF00528 Binding-protein-dependent transport system inner membrane component BCJMU07_2769 PF09084 NMT1/THI5 like BCJMU07_2770 PF00005 ABC transporter BCJMU07_2772 PF00293 NUDIX domain BCJMU07_2772 PF09297 NADH pyrophosphatase zinc ribbon domain BCJMU07_2776 PF02522 Aminoglycoside 3-N-acetyltransferase BCJMU07_2781 PF13536 Putative multidrug resistance efflux transporter BCJMU07_2782 PF12867 DinB superfamily BCJMU07_2788 PF01522 Polysaccharide deacetylase BCJMU07_2790 PF03741 Integral membrane protein TerC family BCJMU07_2791 PF00884 Sulfatase BCJMU07_2792 PF12848 ABC transporter BCJMU07_2792 PF00005 ABC transporter BCJMU07_2794 PF03176 MMPL family BCJMU07_2795 PF16295 Tetracyclin repressor-like, C-terminal domain BCJMU07_2795 PF00440 Bacterial regulatory proteins, tetR family BCJMU07_2797 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BCJMU07_2798 PF01842 ACT domain BCJMU07_2798 PF02153 Prephenate dehydrogenase BCJMU07_2799 PF00155 Aminotransferase class I and II BCJMU07_2800 PF01264 Chorismate synthase BCJMU07_2801 PF01817 Chorismate mutase type II BCJMU07_2801 PF00793 DAHP synthetase I family BCJMU07_2806 PF01636 Phosphotransferase enzyme family BCJMU07_2810 PF06725 3D domain BCJMU07_2810 PF01476 LysM domain BCJMU07_2813 PF00378 Enoyl-CoA hydratase/isomerase BCJMU07_2814 PF13193 AMP-binding enzyme C-terminal domain BCJMU07_2814 PF00501 AMP-binding enzyme BCJMU07_2815 PF02954 Bacterial regulatory protein, Fis family BCJMU07_2815 PF00989 PAS fold BCJMU07_2815 PF00158 Sigma-54 interaction domain BCJMU07_2817 PF06039 Malate:quinone oxidoreductase (Mqo) BCJMU07_2818 PF13407 Periplasmic binding protein domain BCJMU07_2819 PF02653 Branched-chain amino acid transport system / permease component BCJMU07_2820 PF02653 Branched-chain amino acid transport system / permease component BCJMU07_2821 PF00005 ABC transporter BCJMU07_2822 PF00325 Bacterial regulatory proteins, crp family BCJMU07_2822 PF04198 Putative sugar-binding domain BCJMU07_2823 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BCJMU07_2823 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BCJMU07_2825 PF01791 DeoC/LacD family aldolase BCJMU07_2830 PF03992 Antibiotic biosynthesis monooxygenase BCJMU07_2834 PF07662 Na+ dependent nucleoside transporter C-terminus BCJMU07_2834 PF01773 Na+ dependent nucleoside transporter N-terminus BCJMU07_2835 PF00171 Aldehyde dehydrogenase family BCJMU07_2836 PF00696 Amino acid kinase family BCJMU07_2836 PF01472 PUA domain BCJMU07_2837 PF03807 NADP oxidoreductase coenzyme F420-dependent BCJMU07_2837 PF14748 Pyrroline-5-carboxylate reductase dimerisation BCJMU07_2838 PF01546 Peptidase family M20/M25/M40 BCJMU07_2839 PF09339 IclR helix-turn-helix domain BCJMU07_2839 PF01614 Bacterial transcriptional regulator BCJMU07_2840 PF00324 Amino acid permease BCJMU07_2843 PF00324 Amino acid permease BCJMU07_2844 PF01139 tRNA-splicing ligase RtcB BCJMU07_2845 PF00487 Fatty acid desaturase BCJMU07_2846 PF00245 Alkaline phosphatase BCJMU07_2847 PF11188 Protein of unknown function (DUF2975) BCJMU07_2848 PF13443 Cro/C1-type HTH DNA-binding domain BCJMU07_2851 PF10086 YhfC intramembrane metalloprotease BCJMU07_2853 PF04397 LytTr DNA-binding domain BCJMU07_2853 PF00072 Response regulator receiver domain BCJMU07_2858 PF13302 Acetyltransferase (GNAT) domain BCJMU07_2859 PF12681 Glyoxalase-like domain BCJMU07_2863 PF17863 AAA lid domain BCJMU07_2863 PF07726 ATPase family associated with various cellular activities (AAA) BCJMU07_2868 PF07690 Major Facilitator Superfamily BCJMU07_2870 PF00535 Glycosyl transferase family 2 BCJMU07_2873 PF00535 Glycosyl transferase family 2 BCJMU07_2875 PF00535 Glycosyl transferase family 2 BCJMU07_2877 PF00202 Aminotransferase class-III BCJMU07_2878 PF06628 Catalase-related immune-responsive BCJMU07_2878 PF00199 Catalase BCJMU07_2880 PF01979 Amidohydrolase family BCJMU07_2880 PF13382 Adenine deaminase C-terminal domain BCJMU07_2881 PF00144 Beta-lactamase BCJMU07_2886 PF00881 Nitroreductase family BCJMU07_2887 PF01047 MarR family BCJMU07_2888 PF00009 Elongation factor Tu GTP binding domain BCJMU07_2888 PF03764 Elongation factor G, domain IV BCJMU07_2888 PF00679 Elongation factor G C-terminus BCJMU07_2888 PF14492 Elongation Factor G, domain II BCJMU07_2890 PF00293 NUDIX domain BCJMU07_2893 PF00005 ABC transporter BCJMU07_2894 PF00392 Bacterial regulatory proteins, gntR family BCJMU07_2896 PF16363 GDP-mannose 4,6 dehydratase BCJMU07_2897 PF00005 ABC transporter BCJMU07_2897 PF02687 FtsX-like permease family BCJMU07_2897 PF12704 MacB-like periplasmic core domain BCJMU07_2902 PF12833 Helix-turn-helix domain BCJMU07_2903 PF00583 Acetyltransferase (GNAT) family BCJMU07_2906 PF00892 EamA-like transporter family BCJMU07_2907 PF00155 Aminotransferase class I and II BCJMU07_2907 PF00392 Bacterial regulatory proteins, gntR family BCJMU07_2909 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 BCJMU07_2910 PF13031 Protein of unknown function (DUF3892) BCJMU07_2912 PF00672 HAMP domain BCJMU07_2912 PF00512 His Kinase A (phospho-acceptor) domain BCJMU07_2913 PF00072 Response regulator receiver domain BCJMU07_2913 PF00486 Transcriptional regulatory protein, C terminal BCJMU07_2914 PF00561 alpha/beta hydrolase fold BCJMU07_2921 PF01925 Sulfite exporter TauE/SafE BCJMU07_2923 PF00324 Amino acid permease BCJMU07_2925 PF08713 DNA alkylation repair enzyme BCJMU07_2926 PF09278 MerR, DNA binding BCJMU07_2926 PF00376 MerR family regulatory protein BCJMU07_2928 PF00293 NUDIX domain BCJMU07_2929 PF04989 Cephalosporin hydroxylase BCJMU07_2930 PF10502 Signal peptidase, peptidase S26 BCJMU07_2931 PF03717 Penicillin-binding Protein dimerisation domain BCJMU07_2931 PF00905 Penicillin binding protein transpeptidase domain BCJMU07_2933 PF02146 Sir2 family BCJMU07_2934 PF01470 Pyroglutamyl peptidase BCJMU07_2939 PF03746 LamB/YcsF family BCJMU07_2940 PF02626 Carboxyltransferase domain, subdomain A and B BCJMU07_2941 PF02682 Carboxyltransferase domain, subdomain C and D BCJMU07_2942 PF09339 IclR helix-turn-helix domain BCJMU07_2942 PF01614 Bacterial transcriptional regulator BCJMU07_2943 PF10502 Signal peptidase, peptidase S26 BCJMU07_2944 PF03932 CutC family BCJMU07_2945 PF07454 Stage II sporulation protein P (SpoIIP) BCJMU07_2948 PF08028 Acyl-CoA dehydrogenase, C-terminal domain BCJMU07_2948 PF02770 Acyl-CoA dehydrogenase, middle domain BCJMU07_2948 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BCJMU07_2952 PF07670 Nucleoside recognition BCJMU07_2955 PF10903 Protein of unknown function (DUF2691) BCJMU07_2957 PF00440 Bacterial regulatory proteins, tetR family BCJMU07_2958 PF00391 PEP-utilising enzyme, mobile domain BCJMU07_2958 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain BCJMU07_2959 PF00753 Metallo-beta-lactamase superfamily BCJMU07_2962 PF07875 Coat F domain BCJMU07_2963 PF08892 YqcI/YcgG family BCJMU07_2964 PF01810 LysE type translocator BCJMU07_2965 PF00324 Amino acid permease BCJMU07_2967 PF00269 Small, acid-soluble spore proteins, alpha/beta type BCJMU07_2968 PF10710 Protein of unknown function (DUF2512) BCJMU07_2969 PF11553 Protein of unknown function (DUF3231) BCJMU07_2970 PF00269 Small, acid-soluble spore proteins, alpha/beta type BCJMU07_2971 PF00107 Zinc-binding dehydrogenase BCJMU07_2971 PF13823 Alcohol dehydrogenase GroES-associated BCJMU07_2971 PF08240 Alcohol dehydrogenase GroES-like domain BCJMU07_2973 PF00206 Lyase BCJMU07_2973 PF10415 Fumarase C C-terminus BCJMU07_2974 PF00710 Asparaginase, N-terminal BCJMU07_2974 PF17763 Glutaminase/Asparaginase C-terminal domain BCJMU07_2975 PF01381 Helix-turn-helix BCJMU07_2977 PF05504 Spore germination B3/ GerAC like, C-terminal BCJMU07_2978 PF03845 Spore germination protein BCJMU07_2979 PF03323 Bacillus/Clostridium GerA spore germination protein BCJMU07_2980 PF13188 PAS domain BCJMU07_2980 PF13426 PAS domain BCJMU07_2980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCJMU07_2980 PF00989 PAS fold BCJMU07_2980 PF00512 His Kinase A (phospho-acceptor) domain BCJMU07_2981 PF05791 Bacillus haemolytic enterotoxin (HBL) BCJMU07_2982 PF05791 Bacillus haemolytic enterotoxin (HBL) BCJMU07_2985 PF12833 Helix-turn-helix domain BCJMU07_2985 PF17853 GGDEF-like domain BCJMU07_2987 PF02151 UvrB/uvrC motif BCJMU07_2987 PF08459 UvrC Helix-hairpin-helix N-terminal BCJMU07_2987 PF12826 Helix-hairpin-helix motif BCJMU07_2987 PF01541 GIY-YIG catalytic domain BCJMU07_2988 PF13520 Amino acid permease BCJMU07_2989 PF14748 Pyrroline-5-carboxylate reductase dimerisation BCJMU07_2989 PF03807 NADP oxidoreductase coenzyme F420-dependent BCJMU07_2990 PF08664 YcbB domain BCJMU07_2990 PF00072 Response regulator receiver domain BCJMU07_2991 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCJMU07_2993 PF04960 Glutaminase BCJMU07_2995 PF01235 Sodium:alanine symporter family BCJMU07_3000 PF00144 Beta-lactamase BCJMU07_3002 PF00149 Calcineurin-like phosphoesterase BCJMU07_3002 PF17936 Bacterial Ig domain BCJMU07_3002 PF02872 5'-nucleotidase, C-terminal domain BCJMU07_3003 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) BCJMU07_3003 PF01348 Type II intron maturase BCJMU07_3005 PF03992 Antibiotic biosynthesis monooxygenase BCJMU07_3007 PF01544 CorA-like Mg2+ transporter protein BCJMU07_3010 PF11181 Heat induced stress protein YflT BCJMU07_3013 PF03073 TspO/MBR family BCJMU07_3014 PF00875 DNA photolyase BCJMU07_3014 PF03441 FAD binding domain of DNA photolyase BCJMU07_3016 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) BCJMU07_3017 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BCJMU07_3017 PF00361 Proton-conducting membrane transporter BCJMU07_3018 PF10057 Uncharacterized conserved protein (DUF2294) BCJMU07_3021 PF07726 ATPase family associated with various cellular activities (AAA) BCJMU07_3021 PF17863 AAA lid domain BCJMU07_3023 PF01040 UbiA prenyltransferase family BCJMU07_3024 PF00561 alpha/beta hydrolase fold BCJMU07_3025 PF12996 DUF based on E. rectale Gene description (DUF3880) BCJMU07_3026 PF00005 ABC transporter BCJMU07_3032 PF04397 LytTr DNA-binding domain BCJMU07_3032 PF00072 Response regulator receiver domain BCJMU07_3033 PF01297 Zinc-uptake complex component A periplasmic BCJMU07_3034 PF00950 ABC 3 transport family BCJMU07_3035 PF00005 ABC transporter BCJMU07_3039 PF01451 Low molecular weight phosphotyrosine protein phosphatase BCJMU07_3040 PF01758 Sodium Bile acid symporter family BCJMU07_3041 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BCJMU07_3042 PF01022 Bacterial regulatory protein, arsR family BCJMU07_3045 PF00012 Hsp70 protein BCJMU07_3046 PF07690 Major Facilitator Superfamily BCJMU07_3049 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BCJMU07_3051 PF00144 Beta-lactamase BCJMU07_3056 PF12802 MarR family BCJMU07_3057 PF00667 FAD binding domain BCJMU07_3057 PF00067 Cytochrome P450 BCJMU07_3057 PF00175 Oxidoreductase NAD-binding domain BCJMU07_3057 PF00258 Flavodoxin BCJMU07_3058 PF07690 Major Facilitator Superfamily BCJMU07_3063 PF00072 Response regulator receiver domain BCJMU07_3063 PF00486 Transcriptional regulatory protein, C terminal BCJMU07_3064 PF00672 HAMP domain BCJMU07_3064 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCJMU07_3064 PF00512 His Kinase A (phospho-acceptor) domain BCJMU07_3070 PF00291 Pyridoxal-phosphate dependent enzyme BCJMU07_3073 PF00144 Beta-lactamase BCJMU07_3076 PF00753 Metallo-beta-lactamase superfamily BCJMU07_3077 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family BCJMU07_3079 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BCJMU07_3079 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BCJMU07_3082 PF02073 Thermophilic metalloprotease (M29) BCJMU07_3084 PF13411 MerR HTH family regulatory protein BCJMU07_3085 PF04072 Leucine carboxyl methyltransferase BCJMU07_3088 PF00005 ABC transporter BCJMU07_3089 PF02687 FtsX-like permease family BCJMU07_3092 PF00672 HAMP domain BCJMU07_3092 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCJMU07_3092 PF00512 His Kinase A (phospho-acceptor) domain BCJMU07_3093 PF00072 Response regulator receiver domain BCJMU07_3093 PF00486 Transcriptional regulatory protein, C terminal BCJMU07_3096 PF01047 MarR family BCJMU07_3097 PF00583 Acetyltransferase (GNAT) family BCJMU07_3098 PF04299 Putative FMN-binding domain BCJMU07_3099 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BCJMU07_3099 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BCJMU07_3100 PF07690 Major Facilitator Superfamily BCJMU07_3101 PF02589 LUD domain BCJMU07_3102 PF11870 Domain of unknown function (DUF3390) BCJMU07_3102 PF13183 4Fe-4S dicluster domain BCJMU07_3102 PF02589 LUD domain BCJMU07_3103 PF02754 Cysteine-rich domain BCJMU07_3104 PF03466 LysR substrate binding domain BCJMU07_3104 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BCJMU07_3107 PF02016 LD-carboxypeptidase N-terminal domain BCJMU07_3107 PF17676 LD-carboxypeptidase C-terminal domain BCJMU07_3110 PF01842 ACT domain BCJMU07_3110 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BCJMU07_3110 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BCJMU07_3111 PF00266 Aminotransferase class-V BCJMU07_3114 PF07883 Cupin domain BCJMU07_3115 PF12833 Helix-turn-helix domain BCJMU07_3115 PF01497 Periplasmic binding protein BCJMU07_3118 PF14436 Bacterial EndoU nuclease BCJMU07_3118 PF04740 LXG domain of WXG superfamily BCJMU07_3119 PF01804 Penicillin amidase BCJMU07_3122 PF01510 N-acetylmuramoyl-L-alanine amidase BCJMU07_3122 PF01476 LysM domain BCJMU07_3122 PF01471 Putative peptidoglycan binding domain BCJMU07_3124 PF00440 Bacterial regulatory proteins, tetR family BCJMU07_3124 PF08361 MAATS-type transcriptional repressor, C-terminal region BCJMU07_3125 PF07690 Major Facilitator Superfamily BCJMU07_3132 PF14044 NETI protein BCJMU07_3133 PF07690 Major Facilitator Superfamily BCJMU07_3134 PF12697 Alpha/beta hydrolase family BCJMU07_3135 PF01047 MarR family BCJMU07_3136 PF07690 Major Facilitator Superfamily BCJMU07_3139 PF12679 ABC-2 family transporter protein BCJMU07_3140 PF00005 ABC transporter BCJMU07_3140 PF13732 Domain of unknown function (DUF4162) BCJMU07_3141 PF13396 Phospholipase_D-nuclease N-terminal BCJMU07_3143 PF17314 Family of unknown function (DUF5360) BCJMU07_3144 PF00893 Small Multidrug Resistance protein BCJMU07_3145 PF00440 Bacterial regulatory proteins, tetR family BCJMU07_3146 PF17440 Thiol-activated cytolysin beta sandwich domain BCJMU07_3146 PF01289 Thiol-activated cytolysin BCJMU07_3147 PF02667 Short chain fatty acid transporter BCJMU07_3149 PF02525 Flavodoxin-like fold BCJMU07_3153 PF14256 YwiC-like protein BCJMU07_3155 PF00005 ABC transporter BCJMU07_3156 PF02361 Cobalt transport protein BCJMU07_3159 PF03737 Aldolase/RraA BCJMU07_3160 PF03606 C4-dicarboxylate anaerobic carrier BCJMU07_3161 PF04231 Endonuclease I BCJMU07_3162 PF04073 Aminoacyl-tRNA editing domain BCJMU07_3163 PF00144 Beta-lactamase BCJMU07_3164 PF00072 Response regulator receiver domain BCJMU07_3164 PF00196 Bacterial regulatory proteins, luxR family BCJMU07_3165 PF13393 Histidyl-tRNA synthetase BCJMU07_3165 PF03129 Anticodon binding domain BCJMU07_3168 PF01638 HxlR-like helix-turn-helix BCJMU07_3169 PF00881 Nitroreductase family BCJMU07_3171 PF00391 PEP-utilising enzyme, mobile domain BCJMU07_3171 PF00224 Pyruvate kinase, barrel domain BCJMU07_3171 PF02887 Pyruvate kinase, alpha/beta domain BCJMU07_3178 PF00005 ABC transporter BCJMU07_3183 PF13419 Haloacid dehalogenase-like hydrolase BCJMU07_3184 PF12323 Helix-turn-helix domain BCJMU07_3184 PF01385 Probable transposase BCJMU07_3184 PF07282 Putative transposase DNA-binding domain BCJMU07_3188 PF13350 Tyrosine phosphatase family BCJMU07_3192 PF00293 NUDIX domain BCJMU07_3192 PF13344 Haloacid dehalogenase-like hydrolase BCJMU07_3193 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BCJMU07_3194 PF00480 ROK family BCJMU07_3195 PF12464 Maltose acetyltransferase BCJMU07_3195 PF14602 Hexapeptide repeat of succinyl-transferase BCJMU07_3197 PF12704 MacB-like periplasmic core domain BCJMU07_3197 PF02687 FtsX-like permease family BCJMU07_3197 PF00005 ABC transporter BCJMU07_3199 PF00579 tRNA synthetases class I (W and Y) BCJMU07_3201 PF01594 AI-2E family transporter BCJMU07_3205 PF08241 Methyltransferase domain BCJMU07_3207 PF07690 Major Facilitator Superfamily BCJMU07_3211 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BCJMU07_3213 PF00571 CBS domain BCJMU07_3213 PF03471 Transporter associated domain BCJMU07_3213 PF01595 Cyclin M transmembrane N-terminal domain BCJMU07_3214 PF13411 MerR HTH family regulatory protein BCJMU07_3215 PF00892 EamA-like transporter family BCJMU07_3216 PF00805 Pentapeptide repeats (8 copies) BCJMU07_3217 PF06906 Protein of unknown function (DUF1272) BCJMU07_3218 PF10282 Lactonase, 7-bladed beta-propeller BCJMU07_3219 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BCJMU07_3219 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BCJMU07_3220 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BCJMU07_3220 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BCJMU07_3221 PF02447 GntP family permease BCJMU07_3223 PF00923 Transaldolase/Fructose-6-phosphate aldolase BCJMU07_3224 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BCJMU07_3224 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain BCJMU07_3225 PF00456 Transketolase, thiamine diphosphate binding domain BCJMU07_3225 PF02779 Transketolase, pyrimidine binding domain BCJMU07_3225 PF02780 Transketolase, C-terminal domain BCJMU07_3226 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain BCJMU07_3226 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain BCJMU07_3229 PF00107 Zinc-binding dehydrogenase BCJMU07_3229 PF16197 Ketoacyl-synthetase C-terminal extension BCJMU07_3229 PF00109 Beta-ketoacyl synthase, N-terminal domain BCJMU07_3229 PF02801 Beta-ketoacyl synthase, C-terminal domain BCJMU07_3229 PF08659 KR domain BCJMU07_3229 PF00550 Phosphopantetheine attachment site BCJMU07_3229 PF14765 Polyketide synthase dehydratase BCJMU07_3229 PF00698 Acyl transferase domain BCJMU07_3229 PF08240 Alcohol dehydrogenase GroES-like domain BCJMU07_3231 PF03928 Haem-degrading BCJMU07_3234 PF01609 Transposase DDE domain BCJMU07_3239 PF03960 ArsC family BCJMU07_3241 PF00392 Bacterial regulatory proteins, gntR family BCJMU07_3241 PF07702 UTRA domain BCJMU07_3242 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BCJMU07_3242 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BCJMU07_3249 PF02567 Phenazine biosynthesis-like protein BCJMU07_3252 PF00501 AMP-binding enzyme BCJMU07_3252 PF13193 AMP-binding enzyme C-terminal domain BCJMU07_3253 PF02525 Flavodoxin-like fold BCJMU07_3254 PF01638 HxlR-like helix-turn-helix BCJMU07_3255 PF01022 Bacterial regulatory protein, arsR family BCJMU07_3256 PF01522 Polysaccharide deacetylase BCJMU07_3257 PF12791 Anti-sigma factor N-terminus BCJMU07_3258 PF04542 Sigma-70 region 2 BCJMU07_3259 PF02517 CPBP intramembrane metalloprotease BCJMU07_3260 PF00440 Bacterial regulatory proteins, tetR family BCJMU07_3264 PF05656 Protein of unknown function (DUF805) BCJMU07_3271 PF01061 ABC-2 type transporter BCJMU07_3272 PF00005 ABC transporter BCJMU07_3272 PF13732 Domain of unknown function (DUF4162) BCJMU07_3275 PF03063 Prismane/CO dehydrogenase family BCJMU07_3277 PF00753 Metallo-beta-lactamase superfamily BCJMU07_3278 PF01471 Putative peptidoglycan binding domain BCJMU07_3278 PF01183 Glycosyl hydrolases family 25 BCJMU07_3289 PF00753 Metallo-beta-lactamase superfamily BCJMU07_3292 PF03551 Transcriptional regulator PadR-like family BCJMU07_3293 PF08240 Alcohol dehydrogenase GroES-like domain BCJMU07_3293 PF00107 Zinc-binding dehydrogenase BCJMU07_3294 PF00324 Amino acid permease BCJMU07_3295 PF07690 Major Facilitator Superfamily BCJMU07_3300 PF13333 Integrase core domain BCJMU07_3300 PF00665 Integrase core domain BCJMU07_3300 PF13276 HTH-like domain BCJMU07_3303 PF02585 GlcNAc-PI de-N-acetylase BCJMU07_3304 PF08830 Protein of unknown function (DUF1806) BCJMU07_3305 PF03600 Citrate transporter BCJMU07_3308 PF01497 Periplasmic binding protein BCJMU07_3309 PF01032 FecCD transport family BCJMU07_3310 PF01032 FecCD transport family BCJMU07_3311 PF05675 Protein of unknown function (DUF817) BCJMU07_3312 PF02567 Phenazine biosynthesis-like protein BCJMU07_3313 PF13170 Protein of unknown function (DUF4003) BCJMU07_3316 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BCJMU07_3316 PF03466 LysR substrate binding domain BCJMU07_3317 PF08240 Alcohol dehydrogenase GroES-like domain BCJMU07_3317 PF00107 Zinc-binding dehydrogenase BCJMU07_3320 PF00488 MutS domain V BCJMU07_3320 PF01713 Smr domain BCJMU07_3323 PF09154 Domain of unknown function (DUF1939) BCJMU07_3323 PF00128 Alpha amylase, catalytic domain BCJMU07_3324 PF00797 N-acetyltransferase BCJMU07_3325 PF01432 Peptidase family M3 BCJMU07_3325 PF08439 Oligopeptidase F BCJMU07_3326 PF00144 Beta-lactamase BCJMU07_3328 PF07690 Major Facilitator Superfamily BCJMU07_3329 PF03466 LysR substrate binding domain BCJMU07_3329 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BCJMU07_3332 PF03009 Glycerophosphoryl diester phosphodiesterase family BCJMU07_3334 PF13538 UvrD-like helicase C-terminal domain BCJMU07_3335 PF13538 UvrD-like helicase C-terminal domain BCJMU07_3337 PF01494 FAD binding domain BCJMU07_3338 PF01022 Bacterial regulatory protein, arsR family BCJMU07_3339 PF00107 Zinc-binding dehydrogenase BCJMU07_3339 PF08240 Alcohol dehydrogenase GroES-like domain BCJMU07_3340 PF02696 Uncharacterized ACR, YdiU/UPF0061 family BCJMU07_3341 PF18801 response regulator aspartate phosphatase H, N terminal BCJMU07_3343 PF04299 Putative FMN-binding domain BCJMU07_3344 PF04229 GrpB protein BCJMU07_3346 PF01758 Sodium Bile acid symporter family BCJMU07_3347 PF01565 FAD binding domain BCJMU07_3347 PF02913 FAD linked oxidases, C-terminal domain BCJMU07_3351 PF00132 Bacterial transferase hexapeptide (six repeats) BCJMU07_3352 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BCJMU07_3353 PF00535 Glycosyl transferase family 2 BCJMU07_3354 PF00378 Enoyl-CoA hydratase/isomerase BCJMU07_3355 PF18496 Collagenase G catalytic helper subdomain BCJMU07_3355 PF01752 Collagenase BCJMU07_3355 PF08453 Peptidase family M9 N-terminal BCJMU07_3356 PF02308 MgtC family BCJMU07_3359 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BCJMU07_3360 PF04294 VanW like protein BCJMU07_3362 PF13037 Domain of unknown function (DUF3898) BCJMU07_3362 PF13039 Protein of unknown function (DUF3900) BCJMU07_3366 PF00313 'Cold-shock' DNA-binding domain BCJMU07_3368 PF00258 Flavodoxin BCJMU07_3370 PF00293 NUDIX domain BCJMU07_3372 PF00132 Bacterial transferase hexapeptide (six repeats) BCJMU07_3375 PF13333 Integrase core domain BCJMU07_3375 PF13276 HTH-like domain BCJMU07_3375 PF00665 Integrase core domain BCJMU07_3376 PF13276 HTH-like domain BCJMU07_3376 PF13333 Integrase core domain BCJMU07_3376 PF00665 Integrase core domain BCJMU07_3380 PF01551 Peptidase family M23 BCJMU07_3380 PF04225 Opacity-associated protein A LysM-like domain BCJMU07_3382 PF01183 Glycosyl hydrolases family 25 BCJMU07_3382 PF01471 Putative peptidoglycan binding domain BCJMU07_3383 PF01551 Peptidase family M23 BCJMU07_3383 PF04225 Opacity-associated protein A LysM-like domain BCJMU07_3392 PF00106 short chain dehydrogenase BCJMU07_3394 PF14698 Argininosuccinate lyase C-terminal BCJMU07_3394 PF00206 Lyase BCJMU07_3396 PF01156 Inosine-uridine preferring nucleoside hydrolase BCJMU07_3397 PF00474 Sodium:solute symporter family BCJMU07_3399 PF00171 Aldehyde dehydrogenase family BCJMU07_3407 PF00171 Aldehyde dehydrogenase family BCJMU07_3409 PF00665 Integrase core domain BCJMU07_3409 PF13276 HTH-like domain BCJMU07_3409 PF13333 Integrase core domain BCJMU07_3411 PF13249 Squalene-hopene cyclase N-terminal domain BCJMU07_3411 PF13243 Squalene-hopene cyclase C-terminal domain BCJMU07_3412 PF02681 Divergent PAP2 family BCJMU07_3413 PF00892 EamA-like transporter family BCJMU07_3414 PF06961 Protein of unknown function (DUF1294) BCJMU07_3417 PF10609 NUBPL iron-transfer P-loop NTPase BCJMU07_3419 PF02391 MoaE protein BCJMU07_3420 PF03453 MoeA N-terminal region (domain I and II) BCJMU07_3420 PF03454 MoeA C-terminal region (domain IV) BCJMU07_3420 PF00994 Probable molybdopterin binding domain BCJMU07_3421 PF00899 ThiF family BCJMU07_3422 PF01226 Formate/nitrite transporter BCJMU07_3423 PF06463 Molybdenum Cofactor Synthesis C BCJMU07_3423 PF04055 Radical SAM superfamily BCJMU07_3424 PF02634 FdhD/NarQ family BCJMU07_3425 PF02634 FdhD/NarQ family BCJMU07_3426 PF10057 Uncharacterized conserved protein (DUF2294) BCJMU07_3427 PF07849 Protein of unknown function (DUF1641) BCJMU07_3428 PF01568 Molydopterin dinucleotide binding domain BCJMU07_3428 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BCJMU07_3428 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BCJMU07_3428 PF00037 4Fe-4S binding domain BCJMU07_3428 PF00384 Molybdopterin oxidoreductase BCJMU07_3430 PF03323 Bacillus/Clostridium GerA spore germination protein BCJMU07_3439 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) BCJMU07_3439 PF01348 Type II intron maturase BCJMU07_3440 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) BCJMU07_3442 PF08241 Methyltransferase domain BCJMU07_3443 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BCJMU07_3445 PF13276 HTH-like domain BCJMU07_3445 PF13333 Integrase core domain BCJMU07_3445 PF00665 Integrase core domain BCJMU07_3446 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BCJMU07_3447 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BCJMU07_3448 PF00375 Sodium:dicarboxylate symporter family BCJMU07_3449 PF03816 Cell envelope-related transcriptional attenuator domain BCJMU07_3451 PF08281 Sigma-70, region 4 BCJMU07_3451 PF04542 Sigma-70 region 2 BCJMU07_3455 PF13732 Domain of unknown function (DUF4162) BCJMU07_3455 PF00005 ABC transporter BCJMU07_3457 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BCJMU07_3457 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BCJMU07_3458 PF00521 DNA gyrase/topoisomerase IV, subunit A BCJMU07_3458 PF03989 DNA gyrase C-terminal domain, beta-propeller BCJMU07_3459 PF00521 DNA gyrase/topoisomerase IV, subunit A BCJMU07_3459 PF03989 DNA gyrase C-terminal domain, beta-propeller BCJMU07_3460 PF01751 Toprim domain BCJMU07_3460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCJMU07_3460 PF00986 DNA gyrase B subunit, carboxyl terminus BCJMU07_3460 PF00204 DNA gyrase B BCJMU07_3461 PF13380 CoA binding domain BCJMU07_3462 PF13180 PDZ domain BCJMU07_3463 PF00486 Transcriptional regulatory protein, C terminal BCJMU07_3463 PF00072 Response regulator receiver domain BCJMU07_3464 PF04055 Radical SAM superfamily BCJMU07_3465 PF13597 Anaerobic ribonucleoside-triphosphate reductase BCJMU07_3465 PF03477 ATP cone domain BCJMU07_3466 PF02660 Glycerol-3-phosphate acyltransferase BCJMU07_3467 PF01521 Iron-sulphur cluster biosynthesis BCJMU07_3468 PF03061 Thioesterase superfamily BCJMU07_3469 PF00704 Glycosyl hydrolases family 18 BCJMU07_3469 PF01476 LysM domain BCJMU07_3471 PF08177 Small acid-soluble spore protein N family BCJMU07_3472 PF13040 Fur-regulated basic protein B BCJMU07_3473 PF11490 DNA polymerase III polC-type N-terminus II BCJMU07_3473 PF07733 Bacterial DNA polymerase III alpha NTPase domain BCJMU07_3473 PF00929 Exonuclease BCJMU07_3473 PF02811 PHP domain BCJMU07_3473 PF01336 OB-fold nucleic acid binding domain BCJMU07_3473 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BCJMU07_3473 PF14579 Helix-hairpin-helix motif BCJMU07_3474 PF00578 AhpC/TSA family BCJMU07_3476 PF00664 ABC transporter transmembrane region BCJMU07_3476 PF00005 ABC transporter BCJMU07_3477 PF00330 Aconitase family (aconitate hydratase) BCJMU07_3477 PF00694 Aconitase C-terminal domain BCJMU07_3479 PF01522 Polysaccharide deacetylase BCJMU07_3481 PF08179 Small acid-soluble spore protein P family BCJMU07_3483 PF07690 Major Facilitator Superfamily BCJMU07_3485 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BCJMU07_3485 PF01411 tRNA synthetases class II (A) BCJMU07_3485 PF02272 DHHA1 domain BCJMU07_3486 PF00293 NUDIX domain BCJMU07_3486 PF13344 Haloacid dehalogenase-like hydrolase BCJMU07_3488 PF00108 Thiolase, N-terminal domain BCJMU07_3488 PF02803 Thiolase, C-terminal domain BCJMU07_3489 PF00501 AMP-binding enzyme BCJMU07_3489 PF13193 AMP-binding enzyme C-terminal domain BCJMU07_3490 PF02632 BioY family BCJMU07_3491 PF00501 AMP-binding enzyme BCJMU07_3491 PF13193 AMP-binding enzyme C-terminal domain BCJMU07_3493 PF01381 Helix-turn-helix BCJMU07_3497 PF05532 CsbD-like BCJMU07_3503 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BCJMU07_3503 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BCJMU07_3505 PF00989 PAS fold BCJMU07_3505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCJMU07_3505 PF00512 His Kinase A (phospho-acceptor) domain BCJMU07_3505 PF13426 PAS domain BCJMU07_3505 PF13188 PAS domain BCJMU07_3506 PF01738 Dienelactone hydrolase family BCJMU07_3507 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BCJMU07_3508 PF00474 Sodium:solute symporter family BCJMU07_3509 PF01645 Conserved region in glutamate synthase BCJMU07_3510 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BCJMU07_3511 PF02559 CarD-like/TRCF domain BCJMU07_3512 PF00491 Arginase family BCJMU07_3513 PF01979 Amidohydrolase family BCJMU07_3514 PF01175 Urocanase Rossmann-like domain BCJMU07_3514 PF17392 Urocanase C-terminal domain BCJMU07_3514 PF17391 Urocanase N-terminal domain BCJMU07_3515 PF00221 Aromatic amino acid lyase BCJMU07_3516 PF09021 HutP BCJMU07_3517 PF01209 ubiE/COQ5 methyltransferase family BCJMU07_3521 PF11084 Protein of unknown function (DUF2621) BCJMU07_3524 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) BCJMU07_3524 PF01348 Type II intron maturase BCJMU07_3528 PF07301 Protein of unknown function (DUF1453) BCJMU07_3529 PF02683 Cytochrome C biogenesis protein transmembrane region BCJMU07_3531 PF07687 Peptidase dimerisation domain BCJMU07_3531 PF01546 Peptidase family M20/M25/M40 BCJMU07_3533 PF00005 ABC transporter BCJMU07_3535 PF03466 LysR substrate binding domain BCJMU07_3535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BCJMU07_3536 PF03788 LrgA family BCJMU07_3537 PF04172 LrgB-like family BCJMU07_3538 PF13344 Haloacid dehalogenase-like hydrolase BCJMU07_3538 PF00293 NUDIX domain BCJMU07_3540 PF01925 Sulfite exporter TauE/SafE BCJMU07_3542 PF01510 N-acetylmuramoyl-L-alanine amidase BCJMU07_3542 PF01471 Putative peptidoglycan binding domain BCJMU07_3547 PF00664 ABC transporter transmembrane region BCJMU07_3547 PF00005 ABC transporter BCJMU07_3548 PF00664 ABC transporter transmembrane region BCJMU07_3548 PF00005 ABC transporter BCJMU07_3549 PF01609 Transposase DDE domain BCJMU07_3550 PF03672 Uncharacterised protein family (UPF0154) BCJMU07_3551 PF10747 Sporulation inhibitor of replication protein SirA BCJMU07_3552 PF02780 Transketolase, C-terminal domain BCJMU07_3552 PF02779 Transketolase, pyrimidine binding domain BCJMU07_3552 PF00456 Transketolase, thiamine diphosphate binding domain BCJMU07_3553 PF00528 Binding-protein-dependent transport system inner membrane component BCJMU07_3554 PF00528 Binding-protein-dependent transport system inner membrane component BCJMU07_3555 PF00005 ABC transporter BCJMU07_3556 PF00497 Bacterial extracellular solute-binding proteins, family 3 BCJMU07_3557 PF02872 5'-nucleotidase, C-terminal domain BCJMU07_3557 PF00149 Calcineurin-like phosphoesterase BCJMU07_3558 PF01609 Transposase DDE domain BCJMU07_3559 PF01609 Transposase DDE domain BCJMU07_3560 PF01609 Transposase DDE domain BCJMU07_3561 PF00149 Calcineurin-like phosphoesterase BCJMU07_3561 PF02872 5'-nucleotidase, C-terminal domain BCJMU07_3562 PF05979 Bacterial protein of unknown function (DUF896) BCJMU07_3563 PF00239 Resolvase, N terminal domain BCJMU07_3564 PF01726 LexA DNA binding domain BCJMU07_3564 PF00717 Peptidase S24-like BCJMU07_3567 PF03551 Transcriptional regulator PadR-like family BCJMU07_3568 PF00005 ABC transporter BCJMU07_3568 PF00664 ABC transporter transmembrane region BCJMU07_3574 PF00733 Asparagine synthase BCJMU07_3574 PF13537 Glutamine amidotransferase domain BCJMU07_3575 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BCJMU07_3576 PF17836 PglD N-terminal domain BCJMU07_3576 PF00132 Bacterial transferase hexapeptide (six repeats) BCJMU07_3577 PF02397 Bacterial sugar transferase BCJMU07_3578 PF13229 Right handed beta helix region BCJMU07_3581 PF01501 Glycosyl transferase family 8 BCJMU07_3581 PF00535 Glycosyl transferase family 2 BCJMU07_3582 PF00534 Glycosyl transferases group 1 BCJMU07_3585 PF13439 Glycosyltransferase Family 4 BCJMU07_3585 PF00534 Glycosyl transferases group 1 BCJMU07_3587 PF13439 Glycosyltransferase Family 4 BCJMU07_3587 PF00534 Glycosyl transferases group 1 BCJMU07_3589 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase BCJMU07_3589 PF00535 Glycosyl transferase family 2 BCJMU07_3590 PF13439 Glycosyltransferase Family 4 BCJMU07_3590 PF00534 Glycosyl transferases group 1 BCJMU07_3591 PF00534 Glycosyl transferases group 1 BCJMU07_3591 PF13439 Glycosyltransferase Family 4 BCJMU07_3592 PF02719 Polysaccharide biosynthesis protein BCJMU07_3593 PF13614 AAA domain BCJMU07_3594 PF02706 Chain length determinant protein BCJMU07_3594 PF13807 G-rich domain on putative tyrosine kinase BCJMU07_3595 PF13276 HTH-like domain BCJMU07_3595 PF13333 Integrase core domain BCJMU07_3595 PF00665 Integrase core domain BCJMU07_3597 PF03951 Glutamine synthetase, beta-Grasp domain BCJMU07_3597 PF00120 Glutamine synthetase, catalytic domain BCJMU07_3598 PF13411 MerR HTH family regulatory protein BCJMU07_3599 PF06838 Methionine gamma-lyase BCJMU07_3600 PF01926 50S ribosome-binding GTPase BCJMU07_3600 PF13167 GTP-binding GTPase N-terminal BCJMU07_3600 PF16360 GTP-binding GTPase Middle Region BCJMU07_3601 PF03458 UPF0126 domain BCJMU07_3603 PF00004 ATPase family associated with various cellular activities (AAA) BCJMU07_3603 PF17866 AAA lid domain BCJMU07_3606 PF17209 Hfq protein BCJMU07_3609 PF01476 LysM domain BCJMU07_3609 PF06725 3D domain BCJMU07_3610 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BCJMU07_3610 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BCJMU07_3611 PF00294 pfkB family carbohydrate kinase BCJMU07_3612 PF08220 DeoR-like helix-turn-helix domain BCJMU07_3612 PF00455 DeoR C terminal sensor domain BCJMU07_3613 PF00465 Iron-containing alcohol dehydrogenase BCJMU07_3614 PF04238 Protein of unknown function (DUF420) BCJMU07_3616 PF00324 Amino acid permease BCJMU07_3617 PF00041 Fibronectin type III domain BCJMU07_3617 PF00704 Glycosyl hydrolases family 18 BCJMU07_3619 PF10518 TAT (twin-arginine translocation) pathway signal sequence BCJMU07_3619 PF00149 Calcineurin-like phosphoesterase BCJMU07_3620 PF01226 Formate/nitrite transporter BCJMU07_3621 PF00216 Bacterial DNA-binding protein BCJMU07_3622 PF00403 Heavy-metal-associated domain BCJMU07_3623 PF00403 Heavy-metal-associated domain BCJMU07_3624 PF02583 Metal-sensitive transcriptional repressor BCJMU07_3628 PF00756 Putative esterase BCJMU07_3629 PF00005 ABC transporter BCJMU07_3630 PF01032 FecCD transport family BCJMU07_3631 PF01032 FecCD transport family BCJMU07_3632 PF01497 Periplasmic binding protein BCJMU07_3633 PF03372 Endonuclease/Exonuclease/phosphatase family BCJMU07_3634 PF12833 Helix-turn-helix domain BCJMU07_3634 PF02805 Metal binding domain of Ada BCJMU07_3635 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BCJMU07_3635 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain BCJMU07_3636 PF00730 HhH-GPD superfamily base excision DNA repair protein BCJMU07_3636 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain BCJMU07_3637 PF07687 Peptidase dimerisation domain BCJMU07_3637 PF01546 Peptidase family M20/M25/M40 BCJMU07_3641 PF00561 alpha/beta hydrolase fold BCJMU07_3642 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BCJMU07_3643 PF00563 EAL domain BCJMU07_3643 PF00990 Diguanylate cyclase, GGDEF domain BCJMU07_3643 PF03707 Bacterial signalling protein N terminal repeat BCJMU07_3644 PF04101 Glycosyltransferase family 28 C-terminal domain BCJMU07_3644 PF03033 Glycosyltransferase family 28 N-terminal domain BCJMU07_3646 PF16363 GDP-mannose 4,6 dehydratase BCJMU07_3647 PF08485 Polysaccharide biosynthesis protein C-terminal BCJMU07_3647 PF02719 Polysaccharide biosynthesis protein BCJMU07_3648 PF02719 Polysaccharide biosynthesis protein BCJMU07_3648 PF08485 Polysaccharide biosynthesis protein C-terminal BCJMU07_3654 PF10787 Uncharacterised protein from bacillus cereus group BCJMU07_3655 PF04172 LrgB-like family BCJMU07_3656 PF00155 Aminotransferase class I and II BCJMU07_3656 PF00392 Bacterial regulatory proteins, gntR family BCJMU07_3658 PF00388 Phosphatidylinositol-specific phospholipase C, X domain BCJMU07_3659 PF00082 Subtilase family BCJMU07_3660 PF07486 Cell Wall Hydrolase BCJMU07_3662 PF00884 Sulfatase BCJMU07_3663 PF00350 Dynamin family BCJMU07_3665 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family BCJMU07_3666 PF01119 DNA mismatch repair protein, C-terminal domain BCJMU07_3666 PF08676 MutL C terminal dimerisation domain BCJMU07_3667 PF05190 MutS family domain IV BCJMU07_3667 PF05192 MutS domain III BCJMU07_3667 PF01624 MutS domain I BCJMU07_3667 PF05188 MutS domain II BCJMU07_3667 PF00488 MutS domain V BCJMU07_3668 PF10628 Outer spore coat protein E (CotE) BCJMU07_3669 PF06133 Control of competence regulator ComK, YlbF/YmcA BCJMU07_3670 PF00919 Uncharacterized protein family UPF0004 BCJMU07_3670 PF01938 TRAM domain BCJMU07_3670 PF04055 Radical SAM superfamily BCJMU07_3671 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BCJMU07_3672 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg BCJMU07_3672 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase BCJMU07_3672 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II BCJMU07_3673 PF01244 Membrane dipeptidase (Peptidase family M19) BCJMU07_3674 PF04232 Stage V sporulation protein S (SpoVS) BCJMU07_3675 PF13277 YmdB-like protein BCJMU07_3676 PF01966 HD domain BCJMU07_3676 PF00013 KH domain BCJMU07_3676 PF12072 Domain of unknown function (DUF3552) BCJMU07_3677 PF00154 recA bacterial DNA recombination protein BCJMU07_3678 PF00154 recA bacterial DNA recombination protein BCJMU07_3679 PF02464 Competence-damaged protein BCJMU07_3679 PF18146 Damage-inducible protein CinA KH domain BCJMU07_3679 PF00994 Probable molybdopterin binding domain BCJMU07_3680 PF01066 CDP-alcohol phosphatidyltransferase BCJMU07_3681 PF13464 Domain of unknown function (DUF4115) BCJMU07_3682 PF11868 Protein of unknown function (DUF3388) BCJMU07_3683 PF11588 Protein of unknown function (DUF3243) BCJMU07_3685 PF00675 Insulinase (Peptidase family M16) BCJMU07_3685 PF05193 Peptidase M16 inactive domain BCJMU07_3686 PF05193 Peptidase M16 inactive domain BCJMU07_3687 PF02653 Branched-chain amino acid transport system / permease component BCJMU07_3688 PF02653 Branched-chain amino acid transport system / permease component BCJMU07_3689 PF00005 ABC transporter BCJMU07_3690 PF02608 ABC transporter substrate-binding protein PnrA-like BCJMU07_3691 PF00392 Bacterial regulatory proteins, gntR family BCJMU07_3691 PF07702 UTRA domain BCJMU07_3692 PF17854 FtsK alpha domain BCJMU07_3692 PF09397 Ftsk gamma domain BCJMU07_3692 PF01580 FtsK/SpoIIIE family BCJMU07_3693 PF14035 YlzJ-like protein BCJMU07_3694 PF00574 Clp protease BCJMU07_3695 PF00753 Metallo-beta-lactamase superfamily BCJMU07_3695 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain BCJMU07_3695 PF17770 Ribonuclease J C-terminal domain BCJMU07_3697 PF00701 Dihydrodipicolinate synthetase family BCJMU07_3698 PF00696 Amino acid kinase family BCJMU07_3698 PF13840 ACT domain BCJMU07_3699 PF02774 Semialdehyde dehydrogenase, dimerisation domain BCJMU07_3699 PF01118 Semialdehyde dehydrogenase, NAD binding domain BCJMU07_3700 PF02441 Flavoprotein BCJMU07_3701 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BCJMU07_3701 PF16924 Dipicolinate synthase subunit A N-terminal domain BCJMU07_3702 PF05239 PRC-barrel domain BCJMU07_3703 PF00675 Insulinase (Peptidase family M16) BCJMU07_3703 PF05193 Peptidase M16 inactive domain BCJMU07_3704 PF01522 Polysaccharide deacetylase BCJMU07_3705 PF00013 KH domain BCJMU07_3705 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain BCJMU07_3705 PF01138 3' exoribonuclease family, domain 1 BCJMU07_3705 PF03725 3' exoribonuclease family, domain 2 BCJMU07_3705 PF00575 S1 RNA binding domain BCJMU07_3706 PF00312 Ribosomal protein S15 BCJMU07_3707 PF06574 FAD synthetase BCJMU07_3707 PF01687 Riboflavin kinase BCJMU07_3708 PF16198 tRNA pseudouridylate synthase B C-terminal domain BCJMU07_3708 PF01509 TruB family pseudouridylate synthase (N terminal domain) BCJMU07_3709 PF02033 Ribosome-binding factor A BCJMU07_3710 PF04456 Protein of unknown function (DUF503) BCJMU07_3711 PF11987 Translation-initiation factor 2 BCJMU07_3711 PF04760 Translation initiation factor IF-2, N-terminal region BCJMU07_3711 PF00009 Elongation factor Tu GTP binding domain BCJMU07_3712 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family BCJMU07_3713 PF04296 Protein of unknown function (DUF448) BCJMU07_3714 PF13184 NusA-like KH domain BCJMU07_3714 PF08529 NusA N-terminal domain BCJMU07_3714 PF00575 S1 RNA binding domain BCJMU07_3715 PF02576 RimP N-terminal domain BCJMU07_3715 PF17384 RimP C-terminal SH3 domain BCJMU07_3716 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BCJMU07_3716 PF14480 DNA polymerase III polC-type N-terminus I BCJMU07_3716 PF11490 DNA polymerase III polC-type N-terminus II BCJMU07_3716 PF07733 Bacterial DNA polymerase III alpha NTPase domain BCJMU07_3716 PF14579 Helix-hairpin-helix motif BCJMU07_3716 PF02811 PHP domain BCJMU07_3716 PF00929 Exonuclease BCJMU07_3717 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) BCJMU07_3717 PF01348 Type II intron maturase BCJMU07_3719 PF07733 Bacterial DNA polymerase III alpha NTPase domain BCJMU07_3719 PF11490 DNA polymerase III polC-type N-terminus II BCJMU07_3719 PF00929 Exonuclease BCJMU07_3719 PF14579 Helix-hairpin-helix motif BCJMU07_3719 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BCJMU07_3719 PF14480 DNA polymerase III polC-type N-terminus I BCJMU07_3719 PF02811 PHP domain BCJMU07_3720 PF03129 Anticodon binding domain BCJMU07_3720 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BCJMU07_3720 PF04073 Aminoacyl-tRNA editing domain BCJMU07_3721 PF17820 PDZ domain BCJMU07_3721 PF02163 Peptidase family M50 BCJMU07_3722 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain BCJMU07_3722 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase BCJMU07_3722 PF13288 DXP reductoisomerase C-terminal domain BCJMU07_3724 PF01255 Putative undecaprenyl diphosphate synthase BCJMU07_3725 PF01765 Ribosome recycling factor BCJMU07_3726 PF00696 Amino acid kinase family BCJMU07_3727 PF00889 Elongation factor TS BCJMU07_3728 PF00318 Ribosomal protein S2 BCJMU07_3730 PF00665 Integrase core domain BCJMU07_3730 PF13333 Integrase core domain BCJMU07_3730 PF13276 HTH-like domain BCJMU07_3731 PF06018 CodY GAF-like domain BCJMU07_3731 PF08222 CodY helix-turn-helix domain BCJMU07_3732 PF07724 AAA domain (Cdc48 subfamily) BCJMU07_3732 PF10431 C-terminal, D2-small domain, of ClpB protein BCJMU07_3732 PF00004 ATPase family associated with various cellular activities (AAA) BCJMU07_3733 PF00227 Proteasome subunit BCJMU07_3734 PF00589 Phage integrase family BCJMU07_3734 PF02899 Phage integrase, N-terminal SAM-like domain BCJMU07_3735 PF01134 Glucose inhibited division protein A BCJMU07_3736 PF01131 DNA topoisomerase BCJMU07_3736 PF01751 Toprim domain BCJMU07_3736 PF01396 Topoisomerase DNA binding C4 zinc finger BCJMU07_3737 PF02481 DNA recombination-mediator protein A BCJMU07_3738 PF02629 CoA binding domain BCJMU07_3738 PF00549 CoA-ligase BCJMU07_3739 PF08442 ATP-grasp domain BCJMU07_3739 PF00549 CoA-ligase BCJMU07_3740 PF01351 Ribonuclease HII BCJMU07_3741 PF01926 50S ribosome-binding GTPase BCJMU07_3742 PF10502 Signal peptidase, peptidase S26 BCJMU07_3743 PF01245 Ribosomal protein L19 BCJMU07_3744 PF01746 tRNA (Guanine-1)-methyltransferase BCJMU07_3745 PF05239 PRC-barrel domain BCJMU07_3745 PF01782 RimM N-terminal domain BCJMU07_3747 PF00886 Ribosomal protein S16 BCJMU07_3748 PF02881 SRP54-type protein, helical bundle domain BCJMU07_3748 PF02978 Signal peptide binding domain BCJMU07_3748 PF00448 SRP54-type protein, GTPase domain BCJMU07_3749 PF04297 Putative helix-turn-helix protein, YlxM / p13 like BCJMU07_3750 PF00448 SRP54-type protein, GTPase domain BCJMU07_3750 PF02881 SRP54-type protein, helical bundle domain BCJMU07_3751 PF06470 SMC proteins Flexible Hinge Domain BCJMU07_3751 PF02463 RecF/RecN/SMC N terminal domain BCJMU07_3752 PF00035 Double-stranded RNA binding motif BCJMU07_3752 PF14622 Ribonuclease-III-like BCJMU07_3753 PF00550 Phosphopantetheine attachment site BCJMU07_3755 PF00698 Acyl transferase domain BCJMU07_3756 PF02504 Fatty acid synthesis protein BCJMU07_3757 PF03061 Thioesterase superfamily BCJMU07_3758 PF00270 DEAD/DEAH box helicase BCJMU07_3758 PF17191 RecG wedge domain BCJMU07_3758 PF00271 Helicase conserved C-terminal domain BCJMU07_3759 PF13684 Dihydroxyacetone kinase family BCJMU07_3759 PF02734 DAK2 domain BCJMU07_3760 PF03780 Asp23 family, cell envelope-related function BCJMU07_3761 PF00830 Ribosomal L28 family BCJMU07_3762 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain BCJMU07_3762 PF04263 Thiamin pyrophosphokinase, catalytic domain BCJMU07_3763 PF00834 Ribulose-phosphate 3 epimerase family BCJMU07_3764 PF03193 RsgA GTPase BCJMU07_3764 PF16745 RsgA N-terminal domain BCJMU07_3765 PF00069 Protein kinase domain BCJMU07_3765 PF03793 PASTA domain BCJMU07_3767 PF04055 Radical SAM superfamily BCJMU07_3768 PF01189 16S rRNA methyltransferase RsmB/F BCJMU07_3768 PF01029 NusB family BCJMU07_3770 PF02911 Formyl transferase, C-terminal domain BCJMU07_3770 PF00551 Formyl transferase BCJMU07_3771 PF01327 Polypeptide deformylase BCJMU07_3772 PF18074 Primosomal protein N C-terminal domain BCJMU07_3772 PF18319 PriA DNA helicase Cys-rich region (CRR) domain BCJMU07_3772 PF04851 Type III restriction enzyme, res subunit BCJMU07_3772 PF17764 3′ DNA-binding domain (3′BD) BCJMU07_3772 PF00271 Helicase conserved C-terminal domain BCJMU07_3773 PF04127 DNA / pantothenate metabolism flavoprotein BCJMU07_3773 PF02441 Flavoprotein BCJMU07_3774 PF01192 RNA polymerase Rpb6 BCJMU07_3775 PF00625 Guanylate kinase BCJMU07_3776 PF04025 Domain of unknown function (DUF370) BCJMU07_3777 PF03755 YicC-like family, N-terminal region BCJMU07_3777 PF08340 Domain of unknown function (DUF1732) BCJMU07_3778 PF00690 Cation transporter/ATPase, N-terminus BCJMU07_3778 PF00689 Cation transporting ATPase, C-terminus BCJMU07_3779 PF05670 NFACT protein RNA binding domain BCJMU07_3780 PF01321 Creatinase/Prolidase N-terminal domain BCJMU07_3780 PF00557 Metallopeptidase family M24 BCJMU07_3788 PF00156 Phosphoribosyl transferase domain BCJMU07_3789 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family BCJMU07_3790 PF01180 Dihydroorotate dehydrogenase BCJMU07_3791 PF00175 Oxidoreductase NAD-binding domain BCJMU07_3791 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B BCJMU07_3792 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BCJMU07_3792 PF02142 MGS-like domain BCJMU07_3792 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BCJMU07_3793 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain BCJMU07_3793 PF00117 Glutamine amidotransferase class-I BCJMU07_3794 PF01979 Amidohydrolase family BCJMU07_3795 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BCJMU07_3795 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BCJMU07_3796 PF00860 Permease family BCJMU07_3797 PF00156 Phosphoribosyl transferase domain BCJMU07_3798 PF01479 S4 domain BCJMU07_3798 PF00849 RNA pseudouridylate synthase BCJMU07_3799 PF01252 Signal peptidase (SPase) II BCJMU07_3801 PF08264 Anticodon-binding domain of tRNA BCJMU07_3801 PF00133 tRNA synthetases class I (I, L, M and V) BCJMU07_3801 PF06827 Zinc finger found in FPG and IleRS BCJMU07_3802 PF05103 DivIVA protein BCJMU07_3803 PF17774 Putative RNA-binding domain in YlmH BCJMU07_3803 PF01479 S4 domain BCJMU07_3804 PF02325 YGGT family BCJMU07_3805 PF04472 Cell division protein SepF BCJMU07_3806 PF01168 Alanine racemase, N-terminal domain BCJMU07_3807 PF02578 Multi-copper polyphenol oxidoreductase laccase BCJMU07_3808 PF05239 PRC-barrel domain BCJMU07_3809 PF04542 Sigma-70 region 2 BCJMU07_3809 PF04545 Sigma-70, region 4 BCJMU07_3809 PF04539 Sigma-70 region 3 BCJMU07_3810 PF04545 Sigma-70, region 4 BCJMU07_3810 PF04542 Sigma-70 region 2 BCJMU07_3811 PF03419 Sporulation factor SpoIIGA BCJMU07_3812 PF12327 FtsZ family, C-terminal domain BCJMU07_3812 PF00091 Tubulin/FtsZ family, GTPase domain BCJMU07_3813 PF02491 SHS2 domain inserted in FTSA BCJMU07_3815 PF08478 POTRA domain, FtsQ-type BCJMU07_3815 PF03799 Cell division protein FtsQ BCJMU07_3816 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain BCJMU07_3816 PF01565 FAD binding domain BCJMU07_3817 PF04101 Glycosyltransferase family 28 C-terminal domain BCJMU07_3817 PF03033 Glycosyltransferase family 28 N-terminal domain BCJMU07_3818 PF01098 Cell cycle protein BCJMU07_3819 PF02875 Mur ligase family, glutamate ligase domain BCJMU07_3819 PF08245 Mur ligase middle domain BCJMU07_3820 PF00953 Glycosyl transferase family 4 BCJMU07_3820 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 BCJMU07_3821 PF01225 Mur ligase family, catalytic domain BCJMU07_3821 PF02875 Mur ligase family, glutamate ligase domain BCJMU07_3821 PF08245 Mur ligase middle domain BCJMU07_3822 PF03793 PASTA domain BCJMU07_3822 PF03717 Penicillin-binding Protein dimerisation domain BCJMU07_3822 PF00905 Penicillin binding protein transpeptidase domain BCJMU07_3823 PF03717 Penicillin-binding Protein dimerisation domain BCJMU07_3823 PF03793 PASTA domain BCJMU07_3823 PF00905 Penicillin binding protein transpeptidase domain BCJMU07_3824 PF04977 Septum formation initiator BCJMU07_3825 PF01795 MraW methylase family BCJMU07_3826 PF10079 Bacillithiol biosynthesis BshC BCJMU07_3827 PF08546 Ketopantoate reductase PanE/ApbA C terminal BCJMU07_3827 PF02558 Ketopantoate reductase PanE/ApbA BCJMU07_3828 PF00583 Acetyltransferase (GNAT) family BCJMU07_3830 PF01783 Ribosomal L32p protein family BCJMU07_3831 PF02620 Large ribosomal RNA subunit accumulation protein YceD BCJMU07_3832 PF05636 HIGH Nucleotidyl Transferase BCJMU07_3833 PF13180 PDZ domain BCJMU07_3833 PF05362 Lon protease (S16) C-terminal proteolytic domain BCJMU07_3834 PF01734 Patatin-like phospholipase BCJMU07_3835 PF07670 Nucleoside recognition BCJMU07_3836 PF01467 Cytidylyltransferase-like BCJMU07_3840 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) BCJMU07_3841 PF06133 Control of competence regulator ComK, YlbF/YmcA BCJMU07_3842 PF00300 Histidine phosphatase superfamily (branch 1) BCJMU07_3843 PF14003 YlbE-like protein BCJMU07_3844 PF14071 Putative coat protein BCJMU07_3845 PF00188 Cysteine-rich secretory protein family BCJMU07_3845 PF14504 CAP-associated N-terminal BCJMU07_3846 PF08868 YugN-like family BCJMU07_3847 PF00795 Carbon-nitrogen hydrolase BCJMU07_3848 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) BCJMU07_3848 PF01348 Type II intron maturase BCJMU07_3849 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) BCJMU07_3851 PF00795 Carbon-nitrogen hydrolase BCJMU07_3852 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) BCJMU07_3853 PF03626 Prokaryotic Cytochrome C oxidase subunit IV BCJMU07_3854 PF00510 Cytochrome c oxidase subunit III BCJMU07_3855 PF00115 Cytochrome C and Quinol oxidase polypeptide I BCJMU07_3856 PF00034 Cytochrome c BCJMU07_3856 PF00116 Cytochrome C oxidase subunit II, periplasmic domain BCJMU07_3856 PF02790 Cytochrome C oxidase subunit II, transmembrane domain BCJMU07_3857 PF01040 UbiA prenyltransferase family BCJMU07_3858 PF02628 Cytochrome oxidase assembly protein BCJMU07_3859 PF02785 Biotin carboxylase C-terminal domain BCJMU07_3859 PF00289 Biotin carboxylase, N-terminal domain BCJMU07_3859 PF00364 Biotin-requiring enzyme BCJMU07_3859 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BCJMU07_3859 PF00682 HMGL-like BCJMU07_3859 PF02436 Conserved carboxylase domain BCJMU07_3860 PF01098 Cell cycle protein BCJMU07_3861 PF07408 Protein of unknown function (DUF1507) BCJMU07_3863 PF02562 PhoH-like protein BCJMU07_3863 PF13638 PIN domain BCJMU07_3865 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) BCJMU07_3867 PF14036 YlaH-like protein BCJMU07_3868 PF00679 Elongation factor G C-terminus BCJMU07_3868 PF14492 Elongation Factor G, domain II BCJMU07_3868 PF03144 Elongation factor Tu domain 2 BCJMU07_3868 PF00009 Elongation factor Tu GTP binding domain BCJMU07_3870 PF00459 Inositol monophosphatase family BCJMU07_3872 PF06335 Protein of unknown function (DUF1054) BCJMU07_3873 PF05256 Uncharacterised protein family (UPF0223) BCJMU07_3874 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain BCJMU07_3874 PF01276 Orn/Lys/Arg decarboxylase, major domain BCJMU07_3882 PF07992 Pyridine nucleotide-disulphide oxidoreductase BCJMU07_3882 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BCJMU07_3883 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BCJMU07_3883 PF00364 Biotin-requiring enzyme BCJMU07_3883 PF02817 e3 binding domain BCJMU07_3884 PF02779 Transketolase, pyrimidine binding domain BCJMU07_3884 PF02780 Transketolase, C-terminal domain BCJMU07_3885 PF00676 Dehydrogenase E1 component BCJMU07_3887 PF01327 Polypeptide deformylase BCJMU07_3889 PF07288 Protein of unknown function (DUF1447) BCJMU07_3890 PF00753 Metallo-beta-lactamase superfamily BCJMU07_3890 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain BCJMU07_3890 PF17770 Ribonuclease J C-terminal domain BCJMU07_3891 PF02080 TrkA-C domain BCJMU07_3891 PF02254 TrkA-N domain BCJMU07_3893 PF07687 Peptidase dimerisation domain BCJMU07_3893 PF01546 Peptidase family M20/M25/M40 BCJMU07_3894 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal BCJMU07_3894 PF00132 Bacterial transferase hexapeptide (six repeats) BCJMU07_3894 PF14602 Hexapeptide repeat of succinyl-transferase BCJMU07_3895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BCJMU07_3895 PF03466 LysR substrate binding domain BCJMU07_3898 PF04308 Ribonuclease H-like BCJMU07_3900 PF08796 Protein of unknown function (DUF1797) BCJMU07_3903 PF00563 EAL domain BCJMU07_3903 PF10388 EAL-domain associated signalling protein domain BCJMU07_3905 PF00149 Calcineurin-like phosphoesterase BCJMU07_3905 PF10518 TAT (twin-arginine translocation) pathway signal sequence BCJMU07_3907 PF17941 Polyphosphate kinase C-terminal domain 1 BCJMU07_3907 PF13089 Polyphosphate kinase N-terminal domain BCJMU07_3907 PF02503 Polyphosphate kinase middle domain BCJMU07_3907 PF13090 Polyphosphate kinase C-terminal domain 2 BCJMU07_3908 PF02541 Ppx/GppA phosphatase family BCJMU07_3909 PF14177 YkyB-like protein BCJMU07_3914 PF07690 Major Facilitator Superfamily BCJMU07_3916 PF08267 Cobalamin-independent synthase, N-terminal domain BCJMU07_3916 PF01717 Cobalamin-independent synthase, Catalytic domain BCJMU07_3918 PF14040 Deoxyribonuclease NucA/NucB BCJMU07_3920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCJMU07_3920 PF00512 His Kinase A (phospho-acceptor) domain BCJMU07_3922 PF00155 Aminotransferase class I and II BCJMU07_3923 PF00356 Bacterial regulatory proteins, lacI family BCJMU07_3923 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BCJMU07_3924 PF00528 Binding-protein-dependent transport system inner membrane component BCJMU07_3925 PF00528 Binding-protein-dependent transport system inner membrane component BCJMU07_3926 PF13416 Bacterial extracellular solute-binding protein BCJMU07_3927 PF00128 Alpha amylase, catalytic domain BCJMU07_3927 PF02903 Alpha amylase, N-terminal ig-like domain BCJMU07_3927 PF16657 Maltogenic Amylase, C-terminal domain BCJMU07_3928 PF00128 Alpha amylase, catalytic domain BCJMU07_3928 PF16657 Maltogenic Amylase, C-terminal domain BCJMU07_3929 PF03459 TOBE domain BCJMU07_3929 PF17912 MalK OB fold domain BCJMU07_3929 PF00005 ABC transporter BCJMU07_3936 PF00108 Thiolase, N-terminal domain BCJMU07_3936 PF02803 Thiolase, C-terminal domain BCJMU07_3937 PF00293 NUDIX domain BCJMU07_3942 PF03551 Transcriptional regulator PadR-like family BCJMU07_3945 PF01008 Initiation factor 2 subunit family BCJMU07_3946 PF01636 Phosphotransferase enzyme family BCJMU07_3947 PF00795 Carbon-nitrogen hydrolase BCJMU07_3948 PF00155 Aminotransferase class I and II BCJMU07_3949 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain BCJMU07_3949 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain BCJMU07_3951 PF00596 Class II Aldolase and Adducin N-terminal domain BCJMU07_3952 PF03079 ARD/ARD' family BCJMU07_3955 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BCJMU07_3955 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BCJMU07_3956 PF08448 PAS fold BCJMU07_3956 PF00990 Diguanylate cyclase, GGDEF domain BCJMU07_3957 PF00881 Nitroreductase family BCJMU07_3960 PF02896 PEP-utilising enzyme, TIM barrel domain BCJMU07_3960 PF00391 PEP-utilising enzyme, mobile domain BCJMU07_3960 PF05524 PEP-utilising enzyme, N-terminal BCJMU07_3961 PF00381 PTS HPr component phosphorylation site BCJMU07_3962 PF00367 phosphotransferase system, EIIB BCJMU07_3962 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BCJMU07_3962 PF02378 Phosphotransferase system, EIIC BCJMU07_3964 PF00874 PRD domain BCJMU07_3964 PF03123 CAT RNA binding domain BCJMU07_3966 PF00392 Bacterial regulatory proteins, gntR family BCJMU07_3966 PF07702 UTRA domain BCJMU07_3967 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase BCJMU07_3968 PF01979 Amidohydrolase family BCJMU07_3971 PF13276 HTH-like domain BCJMU07_3971 PF00665 Integrase core domain BCJMU07_3971 PF13333 Integrase core domain BCJMU07_3972 PF04079 Segregation and condensation complex subunit ScpB BCJMU07_3973 PF02616 Segregation and condensation protein ScpA BCJMU07_3974 PF03745 Domain of unknown function (DUF309) BCJMU07_3975 PF00583 Acetyltransferase (GNAT) family BCJMU07_3977 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BCJMU07_3978 PF06207 Protein of unknown function (DUF1002) BCJMU07_3980 PF03323 Bacillus/Clostridium GerA spore germination protein BCJMU07_3981 PF14097 Stage V sporulation protein AE1 BCJMU07_3982 PF03862 SpoVAC/SpoVAEB sporulation membrane protein BCJMU07_3983 PF07451 Stage V sporulation protein AD (SpoVAD) BCJMU07_3984 PF03862 SpoVAC/SpoVAEB sporulation membrane protein BCJMU07_3985 PF13782 Stage V sporulation protein AB BCJMU07_3986 PF12164 Stage V sporulation protein AA BCJMU07_3987 PF00209 Sodium:neurotransmitter symporter family BCJMU07_3988 PF04542 Sigma-70 region 2 BCJMU07_3988 PF04539 Sigma-70 region 3 BCJMU07_3988 PF04545 Sigma-70, region 4 BCJMU07_3989 PF13581 Histidine kinase-like ATPase domain BCJMU07_3990 PF01740 STAS domain BCJMU07_3991 PF07943 Penicillin-binding protein 5, C-terminal domain BCJMU07_3991 PF00768 D-alanyl-D-alanine carboxypeptidase BCJMU07_3992 PF00392 Bacterial regulatory proteins, gntR family BCJMU07_3993 PF00005 ABC transporter BCJMU07_3996 PF01047 MarR family BCJMU07_3998 PF00860 Permease family BCJMU07_4001 PF13276 HTH-like domain BCJMU07_4001 PF00665 Integrase core domain BCJMU07_4001 PF13333 Integrase core domain BCJMU07_4002 PF01544 CorA-like Mg2+ transporter protein BCJMU07_4003 PF00591 Glycosyl transferase family, a/b domain BCJMU07_4003 PF02885 Glycosyl transferase family, helical bundle domain BCJMU07_4003 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain BCJMU07_4004 PF01048 Phosphorylase superfamily BCJMU07_4005 PF01676 Metalloenzyme superfamily BCJMU07_4007 PF02899 Phage integrase, N-terminal SAM-like domain BCJMU07_4007 PF00589 Phage integrase family BCJMU07_4008 PF14004 Protein of unknown function (DUF4227) BCJMU07_4009 PF01475 Ferric uptake regulator family BCJMU07_4010 PF01944 Stage II sporulation protein M BCJMU07_4012 PF00293 NUDIX domain BCJMU07_4013 PF13072 Mother cell inhibitor of FtsZ BCJMU07_4014 PF00248 Aldo/keto reductase family BCJMU07_4015 PF00248 Aldo/keto reductase family BCJMU07_4016 PF04229 GrpB protein BCJMU07_4016 PF13673 Acetyltransferase (GNAT) domain BCJMU07_4018 PF02872 5'-nucleotidase, C-terminal domain BCJMU07_4018 PF00746 LPXTG cell wall anchor motif BCJMU07_4018 PF00149 Calcineurin-like phosphoesterase BCJMU07_4018 PF00565 Staphylococcal nuclease homologue BCJMU07_4020 PF12146 Serine aminopeptidase, S33 BCJMU07_4021 PF13726 Na+-H+ antiporter family BCJMU07_4021 PF03553 Na+/H+ antiporter family BCJMU07_4022 PF00356 Bacterial regulatory proteins, lacI family BCJMU07_4023 PF00583 Acetyltransferase (GNAT) family BCJMU07_4024 PF12146 Serine aminopeptidase, S33 BCJMU07_4025 PF10827 Protein of unknown function (DUF2552) BCJMU07_4027 PF01872 RibD C-terminal domain BCJMU07_4027 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BCJMU07_4028 PF00677 Lumazine binding domain BCJMU07_4029 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase BCJMU07_4029 PF00925 GTP cyclohydrolase II BCJMU07_4030 PF00885 6,7-dimethyl-8-ribityllumazine synthase BCJMU07_4032 PF06968 Biotin and Thiamin Synthesis associated domain BCJMU07_4032 PF04055 Radical SAM superfamily BCJMU07_4033 PF13847 Methyltransferase domain BCJMU07_4034 PF12697 Alpha/beta hydrolase family BCJMU07_4034 PF08241 Methyltransferase domain BCJMU07_4035 PF00155 Aminotransferase class I and II BCJMU07_4037 PF00202 Aminotransferase class-III BCJMU07_4039 PF03553 Na+/H+ antiporter family BCJMU07_4040 PF02872 5'-nucleotidase, C-terminal domain BCJMU07_4040 PF00149 Calcineurin-like phosphoesterase BCJMU07_4042 PF13404 AsnC-type helix-turn-helix domain BCJMU07_4042 PF01037 Lrp/AsnC ligand binding domain BCJMU07_4045 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BCJMU07_4045 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BCJMU07_4046 PF00202 Aminotransferase class-III BCJMU07_4047 PF00696 Amino acid kinase family BCJMU07_4048 PF01960 ArgJ family BCJMU07_4049 PF02774 Semialdehyde dehydrogenase, dimerisation domain BCJMU07_4049 PF01118 Semialdehyde dehydrogenase, NAD binding domain BCJMU07_4051 PF00106 short chain dehydrogenase BCJMU07_4052 PF00753 Metallo-beta-lactamase superfamily BCJMU07_4053 PF14748 Pyrroline-5-carboxylate reductase dimerisation BCJMU07_4053 PF03807 NADP oxidoreductase coenzyme F420-dependent BCJMU07_4054 PF03313 Serine dehydratase alpha chain BCJMU07_4055 PF03315 Serine dehydratase beta chain BCJMU07_4055 PF01842 ACT domain BCJMU07_4057 PF12706 Beta-lactamase superfamily domain BCJMU07_4057 PF00753 Metallo-beta-lactamase superfamily BCJMU07_4059 PF11799 impB/mucB/samB family C-terminal domain BCJMU07_4059 PF11798 IMS family HHH motif BCJMU07_4059 PF00817 impB/mucB/samB family BCJMU07_4061 PF07687 Peptidase dimerisation domain BCJMU07_4061 PF01546 Peptidase family M20/M25/M40 BCJMU07_4062 PF13302 Acetyltransferase (GNAT) domain BCJMU07_4064 PF03734 L,D-transpeptidase catalytic domain BCJMU07_4065 PF06081 Aromatic acid exporter family member 1 BCJMU07_4065 PF11728 Putative aromatic acid exporter C-terminal domain BCJMU07_4066 PF00005 ABC transporter BCJMU07_4067 PF00528 Binding-protein-dependent transport system inner membrane component BCJMU07_4068 PF00497 Bacterial extracellular solute-binding proteins, family 3 BCJMU07_4069 PF06491 Disulphide isomerase BCJMU07_4070 PF11208 Protein of unknown function (DUF2992) BCJMU07_4071 PF00293 NUDIX domain BCJMU07_4071 PF09297 NADH pyrophosphatase zinc ribbon domain BCJMU07_4072 PF01098 Cell cycle protein BCJMU07_4073 PF00364 Biotin-requiring enzyme BCJMU07_4073 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BCJMU07_4073 PF02817 e3 binding domain BCJMU07_4074 PF02779 Transketolase, pyrimidine binding domain BCJMU07_4074 PF02780 Transketolase, C-terminal domain BCJMU07_4075 PF00676 Dehydrogenase E1 component BCJMU07_4076 PF07992 Pyridine nucleotide-disulphide oxidoreductase BCJMU07_4076 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BCJMU07_4077 PF00871 Acetokinase family BCJMU07_4078 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BCJMU07_4078 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BCJMU07_4079 PF01515 Phosphate acetyl/butaryl transferase BCJMU07_4080 PF02954 Bacterial regulatory protein, Fis family BCJMU07_4080 PF00989 PAS fold BCJMU07_4080 PF00158 Sigma-54 interaction domain BCJMU07_4082 PF03009 Glycerophosphoryl diester phosphodiesterase family BCJMU07_4083 PF14174 YycC-like protein BCJMU07_4085 PF00072 Response regulator receiver domain BCJMU07_4085 PF08769 Sporulation initiation factor Spo0A C terminal BCJMU07_4086 PF17820 PDZ domain BCJMU07_4086 PF05580 SpoIVB peptidase S55 BCJMU07_4087 PF13476 AAA domain BCJMU07_4088 PF01316 Arginine repressor, DNA binding domain BCJMU07_4088 PF02863 Arginine repressor, C-terminal domain BCJMU07_4089 PF01728 FtsJ-like methyltransferase BCJMU07_4089 PF01479 S4 domain BCJMU07_4090 PF13292 1-deoxy-D-xylulose-5-phosphate synthase BCJMU07_4090 PF02779 Transketolase, pyrimidine binding domain BCJMU07_4090 PF02780 Transketolase, C-terminal domain BCJMU07_4091 PF00348 Polyprenyl synthetase BCJMU07_4092 PF02609 Exonuclease VII small subunit BCJMU07_4093 PF13742 OB-fold nucleic acid binding domain BCJMU07_4093 PF02601 Exonuclease VII, large subunit BCJMU07_4094 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain BCJMU07_4094 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain BCJMU07_4095 PF01029 NusB family BCJMU07_4096 PF03780 Asp23 family, cell envelope-related function BCJMU07_4097 PF00289 Biotin carboxylase, N-terminal domain BCJMU07_4097 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BCJMU07_4097 PF02785 Biotin carboxylase C-terminal domain BCJMU07_4098 PF00364 Biotin-requiring enzyme BCJMU07_4099 PF12685 SpoIIIAH-like protein BCJMU07_4101 PF09581 Stage III sporulation protein AF (Spore_III_AF) BCJMU07_4102 PF09546 Stage III sporulation protein AE (spore_III_AE) BCJMU07_4103 PF06686 Stage III sporulation protein AC/AD protein family BCJMU07_4104 PF06686 Stage III sporulation protein AC/AD protein family BCJMU07_4105 PF09548 Stage III sporulation protein AB (spore_III_AB) BCJMU07_4110 PF09285 Elongation factor P, C-terminal BCJMU07_4110 PF08207 Elongation factor P (EF-P) KOW-like domain BCJMU07_4110 PF01132 Elongation factor P (EF-P) OB domain BCJMU07_4111 PF00557 Metallopeptidase family M24 BCJMU07_4111 PF01321 Creatinase/Prolidase N-terminal domain BCJMU07_4112 PF01220 Dehydroquinase class II BCJMU07_4113 PF11085 Conserved membrane protein YqhR BCJMU07_4114 PF07136 Protein of unknown function (DUF1385) BCJMU07_4116 PF13419 Haloacid dehalogenase-like hydrolase BCJMU07_4117 PF02742 Iron dependent repressor, metal binding and dimerisation domain BCJMU07_4117 PF01325 Iron dependent repressor, N-terminal DNA binding domain BCJMU07_4119 PF03551 Transcriptional regulator PadR-like family BCJMU07_4122 PF03099 Biotin/lipoate A/B protein ligase family BCJMU07_4123 PF00581 Rhodanese-like domain BCJMU07_4124 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BCJMU07_4124 PF00356 Bacterial regulatory proteins, lacI family BCJMU07_4126 PF00893 Small Multidrug Resistance protein BCJMU07_4127 PF00893 Small Multidrug Resistance protein BCJMU07_4135 PF00005 ABC transporter BCJMU07_4136 PF00392 Bacterial regulatory proteins, gntR family BCJMU07_4139 PF02347 Glycine cleavage system P-protein BCJMU07_4140 PF02347 Glycine cleavage system P-protein BCJMU07_4141 PF08669 Glycine cleavage T-protein C-terminal barrel domain BCJMU07_4141 PF01571 Aminomethyltransferase folate-binding domain BCJMU07_4142 PF00176 SNF2 family N-terminal domain BCJMU07_4142 PF00271 Helicase conserved C-terminal domain BCJMU07_4143 PF11079 Bacterial protein YqhG of unknown function BCJMU07_4147 PF14038 YqzE-like protein BCJMU07_4148 PF01202 Shikimate kinase BCJMU07_4153 PF07963 Prokaryotic N-terminal methylation motif BCJMU07_4155 PF00482 Type II secretion system (T2SS), protein F BCJMU07_4156 PF00437 Type II/IV secretion system protein BCJMU07_4158 PF11117 Protein of unknown function (DUF2626) BCJMU07_4159 PF00375 Sodium:dicarboxylate symporter family BCJMU07_4165 PF04101 Glycosyltransferase family 28 C-terminal domain BCJMU07_4165 PF03033 Glycosyltransferase family 28 N-terminal domain BCJMU07_4166 PF00809 Pterin binding enzyme BCJMU07_4166 PF02574 Homocysteine S-methyltransferase BCJMU07_4166 PF02607 B12 binding domain BCJMU07_4166 PF02310 B12 binding domain BCJMU07_4166 PF02965 Vitamin B12 dependent methionine synthase, activation domain BCJMU07_4167 PF02219 Methylenetetrahydrofolate reductase BCJMU07_4167 PF02574 Homocysteine S-methyltransferase BCJMU07_4168 PF01053 Cys/Met metabolism PLP-dependent enzyme BCJMU07_4169 PF01053 Cys/Met metabolism PLP-dependent enzyme BCJMU07_4171 PF01022 Bacterial regulatory protein, arsR family BCJMU07_4173 PF00753 Metallo-beta-lactamase superfamily BCJMU07_4174 PF10958 Protein of unknown function (DUF2759) BCJMU07_4175 PF00480 ROK family BCJMU07_4176 PF06014 Bacterial protein of unknown function (DUF910) BCJMU07_4177 PF01812 5-formyltetrahydrofolate cyclo-ligase family BCJMU07_4178 PF00471 Ribosomal protein L33 BCJMU07_4179 PF00483 Nucleotidyl transferase BCJMU07_4180 PF01895 PhoU domain BCJMU07_4181 PF00005 ABC transporter BCJMU07_4182 PF00528 Binding-protein-dependent transport system inner membrane component BCJMU07_4183 PF00528 Binding-protein-dependent transport system inner membrane component BCJMU07_4184 PF12849 PBP superfamily domain BCJMU07_4185 PF03717 Penicillin-binding Protein dimerisation domain BCJMU07_4185 PF00905 Penicillin binding protein transpeptidase domain BCJMU07_4186 PF07690 Major Facilitator Superfamily BCJMU07_4187 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BCJMU07_4187 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BCJMU07_4190 PF04551 GcpE protein BCJMU07_4191 PF01475 Ferric uptake regulator family BCJMU07_4192 PF00950 ABC 3 transport family BCJMU07_4193 PF00005 ABC transporter BCJMU07_4194 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BCJMU07_4194 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BCJMU07_4195 PF11116 Protein of unknown function (DUF2624) BCJMU07_4196 PF01261 Xylose isomerase-like TIM barrel BCJMU07_4197 PF00270 DEAD/DEAH box helicase BCJMU07_4197 PF00271 Helicase conserved C-terminal domain BCJMU07_4199 PF02401 LytB protein BCJMU07_4200 PF01784 NIF3 (NGG1p interacting factor 3) BCJMU07_4201 PF04816 tRNA (adenine(22)-N(1))-methyltransferase BCJMU07_4202 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BCJMU07_4203 PF03979 Sigma-70 factor, region 1.1 BCJMU07_4203 PF00140 Sigma-70 factor, region 1.2 BCJMU07_4203 PF04542 Sigma-70 region 2 BCJMU07_4203 PF04539 Sigma-70 region 3 BCJMU07_4203 PF04545 Sigma-70, region 4 BCJMU07_4204 PF01807 CHC2 zinc finger BCJMU07_4204 PF08275 DNA primase catalytic core, N-terminal domain BCJMU07_4204 PF10410 DnaB-helicase binding domain of primase BCJMU07_4205 PF03618 Kinase/pyrophosphorylase BCJMU07_4206 PF08279 HTH domain BCJMU07_4206 PF00571 CBS domain BCJMU07_4207 PF11967 Recombination protein O N terminal BCJMU07_4207 PF02565 Recombination protein O C terminal BCJMU07_4209 PF01926 50S ribosome-binding GTPase BCJMU07_4209 PF07650 KH domain BCJMU07_4210 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BCJMU07_4211 PF01219 Prokaryotic diacylglycerol kinase BCJMU07_4212 PF02130 Uncharacterized protein family UPF0054 BCJMU07_4213 PF01966 HD domain BCJMU07_4213 PF07698 7TM receptor with intracellular HD hydrolase BCJMU07_4213 PF07697 7TM-HD extracellular BCJMU07_4214 PF02562 PhoH-like protein BCJMU07_4215 PF06898 Putative stage IV sporulation protein YqfD BCJMU07_4216 PF07873 YabP family BCJMU07_4217 PF09424 Yqey-like protein BCJMU07_4218 PF01165 Ribosomal protein S21 BCJMU07_4219 PF00919 Uncharacterized protein family UPF0004 BCJMU07_4219 PF01938 TRAM domain BCJMU07_4219 PF04055 Radical SAM superfamily BCJMU07_4220 PF04452 RNA methyltransferase BCJMU07_4222 PF00226 DnaJ domain BCJMU07_4222 PF01556 DnaJ C terminal domain BCJMU07_4222 PF00684 DnaJ central domain BCJMU07_4223 PF00012 Hsp70 protein BCJMU07_4224 PF01025 GrpE BCJMU07_4225 PF01628 HrcA protein C terminal domain BCJMU07_4226 PF06969 HemN C-terminal domain BCJMU07_4226 PF04055 Radical SAM superfamily BCJMU07_4227 PF01638 HxlR-like helix-turn-helix BCJMU07_4228 PF06421 GTP-binding protein LepA C-terminus BCJMU07_4228 PF03144 Elongation factor Tu domain 2 BCJMU07_4228 PF00009 Elongation factor Tu GTP binding domain BCJMU07_4228 PF00679 Elongation factor G C-terminus BCJMU07_4230 PF03418 Germination protease BCJMU07_4231 PF01649 Ribosomal protein S20 BCJMU07_4232 PF06144 DNA polymerase III, delta subunit BCJMU07_4233 PF14141 YqzM-like protein BCJMU07_4234 PF00753 Metallo-beta-lactamase superfamily BCJMU07_4234 PF03772 Competence protein BCJMU07_4234 PF13567 Domain of unknown function (DUF4131) BCJMU07_4235 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BCJMU07_4236 PF10531 SLBB domain BCJMU07_4237 PF14748 Pyrroline-5-carboxylate reductase dimerisation BCJMU07_4237 PF03807 NADP oxidoreductase coenzyme F420-dependent BCJMU07_4238 PF13649 Methyltransferase domain BCJMU07_4240 PF01966 HD domain BCJMU07_4241 PF01467 Cytidylyltransferase-like BCJMU07_4242 PF01985 CRS1 / YhbY (CRM) domain BCJMU07_4243 PF08501 Shikimate dehydrogenase substrate binding domain BCJMU07_4243 PF01488 Shikimate / quinate 5-dehydrogenase BCJMU07_4243 PF18317 Shikimate 5'-dehydrogenase C-terminal domain BCJMU07_4244 PF01926 50S ribosome-binding GTPase BCJMU07_4248 PF02666 Phosphatidylserine decarboxylase BCJMU07_4249 PF04542 Sigma-70 region 2 BCJMU07_4249 PF04545 Sigma-70, region 4 BCJMU07_4250 PF00717 Peptidase S24-like BCJMU07_4250 PF01726 LexA DNA binding domain BCJMU07_4252 PF08239 Bacterial SH3 domain BCJMU07_4252 PF01520 N-acetylmuramoyl-L-alanine amidase BCJMU07_4253 PF04688 SPP1 phage holin BCJMU07_4270 PF03354 Phage Terminase BCJMU07_4276 PF00589 Phage integrase family BCJMU07_4291 PF00692 dUTPase BCJMU07_4296 PF00772 DnaB-like helicase N terminal domain BCJMU07_4296 PF03796 DnaB-like helicase C terminal domain BCJMU07_4305 PF01381 Helix-turn-helix BCJMU07_4312 PF04542 Sigma-70 region 2 BCJMU07_4312 PF04545 Sigma-70, region 4 BCJMU07_4315 PF16244 Domain of unknown function (DUF4901) BCJMU07_4316 PF00471 Ribosomal protein L33 BCJMU07_4317 PF00881 Nitroreductase family BCJMU07_4318 PF04607 Region found in RelA / SpoT proteins BCJMU07_4320 PF00245 Alkaline phosphatase BCJMU07_4322 PF00561 alpha/beta hydrolase fold BCJMU07_4322 PF08386 TAP-like protein BCJMU07_4329 PF13276 HTH-like domain BCJMU07_4329 PF00665 Integrase core domain BCJMU07_4329 PF13333 Integrase core domain BCJMU07_4331 PF00082 Subtilase family BCJMU07_4331 PF13860 FlgD Ig-like domain BCJMU07_4331 PF02225 PA domain BCJMU07_4331 PF05922 Peptidase inhibitor I9 BCJMU07_4332 PF00351 Biopterin-dependent aromatic amino acid hydroxylase BCJMU07_4334 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BCJMU07_4335 PF07681 DoxX BCJMU07_4341 PF00005 ABC transporter BCJMU07_4342 PF01032 FecCD transport family BCJMU07_4343 PF01497 Periplasmic binding protein BCJMU07_4344 PF14143 YrhC-like protein BCJMU07_4345 PF00171 Aldehyde dehydrogenase family BCJMU07_4345 PF00465 Iron-containing alcohol dehydrogenase BCJMU07_4346 PF01053 Cys/Met metabolism PLP-dependent enzyme BCJMU07_4347 PF00291 Pyridoxal-phosphate dependent enzyme BCJMU07_4348 PF01048 Phosphorylase superfamily BCJMU07_4349 PF08241 Methyltransferase domain BCJMU07_4352 PF00905 Penicillin binding protein transpeptidase domain BCJMU07_4352 PF03717 Penicillin-binding Protein dimerisation domain BCJMU07_4353 PF03449 Transcription elongation factor, N-terminal BCJMU07_4353 PF01272 Transcription elongation factor, GreA/GreB, C-term BCJMU07_4354 PF00485 Phosphoribulokinase / Uridine kinase family BCJMU07_4355 PF01136 Peptidase family U32 BCJMU07_4355 PF16325 Peptidase family U32 C-terminal domain BCJMU07_4356 PF01136 Peptidase family U32 BCJMU07_4357 PF01596 O-methyltransferase BCJMU07_4358 PF02618 YceG-like family BCJMU07_4359 PF06949 Protein of unknown function (DUF1292) BCJMU07_4360 PF03652 Holliday junction resolvase BCJMU07_4361 PF06135 IreB regulatory phosphoprotein BCJMU07_4362 PF02272 DHHA1 domain BCJMU07_4362 PF01411 tRNA synthetases class II (A) BCJMU07_4362 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BCJMU07_4364 PF01594 AI-2E family transporter BCJMU07_4368 PF13538 UvrD-like helicase C-terminal domain BCJMU07_4368 PF14490 Helix-hairpin-helix containing domain BCJMU07_4368 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain BCJMU07_4371 PF00266 Aminotransferase class-V BCJMU07_4372 PF02082 Transcriptional regulator BCJMU07_4373 PF16193 AAA C-terminal domain BCJMU07_4373 PF12002 MgsA AAA+ ATPase C terminal BCJMU07_4373 PF05496 Holliday junction DNA helicase RuvB P-loop domain BCJMU07_4375 PF00899 ThiF family BCJMU07_4376 PF02938 GAD domain BCJMU07_4376 PF00152 tRNA synthetases class II (D, K and N) BCJMU07_4376 PF01336 OB-fold nucleic acid binding domain BCJMU07_4377 PF03129 Anticodon binding domain BCJMU07_4377 PF13393 Histidyl-tRNA synthetase BCJMU07_4379 PF02580 D-Tyr-tRNA(Tyr) deacylase BCJMU07_4380 PF02824 TGS domain BCJMU07_4380 PF04607 Region found in RelA / SpoT proteins BCJMU07_4380 PF13291 ACT domain BCJMU07_4381 PF00156 Phosphoribosyl transferase domain BCJMU07_4382 PF01368 DHH family BCJMU07_4382 PF02272 DHHA1 domain BCJMU07_4382 PF17768 RecJ OB domain BCJMU07_4382 PF10141 Single-strand DNA-specific exonuclease, C terminal domain BCJMU07_4383 PF16916 Dimerisation domain of Zinc Transporter BCJMU07_4383 PF01545 Cation efflux family BCJMU07_4384 PF02355 Protein export membrane protein BCJMU07_4384 PF07549 SecD/SecF GG Motif BCJMU07_4385 PF13797 Post-transcriptional regulator BCJMU07_4386 PF14667 Polysaccharide biosynthesis C-terminal domain BCJMU07_4386 PF01943 Polysaccharide biosynthesis protein BCJMU07_4387 PF04239 Protein of unknown function (DUF421) BCJMU07_4389 PF02699 Preprotein translocase subunit BCJMU07_4390 PF01702 Queuine tRNA-ribosyltransferase BCJMU07_4391 PF02547 Queuosine biosynthesis protein BCJMU07_4392 PF11146 Protein of unknown function (DUF2905) BCJMU07_4393 PF17864 RuvB AAA lid domain BCJMU07_4393 PF05496 Holliday junction DNA helicase RuvB P-loop domain BCJMU07_4393 PF05491 RuvB C-terminal winged helix domain BCJMU07_4394 PF07499 RuvA, C-terminal domain BCJMU07_4394 PF01330 RuvA N terminal domain BCJMU07_4395 PF01497 Periplasmic binding protein BCJMU07_4397 PF00892 EamA-like transporter family BCJMU07_4398 PF01022 Bacterial regulatory protein, arsR family BCJMU07_4402 PF01476 LysM domain BCJMU07_4403 PF02445 Quinolinate synthetase A protein BCJMU07_4404 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain BCJMU07_4404 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain BCJMU07_4405 PF00890 FAD binding domain BCJMU07_4405 PF02910 Fumarate reductase flavoprotein C-term BCJMU07_4406 PF00266 Aminotransferase class-V BCJMU07_4407 PF02829 3H domain BCJMU07_4407 PF08279 HTH domain BCJMU07_4408 PF03475 3-alpha domain BCJMU07_4408 PF03473 MOSC domain BCJMU07_4409 PF00800 Prephenate dehydratase BCJMU07_4409 PF01842 ACT domain BCJMU07_4410 PF02687 FtsX-like permease family BCJMU07_4411 PF02687 FtsX-like permease family BCJMU07_4412 PF00005 ABC transporter BCJMU07_4413 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCJMU07_4414 PF00486 Transcriptional regulatory protein, C terminal BCJMU07_4414 PF00072 Response regulator receiver domain BCJMU07_4415 PF01018 GTP1/OBG BCJMU07_4415 PF01926 50S ribosome-binding GTPase BCJMU07_4415 PF09269 Domain of unknown function (DUF1967) BCJMU07_4416 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain BCJMU07_4416 PF14682 Sporulation initiation phospho-transferase B, C-terminal BCJMU07_4417 PF01016 Ribosomal L27 protein BCJMU07_4418 PF04327 Cysteine protease Prp BCJMU07_4419 PF00829 Ribosomal prokaryotic L21 protein BCJMU07_4420 PF10150 Ribonuclease E/G family BCJMU07_4420 PF00575 S1 RNA binding domain BCJMU07_4421 PF02163 Peptidase family M50 BCJMU07_4422 PF01551 Peptidase family M23 BCJMU07_4423 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BCJMU07_4424 PF03775 Septum formation inhibitor MinC, C-terminal domain BCJMU07_4426 PF04085 rod shape-determining protein MreC BCJMU07_4437 PF00664 ABC transporter transmembrane region BCJMU07_4437 PF00005 ABC transporter BCJMU07_4437 PF03412 Peptidase C39 family BCJMU07_4445 PF02875 Mur ligase family, glutamate ligase domain BCJMU07_4445 PF08245 Mur ligase middle domain BCJMU07_4446 PF10458 Valyl tRNA synthetase tRNA binding arm BCJMU07_4446 PF08264 Anticodon-binding domain of tRNA BCJMU07_4446 PF00133 tRNA synthetases class I (I, L, M and V) BCJMU07_4448 PF01476 LysM domain BCJMU07_4449 PF00202 Aminotransferase class-III BCJMU07_4450 PF00490 Delta-aminolevulinic acid dehydratase BCJMU07_4451 PF02602 Uroporphyrinogen-III synthase HemD BCJMU07_4452 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain BCJMU07_4452 PF03900 Porphobilinogen deaminase, C-terminal domain BCJMU07_4453 PF01578 Cytochrome C assembly protein BCJMU07_4454 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain BCJMU07_4454 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain BCJMU07_4454 PF01488 Shikimate / quinate 5-dehydrogenase BCJMU07_4455 PF01047 MarR family BCJMU07_4456 PF02566 OsmC-like protein BCJMU07_4457 PF01926 50S ribosome-binding GTPase BCJMU07_4458 PF00004 ATPase family associated with various cellular activities (AAA) BCJMU07_4458 PF05362 Lon protease (S16) C-terminal proteolytic domain BCJMU07_4458 PF02190 ATP-dependent protease La (LON) substrate-binding domain BCJMU07_4459 PF00004 ATPase family associated with various cellular activities (AAA) BCJMU07_4459 PF05362 Lon protease (S16) C-terminal proteolytic domain BCJMU07_4460 PF06689 ClpX C4-type zinc finger BCJMU07_4460 PF07724 AAA domain (Cdc48 subfamily) BCJMU07_4460 PF10431 C-terminal, D2-small domain, of ClpB protein BCJMU07_4461 PF05697 Bacterial trigger factor protein (TF) BCJMU07_4461 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BCJMU07_4461 PF05698 Bacterial trigger factor protein (TF) C-terminus BCJMU07_4465 PF08000 Bacterial PH domain BCJMU07_4465 PF11724 YvbH-like oligomerisation region BCJMU07_4467 PF12850 Calcineurin-like phosphoesterase superfamily domain BCJMU07_4468 PF01725 Ham1 family BCJMU07_4469 PF03725 3' exoribonuclease family, domain 2 BCJMU07_4469 PF01138 3' exoribonuclease family, domain 1 BCJMU07_4470 PF10646 Sporulation and spore germination BCJMU07_4471 PF01177 Asp/Glu/Hydantoin racemase BCJMU07_4472 PF07690 Major Facilitator Superfamily BCJMU07_4474 PF00440 Bacterial regulatory proteins, tetR family BCJMU07_4475 PF01965 DJ-1/PfpI family BCJMU07_4498 PF00196 Bacterial regulatory proteins, luxR family BCJMU07_4499 PF00860 Permease family BCJMU07_4500 PF07969 Amidohydrolase family BCJMU07_4501 PF04024 PspC domain BCJMU07_4502 PF07883 Cupin domain BCJMU07_4502 PF01381 Helix-turn-helix BCJMU07_4503 PF13536 Putative multidrug resistance efflux transporter BCJMU07_4504 PF00230 Major intrinsic protein BCJMU07_4506 PF02082 Transcriptional regulator BCJMU07_4508 PF00005 ABC transporter BCJMU07_4508 PF13732 Domain of unknown function (DUF4162) BCJMU07_4509 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) BCJMU07_4510 PF13677 Membrane MotB of proton-channel complex MotA/MotB BCJMU07_4510 PF00691 OmpA family BCJMU07_4511 PF01618 MotA/TolQ/ExbB proton channel family BCJMU07_4512 PF02557 D-alanyl-D-alanine carboxypeptidase BCJMU07_4513 PF03061 Thioesterase superfamily BCJMU07_4514 PF13085 2Fe-2S iron-sulfur cluster binding domain BCJMU07_4514 PF13183 4Fe-4S dicluster domain BCJMU07_4515 PF02910 Fumarate reductase flavoprotein C-term BCJMU07_4515 PF00890 FAD binding domain BCJMU07_4516 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit BCJMU07_4517 PF10702 Protein of unknown function (DUF2507) BCJMU07_4518 PF01541 GIY-YIG catalytic domain BCJMU07_4518 PF02151 UvrB/uvrC motif BCJMU07_4518 PF08459 UvrC Helix-hairpin-helix N-terminal BCJMU07_4519 PF00085 Thioredoxin BCJMU07_4520 PF00766 Electron transfer flavoprotein FAD-binding domain BCJMU07_4520 PF01012 Electron transfer flavoprotein domain BCJMU07_4521 PF01012 Electron transfer flavoprotein domain BCJMU07_4522 PF00378 Enoyl-CoA hydratase/isomerase BCJMU07_4523 PF08359 YsiA-like protein, C-terminal region BCJMU07_4523 PF00440 Bacterial regulatory proteins, tetR family BCJMU07_4524 PF00501 AMP-binding enzyme BCJMU07_4524 PF13193 AMP-binding enzyme C-terminal domain BCJMU07_4526 PF01497 Periplasmic binding protein BCJMU07_4527 PF01032 FecCD transport family BCJMU07_4528 PF05163 DinB family BCJMU07_4533 PF00005 ABC transporter BCJMU07_4534 PF00512 His Kinase A (phospho-acceptor) domain BCJMU07_4534 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCJMU07_4535 PF00486 Transcriptional regulatory protein, C terminal BCJMU07_4535 PF00072 Response regulator receiver domain BCJMU07_4537 PF09962 Uncharacterized conserved protein (DUF2196) BCJMU07_4538 PF10672 S-adenosylmethionine-dependent methyltransferase BCJMU07_4538 PF17785 PUA-like domain BCJMU07_4540 PF03992 Antibiotic biosynthesis monooxygenase BCJMU07_4541 PF04203 Sortase domain BCJMU07_4542 PF00005 ABC transporter BCJMU07_4543 PF01032 FecCD transport family BCJMU07_4544 PF01497 Periplasmic binding protein BCJMU07_4545 PF05031 Iron Transport-associated domain BCJMU07_4546 PF05031 Iron Transport-associated domain BCJMU07_4548 PF05525 Branched-chain amino acid transport protein BCJMU07_4549 PF01479 S4 domain BCJMU07_4549 PF00849 RNA pseudouridylate synthase BCJMU07_4550 PF00488 MutS domain V BCJMU07_4550 PF01713 Smr domain BCJMU07_4551 PF14716 Helix-hairpin-helix domain BCJMU07_4551 PF02811 PHP domain BCJMU07_4551 PF14791 DNA polymerase beta thumb BCJMU07_4552 PF02674 Colicin V production protein BCJMU07_4553 PF05164 Cell division protein ZapA BCJMU07_4554 PF01351 Ribonuclease HII BCJMU07_4554 PF11858 Domain of unknown function (DUF3378) BCJMU07_4557 PF01336 OB-fold nucleic acid binding domain BCJMU07_4557 PF00152 tRNA synthetases class II (D, K and N) BCJMU07_4558 PF03147 Ferredoxin-fold anticodon binding domain BCJMU07_4558 PF03483 B3/4 domain BCJMU07_4558 PF03484 tRNA synthetase B5 domain BCJMU07_4558 PF01588 Putative tRNA binding domain BCJMU07_4558 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain BCJMU07_4559 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain BCJMU07_4559 PF01409 tRNA synthetases class II core domain (F) BCJMU07_4560 PF08032 RNA 2'-O ribose methyltransferase substrate binding BCJMU07_4560 PF00588 SpoU rRNA Methylase family BCJMU07_4561 PF14098 Small, acid-soluble spore protein I BCJMU07_4562 PF01966 HD domain BCJMU07_4565 PF07690 Major Facilitator Superfamily BCJMU07_4567 PF16859 Tetracyclin repressor-like, C-terminal domain BCJMU07_4567 PF00440 Bacterial regulatory proteins, tetR family BCJMU07_4568 PF05343 M42 glutamyl aminopeptidase BCJMU07_4570 PF00453 Ribosomal protein L20 BCJMU07_4571 PF01632 Ribosomal protein L35 BCJMU07_4572 PF00707 Translation initiation factor IF-3, C-terminal domain BCJMU07_4572 PF05198 Translation initiation factor IF-3, N-terminal domain BCJMU07_4573 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BCJMU07_4573 PF02824 TGS domain BCJMU07_4573 PF03129 Anticodon binding domain BCJMU07_4573 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BCJMU07_4574 PF08812 YtxC-like family BCJMU07_4575 PF07319 Primosomal protein DnaI N-terminus BCJMU07_4575 PF01695 IstB-like ATP binding protein BCJMU07_4576 PF07261 Replication initiation and membrane attachment BCJMU07_4577 PF03477 ATP cone domain BCJMU07_4578 PF02675 S-adenosylmethionine decarboxylase BCJMU07_4579 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BCJMU07_4579 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BCJMU07_4580 PF01121 Dephospho-CoA kinase BCJMU07_4581 PF02659 Putative manganese efflux pump BCJMU07_4582 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain BCJMU07_4582 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain BCJMU07_4582 PF06827 Zinc finger found in FPG and IleRS BCJMU07_4583 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BCJMU07_4583 PF00476 DNA polymerase family A BCJMU07_4583 PF01367 5'-3' exonuclease, C-terminal SAM fold BCJMU07_4584 PF16736 Single Cache-like BCJMU07_4584 PF00989 PAS fold BCJMU07_4584 PF00512 His Kinase A (phospho-acceptor) domain BCJMU07_4584 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCJMU07_4585 PF00486 Transcriptional regulatory protein, C terminal BCJMU07_4585 PF00072 Response regulator receiver domain BCJMU07_4589 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BCJMU07_4589 PF00056 lactate/malate dehydrogenase, NAD binding domain BCJMU07_4590 PF00180 Isocitrate/isopropylmalate dehydrogenase BCJMU07_4591 PF00285 Citrate synthase, C-terminal domain BCJMU07_4592 PF04284 Protein of unknown function (DUF441) BCJMU07_4593 PF01594 AI-2E family transporter BCJMU07_4594 PF04186 FxsA cytoplasmic membrane protein BCJMU07_4595 PF00391 PEP-utilising enzyme, mobile domain BCJMU07_4595 PF00224 Pyruvate kinase, barrel domain BCJMU07_4595 PF02887 Pyruvate kinase, alpha/beta domain BCJMU07_4596 PF00365 Phosphofructokinase BCJMU07_4597 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit BCJMU07_4598 PF01039 Carboxyl transferase domain BCJMU07_4598 PF17848 Acetyl-coA carboxylase zinc finger domain BCJMU07_4599 PF00392 Bacterial regulatory proteins, gntR family BCJMU07_4600 PF00390 Malic enzyme, N-terminal domain BCJMU07_4600 PF03949 Malic enzyme, NAD binding domain BCJMU07_4601 PF14579 Helix-hairpin-helix motif BCJMU07_4601 PF01336 OB-fold nucleic acid binding domain BCJMU07_4601 PF02811 PHP domain BCJMU07_4601 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BCJMU07_4601 PF07733 Bacterial DNA polymerase III alpha NTPase domain BCJMU07_4602 PF14034 Sporulation protein YtrH BCJMU07_4604 PF02272 DHHA1 domain BCJMU07_4604 PF01368 DHH family BCJMU07_4605 PF14007 YtpI-like protein BCJMU07_4608 PF03061 Thioesterase superfamily BCJMU07_4608 PF00571 CBS domain BCJMU07_4608 PF07085 DRTGG domain BCJMU07_4608 PF00392 Bacterial regulatory proteins, gntR family BCJMU07_4611 PF01321 Creatinase/Prolidase N-terminal domain BCJMU07_4611 PF00557 Metallopeptidase family M24 BCJMU07_4619 PF07883 Cupin domain BCJMU07_4621 PF01381 Helix-turn-helix BCJMU07_4623 PF05222 Alanine dehydrogenase/PNT, N-terminal domain BCJMU07_4623 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BCJMU07_4625 PF00582 Universal stress protein family BCJMU07_4628 PF13276 HTH-like domain BCJMU07_4628 PF00665 Integrase core domain BCJMU07_4628 PF13333 Integrase core domain BCJMU07_4632 PF14698 Argininosuccinate lyase C-terminal BCJMU07_4632 PF00206 Lyase BCJMU07_4633 PF00764 Arginosuccinate synthase BCJMU07_4636 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BCJMU07_4636 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BCJMU07_4637 PF12787 EcsC protein family BCJMU07_4639 PF00871 Acetokinase family BCJMU07_4640 PF02384 N-6 DNA Methylase BCJMU07_4641 PF08534 Redoxin BCJMU07_4642 PF09579 Sporulation protein YtfJ (Spore_YtfJ) BCJMU07_4644 PF01513 ATP-NAD kinase BCJMU07_4645 PF07969 Amidohydrolase family BCJMU07_4647 PF13193 AMP-binding enzyme C-terminal domain BCJMU07_4647 PF00501 AMP-binding enzyme BCJMU07_4648 PF00269 Small, acid-soluble spore proteins, alpha/beta type BCJMU07_4649 PF02926 THUMP domain BCJMU07_4649 PF02568 Thiamine biosynthesis protein (ThiI) BCJMU07_4650 PF00266 Aminotransferase class-V BCJMU07_4651 PF06160 Septation ring formation regulator, EzrA BCJMU07_4652 PF03466 LysR substrate binding domain BCJMU07_4652 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BCJMU07_4653 PF00892 EamA-like transporter family BCJMU07_4654 PF00440 Bacterial regulatory proteins, tetR family BCJMU07_4655 PF13185 GAF domain BCJMU07_4656 PF01053 Cys/Met metabolism PLP-dependent enzyme BCJMU07_4657 PF01479 S4 domain BCJMU07_4657 PF00163 Ribosomal protein S4/S9 N-terminal domain BCJMU07_4667 PF00579 tRNA synthetases class I (W and Y) BCJMU07_4667 PF01479 S4 domain BCJMU07_4669 PF04542 Sigma-70 region 2 BCJMU07_4669 PF08281 Sigma-70, region 4 BCJMU07_4671 PF13193 AMP-binding enzyme C-terminal domain BCJMU07_4671 PF00501 AMP-binding enzyme BCJMU07_4672 PF00583 Acetyltransferase (GNAT) family BCJMU07_4673 PF00571 CBS domain BCJMU07_4674 PF00850 Histone deacetylase domain BCJMU07_4677 PF00072 Response regulator receiver domain BCJMU07_4677 PF00486 Transcriptional regulatory protein, C terminal BCJMU07_4678 PF00672 HAMP domain BCJMU07_4678 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCJMU07_4678 PF00512 His Kinase A (phospho-acceptor) domain BCJMU07_4678 PF13426 PAS domain BCJMU07_4679 PF12796 Ankyrin repeats (3 copies) BCJMU07_4680 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BCJMU07_4681 PF01741 Large-conductance mechanosensitive channel, MscL BCJMU07_4686 PF00356 Bacterial regulatory proteins, lacI family BCJMU07_4687 PF07537 CamS sex pheromone cAM373 precursor BCJMU07_4688 PF11009 Protein of unknown function (DUF2847) BCJMU07_4690 PF02073 Thermophilic metalloprotease (M29) BCJMU07_4693 PF02687 FtsX-like permease family BCJMU07_4694 PF00005 ABC transporter BCJMU07_4697 PF13302 Acetyltransferase (GNAT) domain BCJMU07_4698 PF03551 Transcriptional regulator PadR-like family BCJMU07_4700 PF02875 Mur ligase family, glutamate ligase domain BCJMU07_4700 PF08245 Mur ligase middle domain BCJMU07_4700 PF01225 Mur ligase family, catalytic domain BCJMU07_4702 PF17854 FtsK alpha domain BCJMU07_4702 PF09397 Ftsk gamma domain BCJMU07_4702 PF01580 FtsK/SpoIIIE family BCJMU07_4704 PF14794 Domain of unknown function (DUF4479) BCJMU07_4704 PF01588 Putative tRNA binding domain BCJMU07_4705 PF07285 Protein of unknown function (DUF1444) BCJMU07_4706 PF00085 Thioredoxin BCJMU07_4707 PF01931 Protein of unknown function DUF84 BCJMU07_4708 PF05343 M42 glutamyl aminopeptidase BCJMU07_4710 PF00753 Metallo-beta-lactamase superfamily BCJMU07_4711 PF02390 Putative methyltransferase BCJMU07_4712 PF14165 YtzH-like protein BCJMU07_4713 PF01636 Phosphotransferase enzyme family BCJMU07_4714 PF17999 Pullulanase N1-terminal domain BCJMU07_4714 PF00128 Alpha amylase, catalytic domain BCJMU07_4714 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BCJMU07_4715 PF02834 LigT like Phosphoesterase BCJMU07_4716 PF01546 Peptidase family M20/M25/M40 BCJMU07_4717 PF08220 DeoR-like helix-turn-helix domain BCJMU07_4718 PF01479 S4 domain BCJMU07_4718 PF00849 RNA pseudouridylate synthase BCJMU07_4719 PF01943 Polysaccharide biosynthesis protein BCJMU07_4719 PF14667 Polysaccharide biosynthesis C-terminal domain BCJMU07_4721 PF07690 Major Facilitator Superfamily BCJMU07_4722 PF01022 Bacterial regulatory protein, arsR family BCJMU07_4723 PF08327 Activator of Hsp90 ATPase homolog 1-like protein BCJMU07_4725 PF10957 Sporulation protein Cse60 BCJMU07_4727 PF02559 CarD-like/TRCF domain BCJMU07_4729 PF06800 Sugar transport protein BCJMU07_4732 PF02391 MoaE protein BCJMU07_4733 PF03205 Molybdopterin guanine dinucleotide synthesis protein B BCJMU07_4734 PF03454 MoeA C-terminal region (domain IV) BCJMU07_4734 PF03453 MoeA N-terminal region (domain I and II) BCJMU07_4734 PF00994 Probable molybdopterin binding domain BCJMU07_4735 PF01967 MoaC family BCJMU07_4736 PF00899 ThiF family BCJMU07_4737 PF04055 Radical SAM superfamily BCJMU07_4737 PF06463 Molybdenum Cofactor Synthesis C BCJMU07_4741 PF00581 Rhodanese-like domain BCJMU07_4743 PF00561 alpha/beta hydrolase fold BCJMU07_4744 PF03323 Bacillus/Clostridium GerA spore germination protein BCJMU07_4745 PF03845 Spore germination protein BCJMU07_4751 PF08264 Anticodon-binding domain of tRNA BCJMU07_4751 PF00133 tRNA synthetases class I (I, L, M and V) BCJMU07_4751 PF09334 tRNA synthetases class I (M) BCJMU07_4751 PF13603 Leucyl-tRNA synthetase, Domain 2 BCJMU07_4752 PF07690 Major Facilitator Superfamily BCJMU07_4753 PF00999 Sodium/hydrogen exchanger family BCJMU07_4754 PF02080 TrkA-C domain BCJMU07_4755 PF00589 Phage integrase family BCJMU07_4757 PF00005 ABC transporter BCJMU07_4759 PF04235 Protein of unknown function (DUF418) BCJMU07_4759 PF07786 Protein of unknown function (DUF1624) BCJMU07_4762 PF04055 Radical SAM superfamily BCJMU07_4762 PF16199 Radical_SAM C-terminal domain BCJMU07_4763 PF06962 Putative rRNA methylase BCJMU07_4764 PF00005 ABC transporter BCJMU07_4766 PF01177 Asp/Glu/Hydantoin racemase BCJMU07_4768 PF10776 Protein of unknown function (DUF2600) BCJMU07_4769 PF12146 Serine aminopeptidase, S33 BCJMU07_4770 PF00132 Bacterial transferase hexapeptide (six repeats) BCJMU07_4771 PF01569 PAP2 superfamily BCJMU07_4772 PF13439 Glycosyltransferase Family 4 BCJMU07_4772 PF00534 Glycosyl transferases group 1 BCJMU07_4773 PF12804 MobA-like NTP transferase domain BCJMU07_4774 PF00994 Probable molybdopterin binding domain BCJMU07_4778 PF02773 S-adenosylmethionine synthetase, C-terminal domain BCJMU07_4778 PF02772 S-adenosylmethionine synthetase, central domain BCJMU07_4778 PF00438 S-adenosylmethionine synthetase, N-terminal domain BCJMU07_4779 PF01293 Phosphoenolpyruvate carboxykinase BCJMU07_4787 PF13419 Haloacid dehalogenase-like hydrolase BCJMU07_4788 PF08220 DeoR-like helix-turn-helix domain BCJMU07_4788 PF00455 DeoR C terminal sensor domain BCJMU07_4789 PF13419 Haloacid dehalogenase-like hydrolase BCJMU07_4790 PF13426 PAS domain BCJMU07_4790 PF00512 His Kinase A (phospho-acceptor) domain BCJMU07_4790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCJMU07_4790 PF00989 PAS fold BCJMU07_4790 PF13188 PAS domain BCJMU07_4791 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCJMU07_4791 PF00512 His Kinase A (phospho-acceptor) domain BCJMU07_4791 PF08447 PAS fold BCJMU07_4791 PF00989 PAS fold BCJMU07_4793 PF08386 TAP-like protein BCJMU07_4793 PF00561 alpha/beta hydrolase fold BCJMU07_4794 PF00884 Sulfatase BCJMU07_4798 PF00005 ABC transporter BCJMU07_4799 PF00528 Binding-protein-dependent transport system inner membrane component BCJMU07_4802 PF13419 Haloacid dehalogenase-like hydrolase BCJMU07_4804 PF00293 NUDIX domain BCJMU07_4810 PF02664 S-Ribosylhomocysteinase (LuxS) BCJMU07_4811 PF01809 Putative membrane protein insertion efficiency factor BCJMU07_4812 PF00484 Carbonic anhydrase BCJMU07_4813 PF01654 Cytochrome bd terminal oxidase subunit I BCJMU07_4814 PF02322 Cytochrome bd terminal oxidase subunit II BCJMU07_4815 PF10676 Spore germination protein gerPA/gerPF BCJMU07_4818 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BCJMU07_4818 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BCJMU07_4823 PF04012 PspA/IM30 family BCJMU07_4829 PF00082 Subtilase family BCJMU07_4829 PF05922 Peptidase inhibitor I9 BCJMU07_4834 PF07670 Nucleoside recognition BCJMU07_4834 PF17910 FeoB cytosolic helical domain BCJMU07_4834 PF07664 Ferrous iron transport protein B C terminus BCJMU07_4834 PF02421 Ferrous iron transport protein B BCJMU07_4836 PF09515 Thiamine transporter protein (Thia_YuaJ) BCJMU07_4837 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCJMU07_4837 PF00672 HAMP domain BCJMU07_4837 PF00512 His Kinase A (phospho-acceptor) domain BCJMU07_4838 PF00486 Transcriptional regulatory protein, C terminal BCJMU07_4838 PF00072 Response regulator receiver domain BCJMU07_4843 PF00156 Phosphoribosyl transferase domain BCJMU07_4845 PF00781 Diacylglycerol kinase catalytic domain BCJMU07_4847 PF07282 Putative transposase DNA-binding domain BCJMU07_4847 PF12323 Helix-turn-helix domain BCJMU07_4847 PF01385 Probable transposase BCJMU07_4852 PF09335 SNARE associated Golgi protein BCJMU07_4853 PF00398 Ribosomal RNA adenine dimethylase BCJMU07_4854 PF02687 FtsX-like permease family BCJMU07_4855 PF00005 ABC transporter BCJMU07_4856 PF06445 GyrI-like small molecule binding domain BCJMU07_4856 PF12833 Helix-turn-helix domain BCJMU07_4857 PF00486 Transcriptional regulatory protein, C terminal BCJMU07_4857 PF00072 Response regulator receiver domain BCJMU07_4858 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCJMU07_4859 PF02687 FtsX-like permease family BCJMU07_4860 PF02687 FtsX-like permease family BCJMU07_4861 PF00005 ABC transporter BCJMU07_4862 PF02687 FtsX-like permease family BCJMU07_4864 PF02447 GntP family permease BCJMU07_4865 PF07702 UTRA domain BCJMU07_4865 PF00392 Bacterial regulatory proteins, gntR family BCJMU07_4867 PF07071 KDGP aldolase BCJMU07_4868 PF03841 L-seryl-tRNA selenium transferase BCJMU07_4869 PF01979 Amidohydrolase family BCJMU07_4870 PF02557 D-alanyl-D-alanine carboxypeptidase BCJMU07_4871 PF00512 His Kinase A (phospho-acceptor) domain BCJMU07_4871 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCJMU07_4872 PF00486 Transcriptional regulatory protein, C terminal BCJMU07_4872 PF00072 Response regulator receiver domain BCJMU07_4873 PF13378 Enolase C-terminal domain-like BCJMU07_4873 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BCJMU07_4874 PF00501 AMP-binding enzyme BCJMU07_4874 PF13193 AMP-binding enzyme C-terminal domain BCJMU07_4875 PF00378 Enoyl-CoA hydratase/isomerase BCJMU07_4876 PF00561 alpha/beta hydrolase fold BCJMU07_4877 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BCJMU07_4877 PF16582 Middle domain of thiamine pyrophosphate BCJMU07_4877 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BCJMU07_4878 PF00425 chorismate binding enzyme BCJMU07_4879 PF01040 UbiA prenyltransferase family BCJMU07_4880 PF01258 Prokaryotic dksA/traR C4-type zinc finger BCJMU07_4881 PF00313 'Cold-shock' DNA-binding domain BCJMU07_4884 PF00343 Carbohydrate phosphorylase BCJMU07_4885 PF00534 Glycosyl transferases group 1 BCJMU07_4885 PF08323 Starch synthase catalytic domain BCJMU07_4886 PF00483 Nucleotidyl transferase BCJMU07_4887 PF00483 Nucleotidyl transferase BCJMU07_4888 PF00128 Alpha amylase, catalytic domain BCJMU07_4888 PF02806 Alpha amylase, C-terminal all-beta domain BCJMU07_4888 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BCJMU07_4890 PF05922 Peptidase inhibitor I9 BCJMU07_4890 PF13860 FlgD Ig-like domain BCJMU07_4890 PF02225 PA domain BCJMU07_4890 PF00082 Subtilase family BCJMU07_4891 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BCJMU07_4891 PF00056 lactate/malate dehydrogenase, NAD binding domain BCJMU07_4892 PF02308 MgtC family BCJMU07_4893 PF07885 Ion channel BCJMU07_4893 PF02254 TrkA-N domain BCJMU07_4894 PF08868 YugN-like family BCJMU07_4895 PF00342 Phosphoglucose isomerase BCJMU07_4896 PF04070 Domain of unknown function (DUF378) BCJMU07_4897 PF00575 S1 RNA binding domain BCJMU07_4898 PF00155 Aminotransferase class I and II BCJMU07_4899 PF01037 Lrp/AsnC ligand binding domain BCJMU07_4900 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BCJMU07_4900 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BCJMU07_4901 PF08386 TAP-like protein BCJMU07_4901 PF00561 alpha/beta hydrolase fold BCJMU07_4903 PF00155 Aminotransferase class I and II BCJMU07_4906 PF08810 Kinase associated protein B BCJMU07_4907 PF00929 Exonuclease BCJMU07_4908 PF03600 Citrate transporter BCJMU07_4911 PF03129 Anticodon binding domain BCJMU07_4911 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BCJMU07_4912 PF03061 Thioesterase superfamily BCJMU07_4914 PF02632 BioY family BCJMU07_4915 PF00483 Nucleotidyl transferase BCJMU07_4916 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BCJMU07_4916 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BCJMU07_4916 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BCJMU07_4916 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BCJMU07_4917 PF02457 DisA bacterial checkpoint controller nucleotide-binding BCJMU07_4917 PF10372 Bacterial membrane-spanning protein N-terminus BCJMU07_4918 PF00883 Cytosol aminopeptidase family, catalytic domain BCJMU07_4918 PF02789 Cytosol aminopeptidase family, N-terminal domain BCJMU07_4919 PF06725 3D domain BCJMU07_4921 PF13344 Haloacid dehalogenase-like hydrolase BCJMU07_4921 PF00293 NUDIX domain BCJMU07_4922 PF07992 Pyridine nucleotide-disulphide oxidoreductase BCJMU07_4923 PF07992 Pyridine nucleotide-disulphide oxidoreductase BCJMU07_4925 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) BCJMU07_4928 PF06445 GyrI-like small molecule binding domain BCJMU07_4931 PF04463 Protein of unknown function (DUF523) BCJMU07_4933 PF01521 Iron-sulphur cluster biosynthesis BCJMU07_4934 PF01678 Diaminopimelate epimerase BCJMU07_4935 PF07293 Protein of unknown function (DUF1450) BCJMU07_4936 PF07992 Pyridine nucleotide-disulphide oxidoreductase BCJMU07_4937 PF00664 ABC transporter transmembrane region BCJMU07_4937 PF00005 ABC transporter BCJMU07_4937 PF03412 Peptidase C39 family BCJMU07_4938 PF03649 Uncharacterised protein family (UPF0014) BCJMU07_4939 PF03831 PhnA domain BCJMU07_4939 PF08274 PhnA Zinc-Ribbon BCJMU07_4942 PF01909 Nucleotidyltransferase domain BCJMU07_4942 PF13427 Domain of unknown function (DUF4111) BCJMU07_4943 PF07315 Protein of unknown function (DUF1462) BCJMU07_4944 PF01106 NifU-like domain BCJMU07_4948 PF04608 Phosphatidylglycerophosphatase A BCJMU07_4951 PF00005 ABC transporter BCJMU07_4951 PF02687 FtsX-like permease family BCJMU07_4951 PF12704 MacB-like periplasmic core domain BCJMU07_4952 PF02525 Flavodoxin-like fold BCJMU07_4953 PF13344 Haloacid dehalogenase-like hydrolase BCJMU07_4955 PF01934 Protein of unknown function DUF86 BCJMU07_4956 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded BCJMU07_4959 PF06265 Protein of unknown function (DUF1027) BCJMU07_4960 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) BCJMU07_4961 PF13411 MerR HTH family regulatory protein BCJMU07_4961 PF07739 TipAS antibiotic-recognition domain BCJMU07_4962 PF10086 YhfC intramembrane metalloprotease BCJMU07_4966 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family BCJMU07_4966 PF04055 Radical SAM superfamily BCJMU07_4967 PF01551 Peptidase family M23 BCJMU07_4969 PF08827 Domain of unknown function (DUF1805) BCJMU07_4970 PF02872 5'-nucleotidase, C-terminal domain BCJMU07_4971 PF03551 Transcriptional regulator PadR-like family BCJMU07_4972 PF04892 VanZ like family BCJMU07_4973 PF01458 Uncharacterized protein family (UPF0051) BCJMU07_4974 PF01592 NifU-like N terminal domain BCJMU07_4975 PF00266 Aminotransferase class-V BCJMU07_4976 PF01458 Uncharacterized protein family (UPF0051) BCJMU07_4977 PF00005 ABC transporter BCJMU07_4978 PF03180 NLPA lipoprotein BCJMU07_4979 PF03180 NLPA lipoprotein BCJMU07_4980 PF00528 Binding-protein-dependent transport system inner membrane component BCJMU07_4981 PF00005 ABC transporter BCJMU07_4981 PF09383 NIL domain BCJMU07_4983 PF00085 Thioredoxin BCJMU07_4984 PF01751 Toprim domain BCJMU07_4985 PF01597 Glycine cleavage H-protein BCJMU07_4986 PF03960 ArsC family BCJMU07_4995 PF00056 lactate/malate dehydrogenase, NAD binding domain BCJMU07_4995 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BCJMU07_5000 PF13305 Tetracyclin repressor-like, C-terminal domain BCJMU07_5000 PF00440 Bacterial regulatory proteins, tetR family BCJMU07_5001 PF00753 Metallo-beta-lactamase superfamily BCJMU07_5005 PF00005 ABC transporter BCJMU07_5013 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BCJMU07_5013 PF02770 Acyl-CoA dehydrogenase, middle domain BCJMU07_5013 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BCJMU07_5014 PF02803 Thiolase, C-terminal domain BCJMU07_5014 PF00108 Thiolase, N-terminal domain BCJMU07_5015 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BCJMU07_5015 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BCJMU07_5015 PF00378 Enoyl-CoA hydratase/isomerase BCJMU07_5016 PF14115 YuzL-like protein BCJMU07_5017 PF00768 D-alanyl-D-alanine carboxypeptidase BCJMU07_5017 PF07943 Penicillin-binding protein 5, C-terminal domain BCJMU07_5018 PF01619 Proline dehydrogenase BCJMU07_5019 PF10835 Protein of unknown function (DUF2573) BCJMU07_5020 PF01910 Thiamine-binding protein BCJMU07_5021 PF00672 HAMP domain BCJMU07_5021 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BCJMU07_5021 PF02743 Cache domain BCJMU07_5025 PF07690 Major Facilitator Superfamily BCJMU07_5026 PF13520 Amino acid permease BCJMU07_5029 PF13333 Integrase core domain BCJMU07_5029 PF00665 Integrase core domain BCJMU07_5029 PF13276 HTH-like domain BCJMU07_5031 PF02096 60Kd inner membrane protein BCJMU07_5033 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BCJMU07_5033 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BCJMU07_5040 PF09335 SNARE associated Golgi protein BCJMU07_5042 PF17969 L,D-transpeptidase C-terminal domain BCJMU07_5042 PF03734 L,D-transpeptidase catalytic domain BCJMU07_5043 PF00072 Response regulator receiver domain BCJMU07_5043 PF00486 Transcriptional regulatory protein, C terminal BCJMU07_5044 PF16736 Single Cache-like BCJMU07_5044 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCJMU07_5044 PF00512 His Kinase A (phospho-acceptor) domain BCJMU07_5044 PF00989 PAS fold BCJMU07_5046 PF08264 Anticodon-binding domain of tRNA BCJMU07_5046 PF09334 tRNA synthetases class I (M) BCJMU07_5048 PF00672 HAMP domain BCJMU07_5048 PF02743 Cache domain BCJMU07_5048 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BCJMU07_5049 PF02743 Cache domain BCJMU07_5049 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BCJMU07_5049 PF00672 HAMP domain BCJMU07_5050 PF01883 Iron-sulfur cluster assembly protein BCJMU07_5051 PF07504 Fungalysin/Thermolysin Propeptide Motif BCJMU07_5051 PF03413 Peptidase propeptide and YPEB domain BCJMU07_5051 PF01447 Thermolysin metallopeptidase, catalytic domain BCJMU07_5051 PF02868 Thermolysin metallopeptidase, alpha-helical domain BCJMU07_5052 PF02678 Pirin BCJMU07_5052 PF17954 Quercetinase C-terminal cupin domain BCJMU07_5053 PF01047 MarR family BCJMU07_5055 PF00999 Sodium/hydrogen exchanger family BCJMU07_5056 PF02080 TrkA-C domain BCJMU07_5058 PF01235 Sodium:alanine symporter family BCJMU07_5059 PF00210 Ferritin-like domain BCJMU07_5062 PF03641 Possible lysine decarboxylase BCJMU07_5064 PF00210 Ferritin-like domain BCJMU07_5066 PF01773 Na+ dependent nucleoside transporter N-terminus BCJMU07_5066 PF07662 Na+ dependent nucleoside transporter C-terminus BCJMU07_5067 PF07662 Na+ dependent nucleoside transporter C-terminus BCJMU07_5067 PF01773 Na+ dependent nucleoside transporter N-terminus BCJMU07_5068 PF01235 Sodium:alanine symporter family BCJMU07_5069 PF01235 Sodium:alanine symporter family BCJMU07_5070 PF13460 NAD(P)H-binding BCJMU07_5073 PF00248 Aldo/keto reductase family BCJMU07_5074 PF07690 Major Facilitator Superfamily BCJMU07_5075 PF01638 HxlR-like helix-turn-helix BCJMU07_5076 PF07849 Protein of unknown function (DUF1641) BCJMU07_5077 PF07992 Pyridine nucleotide-disulphide oxidoreductase BCJMU07_5079 PF00579 tRNA synthetases class I (W and Y) BCJMU07_5079 PF01479 S4 domain BCJMU07_5080 PF01565 FAD binding domain BCJMU07_5080 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain BCJMU07_5082 PF17202 Single cache domain 3 BCJMU07_5082 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BCJMU07_5082 PF00672 HAMP domain BCJMU07_5084 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BCJMU07_5085 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BCJMU07_5088 PF07690 Major Facilitator Superfamily BCJMU07_5089 PF00005 ABC transporter BCJMU07_5089 PF12848 ABC transporter BCJMU07_5090 PF13302 Acetyltransferase (GNAT) domain BCJMU07_5092 PF07690 Major Facilitator Superfamily BCJMU07_5093 PF07457 Protein of unknown function (DUF1516) BCJMU07_5094 PF06146 Phosphate-starvation-inducible E BCJMU07_5096 PF00005 ABC transporter BCJMU07_5097 PF01032 FecCD transport family BCJMU07_5098 PF01032 FecCD transport family BCJMU07_5100 PF00486 Transcriptional regulatory protein, C terminal BCJMU07_5100 PF00072 Response regulator receiver domain BCJMU07_5101 PF01668 SmpB protein BCJMU07_5102 PF17876 Cold shock domain BCJMU07_5102 PF08206 Ribonuclease B OB domain BCJMU07_5102 PF00773 RNB domain BCJMU07_5102 PF00575 S1 RNA binding domain BCJMU07_5103 PF12146 Serine aminopeptidase, S33 BCJMU07_5104 PF03840 Preprotein translocase SecG subunit BCJMU07_5105 PF04172 LrgB-like family BCJMU07_5106 PF03788 LrgA family BCJMU07_5107 PF01156 Inosine-uridine preferring nucleoside hydrolase BCJMU07_5108 PF03952 Enolase, N-terminal domain BCJMU07_5108 PF00113 Enolase, C-terminal TIM barrel domain BCJMU07_5109 PF01676 Metalloenzyme superfamily BCJMU07_5109 PF06415 BPG-independent PGAM N-terminus (iPGM_N) BCJMU07_5110 PF00121 Triosephosphate isomerase BCJMU07_5111 PF00162 Phosphoglycerate kinase BCJMU07_5112 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BCJMU07_5112 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BCJMU07_5113 PF04198 Putative sugar-binding domain BCJMU07_5115 PF04963 Sigma-54 factor, core binding domain BCJMU07_5115 PF04552 Sigma-54, DNA binding domain BCJMU07_5115 PF00309 Sigma-54 factor, Activator interacting domain (AID) BCJMU07_5118 PF14436 Bacterial EndoU nuclease BCJMU07_5118 PF04740 LXG domain of WXG superfamily BCJMU07_5119 PF18801 response regulator aspartate phosphatase H, N terminal BCJMU07_5125 PF03862 SpoVAC/SpoVAEB sporulation membrane protein BCJMU07_5126 PF07451 Stage V sporulation protein AD (SpoVAD) BCJMU07_5127 PF03862 SpoVAC/SpoVAEB sporulation membrane protein BCJMU07_5129 PF04239 Protein of unknown function (DUF421) BCJMU07_5130 PF00574 Clp protease BCJMU07_5131 PF00381 PTS HPr component phosphorylation site BCJMU07_5132 PF02650 WhiA C-terminal HTH domain BCJMU07_5132 PF14527 WhiA LAGLIDADG-like domain BCJMU07_5132 PF10298 WhiA N-terminal LAGLIDADG-like domain BCJMU07_5133 PF01933 Uncharacterised protein family UPF0052 BCJMU07_5134 PF03668 P-loop ATPase protein family BCJMU07_5135 PF00293 NUDIX domain BCJMU07_5137 PF07992 Pyridine nucleotide-disulphide oxidoreductase BCJMU07_5139 PF14602 Hexapeptide repeat of succinyl-transferase BCJMU07_5140 PF13419 Haloacid dehalogenase-like hydrolase BCJMU07_5141 PF01790 Prolipoprotein diacylglyceryl transferase BCJMU07_5142 PF07475 HPr Serine kinase C-terminal domain BCJMU07_5142 PF02603 HPr Serine kinase N terminus BCJMU07_5143 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV BCJMU07_5145 PF00005 ABC transporter BCJMU07_5145 PF17755 UvrA DNA-binding domain BCJMU07_5145 PF17760 UvrA interaction domain BCJMU07_5146 PF00271 Helicase conserved C-terminal domain BCJMU07_5146 PF04851 Type III restriction enzyme, res subunit BCJMU07_5146 PF02151 UvrB/uvrC motif BCJMU07_5146 PF12344 Ultra-violet resistance protein B BCJMU07_5146 PF17757 UvrB interaction domain BCJMU07_5149 PF07739 TipAS antibiotic-recognition domain BCJMU07_5149 PF13411 MerR HTH family regulatory protein BCJMU07_5153 PF03601 Conserved hypothetical protein 698 BCJMU07_5154 PF03466 LysR substrate binding domain BCJMU07_5154 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BCJMU07_5155 PF13411 MerR HTH family regulatory protein BCJMU07_5156 PF03358 NADPH-dependent FMN reductase BCJMU07_5157 PF12848 ABC transporter BCJMU07_5157 PF16326 ABC transporter C-terminal domain BCJMU07_5157 PF00005 ABC transporter BCJMU07_5160 PF13276 HTH-like domain BCJMU07_5160 PF00665 Integrase core domain BCJMU07_5160 PF13333 Integrase core domain BCJMU07_5161 PF01906 Putative heavy-metal-binding BCJMU07_5162 PF00664 ABC transporter transmembrane region BCJMU07_5162 PF00005 ABC transporter BCJMU07_5164 PF17820 PDZ domain BCJMU07_5165 PF17820 PDZ domain BCJMU07_5165 PF01471 Putative peptidoglycan binding domain BCJMU07_5165 PF03572 Peptidase family S41 BCJMU07_5166 PF02687 FtsX-like permease family BCJMU07_5166 PF18075 FtsX extracellular domain BCJMU07_5167 PF00005 ABC transporter BCJMU07_5168 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BCJMU07_5169 PF03462 PCRF domain BCJMU07_5169 PF00472 RF-1 domain BCJMU07_5170 PF01043 SecA preprotein cross-linking domain BCJMU07_5170 PF07516 SecA Wing and Scaffold domain BCJMU07_5170 PF02810 SEC-C motif BCJMU07_5170 PF07517 SecA DEAD-like domain BCJMU07_5171 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus BCJMU07_5171 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein BCJMU07_5172 PF00313 'Cold-shock' DNA-binding domain BCJMU07_5174 PF00271 Helicase conserved C-terminal domain BCJMU07_5174 PF04851 Type III restriction enzyme, res subunit BCJMU07_5175 PF01476 LysM domain BCJMU07_5175 PF00877 NlpC/P60 family BCJMU07_5176 PF01638 HxlR-like helix-turn-helix BCJMU07_5177 PF02645 Uncharacterised protein, DegV family COG1307 BCJMU07_5178 PF09186 Domain of unknown function (DUF1949) BCJMU07_5178 PF01205 Uncharacterized protein family UPF0029 BCJMU07_5179 PF03816 Cell envelope-related transcriptional attenuator domain BCJMU07_5180 PF02350 UDP-N-acetylglucosamine 2-epimerase BCJMU07_5181 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BCJMU07_5181 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BCJMU07_5181 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BCJMU07_5182 PF00953 Glycosyl transferase family 4 BCJMU07_5183 PF01522 Polysaccharide deacetylase BCJMU07_5184 PF00874 PRD domain BCJMU07_5184 PF00158 Sigma-54 interaction domain BCJMU07_5184 PF03610 PTS system fructose IIA component BCJMU07_5186 PF02417 Chromate transporter BCJMU07_5189 PF04794 YdjC-like protein BCJMU07_5190 PF02056 Family 4 glycosyl hydrolase BCJMU07_5190 PF11975 Family 4 glycosyl hydrolase C-terminal domain BCJMU07_5191 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit BCJMU07_5192 PF02378 Phosphotransferase system, EIIC BCJMU07_5193 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BCJMU07_5195 PF02675 S-adenosylmethionine decarboxylase BCJMU07_5198 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit BCJMU07_5199 PF02378 Phosphotransferase system, EIIC BCJMU07_5200 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BCJMU07_5201 PF00375 Sodium:dicarboxylate symporter family BCJMU07_5203 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BCJMU07_5208 PF03466 LysR substrate binding domain BCJMU07_5208 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BCJMU07_5211 PF01654 Cytochrome bd terminal oxidase subunit I BCJMU07_5212 PF02322 Cytochrome bd terminal oxidase subunit II BCJMU07_5213 PF02040 Arsenical pump membrane protein BCJMU07_5214 PF13667 ThiC-associated domain BCJMU07_5214 PF01964 Radical SAM ThiC family BCJMU07_5215 PF02652 L-lactate permease BCJMU07_5216 PF07282 Putative transposase DNA-binding domain BCJMU07_5216 PF12323 Helix-turn-helix domain BCJMU07_5216 PF01385 Probable transposase BCJMU07_5218 PF09988 Uncharacterized metal-binding protein (DUF2227) BCJMU07_5221 PF00884 Sulfatase BCJMU07_5222 PF01063 Amino-transferase class IV BCJMU07_5223 PF00877 NlpC/P60 family BCJMU07_5223 PF01476 LysM domain BCJMU07_5224 PF07662 Na+ dependent nucleoside transporter C-terminus BCJMU07_5224 PF01773 Na+ dependent nucleoside transporter N-terminus BCJMU07_5228 PF02028 BCCT, betaine/carnitine/choline family transporter BCJMU07_5229 PF01476 LysM domain BCJMU07_5229 PF06725 3D domain BCJMU07_5234 PF04434 SWIM zinc finger BCJMU07_5235 PF12419 SNF2 Helicase protein BCJMU07_5235 PF00271 Helicase conserved C-terminal domain BCJMU07_5235 PF00176 SNF2 family N-terminal domain BCJMU07_5242 PF04542 Sigma-70 region 2 BCJMU07_5242 PF04545 Sigma-70, region 4 BCJMU07_5243 PF04893 Yip1 domain BCJMU07_5244 PF04893 Yip1 domain BCJMU07_5245 PF02687 FtsX-like permease family BCJMU07_5245 PF12704 MacB-like periplasmic core domain BCJMU07_5246 PF00005 ABC transporter BCJMU07_5250 PF07690 Major Facilitator Superfamily BCJMU07_5253 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCJMU07_5253 PF00989 PAS fold BCJMU07_5253 PF00512 His Kinase A (phospho-acceptor) domain BCJMU07_5253 PF16736 Single Cache-like BCJMU07_5254 PF00486 Transcriptional regulatory protein, C terminal BCJMU07_5254 PF00072 Response regulator receiver domain BCJMU07_5255 PF16363 GDP-mannose 4,6 dehydratase BCJMU07_5256 PF16363 GDP-mannose 4,6 dehydratase BCJMU07_5258 PF03816 Cell envelope-related transcriptional attenuator domain BCJMU07_5266 PF13439 Glycosyltransferase Family 4 BCJMU07_5266 PF00534 Glycosyl transferases group 1 BCJMU07_5269 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BCJMU07_5269 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BCJMU07_5269 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BCJMU07_5270 PF02397 Bacterial sugar transferase BCJMU07_5271 PF00483 Nucleotidyl transferase BCJMU07_5273 PF13614 AAA domain BCJMU07_5274 PF13807 G-rich domain on putative tyrosine kinase BCJMU07_5274 PF02706 Chain length determinant protein BCJMU07_5275 PF13614 AAA domain BCJMU07_5276 PF07977 FabA-like domain BCJMU07_5278 PF12116 Stage III sporulation protein D BCJMU07_5280 PF01551 Peptidase family M23 BCJMU07_5282 PF00005 ABC transporter BCJMU07_5283 PF04397 LytTr DNA-binding domain BCJMU07_5283 PF00072 Response regulator receiver domain BCJMU07_5284 PF08486 Stage II sporulation protein BCJMU07_5285 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BCJMU07_5287 PF06612 Protein of unknown function (DUF1146) BCJMU07_5288 PF00361 Proton-conducting membrane transporter BCJMU07_5289 PF00361 Proton-conducting membrane transporter BCJMU07_5290 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus BCJMU07_5290 PF00361 Proton-conducting membrane transporter BCJMU07_5290 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BCJMU07_5291 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L BCJMU07_5292 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 BCJMU07_5294 PF00146 NADH dehydrogenase BCJMU07_5295 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit BCJMU07_5296 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit BCJMU07_5297 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit BCJMU07_5298 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 BCJMU07_5299 PF00990 Diguanylate cyclase, GGDEF domain BCJMU07_5299 PF00563 EAL domain BCJMU07_5299 PF03707 Bacterial signalling protein N terminal repeat BCJMU07_5300 PF03707 Bacterial signalling protein N terminal repeat BCJMU07_5300 PF00990 Diguanylate cyclase, GGDEF domain BCJMU07_5300 PF00563 EAL domain BCJMU07_5303 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain BCJMU07_5303 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain BCJMU07_5304 PF02874 ATP synthase alpha/beta family, beta-barrel domain BCJMU07_5304 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BCJMU07_5305 PF00231 ATP synthase BCJMU07_5306 PF02874 ATP synthase alpha/beta family, beta-barrel domain BCJMU07_5306 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BCJMU07_5306 PF00306 ATP synthase alpha/beta chain, C terminal domain BCJMU07_5307 PF00213 ATP synthase delta (OSCP) subunit BCJMU07_5308 PF00430 ATP synthase B/B' CF(0) BCJMU07_5309 PF00137 ATP synthase subunit C BCJMU07_5310 PF00119 ATP synthase A chain BCJMU07_5311 PF03899 ATP synthase I chain BCJMU07_5314 PF00464 Serine hydroxymethyltransferase BCJMU07_5315 PF04260 Protein of unknown function (DUF436) BCJMU07_5316 PF02502 Ribose/Galactose Isomerase BCJMU07_5317 PF01451 Low molecular weight phosphotyrosine protein phosphatase BCJMU07_5318 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BCJMU07_5319 PF07681 DoxX BCJMU07_5320 PF01613 Flavin reductase like domain BCJMU07_5324 PF02659 Putative manganese efflux pump BCJMU07_5325 PF03481 Putative GTP-binding controlling metal-binding BCJMU07_5325 PF01300 Telomere recombination BCJMU07_5327 PF09551 Stage II sporulation protein R (spore_II_R) BCJMU07_5328 PF13847 Methyltransferase domain BCJMU07_5328 PF17827 PrmC N-terminal domain BCJMU07_5329 PF03462 PCRF domain BCJMU07_5329 PF00472 RF-1 domain BCJMU07_5330 PF00265 Thymidine kinase BCJMU07_5331 PF01197 Ribosomal protein L31 BCJMU07_5332 PF07497 Rho termination factor, RNA-binding domain BCJMU07_5332 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BCJMU07_5332 PF07498 Rho termination factor, N-terminal domain BCJMU07_5333 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded BCJMU07_5334 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BCJMU07_5335 PF01116 Fructose-bisphosphate aldolase class-II BCJMU07_5336 PF00072 Response regulator receiver domain BCJMU07_5337 PF10740 Domain of unknown function (DUF2529) BCJMU07_5338 PF06418 CTP synthase N-terminus BCJMU07_5338 PF00117 Glutamine amidotransferase class-I BCJMU07_5339 PF05066 HB1, ASXL, restriction endonuclease HTH domain BCJMU07_5341 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BCJMU07_5341 PF02770 Acyl-CoA dehydrogenase, middle domain BCJMU07_5341 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BCJMU07_5342 PF02770 Acyl-CoA dehydrogenase, middle domain BCJMU07_5342 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BCJMU07_5342 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BCJMU07_5343 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BCJMU07_5343 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BCJMU07_5344 PF00108 Thiolase, N-terminal domain BCJMU07_5344 PF02803 Thiolase, C-terminal domain BCJMU07_5345 PF13183 4Fe-4S dicluster domain BCJMU07_5345 PF02754 Cysteine-rich domain BCJMU07_5346 PF13091 PLD-like domain BCJMU07_5347 PF03851 UV-endonuclease UvdE BCJMU07_5348 PF03707 Bacterial signalling protein N terminal repeat BCJMU07_5348 PF00990 Diguanylate cyclase, GGDEF domain BCJMU07_5348 PF00563 EAL domain BCJMU07_5351 PF00196 Bacterial regulatory proteins, luxR family BCJMU07_5351 PF00072 Response regulator receiver domain BCJMU07_5352 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCJMU07_5352 PF07730 Histidine kinase BCJMU07_5354 PF00005 ABC transporter BCJMU07_5355 PF00557 Metallopeptidase family M24 BCJMU07_5357 PF02225 PA domain BCJMU07_5357 PF04389 Peptidase family M28 BCJMU07_5361 PF08281 Sigma-70, region 4 BCJMU07_5361 PF04542 Sigma-70 region 2 BCJMU07_5362 PF03485 Arginyl tRNA synthetase N terminal domain BCJMU07_5362 PF05746 DALR anticodon binding domain BCJMU07_5362 PF00750 tRNA synthetases class I (R) BCJMU07_5363 PF09148 Domain of unknown function (DUF1934) BCJMU07_5364 PF02016 LD-carboxypeptidase N-terminal domain BCJMU07_5364 PF17676 LD-carboxypeptidase C-terminal domain BCJMU07_5367 PF00491 Arginase family BCJMU07_5368 PF17284 Spermidine synthase tetramerisation domain BCJMU07_5369 PF07690 Major Facilitator Superfamily BCJMU07_5370 PF13411 MerR HTH family regulatory protein BCJMU07_5371 PF03009 Glycerophosphoryl diester phosphodiesterase family BCJMU07_5372 PF00912 Transglycosylase BCJMU07_5372 PF00905 Penicillin binding protein transpeptidase domain BCJMU07_5373 PF08741 YwhD family BCJMU07_5374 PF02163 Peptidase family M50 BCJMU07_5375 PF01361 Tautomerase enzyme BCJMU07_5376 PF01966 HD domain BCJMU07_5377 PF01497 Periplasmic binding protein BCJMU07_5378 PF00005 ABC transporter BCJMU07_5379 PF01032 FecCD transport family BCJMU07_5380 PF01032 FecCD transport family BCJMU07_5381 PF07293 Protein of unknown function (DUF1450) BCJMU07_5384 PF03099 Biotin/lipoate A/B protein ligase family BCJMU07_5385 PF01515 Phosphate acetyl/butaryl transferase BCJMU07_5386 PF06778 Chlorite dismutase BCJMU07_5387 PF00768 D-alanyl-D-alanine carboxypeptidase BCJMU07_5387 PF07943 Penicillin-binding protein 5, C-terminal domain BCJMU07_5388 PF07486 Cell Wall Hydrolase BCJMU07_5389 PF09671 Spore coat protein (Spore_GerQ) BCJMU07_5390 PF04241 Protein of unknown function (DUF423) BCJMU07_5392 PF02254 TrkA-N domain BCJMU07_5392 PF07885 Ion channel BCJMU07_5393 PF00860 Permease family BCJMU07_5395 PF12823 Domain of unknown function (DUF3817) BCJMU07_5396 PF13276 HTH-like domain BCJMU07_5396 PF00665 Integrase core domain BCJMU07_5396 PF13333 Integrase core domain BCJMU07_5397 PF13276 HTH-like domain BCJMU07_5397 PF13333 Integrase core domain BCJMU07_5397 PF00665 Integrase core domain BCJMU07_5399 PF03167 Uracil DNA glycosylase superfamily BCJMU07_5400 PF12679 ABC-2 family transporter protein BCJMU07_5401 PF00005 ABC transporter BCJMU07_5402 PF13472 GDSL-like Lipase/Acylhydrolase family BCJMU07_5403 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BCJMU07_5403 PF00356 Bacterial regulatory proteins, lacI family BCJMU07_5405 PF03447 Homoserine dehydrogenase, NAD binding domain BCJMU07_5405 PF01842 ACT domain BCJMU07_5405 PF00742 Homoserine dehydrogenase BCJMU07_5406 PF04204 Homoserine O-succinyltransferase BCJMU07_5407 PF01053 Cys/Met metabolism PLP-dependent enzyme BCJMU07_5408 PF13419 Haloacid dehalogenase-like hydrolase BCJMU07_5410 PF07282 Putative transposase DNA-binding domain BCJMU07_5410 PF01385 Probable transposase BCJMU07_5410 PF12323 Helix-turn-helix domain BCJMU07_5412 PF00027 Cyclic nucleotide-binding domain BCJMU07_5413 PF02525 Flavodoxin-like fold BCJMU07_5414 PF00196 Bacterial regulatory proteins, luxR family BCJMU07_5414 PF00072 Response regulator receiver domain BCJMU07_5415 PF13185 GAF domain BCJMU07_5415 PF07730 Histidine kinase BCJMU07_5416 PF08543 Phosphomethylpyrimidine kinase BCJMU07_5417 PF07694 5TMR of 5TMR-LYT BCJMU07_5417 PF00990 Diguanylate cyclase, GGDEF domain BCJMU07_5418 PF04328 Selenoprotein, putative BCJMU07_5419 PF02554 Carbon starvation protein CstA BCJMU07_5419 PF13722 5TM C-terminal transporter carbon starvation CstA BCJMU07_5420 PF04397 LytTr DNA-binding domain BCJMU07_5420 PF00072 Response regulator receiver domain BCJMU07_5421 PF07690 Major Facilitator Superfamily BCJMU07_5422 PF03808 Glycosyl transferase WecB/TagA/CpsF family BCJMU07_5425 PF03458 UPF0126 domain BCJMU07_5426 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BCJMU07_5428 PF03061 Thioesterase superfamily BCJMU07_5431 PF00535 Glycosyl transferase family 2 BCJMU07_5432 PF00005 ABC transporter BCJMU07_5432 PF12848 ABC transporter BCJMU07_5436 PF00535 Glycosyl transferase family 2 BCJMU07_5437 PF00440 Bacterial regulatory proteins, tetR family BCJMU07_5438 PF00873 AcrB/AcrD/AcrF family BCJMU07_5439 PF01641 SelR domain BCJMU07_5439 PF01625 Peptide methionine sulfoxide reductase BCJMU07_5440 PF01594 AI-2E family transporter BCJMU07_5441 PF04172 LrgB-like family BCJMU07_5442 PF03788 LrgA family BCJMU07_5443 PF04397 LytTr DNA-binding domain BCJMU07_5443 PF00072 Response regulator receiver domain BCJMU07_5444 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCJMU07_5444 PF13492 GAF domain BCJMU07_5444 PF06580 Histidine kinase BCJMU07_5444 PF07694 5TMR of 5TMR-LYT BCJMU07_5445 PF07690 Major Facilitator Superfamily BCJMU07_5446 PF02028 BCCT, betaine/carnitine/choline family transporter BCJMU07_5447 PF02898 Nitric oxide synthase, oxygenase domain BCJMU07_5448 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BCJMU07_5448 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BCJMU07_5450 PF02293 AmiS/UreI family transporter BCJMU07_5453 PF13276 HTH-like domain BCJMU07_5453 PF00665 Integrase core domain BCJMU07_5453 PF13333 Integrase core domain BCJMU07_5455 PF16363 GDP-mannose 4,6 dehydratase BCJMU07_5456 PF16363 GDP-mannose 4,6 dehydratase BCJMU07_5457 PF03006 Haemolysin-III related BCJMU07_5459 PF00271 Helicase conserved C-terminal domain BCJMU07_5459 PF00270 DEAD/DEAH box helicase BCJMU07_5459 PF03880 DbpA RNA binding domain BCJMU07_5461 PF00478 IMP dehydrogenase / GMP reductase domain BCJMU07_5462 PF01432 Peptidase family M3 BCJMU07_5462 PF08439 Oligopeptidase F BCJMU07_5468 PF04851 Type III restriction enzyme, res subunit BCJMU07_5468 PF08774 VRR-NUC domain BCJMU07_5469 PF01555 DNA methylase BCJMU07_5469 PF18273 Type III R-M EcoP15I C-terminal domain BCJMU07_5474 PF12826 Helix-hairpin-helix motif BCJMU07_5474 PF04002 RadC-like JAB domain BCJMU07_5475 PF02899 Phage integrase, N-terminal SAM-like domain BCJMU07_5475 PF00589 Phage integrase family BCJMU07_5483 PF01381 Helix-turn-helix BCJMU07_5486 PF02796 Helix-turn-helix domain of resolvase BCJMU07_5486 PF00239 Resolvase, N terminal domain BCJMU07_5487 PF02590 Predicted SPOUT methyltransferase BCJMU07_5489 PF13180 PDZ domain BCJMU07_5490 PF00753 Metallo-beta-lactamase superfamily BCJMU07_5491 PF09648 YycH protein BCJMU07_5492 PF07435 YycH protein BCJMU07_5493 PF00672 HAMP domain BCJMU07_5493 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCJMU07_5493 PF00512 His Kinase A (phospho-acceptor) domain BCJMU07_5493 PF13426 PAS domain BCJMU07_5494 PF00072 Response regulator receiver domain BCJMU07_5494 PF00486 Transcriptional regulatory protein, C terminal BCJMU07_5495 PF00709 Adenylosuccinate synthetase BCJMU07_5496 PF03796 DnaB-like helicase C terminal domain BCJMU07_5496 PF00772 DnaB-like helicase N terminal domain BCJMU07_5497 PF03948 Ribosomal protein L9, C-terminal domain BCJMU07_5497 PF01281 Ribosomal protein L9, N-terminal domain BCJMU07_5498 PF01368 DHH family BCJMU07_5498 PF02272 DHHA1 domain BCJMU07_5499 PF09991 Predicted membrane protein (DUF2232) BCJMU07_5500 PF01084 Ribosomal protein S18 BCJMU07_5501 PF00436 Single-strand binding protein family BCJMU07_5502 PF01250 Ribosomal protein S6 BCJMU07_5503 PF01926 50S ribosome-binding GTPase BCJMU07_5503 PF06071 Protein of unknown function (DUF933) BCJMU07_5504 PF06107 Bacterial protein of unknown function (DUF951) BCJMU07_5505 PF00924 Mechanosensitive ion channel BCJMU07_5506 PF06866 Protein of unknown function (DUF1256) BCJMU07_5507 PF02195 ParB-like nuclease domain BCJMU07_5507 PF17762 HTH domain found in ParB protein BCJMU07_5508 PF13614 AAA domain BCJMU07_5509 PF02195 ParB-like nuclease domain BCJMU07_5509 PF17762 HTH domain found in ParB protein BCJMU07_5510 PF02527 rRNA small subunit methyltransferase G BCJMU07_5511 PF01134 Glucose inhibited division protein A BCJMU07_5511 PF13932 GidA associated domain BCJMU07_5512 PF12631 MnmE helical domain BCJMU07_5512 PF10396 GTP-binding protein TrmE N-terminus BCJMU07_5512 PF01926 50S ribosome-binding GTPase BCJMU07_5513 PF14804 Jag N-terminus BCJMU07_5513 PF01424 R3H domain BCJMU07_5514 PF02096 60Kd inner membrane protein BCJMU07_5515 PF00825 Ribonuclease P BCJMU07_5516 PF00468 Ribosomal protein L34 BCJMU07_p1003 PF01022 Bacterial regulatory protein, arsR family BCJMU07_p1004 PF07992 Pyridine nucleotide-disulphide oxidoreductase BCJMU07_p1008 PF17770 Ribonuclease J C-terminal domain BCJMU07_p1008 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain BCJMU07_p1008 PF00753 Metallo-beta-lactamase superfamily BCJMU07_p1009 PF00582 Universal stress protein family BCJMU07_p1010 PF01740 STAS domain BCJMU07_p1010 PF00916 Sulfate permease family BCJMU07_p1011 PF00239 Resolvase, N terminal domain BCJMU07_p1012 PF01022 Bacterial regulatory protein, arsR family BCJMU07_p1014 PF00916 Sulfate permease family BCJMU07_p1014 PF01740 STAS domain BCJMU07_p1016 PF00550 Phosphopantetheine attachment site BCJMU07_p1017 PF03831 PhnA domain BCJMU07_p1017 PF08274 PhnA Zinc-Ribbon BCJMU07_p1020 PF01022 Bacterial regulatory protein, arsR family BCJMU07_p1021 PF01758 Sodium Bile acid symporter family BCJMU07_p1022 PF01451 Low molecular weight phosphotyrosine protein phosphatase BCJMU07_p1023 PF06953 Arsenical resistance operon trans-acting repressor ArsD BCJMU07_p1024 PF02374 Anion-transporting ATPase BCJMU07_p1025 PF07992 Pyridine nucleotide-disulphide oxidoreductase BCJMU07_p1028 PF08722 TnsA endonuclease N terminal BCJMU07_p1028 PF08721 TnsA endonuclease C terminal BCJMU07_p1029 PF00665 Integrase core domain BCJMU07_p1030 PF11426 Tn7 transposition regulator TnsC BCJMU07_p1030 PF13401 AAA domain BCJMU07_p1040 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) BCJMU07_p1041 PF01348 Type II intron maturase BCJMU07_p1041 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) BCJMU07_p1047 PF10087 Uncharacterized protein conserved in bacteria (DUF2325) BCJMU07_p1054 PF08645 Polynucleotide kinase 3 phosphatase BCJMU07_p1057 PF04235 Protein of unknown function (DUF418) BCJMU07_p1063 PF00216 Bacterial DNA-binding protein BCJMU07_p1073 PF18277 AbrB C-terminal domain BCJMU07_p1073 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin BCJMU07_p1076 PF02899 Phage integrase, N-terminal SAM-like domain BCJMU07_p1076 PF00589 Phage integrase family BCJMU07_p1077 PF02899 Phage integrase, N-terminal SAM-like domain BCJMU07_p1077 PF00589 Phage integrase family BCJMU07_p1079 PF02899 Phage integrase, N-terminal SAM-like domain BCJMU07_p1079 PF00589 Phage integrase family BCJMU07_p1080 PF02899 Phage integrase, N-terminal SAM-like domain BCJMU07_p1080 PF00589 Phage integrase family BCJMU07_p1083 PF02311 AraC-like ligand binding domain BCJMU07_p1083 PF12833 Helix-turn-helix domain BCJMU07_p1084 PF11799 impB/mucB/samB family C-terminal domain BCJMU07_p1084 PF11798 IMS family HHH motif BCJMU07_p1084 PF00817 impB/mucB/samB family BCJMU07_p1086 PF17443 Uncharacterized protein pXO2-72 BCJMU07_p1090 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BCJMU07_p1093 PF02899 Phage integrase, N-terminal SAM-like domain BCJMU07_p1093 PF00589 Phage integrase family BCJMU07_p1099 PF01609 Transposase DDE domain BCJMU07_p1100 PF01526 Tn3 transposase DDE domain BCJMU07_p1100 PF13700 Domain of unknown function (DUF4158) BCJMU07_p1101 PF02796 Helix-turn-helix domain of resolvase BCJMU07_p1101 PF00239 Resolvase, N terminal domain BCJMU07_p1103 PF13411 MerR HTH family regulatory protein BCJMU07_p1107 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BCJMU07_p1107 PF00403 Heavy-metal-associated domain BCJMU07_p1107 PF07992 Pyridine nucleotide-disulphide oxidoreductase BCJMU07_p1109 PF13411 MerR HTH family regulatory protein BCJMU07_p111 PF01076 Plasmid recombination enzyme BCJMU07_p1111 PF03243 Alkylmercury lyase BCJMU07_p1111 PF12324 Helix-turn-helix domain of alkylmercury lyase BCJMU07_p1113 PF01609 Transposase DDE domain BCJMU07_p1114 PF14436 Bacterial EndoU nuclease BCJMU07_p1114 PF04740 LXG domain of WXG superfamily BCJMU07_p1116 PF01526 Tn3 transposase DDE domain BCJMU07_p1116 PF13700 Domain of unknown function (DUF4158) BCJMU07_p1117 PF02796 Helix-turn-helix domain of resolvase BCJMU07_p1117 PF00239 Resolvase, N terminal domain BCJMU07_p1118 PF12833 Helix-turn-helix domain BCJMU07_p1118 PF06445 GyrI-like small molecule binding domain BCJMU07_p1119 PF00239 Resolvase, N terminal domain BCJMU07_p1119 PF02796 Helix-turn-helix domain of resolvase BCJMU07_p1121 PF01520 N-acetylmuramoyl-L-alanine amidase BCJMU07_p1121 PF05036 Sporulation related domain BCJMU07_p1122 PF03323 Bacillus/Clostridium GerA spore germination protein BCJMU07_p1124 PF01609 Transposase DDE domain BCJMU07_p1125 PF02899 Phage integrase, N-terminal SAM-like domain BCJMU07_p1125 PF00589 Phage integrase family BCJMU07_p1128 PF03862 SpoVAC/SpoVAEB sporulation membrane protein BCJMU07_p1129 PF07451 Stage V sporulation protein AD (SpoVAD) BCJMU07_p1130 PF03862 SpoVAC/SpoVAEB sporulation membrane protein BCJMU07_p1132 PF04239 Protein of unknown function (DUF421) BCJMU07_p1133 PF00574 Clp protease BCJMU07_p1134 PF00239 Resolvase, N terminal domain BCJMU07_p1134 PF02796 Helix-turn-helix domain of resolvase BCJMU07_p1137 PF03323 Bacillus/Clostridium GerA spore germination protein BCJMU07_p1140 PF13700 Domain of unknown function (DUF4158) BCJMU07_p1140 PF01526 Tn3 transposase DDE domain BCJMU07_p1141 PF01638 HxlR-like helix-turn-helix BCJMU07_p1142 PF08240 Alcohol dehydrogenase GroES-like domain BCJMU07_p1142 PF00107 Zinc-binding dehydrogenase BCJMU07_p1143 PF00756 Putative esterase BCJMU07_p1145 PF18419 ATP-grasp-like domain BCJMU07_p1145 PF04262 Glutamate-cysteine ligase BCJMU07_p1145 PF02655 ATP-grasp domain BCJMU07_p1148 PF03323 Bacillus/Clostridium GerA spore germination protein BCJMU07_p1152 PF05504 Spore germination B3/ GerAC like, C-terminal BCJMU07_p1155 PF00857 Isochorismatase family BCJMU07_p1156 PF13529 Peptidase_C39 like family BCJMU07_p1157 PF00486 Transcriptional regulatory protein, C terminal BCJMU07_p1157 PF00072 Response regulator receiver domain BCJMU07_p1159 PF16736 Single Cache-like BCJMU07_p1159 PF00989 PAS fold BCJMU07_p1159 PF00512 His Kinase A (phospho-acceptor) domain BCJMU07_p1159 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCJMU07_p1165 PF00589 Phage integrase family BCJMU07_p1168 PF18801 response regulator aspartate phosphatase H, N terminal BCJMU07_p1170 PF17209 Hfq protein BCJMU07_p1171 PF01022 Bacterial regulatory protein, arsR family BCJMU07_p1172 PF02600 Disulfide bond formation protein DsbB BCJMU07_p1175 PF00565 Staphylococcal nuclease homologue BCJMU07_p1176 PF01131 DNA topoisomerase BCJMU07_p1176 PF01751 Toprim domain BCJMU07_p1176 PF13342 C-terminal repeat of topoisomerase BCJMU07_p1184 PF08378 Nuclease-related domain BCJMU07_p1191 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) BCJMU07_p1195 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) BCJMU07_p1210 PF01381 Helix-turn-helix BCJMU07_p1211 PF04851 Type III restriction enzyme, res subunit BCJMU07_p1211 PF08774 VRR-NUC domain BCJMU07_p1212 PF01555 DNA methylase BCJMU07_p1212 PF18273 Type III R-M EcoP15I C-terminal domain BCJMU07_p1217 PF13538 UvrD-like helicase C-terminal domain BCJMU07_p1218 PF00589 Phage integrase family BCJMU07_p1218 PF14659 Phage integrase, N-terminal SAM-like domain BCJMU07_p1224 PF01381 Helix-turn-helix BCJMU07_p1230 PF02899 Phage integrase, N-terminal SAM-like domain BCJMU07_p1230 PF00589 Phage integrase family BCJMU07_p1231 PF12826 Helix-hairpin-helix motif BCJMU07_p1231 PF04002 RadC-like JAB domain BCJMU07_p1234 PF02463 RecF/RecN/SMC N terminal domain BCJMU07_p1243 PF03413 Peptidase propeptide and YPEB domain BCJMU07_p1243 PF01447 Thermolysin metallopeptidase, catalytic domain BCJMU07_p1243 PF02868 Thermolysin metallopeptidase, alpha-helical domain BCJMU07_p1243 PF07504 Fungalysin/Thermolysin Propeptide Motif BCJMU07_p1244 PF01022 Bacterial regulatory protein, arsR family BCJMU07_p1245 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading BCJMU07_p1245 PF18416 N-acetylglucosamine binding protein domain 2 BCJMU07_p1248 PF00269 Small, acid-soluble spore proteins, alpha/beta type BCJMU07_p1249 PF13426 PAS domain BCJMU07_p1249 PF08447 PAS fold BCJMU07_p1249 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BCJMU07_p1250 PF02868 Thermolysin metallopeptidase, alpha-helical domain BCJMU07_p1250 PF01447 Thermolysin metallopeptidase, catalytic domain BCJMU07_p1250 PF03413 Peptidase propeptide and YPEB domain BCJMU07_p1250 PF07504 Fungalysin/Thermolysin Propeptide Motif BCJMU07_p1253 PF00877 NlpC/P60 family BCJMU07_p1253 PF08239 Bacterial SH3 domain BCJMU07_p1253 PF01476 LysM domain BCJMU07_p1257 PF13276 HTH-like domain BCJMU07_p1257 PF00665 Integrase core domain BCJMU07_p1264 PF01022 Bacterial regulatory protein, arsR family BCJMU07_p1268 PF00239 Resolvase, N terminal domain BCJMU07_p1268 PF02796 Helix-turn-helix domain of resolvase BCJMU07_p1269 PF04439 Streptomycin adenylyltransferase BCJMU07_p1270 PF00067 Cytochrome P450 BCJMU07_p1274 PF00440 Bacterial regulatory proteins, tetR family BCJMU07_p1275 PF00082 Subtilase family BCJMU07_p1284 PF00665 Integrase core domain BCJMU07_p1284 PF13276 HTH-like domain BCJMU07_p1299 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) BCJMU07_p1299 PF01348 Type II intron maturase BCJMU07_p1311 PF01580 FtsK/SpoIIIE family BCJMU07_p1311 PF09397 Ftsk gamma domain BCJMU07_p1311 PF17854 FtsK alpha domain BCJMU07_p1314 PF00091 Tubulin/FtsZ family, GTPase domain BCJMU07_p1317 PF01385 Probable transposase BCJMU07_p1317 PF07282 Putative transposase DNA-binding domain BCJMU07_p1317 PF12323 Helix-turn-helix domain BCJMU07_p1327 PF13276 HTH-like domain BCJMU07_p1327 PF00665 Integrase core domain BCJMU07_p1327 PF13333 Integrase core domain BCJMU07_p202 PF13700 Domain of unknown function (DUF4158) BCJMU07_p202 PF01526 Tn3 transposase DDE domain BCJMU07_p203 PF00239 Resolvase, N terminal domain BCJMU07_p203 PF02796 Helix-turn-helix domain of resolvase BCJMU07_p212 PF00239 Resolvase, N terminal domain BCJMU07_p212 PF02796 Helix-turn-helix domain of resolvase BCJMU07_p218 PF01022 Bacterial regulatory protein, arsR family BCJMU07_p219 PF00216 Bacterial DNA-binding protein BCJMU07_p220 PF17209 Hfq protein BCJMU07_p223 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin BCJMU07_p223 PF18277 AbrB C-terminal domain BCJMU07_p233 PF00877 NlpC/P60 family BCJMU07_p248 PF18801 response regulator aspartate phosphatase H, N terminal BCJMU07_p260 PF00239 Resolvase, N terminal domain BCJMU07_p260 PF02796 Helix-turn-helix domain of resolvase BCJMU07_p262 PF00665 Integrase core domain BCJMU07_p262 PF13333 Integrase core domain BCJMU07_p262 PF13276 HTH-like domain BCJMU07_p263 PF00665 Integrase core domain BCJMU07_p263 PF13276 HTH-like domain BCJMU07_p263 PF13333 Integrase core domain BCJMU07_p264 PF05067 Manganese containing catalase BCJMU07_p266 PF00269 Small, acid-soluble spore proteins, alpha/beta type BCJMU07_p268 PF00269 Small, acid-soluble spore proteins, alpha/beta type BCJMU07_p269 PF11553 Protein of unknown function (DUF3231) BCJMU07_p272 PF01047 MarR family BCJMU07_p273 PF00581 Rhodanese-like domain BCJMU07_p274 PF01580 FtsK/SpoIIIE family BCJMU07_p274 PF09397 Ftsk gamma domain BCJMU07_p274 PF17854 FtsK alpha domain BCJMU07_p276 PF10898 Protein of unknown function (DUF2716) BCJMU07_p278 PF01695 IstB-like ATP binding protein BCJMU07_p279 PF00665 Integrase core domain BCJMU07_p311 PF02899 Phage integrase, N-terminal SAM-like domain BCJMU07_p311 PF00589 Phage integrase family BCJMU07_p323 PF01051 Initiator Replication protein BCJMU07_p329 PF09378 HAS barrel domain BCJMU07_p329 PF01935 Helicase HerA, central domain BCJMU07_p330 PF00877 NlpC/P60 family BCJMU07_p332 PF13411 MerR HTH family regulatory protein BCJMU07_p332 PF13152 Protein of unknown function (DUF3967) BCJMU07_p401 PF01076 Plasmid recombination enzyme BCJMU07_p404 PF07883 Cupin domain BCJMU07_p408 PF01609 Transposase DDE domain BCJMU07_p411 PF01609 Transposase DDE domain BCJMU07_p507 PF00239 Resolvase, N terminal domain BCJMU07_p507 PF02796 Helix-turn-helix domain of resolvase BCJMU07_p512 PF00893 Small Multidrug Resistance protein BCJMU07_p61 PF02796 Helix-turn-helix domain of resolvase BCJMU07_p61 PF00239 Resolvase, N terminal domain BCJMU07_p65 PF05732 Firmicute plasmid replication protein (RepL) BCJMU07_p93 PF14490 Helix-hairpin-helix containing domain BCJMU07_p93 PF13538 UvrD-like helicase C-terminal domain BCJMU07_p93 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain BCJMU07_t0097 PF05698 Bacterial trigger factor protein (TF) C-terminus BCJMU07_t0097 PF05697 Bacterial trigger factor protein (TF)