locus-tag class description GNE09_00015 PF03372 Endonuclease/Exonuclease/phosphatase family GNE09_00020 PF00882 Zinc dependent phospholipase C GNE09_00030 PF08240 Alcohol dehydrogenase GroES-like domain GNE09_00030 PF00107 Zinc-binding dehydrogenase GNE09_00050 PF05547 Immune inhibitor A peptidase M6 GNE09_00055 PF00923 Transaldolase/Fructose-6-phosphate aldolase GNE09_00060 PF13407 Periplasmic binding protein domain GNE09_00065 PF02653 Branched-chain amino acid transport system / permease component GNE09_00070 PF00005 ABC transporter GNE09_00075 PF05025 RbsD / FucU transport protein family GNE09_00080 PF00294 pfkB family carbohydrate kinase GNE09_00085 PF00356 Bacterial regulatory proteins, lacI family GNE09_00090 PF07690 Major Facilitator Superfamily GNE09_00095 PF01047 MarR family GNE09_00100 PF07690 Major Facilitator Superfamily GNE09_00110 PF00582 Universal stress protein family GNE09_00115 PF00916 Sulfate permease family GNE09_00115 PF01740 STAS domain GNE09_00125 PF00072 Response regulator receiver domain GNE09_00125 PF00486 Transcriptional regulatory protein, C terminal GNE09_00130 PF00989 PAS fold GNE09_00130 PF00672 HAMP domain GNE09_00130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNE09_00130 PF18698 Histidine kinase sensor domain GNE09_00130 PF00512 His Kinase A (phospho-acceptor) domain GNE09_00135 PF01872 RibD C-terminal domain GNE09_00160 PF00005 ABC transporter GNE09_00195 PF00324 Amino acid permease GNE09_00200 PF00528 Binding-protein-dependent transport system inner membrane component GNE09_00205 PF00528 Binding-protein-dependent transport system inner membrane component GNE09_00210 PF00497 Bacterial extracellular solute-binding proteins, family 3 GNE09_00215 PF00005 ABC transporter GNE09_00220 PF01235 Sodium:alanine symporter family GNE09_00225 PF01636 Phosphotransferase enzyme family GNE09_00230 PF03323 Bacillus/Clostridium GerA spore germination protein GNE09_00245 PF16657 Maltogenic Amylase, C-terminal domain GNE09_00245 PF00128 Alpha amylase, catalytic domain GNE09_00250 PF00367 phosphotransferase system, EIIB GNE09_00250 PF02378 Phosphotransferase system, EIIC GNE09_00255 PF00392 Bacterial regulatory proteins, gntR family GNE09_00255 PF07702 UTRA domain GNE09_00260 PF13520 Amino acid permease GNE09_00265 PF03707 Bacterial signalling protein N terminal repeat GNE09_00265 PF00990 Diguanylate cyclase, GGDEF domain GNE09_00265 PF00563 EAL domain GNE09_00275 PF13396 Phospholipase_D-nuclease N-terminal GNE09_00275 PF13091 PLD-like domain GNE09_00280 PF07728 AAA domain (dynein-related subfamily) GNE09_00290 PF13344 Haloacid dehalogenase-like hydrolase GNE09_00290 PF00293 NUDIX domain GNE09_00295 PF01370 NAD dependent epimerase/dehydratase family GNE09_00300 PF00155 Aminotransferase class I and II GNE09_00310 PF00005 ABC transporter GNE09_00315 PF01032 FecCD transport family GNE09_00320 PF01032 FecCD transport family GNE09_00325 PF01497 Periplasmic binding protein GNE09_00330 PF00854 POT family GNE09_00335 PF08141 Small acid-soluble spore protein H family GNE09_00340 PF01022 Bacterial regulatory protein, arsR family GNE09_00345 PF02652 L-lactate permease GNE09_00350 PF10415 Fumarase C C-terminus GNE09_00350 PF00206 Lyase GNE09_00355 PF03471 Transporter associated domain GNE09_00355 PF00571 CBS domain GNE09_00355 PF01595 Cyclin M transmembrane N-terminal domain GNE09_00360 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GNE09_00365 PF07662 Na+ dependent nucleoside transporter C-terminus GNE09_00365 PF01773 Na+ dependent nucleoside transporter N-terminus GNE09_00370 PF03816 Cell envelope-related transcriptional attenuator domain GNE09_00375 PF04294 VanW like protein GNE09_00395 PF07504 Fungalysin/Thermolysin Propeptide Motif GNE09_00395 PF01447 Thermolysin metallopeptidase, catalytic domain GNE09_00395 PF03413 Peptidase propeptide and YPEB domain GNE09_00395 PF02868 Thermolysin metallopeptidase, alpha-helical domain GNE09_00410 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family GNE09_00410 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain GNE09_00410 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain GNE09_00415 PF00403 Heavy-metal-associated domain GNE09_00420 PF01022 Bacterial regulatory protein, arsR family GNE09_00425 PF13520 Amino acid permease GNE09_00430 PF05222 Alanine dehydrogenase/PNT, N-terminal domain GNE09_00430 PF01262 Alanine dehydrogenase/PNT, C-terminal domain GNE09_00440 PF07849 Protein of unknown function (DUF1641) GNE09_00445 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GNE09_00445 PF00037 4Fe-4S binding domain GNE09_00445 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region GNE09_00445 PF00384 Molybdopterin oxidoreductase GNE09_00445 PF01568 Molydopterin dinucleotide binding domain GNE09_00450 PF02634 FdhD/NarQ family GNE09_00465 PF00072 Response regulator receiver domain GNE09_00465 PF00486 Transcriptional regulatory protein, C terminal GNE09_00470 PF00989 PAS fold GNE09_00470 PF00672 HAMP domain GNE09_00470 PF18698 Histidine kinase sensor domain GNE09_00470 PF00512 His Kinase A (phospho-acceptor) domain GNE09_00470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNE09_00480 PF00392 Bacterial regulatory proteins, gntR family GNE09_00480 PF00155 Aminotransferase class I and II GNE09_00485 PF00892 EamA-like transporter family GNE09_00495 PF00390 Malic enzyme, N-terminal domain GNE09_00495 PF03949 Malic enzyme, NAD binding domain GNE09_00500 PF03390 2-hydroxycarboxylate transporter family GNE09_00505 PF00072 Response regulator receiver domain GNE09_00510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNE09_00510 PF00989 PAS fold GNE09_00510 PF17203 Single cache domain 3 GNE09_00510 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain GNE09_00515 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GNE09_00515 PF00672 HAMP domain GNE09_00515 PF02743 Cache domain GNE09_00520 PF13529 Peptidase_C39 like family GNE09_00530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNE09_00530 PF00512 His Kinase A (phospho-acceptor) domain GNE09_00535 PF00486 Transcriptional regulatory protein, C terminal GNE09_00535 PF00072 Response regulator receiver domain GNE09_00540 PF00149 Calcineurin-like phosphoesterase GNE09_00545 PF13416 Bacterial extracellular solute-binding protein GNE09_00550 PF00528 Binding-protein-dependent transport system inner membrane component GNE09_00555 PF00528 Binding-protein-dependent transport system inner membrane component GNE09_00560 PF00005 ABC transporter GNE09_00560 PF17912 MalK OB fold domain GNE09_00565 PF04309 Glycerol-3-phosphate responsive antiterminator GNE09_00600 PF03412 Peptidase C39 family GNE09_00600 PF00664 ABC transporter transmembrane region GNE09_00600 PF00005 ABC transporter GNE09_00620 PF00392 Bacterial regulatory proteins, gntR family GNE09_00620 PF00155 Aminotransferase class I and II GNE09_00625 PF00892 EamA-like transporter family GNE09_00630 PF00854 POT family GNE09_00640 PF13462 Thioredoxin GNE09_00645 PF02600 Disulfide bond formation protein DsbB GNE09_00660 PF00589 Phage integrase family GNE09_00660 PF02899 Phage integrase, N-terminal SAM-like domain GNE09_00665 PF02899 Phage integrase, N-terminal SAM-like domain GNE09_00665 PF00589 Phage integrase family GNE09_00680 PF03600 Citrate transporter GNE09_00685 PF12431 Transcriptional regulator GNE09_00685 PF00072 Response regulator receiver domain GNE09_00690 PF00989 PAS fold GNE09_00690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNE09_00690 PF17203 Single cache domain 3 GNE09_00690 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain GNE09_00695 PF00672 HAMP domain GNE09_00695 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GNE09_00695 PF02743 Cache domain GNE09_00700 PF15975 Flotillin GNE09_00700 PF01145 SPFH domain / Band 7 family GNE09_00710 PF18496 Collagenase G catalytic helper subdomain GNE09_00710 PF01752 Collagenase GNE09_00710 PF08453 Peptidase family M9 N-terminal GNE09_00715 PF02028 BCCT, betaine/carnitine/choline family transporter GNE09_00725 PF04285 Protein of unknown function (DUF444) GNE09_00730 PF08298 PrkA AAA domain GNE09_00730 PF06798 PrkA serine protein kinase C-terminal domain GNE09_00735 PF00990 Diguanylate cyclase, GGDEF domain GNE09_00735 PF00563 EAL domain GNE09_00735 PF03707 Bacterial signalling protein N terminal repeat GNE09_00740 PF00588 SpoU rRNA Methylase family GNE09_00745 PF12671 Putative amidase domain GNE09_00750 PF08331 Domain of unknown function (DUF1730) GNE09_00760 PF13462 Thioredoxin GNE09_00765 PF00905 Penicillin binding protein transpeptidase domain GNE09_00765 PF00912 Transglycosylase GNE09_00770 PF00293 NUDIX domain GNE09_00770 PF09297 NADH pyrophosphatase zinc ribbon domain GNE09_00775 PF01709 Transcriptional regulator GNE09_00875 PF11023 Zinc-ribbon containing domain GNE09_00885 PF01475 Ferric uptake regulator family GNE09_00890 PF00578 AhpC/TSA family GNE09_00895 PF07885 Ion channel GNE09_00910 PF00005 ABC transporter GNE09_00915 PF00202 Aminotransferase class-III GNE09_00920 PF00310 Glutamine amidotransferases class-II GNE09_00920 PF01493 GXGXG motif GNE09_00920 PF01645 Conserved region in glutamate synthase GNE09_00920 PF04898 Glutamate synthase central domain GNE09_00925 PF06081 Aromatic acid exporter family member 1 GNE09_00930 PF00005 ABC transporter GNE09_00930 PF00664 ABC transporter transmembrane region GNE09_00935 PF04167 Protein of unknown function (DUF402) GNE09_00940 PF14182 YgaB-like protein GNE09_00945 PF04259 Small, acid-soluble spore protein, gamma-type GNE09_00955 PF00730 HhH-GPD superfamily base excision DNA repair protein GNE09_00955 PF14815 NUDIX domain GNE09_00960 PF04307 LexA-binding, inner membrane-associated putative hydrolase GNE09_00965 PF14043 WVELL protein GNE09_00970 PF08176 Small acid-soluble spore protein K family GNE09_00985 PF02631 RecX family GNE09_00990 PF08338 Domain of unknown function (DUF1731) GNE09_00990 PF01370 NAD dependent epimerase/dehydratase family GNE09_00995 PF01979 Amidohydrolase family GNE09_01010 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase GNE09_01010 PF04101 Glycosyltransferase family 28 C-terminal domain GNE09_01015 PF04055 Radical SAM superfamily GNE09_01020 PF02901 Pyruvate formate lyase-like GNE09_01020 PF01228 Glycine radical GNE09_01030 PF00535 Glycosyl transferase family 2 GNE09_01035 PF00551 Formyl transferase GNE09_01035 PF02911 Formyl transferase, C-terminal domain GNE09_01035 PF01370 NAD dependent epimerase/dehydratase family GNE09_01040 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain GNE09_01040 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain GNE09_01040 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain GNE09_01045 PF00535 Glycosyl transferase family 2 GNE09_01060 PF00144 Beta-lactamase GNE09_01065 PF02378 Phosphotransferase system, EIIC GNE09_01065 PF00367 phosphotransferase system, EIIB GNE09_01070 PF04960 Glutaminase GNE09_01090 PF01546 Peptidase family M20/M25/M40 GNE09_01090 PF07687 Peptidase dimerisation domain GNE09_01095 PF00324 Amino acid permease GNE09_01105 PF13426 PAS domain GNE09_01105 PF00158 Sigma-54 interaction domain GNE09_01105 PF02954 Bacterial regulatory protein, Fis family GNE09_01115 PF01416 tRNA pseudouridine synthase GNE09_01125 PF05958 tRNA (Uracil-5-)-methyltransferase GNE09_01125 PF01938 TRAM domain GNE09_01130 PF00730 HhH-GPD superfamily base excision DNA repair protein GNE09_01135 PF01522 Polysaccharide deacetylase GNE09_01140 PF05681 Fumarate hydratase (Fumerase) GNE09_01140 PF05683 Fumarase C-terminus GNE09_01150 PF04055 Radical SAM superfamily GNE09_01150 PF08756 YfkB-like domain GNE09_01155 PF14167 YfkD-like protein GNE09_01160 PF01699 Sodium/calcium exchanger protein GNE09_01165 PF16242 Pyridoxamine 5'-phosphate oxidase like GNE09_01180 PF09335 SNARE associated Golgi protein GNE09_01190 PF10502 Signal peptidase, peptidase S26 GNE09_01200 PF00892 EamA-like transporter family GNE09_01210 PF03631 Virulence factor BrkB GNE09_01220 PF01451 Low molecular weight phosphotyrosine protein phosphatase GNE09_01225 PF06569 Protein of unknown function (DUF1128) GNE09_01230 PF00690 Cation transporter/ATPase, N-terminus GNE09_01230 PF00689 Cation transporting ATPase, C-terminus GNE09_01235 PF05816 Toxic anion resistance protein (TelA) GNE09_01240 PF14266 Putative component of 'biosynthetic module' GNE09_01245 PF03741 Integral membrane protein TerC family GNE09_01250 PF02342 TerD domain GNE09_01255 PF02342 TerD domain GNE09_01260 PF02342 TerD domain GNE09_01265 PF00480 ROK family GNE09_01275 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GNE09_01275 PF03129 Anticodon binding domain GNE09_01275 PF09180 Prolyl-tRNA synthetase, C-terminal GNE09_01290 PF11700 Vacuole effluxer Atg22 like GNE09_01305 PF08360 QacR-like protein, C-terminal region GNE09_01305 PF00440 Bacterial regulatory proteins, tetR family GNE09_01330 PF00041 Fibronectin type III domain GNE09_01330 PF00704 Glycosyl hydrolases family 18 GNE09_01335 PF00005 ABC transporter GNE09_01335 PF12848 ABC transporter GNE09_01340 PF00005 ABC transporter GNE09_01350 PF00528 Binding-protein-dependent transport system inner membrane component GNE09_01355 PF01910 Thiamine-binding protein GNE09_01360 PF00668 Condensation domain GNE09_01360 PF00501 AMP-binding enzyme GNE09_01360 PF13193 AMP-binding enzyme C-terminal domain GNE09_01360 PF00975 Thioesterase domain GNE09_01360 PF00550 Phosphopantetheine attachment site GNE09_01365 PF00672 HAMP domain GNE09_01365 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GNE09_01370 PF03605 Anaerobic c4-dicarboxylate membrane transporter GNE09_01375 PF02581 Thiamine monophosphate synthase GNE09_01380 PF02110 Hydroxyethylthiazole kinase family GNE09_01385 PF01131 DNA topoisomerase GNE09_01385 PF01751 Toprim domain GNE09_01390 PF01061 ABC-2 type transporter GNE09_01395 PF03372 Endonuclease/Exonuclease/phosphatase family GNE09_01400 PF02378 Phosphotransferase system, EIIC GNE09_01400 PF00367 phosphotransferase system, EIIB GNE09_01400 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 GNE09_01405 PF16657 Maltogenic Amylase, C-terminal domain GNE09_01405 PF00128 Alpha amylase, catalytic domain GNE09_01410 PF08031 Berberine and berberine like GNE09_01410 PF01565 FAD binding domain GNE09_01420 PF13545 Crp-like helix-turn-helix domain GNE09_01420 PF00027 Cyclic nucleotide-binding domain GNE09_01425 PF00696 Amino acid kinase family GNE09_01430 PF13520 Amino acid permease GNE09_01435 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain GNE09_01435 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain GNE09_01445 PF02863 Arginine repressor, C-terminal domain GNE09_01445 PF01316 Arginine repressor, DNA binding domain GNE09_01450 PF12729 Four helix bundle sensory module for signal transduction GNE09_01450 PF00672 HAMP domain GNE09_01450 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GNE09_01455 PF00005 ABC transporter GNE09_01460 PF00497 Bacterial extracellular solute-binding proteins, family 3 GNE09_01465 PF00528 Binding-protein-dependent transport system inner membrane component GNE09_01475 PF01266 FAD dependent oxidoreductase GNE09_01475 PF00355 Rieske [2Fe-2S] domain GNE09_01480 PF07690 Major Facilitator Superfamily GNE09_01485 PF10127 RNA repair pathway DNA polymerase beta family GNE09_01505 PF13188 PAS domain GNE09_01505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNE09_01505 PF00512 His Kinase A (phospho-acceptor) domain GNE09_01505 PF00989 PAS fold GNE09_01505 PF13426 PAS domain GNE09_01530 PF12728 Helix-turn-helix domain GNE09_01540 PF07992 Pyridine nucleotide-disulphide oxidoreductase GNE09_01545 PF01497 Periplasmic binding protein GNE09_01550 PF01032 FecCD transport family GNE09_01555 PF01032 FecCD transport family GNE09_01560 PF00596 Class II Aldolase and Adducin N-terminal domain GNE09_01570 PF01636 Phosphotransferase enzyme family GNE09_01575 PF00578 AhpC/TSA family GNE09_01580 PF07992 Pyridine nucleotide-disulphide oxidoreductase GNE09_01580 PF13192 Thioredoxin domain GNE09_01590 PF07687 Peptidase dimerisation domain GNE09_01590 PF01546 Peptidase family M20/M25/M40 GNE09_01605 PF13378 Enolase C-terminal domain-like GNE09_01605 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain GNE09_01620 PF07308 Protein of unknown function (DUF1456) GNE09_01625 PF01207 Dihydrouridine synthase (Dus) GNE09_01630 PF13847 Methyltransferase domain GNE09_01630 PF01938 TRAM domain GNE09_01630 PF05958 tRNA (Uracil-5-)-methyltransferase GNE09_01635 PF07662 Na+ dependent nucleoside transporter C-terminus GNE09_01635 PF01773 Na+ dependent nucleoside transporter N-terminus GNE09_01635 PF07670 Nucleoside recognition GNE09_01650 PF02073 Thermophilic metalloprotease (M29) GNE09_01660 PF00893 Small Multidrug Resistance protein GNE09_01665 PF00171 Aldehyde dehydrogenase family GNE09_01670 PF00158 Sigma-54 interaction domain GNE09_01675 PF00202 Aminotransferase class-III GNE09_01680 PF13419 Haloacid dehalogenase-like hydrolase GNE09_01685 PF00781 Diacylglycerol kinase catalytic domain GNE09_01690 PF02934 GatB/GatE catalytic domain GNE09_01690 PF02637 GatB domain GNE09_01695 PF01425 Amidase GNE09_01700 PF02686 Glu-tRNAGln amidotransferase C subunit GNE09_01705 PF05360 yiaA/B two helix domain GNE09_01710 PF01047 MarR family GNE09_01715 PF02374 Anion-transporting ATPase GNE09_01715 PF17886 HSP20-like domain found in ArsA GNE09_01730 PF03180 NLPA lipoprotein GNE09_01735 PF00528 Binding-protein-dependent transport system inner membrane component GNE09_01740 PF00005 ABC transporter GNE09_01740 PF09383 NIL domain GNE09_01745 PF00857 Isochorismatase family GNE09_01750 PF00171 Aldehyde dehydrogenase family GNE09_01755 PF01925 Sulfite exporter TauE/SafE GNE09_01760 PF07537 CamS sex pheromone cAM373 precursor GNE09_01765 PF01653 NAD-dependent DNA ligase adenylation domain GNE09_01765 PF03120 NAD-dependent DNA ligase OB-fold domain GNE09_01765 PF03119 NAD-dependent DNA ligase C4 zinc finger domain GNE09_01765 PF12826 Helix-hairpin-helix motif GNE09_01765 PF00533 BRCA1 C Terminus (BRCT) domain GNE09_01770 PF00580 UvrD/REP helicase N-terminal domain GNE09_01770 PF13361 UvrD-like helicase C-terminal domain GNE09_01775 PF01884 PcrB family GNE09_01795 PF02844 Phosphoribosylglycinamide synthetase, N domain GNE09_01795 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain GNE09_01795 PF02843 Phosphoribosylglycinamide synthetase, C domain GNE09_01800 PF01808 AICARFT/IMPCHase bienzyme GNE09_01800 PF02142 MGS-like domain GNE09_01805 PF00551 Formyl transferase GNE09_01810 PF00586 AIR synthase related protein, N-terminal domain GNE09_01810 PF02769 AIR synthase related protein, C-terminal domain GNE09_01815 PF00156 Phosphoribosyl transferase domain GNE09_01820 PF00586 AIR synthase related protein, N-terminal domain GNE09_01820 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain GNE09_01820 PF02769 AIR synthase related protein, C-terminal domain GNE09_01830 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase GNE09_01835 PF01259 SAICAR synthetase GNE09_01840 PF00206 Lyase GNE09_01840 PF10397 Adenylosuccinate lyase C-terminus GNE09_01845 PF02222 ATP-grasp domain GNE09_01845 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain GNE09_01850 PF00731 AIR carboxylase GNE09_01870 PF00486 Transcriptional regulatory protein, C terminal GNE09_01870 PF00072 Response regulator receiver domain GNE09_01875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNE09_01875 PF00512 His Kinase A (phospho-acceptor) domain GNE09_01880 PF00005 ABC transporter GNE09_01920 PF00392 Bacterial regulatory proteins, gntR family GNE09_01920 PF00155 Aminotransferase class I and II GNE09_01940 PF01323 DSBA-like thioredoxin domain GNE09_01970 PF00486 Transcriptional regulatory protein, C terminal GNE09_01970 PF00072 Response regulator receiver domain GNE09_01975 PF00860 Permease family GNE09_01980 PF00958 GMP synthase C terminal domain GNE09_01980 PF00117 Glutamine amidotransferase class-I GNE09_01980 PF02540 NAD synthase GNE09_01985 PF00118 TCP-1/cpn60 chaperonin family GNE09_01990 PF00166 Chaperonin 10 Kd subunit GNE09_01995 PF02517 CPBP intramembrane metalloprotease GNE09_02005 PF06971 Putative DNA-binding protein N-terminus GNE09_02005 PF02629 CoA binding domain GNE09_02010 PF12848 ABC transporter GNE09_02010 PF00005 ABC transporter GNE09_02010 PF16326 ABC transporter C-terminal domain GNE09_02015 PF00814 Glycoprotease family GNE09_02020 PF00583 Acetyltransferase (GNAT) family GNE09_02025 PF00814 Glycoprotease family GNE09_02030 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE GNE09_02120 PF17283 SprT-like zinc ribbon domain GNE09_02120 PF10263 SprT-like family GNE09_02130 PF17674 HHH domain GNE09_02130 PF09371 Tex-like protein N-terminal domain GNE09_02130 PF16921 Tex protein YqgF-like domain GNE09_02130 PF00575 S1 RNA binding domain GNE09_02135 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system GNE09_02140 PF01402 Ribbon-helix-helix protein, copG family GNE09_02145 PF00842 Alanine racemase, C-terminal domain GNE09_02145 PF01168 Alanine racemase, N-terminal domain GNE09_02155 PF01648 4'-phosphopantetheinyl transferase superfamily GNE09_02160 PF01694 Rhomboid family GNE09_02165 PF03851 UV-endonuclease UvdE GNE09_02170 PF00271 Helicase conserved C-terminal domain GNE09_02170 PF00270 DEAD/DEAH box helicase GNE09_02175 PF08245 Mur ligase middle domain GNE09_02175 PF02875 Mur ligase family, glutamate ligase domain GNE09_02175 PF01225 Mur ligase family, catalytic domain GNE09_02180 PF01820 D-ala D-ala ligase N-terminus GNE09_02180 PF07478 D-ala D-ala ligase C-terminus GNE09_02185 PF07690 Major Facilitator Superfamily GNE09_02190 PF13520 Amino acid permease GNE09_02200 PF01557 Fumarylacetoacetate (FAA) hydrolase family GNE09_02205 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GNE09_02240 PF00005 ABC transporter GNE09_02240 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GNE09_02245 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GNE09_02245 PF00005 ABC transporter GNE09_02255 PF00528 Binding-protein-dependent transport system inner membrane component GNE09_02260 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GNE09_02270 PF00005 ABC transporter GNE09_02270 PF12848 ABC transporter GNE09_02270 PF16326 ABC transporter C-terminal domain GNE09_02290 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) GNE09_02305 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 GNE09_02305 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) GNE09_02315 PF00356 Bacterial regulatory proteins, lacI family GNE09_02315 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family GNE09_02335 PF14142 YrzO-like protein GNE09_02340 PF00892 EamA-like transporter family GNE09_02345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GNE09_02345 PF03466 LysR substrate binding domain GNE09_02355 PF12727 PBP superfamily domain GNE09_02355 PF12728 Helix-turn-helix domain GNE09_02365 PF00528 Binding-protein-dependent transport system inner membrane component GNE09_02370 PF06800 Sugar transport protein GNE09_02375 PF14748 Pyrroline-5-carboxylate reductase dimerisation GNE09_02375 PF03807 NADP oxidoreductase coenzyme F420-dependent GNE09_02380 PF00248 Aldo/keto reductase family GNE09_02385 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GNE09_02390 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GNE09_02405 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GNE09_02410 PF00005 ABC transporter GNE09_02410 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GNE09_02415 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GNE09_02415 PF00005 ABC transporter GNE09_02420 PF00528 Binding-protein-dependent transport system inner membrane component GNE09_02420 PF12911 N-terminal TM domain of oligopeptide transport permease C GNE09_02425 PF00528 Binding-protein-dependent transport system inner membrane component GNE09_02445 PF07690 Major Facilitator Superfamily GNE09_02455 PF07690 Major Facilitator Superfamily GNE09_02460 PF01565 FAD binding domain GNE09_02475 PF03180 NLPA lipoprotein GNE09_02480 PF09383 NIL domain GNE09_02480 PF00005 ABC transporter GNE09_02485 PF00528 Binding-protein-dependent transport system inner membrane component GNE09_02505 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region GNE09_02505 PF00326 Prolyl oligopeptidase family GNE09_02510 PF01380 SIS domain GNE09_02520 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I GNE09_02520 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III GNE09_02520 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain GNE09_02520 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II GNE09_02525 PF07949 YbbR-like protein GNE09_02530 PF02457 DisA bacterial checkpoint controller nucleotide-binding GNE09_02535 PF00491 Arginase family GNE09_02540 PF02595 Glycerate kinase family GNE09_02610 PF01522 Polysaccharide deacetylase GNE09_02615 PF14089 KinB-signalling pathway activation in sporulation GNE09_02620 PF17898 Spore germination GerD central core domain GNE09_02625 PF10609 NUBPL iron-transfer P-loop NTPase GNE09_02630 PF01520 N-acetylmuramoyl-L-alanine amidase GNE09_02640 PF00380 Ribosomal protein S9/S16 GNE09_02645 PF00572 Ribosomal protein L13 GNE09_02650 PF01416 tRNA pseudouridine synthase GNE09_02655 PF02361 Cobalt transport protein GNE09_02665 PF00005 ABC transporter GNE09_02670 PF01196 Ribosomal protein L17 GNE09_02680 PF00411 Ribosomal protein S11 GNE09_02685 PF00416 Ribosomal protein S13/S18 GNE09_02690 PF00444 Ribosomal protein L36 GNE09_02695 PF01176 Translation initiation factor 1A / IF-1 GNE09_02700 PF00557 Metallopeptidase family M24 GNE09_02705 PF05191 Adenylate kinase, active site lid GNE09_02710 PF00344 SecY translocase GNE09_02715 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A GNE09_02720 PF00327 Ribosomal protein L30p/L7e GNE09_02725 PF00333 Ribosomal protein S5, N-terminal domain GNE09_02725 PF03719 Ribosomal protein S5, C-terminal domain GNE09_02730 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast GNE09_02735 PF00347 Ribosomal protein L6 GNE09_02750 PF00281 Ribosomal protein L5 GNE09_02750 PF00673 ribosomal L5P family C-terminus GNE09_02755 PF00467 KOW motif GNE09_02755 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 GNE09_02760 PF00238 Ribosomal protein L14p/L23e GNE09_02765 PF00366 Ribosomal protein S17 GNE09_02770 PF00831 Ribosomal L29 protein GNE09_02775 PF00252 Ribosomal protein L16p/L10e GNE09_02780 PF00189 Ribosomal protein S3, C-terminal domain GNE09_02780 PF07650 KH domain GNE09_02785 PF00237 Ribosomal protein L22p/L17e GNE09_02795 PF03947 Ribosomal Proteins L2, C-terminal domain GNE09_02795 PF00181 Ribosomal Proteins L2, RNA binding domain GNE09_02800 PF00276 Ribosomal protein L23 GNE09_02805 PF00573 Ribosomal protein L4/L1 family GNE09_02810 PF00297 Ribosomal protein L3 GNE09_02815 PF00338 Ribosomal protein S10p/S20e GNE09_02820 PF03143 Elongation factor Tu C-terminal domain GNE09_02820 PF03144 Elongation factor Tu domain 2 GNE09_02820 PF00009 Elongation factor Tu GTP binding domain GNE09_02825 PF14492 Elongation Factor G, domain II GNE09_02825 PF00679 Elongation factor G C-terminus GNE09_02825 PF03144 Elongation factor Tu domain 2 GNE09_02825 PF00009 Elongation factor Tu GTP binding domain GNE09_02825 PF03764 Elongation factor G, domain IV GNE09_02830 PF00177 Ribosomal protein S7p/S5e GNE09_02835 PF00164 Ribosomal protein S12/S23 GNE09_02840 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family GNE09_02850 PF04560 RNA polymerase Rpb2, domain 7 GNE09_02850 PF10385 RNA polymerase beta subunit external 1 domain GNE09_02850 PF04565 RNA polymerase Rpb2, domain 3 GNE09_02850 PF04561 RNA polymerase Rpb2, domain 2 GNE09_02850 PF04563 RNA polymerase beta subunit GNE09_02850 PF00562 RNA polymerase Rpb2, domain 6 GNE09_02855 PF05175 Methyltransferase small domain GNE09_02860 PF00542 Ribosomal protein L7/L12 C-terminal domain GNE09_02860 PF16320 Ribosomal protein L7/L12 dimerisation domain GNE09_02865 PF00466 Ribosomal protein L10 GNE09_02870 PF00687 Ribosomal protein L1p/L10e family GNE09_02875 PF03946 Ribosomal protein L11, N-terminal domain GNE09_02875 PF00298 Ribosomal protein L11, RNA binding domain GNE09_02880 PF02357 Transcription termination factor nusG GNE09_02880 PF00467 KOW motif GNE09_02885 PF00584 SecE/Sec61-gamma subunits of protein translocation complex GNE09_02890 PF00471 Ribosomal protein L33 GNE09_02895 PF04542 Sigma-70 region 2 GNE09_02895 PF08281 Sigma-70, region 4 GNE09_02900 PF05991 YacP-like NYN domain GNE09_02905 PF00588 SpoU rRNA Methylase family GNE09_02905 PF08032 RNA 2'-O ribose methyltransferase substrate binding GNE09_02910 PF00636 Ribonuclease III domain GNE09_02915 PF09190 DALR domain GNE09_02915 PF01406 tRNA synthetases class I (C) catalytic domain GNE09_02920 PF06426 Serine acetyltransferase, N-terminal GNE09_02920 PF00132 Bacterial transferase hexapeptide (six repeats) GNE09_02925 PF00749 tRNA synthetases class I (E and Q), catalytic domain GNE09_02930 PF02542 YgbB family GNE09_02935 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GNE09_02945 PF10635 DisA bacterial checkpoint controller linker region GNE09_02945 PF02457 DisA bacterial checkpoint controller nucleotide-binding GNE09_02950 PF18073 Rubredoxin metal binding domain GNE09_02960 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain GNE09_02965 PF02151 UvrB/uvrC motif GNE09_02970 PF05848 CtsR N-terminal HTH domain GNE09_02970 PF17727 CtsR C-terminal dimerization domain GNE09_03050 PF01336 OB-fold nucleic acid binding domain GNE09_03050 PF00152 tRNA synthetases class II (D, K and N) GNE09_03055 PF01207 Dihydrouridine synthase (Dus) GNE09_03060 PF01381 Helix-turn-helix GNE09_03065 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) GNE09_03070 PF02152 Dihydroneopterin aldolase GNE09_03075 PF00809 Pterin binding enzyme GNE09_03080 PF01063 Amino-transferase class IV GNE09_03085 PF00117 Glutamine amidotransferase class-I GNE09_03090 PF04715 Anthranilate synthase component I, N terminal region GNE09_03090 PF00425 chorismate binding enzyme GNE09_03095 PF00291 Pyridoxal-phosphate dependent enzyme GNE09_03100 PF01430 Hsp33 protein GNE09_03105 PF03309 Type III pantothenate kinase GNE09_03110 PF01434 Peptidase family M41 GNE09_03110 PF06480 FtsH Extracellular GNE09_03110 PF17862 AAA+ lid domain GNE09_03110 PF00004 ATPase family associated with various cellular activities (AAA) GNE09_03120 PF11734 TilS substrate C-terminal domain GNE09_03120 PF09179 TilS substrate binding domain GNE09_03120 PF01171 PP-loop family GNE09_03125 PF07228 Stage II sporulation protein E (SpoIIE) GNE09_03140 PF00575 S1 RNA binding domain GNE09_03150 PF09578 Spore cortex protein YabQ (Spore_YabQ) GNE09_03155 PF07873 YabP family GNE09_03160 PF01479 S4 domain GNE09_03165 PF03819 MazG nucleotide pyrophosphohydrolase domain GNE09_03165 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GNE09_03170 PF01943 Polysaccharide biosynthesis protein GNE09_03170 PF14667 Polysaccharide biosynthesis C-terminal domain GNE09_03175 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin GNE09_03175 PF15714 Stage V sporulation protein T C-terminal, transcription factor GNE09_03180 PF02559 CarD-like/TRCF domain GNE09_03180 PF00271 Helicase conserved C-terminal domain GNE09_03180 PF00270 DEAD/DEAH box helicase GNE09_03180 PF03461 TRCF domain GNE09_03180 PF17757 UvrB interaction domain GNE09_03190 PF01195 Peptidyl-tRNA hydrolase GNE09_03195 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase GNE09_03195 PF14572 Phosphoribosyl synthetase-associated domain GNE09_03200 PF00132 Bacterial transferase hexapeptide (six repeats) GNE09_03200 PF00483 Nucleotidyl transferase GNE09_03205 PF04026 SpoVG GNE09_03210 PF01042 Endoribonuclease L-PSP GNE09_03215 PF00156 Phosphoribosyl transferase domain GNE09_03215 PF09182 Bacterial purine repressor, N-terminal GNE09_03220 PF00288 GHMP kinases N terminal domain GNE09_03220 PF08544 GHMP kinases C terminal GNE09_03225 PF00269 Small, acid-soluble spore proteins, alpha/beta type GNE09_03230 PF06257 Biofilm formation stimulator VEG GNE09_03235 PF05582 YabG peptidase U57 GNE09_03240 PF00398 Ribosomal RNA adenine dimethylase GNE09_03245 PF13331 Domain of unknown function (DUF4093) GNE09_03245 PF13662 Toprim domain GNE09_03250 PF01026 TatD related DNase GNE09_03255 PF01588 Putative tRNA binding domain GNE09_03255 PF09334 tRNA synthetases class I (M) GNE09_03255 PF08264 Anticodon-binding domain of tRNA GNE09_03265 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GNE09_03270 PF01541 GIY-YIG catalytic domain GNE09_03275 PF05175 Methyltransferase small domain GNE09_03280 PF06156 Initiation control protein YabA GNE09_03285 PF04468 PSP1 C-terminal conserved region GNE09_03290 PF09115 DNA polymerase III, delta subunit, C terminal GNE09_03295 PF02223 Thymidylate kinase GNE09_03300 PF01276 Orn/Lys/Arg decarboxylase, major domain GNE09_03300 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain GNE09_03335 PF07441 SigmaK-factor processing regulatory protein BofA GNE09_03340 PF10704 Protein of unknown function (DUF2508) GNE09_03345 PF02132 RecR protein GNE09_03345 PF13662 Toprim domain GNE09_03350 PF02575 YbaB/EbfC DNA-binding family GNE09_03355 PF12169 DNA polymerase III subunits gamma and tau domain III GNE09_03365 PF14437 MafB19-like deaminase GNE09_03370 PF00857 Isochorismatase family GNE09_03375 PF01712 Deoxynucleoside kinase GNE09_03380 PF01712 Deoxynucleoside kinase GNE09_03395 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GNE09_03395 PF02403 Seryl-tRNA synthetase N-terminal domain GNE09_03400 PF01174 SNO glutamine amidotransferase family GNE09_03405 PF01680 SOR/SNZ family GNE09_03410 PF07943 Penicillin-binding protein 5, C-terminal domain GNE09_03410 PF00768 D-alanyl-D-alanine carboxypeptidase GNE09_03415 PF00571 CBS domain GNE09_03415 PF00478 IMP dehydrogenase / GMP reductase domain GNE09_03450 PF03989 DNA gyrase C-terminal domain, beta-propeller GNE09_03450 PF00521 DNA gyrase/topoisomerase IV, subunit A GNE09_03455 PF00204 DNA gyrase B GNE09_03455 PF00986 DNA gyrase B subunit, carboxyl terminus GNE09_03455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNE09_03455 PF01751 Toprim domain GNE09_03460 PF02463 RecF/RecN/SMC N terminal domain GNE09_03475 PF11638 DnaA N-terminal domain GNE09_03475 PF00308 Bacterial dnaA protein GNE09_03475 PF08299 Bacterial dnaA protein helix-turn-helix GNE09_03480 PF00468 Ribosomal protein L34 GNE09_03485 PF00825 Ribonuclease P GNE09_03490 PF02096 60Kd inner membrane protein GNE09_03495 PF01424 R3H domain GNE09_03495 PF14804 Jag N-terminus GNE09_03500 PF12631 MnmE helical domain GNE09_03500 PF10396 GTP-binding protein TrmE N-terminus GNE09_03500 PF01926 50S ribosome-binding GTPase GNE09_03505 PF13932 GidA associated domain GNE09_03505 PF01134 Glucose inhibited division protein A GNE09_03510 PF02527 rRNA small subunit methyltransferase G GNE09_03515 PF02195 ParB-like nuclease domain GNE09_03515 PF17762 HTH domain found in ParB protein GNE09_03520 PF13614 AAA domain GNE09_03525 PF02195 ParB-like nuclease domain GNE09_03525 PF17762 HTH domain found in ParB protein GNE09_03530 PF06866 Protein of unknown function (DUF1256) GNE09_03535 PF00924 Mechanosensitive ion channel GNE09_03540 PF06107 Bacterial protein of unknown function (DUF951) GNE09_03545 PF01926 50S ribosome-binding GTPase GNE09_03545 PF06071 Protein of unknown function (DUF933) GNE09_03550 PF01250 Ribosomal protein S6 GNE09_03560 PF01084 Ribosomal protein S18 GNE09_03565 PF09991 Predicted membrane protein (DUF2232) GNE09_03570 PF02272 DHHA1 domain GNE09_03570 PF01368 DHH family GNE09_03575 PF01281 Ribosomal protein L9, N-terminal domain GNE09_03575 PF03948 Ribosomal protein L9, C-terminal domain GNE09_03580 PF03796 DnaB-like helicase C terminal domain GNE09_03580 PF00772 DnaB-like helicase N terminal domain GNE09_03585 PF00709 Adenylosuccinate synthetase GNE09_03610 PF00486 Transcriptional regulatory protein, C terminal GNE09_03610 PF00072 Response regulator receiver domain GNE09_03615 PF00672 HAMP domain GNE09_03615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNE09_03615 PF00512 His Kinase A (phospho-acceptor) domain GNE09_03615 PF13426 PAS domain GNE09_03625 PF09648 YycH protein GNE09_03630 PF00753 Metallo-beta-lactamase superfamily GNE09_03635 PF13180 PDZ domain GNE09_03645 PF02590 Predicted SPOUT methyltransferase GNE09_03650 PF13426 PAS domain GNE09_03650 PF13188 PAS domain GNE09_03650 PF00989 PAS fold GNE09_03650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNE09_03650 PF00512 His Kinase A (phospho-acceptor) domain GNE09_03665 PF08439 Oligopeptidase F GNE09_03665 PF01432 Peptidase family M3 GNE09_03670 PF00478 IMP dehydrogenase / GMP reductase domain GNE09_03675 PF03880 DbpA RNA binding domain GNE09_03675 PF00270 DEAD/DEAH box helicase GNE09_03675 PF00271 Helicase conserved C-terminal domain GNE09_03685 PF03006 Haemolysin-III related GNE09_03690 PF16363 GDP-mannose 4,6 dehydratase GNE09_03700 PF02293 AmiS/UreI family transporter GNE09_03710 PF02777 Iron/manganese superoxide dismutases, C-terminal domain GNE09_03710 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain GNE09_03715 PF02898 Nitric oxide synthase, oxygenase domain GNE09_03720 PF02028 BCCT, betaine/carnitine/choline family transporter GNE09_03725 PF07690 Major Facilitator Superfamily GNE09_03730 PF13492 GAF domain GNE09_03730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNE09_03730 PF07694 5TMR of 5TMR-LYT GNE09_03730 PF06580 Histidine kinase GNE09_03735 PF04397 LytTr DNA-binding domain GNE09_03735 PF00072 Response regulator receiver domain GNE09_03740 PF03788 LrgA family GNE09_03745 PF04172 LrgB-like family GNE09_03750 PF01594 AI-2E family transporter GNE09_03755 PF01625 Peptide methionine sulfoxide reductase GNE09_03755 PF01641 SelR domain GNE09_03760 PF00873 AcrB/AcrD/AcrF family GNE09_03765 PF00440 Bacterial regulatory proteins, tetR family GNE09_03770 PF12848 ABC transporter GNE09_03770 PF00005 ABC transporter GNE09_03775 PF08361 MAATS-type transcriptional repressor, C-terminal region GNE09_03775 PF00440 Bacterial regulatory proteins, tetR family GNE09_03785 PF00535 Glycosyl transferase family 2 GNE09_03800 PF00535 Glycosyl transferase family 2 GNE09_03815 PF00535 Glycosyl transferase family 2 GNE09_03820 PF03061 Thioesterase superfamily GNE09_03830 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GNE09_03835 PF03458 UPF0126 domain GNE09_03845 PF13439 Glycosyltransferase Family 4 GNE09_03845 PF00534 Glycosyl transferases group 1 GNE09_03850 PF03808 Glycosyl transferase WecB/TagA/CpsF family GNE09_03855 PF07690 Major Facilitator Superfamily GNE09_03860 PF04397 LytTr DNA-binding domain GNE09_03860 PF00072 Response regulator receiver domain GNE09_03865 PF13722 5TM C-terminal transporter carbon starvation CstA GNE09_03865 PF02554 Carbon starvation protein CstA GNE09_03870 PF04328 Selenoprotein, putative GNE09_03875 PF07694 5TMR of 5TMR-LYT GNE09_03875 PF00990 Diguanylate cyclase, GGDEF domain GNE09_03880 PF08543 Phosphomethylpyrimidine kinase GNE09_03885 PF07730 Histidine kinase GNE09_03885 PF13185 GAF domain GNE09_03890 PF00072 Response regulator receiver domain GNE09_03890 PF00196 Bacterial regulatory proteins, luxR family GNE09_03895 PF02525 Flavodoxin-like fold GNE09_03900 PF00027 Cyclic nucleotide-binding domain GNE09_03905 PF13419 Haloacid dehalogenase-like hydrolase GNE09_03910 PF01053 Cys/Met metabolism PLP-dependent enzyme GNE09_03915 PF04204 Homoserine O-succinyltransferase GNE09_03920 PF03447 Homoserine dehydrogenase, NAD binding domain GNE09_03920 PF00742 Homoserine dehydrogenase GNE09_03920 PF01842 ACT domain GNE09_03930 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family GNE09_03930 PF00356 Bacterial regulatory proteins, lacI family GNE09_03935 PF13472 GDSL-like Lipase/Acylhydrolase family GNE09_03940 PF00005 ABC transporter GNE09_03945 PF12679 ABC-2 family transporter protein GNE09_03950 PF03167 Uracil DNA glycosylase superfamily GNE09_03955 PF12823 Domain of unknown function (DUF3817) GNE09_03965 PF00860 Permease family GNE09_03970 PF02254 TrkA-N domain GNE09_03970 PF07885 Ion channel GNE09_03980 PF04241 Protein of unknown function (DUF423) GNE09_03985 PF09671 Spore coat protein (Spore_GerQ) GNE09_03990 PF07486 Cell Wall Hydrolase GNE09_03995 PF07943 Penicillin-binding protein 5, C-terminal domain GNE09_03995 PF00768 D-alanyl-D-alanine carboxypeptidase GNE09_04005 PF01515 Phosphate acetyl/butaryl transferase GNE09_04010 PF03099 Biotin/lipoate A/B protein ligase family GNE09_04020 PF07293 Protein of unknown function (DUF1450) GNE09_04025 PF01032 FecCD transport family GNE09_04030 PF01032 FecCD transport family GNE09_04035 PF00005 ABC transporter GNE09_04040 PF01497 Periplasmic binding protein GNE09_04045 PF01966 HD domain GNE09_04050 PF01361 Tautomerase enzyme GNE09_04055 PF02163 Peptidase family M50 GNE09_04060 PF08741 YwhD family GNE09_04065 PF00905 Penicillin binding protein transpeptidase domain GNE09_04065 PF00912 Transglycosylase GNE09_04070 PF03009 Glycerophosphoryl diester phosphodiesterase family GNE09_04075 PF13411 MerR HTH family regulatory protein GNE09_04080 PF07690 Major Facilitator Superfamily GNE09_04085 PF17284 Spermidine synthase tetramerisation domain GNE09_04090 PF00491 Arginase family GNE09_04105 PF17676 LD-carboxypeptidase C-terminal domain GNE09_04105 PF02016 LD-carboxypeptidase N-terminal domain GNE09_04110 PF09148 Domain of unknown function (DUF1934) GNE09_04115 PF00750 tRNA synthetases class I (R) GNE09_04115 PF05746 DALR anticodon binding domain GNE09_04115 PF03485 Arginyl tRNA synthetase N terminal domain GNE09_04120 PF08281 Sigma-70, region 4 GNE09_04120 PF04542 Sigma-70 region 2 GNE09_04140 PF04389 Peptidase family M28 GNE09_04140 PF02225 PA domain GNE09_04150 PF00557 Metallopeptidase family M24 GNE09_04155 PF00005 ABC transporter GNE09_04165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNE09_04165 PF07730 Histidine kinase GNE09_04170 PF00196 Bacterial regulatory proteins, luxR family GNE09_04170 PF00072 Response regulator receiver domain GNE09_04175 PF02868 Thermolysin metallopeptidase, alpha-helical domain GNE09_04175 PF07504 Fungalysin/Thermolysin Propeptide Motif GNE09_04175 PF03413 Peptidase propeptide and YPEB domain GNE09_04175 PF01447 Thermolysin metallopeptidase, catalytic domain GNE09_04190 PF03707 Bacterial signalling protein N terminal repeat GNE09_04190 PF00990 Diguanylate cyclase, GGDEF domain GNE09_04190 PF00563 EAL domain GNE09_04195 PF03851 UV-endonuclease UvdE GNE09_04200 PF13091 PLD-like domain GNE09_04205 PF13183 4Fe-4S dicluster domain GNE09_04205 PF02754 Cysteine-rich domain GNE09_04210 PF02803 Thiolase, C-terminal domain GNE09_04210 PF00108 Thiolase, N-terminal domain GNE09_04215 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain GNE09_04215 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain GNE09_04220 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GNE09_04220 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GNE09_04220 PF02770 Acyl-CoA dehydrogenase, middle domain GNE09_04225 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GNE09_04225 PF02770 Acyl-CoA dehydrogenase, middle domain GNE09_04225 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GNE09_04235 PF05066 HB1, ASXL, restriction endonuclease HTH domain GNE09_04240 PF06418 CTP synthase N-terminus GNE09_04240 PF00117 Glutamine amidotransferase class-I GNE09_04245 PF10740 Domain of unknown function (DUF2529) GNE09_04250 PF00072 Response regulator receiver domain GNE09_04255 PF01116 Fructose-bisphosphate aldolase class-II GNE09_04260 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) GNE09_04265 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded GNE09_04270 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GNE09_04270 PF07498 Rho termination factor, N-terminal domain GNE09_04270 PF07497 Rho termination factor, RNA-binding domain GNE09_04275 PF01197 Ribosomal protein L31 GNE09_04280 PF00265 Thymidine kinase GNE09_04285 PF00472 RF-1 domain GNE09_04285 PF03462 PCRF domain GNE09_04290 PF13847 Methyltransferase domain GNE09_04290 PF17827 PrmC N-terminal domain GNE09_04295 PF09551 Stage II sporulation protein R (spore_II_R) GNE09_04305 PF03481 Putative GTP-binding controlling metal-binding GNE09_04305 PF01300 Telomere recombination GNE09_04310 PF02659 Putative manganese efflux pump GNE09_04320 PF01613 Flavin reductase like domain GNE09_04325 PF07681 DoxX GNE09_04330 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 GNE09_04335 PF01451 Low molecular weight phosphotyrosine protein phosphatase GNE09_04340 PF02502 Ribose/Galactose Isomerase GNE09_04345 PF04260 Protein of unknown function (DUF436) GNE09_04350 PF00464 Serine hydroxymethyltransferase GNE09_04370 PF03899 ATP synthase I chain GNE09_04375 PF00119 ATP synthase A chain GNE09_04380 PF00137 ATP synthase subunit C GNE09_04385 PF00430 ATP synthase B/B' CF(0) GNE09_04390 PF00213 ATP synthase delta (OSCP) subunit GNE09_04395 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GNE09_04395 PF00306 ATP synthase alpha/beta chain, C terminal domain GNE09_04395 PF02874 ATP synthase alpha/beta family, beta-barrel domain GNE09_04400 PF00231 ATP synthase GNE09_04405 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GNE09_04405 PF02874 ATP synthase alpha/beta family, beta-barrel domain GNE09_04410 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain GNE09_04410 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain GNE09_04425 PF00563 EAL domain GNE09_04425 PF00990 Diguanylate cyclase, GGDEF domain GNE09_04425 PF03707 Bacterial signalling protein N terminal repeat GNE09_04430 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 GNE09_04435 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit GNE09_04440 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit GNE09_04445 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit GNE09_04450 PF00146 NADH dehydrogenase GNE09_04460 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 GNE09_04465 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L GNE09_04470 PF00361 Proton-conducting membrane transporter GNE09_04470 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus GNE09_04470 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus GNE09_04475 PF00361 Proton-conducting membrane transporter GNE09_04480 PF00361 Proton-conducting membrane transporter GNE09_04485 PF06612 Protein of unknown function (DUF1146) GNE09_04495 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) GNE09_04500 PF08486 Stage II sporulation protein GNE09_04505 PF00072 Response regulator receiver domain GNE09_04505 PF04397 LytTr DNA-binding domain GNE09_04510 PF00005 ABC transporter GNE09_04520 PF01551 Peptidase family M23 GNE09_04530 PF12116 Stage III sporulation protein D GNE09_04540 PF07977 FabA-like domain GNE09_04545 PF13614 AAA domain GNE09_04550 PF13807 G-rich domain on putative tyrosine kinase GNE09_04550 PF02706 Chain length determinant protein GNE09_04555 PF13614 AAA domain GNE09_04565 PF00483 Nucleotidyl transferase GNE09_04570 PF02719 Polysaccharide biosynthesis protein GNE09_04575 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family GNE09_04580 PF02397 Bacterial sugar transferase GNE09_04585 PF00132 Bacterial transferase hexapeptide (six repeats) GNE09_04590 PF13579 Glycosyl transferase 4-like domain GNE09_04595 PF02719 Polysaccharide biosynthesis protein GNE09_04595 PF08485 Polysaccharide biosynthesis protein C-terminal GNE09_04605 PF02350 UDP-N-acetylglucosamine 2-epimerase GNE09_04610 PF00534 Glycosyl transferases group 1 GNE09_04625 PF00534 Glycosyl transferases group 1 GNE09_04625 PF13439 Glycosyltransferase Family 4 GNE09_04640 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain GNE09_04640 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain GNE09_04640 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain GNE09_04655 PF00486 Transcriptional regulatory protein, C terminal GNE09_04655 PF00072 Response regulator receiver domain GNE09_04660 PF00512 His Kinase A (phospho-acceptor) domain GNE09_04660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNE09_04660 PF00989 PAS fold GNE09_04660 PF16736 Single Cache-like GNE09_04675 PF07690 Major Facilitator Superfamily GNE09_04695 PF00005 ABC transporter GNE09_04700 PF12704 MacB-like periplasmic core domain GNE09_04700 PF02687 FtsX-like permease family GNE09_04710 PF04545 Sigma-70, region 4 GNE09_04710 PF04542 Sigma-70 region 2 GNE09_04740 PF00271 Helicase conserved C-terminal domain GNE09_04740 PF00176 SNF2 family N-terminal domain GNE09_04740 PF12419 SNF2 Helicase protein GNE09_04745 PF04434 SWIM zinc finger GNE09_04770 PF06725 3D domain GNE09_04770 PF01476 LysM domain GNE09_04775 PF02028 BCCT, betaine/carnitine/choline family transporter GNE09_04790 PF07662 Na+ dependent nucleoside transporter C-terminus GNE09_04790 PF01773 Na+ dependent nucleoside transporter N-terminus GNE09_04795 PF01476 LysM domain GNE09_04795 PF00877 NlpC/P60 family GNE09_04800 PF01063 Amino-transferase class IV GNE09_04805 PF00884 Sulfatase GNE09_04815 PF09988 Uncharacterized metal-binding protein (DUF2227) GNE09_04830 PF01964 Radical SAM ThiC family GNE09_04830 PF13667 ThiC-associated domain GNE09_04835 PF02040 Arsenical pump membrane protein GNE09_04840 PF02322 Cytochrome bd terminal oxidase subunit II GNE09_04845 PF01654 Cytochrome bd terminal oxidase subunit I GNE09_04855 PF03466 LysR substrate binding domain GNE09_04855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GNE09_04875 PF00375 Sodium:dicarboxylate symporter family GNE09_04880 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GNE09_04885 PF02378 Phosphotransferase system, EIIC GNE09_04890 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit GNE09_04895 PF02675 S-adenosylmethionine decarboxylase GNE09_04905 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GNE09_04910 PF02378 Phosphotransferase system, EIIC GNE09_04915 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit GNE09_04920 PF11975 Family 4 glycosyl hydrolase C-terminal domain GNE09_04920 PF02056 Family 4 glycosyl hydrolase GNE09_04925 PF04794 YdjC-like protein GNE09_04930 PF02417 Chromate transporter GNE09_04940 PF00158 Sigma-54 interaction domain GNE09_04940 PF00874 PRD domain GNE09_04940 PF03610 PTS system fructose IIA component GNE09_04950 PF00953 Glycosyl transferase family 4 GNE09_04960 PF02350 UDP-N-acetylglucosamine 2-epimerase GNE09_04970 PF09186 Domain of unknown function (DUF1949) GNE09_04970 PF01205 Uncharacterized protein family UPF0029 GNE09_04975 PF02645 Uncharacterised protein, DegV family COG1307 GNE09_04980 PF01638 HxlR-like helix-turn-helix GNE09_04985 PF01476 LysM domain GNE09_04985 PF00877 NlpC/P60 family GNE09_04990 PF04851 Type III restriction enzyme, res subunit GNE09_04990 PF00271 Helicase conserved C-terminal domain GNE09_05000 PF00313 'Cold-shock' DNA-binding domain GNE09_05005 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein GNE09_05005 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus GNE09_05035 PF00005 ABC transporter GNE09_05045 PF07516 SecA Wing and Scaffold domain GNE09_05045 PF00271 Helicase conserved C-terminal domain GNE09_05045 PF01043 SecA preprotein cross-linking domain GNE09_05045 PF07517 SecA DEAD-like domain GNE09_05045 PF02810 SEC-C motif GNE09_05055 PF13442 Cytochrome C oxidase, cbb3-type, subunit III GNE09_05060 PF00005 ABC transporter GNE09_05065 PF18075 FtsX extracellular domain GNE09_05065 PF02687 FtsX-like permease family GNE09_05070 PF17820 PDZ domain GNE09_05070 PF03572 Peptidase family S41 GNE09_05070 PF01471 Putative peptidoglycan binding domain GNE09_05075 PF17820 PDZ domain GNE09_05080 PF00005 ABC transporter GNE09_05080 PF00664 ABC transporter transmembrane region GNE09_05085 PF01906 Putative heavy-metal-binding GNE09_05095 PF03358 NADPH-dependent FMN reductase GNE09_05100 PF00376 MerR family regulatory protein GNE09_05100 PF09278 MerR, DNA binding GNE09_05105 PF03466 LysR substrate binding domain GNE09_05105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GNE09_05110 PF03601 Conserved hypothetical protein 698 GNE09_05140 PF13411 MerR HTH family regulatory protein GNE09_05140 PF07739 TipAS antibiotic-recognition domain GNE09_05155 PF02151 UvrB/uvrC motif GNE09_05155 PF04851 Type III restriction enzyme, res subunit GNE09_05155 PF12344 Ultra-violet resistance protein B GNE09_05155 PF00271 Helicase conserved C-terminal domain GNE09_05155 PF17757 UvrB interaction domain GNE09_05160 PF00005 ABC transporter GNE09_05160 PF17760 UvrA interaction domain GNE09_05160 PF17755 UvrA DNA-binding domain GNE09_05170 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV GNE09_05175 PF02603 HPr Serine kinase N terminus GNE09_05175 PF07475 HPr Serine kinase C-terminal domain GNE09_05180 PF01790 Prolipoprotein diacylglyceryl transferase GNE09_05190 PF14602 Hexapeptide repeat of succinyl-transferase GNE09_05200 PF07992 Pyridine nucleotide-disulphide oxidoreductase GNE09_05210 PF00293 NUDIX domain GNE09_05215 PF03668 P-loop ATPase protein family GNE09_05220 PF01933 Uncharacterised protein family UPF0052 GNE09_05225 PF14527 WhiA LAGLIDADG-like domain GNE09_05225 PF10298 WhiA N-terminal LAGLIDADG-like domain GNE09_05225 PF02650 WhiA C-terminal HTH domain GNE09_05230 PF00381 PTS HPr component phosphorylation site GNE09_05235 PF00574 Clp protease GNE09_05240 PF04239 Protein of unknown function (DUF421) GNE09_05250 PF03862 SpoVAC/SpoVAEB sporulation membrane protein GNE09_05255 PF07451 Stage V sporulation protein AD (SpoVAD) GNE09_05260 PF03862 SpoVAC/SpoVAEB sporulation membrane protein GNE09_05280 PF04552 Sigma-54, DNA binding domain GNE09_05280 PF00309 Sigma-54 factor, Activator interacting domain (AID) GNE09_05280 PF04963 Sigma-54 factor, core binding domain GNE09_05290 PF04198 Putative sugar-binding domain GNE09_05295 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain GNE09_05295 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain GNE09_05300 PF00162 Phosphoglycerate kinase GNE09_05305 PF00121 Triosephosphate isomerase GNE09_05310 PF01676 Metalloenzyme superfamily GNE09_05310 PF06415 BPG-independent PGAM N-terminus (iPGM_N) GNE09_05320 PF01156 Inosine-uridine preferring nucleoside hydrolase GNE09_05325 PF03788 LrgA family GNE09_05330 PF04172 LrgB-like family GNE09_05335 PF03840 Preprotein translocase SecG subunit GNE09_05340 PF12146 Serine aminopeptidase, S33 GNE09_05345 PF17876 Cold shock domain GNE09_05345 PF00575 S1 RNA binding domain GNE09_05345 PF08206 Ribonuclease B OB domain GNE09_05345 PF00773 RNB domain GNE09_05350 PF01668 SmpB protein GNE09_05365 PF00072 Response regulator receiver domain GNE09_05365 PF00486 Transcriptional regulatory protein, C terminal GNE09_05375 PF01032 FecCD transport family GNE09_05380 PF01032 FecCD transport family GNE09_05385 PF00005 ABC transporter GNE09_05390 PF17440 Thiol-activated cytolysin beta sandwich domain GNE09_05390 PF01289 Thiol-activated cytolysin GNE09_05400 PF02560 Cyanate lyase C-terminal domain GNE09_05405 PF00484 Carbonic anhydrase GNE09_05410 PF01037 Lrp/AsnC ligand binding domain GNE09_05420 PF01037 Lrp/AsnC ligand binding domain GNE09_05425 PF00857 Isochorismatase family GNE09_05435 PF06146 Phosphate-starvation-inducible E GNE09_05445 PF13302 Acetyltransferase (GNAT) domain GNE09_05450 PF00005 ABC transporter GNE09_05450 PF12848 ABC transporter GNE09_05455 PF07690 Major Facilitator Superfamily GNE09_05470 PF02537 CrcB-like protein, Camphor Resistance (CrcB) GNE09_05475 PF02537 CrcB-like protein, Camphor Resistance (CrcB) GNE09_05485 PF17202 Single cache domain 3 GNE09_05485 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GNE09_05485 PF00672 HAMP domain GNE09_05495 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain GNE09_05495 PF01565 FAD binding domain GNE09_05500 PF00579 tRNA synthetases class I (W and Y) GNE09_05500 PF01479 S4 domain GNE09_05505 PF07992 Pyridine nucleotide-disulphide oxidoreductase GNE09_05510 PF07849 Protein of unknown function (DUF1641) GNE09_05515 PF01638 HxlR-like helix-turn-helix GNE09_05520 PF07690 Major Facilitator Superfamily GNE09_05525 PF00248 Aldo/keto reductase family GNE09_05540 PF13460 NAD(P)H-binding GNE09_05545 PF01235 Sodium:alanine symporter family GNE09_05550 PF01235 Sodium:alanine symporter family GNE09_05555 PF01773 Na+ dependent nucleoside transporter N-terminus GNE09_05555 PF07662 Na+ dependent nucleoside transporter C-terminus GNE09_05560 PF01773 Na+ dependent nucleoside transporter N-terminus GNE09_05560 PF07662 Na+ dependent nucleoside transporter C-terminus GNE09_05565 PF04235 Protein of unknown function (DUF418) GNE09_05570 PF00210 Ferritin-like domain GNE09_05580 PF03641 Possible lysine decarboxylase GNE09_05595 PF00210 Ferritin-like domain GNE09_05600 PF01235 Sodium:alanine symporter family GNE09_05605 PF02080 TrkA-C domain GNE09_05610 PF00999 Sodium/hydrogen exchanger family GNE09_05615 PF09335 SNARE associated Golgi protein GNE09_05625 PF01047 MarR family GNE09_05630 PF02678 Pirin GNE09_05630 PF17954 Quercetinase C-terminal cupin domain GNE09_05635 PF07504 Fungalysin/Thermolysin Propeptide Motif GNE09_05635 PF01447 Thermolysin metallopeptidase, catalytic domain GNE09_05635 PF03413 Peptidase propeptide and YPEB domain GNE09_05635 PF02868 Thermolysin metallopeptidase, alpha-helical domain GNE09_05640 PF01883 Iron-sulfur cluster assembly protein GNE09_05645 PF00672 HAMP domain GNE09_05645 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GNE09_05645 PF02743 Cache domain GNE09_05650 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GNE09_05650 PF00672 HAMP domain GNE09_05650 PF02743 Cache domain GNE09_05660 PF09334 tRNA synthetases class I (M) GNE09_05660 PF08264 Anticodon-binding domain of tRNA GNE09_05675 PF16736 Single Cache-like GNE09_05675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNE09_05675 PF00512 His Kinase A (phospho-acceptor) domain GNE09_05675 PF00989 PAS fold GNE09_05680 PF00072 Response regulator receiver domain GNE09_05680 PF00486 Transcriptional regulatory protein, C terminal GNE09_05685 PF17969 L,D-transpeptidase C-terminal domain GNE09_05685 PF03734 L,D-transpeptidase catalytic domain GNE09_05730 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) GNE09_05730 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 GNE09_05740 PF02096 60Kd inner membrane protein GNE09_05755 PF13520 Amino acid permease GNE09_05760 PF07690 Major Facilitator Superfamily GNE09_05775 PF00672 HAMP domain GNE09_05775 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GNE09_05775 PF02743 Cache domain GNE09_05780 PF01910 Thiamine-binding protein GNE09_05785 PF10835 Protein of unknown function (DUF2573) GNE09_05790 PF01619 Proline dehydrogenase GNE09_05795 PF00768 D-alanyl-D-alanine carboxypeptidase GNE09_05795 PF07943 Penicillin-binding protein 5, C-terminal domain GNE09_05800 PF14115 YuzL-like protein GNE09_05805 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain GNE09_05805 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain GNE09_05805 PF00378 Enoyl-CoA hydratase/isomerase GNE09_05810 PF00108 Thiolase, N-terminal domain GNE09_05810 PF02803 Thiolase, C-terminal domain GNE09_05815 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GNE09_05815 PF02770 Acyl-CoA dehydrogenase, middle domain GNE09_05815 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GNE09_05820 PF00753 Metallo-beta-lactamase superfamily GNE09_05835 PF00056 lactate/malate dehydrogenase, NAD binding domain GNE09_05835 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain GNE09_05855 PF03960 ArsC family GNE09_05860 PF01597 Glycine cleavage H-protein GNE09_05865 PF01751 Toprim domain GNE09_05870 PF00085 Thioredoxin GNE09_05880 PF00005 ABC transporter GNE09_05880 PF09383 NIL domain GNE09_05885 PF00528 Binding-protein-dependent transport system inner membrane component GNE09_05890 PF03180 NLPA lipoprotein GNE09_05895 PF03180 NLPA lipoprotein GNE09_05900 PF00005 ABC transporter GNE09_05905 PF01458 Uncharacterized protein family (UPF0051) GNE09_05910 PF00266 Aminotransferase class-V GNE09_05915 PF01592 NifU-like N terminal domain GNE09_05920 PF01458 Uncharacterized protein family (UPF0051) GNE09_05925 PF02872 5'-nucleotidase, C-terminal domain GNE09_05930 PF08827 Domain of unknown function (DUF1805) GNE09_05935 PF09560 Sporulation protein YunB (Spo_YunB) GNE09_05940 PF01551 Peptidase family M23 GNE09_05945 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family GNE09_05945 PF04055 Radical SAM superfamily GNE09_05965 PF10086 YhfC intramembrane metalloprotease GNE09_05970 PF07739 TipAS antibiotic-recognition domain GNE09_05970 PF13411 MerR HTH family regulatory protein GNE09_05975 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) GNE09_05980 PF06265 Protein of unknown function (DUF1027) GNE09_05995 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded GNE09_06000 PF01934 Protein of unknown function DUF86 GNE09_06015 PF02525 Flavodoxin-like fold GNE09_06025 PF11202 Phosphoribosyl transferase (PRTase) GNE09_06025 PF15608 PELOTA RNA binding domain GNE09_06045 PF04608 Phosphatidylglycerophosphatase A GNE09_06060 PF01106 NifU-like domain GNE09_06065 PF07315 Protein of unknown function (DUF1462) GNE09_06085 PF03831 PhnA domain GNE09_06085 PF08274 PhnA Zinc-Ribbon GNE09_06090 PF03649 Uncharacterised protein family (UPF0014) GNE09_06095 PF00664 ABC transporter transmembrane region GNE09_06095 PF00005 ABC transporter GNE09_06095 PF03412 Peptidase C39 family GNE09_06105 PF07992 Pyridine nucleotide-disulphide oxidoreductase GNE09_06110 PF07293 Protein of unknown function (DUF1450) GNE09_06115 PF01678 Diaminopimelate epimerase GNE09_06120 PF01521 Iron-sulphur cluster biosynthesis GNE09_06150 PF04463 Protein of unknown function (DUF523) GNE09_06165 PF06445 GyrI-like small molecule binding domain GNE09_06170 PF07992 Pyridine nucleotide-disulphide oxidoreductase GNE09_06175 PF07992 Pyridine nucleotide-disulphide oxidoreductase GNE09_06180 PF00293 NUDIX domain GNE09_06180 PF13344 Haloacid dehalogenase-like hydrolase GNE09_06190 PF06725 3D domain GNE09_06195 PF02789 Cytosol aminopeptidase family, N-terminal domain GNE09_06195 PF00883 Cytosol aminopeptidase family, catalytic domain GNE09_06200 PF02457 DisA bacterial checkpoint controller nucleotide-binding GNE09_06200 PF10372 Bacterial membrane-spanning protein N-terminus GNE09_06205 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I GNE09_06205 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain GNE09_06205 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III GNE09_06205 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II GNE09_06210 PF00483 Nucleotidyl transferase GNE09_06215 PF02632 BioY family GNE09_06225 PF03061 Thioesterase superfamily GNE09_06230 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GNE09_06230 PF03129 Anticodon binding domain GNE09_06245 PF03600 Citrate transporter GNE09_06250 PF00929 Exonuclease GNE09_06255 PF08810 Kinase associated protein B GNE09_06265 PF00155 Aminotransferase class I and II GNE09_06275 PF00561 alpha/beta hydrolase fold GNE09_06275 PF08386 TAP-like protein GNE09_06280 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GNE09_06280 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GNE09_06285 PF01037 Lrp/AsnC ligand binding domain GNE09_06290 PF00155 Aminotransferase class I and II GNE09_06295 PF00575 S1 RNA binding domain GNE09_06300 PF04070 Domain of unknown function (DUF378) GNE09_06305 PF00342 Phosphoglucose isomerase GNE09_06310 PF08868 YugN-like family GNE09_06315 PF02254 TrkA-N domain GNE09_06315 PF07885 Ion channel GNE09_06320 PF02308 MgtC family GNE09_06455 PF00440 Bacterial regulatory proteins, tetR family GNE09_06460 PF00056 lactate/malate dehydrogenase, NAD binding domain GNE09_06460 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain GNE09_06475 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) GNE09_06475 PF00128 Alpha amylase, catalytic domain GNE09_06475 PF02806 Alpha amylase, C-terminal all-beta domain GNE09_06485 PF00483 Nucleotidyl transferase GNE09_06490 PF00534 Glycosyl transferases group 1 GNE09_06490 PF08323 Starch synthase catalytic domain GNE09_06495 PF00343 Carbohydrate phosphorylase GNE09_06505 PF09278 MerR, DNA binding GNE09_06505 PF00376 MerR family regulatory protein GNE09_06515 PF00313 'Cold-shock' DNA-binding domain GNE09_06520 PF01258 Prokaryotic dksA/traR C4-type zinc finger GNE09_06525 PF01040 UbiA prenyltransferase family GNE09_06530 PF00425 chorismate binding enzyme GNE09_06535 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GNE09_06535 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GNE09_06535 PF16582 Middle domain of thiamine pyrophosphate GNE09_06540 PF12697 Alpha/beta hydrolase family GNE09_06545 PF00378 Enoyl-CoA hydratase/isomerase GNE09_06550 PF00501 AMP-binding enzyme GNE09_06550 PF13193 AMP-binding enzyme C-terminal domain GNE09_06555 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain GNE09_06555 PF13378 Enolase C-terminal domain-like GNE09_06560 PF00072 Response regulator receiver domain GNE09_06560 PF00486 Transcriptional regulatory protein, C terminal GNE09_06570 PF02557 D-alanyl-D-alanine carboxypeptidase GNE09_06575 PF17782 DprA winged helix domain GNE09_06575 PF02481 DNA recombination-mediator protein A GNE09_06585 PF01979 Amidohydrolase family GNE09_06590 PF03841 L-seryl-tRNA selenium transferase GNE09_06595 PF07071 KDGP aldolase GNE09_06610 PF02447 GntP family permease GNE09_06620 PF02687 FtsX-like permease family GNE09_06625 PF00005 ABC transporter GNE09_06630 PF02687 FtsX-like permease family GNE09_06635 PF02687 FtsX-like permease family GNE09_06640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNE09_06645 PF00486 Transcriptional regulatory protein, C terminal GNE09_06645 PF00072 Response regulator receiver domain GNE09_06655 PF01022 Bacterial regulatory protein, arsR family GNE09_06660 PF13630 SdpI/YhfL protein family GNE09_06660 PF07853 Protein of unknown function (DUF1648) GNE09_06665 PF00005 ABC transporter GNE09_06675 PF12833 Helix-turn-helix domain GNE09_06675 PF06445 GyrI-like small molecule binding domain GNE09_06680 PF00005 ABC transporter GNE09_06685 PF02687 FtsX-like permease family GNE09_06690 PF00398 Ribosomal RNA adenine dimethylase GNE09_06695 PF09335 SNARE associated Golgi protein GNE09_06700 PF00072 Response regulator receiver domain GNE09_06700 PF00486 Transcriptional regulatory protein, C terminal GNE09_06705 PF00989 PAS fold GNE09_06705 PF16736 Single Cache-like GNE09_06705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNE09_06705 PF00512 His Kinase A (phospho-acceptor) domain GNE09_06755 PF00781 Diacylglycerol kinase catalytic domain GNE09_06785 PF00486 Transcriptional regulatory protein, C terminal GNE09_06785 PF00072 Response regulator receiver domain GNE09_06790 PF00512 His Kinase A (phospho-acceptor) domain GNE09_06790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNE09_06790 PF00672 HAMP domain GNE09_06795 PF09515 Thiamine transporter protein (Thia_YuaJ) GNE09_06805 PF17910 FeoB cytosolic helical domain GNE09_06805 PF07664 Ferrous iron transport protein B C terminus GNE09_06805 PF02421 Ferrous iron transport protein B GNE09_06805 PF07670 Nucleoside recognition GNE09_06820 PF04012 PspA/IM30 family GNE09_06845 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) GNE09_06845 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 GNE09_06860 PF10676 Spore germination protein gerPA/gerPF GNE09_06865 PF02322 Cytochrome bd terminal oxidase subunit II GNE09_06870 PF01654 Cytochrome bd terminal oxidase subunit I GNE09_06875 PF00484 Carbonic anhydrase GNE09_06880 PF01809 Putative membrane protein insertion efficiency factor GNE09_06885 PF02664 S-Ribosylhomocysteinase (LuxS) GNE09_06890 PF00376 MerR family regulatory protein GNE09_06890 PF09278 MerR, DNA binding GNE09_06900 PF00893 Small Multidrug Resistance protein GNE09_06930 PF00293 NUDIX domain GNE09_06955 PF00528 Binding-protein-dependent transport system inner membrane component GNE09_06960 PF00005 ABC transporter GNE09_06980 PF00884 Sulfatase GNE09_06985 PF08386 TAP-like protein GNE09_06985 PF00561 alpha/beta hydrolase fold GNE09_06995 PF02743 Cache domain GNE09_06995 PF00512 His Kinase A (phospho-acceptor) domain GNE09_06995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNE09_07000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNE09_07000 PF13188 PAS domain GNE09_07000 PF00989 PAS fold GNE09_07000 PF13426 PAS domain GNE09_07000 PF00512 His Kinase A (phospho-acceptor) domain GNE09_07060 PF01293 Phosphoenolpyruvate carboxykinase GNE09_07065 PF02773 S-adenosylmethionine synthetase, C-terminal domain GNE09_07065 PF00438 S-adenosylmethionine synthetase, N-terminal domain GNE09_07065 PF02772 S-adenosylmethionine synthetase, central domain GNE09_07080 PF00994 Probable molybdopterin binding domain GNE09_07085 PF12804 MobA-like NTP transferase domain GNE09_07090 PF13439 Glycosyltransferase Family 4 GNE09_07090 PF00534 Glycosyl transferases group 1 GNE09_07095 PF01569 PAP2 superfamily GNE09_07100 PF00132 Bacterial transferase hexapeptide (six repeats) GNE09_07105 PF12146 Serine aminopeptidase, S33 GNE09_07110 PF10776 Protein of unknown function (DUF2600) GNE09_07120 PF01177 Asp/Glu/Hydantoin racemase GNE09_07125 PF06962 Putative rRNA methylase GNE09_07130 PF04055 Radical SAM superfamily GNE09_07130 PF16199 Radical_SAM C-terminal domain GNE09_07135 PF10732 Protein of unknown function (DUF2524) GNE09_07145 PF04235 Protein of unknown function (DUF418) GNE09_07145 PF07786 Protein of unknown function (DUF1624) GNE09_07150 PF00005 ABC transporter GNE09_07160 PF00589 Phage integrase family GNE09_07165 PF02080 TrkA-C domain GNE09_07170 PF00999 Sodium/hydrogen exchanger family GNE09_07175 PF07690 Major Facilitator Superfamily GNE09_07180 PF13603 Leucyl-tRNA synthetase, Domain 2 GNE09_07180 PF00133 tRNA synthetases class I (I, L, M and V) GNE09_07180 PF08264 Anticodon-binding domain of tRNA GNE09_07180 PF09334 tRNA synthetases class I (M) GNE09_07200 PF05504 Spore germination B3/ GerAC like, C-terminal GNE09_07210 PF03323 Bacillus/Clostridium GerA spore germination protein GNE09_07215 PF00561 alpha/beta hydrolase fold GNE09_07225 PF00581 Rhodanese-like domain GNE09_07245 PF06463 Molybdenum Cofactor Synthesis C GNE09_07245 PF04055 Radical SAM superfamily GNE09_07250 PF00899 ThiF family GNE09_07255 PF01967 MoaC family GNE09_07260 PF03454 MoeA C-terminal region (domain IV) GNE09_07260 PF03453 MoeA N-terminal region (domain I and II) GNE09_07260 PF00994 Probable molybdopterin binding domain GNE09_07265 PF03205 Molybdopterin guanine dinucleotide synthesis protein B GNE09_07270 PF02391 MoaE protein GNE09_07285 PF06800 Sugar transport protein GNE09_07295 PF02559 CarD-like/TRCF domain GNE09_07305 PF10957 Sporulation protein Cse60 GNE09_07315 PF08327 Activator of Hsp90 ATPase homolog 1-like protein GNE09_07320 PF01022 Bacterial regulatory protein, arsR family GNE09_07335 PF01943 Polysaccharide biosynthesis protein GNE09_07335 PF14667 Polysaccharide biosynthesis C-terminal domain GNE09_07340 PF00849 RNA pseudouridylate synthase GNE09_07340 PF01479 S4 domain GNE09_07345 PF08220 DeoR-like helix-turn-helix domain GNE09_07350 PF01546 Peptidase family M20/M25/M40 GNE09_07355 PF02834 LigT like Phosphoesterase GNE09_07360 PF17999 Pullulanase N1-terminal domain GNE09_07360 PF00128 Alpha amylase, catalytic domain GNE09_07360 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) GNE09_07365 PF01636 Phosphotransferase enzyme family GNE09_07370 PF14165 YtzH-like protein GNE09_07375 PF02390 Putative methyltransferase GNE09_07380 PF00753 Metallo-beta-lactamase superfamily GNE09_07390 PF05343 M42 glutamyl aminopeptidase GNE09_07395 PF01931 Protein of unknown function DUF84 GNE09_07400 PF00085 Thioredoxin GNE09_07405 PF07285 Protein of unknown function (DUF1444) GNE09_07410 PF01588 Putative tRNA binding domain GNE09_07410 PF14794 Domain of unknown function (DUF4479) GNE09_07420 PF01520 N-acetylmuramoyl-L-alanine amidase GNE09_07420 PF08239 Bacterial SH3 domain GNE09_07425 PF17854 FtsK alpha domain GNE09_07425 PF09397 Ftsk gamma domain GNE09_07425 PF01580 FtsK/SpoIIIE family GNE09_07435 PF01225 Mur ligase family, catalytic domain GNE09_07435 PF08245 Mur ligase middle domain GNE09_07435 PF02875 Mur ligase family, glutamate ligase domain GNE09_07440 PF13411 MerR HTH family regulatory protein GNE09_07445 PF00892 EamA-like transporter family GNE09_07450 PF13302 Acetyltransferase (GNAT) domain GNE09_07465 PF02073 Thermophilic metalloprotease (M29) GNE09_07475 PF11009 Protein of unknown function (DUF2847) GNE09_07480 PF07537 CamS sex pheromone cAM373 precursor GNE09_07485 PF01817 Chorismate mutase type II GNE09_07485 PF00793 DAHP synthetase I family GNE09_07500 PF00356 Bacterial regulatory proteins, lacI family GNE09_07520 PF01741 Large-conductance mechanosensitive channel, MscL GNE09_07525 PF01408 Oxidoreductase family, NAD-binding Rossmann fold GNE09_07530 PF12796 Ankyrin repeats (3 copies) GNE09_07535 PF00512 His Kinase A (phospho-acceptor) domain GNE09_07535 PF16736 Single Cache-like GNE09_07535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNE09_07535 PF00989 PAS fold GNE09_07540 PF00072 Response regulator receiver domain GNE09_07540 PF00486 Transcriptional regulatory protein, C terminal GNE09_07555 PF00850 Histone deacetylase domain GNE09_07560 PF00571 CBS domain GNE09_07565 PF00583 Acetyltransferase (GNAT) family GNE09_07570 PF13193 AMP-binding enzyme C-terminal domain GNE09_07570 PF00501 AMP-binding enzyme GNE09_07575 PF12464 Maltose acetyltransferase GNE09_07575 PF14602 Hexapeptide repeat of succinyl-transferase GNE09_07585 PF04542 Sigma-70 region 2 GNE09_07585 PF08281 Sigma-70, region 4 GNE09_07595 PF00579 tRNA synthetases class I (W and Y) GNE09_07595 PF01479 S4 domain GNE09_07620 PF01479 S4 domain GNE09_07620 PF00163 Ribosomal protein S4/S9 N-terminal domain GNE09_07625 PF01053 Cys/Met metabolism PLP-dependent enzyme GNE09_07630 PF13185 GAF domain GNE09_07635 PF00440 Bacterial regulatory proteins, tetR family GNE09_07640 PF00892 EamA-like transporter family GNE09_07645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GNE09_07645 PF03466 LysR substrate binding domain GNE09_07650 PF06160 Septation ring formation regulator, EzrA GNE09_07655 PF00266 Aminotransferase class-V GNE09_07660 PF02568 Thiamine biosynthesis protein (ThiI) GNE09_07660 PF02926 THUMP domain GNE09_07665 PF00269 Small, acid-soluble spore proteins, alpha/beta type GNE09_07670 PF00501 AMP-binding enzyme GNE09_07670 PF13193 AMP-binding enzyme C-terminal domain GNE09_07680 PF07969 Amidohydrolase family GNE09_07685 PF01513 ATP-NAD kinase GNE09_07695 PF09579 Sporulation protein YtfJ (Spore_YtfJ) GNE09_07700 PF08534 Redoxin GNE09_07705 PF02384 N-6 DNA Methylase GNE09_07710 PF00871 Acetokinase family GNE09_07725 PF12787 EcsC protein family GNE09_07730 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 GNE09_07730 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) GNE09_07745 PF00764 Arginosuccinate synthase GNE09_07750 PF00206 Lyase GNE09_07750 PF14698 Argininosuccinate lyase C-terminal GNE09_07755 PF14698 Argininosuccinate lyase C-terminal GNE09_07755 PF00206 Lyase GNE09_07775 PF00582 Universal stress protein family GNE09_07785 PF05222 Alanine dehydrogenase/PNT, N-terminal domain GNE09_07785 PF01262 Alanine dehydrogenase/PNT, C-terminal domain GNE09_07795 PF07883 Cupin domain GNE09_07800 PF12746 GNAT acetyltransferase GNE09_07835 PF00557 Metallopeptidase family M24 GNE09_07835 PF01321 Creatinase/Prolidase N-terminal domain GNE09_07850 PF07085 DRTGG domain GNE09_07850 PF00571 CBS domain GNE09_07850 PF03061 Thioesterase superfamily GNE09_07850 PF00392 Bacterial regulatory proteins, gntR family GNE09_07860 PF14007 YtpI-like protein GNE09_07865 PF02272 DHHA1 domain GNE09_07865 PF01368 DHH family GNE09_07875 PF14034 Sporulation protein YtrH GNE09_07880 PF01336 OB-fold nucleic acid binding domain GNE09_07880 PF02811 PHP domain GNE09_07880 PF14579 Helix-hairpin-helix motif GNE09_07880 PF17657 Bacterial DNA polymerase III alpha subunit finger domain GNE09_07880 PF07733 Bacterial DNA polymerase III alpha NTPase domain GNE09_07885 PF03949 Malic enzyme, NAD binding domain GNE09_07885 PF00390 Malic enzyme, N-terminal domain GNE09_07890 PF00392 Bacterial regulatory proteins, gntR family GNE09_07895 PF17848 Acetyl-coA carboxylase zinc finger domain GNE09_07895 PF01039 Carboxyl transferase domain GNE09_07900 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit GNE09_07905 PF00365 Phosphofructokinase GNE09_07910 PF00391 PEP-utilising enzyme, mobile domain GNE09_07910 PF00224 Pyruvate kinase, barrel domain GNE09_07910 PF02887 Pyruvate kinase, alpha/beta domain GNE09_07915 PF04186 FxsA cytoplasmic membrane protein GNE09_07920 PF01594 AI-2E family transporter GNE09_07925 PF04284 Protein of unknown function (DUF441) GNE09_07930 PF00285 Citrate synthase, C-terminal domain GNE09_07935 PF00180 Isocitrate/isopropylmalate dehydrogenase GNE09_07940 PF00056 lactate/malate dehydrogenase, NAD binding domain GNE09_07940 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain GNE09_07955 PF00072 Response regulator receiver domain GNE09_07955 PF00486 Transcriptional regulatory protein, C terminal GNE09_07960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNE09_07960 PF00512 His Kinase A (phospho-acceptor) domain GNE09_07960 PF00989 PAS fold GNE09_07960 PF16736 Single Cache-like GNE09_07965 PF00476 DNA polymerase family A GNE09_07965 PF01367 5'-3' exonuclease, C-terminal SAM fold GNE09_07965 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain GNE09_07970 PF06827 Zinc finger found in FPG and IleRS GNE09_07970 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain GNE09_07970 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain GNE09_07980 PF01121 Dephospho-CoA kinase GNE09_07985 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain GNE09_07985 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain GNE09_07990 PF02675 S-adenosylmethionine decarboxylase GNE09_07995 PF03477 ATP cone domain GNE09_08000 PF07261 Replication initiation and membrane attachment GNE09_08005 PF07319 Primosomal protein DnaI N-terminus GNE09_08005 PF01695 IstB-like ATP binding protein GNE09_08015 PF08812 YtxC-like family GNE09_08020 PF02824 TGS domain GNE09_08020 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GNE09_08020 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain GNE09_08020 PF03129 Anticodon binding domain GNE09_08025 PF00707 Translation initiation factor IF-3, C-terminal domain GNE09_08025 PF05198 Translation initiation factor IF-3, N-terminal domain GNE09_08030 PF01632 Ribosomal protein L35 GNE09_08035 PF00453 Ribosomal protein L20 GNE09_08045 PF05343 M42 glutamyl aminopeptidase GNE09_08050 PF16859 Tetracyclin repressor-like, C-terminal domain GNE09_08050 PF00440 Bacterial regulatory proteins, tetR family GNE09_08060 PF07690 Major Facilitator Superfamily GNE09_08075 PF01966 HD domain GNE09_08080 PF14098 Small, acid-soluble spore protein I GNE09_08085 PF00588 SpoU rRNA Methylase family GNE09_08085 PF08032 RNA 2'-O ribose methyltransferase substrate binding GNE09_08090 PF01409 tRNA synthetases class II core domain (F) GNE09_08090 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain GNE09_08095 PF03147 Ferredoxin-fold anticodon binding domain GNE09_08095 PF01588 Putative tRNA binding domain GNE09_08095 PF03484 tRNA synthetase B5 domain GNE09_08095 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain GNE09_08095 PF03483 B3/4 domain GNE09_08100 PF00152 tRNA synthetases class II (D, K and N) GNE09_08100 PF01336 OB-fold nucleic acid binding domain GNE09_08115 PF11858 Domain of unknown function (DUF3378) GNE09_08115 PF01351 Ribonuclease HII GNE09_08120 PF05164 Cell division protein ZapA GNE09_08125 PF02674 Colicin V production protein GNE09_08130 PF14716 Helix-hairpin-helix domain GNE09_08130 PF14791 DNA polymerase beta thumb GNE09_08130 PF02811 PHP domain GNE09_08135 PF00488 MutS domain V GNE09_08135 PF01713 Smr domain GNE09_08140 PF01479 S4 domain GNE09_08140 PF00849 RNA pseudouridylate synthase GNE09_08145 PF05525 Branched-chain amino acid transport protein GNE09_08150 PF05031 Iron Transport-associated domain GNE09_08165 PF01497 Periplasmic binding protein GNE09_08170 PF01032 FecCD transport family GNE09_08175 PF00005 ABC transporter GNE09_08180 PF04203 Sortase domain GNE09_08185 PF03992 Antibiotic biosynthesis monooxygenase GNE09_08190 PF17785 PUA-like domain GNE09_08190 PF10672 S-adenosylmethionine-dependent methyltransferase GNE09_08195 PF09962 Uncharacterized conserved protein (DUF2196) GNE09_08200 PF00486 Transcriptional regulatory protein, C terminal GNE09_08200 PF00072 Response regulator receiver domain GNE09_08205 PF00512 His Kinase A (phospho-acceptor) domain GNE09_08205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNE09_08210 PF00005 ABC transporter GNE09_08225 PF05163 DinB family GNE09_08240 PF01497 Periplasmic binding protein GNE09_08250 PF13193 AMP-binding enzyme C-terminal domain GNE09_08250 PF00501 AMP-binding enzyme GNE09_08255 PF00440 Bacterial regulatory proteins, tetR family GNE09_08255 PF08359 YsiA-like protein, C-terminal region GNE09_08260 PF00378 Enoyl-CoA hydratase/isomerase GNE09_08265 PF01012 Electron transfer flavoprotein domain GNE09_08270 PF00766 Electron transfer flavoprotein FAD-binding domain GNE09_08270 PF01012 Electron transfer flavoprotein domain GNE09_08275 PF00085 Thioredoxin GNE09_08280 PF01541 GIY-YIG catalytic domain GNE09_08280 PF08459 UvrC Helix-hairpin-helix N-terminal GNE09_08280 PF02151 UvrB/uvrC motif GNE09_08285 PF10702 Protein of unknown function (DUF2507) GNE09_08295 PF00890 FAD binding domain GNE09_08295 PF02910 Fumarate reductase flavoprotein C-term GNE09_08300 PF13183 4Fe-4S dicluster domain GNE09_08300 PF13085 2Fe-2S iron-sulfur cluster binding domain GNE09_08305 PF03061 Thioesterase superfamily GNE09_08310 PF02557 D-alanyl-D-alanine carboxypeptidase GNE09_08315 PF01618 MotA/TolQ/ExbB proton channel family GNE09_08320 PF13677 Membrane MotB of proton-channel complex MotA/MotB GNE09_08320 PF00691 OmpA family GNE09_08325 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) GNE09_08330 PF00005 ABC transporter GNE09_08330 PF13732 Domain of unknown function (DUF4162) GNE09_08340 PF02082 Transcriptional regulator GNE09_08345 PF00230 Major intrinsic protein GNE09_08350 PF13536 Putative multidrug resistance efflux transporter GNE09_08355 PF07883 Cupin domain GNE09_08355 PF01381 Helix-turn-helix GNE09_08360 PF04024 PspC domain GNE09_08365 PF07969 Amidohydrolase family GNE09_08370 PF00860 Permease family GNE09_08375 PF00196 Bacterial regulatory proteins, luxR family GNE09_08385 PF00440 Bacterial regulatory proteins, tetR family GNE09_08395 PF07690 Major Facilitator Superfamily GNE09_08400 PF01177 Asp/Glu/Hydantoin racemase GNE09_08405 PF10646 Sporulation and spore germination GNE09_08410 PF03725 3' exoribonuclease family, domain 2 GNE09_08410 PF01138 3' exoribonuclease family, domain 1 GNE09_08415 PF01725 Ham1 family GNE09_08420 PF12850 Calcineurin-like phosphoesterase superfamily domain GNE09_08440 PF11724 YvbH-like oligomerisation region GNE09_08440 PF08000 Bacterial PH domain GNE09_08455 PF05697 Bacterial trigger factor protein (TF) GNE09_08455 PF05698 Bacterial trigger factor protein (TF) C-terminus GNE09_08455 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GNE09_08460 PF07724 AAA domain (Cdc48 subfamily) GNE09_08460 PF10431 C-terminal, D2-small domain, of ClpB protein GNE09_08460 PF06689 ClpX C4-type zinc finger GNE09_08465 PF05362 Lon protease (S16) C-terminal proteolytic domain GNE09_08465 PF00004 ATPase family associated with various cellular activities (AAA) GNE09_08475 PF01926 50S ribosome-binding GTPase GNE09_08480 PF02566 OsmC-like protein GNE09_08485 PF01047 MarR family GNE09_08490 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain GNE09_08490 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain GNE09_08490 PF01488 Shikimate / quinate 5-dehydrogenase GNE09_08500 PF03900 Porphobilinogen deaminase, C-terminal domain GNE09_08500 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain GNE09_08505 PF02602 Uroporphyrinogen-III synthase HemD GNE09_08510 PF00490 Delta-aminolevulinic acid dehydratase GNE09_08515 PF00202 Aminotransferase class-III GNE09_08520 PF01476 LysM domain GNE09_08530 PF10458 Valyl tRNA synthetase tRNA binding arm GNE09_08530 PF08264 Anticodon-binding domain of tRNA GNE09_08530 PF00133 tRNA synthetases class I (I, L, M and V) GNE09_08535 PF08245 Mur ligase middle domain GNE09_08535 PF02875 Mur ligase family, glutamate ligase domain GNE09_08545 PF02545 Maf-like protein GNE09_08550 PF04002 RadC-like JAB domain GNE09_08560 PF04085 rod shape-determining protein MreC GNE09_08570 PF03775 Septum formation inhibitor MinC, C-terminal domain GNE09_08575 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain GNE09_08580 PF01551 Peptidase family M23 GNE09_08585 PF02163 Peptidase family M50 GNE09_08590 PF10150 Ribonuclease E/G family GNE09_08590 PF00575 S1 RNA binding domain GNE09_08600 PF04327 Cysteine protease Prp GNE09_08605 PF01016 Ribosomal L27 protein GNE09_08610 PF14682 Sporulation initiation phospho-transferase B, C-terminal GNE09_08610 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain GNE09_08615 PF01926 50S ribosome-binding GTPase GNE09_08615 PF09269 Domain of unknown function (DUF1967) GNE09_08615 PF01018 GTP1/OBG GNE09_08620 PF00072 Response regulator receiver domain GNE09_08620 PF00486 Transcriptional regulatory protein, C terminal GNE09_08625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNE09_08630 PF00005 ABC transporter GNE09_08635 PF02687 FtsX-like permease family GNE09_08640 PF02687 FtsX-like permease family GNE09_08645 PF00800 Prephenate dehydratase GNE09_08645 PF01842 ACT domain GNE09_08655 PF03475 3-alpha domain GNE09_08655 PF03473 MOSC domain GNE09_08660 PF08279 HTH domain GNE09_08660 PF02829 3H domain GNE09_08665 PF00266 Aminotransferase class-V GNE09_08670 PF00890 FAD binding domain GNE09_08670 PF02910 Fumarate reductase flavoprotein C-term GNE09_08675 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain GNE09_08675 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain GNE09_08680 PF02445 Quinolinate synthetase A protein GNE09_08705 PF01497 Periplasmic binding protein GNE09_08710 PF01330 RuvA N terminal domain GNE09_08710 PF07499 RuvA, C-terminal domain GNE09_08715 PF17864 RuvB AAA lid domain GNE09_08715 PF05496 Holliday junction DNA helicase RuvB P-loop domain GNE09_08715 PF05491 RuvB C-terminal winged helix domain GNE09_08720 PF11146 Protein of unknown function (DUF2905) GNE09_08725 PF02547 Queuosine biosynthesis protein GNE09_08730 PF01702 Queuine tRNA-ribosyltransferase GNE09_08735 PF02699 Preprotein translocase subunit GNE09_08745 PF04239 Protein of unknown function (DUF421) GNE09_08750 PF14667 Polysaccharide biosynthesis C-terminal domain GNE09_08750 PF01943 Polysaccharide biosynthesis protein GNE09_08760 PF07549 SecD/SecF GG Motif GNE09_08760 PF02355 Protein export membrane protein GNE09_08765 PF16916 Dimerisation domain of Zinc Transporter GNE09_08765 PF01545 Cation efflux family GNE09_08770 PF02272 DHHA1 domain GNE09_08770 PF17768 RecJ OB domain GNE09_08770 PF10141 Single-strand DNA-specific exonuclease, C terminal domain GNE09_08770 PF01368 DHH family GNE09_08775 PF00156 Phosphoribosyl transferase domain GNE09_08780 PF04607 Region found in RelA / SpoT proteins GNE09_08780 PF13291 ACT domain GNE09_08780 PF02824 TGS domain GNE09_08785 PF02580 D-Tyr-tRNA(Tyr) deacylase GNE09_08795 PF03129 Anticodon binding domain GNE09_08795 PF13393 Histidyl-tRNA synthetase GNE09_08800 PF00152 tRNA synthetases class II (D, K and N) GNE09_08800 PF02938 GAD domain GNE09_08800 PF01336 OB-fold nucleic acid binding domain GNE09_08805 PF00899 ThiF family GNE09_08815 PF05496 Holliday junction DNA helicase RuvB P-loop domain GNE09_08815 PF16193 AAA C-terminal domain GNE09_08815 PF12002 MgsA AAA+ ATPase C terminal GNE09_08820 PF02082 Transcriptional regulator GNE09_08825 PF00266 Aminotransferase class-V GNE09_08840 PF13538 UvrD-like helicase C-terminal domain GNE09_08840 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain GNE09_08840 PF14490 Helix-hairpin-helix containing domain GNE09_08860 PF01594 AI-2E family transporter GNE09_08870 PF02272 DHHA1 domain GNE09_08870 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain GNE09_08870 PF01411 tRNA synthetases class II (A) GNE09_08880 PF03652 Holliday junction resolvase GNE09_08885 PF06949 Protein of unknown function (DUF1292) GNE09_08890 PF02618 YceG-like family GNE09_08910 PF00485 Phosphoribulokinase / Uridine kinase family GNE09_08915 PF03449 Transcription elongation factor, N-terminal GNE09_08915 PF01272 Transcription elongation factor, GreA/GreB, C-term GNE09_08925 PF00905 Penicillin binding protein transpeptidase domain GNE09_08925 PF03717 Penicillin-binding Protein dimerisation domain GNE09_08940 PF08241 Methyltransferase domain GNE09_08945 PF01048 Phosphorylase superfamily GNE09_08950 PF00291 Pyridoxal-phosphate dependent enzyme GNE09_08955 PF01053 Cys/Met metabolism PLP-dependent enzyme GNE09_08960 PF00465 Iron-containing alcohol dehydrogenase GNE09_08960 PF00171 Aldehyde dehydrogenase family GNE09_08965 PF14143 YrhC-like protein GNE09_08970 PF01497 Periplasmic binding protein GNE09_08975 PF01032 FecCD transport family GNE09_08980 PF00005 ABC transporter GNE09_09010 PF07681 DoxX GNE09_09015 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GNE09_09025 PF00351 Biopterin-dependent aromatic amino acid hydroxylase GNE09_09030 PF00082 Subtilase family GNE09_09030 PF02225 PA domain GNE09_09030 PF05922 Peptidase inhibitor I9 GNE09_09030 PF13860 FlgD Ig-like domain GNE09_09065 PF08386 TAP-like protein GNE09_09065 PF00561 alpha/beta hydrolase fold GNE09_09070 PF00583 Acetyltransferase (GNAT) family GNE09_09075 PF00245 Alkaline phosphatase GNE09_09085 PF04607 Region found in RelA / SpoT proteins GNE09_09090 PF00881 Nitroreductase family GNE09_09095 PF00471 Ribosomal protein L33 GNE09_09100 PF16244 Domain of unknown function (DUF4901) GNE09_09110 PF04545 Sigma-70, region 4 GNE09_09110 PF04542 Sigma-70 region 2 GNE09_09115 PF02666 Phosphatidylserine decarboxylase GNE09_09130 PF01926 50S ribosome-binding GTPase GNE09_09135 PF18317 Shikimate 5'-dehydrogenase C-terminal domain GNE09_09135 PF08501 Shikimate dehydrogenase substrate binding domain GNE09_09135 PF01488 Shikimate / quinate 5-dehydrogenase GNE09_09140 PF01985 CRS1 / YhbY (CRM) domain GNE09_09145 PF01467 Cytidylyltransferase-like GNE09_09150 PF01966 HD domain GNE09_09160 PF13649 Methyltransferase domain GNE09_09165 PF03807 NADP oxidoreductase coenzyme F420-dependent GNE09_09165 PF14748 Pyrroline-5-carboxylate reductase dimerisation GNE09_09170 PF10531 SLBB domain GNE09_09175 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region GNE09_09180 PF13567 Domain of unknown function (DUF4131) GNE09_09180 PF03772 Competence protein GNE09_09180 PF00753 Metallo-beta-lactamase superfamily GNE09_09185 PF14141 YqzM-like protein GNE09_09190 PF06144 DNA polymerase III, delta subunit GNE09_09195 PF01649 Ribosomal protein S20 GNE09_09200 PF03418 Germination protease GNE09_09210 PF06421 GTP-binding protein LepA C-terminus GNE09_09210 PF03144 Elongation factor Tu domain 2 GNE09_09210 PF00009 Elongation factor Tu GTP binding domain GNE09_09210 PF00679 Elongation factor G C-terminus GNE09_09215 PF01638 HxlR-like helix-turn-helix GNE09_09220 PF04055 Radical SAM superfamily GNE09_09220 PF06969 HemN C-terminal domain GNE09_09225 PF01628 HrcA protein C terminal domain GNE09_09230 PF01025 GrpE GNE09_09235 PF00012 Hsp70 protein GNE09_09240 PF01556 DnaJ C terminal domain GNE09_09240 PF00226 DnaJ domain GNE09_09240 PF00684 DnaJ central domain GNE09_09250 PF04452 RNA methyltransferase GNE09_09255 PF01938 TRAM domain GNE09_09255 PF00919 Uncharacterized protein family UPF0004 GNE09_09255 PF04055 Radical SAM superfamily GNE09_09260 PF01165 Ribosomal protein S21 GNE09_09265 PF09424 Yqey-like protein GNE09_09275 PF07873 YabP family GNE09_09280 PF06898 Putative stage IV sporulation protein YqfD GNE09_09285 PF02562 PhoH-like protein GNE09_09290 PF07697 7TM-HD extracellular GNE09_09290 PF01966 HD domain GNE09_09290 PF07698 7TM receptor with intracellular HD hydrolase GNE09_09295 PF02130 Uncharacterized protein family UPF0054 GNE09_09300 PF01219 Prokaryotic diacylglycerol kinase GNE09_09305 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region GNE09_09310 PF01926 50S ribosome-binding GTPase GNE09_09310 PF07650 KH domain GNE09_09320 PF02565 Recombination protein O C terminal GNE09_09320 PF11967 Recombination protein O N terminal GNE09_09325 PF08279 HTH domain GNE09_09325 PF00571 CBS domain GNE09_09330 PF03618 Kinase/pyrophosphorylase GNE09_09340 PF04539 Sigma-70 region 3 GNE09_09340 PF04545 Sigma-70, region 4 GNE09_09340 PF00140 Sigma-70 factor, region 1.2 GNE09_09340 PF03979 Sigma-70 factor, region 1.1 GNE09_09340 PF04542 Sigma-70 region 2 GNE09_09345 PF13442 Cytochrome C oxidase, cbb3-type, subunit III GNE09_09350 PF04816 tRNA (adenine(22)-N(1))-methyltransferase GNE09_09355 PF01784 NIF3 (NGG1p interacting factor 3) GNE09_09370 PF00270 DEAD/DEAH box helicase GNE09_09370 PF00271 Helicase conserved C-terminal domain GNE09_09375 PF01261 Xylose isomerase-like TIM barrel GNE09_09380 PF11116 Protein of unknown function (DUF2624) GNE09_09385 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 GNE09_09385 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) GNE09_09390 PF00005 ABC transporter GNE09_09395 PF00950 ABC 3 transport family GNE09_09400 PF01475 Ferric uptake regulator family GNE09_09405 PF04551 GcpE protein GNE09_09415 PF06691 Protein of unknown function (DUF1189) GNE09_09425 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain GNE09_09425 PF02777 Iron/manganese superoxide dismutases, C-terminal domain GNE09_09430 PF07690 Major Facilitator Superfamily GNE09_09440 PF12849 PBP superfamily domain GNE09_09445 PF00528 Binding-protein-dependent transport system inner membrane component GNE09_09450 PF00528 Binding-protein-dependent transport system inner membrane component GNE09_09455 PF00005 ABC transporter GNE09_09460 PF01895 PhoU domain GNE09_09465 PF00483 Nucleotidyl transferase GNE09_09470 PF00471 Ribosomal protein L33 GNE09_09475 PF01812 5-formyltetrahydrofolate cyclo-ligase family GNE09_09480 PF06014 Bacterial protein of unknown function (DUF910) GNE09_09485 PF00480 ROK family GNE09_09490 PF10958 Protein of unknown function (DUF2759) GNE09_09495 PF00753 Metallo-beta-lactamase superfamily GNE09_09505 PF01022 Bacterial regulatory protein, arsR family GNE09_09515 PF01053 Cys/Met metabolism PLP-dependent enzyme GNE09_09520 PF01053 Cys/Met metabolism PLP-dependent enzyme GNE09_09525 PF02574 Homocysteine S-methyltransferase GNE09_09525 PF02219 Methylenetetrahydrofolate reductase GNE09_09530 PF02965 Vitamin B12 dependent methionine synthase, activation domain GNE09_09530 PF00809 Pterin binding enzyme GNE09_09530 PF02574 Homocysteine S-methyltransferase GNE09_09530 PF02607 B12 binding domain GNE09_09530 PF02310 B12 binding domain GNE09_09535 PF03033 Glycosyltransferase family 28 N-terminal domain GNE09_09535 PF04101 Glycosyltransferase family 28 C-terminal domain GNE09_09570 PF00375 Sodium:dicarboxylate symporter family GNE09_09575 PF11117 Protein of unknown function (DUF2626) GNE09_09585 PF00437 Type II/IV secretion system protein GNE09_09590 PF00482 Type II secretion system (T2SS), protein F GNE09_09625 PF01202 Shikimate kinase GNE09_09630 PF14038 YqzE-like protein GNE09_09650 PF11079 Bacterial protein YqhG of unknown function GNE09_09655 PF00176 SNF2 family N-terminal domain GNE09_09655 PF00271 Helicase conserved C-terminal domain GNE09_09660 PF01571 Aminomethyltransferase folate-binding domain GNE09_09660 PF08669 Glycine cleavage T-protein C-terminal barrel domain GNE09_09665 PF02347 Glycine cleavage system P-protein GNE09_09670 PF02347 Glycine cleavage system P-protein GNE09_09695 PF00893 Small Multidrug Resistance protein GNE09_09700 PF00893 Small Multidrug Resistance protein GNE09_09710 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family GNE09_09710 PF00356 Bacterial regulatory proteins, lacI family GNE09_09720 PF00581 Rhodanese-like domain GNE09_09725 PF03099 Biotin/lipoate A/B protein ligase family GNE09_09750 PF01325 Iron dependent repressor, N-terminal DNA binding domain GNE09_09750 PF02742 Iron dependent repressor, metal binding and dimerisation domain GNE09_09755 PF13419 Haloacid dehalogenase-like hydrolase GNE09_09765 PF07136 Protein of unknown function (DUF1385) GNE09_09775 PF01220 Dehydroquinase class II GNE09_09780 PF00557 Metallopeptidase family M24 GNE09_09780 PF01321 Creatinase/Prolidase N-terminal domain GNE09_09785 PF08207 Elongation factor P (EF-P) KOW-like domain GNE09_09785 PF01132 Elongation factor P (EF-P) OB domain GNE09_09785 PF09285 Elongation factor P, C-terminal GNE09_09810 PF09548 Stage III sporulation protein AB (spore_III_AB) GNE09_09815 PF06686 Stage III sporulation protein AC/AD protein family GNE09_09820 PF06686 Stage III sporulation protein AC/AD protein family GNE09_09825 PF09546 Stage III sporulation protein AE (spore_III_AE) GNE09_09830 PF09581 Stage III sporulation protein AF (Spore_III_AF) GNE09_09840 PF12685 SpoIIIAH-like protein GNE09_09850 PF00364 Biotin-requiring enzyme GNE09_09855 PF00289 Biotin carboxylase, N-terminal domain GNE09_09855 PF02785 Biotin carboxylase C-terminal domain GNE09_09855 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GNE09_09860 PF03780 Asp23 family, cell envelope-related function GNE09_09865 PF01029 NusB family GNE09_09870 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GNE09_09870 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GNE09_09875 PF13742 OB-fold nucleic acid binding domain GNE09_09875 PF02601 Exonuclease VII, large subunit GNE09_09880 PF02609 Exonuclease VII small subunit GNE09_09885 PF00348 Polyprenyl synthetase GNE09_09890 PF13292 1-deoxy-D-xylulose-5-phosphate synthase GNE09_09890 PF02779 Transketolase, pyrimidine binding domain GNE09_09890 PF02780 Transketolase, C-terminal domain GNE09_09895 PF01479 S4 domain GNE09_09895 PF01728 FtsJ-like methyltransferase GNE09_09900 PF01316 Arginine repressor, DNA binding domain GNE09_09900 PF02863 Arginine repressor, C-terminal domain GNE09_09905 PF13476 AAA domain GNE09_09910 PF05580 SpoIVB peptidase S55 GNE09_09910 PF17820 PDZ domain GNE09_09915 PF08769 Sporulation initiation factor Spo0A C terminal GNE09_09915 PF00072 Response regulator receiver domain GNE09_09925 PF14174 YycC-like protein GNE09_09930 PF03009 Glycerophosphoryl diester phosphodiesterase family GNE09_09940 PF02954 Bacterial regulatory protein, Fis family GNE09_09940 PF00989 PAS fold GNE09_09940 PF00158 Sigma-54 interaction domain GNE09_09945 PF01515 Phosphate acetyl/butaryl transferase GNE09_09950 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain GNE09_09950 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase GNE09_09955 PF00871 Acetokinase family GNE09_09960 PF07992 Pyridine nucleotide-disulphide oxidoreductase GNE09_09960 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GNE09_09965 PF00676 Dehydrogenase E1 component GNE09_09970 PF02779 Transketolase, pyrimidine binding domain GNE09_09970 PF02780 Transketolase, C-terminal domain GNE09_09975 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) GNE09_09975 PF02817 e3 binding domain GNE09_09975 PF00364 Biotin-requiring enzyme GNE09_09980 PF01098 Cell cycle protein GNE09_09985 PF04239 Protein of unknown function (DUF421) GNE09_09990 PF09297 NADH pyrophosphatase zinc ribbon domain GNE09_09990 PF00293 NUDIX domain GNE09_09995 PF11208 Protein of unknown function (DUF2992) GNE09_10000 PF06491 Disulphide isomerase GNE09_10005 PF00497 Bacterial extracellular solute-binding proteins, family 3 GNE09_10010 PF00528 Binding-protein-dependent transport system inner membrane component GNE09_10015 PF00005 ABC transporter GNE09_10020 PF11728 Putative aromatic acid exporter C-terminal domain GNE09_10020 PF06081 Aromatic acid exporter family member 1 GNE09_10025 PF03734 L,D-transpeptidase catalytic domain GNE09_10040 PF13302 Acetyltransferase (GNAT) domain GNE09_10045 PF07687 Peptidase dimerisation domain GNE09_10045 PF01546 Peptidase family M20/M25/M40 GNE09_10050 PF00817 impB/mucB/samB family GNE09_10050 PF11798 IMS family HHH motif GNE09_10050 PF11799 impB/mucB/samB family C-terminal domain GNE09_10055 PF02308 MgtC family GNE09_10060 PF00690 Cation transporter/ATPase, N-terminus GNE09_10060 PF00689 Cation transporting ATPase, C-terminus GNE09_10075 PF12706 Beta-lactamase superfamily domain GNE09_10075 PF00753 Metallo-beta-lactamase superfamily GNE09_10085 PF03315 Serine dehydratase beta chain GNE09_10085 PF01842 ACT domain GNE09_10090 PF03313 Serine dehydratase alpha chain GNE09_10095 PF03807 NADP oxidoreductase coenzyme F420-dependent GNE09_10095 PF14748 Pyrroline-5-carboxylate reductase dimerisation GNE09_10100 PF00753 Metallo-beta-lactamase superfamily GNE09_10105 PF00106 short chain dehydrogenase GNE09_10115 PF02774 Semialdehyde dehydrogenase, dimerisation domain GNE09_10115 PF01118 Semialdehyde dehydrogenase, NAD binding domain GNE09_10120 PF01960 ArgJ family GNE09_10125 PF00696 Amino acid kinase family GNE09_10135 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain GNE09_10135 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain GNE09_10150 PF13404 AsnC-type helix-turn-helix domain GNE09_10150 PF01037 Lrp/AsnC ligand binding domain GNE09_10160 PF02872 5'-nucleotidase, C-terminal domain GNE09_10160 PF00149 Calcineurin-like phosphoesterase GNE09_10175 PF00202 Aminotransferase class-III GNE09_10185 PF00155 Aminotransferase class I and II GNE09_10190 PF08241 Methyltransferase domain GNE09_10190 PF12697 Alpha/beta hydrolase family GNE09_10195 PF13847 Methyltransferase domain GNE09_10200 PF06968 Biotin and Thiamin Synthesis associated domain GNE09_10200 PF04055 Radical SAM superfamily GNE09_10210 PF00885 6,7-dimethyl-8-ribityllumazine synthase GNE09_10215 PF00925 GTP cyclohydrolase II GNE09_10215 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase GNE09_10220 PF00677 Lumazine binding domain GNE09_10225 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region GNE09_10225 PF01872 RibD C-terminal domain GNE09_10235 PF10827 Protein of unknown function (DUF2552) GNE09_10240 PF12146 Serine aminopeptidase, S33 GNE09_10245 PF00583 Acetyltransferase (GNAT) family GNE09_10250 PF00356 Bacterial regulatory proteins, lacI family GNE09_10255 PF13726 Na+-H+ antiporter family GNE09_10255 PF03553 Na+/H+ antiporter family GNE09_10270 PF00565 Staphylococcal nuclease homologue GNE09_10270 PF00746 LPXTG cell wall anchor motif GNE09_10270 PF02872 5'-nucleotidase, C-terminal domain GNE09_10270 PF00149 Calcineurin-like phosphoesterase GNE09_10280 PF04229 GrpB protein GNE09_10280 PF13673 Acetyltransferase (GNAT) domain GNE09_10285 PF00248 Aldo/keto reductase family GNE09_10290 PF00248 Aldo/keto reductase family GNE09_10295 PF13072 Mother cell inhibitor of FtsZ GNE09_10300 PF00293 NUDIX domain GNE09_10310 PF01944 Stage II sporulation protein M GNE09_10315 PF01475 Ferric uptake regulator family GNE09_10320 PF14004 Protein of unknown function (DUF4227) GNE09_10325 PF00589 Phage integrase family GNE09_10325 PF02899 Phage integrase, N-terminal SAM-like domain GNE09_10330 PF13115 YtkA-like GNE09_10335 PF01676 Metalloenzyme superfamily GNE09_10340 PF01048 Phosphorylase superfamily GNE09_10345 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain GNE09_10345 PF02885 Glycosyl transferase family, helical bundle domain GNE09_10345 PF00591 Glycosyl transferase family, a/b domain GNE09_10350 PF01544 CorA-like Mg2+ transporter protein GNE09_10355 PF00860 Permease family GNE09_10365 PF01047 MarR family GNE09_10385 PF00005 ABC transporter GNE09_10390 PF00392 Bacterial regulatory proteins, gntR family GNE09_10395 PF00768 D-alanyl-D-alanine carboxypeptidase GNE09_10395 PF07943 Penicillin-binding protein 5, C-terminal domain GNE09_10400 PF01740 STAS domain GNE09_10405 PF13581 Histidine kinase-like ATPase domain GNE09_10410 PF04539 Sigma-70 region 3 GNE09_10410 PF04545 Sigma-70, region 4 GNE09_10410 PF04542 Sigma-70 region 2 GNE09_10415 PF00209 Sodium:neurotransmitter symporter family GNE09_10425 PF12164 Stage V sporulation protein AA GNE09_10430 PF13782 Stage V sporulation protein AB GNE09_10435 PF03862 SpoVAC/SpoVAEB sporulation membrane protein GNE09_10440 PF07451 Stage V sporulation protein AD (SpoVAD) GNE09_10445 PF03862 SpoVAC/SpoVAEB sporulation membrane protein GNE09_10450 PF14097 Stage V sporulation protein AE1 GNE09_10455 PF03323 Bacillus/Clostridium GerA spore germination protein GNE09_10465 PF06207 Protein of unknown function (DUF1002) GNE09_10470 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD GNE09_10475 PF00583 Acetyltransferase (GNAT) family GNE09_10480 PF03745 Domain of unknown function (DUF309) GNE09_10490 PF02616 Segregation and condensation protein ScpA GNE09_10505 PF01979 Amidohydrolase family GNE09_10510 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase GNE09_10525 PF00874 PRD domain GNE09_10525 PF03123 CAT RNA binding domain GNE09_10530 PF02378 Phosphotransferase system, EIIC GNE09_10530 PF00367 phosphotransferase system, EIIB GNE09_10530 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 GNE09_10535 PF00381 PTS HPr component phosphorylation site GNE09_10540 PF02896 PEP-utilising enzyme, TIM barrel domain GNE09_10540 PF00391 PEP-utilising enzyme, mobile domain GNE09_10540 PF05524 PEP-utilising enzyme, N-terminal GNE09_10560 PF00990 Diguanylate cyclase, GGDEF domain GNE09_10565 PF00144 Beta-lactamase GNE09_10570 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase GNE09_10570 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase GNE09_10585 PF03079 ARD/ARD' family GNE09_10590 PF00596 Class II Aldolase and Adducin N-terminal domain GNE09_10600 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain GNE09_10600 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain GNE09_10605 PF00155 Aminotransferase class I and II GNE09_10610 PF00795 Carbon-nitrogen hydrolase GNE09_10615 PF01636 Phosphotransferase enzyme family GNE09_10635 PF03551 Transcriptional regulator PadR-like family GNE09_10660 PF00293 NUDIX domain GNE09_10665 PF02803 Thiolase, C-terminal domain GNE09_10665 PF00108 Thiolase, N-terminal domain GNE09_10705 PF17912 MalK OB fold domain GNE09_10705 PF03459 TOBE domain GNE09_10705 PF00005 ABC transporter GNE09_10710 PF16657 Maltogenic Amylase, C-terminal domain GNE09_10710 PF00128 Alpha amylase, catalytic domain GNE09_10715 PF02903 Alpha amylase, N-terminal ig-like domain GNE09_10715 PF16657 Maltogenic Amylase, C-terminal domain GNE09_10715 PF00128 Alpha amylase, catalytic domain GNE09_10720 PF13416 Bacterial extracellular solute-binding protein GNE09_10725 PF00528 Binding-protein-dependent transport system inner membrane component GNE09_10730 PF00528 Binding-protein-dependent transport system inner membrane component GNE09_10735 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family GNE09_10735 PF00356 Bacterial regulatory proteins, lacI family GNE09_10740 PF00155 Aminotransferase class I and II GNE09_10750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNE09_10750 PF00512 His Kinase A (phospho-acceptor) domain GNE09_10760 PF14040 Deoxyribonuclease NucA/NucB GNE09_10770 PF08267 Cobalamin-independent synthase, N-terminal domain GNE09_10770 PF01717 Cobalamin-independent synthase, Catalytic domain GNE09_10780 PF07690 Major Facilitator Superfamily GNE09_10805 PF14177 YkyB-like protein GNE09_10810 PF02541 Ppx/GppA phosphatase family GNE09_10815 PF13089 Polyphosphate kinase N-terminal domain GNE09_10815 PF02503 Polyphosphate kinase middle domain GNE09_10815 PF17941 Polyphosphate kinase C-terminal domain 1 GNE09_10815 PF13090 Polyphosphate kinase C-terminal domain 2 GNE09_10825 PF10518 TAT (twin-arginine translocation) pathway signal sequence GNE09_10825 PF00149 Calcineurin-like phosphoesterase GNE09_10835 PF10388 EAL-domain associated signalling protein domain GNE09_10835 PF00563 EAL domain GNE09_10850 PF08796 Protein of unknown function (DUF1797) GNE09_10855 PF04308 Ribonuclease H-like GNE09_10870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GNE09_10870 PF03466 LysR substrate binding domain GNE09_10875 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal GNE09_10875 PF14602 Hexapeptide repeat of succinyl-transferase GNE09_10875 PF00132 Bacterial transferase hexapeptide (six repeats) GNE09_10880 PF07687 Peptidase dimerisation domain GNE09_10880 PF01546 Peptidase family M20/M25/M40 GNE09_10890 PF02080 TrkA-C domain GNE09_10890 PF02254 TrkA-N domain GNE09_10895 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain GNE09_10895 PF17770 Ribonuclease J C-terminal domain GNE09_10895 PF00753 Metallo-beta-lactamase superfamily GNE09_10910 PF01327 Polypeptide deformylase GNE09_10920 PF00676 Dehydrogenase E1 component GNE09_10925 PF02780 Transketolase, C-terminal domain GNE09_10925 PF02779 Transketolase, pyrimidine binding domain GNE09_10930 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) GNE09_10930 PF00364 Biotin-requiring enzyme GNE09_10930 PF02817 e3 binding domain GNE09_10935 PF07992 Pyridine nucleotide-disulphide oxidoreductase GNE09_10935 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GNE09_10980 PF05256 Uncharacterised protein family (UPF0223) GNE09_10985 PF06335 Protein of unknown function (DUF1054) GNE09_10995 PF00459 Inositol monophosphatase family GNE09_11020 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) GNE09_11030 PF02562 PhoH-like protein GNE09_11030 PF13638 PIN domain GNE09_11040 PF07408 Protein of unknown function (DUF1507) GNE09_11045 PF01098 Cell cycle protein GNE09_11050 PF02785 Biotin carboxylase C-terminal domain GNE09_11050 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GNE09_11050 PF00682 HMGL-like GNE09_11050 PF02436 Conserved carboxylase domain GNE09_11050 PF00289 Biotin carboxylase, N-terminal domain GNE09_11050 PF00364 Biotin-requiring enzyme GNE09_11055 PF02628 Cytochrome oxidase assembly protein GNE09_11060 PF01040 UbiA prenyltransferase family GNE09_11065 PF00116 Cytochrome C oxidase subunit II, periplasmic domain GNE09_11065 PF02790 Cytochrome C oxidase subunit II, transmembrane domain GNE09_11065 PF00034 Cytochrome c GNE09_11070 PF00115 Cytochrome C and Quinol oxidase polypeptide I GNE09_11075 PF00510 Cytochrome c oxidase subunit III GNE09_11080 PF03626 Prokaryotic Cytochrome C oxidase subunit IV GNE09_11085 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) GNE09_11090 PF00795 Carbon-nitrogen hydrolase GNE09_11095 PF08868 YugN-like family GNE09_11100 PF14504 CAP-associated N-terminal GNE09_11100 PF00188 Cysteine-rich secretory protein family GNE09_11105 PF14071 Putative coat protein GNE09_11110 PF14003 YlbE-like protein GNE09_11115 PF00300 Histidine phosphatase superfamily (branch 1) GNE09_11120 PF06133 Control of competence regulator ComK, YlbF/YmcA GNE09_11125 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) GNE09_11145 PF01467 Cytidylyltransferase-like GNE09_11150 PF07670 Nucleoside recognition GNE09_11155 PF01734 Patatin-like phospholipase GNE09_11160 PF05362 Lon protease (S16) C-terminal proteolytic domain GNE09_11160 PF13180 PDZ domain GNE09_11170 PF02620 Large ribosomal RNA subunit accumulation protein YceD GNE09_11175 PF01783 Ribosomal L32p protein family GNE09_11195 PF10079 Bacillithiol biosynthesis BshC GNE09_11200 PF01795 MraW methylase family GNE09_11205 PF04977 Septum formation initiator GNE09_11220 PF02875 Mur ligase family, glutamate ligase domain GNE09_11220 PF08245 Mur ligase middle domain GNE09_11220 PF01225 Mur ligase family, catalytic domain GNE09_11225 PF00953 Glycosyl transferase family 4 GNE09_11225 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 GNE09_11230 PF08245 Mur ligase middle domain GNE09_11230 PF02875 Mur ligase family, glutamate ligase domain GNE09_11235 PF01098 Cell cycle protein GNE09_11240 PF04101 Glycosyltransferase family 28 C-terminal domain GNE09_11240 PF03033 Glycosyltransferase family 28 N-terminal domain GNE09_11245 PF01565 FAD binding domain GNE09_11245 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain GNE09_11250 PF08478 POTRA domain, FtsQ-type GNE09_11250 PF03799 Cell division protein FtsQ GNE09_11255 PF02491 SHS2 domain inserted in FTSA GNE09_11260 PF12327 FtsZ family, C-terminal domain GNE09_11260 PF00091 Tubulin/FtsZ family, GTPase domain GNE09_11265 PF03419 Sporulation factor SpoIIGA GNE09_11270 PF04542 Sigma-70 region 2 GNE09_11270 PF04545 Sigma-70, region 4 GNE09_11275 PF04545 Sigma-70, region 4 GNE09_11275 PF04542 Sigma-70 region 2 GNE09_11275 PF04539 Sigma-70 region 3 GNE09_11280 PF05239 PRC-barrel domain GNE09_11290 PF01168 Alanine racemase, N-terminal domain GNE09_11295 PF04472 Cell division protein SepF GNE09_11300 PF02325 YGGT family GNE09_11305 PF17774 Putative RNA-binding domain in YlmH GNE09_11305 PF01479 S4 domain GNE09_11310 PF05103 DivIVA protein GNE09_11315 PF08264 Anticodon-binding domain of tRNA GNE09_11315 PF00133 tRNA synthetases class I (I, L, M and V) GNE09_11315 PF06827 Zinc finger found in FPG and IleRS GNE09_11325 PF01252 Signal peptidase (SPase) II GNE09_11330 PF00849 RNA pseudouridylate synthase GNE09_11330 PF01479 S4 domain GNE09_11335 PF00156 Phosphoribosyl transferase domain GNE09_11340 PF00860 Permease family GNE09_11345 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain GNE09_11345 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain GNE09_11350 PF01979 Amidohydrolase family GNE09_11355 PF00117 Glutamine amidotransferase class-I GNE09_11355 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain GNE09_11360 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GNE09_11360 PF02142 MGS-like domain GNE09_11360 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain GNE09_11365 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B GNE09_11365 PF00970 Oxidoreductase FAD-binding domain GNE09_11370 PF01180 Dihydroorotate dehydrogenase GNE09_11375 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family GNE09_11380 PF00156 Phosphoribosyl transferase domain GNE09_11420 PF00690 Cation transporter/ATPase, N-terminus GNE09_11420 PF00689 Cation transporting ATPase, C-terminus GNE09_11425 PF08340 Domain of unknown function (DUF1732) GNE09_11425 PF03755 YicC-like family, N-terminal region GNE09_11430 PF04025 Domain of unknown function (DUF370) GNE09_11435 PF00625 Guanylate kinase GNE09_11440 PF01192 RNA polymerase Rpb6 GNE09_11445 PF02441 Flavoprotein GNE09_11445 PF04127 DNA / pantothenate metabolism flavoprotein GNE09_11450 PF17764 3′ DNA-binding domain (3′BD) GNE09_11450 PF18319 PriA DNA helicase Cys-rich region (CRR) domain GNE09_11450 PF00271 Helicase conserved C-terminal domain GNE09_11450 PF04851 Type III restriction enzyme, res subunit GNE09_11450 PF18074 Primosomal protein N C-terminal domain GNE09_11455 PF01327 Polypeptide deformylase GNE09_11465 PF01189 16S rRNA methyltransferase RsmB/F GNE09_11465 PF01029 NusB family GNE09_11470 PF04055 Radical SAM superfamily GNE09_11480 PF03793 PASTA domain GNE09_11480 PF00069 Protein kinase domain GNE09_11485 PF16745 RsgA N-terminal domain GNE09_11485 PF03193 RsgA GTPase GNE09_11490 PF00834 Ribulose-phosphate 3 epimerase family GNE09_11495 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain GNE09_11495 PF04263 Thiamin pyrophosphokinase, catalytic domain GNE09_11500 PF08183 Stage V sporulation protein family GNE09_11505 PF00830 Ribosomal L28 family GNE09_11510 PF03780 Asp23 family, cell envelope-related function GNE09_11515 PF02734 DAK2 domain GNE09_11515 PF13684 Dihydroxyacetone kinase family GNE09_11530 PF02504 Fatty acid synthesis protein GNE09_11535 PF00698 Acyl transferase domain GNE09_11545 PF00550 Phosphopantetheine attachment site GNE09_11550 PF14622 Ribonuclease-III-like GNE09_11550 PF00035 Double-stranded RNA binding motif GNE09_11555 PF02463 RecF/RecN/SMC N terminal domain GNE09_11555 PF06470 SMC proteins Flexible Hinge Domain GNE09_11560 PF00448 SRP54-type protein, GTPase domain GNE09_11560 PF02881 SRP54-type protein, helical bundle domain GNE09_11565 PF04297 Putative helix-turn-helix protein, YlxM / p13 like GNE09_11575 PF00886 Ribosomal protein S16 GNE09_11585 PF05239 PRC-barrel domain GNE09_11585 PF01782 RimM N-terminal domain GNE09_11590 PF01746 tRNA (Guanine-1)-methyltransferase GNE09_11595 PF01245 Ribosomal protein L19 GNE09_11600 PF10502 Signal peptidase, peptidase S26 GNE09_11605 PF01926 50S ribosome-binding GTPase GNE09_11610 PF01351 Ribonuclease HII GNE09_11615 PF08442 ATP-grasp domain GNE09_11615 PF00549 CoA-ligase GNE09_11620 PF00549 CoA-ligase GNE09_11620 PF02629 CoA binding domain GNE09_11625 PF02481 DNA recombination-mediator protein A GNE09_11630 PF01751 Toprim domain GNE09_11630 PF01396 Topoisomerase DNA binding C4 zinc finger GNE09_11630 PF01131 DNA topoisomerase GNE09_11635 PF01134 Glucose inhibited division protein A GNE09_11645 PF00227 Proteasome subunit GNE09_11655 PF08222 CodY helix-turn-helix domain GNE09_11655 PF06018 CodY GAF-like domain GNE09_11660 PF00318 Ribosomal protein S2 GNE09_11665 PF00889 Elongation factor TS GNE09_11670 PF00696 Amino acid kinase family GNE09_11675 PF01765 Ribosome recycling factor GNE09_11680 PF01255 Putative undecaprenyl diphosphate synthase GNE09_11690 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase GNE09_11690 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain GNE09_11690 PF13288 DXP reductoisomerase C-terminal domain GNE09_11695 PF17820 PDZ domain GNE09_11695 PF02163 Peptidase family M50 GNE09_11700 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GNE09_11700 PF04073 Aminoacyl-tRNA editing domain GNE09_11700 PF03129 Anticodon binding domain GNE09_11705 PF00929 Exonuclease GNE09_11705 PF02811 PHP domain GNE09_11705 PF14579 Helix-hairpin-helix motif GNE09_11705 PF17657 Bacterial DNA polymerase III alpha subunit finger domain GNE09_11705 PF07733 Bacterial DNA polymerase III alpha NTPase domain GNE09_11705 PF11490 DNA polymerase III polC-type N-terminus II GNE09_11705 PF14480 DNA polymerase III polC-type N-terminus I GNE09_11710 PF17384 RimP C-terminal SH3 domain GNE09_11710 PF02576 RimP N-terminal domain GNE09_11715 PF00575 S1 RNA binding domain GNE09_11715 PF08529 NusA N-terminal domain GNE09_11715 PF13184 NusA-like KH domain GNE09_11720 PF04296 Protein of unknown function (DUF448) GNE09_11725 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family GNE09_11730 PF11987 Translation-initiation factor 2 GNE09_11730 PF00009 Elongation factor Tu GTP binding domain GNE09_11730 PF04760 Translation initiation factor IF-2, N-terminal region GNE09_11735 PF04456 Protein of unknown function (DUF503) GNE09_11740 PF02033 Ribosome-binding factor A GNE09_11745 PF01509 TruB family pseudouridylate synthase (N terminal domain) GNE09_11745 PF16198 tRNA pseudouridylate synthase B C-terminal domain GNE09_11750 PF01687 Riboflavin kinase GNE09_11750 PF06574 FAD synthetase GNE09_11755 PF00312 Ribosomal protein S15 GNE09_11760 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain GNE09_11760 PF00013 KH domain GNE09_11760 PF01138 3' exoribonuclease family, domain 1 GNE09_11760 PF03725 3' exoribonuclease family, domain 2 GNE09_11760 PF00575 S1 RNA binding domain GNE09_11765 PF01522 Polysaccharide deacetylase GNE09_11770 PF00675 Insulinase (Peptidase family M16) GNE09_11770 PF05193 Peptidase M16 inactive domain GNE09_11775 PF05239 PRC-barrel domain GNE09_11780 PF01262 Alanine dehydrogenase/PNT, C-terminal domain GNE09_11780 PF16924 Dipicolinate synthase subunit A N-terminal domain GNE09_11785 PF02441 Flavoprotein GNE09_11790 PF02774 Semialdehyde dehydrogenase, dimerisation domain GNE09_11790 PF01118 Semialdehyde dehydrogenase, NAD binding domain GNE09_11795 PF13840 ACT domain GNE09_11795 PF00696 Amino acid kinase family GNE09_11800 PF00701 Dihydrodipicolinate synthetase family GNE09_11805 PF00753 Metallo-beta-lactamase superfamily GNE09_11805 PF17770 Ribonuclease J C-terminal domain GNE09_11805 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain GNE09_11810 PF00574 Clp protease GNE09_11815 PF14035 YlzJ-like protein GNE09_11820 PF01580 FtsK/SpoIIIE family GNE09_11820 PF09397 Ftsk gamma domain GNE09_11820 PF17854 FtsK alpha domain GNE09_11825 PF07702 UTRA domain GNE09_11825 PF00392 Bacterial regulatory proteins, gntR family GNE09_11850 PF05193 Peptidase M16 inactive domain GNE09_11855 PF05193 Peptidase M16 inactive domain GNE09_11855 PF00675 Insulinase (Peptidase family M16) GNE09_11865 PF11588 Protein of unknown function (DUF3243) GNE09_11870 PF11868 Protein of unknown function (DUF3388) GNE09_11875 PF13464 Domain of unknown function (DUF4115) GNE09_11880 PF01066 CDP-alcohol phosphatidyltransferase GNE09_11885 PF00994 Probable molybdopterin binding domain GNE09_11885 PF02464 Competence-damaged protein GNE09_11885 PF18146 Damage-inducible protein CinA KH domain GNE09_11890 PF00154 recA bacterial DNA recombination protein GNE09_11895 PF12072 Domain of unknown function (DUF3552) GNE09_11895 PF01966 HD domain GNE09_11895 PF00013 KH domain GNE09_11900 PF13277 YmdB-like protein GNE09_11905 PF04232 Stage V sporulation protein S (SpoVS) GNE09_11910 PF01244 Membrane dipeptidase (Peptidase family M19) GNE09_11915 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg GNE09_11915 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase GNE09_11915 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II GNE09_11920 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GNE09_11925 PF04055 Radical SAM superfamily GNE09_11925 PF01938 TRAM domain GNE09_11925 PF00919 Uncharacterized protein family UPF0004 GNE09_11930 PF06133 Control of competence regulator ComK, YlbF/YmcA GNE09_11935 PF10628 Outer spore coat protein E (CotE) GNE09_11940 PF05190 MutS family domain IV GNE09_11940 PF05188 MutS domain II GNE09_11940 PF05192 MutS domain III GNE09_11940 PF00488 MutS domain V GNE09_11940 PF01624 MutS domain I GNE09_11945 PF08676 MutL C terminal dimerisation domain GNE09_11945 PF01119 DNA mismatch repair protein, C-terminal domain GNE09_11955 PF00350 Dynamin family GNE09_11970 PF07486 Cell Wall Hydrolase GNE09_11980 PF00388 Phosphatidylinositol-specific phospholipase C, X domain GNE09_11985 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GNE09_11985 PF00672 HAMP domain GNE09_12000 PF00155 Aminotransferase class I and II GNE09_12000 PF00392 Bacterial regulatory proteins, gntR family GNE09_12005 PF03788 LrgA family GNE09_12010 PF04172 LrgB-like family GNE09_12025 PF02719 Polysaccharide biosynthesis protein GNE09_12025 PF08485 Polysaccharide biosynthesis protein C-terminal GNE09_12030 PF16363 GDP-mannose 4,6 dehydratase GNE09_12040 PF03033 Glycosyltransferase family 28 N-terminal domain GNE09_12040 PF04101 Glycosyltransferase family 28 C-terminal domain GNE09_12050 PF00561 alpha/beta hydrolase fold GNE09_12070 PF07687 Peptidase dimerisation domain GNE09_12070 PF01546 Peptidase family M20/M25/M40 GNE09_12075 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain GNE09_12075 PF00730 HhH-GPD superfamily base excision DNA repair protein GNE09_12080 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain GNE09_12080 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain GNE09_12085 PF12833 Helix-turn-helix domain GNE09_12085 PF02805 Metal binding domain of Ada GNE09_12090 PF03372 Endonuclease/Exonuclease/phosphatase family GNE09_12095 PF01497 Periplasmic binding protein GNE09_12100 PF01032 FecCD transport family GNE09_12105 PF01032 FecCD transport family GNE09_12110 PF00005 ABC transporter GNE09_12115 PF00756 Putative esterase GNE09_12135 PF02583 Metal-sensitive transcriptional repressor GNE09_12140 PF00403 Heavy-metal-associated domain GNE09_12145 PF00403 Heavy-metal-associated domain GNE09_12155 PF00216 Bacterial DNA-binding protein GNE09_12160 PF01226 Formate/nitrite transporter GNE09_12165 PF00149 Calcineurin-like phosphoesterase GNE09_12165 PF10518 TAT (twin-arginine translocation) pathway signal sequence GNE09_12180 PF00324 Amino acid permease GNE09_12190 PF04238 Protein of unknown function (DUF420) GNE09_12195 PF00465 Iron-containing alcohol dehydrogenase GNE09_12200 PF00455 DeoR C terminal sensor domain GNE09_12200 PF08220 DeoR-like helix-turn-helix domain GNE09_12205 PF00294 pfkB family carbohydrate kinase GNE09_12210 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GNE09_12210 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GNE09_12215 PF01476 LysM domain GNE09_12215 PF06725 3D domain GNE09_12230 PF17209 Hfq protein GNE09_12245 PF17866 AAA lid domain GNE09_12245 PF00004 ATPase family associated with various cellular activities (AAA) GNE09_12250 PF03458 UPF0126 domain GNE09_12255 PF13167 GTP-binding GTPase N-terminal GNE09_12255 PF16360 GTP-binding GTPase Middle Region GNE09_12255 PF01926 50S ribosome-binding GTPase GNE09_12260 PF06838 Methionine gamma-lyase GNE09_12265 PF13411 MerR HTH family regulatory protein GNE09_12270 PF03951 Glutamine synthetase, beta-Grasp domain GNE09_12270 PF00120 Glutamine synthetase, catalytic domain GNE09_12275 PF03551 Transcriptional regulator PadR-like family GNE09_12290 PF01726 LexA DNA binding domain GNE09_12290 PF00717 Peptidase S24-like GNE09_12295 PF00239 Resolvase, N terminal domain GNE09_12300 PF05979 Bacterial protein of unknown function (DUF896) GNE09_12305 PF02872 5'-nucleotidase, C-terminal domain GNE09_12305 PF00149 Calcineurin-like phosphoesterase GNE09_12315 PF00005 ABC transporter GNE09_12320 PF00528 Binding-protein-dependent transport system inner membrane component GNE09_12325 PF00528 Binding-protein-dependent transport system inner membrane component GNE09_12330 PF02780 Transketolase, C-terminal domain GNE09_12330 PF02779 Transketolase, pyrimidine binding domain GNE09_12330 PF00456 Transketolase, thiamine diphosphate binding domain GNE09_12335 PF10747 Sporulation inhibitor of replication protein SirA GNE09_12340 PF03672 Uncharacterised protein family (UPF0154) GNE09_12345 PF00005 ABC transporter GNE09_12345 PF00664 ABC transporter transmembrane region GNE09_12350 PF00005 ABC transporter GNE09_12350 PF00664 ABC transporter transmembrane region GNE09_12355 PF08239 Bacterial SH3 domain GNE09_12355 PF01183 Glycosyl hydrolases family 25 GNE09_12375 PF01925 Sulfite exporter TauE/SafE GNE09_12385 PF13344 Haloacid dehalogenase-like hydrolase GNE09_12385 PF00293 NUDIX domain GNE09_12390 PF04172 LrgB-like family GNE09_12395 PF03788 LrgA family GNE09_12400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GNE09_12400 PF03466 LysR substrate binding domain GNE09_12420 PF00005 ABC transporter GNE09_12440 PF02683 Cytochrome C biogenesis protein transmembrane region GNE09_12445 PF07301 Protein of unknown function (DUF1453) GNE09_12450 PF11084 Protein of unknown function (DUF2621) GNE09_12470 PF01209 ubiE/COQ5 methyltransferase family GNE09_12475 PF09021 HutP GNE09_12480 PF00221 Aromatic amino acid lyase GNE09_12485 PF17392 Urocanase C-terminal domain GNE09_12485 PF01175 Urocanase Rossmann-like domain GNE09_12485 PF17391 Urocanase N-terminal domain GNE09_12490 PF01979 Amidohydrolase family GNE09_12495 PF00491 Arginase family GNE09_12500 PF02559 CarD-like/TRCF domain GNE09_12505 PF00724 NADH:flavin oxidoreductase / NADH oxidase family GNE09_12510 PF01645 Conserved region in glutamate synthase GNE09_12520 PF00474 Sodium:solute symporter family GNE09_12525 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GNE09_12530 PF01738 Dienelactone hydrolase family GNE09_12535 PF00989 PAS fold GNE09_12535 PF13188 PAS domain GNE09_12535 PF00512 His Kinase A (phospho-acceptor) domain GNE09_12535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNE09_12535 PF13426 PAS domain GNE09_12545 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 GNE09_12545 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) GNE09_12565 PF05532 CsbD-like GNE09_12585 PF00501 AMP-binding enzyme GNE09_12585 PF13193 AMP-binding enzyme C-terminal domain GNE09_12590 PF02632 BioY family GNE09_12595 PF00501 AMP-binding enzyme GNE09_12595 PF13193 AMP-binding enzyme C-terminal domain GNE09_12600 PF00108 Thiolase, N-terminal domain GNE09_12600 PF02803 Thiolase, C-terminal domain GNE09_12610 PF00293 NUDIX domain GNE09_12610 PF13344 Haloacid dehalogenase-like hydrolase GNE09_12615 PF02272 DHHA1 domain GNE09_12615 PF01411 tRNA synthetases class II (A) GNE09_12615 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain GNE09_12625 PF07690 Major Facilitator Superfamily GNE09_12635 PF08179 Small acid-soluble spore protein P family GNE09_12645 PF01522 Polysaccharide deacetylase GNE09_12655 PF00330 Aconitase family (aconitate hydratase) GNE09_12655 PF00694 Aconitase C-terminal domain GNE09_12670 PF00578 AhpC/TSA family GNE09_12675 PF02811 PHP domain GNE09_12675 PF14579 Helix-hairpin-helix motif GNE09_12675 PF11490 DNA polymerase III polC-type N-terminus II GNE09_12675 PF07733 Bacterial DNA polymerase III alpha NTPase domain GNE09_12675 PF17657 Bacterial DNA polymerase III alpha subunit finger domain GNE09_12675 PF00929 Exonuclease GNE09_12675 PF01336 OB-fold nucleic acid binding domain GNE09_12680 PF13040 Fur-regulated basic protein B GNE09_12685 PF08177 Small acid-soluble spore protein N family GNE09_12690 PF01476 LysM domain GNE09_12690 PF00704 Glycosyl hydrolases family 18 GNE09_12695 PF03061 Thioesterase superfamily GNE09_12700 PF01521 Iron-sulphur cluster biosynthesis GNE09_12705 PF02660 Glycerol-3-phosphate acyltransferase GNE09_12710 PF03477 ATP cone domain GNE09_12710 PF13597 Anaerobic ribonucleoside-triphosphate reductase GNE09_12720 PF00486 Transcriptional regulatory protein, C terminal GNE09_12720 PF00072 Response regulator receiver domain GNE09_12725 PF13180 PDZ domain GNE09_12730 PF13380 CoA binding domain GNE09_12735 PF00204 DNA gyrase B GNE09_12735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNE09_12735 PF01751 Toprim domain GNE09_12735 PF00986 DNA gyrase B subunit, carboxyl terminus GNE09_12740 PF00521 DNA gyrase/topoisomerase IV, subunit A GNE09_12740 PF03989 DNA gyrase C-terminal domain, beta-propeller GNE09_12745 PF01408 Oxidoreductase family, NAD-binding Rossmann fold GNE09_12745 PF02894 Oxidoreductase family, C-terminal alpha/beta domain GNE09_12765 PF00005 ABC transporter GNE09_12765 PF13732 Domain of unknown function (DUF4162) GNE09_12775 PF04542 Sigma-70 region 2 GNE09_12775 PF08281 Sigma-70, region 4 GNE09_12785 PF03816 Cell envelope-related transcriptional attenuator domain GNE09_12790 PF00375 Sodium:dicarboxylate symporter family GNE09_12795 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GNE09_12805 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GNE09_12810 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GNE09_12815 PF08241 Methyltransferase domain GNE09_12860 PF03323 Bacillus/Clostridium GerA spore germination protein GNE09_12865 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region GNE09_12865 PF00037 4Fe-4S binding domain GNE09_12865 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GNE09_12865 PF01568 Molydopterin dinucleotide binding domain GNE09_12865 PF00384 Molybdopterin oxidoreductase GNE09_12870 PF07849 Protein of unknown function (DUF1641) GNE09_12875 PF10057 Uncharacterized conserved protein (DUF2294) GNE09_12880 PF02634 FdhD/NarQ family GNE09_12885 PF04055 Radical SAM superfamily GNE09_12885 PF06463 Molybdenum Cofactor Synthesis C GNE09_12890 PF01226 Formate/nitrite transporter GNE09_12895 PF00899 ThiF family GNE09_12905 PF02391 MoaE protein GNE09_12915 PF10609 NUBPL iron-transfer P-loop NTPase GNE09_12930 PF06961 Protein of unknown function (DUF1294) GNE09_12935 PF00892 EamA-like transporter family GNE09_12940 PF02681 Divergent PAP2 family GNE09_12945 PF13243 Squalene-hopene cyclase C-terminal domain GNE09_12945 PF13249 Squalene-hopene cyclase N-terminal domain GNE09_12950 PF14151 YfhD-like protein GNE09_12960 PF00171 Aldehyde dehydrogenase family GNE09_12970 PF00474 Sodium:solute symporter family GNE09_12975 PF01156 Inosine-uridine preferring nucleoside hydrolase GNE09_12985 PF14698 Argininosuccinate lyase C-terminal GNE09_12985 PF00206 Lyase GNE09_12995 PF00106 short chain dehydrogenase GNE09_13005 PF00132 Bacterial transferase hexapeptide (six repeats) GNE09_13015 PF00293 NUDIX domain GNE09_13025 PF00258 Flavodoxin GNE09_13035 PF00313 'Cold-shock' DNA-binding domain GNE09_13050 PF13037 Domain of unknown function (DUF3898) GNE09_13050 PF13039 Protein of unknown function (DUF3900) GNE09_13060 PF04294 VanW like protein GNE09_13065 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GNE09_13075 PF02308 MgtC family GNE09_13080 PF18496 Collagenase G catalytic helper subdomain GNE09_13080 PF01752 Collagenase GNE09_13080 PF08453 Peptidase family M9 N-terminal GNE09_13085 PF00989 PAS fold GNE09_13085 PF00512 His Kinase A (phospho-acceptor) domain GNE09_13085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNE09_13110 PF02557 D-alanyl-D-alanine carboxypeptidase GNE09_13115 PF01520 N-acetylmuramoyl-L-alanine amidase GNE09_13115 PF00395 S-layer homology domain GNE09_13120 PF07968 Leukocidin/Hemolysin toxin family GNE09_13125 PF00440 Bacterial regulatory proteins, tetR family GNE09_13135 PF03707 Bacterial signalling protein N terminal repeat GNE09_13135 PF00990 Diguanylate cyclase, GGDEF domain GNE09_13135 PF00563 EAL domain GNE09_13170 PF02743 Cache domain GNE09_13170 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GNE09_13170 PF00672 HAMP domain GNE09_13175 PF18801 response regulator aspartate phosphatase H, N terminal GNE09_13180 PF16363 GDP-mannose 4,6 dehydratase GNE09_13185 PF01370 NAD dependent epimerase/dehydratase family GNE09_13195 PF00483 Nucleotidyl transferase GNE09_13215 PF03323 Bacillus/Clostridium GerA spore germination protein GNE09_13225 PF18416 N-acetylglucosamine binding protein domain 2 GNE09_13225 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading GNE09_13230 PF00388 Phosphatidylinositol-specific phospholipase C, X domain GNE09_13240 PF00535 Glycosyl transferase family 2 GNE09_13245 PF00535 Glycosyl transferase family 2 GNE09_13250 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase GNE09_13255 PF02719 Polysaccharide biosynthesis protein GNE09_13255 PF08485 Polysaccharide biosynthesis protein C-terminal GNE09_13260 PF16363 GDP-mannose 4,6 dehydratase GNE09_13265 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family GNE09_13285 PF03102 NeuB family GNE09_13285 PF08666 SAF domain GNE09_13295 PF12996 DUF based on E. rectale Gene description (DUF3880) GNE09_13310 PF07992 Pyridine nucleotide-disulphide oxidoreductase GNE09_13330 PF01565 FAD binding domain GNE09_13330 PF02913 FAD linked oxidases, C-terminal domain GNE09_13335 PF01758 Sodium Bile acid symporter family GNE09_13355 PF00107 Zinc-binding dehydrogenase GNE09_13355 PF08240 Alcohol dehydrogenase GroES-like domain GNE09_13360 PF01022 Bacterial regulatory protein, arsR family GNE09_13365 PF01494 FAD binding domain GNE09_13370 PF03009 Glycerophosphoryl diester phosphodiesterase family GNE09_13380 PF03466 LysR substrate binding domain GNE09_13380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GNE09_13385 PF07690 Major Facilitator Superfamily GNE09_13395 PF00144 Beta-lactamase GNE09_13400 PF04371 Porphyromonas-type peptidyl-arginine deiminase GNE09_13405 PF06146 Phosphate-starvation-inducible E GNE09_13425 PF04371 Porphyromonas-type peptidyl-arginine deiminase GNE09_13430 PF08439 Oligopeptidase F GNE09_13430 PF01432 Peptidase family M3 GNE09_13435 PF00797 N-acetyltransferase GNE09_13440 PF00128 Alpha amylase, catalytic domain GNE09_13440 PF09154 Domain of unknown function (DUF1939) GNE09_13465 PF00107 Zinc-binding dehydrogenase GNE09_13465 PF08240 Alcohol dehydrogenase GroES-like domain GNE09_13470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GNE09_13470 PF03466 LysR substrate binding domain GNE09_13480 PF10901 Protein of unknown function (DUF2690) GNE09_13495 PF13170 Protein of unknown function (DUF4003) GNE09_13500 PF05675 Protein of unknown function (DUF817) GNE09_13505 PF01032 FecCD transport family GNE09_13510 PF01032 FecCD transport family GNE09_13515 PF01497 Periplasmic binding protein GNE09_13530 PF03600 Citrate transporter GNE09_13535 PF08830 Protein of unknown function (DUF1806) GNE09_13540 PF02585 GlcNAc-PI de-N-acetylase GNE09_13565 PF07690 Major Facilitator Superfamily GNE09_13570 PF00324 Amino acid permease GNE09_13575 PF00107 Zinc-binding dehydrogenase GNE09_13575 PF08240 Alcohol dehydrogenase GroES-like domain GNE09_13580 PF00753 Metallo-beta-lactamase superfamily GNE09_13640 PF03063 Prismane/CO dehydrogenase family GNE09_13660 PF13732 Domain of unknown function (DUF4162) GNE09_13660 PF00005 ABC transporter GNE09_13665 PF01061 ABC-2 type transporter GNE09_13685 PF04542 Sigma-70 region 2 GNE09_13690 PF12791 Anti-sigma factor N-terminus GNE09_13695 PF01522 Polysaccharide deacetylase GNE09_13695 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain GNE09_13700 PF01022 Bacterial regulatory protein, arsR family GNE09_13710 PF01494 FAD binding domain GNE09_13715 PF01638 HxlR-like helix-turn-helix GNE09_13735 PF02567 Phenazine biosynthesis-like protein GNE09_13780 PF01408 Oxidoreductase family, NAD-binding Rossmann fold GNE09_13780 PF02894 Oxidoreductase family, C-terminal alpha/beta domain GNE09_13785 PF00392 Bacterial regulatory proteins, gntR family GNE09_13785 PF07702 UTRA domain GNE09_13790 PF03960 ArsC family GNE09_13830 PF03928 Haem-degrading GNE09_13845 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase GNE09_13845 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain GNE09_13860 PF10282 Lactonase, 7-bladed beta-propeller GNE09_13865 PF06906 Protein of unknown function (DUF1272) GNE09_13870 PF00805 Pentapeptide repeats (8 copies) GNE09_13885 PF00892 EamA-like transporter family GNE09_13890 PF13411 MerR HTH family regulatory protein GNE09_13895 PF00571 CBS domain GNE09_13895 PF03471 Transporter associated domain GNE09_13895 PF01595 Cyclin M transmembrane N-terminal domain GNE09_13905 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) GNE09_13925 PF07690 Major Facilitator Superfamily GNE09_13935 PF08003 Protein of unknown function (DUF1698) GNE09_13965 PF01594 AI-2E family transporter GNE09_13970 PF13288 DXP reductoisomerase C-terminal domain GNE09_13970 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain GNE09_13970 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase GNE09_13975 PF00579 tRNA synthetases class I (W and Y) GNE09_13985 PF07690 Major Facilitator Superfamily GNE09_13990 PF00480 ROK family GNE09_13995 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GNE09_14005 PF00293 NUDIX domain GNE09_14025 PF13419 Haloacid dehalogenase-like hydrolase GNE09_14050 PF00005 ABC transporter GNE09_14080 PF00224 Pyruvate kinase, barrel domain GNE09_14080 PF02887 Pyruvate kinase, alpha/beta domain GNE09_14080 PF00391 PEP-utilising enzyme, mobile domain GNE09_14090 PF00881 Nitroreductase family GNE09_14095 PF01638 HxlR-like helix-turn-helix GNE09_14110 PF03129 Anticodon binding domain GNE09_14110 PF13393 Histidyl-tRNA synthetase GNE09_14115 PF04073 Aminoacyl-tRNA editing domain GNE09_14120 PF01048 Phosphorylase superfamily GNE09_14130 PF04231 Endonuclease I GNE09_14135 PF03606 C4-dicarboxylate anaerobic carrier GNE09_14160 PF00005 ABC transporter GNE09_14170 PF14256 YwiC-like protein GNE09_14190 PF02525 Flavodoxin-like fold GNE09_14200 PF02667 Short chain fatty acid transporter GNE09_14215 PF07690 Major Facilitator Superfamily GNE09_14220 PF01047 MarR family GNE09_14225 PF12697 Alpha/beta hydrolase family GNE09_14240 PF14044 NETI protein GNE09_14245 PF09587 Bacterial capsule synthesis protein PGA_cap GNE09_14250 PF02557 D-alanyl-D-alanine carboxypeptidase GNE09_14275 PF04740 LXG domain of WXG superfamily GNE09_14445 PF07690 Major Facilitator Superfamily GNE09_14450 PF08361 MAATS-type transcriptional repressor, C-terminal region GNE09_14450 PF00440 Bacterial regulatory proteins, tetR family GNE09_14455 PF01471 Putative peptidoglycan binding domain GNE09_14455 PF01510 N-acetylmuramoyl-L-alanine amidase GNE09_14455 PF01476 LysM domain GNE09_14470 PF01804 Penicillin amidase GNE09_14475 PF01497 Periplasmic binding protein GNE09_14475 PF12833 Helix-turn-helix domain GNE09_14480 PF07883 Cupin domain GNE09_14495 PF00266 Aminotransferase class-V GNE09_14500 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GNE09_14500 PF01842 ACT domain GNE09_14500 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GNE09_14525 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 GNE09_14525 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) GNE09_14530 PF04299 Putative FMN-binding domain GNE09_14535 PF00583 Acetyltransferase (GNAT) family GNE09_14540 PF01047 MarR family GNE09_14550 PF00486 Transcriptional regulatory protein, C terminal GNE09_14550 PF00072 Response regulator receiver domain GNE09_14555 PF00672 HAMP domain GNE09_14555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNE09_14555 PF00512 His Kinase A (phospho-acceptor) domain GNE09_14560 PF02687 FtsX-like permease family GNE09_14565 PF00005 ABC transporter GNE09_14580 PF04072 Leucine carboxyl methyltransferase GNE09_14590 PF01139 tRNA-splicing ligase RtcB GNE09_14600 PF00291 Pyridoxal-phosphate dependent enzyme GNE09_14620 PF00667 FAD binding domain GNE09_14620 PF00175 Oxidoreductase NAD-binding domain GNE09_14620 PF00258 Flavodoxin GNE09_14620 PF00067 Cytochrome P450 GNE09_14645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNE09_14645 PF00512 His Kinase A (phospho-acceptor) domain GNE09_14660 PF01565 FAD binding domain GNE09_14660 PF08031 Berberine and berberine like GNE09_14695 PF00672 HAMP domain GNE09_14695 PF00512 His Kinase A (phospho-acceptor) domain GNE09_14695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNE09_14700 PF00072 Response regulator receiver domain GNE09_14700 PF00486 Transcriptional regulatory protein, C terminal GNE09_14715 PF00144 Beta-lactamase GNE09_14725 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GNE09_14740 PF01037 Lrp/AsnC ligand binding domain GNE09_14750 PF18665 Tetracyclin repressor-like, C-terminal domain GNE09_14750 PF00440 Bacterial regulatory proteins, tetR family GNE09_14755 PF00550 Phosphopantetheine attachment site GNE09_14755 PF07993 Male sterility protein GNE09_14765 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit GNE09_14780 PF01022 Bacterial regulatory protein, arsR family GNE09_14785 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GNE09_14790 PF01758 Sodium Bile acid symporter family GNE09_14795 PF01451 Low molecular weight phosphotyrosine protein phosphatase GNE09_14815 PF00005 ABC transporter GNE09_14820 PF00950 ABC 3 transport family GNE09_14825 PF01297 Zinc-uptake complex component A periplasmic GNE09_14830 PF01040 UbiA prenyltransferase family GNE09_14840 PF01522 Polysaccharide deacetylase GNE09_14845 PF03323 Bacillus/Clostridium GerA spore germination protein GNE09_14850 PF05504 Spore germination B3/ GerAC like, C-terminal GNE09_14860 PF10057 Uncharacterized conserved protein (DUF2294) GNE09_14865 PF00361 Proton-conducting membrane transporter GNE09_14865 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus GNE09_14870 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) GNE09_14880 PF00875 DNA photolyase GNE09_14880 PF03441 FAD binding domain of DNA photolyase GNE09_14885 PF03073 TspO/MBR family GNE09_14900 PF13026 Protein of unknown function (DUF3887) GNE09_14900 PF12146 Serine aminopeptidase, S33 GNE09_14920 PF01544 CorA-like Mg2+ transporter protein GNE09_14925 PF01047 MarR family GNE09_14930 PF03466 LysR substrate binding domain GNE09_14930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GNE09_14935 PF01979 Amidohydrolase family GNE09_14950 PF00857 Isochorismatase family GNE09_14955 PF00561 alpha/beta hydrolase fold GNE09_14960 PF02872 5'-nucleotidase, C-terminal domain GNE09_14960 PF17936 Bacterial Ig domain GNE09_14960 PF00149 Calcineurin-like phosphoesterase GNE09_14970 PF00144 Beta-lactamase GNE09_14975 PF00067 Cytochrome P450 GNE09_14985 PF01235 Sodium:alanine symporter family GNE09_14990 PF04960 Glutaminase GNE09_14995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNE09_15000 PF08664 YcbB domain GNE09_15000 PF00072 Response regulator receiver domain GNE09_15005 PF03323 Bacillus/Clostridium GerA spore germination protein GNE09_15010 PF03845 Spore germination protein GNE09_15020 PF03807 NADP oxidoreductase coenzyme F420-dependent GNE09_15020 PF14748 Pyrroline-5-carboxylate reductase dimerisation GNE09_15025 PF13520 Amino acid permease GNE09_15035 PF00269 Small, acid-soluble spore proteins, alpha/beta type GNE09_15060 PF05791 Bacillus haemolytic enterotoxin (HBL) GNE09_15065 PF05791 Bacillus haemolytic enterotoxin (HBL) GNE09_15070 PF13426 PAS domain GNE09_15070 PF00989 PAS fold GNE09_15070 PF00512 His Kinase A (phospho-acceptor) domain GNE09_15070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNE09_15070 PF13188 PAS domain GNE09_15075 PF03323 Bacillus/Clostridium GerA spore germination protein GNE09_15100 PF01381 Helix-turn-helix GNE09_15105 PF00710 Asparaginase, N-terminal GNE09_15105 PF17763 Glutaminase/Asparaginase C-terminal domain GNE09_15110 PF00206 Lyase GNE09_15110 PF10415 Fumarase C C-terminus GNE09_15120 PF13823 Alcohol dehydrogenase GroES-associated GNE09_15120 PF00107 Zinc-binding dehydrogenase GNE09_15120 PF08240 Alcohol dehydrogenase GroES-like domain GNE09_15125 PF00269 Small, acid-soluble spore proteins, alpha/beta type GNE09_15130 PF11553 Protein of unknown function (DUF3231) GNE09_15135 PF10710 Protein of unknown function (DUF2512) GNE09_15140 PF00753 Metallo-beta-lactamase superfamily GNE09_15145 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain GNE09_15145 PF00391 PEP-utilising enzyme, mobile domain GNE09_15150 PF00440 Bacterial regulatory proteins, tetR family GNE09_15165 PF02915 Rubrerythrin GNE09_15170 PF10903 Protein of unknown function (DUF2691) GNE09_15200 PF02770 Acyl-CoA dehydrogenase, middle domain GNE09_15200 PF08028 Acyl-CoA dehydrogenase, C-terminal domain GNE09_15200 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GNE09_15215 PF03932 CutC family GNE09_15220 PF10502 Signal peptidase, peptidase S26 GNE09_15225 PF09339 IclR helix-turn-helix domain GNE09_15225 PF01614 Bacterial transcriptional regulator GNE09_15230 PF02682 Carboxyltransferase domain, subdomain C and D GNE09_15240 PF03746 LamB/YcsF family GNE09_15255 PF01470 Pyroglutamyl peptidase GNE09_15260 PF02146 Sir2 family GNE09_15270 PF10502 Signal peptidase, peptidase S26 GNE09_15275 PF04989 Cephalosporin hydroxylase GNE09_15280 PF00293 NUDIX domain GNE09_15290 PF00672 HAMP domain GNE09_15290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNE09_15290 PF00989 PAS fold GNE09_15290 PF00512 His Kinase A (phospho-acceptor) domain GNE09_15290 PF18698 Histidine kinase sensor domain GNE09_15300 PF02559 CarD-like/TRCF domain GNE09_15315 PF10842 Protein of unknown function (DUF2642) GNE09_15330 PF00067 Cytochrome P450 GNE09_15335 PF00067 Cytochrome P450 GNE09_15350 PF00324 Amino acid permease GNE09_15360 PF01925 Sulfite exporter TauE/SafE GNE09_15390 PF13031 Protein of unknown function (DUF3892) GNE09_15395 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 GNE09_15400 PF00392 Bacterial regulatory proteins, gntR family GNE09_15400 PF00155 Aminotransferase class I and II GNE09_15405 PF00892 EamA-like transporter family GNE09_15410 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain GNE09_15410 PF00293 NUDIX domain GNE09_15410 PF09297 NADH pyrophosphatase zinc ribbon domain GNE09_15420 PF00583 Acetyltransferase (GNAT) family GNE09_15425 PF12833 Helix-turn-helix domain GNE09_15445 PF05406 WGR domain GNE09_15450 PF00293 NUDIX domain GNE09_15460 PF00679 Elongation factor G C-terminus GNE09_15460 PF14492 Elongation Factor G, domain II GNE09_15460 PF00009 Elongation factor Tu GTP binding domain GNE09_15460 PF03764 Elongation factor G, domain IV GNE09_15465 PF01047 MarR family GNE09_15470 PF00881 Nitroreductase family GNE09_15490 PF14436 Bacterial EndoU nuclease GNE09_15490 PF04740 LXG domain of WXG superfamily GNE09_15510 PF04740 LXG domain of WXG superfamily GNE09_15510 PF15652 HNH/Endo VII superfamily toxin with a SHH signature GNE09_15515 PF09346 SMI1 / KNR4 family (SUKH-1) GNE09_15565 PF17863 AAA lid domain GNE09_15565 PF07726 ATPase family associated with various cellular activities (AAA) GNE09_15585 PF00144 Beta-lactamase GNE09_15590 PF01979 Amidohydrolase family GNE09_15590 PF13382 Adenine deaminase C-terminal domain GNE09_15600 PF06628 Catalase-related immune-responsive GNE09_15600 PF00199 Catalase GNE09_15605 PF00202 Aminotransferase class-III GNE09_15625 PF07726 ATPase family associated with various cellular activities (AAA) GNE09_15625 PF17863 AAA lid domain GNE09_15645 PF12681 Glyoxalase-like domain GNE09_15650 PF13302 Acetyltransferase (GNAT) domain GNE09_15670 PF13443 Cro/C1-type HTH DNA-binding domain GNE09_15675 PF11188 Protein of unknown function (DUF2975) GNE09_15685 PF04294 VanW like protein GNE09_15690 PF05547 Immune inhibitor A peptidase M6 GNE09_15695 PF00487 Fatty acid desaturase GNE09_15710 PF00324 Amino acid permease GNE09_15715 PF01614 Bacterial transcriptional regulator GNE09_15715 PF09339 IclR helix-turn-helix domain GNE09_15720 PF01546 Peptidase family M20/M25/M40 GNE09_15725 PF03807 NADP oxidoreductase coenzyme F420-dependent GNE09_15725 PF14748 Pyrroline-5-carboxylate reductase dimerisation GNE09_15730 PF00696 Amino acid kinase family GNE09_15730 PF01472 PUA domain GNE09_15735 PF00171 Aldehyde dehydrogenase family GNE09_15740 PF01773 Na+ dependent nucleoside transporter N-terminus GNE09_15740 PF07662 Na+ dependent nucleoside transporter C-terminus GNE09_15745 PF01022 Bacterial regulatory protein, arsR family GNE09_15755 PF03992 Antibiotic biosynthesis monooxygenase GNE09_15775 PF01791 DeoC/LacD family aldolase GNE09_15785 PF02782 FGGY family of carbohydrate kinases, C-terminal domain GNE09_15785 PF00370 FGGY family of carbohydrate kinases, N-terminal domain GNE09_15790 PF00325 Bacterial regulatory proteins, crp family GNE09_15790 PF04198 Putative sugar-binding domain GNE09_15795 PF00005 ABC transporter GNE09_15800 PF02653 Branched-chain amino acid transport system / permease component GNE09_15805 PF02653 Branched-chain amino acid transport system / permease component GNE09_15810 PF13407 Periplasmic binding protein domain GNE09_15815 PF06039 Malate:quinone oxidoreductase (Mqo) GNE09_15870 PF01636 Phosphotransferase enzyme family GNE09_15895 PF01264 Chorismate synthase GNE09_15900 PF00155 Aminotransferase class I and II GNE09_15905 PF02153 Prephenate dehydrogenase GNE09_15905 PF01842 ACT domain GNE09_15910 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) GNE09_15920 PF00440 Bacterial regulatory proteins, tetR family GNE09_15920 PF16295 Tetracyclin repressor-like, C-terminal domain GNE09_15930 PF00005 ABC transporter GNE09_15930 PF12848 ABC transporter GNE09_15935 PF00884 Sulfatase GNE09_15940 PF03741 Integral membrane protein TerC family GNE09_15960 PF01522 Polysaccharide deacetylase GNE09_15980 PF00291 Pyridoxal-phosphate dependent enzyme GNE09_15985 PF08713 DNA alkylation repair enzyme GNE09_16005 PF12867 DinB superfamily GNE09_16010 PF13536 Putative multidrug resistance efflux transporter GNE09_16020 PF02522 Aminoglycoside 3-N-acetyltransferase GNE09_16045 PF00005 ABC transporter GNE09_16050 PF09084 NMT1/THI5 like GNE09_16055 PF00528 Binding-protein-dependent transport system inner membrane component GNE09_16060 PF00296 Luciferase-like monooxygenase GNE09_16070 PF01594 AI-2E family transporter GNE09_16115 PF00005 ABC transporter GNE09_16135 PF03630 Fumble GNE09_16140 PF07977 FabA-like domain GNE09_16145 PF00155 Aminotransferase class I and II GNE09_16180 PF08241 Methyltransferase domain GNE09_16195 PF04226 Transglycosylase associated protein GNE09_16220 PF07690 Major Facilitator Superfamily GNE09_16225 PF12793 Sugar transport-related sRNA regulator N-term GNE09_16225 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GNE09_16230 PF13171 Protein of unknown function (DUF4004) GNE09_16235 PF04519 Polymer-forming cytoskeletal GNE09_16245 PF07690 Major Facilitator Superfamily GNE09_16280 PF07552 Spore Coat Protein X and V domain GNE09_16285 PF02645 Uncharacterised protein, DegV family COG1307 GNE09_16290 PF08439 Oligopeptidase F GNE09_16290 PF01432 Peptidase family M3 GNE09_16295 PF03808 Glycosyl transferase WecB/TagA/CpsF family GNE09_16300 PF01048 Phosphorylase superfamily GNE09_16315 PF00486 Transcriptional regulatory protein, C terminal GNE09_16315 PF00072 Response regulator receiver domain GNE09_16330 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain GNE09_16330 PF02129 X-Pro dipeptidyl-peptidase (S15 family) GNE09_16380 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain GNE09_16380 PF13378 Enolase C-terminal domain-like GNE09_16385 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain GNE09_16385 PF00877 NlpC/P60 family GNE09_16390 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GNE09_16395 PF04914 DltD protein GNE09_16405 PF09335 SNARE associated Golgi protein GNE09_16410 PF01966 HD domain GNE09_16415 PF02824 TGS domain GNE09_16415 PF04607 Region found in RelA / SpoT proteins GNE09_16415 PF13291 ACT domain GNE09_16420 PF08876 Domain of unknown function (DUF1836) GNE09_16435 PF07992 Pyridine nucleotide-disulphide oxidoreductase GNE09_16435 PF04324 BFD-like [2Fe-2S] binding domain GNE09_16445 PF07992 Pyridine nucleotide-disulphide oxidoreductase GNE09_16445 PF04324 BFD-like [2Fe-2S] binding domain GNE09_16450 PF02954 Bacterial regulatory protein, Fis family GNE09_16450 PF13188 PAS domain GNE09_16450 PF00158 Sigma-54 interaction domain GNE09_16455 PF01266 FAD dependent oxidoreductase GNE09_16460 PF05544 Proline racemase GNE09_16465 PF05544 Proline racemase GNE09_16470 PF00701 Dihydrodipicolinate synthetase family GNE09_16475 PF00171 Aldehyde dehydrogenase family GNE09_16480 PF01235 Sodium:alanine symporter family GNE09_16500 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading GNE09_16500 PF18416 N-acetylglucosamine binding protein domain 2 GNE09_16505 PF02833 DHHA2 domain GNE09_16505 PF01368 DHH family GNE09_16530 PF12123 N-acetylmuramoyl-l-alanine amidase GNE09_16530 PF01510 N-acetylmuramoyl-L-alanine amidase GNE09_16550 PF00270 DEAD/DEAH box helicase GNE09_16550 PF00570 HRDC domain GNE09_16550 PF16124 RecQ zinc-binding GNE09_16550 PF09382 RQC domain GNE09_16550 PF00271 Helicase conserved C-terminal domain GNE09_16565 PF13538 UvrD-like helicase C-terminal domain GNE09_16570 PF00583 Acetyltransferase (GNAT) family GNE09_16620 PF04237 YjbR GNE09_16625 PF08241 Methyltransferase domain GNE09_16630 PF10990 Protein of unknown function (DUF2809) GNE09_16640 PF01202 Shikimate kinase GNE09_16645 PF03781 Sulfatase-modifying factor enzyme 1 GNE09_16655 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading GNE09_16655 PF18416 N-acetylglucosamine binding protein domain 2 GNE09_16670 PF13673 Acetyltransferase (GNAT) domain GNE09_16675 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) GNE09_16695 PF04069 Substrate binding domain of ABC-type glycine betaine transport system GNE09_16700 PF00005 ABC transporter GNE09_16700 PF00571 CBS domain GNE09_16705 PF00528 Binding-protein-dependent transport system inner membrane component GNE09_16735 PF00106 short chain dehydrogenase GNE09_16745 PF00676 Dehydrogenase E1 component GNE09_16755 PF02817 e3 binding domain GNE09_16755 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) GNE09_16755 PF00364 Biotin-requiring enzyme GNE09_16760 PF07992 Pyridine nucleotide-disulphide oxidoreductase GNE09_16760 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GNE09_16775 PF02082 Transcriptional regulator GNE09_16790 PF00455 DeoR C terminal sensor domain GNE09_16790 PF08220 DeoR-like helix-turn-helix domain GNE09_16795 PF13302 Acetyltransferase (GNAT) domain GNE09_16805 PF00158 Sigma-54 interaction domain GNE09_16805 PF02954 Bacterial regulatory protein, Fis family GNE09_16805 PF01590 GAF domain GNE09_16825 PF08359 YsiA-like protein, C-terminal region GNE09_16825 PF00440 Bacterial regulatory proteins, tetR family GNE09_16830 PF00266 Aminotransferase class-V GNE09_16835 PF04199 Putative cyclase GNE09_16840 PF03301 Tryptophan 2,3-dioxygenase GNE09_16860 PF07486 Cell Wall Hydrolase GNE09_16860 PF01471 Putative peptidoglycan binding domain GNE09_16865 PF14620 YpeB sporulation GNE09_16865 PF03413 Peptidase propeptide and YPEB domain GNE09_16870 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) GNE09_16910 PF00561 alpha/beta hydrolase fold GNE09_16915 PF00155 Aminotransferase class I and II GNE09_16915 PF00392 Bacterial regulatory proteins, gntR family GNE09_16920 PF00892 EamA-like transporter family GNE09_16930 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GNE09_16945 PF00149 Calcineurin-like phosphoesterase GNE09_16945 PF02872 5'-nucleotidase, C-terminal domain GNE09_16950 PF01447 Thermolysin metallopeptidase, catalytic domain GNE09_16950 PF02868 Thermolysin metallopeptidase, alpha-helical domain GNE09_16950 PF03413 Peptidase propeptide and YPEB domain GNE09_16950 PF07504 Fungalysin/Thermolysin Propeptide Motif GNE09_16955 PF03714 Bacterial pullanase-associated domain GNE09_16955 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) GNE09_16955 PF00128 Alpha amylase, catalytic domain GNE09_16970 PF00282 Pyridoxal-dependent decarboxylase conserved domain GNE09_16975 PF07859 alpha/beta hydrolase fold GNE09_16985 PF02687 FtsX-like permease family GNE09_16985 PF12704 MacB-like periplasmic core domain GNE09_17005 PF16736 Single Cache-like GNE09_17005 PF00989 PAS fold GNE09_17005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNE09_17005 PF00512 His Kinase A (phospho-acceptor) domain GNE09_17010 PF00072 Response regulator receiver domain GNE09_17010 PF00486 Transcriptional regulatory protein, C terminal GNE09_17040 PF01266 FAD dependent oxidoreductase GNE09_17060 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase GNE09_17065 PF00144 Beta-lactamase GNE09_17095 PF01541 GIY-YIG catalytic domain GNE09_17105 PF02673 Bacitracin resistance protein BacA GNE09_17120 PF12867 DinB superfamily GNE09_17130 PF08000 Bacterial PH domain GNE09_17135 PF01734 Patatin-like phospholipase GNE09_17170 PF12706 Beta-lactamase superfamily domain GNE09_17185 PF02768 DNA polymerase III beta subunit, C-terminal domain GNE09_17185 PF02767 DNA polymerase III beta subunit, central domain GNE09_17185 PF00712 DNA polymerase III beta subunit, N-terminal domain GNE09_17200 PF07690 Major Facilitator Superfamily GNE09_17215 PF00293 NUDIX domain GNE09_17220 PF01784 NIF3 (NGG1p interacting factor 3) GNE09_17230 PF01156 Inosine-uridine preferring nucleoside hydrolase GNE09_17235 PF01270 Glycosyl hydrolases family 8 GNE09_17240 PF00892 EamA-like transporter family GNE09_17245 PF00392 Bacterial regulatory proteins, gntR family GNE09_17245 PF00155 Aminotransferase class I and II GNE09_17265 PF03009 Glycerophosphoryl diester phosphodiesterase family GNE09_17330 PF01569 PAP2 superfamily GNE09_17335 PF00107 Zinc-binding dehydrogenase GNE09_17335 PF08240 Alcohol dehydrogenase GroES-like domain GNE09_17355 PF00293 NUDIX domain GNE09_17355 PF13344 Haloacid dehalogenase-like hydrolase GNE09_17365 PF12833 Helix-turn-helix domain GNE09_17365 PF02805 Metal binding domain of Ada GNE09_17445 PF12558 ATP-binding cassette cobalt transporter GNE09_17445 PF00005 ABC transporter GNE09_17450 PF07155 ECF-type riboflavin transporter, S component GNE09_17460 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase GNE09_17490 PF00067 Cytochrome P450 GNE09_17500 PF07561 Domain of Unknown Function (DUF1540) GNE09_17505 PF00132 Bacterial transferase hexapeptide (six repeats) GNE09_17515 PF00067 Cytochrome P450 GNE09_17560 PF01510 N-acetylmuramoyl-L-alanine amidase GNE09_17560 PF12123 N-acetylmuramoyl-l-alanine amidase GNE09_17565 PF04688 SPP1 phage holin GNE09_17645 PF00574 Clp protease GNE09_17655 PF03354 Phage Terminase GNE09_17685 PF00589 Phage integrase family GNE09_17755 PF01695 IstB-like ATP binding protein GNE09_17755 PF07319 Primosomal protein DnaI N-terminus GNE09_17775 PF01381 Helix-turn-helix GNE09_17785 PF14659 Phage integrase, N-terminal SAM-like domain GNE09_17785 PF00589 Phage integrase family GNE09_17815 PF03070 TENA/THI-4/PQQC family GNE09_17820 PF07478 D-ala D-ala ligase C-terminus GNE09_17820 PF01820 D-ala D-ala ligase N-terminus GNE09_17825 PF00155 Aminotransferase class I and II GNE09_17825 PF00392 Bacterial regulatory proteins, gntR family GNE09_17830 PF00742 Homoserine dehydrogenase GNE09_17830 PF03447 Homoserine dehydrogenase, NAD binding domain GNE09_17855 PF00005 ABC transporter GNE09_17875 PF00248 Aldo/keto reductase family GNE09_17880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GNE09_17880 PF03466 LysR substrate binding domain GNE09_17885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNE09_17890 PF00072 Response regulator receiver domain GNE09_17890 PF00486 Transcriptional regulatory protein, C terminal GNE09_17900 PF07486 Cell Wall Hydrolase GNE09_17905 PF01921 tRNA synthetases class I (K) GNE09_17910 PF01921 tRNA synthetases class I (K) GNE09_17920 PF08450 SMP-30/Gluconolactonase/LRE-like region GNE09_17930 PF01965 DJ-1/PfpI family GNE09_17935 PF08241 Methyltransferase domain GNE09_17945 PF08240 Alcohol dehydrogenase GroES-like domain GNE09_17945 PF00107 Zinc-binding dehydrogenase GNE09_17965 PF00155 Aminotransferase class I and II GNE09_17965 PF00392 Bacterial regulatory proteins, gntR family GNE09_17980 PF12833 Helix-turn-helix domain GNE09_18010 PF01638 HxlR-like helix-turn-helix GNE09_18020 PF00376 MerR family regulatory protein GNE09_18020 PF09278 MerR, DNA binding GNE09_18025 PF17760 UvrA interaction domain GNE09_18025 PF00005 ABC transporter GNE09_18025 PF17755 UvrA DNA-binding domain GNE09_18060 PF07504 Fungalysin/Thermolysin Propeptide Motif GNE09_18060 PF02868 Thermolysin metallopeptidase, alpha-helical domain GNE09_18060 PF01447 Thermolysin metallopeptidase, catalytic domain GNE09_18060 PF03413 Peptidase propeptide and YPEB domain GNE09_18075 PF01048 Phosphorylase superfamily GNE09_18090 PF01966 HD domain GNE09_18095 PF00072 Response regulator receiver domain GNE09_18095 PF00486 Transcriptional regulatory protein, C terminal GNE09_18100 PF00512 His Kinase A (phospho-acceptor) domain GNE09_18100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNE09_18145 PF01039 Carboxyl transferase domain GNE09_18150 PF00378 Enoyl-CoA hydratase/isomerase GNE09_18160 PF00364 Biotin-requiring enzyme GNE09_18165 PF02785 Biotin carboxylase C-terminal domain GNE09_18165 PF00289 Biotin carboxylase, N-terminal domain GNE09_18165 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GNE09_18170 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GNE09_18170 PF02770 Acyl-CoA dehydrogenase, middle domain GNE09_18170 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GNE09_18185 PF00440 Bacterial regulatory proteins, tetR family GNE09_18185 PF08359 YsiA-like protein, C-terminal region GNE09_18205 PF00149 Calcineurin-like phosphoesterase GNE09_18230 PF04542 Sigma-70 region 2 GNE09_18230 PF08281 Sigma-70, region 4 GNE09_18265 PF01522 Polysaccharide deacetylase GNE09_18280 PF01381 Helix-turn-helix GNE09_18285 PF00395 S-layer homology domain GNE09_18285 PF01520 N-acetylmuramoyl-L-alanine amidase GNE09_18305 PF01022 Bacterial regulatory protein, arsR family GNE09_18325 PF04389 Peptidase family M28 GNE09_18325 PF02225 PA domain GNE09_18335 PF02585 GlcNAc-PI de-N-acetylase GNE09_18340 PF08889 WbqC-like protein family GNE09_18355 PF01370 NAD dependent epimerase/dehydratase family GNE09_18360 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family GNE09_18365 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain GNE09_18365 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain GNE09_18365 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain GNE09_18370 PF00583 Acetyltransferase (GNAT) family GNE09_18380 PF13302 Acetyltransferase (GNAT) domain GNE09_18440 PF01648 4'-phosphopantetheinyl transferase superfamily GNE09_18460 PF07690 Major Facilitator Superfamily GNE09_18480 PF00132 Bacterial transferase hexapeptide (six repeats) GNE09_18485 PF01925 Sulfite exporter TauE/SafE GNE09_18495 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin GNE09_18495 PF18277 AbrB C-terminal domain GNE09_18505 PF00196 Bacterial regulatory proteins, luxR family GNE09_18505 PF00072 Response regulator receiver domain GNE09_18520 PF07687 Peptidase dimerisation domain GNE09_18520 PF01546 Peptidase family M20/M25/M40 GNE09_18540 PF14171 Toxin SpoIISA, type II toxin-antitoxin system GNE09_18545 PF00300 Histidine phosphatase superfamily (branch 1) GNE09_18555 PF00205 Thiamine pyrophosphate enzyme, central domain GNE09_18555 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GNE09_18555 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GNE09_18560 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GNE09_18560 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GNE09_18560 PF00205 Thiamine pyrophosphate enzyme, central domain GNE09_18565 PF08241 Methyltransferase domain GNE09_18575 PF09313 Domain of unknown function (DUF1971) GNE09_18575 PF03848 Tellurite resistance protein TehB GNE09_18580 PF00270 DEAD/DEAH box helicase GNE09_18580 PF00271 Helicase conserved C-terminal domain GNE09_18590 PF00753 Metallo-beta-lactamase superfamily GNE09_18590 PF16123 Hydroxyacylglutathione hydrolase C-terminus GNE09_18600 PF07690 Major Facilitator Superfamily GNE09_18610 PF00291 Pyridoxal-phosphate dependent enzyme GNE09_18615 PF00266 Aminotransferase class-V GNE09_18620 PF02660 Glycerol-3-phosphate acyltransferase GNE09_18625 PF01869 BadF/BadG/BcrA/BcrD ATPase family GNE09_18630 PF03702 Anhydro-N-acetylmuramic acid kinase GNE09_18640 PF02378 Phosphotransferase system, EIIC GNE09_18650 PF02638 Glycosyl hydrolase-like 10 GNE09_18670 PF12680 SnoaL-like domain GNE09_18670 PF04542 Sigma-70 region 2 GNE09_18670 PF08281 Sigma-70, region 4 GNE09_18675 PF07992 Pyridine nucleotide-disulphide oxidoreductase GNE09_18675 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GNE09_18705 PF01381 Helix-turn-helix GNE09_18705 PF07883 Cupin domain GNE09_18710 PF01810 LysE type translocator GNE09_18730 PF00005 ABC transporter GNE09_18730 PF00664 ABC transporter transmembrane region GNE09_18735 PF00005 ABC transporter GNE09_18735 PF00664 ABC transporter transmembrane region GNE09_18750 PF03473 MOSC domain GNE09_18750 PF03475 3-alpha domain GNE09_18755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GNE09_18755 PF03466 LysR substrate binding domain GNE09_18775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GNE09_18775 PF03466 LysR substrate binding domain GNE09_18795 PF00313 'Cold-shock' DNA-binding domain GNE09_18805 PF13302 Acetyltransferase (GNAT) domain GNE09_18840 PF00583 Acetyltransferase (GNAT) family GNE09_18855 PF00302 Chloramphenicol acetyltransferase GNE09_18865 PF03176 MMPL family GNE09_18875 PF16123 Hydroxyacylglutathione hydrolase C-terminus GNE09_18875 PF00753 Metallo-beta-lactamase superfamily GNE09_18935 PF00005 ABC transporter GNE09_18940 PF03129 Anticodon binding domain GNE09_18940 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GNE09_18940 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain GNE09_18940 PF02824 TGS domain GNE09_18945 PF00849 RNA pseudouridylate synthase GNE09_18945 PF01479 S4 domain GNE09_18965 PF01235 Sodium:alanine symporter family GNE09_18970 PF00082 Subtilase family GNE09_18975 PF05163 DinB family GNE09_18985 PF00216 Bacterial DNA-binding protein GNE09_19000 PF07690 Major Facilitator Superfamily GNE09_19005 PF03621 MbtH-like protein GNE09_19010 PF00668 Condensation domain GNE09_19010 PF13193 AMP-binding enzyme C-terminal domain GNE09_19010 PF00550 Phosphopantetheine attachment site GNE09_19010 PF00975 Thioesterase domain GNE09_19010 PF00501 AMP-binding enzyme GNE09_19015 PF00550 Phosphopantetheine attachment site GNE09_19015 PF00857 Isochorismatase family GNE09_19020 PF00501 AMP-binding enzyme GNE09_19020 PF13193 AMP-binding enzyme C-terminal domain GNE09_19025 PF00425 chorismate binding enzyme GNE09_19030 PF00106 short chain dehydrogenase GNE09_19035 PF07690 Major Facilitator Superfamily GNE09_19045 PF01022 Bacterial regulatory protein, arsR family GNE09_19050 PF13476 AAA domain GNE09_19055 PF12320 Type 5 capsule protein repressor C-terminal domain GNE09_19055 PF00149 Calcineurin-like phosphoesterase GNE09_19075 PF01810 LysE type translocator GNE09_19080 PF00171 Aldehyde dehydrogenase family GNE09_19085 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase GNE09_19085 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase GNE09_19090 PF02770 Acyl-CoA dehydrogenase, middle domain GNE09_19090 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GNE09_19090 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GNE09_19100 PF03972 MmgE/PrpD family GNE09_19105 PF00285 Citrate synthase, C-terminal domain GNE09_19110 PF01521 Iron-sulphur cluster biosynthesis GNE09_19115 PF07690 Major Facilitator Superfamily GNE09_19145 PF00106 short chain dehydrogenase GNE09_19160 PF10676 Spore germination protein gerPA/gerPF GNE09_19235 PF13302 Acetyltransferase (GNAT) domain GNE09_19240 PF00085 Thioredoxin GNE09_19245 PF01545 Cation efflux family GNE09_19245 PF16916 Dimerisation domain of Zinc Transporter GNE09_19250 PF01569 PAP2 superfamily GNE09_19270 PF14162 YozD-like protein GNE09_19285 PF06855 YozE SAM-like fold GNE09_19290 PF14122 YokU-like protein, putative antitoxin GNE09_19295 PF12544 Lysine-2,3-aminomutase GNE09_19305 PF00583 Acetyltransferase (GNAT) family GNE09_19310 PF01546 Peptidase family M20/M25/M40 GNE09_19310 PF07687 Peptidase dimerisation domain GNE09_19315 PF01144 Coenzyme A transferase GNE09_19320 PF01144 Coenzyme A transferase GNE09_19325 PF00202 Aminotransferase class-III GNE09_19335 PF09385 Histidine kinase N terminal GNE09_19340 PF07997 Protein of unknown function (DUF1694) GNE09_19345 PF00171 Aldehyde dehydrogenase family GNE09_19350 PF03471 Transporter associated domain GNE09_19350 PF01595 Cyclin M transmembrane N-terminal domain GNE09_19350 PF00571 CBS domain GNE09_19380 PF13520 Amino acid permease GNE09_19390 PF00571 CBS domain GNE09_19390 PF00005 ABC transporter GNE09_19405 PF03358 NADPH-dependent FMN reductase GNE09_19425 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase GNE09_19425 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain GNE09_19430 PF02447 GntP family permease GNE09_19435 PF02782 FGGY family of carbohydrate kinases, C-terminal domain GNE09_19435 PF00370 FGGY family of carbohydrate kinases, N-terminal domain GNE09_19450 PF00107 Zinc-binding dehydrogenase GNE09_19450 PF08240 Alcohol dehydrogenase GroES-like domain GNE09_19455 PF02567 Phenazine biosynthesis-like protein GNE09_19460 PF01380 SIS domain GNE09_19460 PF01418 Helix-turn-helix domain, rpiR family GNE09_19465 PF00196 Bacterial regulatory proteins, luxR family GNE09_19465 PF00072 Response regulator receiver domain GNE09_19475 PF00924 Mechanosensitive ion channel GNE09_19480 PF00293 NUDIX domain GNE09_19485 PF00857 Isochorismatase family GNE09_19495 PF00881 Nitroreductase family GNE09_19500 PF01063 Amino-transferase class IV GNE09_19505 PF01497 Periplasmic binding protein GNE09_19510 PF01520 N-acetylmuramoyl-L-alanine amidase GNE09_19510 PF05036 Sporulation related domain GNE09_19525 PF13537 Glutamine amidotransferase domain GNE09_19525 PF00733 Asparagine synthase GNE09_19530 PF00011 Hsp20/alpha crystallin family GNE09_19535 PF02630 SCO1/SenC GNE09_19545 PF02645 Uncharacterised protein, DegV family COG1307 GNE09_19560 PF02416 mttA/Hcf106 family GNE09_19565 PF03006 Haemolysin-III related GNE09_19570 PF01553 Acyltransferase GNE09_19575 PF02525 Flavodoxin-like fold GNE09_19580 PF05223 NTF2-like N-terminal transpeptidase domain GNE09_19580 PF03717 Penicillin-binding Protein dimerisation domain GNE09_19580 PF00905 Penicillin binding protein transpeptidase domain GNE09_19585 PF00186 Dihydrofolate reductase GNE09_19590 PF00303 Thymidylate synthase GNE09_19595 PF00144 Beta-lactamase GNE09_19610 PF13419 Haloacid dehalogenase-like hydrolase GNE09_19615 PF14005 YpjP-like protein GNE09_19625 PF00005 ABC transporter GNE09_19635 PF08645 Polynucleotide kinase 3 phosphatase GNE09_19645 PF11188 Protein of unknown function (DUF2975) GNE09_19650 PF00583 Acetyltransferase (GNAT) family GNE09_19655 PF01980 tRNA-methyltransferase O GNE09_19660 PF01177 Asp/Glu/Hydantoin racemase GNE09_19665 PF00465 Iron-containing alcohol dehydrogenase GNE09_19695 PF00209 Sodium:neurotransmitter symporter family GNE09_19700 PF01336 OB-fold nucleic acid binding domain GNE09_19700 PF00152 tRNA synthetases class II (D, K and N) GNE09_19715 PF08264 Anticodon-binding domain of tRNA GNE09_19715 PF00133 tRNA synthetases class I (I, L, M and V) GNE09_19740 PF00750 tRNA synthetases class I (R) GNE09_19740 PF03485 Arginyl tRNA synthetase N terminal domain GNE09_19740 PF05746 DALR anticodon binding domain GNE09_19745 PF04445 Putative SAM-dependent methyltransferase GNE09_19750 PF06491 Disulphide isomerase GNE09_19760 PF13769 Virulence factor GNE09_19760 PF08712 Scaffold protein Nfu/NifU N terminal GNE09_19770 PF00436 Single-strand binding protein family GNE09_19785 PF16326 ABC transporter C-terminal domain GNE09_19785 PF12848 ABC transporter GNE09_19785 PF00005 ABC transporter GNE09_19790 PF01966 HD domain GNE09_19805 PF18801 response regulator aspartate phosphatase H, N terminal GNE09_19805 PF17874 MalT-like TPR region GNE09_19820 PF04232 Stage V sporulation protein S (SpoVS) GNE09_19855 PF04405 Domain of Unknown function (DUF542) GNE09_19855 PF01814 Hemerythrin HHE cation binding domain GNE09_19860 PF01077 Nitrite and sulphite reductase 4Fe-4S domain GNE09_19860 PF07992 Pyridine nucleotide-disulphide oxidoreductase GNE09_19860 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain GNE09_19860 PF04324 BFD-like [2Fe-2S] binding domain GNE09_19860 PF18267 Rubredoxin NAD+ reductase C-terminal domain GNE09_19865 PF00355 Rieske [2Fe-2S] domain GNE09_19870 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GNE09_19875 PF01903 CbiX GNE09_19890 PF01609 Transposase DDE domain GNE09_19900 PF07690 Major Facilitator Superfamily GNE09_19910 PF02391 MoaE protein GNE09_19915 PF03453 MoeA N-terminal region (domain I and II) GNE09_19915 PF03454 MoeA C-terminal region (domain IV) GNE09_19915 PF00994 Probable molybdopterin binding domain GNE09_19920 PF00899 ThiF family GNE09_19925 PF04055 Radical SAM superfamily GNE09_19925 PF06463 Molybdenum Cofactor Synthesis C GNE09_19930 PF00325 Bacterial regulatory proteins, crp family GNE09_19930 PF00027 Cyclic nucleotide-binding domain GNE09_19935 PF02665 Nitrate reductase gamma subunit GNE09_19940 PF02613 Nitrate reductase delta subunit GNE09_19945 PF13247 4Fe-4S dicluster domain GNE09_19945 PF14711 Respiratory nitrate reductase beta C-terminal GNE09_19950 PF01568 Molydopterin dinucleotide binding domain GNE09_19950 PF14710 Respiratory nitrate reductase alpha N-terminal GNE09_19950 PF00384 Molybdopterin oxidoreductase GNE09_19955 PF17863 AAA lid domain GNE09_19955 PF07726 ATPase family associated with various cellular activities (AAA) GNE09_19960 PF01882 Protein of unknown function DUF58 GNE09_19965 PF01841 Transglutaminase-like superfamily GNE09_19965 PF13559 Domain of unknown function (DUF4129) GNE09_19965 PF11992 Domain of unknown function (DUF3488) GNE09_19970 PF00255 Glutathione peroxidase GNE09_19980 PF00258 Flavodoxin GNE09_19980 PF01613 Flavin reductase like domain GNE09_19990 PF03109 ABC1 family GNE09_20000 PF04542 Sigma-70 region 2 GNE09_20000 PF08281 Sigma-70, region 4 GNE09_20005 PF08240 Alcohol dehydrogenase GroES-like domain GNE09_20005 PF00107 Zinc-binding dehydrogenase GNE09_20015 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GNE09_20020 PF01261 Xylose isomerase-like TIM barrel GNE09_20030 PF00270 DEAD/DEAH box helicase GNE09_20030 PF00271 Helicase conserved C-terminal domain GNE09_20040 PF01268 Formate--tetrahydrofolate ligase GNE09_20045 PF01209 ubiE/COQ5 methyltransferase family GNE09_20070 PF09579 Sporulation protein YtfJ (Spore_YtfJ) GNE09_20080 PF02899 Phage integrase, N-terminal SAM-like domain GNE09_20080 PF00589 Phage integrase family GNE09_20165 PF06470 SMC proteins Flexible Hinge Domain GNE09_20165 PF02463 RecF/RecN/SMC N terminal domain GNE09_20235 PF12538 DNA transporter GNE09_20235 PF01580 FtsK/SpoIIIE family GNE09_20240 PF10140 WXG100 protein secretion system (Wss), protein YukC GNE09_20245 PF08817 WXG100 protein secretion system (Wss), protein YukD GNE09_20260 PF06013 Proteins of 100 residues with WXG GNE09_20275 PF00583 Acetyltransferase (GNAT) family GNE09_20310 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) GNE09_20310 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 GNE09_20315 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase GNE09_20335 PF01168 Alanine racemase, N-terminal domain GNE09_20335 PF00842 Alanine racemase, C-terminal domain GNE09_20350 PF01047 MarR family GNE09_20365 PF07454 Stage II sporulation protein P (SpoIIP) GNE09_20370 PF01145 SPFH domain / Band 7 family GNE09_20380 PF07690 Major Facilitator Superfamily GNE09_20395 PF02557 D-alanyl-D-alanine carboxypeptidase GNE09_20405 PF07454 Stage II sporulation protein P (SpoIIP) GNE09_20425 PF01588 Putative tRNA binding domain GNE09_20430 PF05525 Branched-chain amino acid transport protein GNE09_20455 PF00571 CBS domain GNE09_20455 PF03471 Transporter associated domain GNE09_20455 PF01595 Cyclin M transmembrane N-terminal domain GNE09_20460 PF04306 Protein of unknown function (DUF456) GNE09_20465 PF13460 NAD(P)H-binding GNE09_20490 PF03061 Thioesterase superfamily GNE09_20495 PF09323 Domain of unknown function (DUF1980) GNE09_20510 PF01943 Polysaccharide biosynthesis protein GNE09_20510 PF14667 Polysaccharide biosynthesis C-terminal domain GNE09_20515 PF09335 SNARE associated Golgi protein GNE09_20520 PF00293 NUDIX domain GNE09_20525 PF08757 CotH kinase protein GNE09_20535 PF00300 Histidine phosphatase superfamily (branch 1) GNE09_20545 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GNE09_20550 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GNE09_20560 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain GNE09_20560 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain GNE09_20565 PF00724 NADH:flavin oxidoreductase / NADH oxidase family GNE09_20570 PF13460 NAD(P)H-binding GNE09_20575 PF01297 Zinc-uptake complex component A periplasmic GNE09_20580 PF00583 Acetyltransferase (GNAT) family GNE09_20585 PF07683 Cobalamin synthesis protein cobW C-terminal domain GNE09_20585 PF02492 CobW/HypB/UreG, nucleotide-binding domain GNE09_20590 PF00248 Aldo/keto reductase family GNE09_20595 PF13302 Acetyltransferase (GNAT) domain GNE09_20600 PF01593 Flavin containing amine oxidoreductase GNE09_20610 PF00296 Luciferase-like monooxygenase GNE09_20625 PF00210 Ferritin-like domain GNE09_20645 PF00672 HAMP domain GNE09_20645 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GNE09_20645 PF02743 Cache domain GNE09_20650 PF03193 RsgA GTPase GNE09_20675 PF00248 Aldo/keto reductase family GNE09_20680 PF01022 Bacterial regulatory protein, arsR family GNE09_20685 PF00082 Subtilase family GNE09_20690 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin GNE09_20690 PF18277 AbrB C-terminal domain GNE09_20695 PF02687 FtsX-like permease family GNE09_20700 PF02540 NAD synthase GNE09_20705 PF00293 NUDIX domain GNE09_20705 PF13344 Haloacid dehalogenase-like hydrolase GNE09_20730 PF01734 Patatin-like phospholipase GNE09_20740 PF00392 Bacterial regulatory proteins, gntR family GNE09_20740 PF00155 Aminotransferase class I and II GNE09_20745 PF01810 LysE type translocator GNE09_20755 PF00269 Small, acid-soluble spore proteins, alpha/beta type GNE09_20760 PF01261 Xylose isomerase-like TIM barrel GNE09_20775 PF00501 AMP-binding enzyme GNE09_20775 PF13193 AMP-binding enzyme C-terminal domain GNE09_20780 PF06276 Ferric iron reductase FhuF-like transporter GNE09_20780 PF04183 IucA / IucC family GNE09_20785 PF06276 Ferric iron reductase FhuF-like transporter GNE09_20785 PF04183 IucA / IucC family GNE09_20795 PF02308 MgtC family GNE09_20810 PF03816 Cell envelope-related transcriptional attenuator domain GNE09_20825 PF00288 GHMP kinases N terminal domain GNE09_20825 PF08544 GHMP kinases C terminal GNE09_20830 PF00291 Pyridoxal-phosphate dependent enzyme GNE09_20835 PF01842 ACT domain GNE09_20835 PF03447 Homoserine dehydrogenase, NAD binding domain GNE09_20835 PF00742 Homoserine dehydrogenase GNE09_20855 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain GNE09_20855 PF01522 Polysaccharide deacetylase GNE09_20860 PF04439 Streptomycin adenylyltransferase GNE09_20875 PF00106 short chain dehydrogenase GNE09_20880 PF00512 His Kinase A (phospho-acceptor) domain GNE09_20880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNE09_20880 PF00989 PAS fold GNE09_20880 PF16736 Single Cache-like GNE09_20885 PF00486 Transcriptional regulatory protein, C terminal GNE09_20885 PF00072 Response regulator receiver domain GNE09_20890 PF00664 ABC transporter transmembrane region GNE09_20890 PF00005 ABC transporter GNE09_20900 PF01476 LysM domain GNE09_20900 PF00877 NlpC/P60 family GNE09_20915 PF00768 D-alanyl-D-alanine carboxypeptidase GNE09_20915 PF07943 Penicillin-binding protein 5, C-terminal domain GNE09_20945 PF00132 Bacterial transferase hexapeptide (six repeats) GNE09_20950 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family GNE09_20955 PF00535 Glycosyl transferase family 2 GNE09_20965 PF00005 ABC transporter GNE09_20965 PF00664 ABC transporter transmembrane region GNE09_20970 PF00664 ABC transporter transmembrane region GNE09_20970 PF00005 ABC transporter GNE09_20975 PF02322 Cytochrome bd terminal oxidase subunit II GNE09_20980 PF01654 Cytochrome bd terminal oxidase subunit I GNE09_20990 PF01047 MarR family GNE09_21015 PF00535 Glycosyl transferase family 2 GNE09_21015 PF02709 N-terminal domain of galactosyltransferase GNE09_21030 PF00005 ABC transporter GNE09_21035 PF00550 Phosphopantetheine attachment site GNE09_21040 PF00501 AMP-binding enzyme GNE09_21040 PF13193 AMP-binding enzyme C-terminal domain GNE09_21045 PF13419 Haloacid dehalogenase-like hydrolase GNE09_21050 PF02277 Phosphoribosyltransferase GNE09_21055 PF13477 Glycosyl transferase 4-like GNE09_21055 PF00534 Glycosyl transferases group 1 GNE09_21060 PF16363 GDP-mannose 4,6 dehydratase GNE09_21065 PF00483 Nucleotidyl transferase GNE09_21080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GNE09_21080 PF03466 LysR substrate binding domain GNE09_21090 PF02653 Branched-chain amino acid transport system / permease component GNE09_21095 PF00005 ABC transporter GNE09_21100 PF12399 Branched-chain amino acid ATP-binding cassette transporter GNE09_21100 PF00005 ABC transporter GNE09_21110 PF07683 Cobalamin synthesis protein cobW C-terminal domain GNE09_21110 PF02492 CobW/HypB/UreG, nucleotide-binding domain GNE09_21115 PF01593 Flavin containing amine oxidoreductase GNE09_21120 PF00056 lactate/malate dehydrogenase, NAD binding domain GNE09_21120 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain GNE09_21125 PF01594 AI-2E family transporter GNE09_21130 PF01425 Amidase GNE09_21135 PF00881 Nitroreductase family GNE09_21140 PF01323 DSBA-like thioredoxin domain GNE09_21145 PF02082 Transcriptional regulator GNE09_21150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GNE09_21150 PF03466 LysR substrate binding domain GNE09_21155 PF00892 EamA-like transporter family GNE09_21160 PF07987 Domain of unkown function (DUF1775) GNE09_21165 PF05425 Copper resistance protein D GNE09_21165 PF04234 CopC domain GNE09_21165 PF13115 YtkA-like GNE09_21170 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GNE09_21175 PF05525 Branched-chain amino acid transport protein GNE09_21205 PF07731 Multicopper oxidase GNE09_21205 PF07732 Multicopper oxidase GNE09_21205 PF00394 Multicopper oxidase GNE09_21215 PF00557 Metallopeptidase family M24 GNE09_21215 PF05195 Aminopeptidase P, N-terminal domain GNE09_21220 PF05979 Bacterial protein of unknown function (DUF896) GNE09_21225 PF07301 Protein of unknown function (DUF1453) GNE09_21245 PF04740 LXG domain of WXG superfamily GNE09_21245 PF14436 Bacterial EndoU nuclease GNE09_21260 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region GNE09_21265 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain GNE09_21265 PF00591 Glycosyl transferase family, a/b domain GNE09_21265 PF02885 Glycosyl transferase family, helical bundle domain GNE09_21270 PF01773 Na+ dependent nucleoside transporter N-terminus GNE09_21270 PF07662 Na+ dependent nucleoside transporter C-terminus GNE09_21275 PF01791 DeoC/LacD family aldolase GNE09_21280 PF04198 Putative sugar-binding domain GNE09_21285 PF00440 Bacterial regulatory proteins, tetR family GNE09_21300 PF00583 Acetyltransferase (GNAT) family GNE09_21320 PF05791 Bacillus haemolytic enterotoxin (HBL) GNE09_21325 PF05791 Bacillus haemolytic enterotoxin (HBL) GNE09_21335 PF13520 Amino acid permease GNE09_21355 PF01566 Natural resistance-associated macrophage protein GNE09_21365 PF00512 His Kinase A (phospho-acceptor) domain GNE09_21365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNE09_21370 PF00072 Response regulator receiver domain GNE09_21370 PF00486 Transcriptional regulatory protein, C terminal GNE09_21375 PF13302 Acetyltransferase (GNAT) domain GNE09_21385 PF01979 Amidohydrolase family GNE09_21400 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain GNE09_21400 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain GNE09_21405 PF00072 Response regulator receiver domain GNE09_21405 PF04397 LytTr DNA-binding domain GNE09_21420 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase GNE09_21440 PF09587 Bacterial capsule synthesis protein PGA_cap GNE09_21450 PF00585 C-terminal regulatory domain of Threonine dehydratase GNE09_21450 PF00291 Pyridoxal-phosphate dependent enzyme GNE09_21455 PF00920 Dehydratase family GNE09_21460 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain GNE09_21460 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain GNE09_21475 PF01063 Amino-transferase class IV GNE09_21485 PF01625 Peptide methionine sulfoxide reductase GNE09_21505 PF04239 Protein of unknown function (DUF421) GNE09_21515 PF01522 Polysaccharide deacetylase GNE09_21515 PF00457 Glycosyl hydrolases family 11 GNE09_21515 PF03422 Carbohydrate binding module (family 6) GNE09_21520 PF00209 Sodium:neurotransmitter symporter family GNE09_21540 PF00291 Pyridoxal-phosphate dependent enzyme GNE09_21550 PF01926 50S ribosome-binding GTPase GNE09_21550 PF13167 GTP-binding GTPase N-terminal GNE09_21550 PF16360 GTP-binding GTPase Middle Region GNE09_21555 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GNE09_21555 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal GNE09_21560 PF07690 Major Facilitator Superfamily GNE09_21565 PF07690 Major Facilitator Superfamily GNE09_21570 PF03551 Transcriptional regulator PadR-like family GNE09_21570 PF10400 Virulence activator alpha C-term GNE09_21575 PF03976 Polyphosphate kinase 2 (PPK2) GNE09_21590 PF14158 YndJ-like protein GNE09_21595 PF13761 Domain of unknown function (DUF4166) GNE09_21605 PF00696 Amino acid kinase family GNE09_21605 PF13840 ACT domain GNE09_21615 PF03590 Aspartate-ammonia ligase GNE09_21625 PF00176 SNF2 family N-terminal domain GNE09_21625 PF00271 Helicase conserved C-terminal domain GNE09_21625 PF04434 SWIM zinc finger GNE09_21630 PF00072 Response regulator receiver domain GNE09_21630 PF08664 YcbB domain GNE09_21635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNE09_21640 PF03949 Malic enzyme, NAD binding domain GNE09_21640 PF00390 Malic enzyme, N-terminal domain GNE09_21645 PF00206 Lyase GNE09_21645 PF10415 Fumarase C C-terminus GNE09_21650 PF00375 Sodium:dicarboxylate symporter family GNE09_21655 PF00696 Amino acid kinase family GNE09_21660 PF13091 PLD-like domain GNE09_21675 PF00005 ABC transporter GNE09_21680 PF13492 GAF domain GNE09_21680 PF13185 GAF domain GNE09_21680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNE09_21680 PF07730 Histidine kinase GNE09_21685 PF00196 Bacterial regulatory proteins, luxR family GNE09_21685 PF00072 Response regulator receiver domain GNE09_21710 PF04286 Protein of unknown function (DUF445) GNE09_21715 PF00291 Pyridoxal-phosphate dependent enzyme GNE09_21730 PF18801 response regulator aspartate phosphatase H, N terminal GNE09_21740 PF00578 AhpC/TSA family GNE09_21745 PF02683 Cytochrome C biogenesis protein transmembrane region GNE09_21765 PF03575 Peptidase family S51 GNE09_21770 PF01554 MatE GNE09_21790 PF10415 Fumarase C C-terminus GNE09_21790 PF00206 Lyase GNE09_21800 PF13411 MerR HTH family regulatory protein GNE09_21805 PF03553 Na+/H+ antiporter family GNE09_21820 PF03773 Predicted permease GNE09_21845 PF01545 Cation efflux family GNE09_21845 PF16916 Dimerisation domain of Zinc Transporter GNE09_21865 PF13537 Glutamine amidotransferase domain GNE09_21865 PF00733 Asparagine synthase GNE09_21875 PF01047 MarR family GNE09_21885 PF00561 alpha/beta hydrolase fold GNE09_21895 PF00300 Histidine phosphatase superfamily (branch 1) GNE09_21900 PF13021 Domain of unknown function (DUF3885) GNE09_21920 PF10787 Uncharacterised protein from bacillus cereus group GNE09_21935 PF00528 Binding-protein-dependent transport system inner membrane component GNE09_21945 PF00005 ABC transporter GNE09_21945 PF08402 TOBE domain GNE09_21970 PF08141 Small acid-soluble spore protein H family GNE09_21975 PF00535 Glycosyl transferase family 2 GNE09_21975 PF07238 PilZ domain GNE09_21980 PF03992 Antibiotic biosynthesis monooxygenase GNE09_22010 PF02272 DHHA1 domain GNE09_22010 PF01411 tRNA synthetases class II (A) GNE09_22010 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain GNE09_22020 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GNE09_22020 PF00460 Flagella basal body rod protein GNE09_22025 PF00448 SRP54-type protein, GTPase domain GNE09_22030 PF00771 FHIPEP family GNE09_22035 PF01312 FlhB HrpN YscU SpaS Family GNE09_22045 PF01313 Bacterial export proteins, family 3 GNE09_22060 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term GNE09_22060 PF04509 CheC-like family GNE09_22065 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term GNE09_22065 PF02154 Flagellar motor switch protein FliM GNE09_22075 PF01464 Transglycosylase SLT domain GNE09_22080 PF00700 Bacterial flagellin C-terminal helical region GNE09_22080 PF00669 Bacterial flagellin N-terminal helical region GNE09_22085 PF00669 Bacterial flagellin N-terminal helical region GNE09_22085 PF00700 Bacterial flagellin C-terminal helical region GNE09_22090 PF12181 DNA binding domain of the motility gene repressor (MogR) GNE09_22095 PF00072 Response regulator receiver domain GNE09_22095 PF01584 CheW-like domain GNE09_22110 PF07559 Flagellar basal body protein FlaE GNE09_22110 PF00460 Flagella basal body rod protein GNE09_22110 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GNE09_22130 PF02874 ATP synthase alpha/beta family, beta-barrel domain GNE09_22130 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GNE09_22130 PF18269 T3SS EscN ATPase C-terminal domain GNE09_22140 PF01706 FliG C-terminal domain GNE09_22140 PF14841 FliG middle domain GNE09_22140 PF14842 FliG N-terminal domain GNE09_22145 PF08345 Flagellar M-ring protein C-terminal GNE09_22145 PF01514 Secretory protein of YscJ/FliF family GNE09_22150 PF02049 Flagellar hook-basal body complex protein FliE GNE09_22155 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GNE09_22155 PF00460 Flagella basal body rod protein GNE09_22160 PF00460 Flagella basal body rod protein GNE09_22180 PF00669 Bacterial flagellin N-terminal helical region GNE09_22180 PF00700 Bacterial flagellin C-terminal helical region GNE09_22185 PF00460 Flagella basal body rod protein GNE09_22185 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GNE09_22205 PF03705 CheR methyltransferase, all-alpha domain GNE09_22205 PF01739 CheR methyltransferase, SAM binding domain GNE09_22220 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term GNE09_22220 PF04509 CheC-like family GNE09_22225 PF01584 CheW-like domain GNE09_22225 PF02895 Signal transducing histidine kinase, homodimeric domain GNE09_22225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNE09_22225 PF01627 Hpt domain GNE09_22225 PF07194 P2 response regulator binding domain GNE09_22230 PF00072 Response regulator receiver domain GNE09_22235 PF13677 Membrane MotB of proton-channel complex MotA/MotB GNE09_22235 PF00691 OmpA family GNE09_22240 PF01618 MotA/TolQ/ExbB proton channel family GNE09_22250 PF17209 Hfq protein GNE09_22275 PF00881 Nitroreductase family GNE09_22285 PF02698 DUF218 domain GNE09_22290 PF04239 Protein of unknown function (DUF421) GNE09_22300 PF06445 GyrI-like small molecule binding domain GNE09_22300 PF13411 MerR HTH family regulatory protein GNE09_22305 PF00753 Metallo-beta-lactamase superfamily GNE09_22305 PF17770 Ribonuclease J C-terminal domain GNE09_22305 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain GNE09_22310 PF00999 Sodium/hydrogen exchanger family GNE09_22320 PF00202 Aminotransferase class-III GNE09_22325 PF00474 Sodium:solute symporter family GNE09_22345 PF01810 LysE type translocator GNE09_22350 PF08892 YqcI/YcgG family GNE09_22355 PF00313 'Cold-shock' DNA-binding domain GNE09_22380 PF01263 Aldose 1-epimerase GNE09_22385 PF13456 Reverse transcriptase-like GNE09_22405 PF13673 Acetyltransferase (GNAT) domain GNE09_22405 PF18014 Acetyltransferase (GNAT) domain GNE09_22420 PF00534 Glycosyl transferases group 1 GNE09_22420 PF13439 Glycosyltransferase Family 4 GNE09_22425 PF00535 Glycosyl transferase family 2 GNE09_22465 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain GNE09_22465 PF01367 5'-3' exonuclease, C-terminal SAM fold GNE09_22470 PF00689 Cation transporting ATPase, C-terminus GNE09_22470 PF00690 Cation transporter/ATPase, N-terminus GNE09_22480 PF03738 Glutathionylspermidine synthase preATP-grasp GNE09_22505 PF00581 Rhodanese-like domain GNE09_22510 PF10752 Protein of unknown function (DUF2533) GNE09_22515 PF00583 Acetyltransferase (GNAT) family GNE09_22530 PF04235 Protein of unknown function (DUF418) GNE09_22535 PF00860 Permease family GNE09_22540 PF00156 Phosphoribosyl transferase domain GNE09_22550 PF01636 Phosphotransferase enzyme family GNE09_22560 PF02074 Carboxypeptidase Taq (M32) metallopeptidase GNE09_22565 PF13307 Helicase C-terminal domain GNE09_22575 PF01170 Putative RNA methylase family UPF0020 GNE09_22575 PF02926 THUMP domain GNE09_22590 PF06908 YspA SLOG family GNE09_22620 PF10720 Protein of unknown function (DUF2515) GNE09_22625 PF03838 Recombination protein U GNE09_22630 PF00912 Transglycosylase GNE09_22630 PF00905 Penicillin binding protein transpeptidase domain GNE09_22640 PF00730 HhH-GPD superfamily base excision DNA repair protein GNE09_22640 PF00633 Helix-hairpin-helix motif GNE09_22640 PF10576 Iron-sulfur binding domain of endonuclease III GNE09_22645 PF07261 Replication initiation and membrane attachment GNE09_22650 PF00155 Aminotransferase class I and II GNE09_22660 PF14084 Protein of unknown function (DUF4264) GNE09_22670 PF02261 Aspartate decarboxylase GNE09_22675 PF02569 Pantoate-beta-alanine ligase GNE09_22680 PF02548 Ketopantoate hydroxymethyltransferase GNE09_22690 PF08279 HTH domain GNE09_22690 PF03099 Biotin/lipoate A/B protein ligase family GNE09_22690 PF02237 Biotin protein ligase C terminal domain GNE09_22695 PF13735 tRNA nucleotidyltransferase domain 2 putative GNE09_22695 PF12627 Probable RNA and SrmB- binding site of polymerase A GNE09_22695 PF01743 Poly A polymerase head domain GNE09_22705 PF02585 GlcNAc-PI de-N-acetylase GNE09_22710 PF02142 MGS-like domain GNE09_22715 PF01113 Dihydrodipicolinate reductase, N-terminus GNE09_22715 PF05173 Dihydrodipicolinate reductase, C-terminus GNE09_22720 PF03819 MazG nucleotide pyrophosphohydrolase domain GNE09_22725 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) GNE09_22725 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 GNE09_22735 PF04298 Putative neutral zinc metallopeptidase GNE09_22740 PF09577 Sporulation protein YpjB (SpoYpjB) GNE09_22750 PF07187 Protein of unknown function (DUF1405) GNE09_22755 PF13442 Cytochrome C oxidase, cbb3-type, subunit III GNE09_22755 PF00032 Cytochrome b(C-terminal)/b6/petD GNE09_22760 PF00033 Cytochrome b/b6/petB GNE09_22765 PF00355 Rieske [2Fe-2S] domain GNE09_22770 PF10673 Protein of unknown function (DUF2487) GNE09_22775 PF08864 UPF0302 domain GNE09_22775 PF08858 IDEAL domain GNE09_22785 PF00155 Aminotransferase class I and II GNE09_22790 PF01761 3-dehydroquinate synthase GNE09_22795 PF01264 Chorismate synthase GNE09_22800 PF00334 Nucleoside diphosphate kinase GNE09_22805 PF00348 Polyprenyl synthetase GNE09_22810 PF01209 ubiE/COQ5 methyltransferase family GNE09_22815 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 GNE09_22820 PF01227 GTP cyclohydrolase I GNE09_22825 PF00216 Bacterial DNA-binding protein GNE09_22830 PF09547 Stage IV sporulation protein A (spore_IV_A) GNE09_22840 PF10966 Protein of unknown function (DUF2768) GNE09_22850 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus GNE09_22850 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus GNE09_22855 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal GNE09_22855 PF01926 50S ribosome-binding GTPase GNE09_22865 PF14045 YIEGIA protein GNE09_22875 PF14140 YpzI-like protein GNE09_22880 PF01070 FMN-dependent dehydrogenase GNE09_22890 PF02224 Cytidylate kinase GNE09_22895 PF00710 Asparaginase, N-terminal GNE09_22895 PF17763 Glutaminase/Asparaginase C-terminal domain GNE09_22920 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase GNE09_22920 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain GNE09_22925 PF05389 Negative regulator of genetic competence (MecA) GNE09_22930 PF13411 MerR HTH family regulatory protein GNE09_22935 PF00149 Calcineurin-like phosphoesterase GNE09_22950 PF00270 DEAD/DEAH box helicase GNE09_22950 PF00271 Helicase conserved C-terminal domain GNE09_22965 PF12822 ECF transporter, substrate-specific component GNE09_22980 PF01923 Cobalamin adenosyltransferase GNE09_22985 PF18698 Histidine kinase sensor domain GNE09_22985 PF00672 HAMP domain GNE09_22985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNE09_22985 PF00989 PAS fold GNE09_22985 PF00512 His Kinase A (phospho-acceptor) domain GNE09_22990 PF00486 Transcriptional regulatory protein, C terminal GNE09_22990 PF00072 Response regulator receiver domain GNE09_22995 PF01578 Cytochrome C assembly protein GNE09_23000 PF05140 ResB-like family GNE09_23005 PF00578 AhpC/TSA family GNE09_23010 PF01479 S4 domain GNE09_23010 PF00849 RNA pseudouridylate synthase GNE09_23015 PF07670 Nucleoside recognition GNE09_23020 PF07670 Nucleoside recognition GNE09_23025 PF07943 Penicillin-binding protein 5, C-terminal domain GNE09_23025 PF00768 D-alanyl-D-alanine carboxypeptidase GNE09_23045 PF03706 Lysylphosphatidylglycerol synthase TM region GNE09_23045 PF09924 Uncharacterised conserved protein (DUF2156) GNE09_23055 PF01048 Phosphorylase superfamily GNE09_23065 PF00589 Phage integrase family GNE09_23075 PF01904 Protein of unknown function DUF72 GNE09_23080 PF00989 PAS fold GNE09_23080 PF00512 His Kinase A (phospho-acceptor) domain GNE09_23080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNE09_23095 PF00905 Penicillin binding protein transpeptidase domain GNE09_23095 PF00912 Transglycosylase GNE09_23100 PF01865 Protein of unknown function DUF47 GNE09_23105 PF01384 Phosphate transporter family GNE09_23110 PF01925 Sulfite exporter TauE/SafE GNE09_23150 PF01209 ubiE/COQ5 methyltransferase family GNE09_23160 PF05525 Branched-chain amino acid transport protein GNE09_23170 PF00072 Response regulator receiver domain GNE09_23170 PF00196 Bacterial regulatory proteins, luxR family GNE09_23175 PF07730 Histidine kinase GNE09_23175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNE09_23175 PF00672 HAMP domain GNE09_23180 PF09922 Cell wall-active antibiotics response 4TMS YvqF GNE09_23195 PF03553 Na+/H+ antiporter family GNE09_23205 PF00375 Sodium:dicarboxylate symporter family GNE09_23215 PF00209 Sodium:neurotransmitter symporter family GNE09_23225 PF01903 CbiX GNE09_23230 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GNE09_23240 PF01077 Nitrite and sulphite reductase 4Fe-4S domain GNE09_23240 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain GNE09_23250 PF01747 ATP-sulfurylase GNE09_23250 PF14306 PUA-like domain GNE09_23255 PF01507 Phosphoadenosine phosphosulfate reductase family GNE09_23265 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain GNE09_23265 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain GNE09_23275 PF00884 Sulfatase GNE09_23280 PF01066 CDP-alcohol phosphatidyltransferase GNE09_23285 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GNE09_23285 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GNE09_23295 PF02811 PHP domain GNE09_23300 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase GNE09_23305 PF01502 Phosphoribosyl-AMP cyclohydrolase GNE09_23310 PF00977 Histidine biosynthesis protein GNE09_23315 PF00977 Histidine biosynthesis protein GNE09_23320 PF00117 Glutamine amidotransferase class-I GNE09_23325 PF00475 Imidazoleglycerol-phosphate dehydratase GNE09_23330 PF00815 Histidinol dehydrogenase GNE09_23335 PF01634 ATP phosphoribosyltransferase GNE09_23345 PF00694 Aconitase C-terminal domain GNE09_23350 PF00330 Aconitase family (aconitate hydratase) GNE09_23355 PF00180 Isocitrate/isopropylmalate dehydrogenase GNE09_23360 PF08502 LeuA allosteric (dimerisation) domain GNE09_23360 PF00682 HMGL-like GNE09_23365 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain GNE09_23365 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain GNE09_23370 PF01842 ACT domain GNE09_23370 PF10369 Small subunit of acetolactate synthase GNE09_23375 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GNE09_23375 PF00205 Thiamine pyrophosphate enzyme, central domain GNE09_23375 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GNE09_23380 PF01063 Amino-transferase class IV GNE09_23390 PF03698 Uncharacterised protein family (UPF0180) GNE09_23400 PF09579 Sporulation protein YtfJ (Spore_YtfJ) GNE09_23410 PF02386 Cation transport protein GNE09_23415 PF00375 Sodium:dicarboxylate symporter family GNE09_23425 PF01047 MarR family GNE09_23440 PF02673 Bacitracin resistance protein BacA GNE09_23445 PF01554 MatE GNE09_23460 PF01636 Phosphotransferase enzyme family GNE09_23470 PF00258 Flavodoxin GNE09_23485 PF13193 AMP-binding enzyme C-terminal domain GNE09_23485 PF00501 AMP-binding enzyme GNE09_23490 PF03062 MBOAT, membrane-bound O-acyltransferase family GNE09_23495 PF00550 Phosphopantetheine attachment site GNE09_23500 PF04914 DltD protein GNE09_23505 PF03060 Nitronate monooxygenase GNE09_23510 PF02016 LD-carboxypeptidase N-terminal domain GNE09_23510 PF17676 LD-carboxypeptidase C-terminal domain GNE09_23520 PF00857 Isochorismatase family GNE09_23530 PF01037 Lrp/AsnC ligand binding domain GNE09_23550 PF00005 ABC transporter GNE09_23560 PF00005 ABC transporter GNE09_23565 PF00392 Bacterial regulatory proteins, gntR family GNE09_23570 PF00268 Ribonucleotide reductase, small chain GNE09_23575 PF02867 Ribonucleotide reductase, barrel domain GNE09_23575 PF00317 Ribonucleotide reductase, all-alpha domain GNE09_23575 PF08343 Ribonucleotide reductase N-terminal GNE09_23580 PF07972 NrdI Flavodoxin like GNE09_23605 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) GNE09_23615 PF04055 Radical SAM superfamily GNE09_23620 PF01242 6-pyruvoyl tetrahydropterin synthase GNE09_23625 PF06508 Queuosine biosynthesis protein QueC GNE09_23630 PF13426 PAS domain GNE09_23630 PF00512 His Kinase A (phospho-acceptor) domain GNE09_23630 PF00989 PAS fold GNE09_23630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNE09_23630 PF13188 PAS domain GNE09_23635 PF12867 DinB superfamily GNE09_23645 PF01047 MarR family GNE09_23650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNE09_23650 PF02743 Cache domain GNE09_23650 PF00512 His Kinase A (phospho-acceptor) domain GNE09_23655 PF09388 Spo0E like sporulation regulatory protein GNE09_23660 PF04748 Divergent polysaccharide deacetylase GNE09_23670 PF00596 Class II Aldolase and Adducin N-terminal domain GNE09_23680 PF08220 DeoR-like helix-turn-helix domain GNE09_23680 PF00455 DeoR C terminal sensor domain GNE09_23690 PF00266 Aminotransferase class-V GNE09_23695 PF13419 Haloacid dehalogenase-like hydrolase GNE09_23700 PF00528 Binding-protein-dependent transport system inner membrane component GNE09_23705 PF08402 TOBE domain GNE09_23705 PF00005 ABC transporter GNE09_23720 PF02386 Cation transport protein GNE09_23730 PF00561 alpha/beta hydrolase fold GNE09_23755 PF01575 MaoC like domain GNE09_23760 PF00269 Small, acid-soluble spore proteins, alpha/beta type GNE09_23765 PF02386 Cation transport protein GNE09_23770 PF03741 Integral membrane protein TerC family GNE09_23775 PF01226 Formate/nitrite transporter GNE09_23785 PF06750 Bacterial Peptidase A24 N-terminal domain GNE09_23785 PF01478 Type IV leader peptidase family GNE09_23790 PF02589 LUD domain GNE09_23795 PF02589 LUD domain GNE09_23795 PF13183 4Fe-4S dicluster domain GNE09_23795 PF11870 Domain of unknown function (DUF3390) GNE09_23800 PF02754 Cysteine-rich domain GNE09_23805 PF07729 FCD domain GNE09_23805 PF00392 Bacterial regulatory proteins, gntR family GNE09_23810 PF18698 Histidine kinase sensor domain GNE09_23810 PF00512 His Kinase A (phospho-acceptor) domain GNE09_23810 PF00672 HAMP domain GNE09_23810 PF00989 PAS fold GNE09_23810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNE09_23815 PF00072 Response regulator receiver domain GNE09_23815 PF00486 Transcriptional regulatory protein, C terminal GNE09_23825 PF05651 Putative sugar diacid recognition GNE09_23825 PF17853 GGDEF-like domain GNE09_23825 PF13556 PucR C-terminal helix-turn-helix domain GNE09_23830 PF02913 FAD linked oxidases, C-terminal domain GNE09_23830 PF01565 FAD binding domain GNE09_23835 PF13183 4Fe-4S dicluster domain GNE09_23835 PF02754 Cysteine-rich domain GNE09_23840 PF00188 Cysteine-rich secretory protein family GNE09_23850 PF01479 S4 domain GNE09_23850 PF00849 RNA pseudouridylate synthase GNE09_23860 PF03176 MMPL family GNE09_23865 PF01569 PAP2 superfamily GNE09_23870 PF13416 Bacterial extracellular solute-binding protein GNE09_23875 PF00528 Binding-protein-dependent transport system inner membrane component GNE09_23880 PF00528 Binding-protein-dependent transport system inner membrane component GNE09_23890 PF00171 Aldehyde dehydrogenase family GNE09_23895 PF05547 Immune inhibitor A peptidase M6 GNE09_23905 PF01381 Helix-turn-helix GNE09_23905 PF08671 Anti-repressor SinI GNE09_23910 PF12389 Camelysin metallo-endopeptidase GNE09_23920 PF12389 Camelysin metallo-endopeptidase GNE09_23930 PF00768 D-alanyl-D-alanine carboxypeptidase GNE09_23930 PF07943 Penicillin-binding protein 5, C-terminal domain GNE09_23940 PF13649 Methyltransferase domain GNE09_23980 PF01381 Helix-turn-helix GNE09_23985 PF02779 Transketolase, pyrimidine binding domain GNE09_23985 PF16870 2-oxoglutarate dehydrogenase C-terminal GNE09_23985 PF00676 Dehydrogenase E1 component GNE09_23990 PF02817 e3 binding domain GNE09_23990 PF00364 Biotin-requiring enzyme GNE09_23990 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) GNE09_24005 PF00881 Nitroreductase family GNE09_24020 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GNE09_24020 PF07992 Pyridine nucleotide-disulphide oxidoreductase GNE09_24045 PF10042 Uncharacterized conserved protein (DUF2278) GNE09_24055 PF02652 L-lactate permease GNE09_24065 PF00290 Tryptophan synthase alpha chain GNE09_24070 PF00291 Pyridoxal-phosphate dependent enzyme GNE09_24075 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase GNE09_24080 PF00218 Indole-3-glycerol phosphate synthase GNE09_24085 PF00591 Glycosyl transferase family, a/b domain GNE09_24085 PF02885 Glycosyl transferase family, helical bundle domain GNE09_24090 PF00591 Glycosyl transferase family, a/b domain GNE09_24090 PF02885 Glycosyl transferase family, helical bundle domain GNE09_24090 PF00117 Glutamine amidotransferase class-I GNE09_24100 PF00474 Sodium:solute symporter family GNE09_24105 PF02368 Bacterial Ig-like domain (group 2) GNE09_24120 PF00756 Putative esterase GNE09_24130 PF13673 Acetyltransferase (GNAT) domain GNE09_24135 PF13361 UvrD-like helicase C-terminal domain GNE09_24135 PF00580 UvrD/REP helicase N-terminal domain GNE09_24155 PF07098 Protein of unknown function (DUF1360) GNE09_24175 PF04321 RmlD substrate binding domain GNE09_24180 PF16363 GDP-mannose 4,6 dehydratase GNE09_24185 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase GNE09_24190 PF00483 Nucleotidyl transferase GNE09_24210 PF00535 Glycosyl transferase family 2 GNE09_24210 PF13181 Tetratricopeptide repeat GNE09_24220 PF05711 Macrocin-O-methyltransferase (TylF) GNE09_24225 PF08241 Methyltransferase domain GNE09_24230 PF00535 Glycosyl transferase family 2 GNE09_24235 PF01098 Cell cycle protein GNE09_24240 PF00149 Calcineurin-like phosphoesterase GNE09_24250 PF00849 RNA pseudouridylate synthase GNE09_24255 PF01513 ATP-NAD kinase GNE09_24260 PF04607 Region found in RelA / SpoT proteins GNE09_24270 PF01928 CYTH domain GNE09_24275 PF01152 Bacterial-like globin GNE09_24285 PF01432 Peptidase family M3 GNE09_24285 PF08439 Oligopeptidase F GNE09_24295 PF13091 PLD-like domain GNE09_24295 PF13396 Phospholipase_D-nuclease N-terminal GNE09_24300 PF05389 Negative regulator of genetic competence (MecA) GNE09_24305 PF03741 Integral membrane protein TerC family GNE09_24310 PF03960 ArsC family GNE09_24320 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GNE09_24325 PF01554 MatE GNE09_24330 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GNE09_24330 PF00005 ABC transporter GNE09_24335 PF00005 ABC transporter GNE09_24335 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GNE09_24340 PF00528 Binding-protein-dependent transport system inner membrane component GNE09_24340 PF12911 N-terminal TM domain of oligopeptide transport permease C GNE09_24345 PF00528 Binding-protein-dependent transport system inner membrane component GNE09_24350 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GNE09_24360 PF00579 tRNA synthetases class I (W and Y) GNE09_24365 PF12227 Protein of unknown function (DUF3603) GNE09_24370 PF10026 Predicted Zn-dependent protease (DUF2268) GNE09_24375 PF00109 Beta-ketoacyl synthase, N-terminal domain GNE09_24375 PF02801 Beta-ketoacyl synthase, C-terminal domain GNE09_24380 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal GNE09_24380 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GNE09_24385 PF10815 ComZ GNE09_24405 PF10431 C-terminal, D2-small domain, of ClpB protein GNE09_24405 PF02861 Clp amino terminal domain, pathogenicity island component GNE09_24405 PF00004 ATPase family associated with various cellular activities (AAA) GNE09_24405 PF17871 AAA lid domain GNE09_24405 PF07724 AAA domain (Cdc48 subfamily) GNE09_24410 PF14168 YjzC-like protein GNE09_24425 PF12758 Protein of unknown function (DUF3813) GNE09_24430 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) GNE09_24430 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 GNE09_24475 PF13509 S1 domain GNE09_24475 PF17783 CvfB-like winged helix domain GNE09_24480 PF04461 Protein of unknown function (DUF520) GNE09_24490 PF00128 Alpha amylase, catalytic domain GNE09_24495 PF00909 Ammonium Transporter Family GNE09_24500 PF00199 Catalase GNE09_24500 PF06628 Catalase-related immune-responsive GNE09_24510 PF00733 Asparagine synthase GNE09_24510 PF13537 Glutamine amidotransferase domain GNE09_24520 PF07457 Protein of unknown function (DUF1516) GNE09_24525 PF00202 Aminotransferase class-III GNE09_24535 PF01557 Fumarylacetoacetate (FAA) hydrolase family GNE09_24540 PF09388 Spo0E like sporulation regulatory protein GNE09_24545 PF10676 Spore germination protein gerPA/gerPF GNE09_24550 PF10803 Spore germination GerPB GNE09_24555 PF10737 Spore germination protein GerPC GNE09_24565 PF10970 Spore germination protein GerPE GNE09_24570 PF10676 Spore germination protein gerPA/gerPF GNE09_24580 PF12705 PD-(D/E)XK nuclease superfamily GNE09_24580 PF00580 UvrD/REP helicase N-terminal domain GNE09_24580 PF13361 UvrD-like helicase C-terminal domain GNE09_24585 PF13361 UvrD-like helicase C-terminal domain GNE09_24585 PF12705 PD-(D/E)XK nuclease superfamily GNE09_24590 PF10502 Signal peptidase, peptidase S26 GNE09_24595 PF09335 SNARE associated Golgi protein GNE09_24600 PF06338 ComK protein GNE09_24615 PF00313 'Cold-shock' DNA-binding domain GNE09_24630 PF00463 Isocitrate lyase family GNE09_24635 PF01274 Malate synthase GNE09_24645 PF00331 Glycosyl hydrolase family 10 GNE09_24645 PF00395 S-layer homology domain GNE09_24645 PF02018 Carbohydrate binding domain GNE09_24645 PF06452 Carbohydrate family 9 binding domain-like GNE09_24655 PF00672 HAMP domain GNE09_24655 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GNE09_24655 PF02743 Cache domain GNE09_24660 PF01435 Peptidase family M48 GNE09_24660 PF16491 CAAX prenyl protease N-terminal, five membrane helices GNE09_24680 PF00486 Transcriptional regulatory protein, C terminal GNE09_24680 PF00072 Response regulator receiver domain GNE09_24685 PF00512 His Kinase A (phospho-acceptor) domain GNE09_24685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNE09_24695 PF06445 GyrI-like small molecule binding domain GNE09_24695 PF12833 Helix-turn-helix domain GNE09_24700 PF04542 Sigma-70 region 2 GNE09_24700 PF08281 Sigma-70, region 4 GNE09_24715 PF01966 HD domain GNE09_24720 PF00149 Calcineurin-like phosphoesterase GNE09_24725 PF12146 Serine aminopeptidase, S33 GNE09_24735 PF07968 Leukocidin/Hemolysin toxin family GNE09_24770 PF05593 RHS Repeat GNE09_24780 PF13193 AMP-binding enzyme C-terminal domain GNE09_24780 PF00501 AMP-binding enzyme GNE09_24790 PF10437 Bacterial lipoate protein ligase C-terminus GNE09_24790 PF03099 Biotin/lipoate A/B protein ligase family GNE09_24795 PF12706 Beta-lactamase superfamily domain GNE09_24800 PF14149 YhfH-like protein GNE09_24835 PF00440 Bacterial regulatory proteins, tetR family GNE09_24835 PF17932 Tetracyclin repressor-like, C-terminal domain GNE09_24870 PF01208 Uroporphyrinogen decarboxylase (URO-D) GNE09_24875 PF00912 Transglycosylase GNE09_24875 PF00905 Penicillin binding protein transpeptidase domain GNE09_24880 PF03992 Antibiotic biosynthesis monooxygenase GNE09_24890 PF03703 Bacterial PH domain GNE09_24895 PF00892 EamA-like transporter family GNE09_24905 PF10014 2OG-Fe dioxygenase GNE09_24930 PF03703 Bacterial PH domain GNE09_24935 PF03703 Bacterial PH domain GNE09_24940 PF00440 Bacterial regulatory proteins, tetR family GNE09_24940 PF17934 Tetracyclin repressor-like, C-terminal domain GNE09_24950 PF12787 EcsC protein family GNE09_24955 PF05975 Bacterial ABC transporter protein EcsB GNE09_24960 PF00005 ABC transporter GNE09_24965 PF01230 HIT domain GNE09_24970 PF12732 YtxH-like protein GNE09_24975 PF01047 MarR family GNE09_24995 PF13538 UvrD-like helicase C-terminal domain GNE09_25010 PF08281 Sigma-70, region 4 GNE09_25010 PF04542 Sigma-70 region 2 GNE09_25020 PF03551 Transcriptional regulator PadR-like family GNE09_25025 PF16901 C-terminal domain of alpha-glycerophosphate oxidase GNE09_25025 PF01266 FAD dependent oxidoreductase GNE09_25030 PF00370 FGGY family of carbohydrate kinases, N-terminal domain GNE09_25030 PF02782 FGGY family of carbohydrate kinases, C-terminal domain GNE09_25035 PF00230 Major intrinsic protein GNE09_25040 PF04309 Glycerol-3-phosphate responsive antiterminator GNE09_25045 PF01381 Helix-turn-helix GNE09_25050 PF00190 Cupin GNE09_25060 PF14147 Sporulation protein YhaL GNE09_25065 PF00561 alpha/beta hydrolase fold GNE09_25065 PF08386 TAP-like protein GNE09_25075 PF18801 response regulator aspartate phosphatase H, N terminal GNE09_25075 PF17874 MalT-like TPR region GNE09_25080 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GNE09_25085 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GNE09_25090 PF01810 LysE type translocator GNE09_25100 PF01966 HD domain GNE09_25100 PF01336 OB-fold nucleic acid binding domain GNE09_25105 PF13514 AAA domain GNE09_25110 PF00149 Calcineurin-like phosphoesterase GNE09_25125 PF11121 Protein of unknown function (DUF2639) GNE09_25130 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family GNE09_25140 PF07282 Putative transposase DNA-binding domain GNE09_25140 PF01385 Probable transposase GNE09_25140 PF12323 Helix-turn-helix domain GNE09_25170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNE09_25170 PF00512 His Kinase A (phospho-acceptor) domain GNE09_25170 PF01627 Hpt domain GNE09_25170 PF00072 Response regulator receiver domain GNE09_25175 PF01739 CheR methyltransferase, SAM binding domain GNE09_25175 PF03705 CheR methyltransferase, all-alpha domain GNE09_25180 PF13426 PAS domain GNE09_25180 PF07228 Stage II sporulation protein E (SpoIIE) GNE09_25190 PF04545 Sigma-70, region 4 GNE09_25190 PF04539 Sigma-70 region 3 GNE09_25190 PF04542 Sigma-70 region 2 GNE09_25195 PF13581 Histidine kinase-like ATPase domain GNE09_25200 PF01740 STAS domain GNE09_25215 PF05532 CsbD-like GNE09_25220 PF11181 Heat induced stress protein YflT GNE09_25260 PF00395 S-layer homology domain GNE09_25285 PF02082 Transcriptional regulator GNE09_25290 PF02525 Flavodoxin-like fold GNE09_25305 PF02733 Dak1 domain GNE09_25320 PF07690 Major Facilitator Superfamily GNE09_25330 PF01066 CDP-alcohol phosphatidyltransferase GNE09_25395 PF13026 Protein of unknown function (DUF3887) GNE09_25395 PF12146 Serine aminopeptidase, S33 GNE09_25430 PF13302 Acetyltransferase (GNAT) domain GNE09_25435 PF09680 Family of unknown function GNE09_25450 PF07690 Major Facilitator Superfamily GNE09_25460 PF01925 Sulfite exporter TauE/SafE GNE09_25475 PF00772 DnaB-like helicase N terminal domain GNE09_25475 PF03796 DnaB-like helicase C terminal domain GNE09_25485 PF17762 HTH domain found in ParB protein GNE09_25485 PF02195 ParB-like nuclease domain GNE09_25515 PF08463 EcoEI R protein C-terminal GNE09_25515 PF00271 Helicase conserved C-terminal domain GNE09_25515 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) GNE09_25515 PF04851 Type III restriction enzyme, res subunit GNE09_25520 PF00293 NUDIX domain GNE09_25525 PF03401 Tripartite tricarboxylate transporter family receptor GNE09_25530 PF12431 Transcriptional regulator GNE09_25530 PF00072 Response regulator receiver domain GNE09_25530 PF08279 HTH domain GNE09_25540 PF00083 Sugar (and other) transporter GNE09_25595 PF04740 LXG domain of WXG superfamily GNE09_25595 PF14436 Bacterial EndoU nuclease GNE09_25610 PF06013 Proteins of 100 residues with WXG GNE09_25655 PF04740 LXG domain of WXG superfamily GNE09_25655 PF14436 Bacterial EndoU nuclease GNE09_25670 PF06013 Proteins of 100 residues with WXG GNE09_25700 PF05977 Transmembrane secretion effector GNE09_25705 PF00899 ThiF family GNE09_25720 PF00206 Lyase GNE09_25720 PF10397 Adenylosuccinate lyase C-terminus GNE09_25740 PF16123 Hydroxyacylglutathione hydrolase C-terminus GNE09_25740 PF00753 Metallo-beta-lactamase superfamily GNE09_25750 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GNE09_25750 PF00005 ABC transporter GNE09_25755 PF00005 ABC transporter GNE09_25755 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GNE09_25760 PF00528 Binding-protein-dependent transport system inner membrane component GNE09_25760 PF12911 N-terminal TM domain of oligopeptide transport permease C GNE09_25765 PF00528 Binding-protein-dependent transport system inner membrane component GNE09_25770 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GNE09_25775 PF02423 Ornithine cyclodeaminase/mu-crystallin family GNE09_25780 PF05544 Proline racemase GNE09_25785 PF11121 Protein of unknown function (DUF2639) GNE09_25795 PF00395 S-layer homology domain GNE09_25795 PF01520 N-acetylmuramoyl-L-alanine amidase GNE09_25800 PF05343 M42 glutamyl aminopeptidase GNE09_25820 PF00378 Enoyl-CoA hydratase/isomerase GNE09_25840 PF01943 Polysaccharide biosynthesis protein GNE09_25840 PF14667 Polysaccharide biosynthesis C-terminal domain GNE09_25845 PF01740 STAS domain GNE09_25845 PF00916 Sulfate permease family GNE09_25855 PF13193 AMP-binding enzyme C-terminal domain GNE09_25855 PF00501 AMP-binding enzyme GNE09_25860 PF04055 Radical SAM superfamily GNE09_25865 PF01510 N-acetylmuramoyl-L-alanine amidase GNE09_25865 PF01471 Putative peptidoglycan binding domain GNE09_25870 PF17961 Bacterial Ig domain GNE09_25870 PF04650 YSIRK type signal peptide GNE09_25870 PF10425 C-terminus of bacterial fibrinogen-binding adhesin GNE09_25870 PF00746 LPXTG cell wall anchor motif GNE09_25870 PF17210 SdrD B-like domain GNE09_25880 PF02245 Methylpurine-DNA glycosylase (MPG) GNE09_25885 PF03306 Alpha-acetolactate decarboxylase GNE09_25890 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GNE09_25890 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GNE09_25890 PF00205 Thiamine pyrophosphate enzyme, central domain GNE09_25905 PF06133 Control of competence regulator ComK, YlbF/YmcA GNE09_25910 PF04286 Protein of unknown function (DUF445) GNE09_25920 PF14398 YheC/D like ATP-grasp GNE09_25930 PF00269 Small, acid-soluble spore proteins, alpha/beta type GNE09_25935 PF00005 ABC transporter GNE09_25940 PF00528 Binding-protein-dependent transport system inner membrane component GNE09_25945 PF00497 Bacterial extracellular solute-binding proteins, family 3 GNE09_25950 PF00664 ABC transporter transmembrane region GNE09_25950 PF00005 ABC transporter GNE09_25955 PF00005 ABC transporter GNE09_25955 PF00664 ABC transporter transmembrane region GNE09_25960 PF00171 Aldehyde dehydrogenase family GNE09_25965 PF13520 Amino acid permease GNE09_25975 PF18011 C-terminal domain found in long catalases GNE09_25975 PF00199 Catalase GNE09_25975 PF06628 Catalase-related immune-responsive GNE09_25980 PF01965 DJ-1/PfpI family GNE09_25990 PF02525 Flavodoxin-like fold GNE09_26000 PF01638 HxlR-like helix-turn-helix GNE09_26010 PF17934 Tetracyclin repressor-like, C-terminal domain GNE09_26010 PF00440 Bacterial regulatory proteins, tetR family GNE09_26020 PF00893 Small Multidrug Resistance protein GNE09_26025 PF13411 MerR HTH family regulatory protein GNE09_26030 PF00106 short chain dehydrogenase GNE09_26040 PF01037 Lrp/AsnC ligand binding domain GNE09_26045 PF00892 EamA-like transporter family GNE09_26060 PF07681 DoxX GNE09_26070 PF02378 Phosphotransferase system, EIIC GNE09_26070 PF00367 phosphotransferase system, EIIB GNE09_26075 PF13580 SIS domain GNE09_26080 PF01418 Helix-turn-helix domain, rpiR family GNE09_26080 PF01380 SIS domain GNE09_26090 PF00999 Sodium/hydrogen exchanger family GNE09_26125 PF09335 SNARE associated Golgi protein GNE09_26135 PF02735 Ku70/Ku80 beta-barrel domain GNE09_26150 PF11007 Spore coat associated protein JA (CotJA) GNE09_26155 PF12652 CotJB protein GNE09_26160 PF05067 Manganese containing catalase GNE09_26165 PF05525 Branched-chain amino acid transport protein GNE09_26180 PF09529 Integral membrane protein (intg_mem_TP0381) GNE09_26195 PF12704 MacB-like periplasmic core domain GNE09_26195 PF02687 FtsX-like permease family GNE09_26200 PF06725 3D domain GNE09_26200 PF01476 LysM domain GNE09_26220 PF02378 Phosphotransferase system, EIIC GNE09_26225 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GNE09_26230 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit GNE09_26235 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GNE09_26235 PF08279 HTH domain GNE09_26235 PF00874 PRD domain GNE09_26235 PF05043 Mga helix-turn-helix domain GNE09_26245 PF07690 Major Facilitator Superfamily GNE09_26250 PF02690 Na+/Pi-cotransporter GNE09_26255 PF08240 Alcohol dehydrogenase GroES-like domain GNE09_26255 PF00107 Zinc-binding dehydrogenase GNE09_26260 PF03816 Cell envelope-related transcriptional attenuator domain GNE09_26270 PF01925 Sulfite exporter TauE/SafE GNE09_26275 PF13686 DsrE/DsrF/DrsH-like family GNE09_26285 PF00581 Rhodanese-like domain GNE09_26285 PF01206 Sulfurtransferase TusA GNE09_26290 PF01206 Sulfurtransferase TusA GNE09_26295 PF00753 Metallo-beta-lactamase superfamily GNE09_26295 PF00581 Rhodanese-like domain GNE09_26300 PF01206 Sulfurtransferase TusA GNE09_26300 PF00581 Rhodanese-like domain GNE09_26305 PF02583 Metal-sensitive transcriptional repressor GNE09_26310 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GNE09_26310 PF07992 Pyridine nucleotide-disulphide oxidoreductase GNE09_26325 PF09339 IclR helix-turn-helix domain GNE09_26325 PF01614 Bacterial transcriptional regulator GNE09_26365 PF04293 SpoVR like protein GNE09_26370 PF00881 Nitroreductase family GNE09_26380 PF03323 Bacillus/Clostridium GerA spore germination protein GNE09_26390 PF03845 Spore germination protein GNE09_26400 PF14148 YhdB-like protein GNE09_26405 PF02600 Disulfide bond formation protein DsbB GNE09_26410 PF00085 Thioredoxin GNE09_26425 PF17969 L,D-transpeptidase C-terminal domain GNE09_26425 PF03734 L,D-transpeptidase catalytic domain GNE09_26435 PF00860 Permease family GNE09_26445 PF00005 ABC transporter GNE09_26470 PF01047 MarR family GNE09_26475 PF07690 Major Facilitator Superfamily GNE09_26480 PF02702 Osmosensitive K+ channel His kinase sensor domain GNE09_26485 PF02669 K+-transporting ATPase, c chain GNE09_26495 PF03814 Potassium-transporting ATPase A subunit GNE09_26520 PF10502 Signal peptidase, peptidase S26 GNE09_26525 PF00005 ABC transporter GNE09_26545 PF08543 Phosphomethylpyrimidine kinase GNE09_26550 PF00899 ThiF family GNE09_26555 PF05690 Thiazole biosynthesis protein ThiG GNE09_26560 PF02597 ThiS family GNE09_26565 PF01266 FAD dependent oxidoreductase GNE09_26570 PF02581 Thiamine monophosphate synthase GNE09_26575 PF09084 NMT1/THI5 like GNE09_26580 PF00528 Binding-protein-dependent transport system inner membrane component GNE09_26585 PF00005 ABC transporter GNE09_26590 PF03070 TENA/THI-4/PQQC family GNE09_26595 PF00246 Zinc carboxypeptidase GNE09_26595 PF08239 Bacterial SH3 domain GNE09_26610 PF00571 CBS domain GNE09_26730 PF00873 AcrB/AcrD/AcrF family GNE09_26740 PF00528 Binding-protein-dependent transport system inner membrane component GNE09_26745 PF00528 Binding-protein-dependent transport system inner membrane component GNE09_26750 PF12849 PBP superfamily domain GNE09_26755 PF02421 Ferrous iron transport protein B GNE09_26755 PF04023 FeoA domain GNE09_26755 PF17910 FeoB cytosolic helical domain GNE09_26755 PF07664 Ferrous iron transport protein B C terminus GNE09_26755 PF07670 Nucleoside recognition GNE09_26760 PF17910 FeoB cytosolic helical domain GNE09_26760 PF07664 Ferrous iron transport protein B C terminus GNE09_26760 PF07670 Nucleoside recognition GNE09_26760 PF02421 Ferrous iron transport protein B GNE09_26765 PF02421 Ferrous iron transport protein B GNE09_26765 PF07670 Nucleoside recognition GNE09_26765 PF17910 FeoB cytosolic helical domain GNE09_26765 PF07664 Ferrous iron transport protein B C terminus GNE09_26770 PF05504 Spore germination B3/ GerAC like, C-terminal GNE09_26775 PF03845 Spore germination protein GNE09_26780 PF03323 Bacillus/Clostridium GerA spore germination protein GNE09_26785 PF00474 Sodium:solute symporter family GNE09_26790 PF11755 Protein of unknown function (DUF3311) GNE09_26795 PF01546 Peptidase family M20/M25/M40 GNE09_26795 PF07687 Peptidase dimerisation domain GNE09_26800 PF13529 Peptidase_C39 like family GNE09_26805 PF00324 Amino acid permease GNE09_26810 PF02790 Cytochrome C oxidase subunit II, transmembrane domain GNE09_26815 PF00115 Cytochrome C and Quinol oxidase polypeptide I GNE09_26830 PF02080 TrkA-C domain GNE09_26830 PF00999 Sodium/hydrogen exchanger family GNE09_26830 PF02254 TrkA-N domain GNE09_26840 PF13673 Acetyltransferase (GNAT) domain GNE09_26855 PF00860 Permease family GNE09_26860 PF00324 Amino acid permease GNE09_26875 PF05525 Branched-chain amino acid transport protein GNE09_26880 PF00854 POT family GNE09_26890 PF04203 Sortase domain GNE09_26900 PF01381 Helix-turn-helix GNE09_26905 PF07501 G5 domain GNE09_26905 PF06725 3D domain GNE09_26905 PF03990 G5-linked-Ubiquitin-like domain GNE09_26910 PF02743 Cache domain GNE09_26910 PF00672 HAMP domain GNE09_26910 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GNE09_26915 PF02673 Bacitracin resistance protein BacA GNE09_27070 PF01609 Transposase DDE domain GNE09_27080 PF00005 ABC transporter GNE09_27100 PF04235 Protein of unknown function (DUF418) GNE09_27110 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin GNE09_27110 PF18277 AbrB C-terminal domain GNE09_27115 PF01494 FAD binding domain GNE09_27140 PF11799 impB/mucB/samB family C-terminal domain GNE09_27140 PF11798 IMS family HHH motif GNE09_27140 PF00817 impB/mucB/samB family GNE09_27155 PF00216 Bacterial DNA-binding protein GNE09_27160 PF00282 Pyridoxal-dependent decarboxylase conserved domain GNE09_27175 PF00392 Bacterial regulatory proteins, gntR family GNE09_27180 PF00005 ABC transporter GNE09_27195 PF00144 Beta-lactamase GNE09_27200 PF05139 Erythromycin esterase GNE09_27210 PF00486 Transcriptional regulatory protein, C terminal GNE09_27210 PF00072 Response regulator receiver domain GNE09_27215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNE09_27220 PF00005 ABC transporter GNE09_27225 PF02687 FtsX-like permease family GNE09_27240 PF01609 Transposase DDE domain GNE09_27250 PF00583 Acetyltransferase (GNAT) family GNE09_27255 PF01609 Transposase DDE domain GNE09_27260 PF00893 Small Multidrug Resistance protein GNE09_27265 PF00893 Small Multidrug Resistance protein GNE09_27270 PF00486 Transcriptional regulatory protein, C terminal GNE09_27270 PF00072 Response regulator receiver domain GNE09_27275 PF00512 His Kinase A (phospho-acceptor) domain GNE09_27275 PF00672 HAMP domain GNE09_27275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNE09_27275 PF00989 PAS fold GNE09_27280 PF00005 ABC transporter GNE09_27290 PF12389 Camelysin metallo-endopeptidase GNE09_27300 PF08281 Sigma-70, region 4 GNE09_27300 PF04542 Sigma-70 region 2 GNE09_27325 PF02574 Homocysteine S-methyltransferase GNE09_27330 PF00324 Amino acid permease GNE09_27335 PF07282 Putative transposase DNA-binding domain GNE09_27335 PF01385 Probable transposase GNE09_27335 PF12323 Helix-turn-helix domain GNE09_27350 PF00905 Penicillin binding protein transpeptidase domain GNE09_27350 PF00912 Transglycosylase GNE09_27360 PF00553 Cellulose binding domain GNE09_27360 PF00041 Fibronectin type III domain GNE09_27360 PF00704 Glycosyl hydrolases family 18 GNE09_27370 PF00082 Subtilase family GNE09_27400 PF01609 Transposase DDE domain GNE09_27425 PF01609 Transposase DDE domain GNE09_27440 PF00795 Carbon-nitrogen hydrolase GNE09_27445 PF00795 Carbon-nitrogen hydrolase GNE09_27450 PF00392 Bacterial regulatory proteins, gntR family GNE09_27450 PF00155 Aminotransferase class I and II GNE09_27475 PF07943 Penicillin-binding protein 5, C-terminal domain GNE09_27475 PF00768 D-alanyl-D-alanine carboxypeptidase GNE09_27485 PF00892 EamA-like transporter family GNE09_27490 PF01522 Polysaccharide deacetylase GNE09_27505 PF00005 ABC transporter GNE09_27545 PF02661 Fic/DOC family GNE09_27550 PF03315 Serine dehydratase beta chain GNE09_27550 PF01842 ACT domain GNE09_27555 PF03313 Serine dehydratase alpha chain GNE09_27565 PF01022 Bacterial regulatory protein, arsR family GNE09_27570 PF02743 Cache domain GNE09_27570 PF00672 HAMP domain GNE09_27570 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GNE09_27585 PF17209 Hfq protein GNE09_27620 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family GNE09_27625 PF00144 Beta-lactamase GNE09_27625 PF11954 Domain of unknown function (DUF3471) GNE09_27630 PF01098 Cell cycle protein GNE09_27640 PF00571 CBS domain GNE09_27640 PF01769 Divalent cation transporter GNE09_27640 PF03448 MgtE intracellular N domain GNE09_27655 PF13539 D-alanyl-D-alanine carboxypeptidase GNE09_27660 PF01471 Putative peptidoglycan binding domain GNE09_27660 PF01520 N-acetylmuramoyl-L-alanine amidase GNE09_27705 PF13495 Phage integrase, N-terminal SAM-like domain GNE09_27705 PF00589 Phage integrase family GNE09_27730 PF07681 DoxX GNE09_27755 PF01833 IPT/TIG domain GNE09_27755 PF00686 Starch binding domain GNE09_27755 PF00128 Alpha amylase, catalytic domain GNE09_27760 PF07690 Major Facilitator Superfamily GNE09_27780 PF00005 ABC transporter GNE09_27790 PF00486 Transcriptional regulatory protein, C terminal GNE09_27790 PF00072 Response regulator receiver domain GNE09_27795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNE09_27795 PF00672 HAMP domain GNE09_27795 PF00512 His Kinase A (phospho-acceptor) domain GNE09_27800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNE09_27805 PF00072 Response regulator receiver domain GNE09_27805 PF00486 Transcriptional regulatory protein, C terminal GNE09_27810 PF02687 FtsX-like permease family GNE09_27815 PF00005 ABC transporter GNE09_27820 PF12323 Helix-turn-helix domain GNE09_27820 PF07282 Putative transposase DNA-binding domain GNE09_27820 PF01385 Probable transposase GNE09_27825 PF01022 Bacterial regulatory protein, arsR family GNE09_27830 PF00005 ABC transporter GNE09_27850 PF18801 response regulator aspartate phosphatase H, N terminal GNE09_27870 PF01022 Bacterial regulatory protein, arsR family GNE09_27875 PF02600 Disulfide bond formation protein DsbB GNE09_27880 PF02600 Disulfide bond formation protein DsbB GNE09_27895 PF00565 Staphylococcal nuclease homologue GNE09_27900 PF06800 Sugar transport protein GNE09_27915 PF02677 Epoxyqueuosine reductase QueH GNE09_27920 PF08378 Nuclease-related domain GNE09_27945 PF01510 N-acetylmuramoyl-L-alanine amidase GNE09_27945 PF01476 LysM domain GNE09_27945 PF01471 Putative peptidoglycan binding domain GNE09_27975 PF00005 ABC transporter GNE09_27980 PF00664 ABC transporter transmembrane region GNE09_27980 PF00005 ABC transporter GNE09_27985 PF13575 Domain of unknown function (DUF4135) GNE09_27985 PF05147 Lanthionine synthetase C-like protein GNE09_28000 PF02195 ParB-like nuclease domain GNE09_28005 PF02423 Ornithine cyclodeaminase/mu-crystallin family GNE09_28010 PF00291 Pyridoxal-phosphate dependent enzyme GNE09_28015 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain GNE09_28015 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain GNE09_28020 PF01648 4'-phosphopantetheinyl transferase superfamily GNE09_28025 PF00501 AMP-binding enzyme GNE09_28025 PF00668 Condensation domain GNE09_28025 PF00550 Phosphopantetheine attachment site GNE09_28025 PF00975 Thioesterase domain GNE09_28025 PF13193 AMP-binding enzyme C-terminal domain GNE09_28045 PF00664 ABC transporter transmembrane region GNE09_28045 PF00005 ABC transporter GNE09_28050 PF00296 Luciferase-like monooxygenase GNE09_28065 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GNE09_28065 PF02770 Acyl-CoA dehydrogenase, middle domain GNE09_28065 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GNE09_28070 PF00550 Phosphopantetheine attachment site GNE09_28075 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain GNE09_28075 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain GNE09_28080 PF00698 Acyl transferase domain GNE09_28090 PF02770 Acyl-CoA dehydrogenase, middle domain GNE09_28090 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GNE09_28090 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GNE09_28100 PF00550 Phosphopantetheine attachment site GNE09_28100 PF00668 Condensation domain GNE09_28100 PF13193 AMP-binding enzyme C-terminal domain GNE09_28100 PF00501 AMP-binding enzyme GNE09_28105 PF00668 Condensation domain GNE09_28105 PF00550 Phosphopantetheine attachment site GNE09_28105 PF00975 Thioesterase domain GNE09_28105 PF13193 AMP-binding enzyme C-terminal domain GNE09_28105 PF00501 AMP-binding enzyme GNE09_28110 PF02801 Beta-ketoacyl synthase, C-terminal domain GNE09_28110 PF13193 AMP-binding enzyme C-terminal domain GNE09_28110 PF14765 Polyketide synthase dehydratase GNE09_28110 PF00550 Phosphopantetheine attachment site GNE09_28110 PF08659 KR domain GNE09_28110 PF02801 Beta-ketoacyl synthase, C-terminal domain GNE09_28110 PF00109 Beta-ketoacyl synthase, N-terminal domain GNE09_28110 PF00501 AMP-binding enzyme GNE09_28110 PF16197 Ketoacyl-synthetase C-terminal extension GNE09_28110 PF13193 AMP-binding enzyme C-terminal domain GNE09_28110 PF00501 AMP-binding enzyme GNE09_28110 PF14765 Polyketide synthase dehydratase GNE09_28110 PF00550 Phosphopantetheine attachment site GNE09_28110 PF08659 KR domain GNE09_28110 PF00668 Condensation domain GNE09_28110 PF00668 Condensation domain GNE09_28110 PF00109 Beta-ketoacyl synthase, N-terminal domain GNE09_28110 PF16197 Ketoacyl-synthetase C-terminal extension GNE09_28115 PF00665 Integrase core domain GNE09_28115 PF13276 HTH-like domain GNE09_28115 PF13333 Integrase core domain GNE09_28150 PF13193 AMP-binding enzyme C-terminal domain GNE09_28150 PF00501 AMP-binding enzyme GNE09_28150 PF00668 Condensation domain GNE09_28150 PF00550 Phosphopantetheine attachment site GNE09_28150 PF00975 Thioesterase domain GNE09_28155 PF00248 Aldo/keto reductase family GNE09_28180 PF08666 SAF domain GNE09_28180 PF03102 NeuB family GNE09_28190 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase GNE09_28215 PF07690 Major Facilitator Superfamily GNE09_28235 PF01381 Helix-turn-helix GNE09_28240 PF02463 RecF/RecN/SMC N terminal domain GNE09_28245 PF00580 UvrD/REP helicase N-terminal domain GNE09_28245 PF13361 UvrD-like helicase C-terminal domain GNE09_28310 PF00145 C-5 cytosine-specific DNA methylase GNE09_28330 PF13176 Tetratricopeptide repeat GNE09_28330 PF18801 response regulator aspartate phosphatase H, N terminal GNE09_28345 PF02824 TGS domain GNE09_28345 PF04607 Region found in RelA / SpoT proteins GNE09_28345 PF13291 ACT domain GNE09_28355 PF00216 Bacterial DNA-binding protein GNE09_28360 PF13333 Integrase core domain GNE09_28360 PF00665 Integrase core domain GNE09_28360 PF13276 HTH-like domain GNE09_28375 PF18801 response regulator aspartate phosphatase H, N terminal GNE09_28400 PF12389 Camelysin metallo-endopeptidase GNE09_28405 PF05922 Peptidase inhibitor I9 GNE09_28405 PF00082 Subtilase family GNE09_28405 PF02225 PA domain GNE09_28405 PF13860 FlgD Ig-like domain GNE09_28410 PF00072 Response regulator receiver domain GNE09_28410 PF00196 Bacterial regulatory proteins, luxR family GNE09_28415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNE09_28415 PF13492 GAF domain GNE09_28415 PF07730 Histidine kinase GNE09_28430 PF00440 Bacterial regulatory proteins, tetR family GNE09_28435 PF00082 Subtilase family GNE09_28440 PF05147 Lanthionine synthetase C-like protein GNE09_28445 PF00005 ABC transporter GNE09_28450 PF14028 Lantibiotic biosynthesis dehydratase C-term GNE09_28450 PF04738 Lantibiotic dehydratase, N terminus GNE09_28490 PF13537 Glutamine amidotransferase domain GNE09_28490 PF00733 Asparagine synthase GNE09_28495 PF17932 Tetracyclin repressor-like, C-terminal domain GNE09_28495 PF00440 Bacterial regulatory proteins, tetR family GNE09_28510 PF14436 Bacterial EndoU nuclease GNE09_28510 PF04740 LXG domain of WXG superfamily GNE09_28525 PF04740 LXG domain of WXG superfamily GNE09_28525 PF14436 Bacterial EndoU nuclease GNE09_28535 PF12323 Helix-turn-helix domain GNE09_28535 PF07282 Putative transposase DNA-binding domain GNE09_28535 PF01385 Probable transposase GNE09_28545 PF00072 Response regulator receiver domain GNE09_28545 PF00486 Transcriptional regulatory protein, C terminal GNE09_28555 PF13847 Methyltransferase domain GNE09_28555 PF00069 Protein kinase domain GNE09_28585 PF07282 Putative transposase DNA-binding domain GNE09_28585 PF01385 Probable transposase GNE09_28585 PF12323 Helix-turn-helix domain GNE09_28590 PF01510 N-acetylmuramoyl-L-alanine amidase GNE09_28605 PF01471 Putative peptidoglycan binding domain GNE09_28605 PF01510 N-acetylmuramoyl-L-alanine amidase GNE09_28605 PF01476 LysM domain GNE09_28610 PF01551 Peptidase family M23 GNE09_28610 PF04225 Opacity-associated protein A LysM-like domain GNE09_28645 PF00413 Matrixin GNE09_28680 PF06414 Zeta toxin GNE09_28685 PF10145 Phage-related minor tail protein GNE09_28685 PF01464 Transglycosylase SLT domain GNE09_28685 PF01551 Peptidase family M23 GNE09_28695 PF03990 G5-linked-Ubiquitin-like domain GNE09_28695 PF07501 G5 domain GNE09_28695 PF06725 3D domain GNE09_28700 PF01022 Bacterial regulatory protein, arsR family GNE09_28705 PF18801 response regulator aspartate phosphatase H, N terminal GNE09_28720 PF00269 Small, acid-soluble spore proteins, alpha/beta type GNE09_28725 PF00672 HAMP domain GNE09_28725 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GNE09_28750 PF07282 Putative transposase DNA-binding domain GNE09_28750 PF01385 Probable transposase GNE09_28750 PF12323 Helix-turn-helix domain GNE09_28785 PF00005 ABC transporter GNE09_28830 PF01348 Type II intron maturase GNE09_28830 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) GNE09_28985 PF01385 Probable transposase GNE09_28985 PF12323 Helix-turn-helix domain GNE09_28985 PF07282 Putative transposase DNA-binding domain GNE09_29035 PF10087 Uncharacterized protein conserved in bacteria (DUF2325) GNE09_29070 PF07690 Major Facilitator Superfamily GNE09_29085 PF07827 KNTase C-terminal domain GNE09_29145 PF02899 Phage integrase, N-terminal SAM-like domain GNE09_29145 PF00589 Phage integrase family GNE09_29175 PF09335 SNARE associated Golgi protein GNE09_29205 PF09313 Domain of unknown function (DUF1971) GNE09_29205 PF03848 Tellurite resistance protein TehB GNE09_29245 PF00072 Response regulator receiver domain GNE09_29245 PF00486 Transcriptional regulatory protein, C terminal GNE09_29280 PF00665 Integrase core domain GNE09_29280 PF13333 Integrase core domain GNE09_29295 PF13333 Integrase core domain GNE09_29295 PF00665 Integrase core domain GNE09_29295 PF13276 HTH-like domain GNE09_29305 PF00486 Transcriptional regulatory protein, C terminal GNE09_29305 PF00072 Response regulator receiver domain GNE09_29310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNE09_29315 PF00005 ABC transporter GNE09_29320 PF02687 FtsX-like permease family GNE09_29355 PF05147 Lanthionine synthetase C-like protein GNE09_29355 PF13575 Domain of unknown function (DUF4135) GNE09_29400 PF03323 Bacillus/Clostridium GerA spore germination protein GNE09_29405 PF03466 LysR substrate binding domain GNE09_29405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GNE09_29410 PF04294 VanW like protein GNE09_29415 PF00144 Beta-lactamase GNE09_29440 PF13411 MerR HTH family regulatory protein GNE09_29445 PF13276 HTH-like domain GNE09_29445 PF13333 Integrase core domain GNE09_29445 PF00665 Integrase core domain GNE09_29465 PF00106 short chain dehydrogenase GNE09_29470 PF13411 MerR HTH family regulatory protein GNE09_29475 PF13495 Phage integrase, N-terminal SAM-like domain GNE09_29475 PF00589 Phage integrase family GNE09_29500 PF03496 ADP-ribosyltransferase exoenzyme GNE09_29560 PF01048 Phosphorylase superfamily GNE09_29565 PF08240 Alcohol dehydrogenase GroES-like domain GNE09_29565 PF00107 Zinc-binding dehydrogenase GNE09_29570 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GNE09_29570 PF00205 Thiamine pyrophosphate enzyme, central domain GNE09_29570 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GNE09_29575 PF00891 O-methyltransferase domain GNE09_29590 PF04914 DltD protein GNE09_29595 PF00550 Phosphopantetheine attachment site GNE09_29600 PF03062 MBOAT, membrane-bound O-acyltransferase family GNE09_29605 PF13193 AMP-binding enzyme C-terminal domain GNE09_29605 PF00501 AMP-binding enzyme GNE09_29615 PF01522 Polysaccharide deacetylase GNE09_29630 PF08280 M protein trans-acting positive regulator (MGA) HTH domain GNE09_29630 PF05043 Mga helix-turn-helix domain GNE09_29630 PF00874 PRD domain GNE09_29645 PF05791 Bacillus haemolytic enterotoxin (HBL) GNE09_29670 PF08280 M protein trans-acting positive regulator (MGA) HTH domain GNE09_29670 PF05043 Mga helix-turn-helix domain GNE09_29670 PF00874 PRD domain GNE09_29685 PF01022 Bacterial regulatory protein, arsR family GNE09_29705 PF18801 response regulator aspartate phosphatase H, N terminal GNE09_29715 PF18801 response regulator aspartate phosphatase H, N terminal GNE09_29715 PF13176 Tetratricopeptide repeat GNE09_29720 PF17209 Hfq protein GNE09_29725 PF01022 Bacterial regulatory protein, arsR family GNE09_29730 PF02600 Disulfide bond formation protein DsbB GNE09_29745 PF00565 Staphylococcal nuclease homologue GNE09_29750 PF01751 Toprim domain GNE09_29750 PF13342 C-terminal repeat of topoisomerase GNE09_29750 PF01131 DNA topoisomerase GNE09_29790 PF08378 Nuclease-related domain GNE09_29830 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) GNE09_29870 PF09827 CRISPR associated protein Cas2 GNE09_29905 PF09704 CRISPR-associated protein (Cas_Cas5) GNE09_29935 PF05163 DinB family GNE09_30015 PF03992 Antibiotic biosynthesis monooxygenase GNE09_30025 PF09397 Ftsk gamma domain GNE09_30025 PF17854 FtsK alpha domain GNE09_30025 PF13491 4TM region of DNA translocase FtsK/SpoIIIE GNE09_30025 PF01580 FtsK/SpoIIIE family GNE09_30030 PF01348 Type II intron maturase GNE09_30030 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) GNE09_30215 PF07282 Putative transposase DNA-binding domain GNE09_30215 PF01385 Probable transposase GNE09_30215 PF12323 Helix-turn-helix domain