locus-tag	class	description
GNE09_00030	COG1063	alcohol dehydrogenase
GNE09_00055	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
GNE09_00060	COG1879	ABC-type sugar transport system periplasmic component
GNE09_00065	COG1172	Belongs to the binding-protein-dependent transport system permease family
GNE09_00080	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
GNE09_00085	COG1609	Transcriptional regulator
GNE09_00090	COG0477	Major facilitator Superfamily
GNE09_00095	COG1846	Transcriptional regulator
GNE09_00100	COG2271	Major facilitator Superfamily
GNE09_00115	COG0659	secondary active sulfate transmembrane transporter activity
GNE09_00130	COG5002	protein histidine kinase activity
GNE09_00135	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
GNE09_00160	COG1116	anion transmembrane transporter activity
GNE09_00195	COG0833	amino acid
GNE09_00200	COG0765	amino acid transport
GNE09_00205	COG0765	amino acid transport
GNE09_00210	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
GNE09_00215	COG1126	abc transporter atp-binding protein
GNE09_00220	COG1115	amino acid carrier protein
GNE09_00225	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
GNE09_00230	COG0697	spore germination
GNE09_00245	COG0366	Alpha amylase catalytic
GNE09_00250	COG1263	PTS System
GNE09_00250	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
GNE09_00255	COG2188	Transcriptional regulator
GNE09_00260	COG0531	amino acid
GNE09_00280	COG0714	Associated with various cellular activities
GNE09_00295	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
GNE09_00300	COG0156	8-amino-7-oxononanoate synthase activity
GNE09_00315	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
GNE09_00320	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
GNE09_00325	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
GNE09_00330	COG3104	oligopeptide transport
GNE09_00345	COG1620	l-lactate permease
GNE09_00350	COG1027	Aspartate ammonia-lyase
GNE09_00355	COG1253	flavin adenine dinucleotide binding
GNE09_00360	COG0346	lactoylglutathione lyase activity
GNE09_00365	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
GNE09_00370	COG1316	TRANSCRIPTIONal
GNE09_00375	COG2720	vancomycin resistance protein
GNE09_00395	COG3227	Zinc metalloprotease (Elastase)
GNE09_00410	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
GNE09_00415	COG2217	Heavy metal translocating P-type atpase
GNE09_00420	COG0640	Transcriptional regulator
GNE09_00425	COG0531	amino acid
GNE09_00440	COG2427	Protein of unknown function (DUF1641)
GNE09_00445	COG3383	formate dehydrogenase (NAD+) activity
GNE09_00450	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
GNE09_00470	COG5002	protein histidine kinase activity
GNE09_00480	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
GNE09_00495	COG0281	malic enzyme
GNE09_00500	COG3493	citrate carrier protein
GNE09_00505	COG4565	transcriptional regulatory protein
GNE09_00510	COG3290	protein histidine kinase activity
GNE09_00520	COG4990	cell redox homeostasis
GNE09_00530	COG5002	protein histidine kinase activity
GNE09_00535	COG0745	RESPONSE REGULATOR receiver
GNE09_00540	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
GNE09_00550	COG0395	ABC-type sugar transport system, permease component
GNE09_00555	COG1175	transmembrane transport
GNE09_00560	COG3842	ATPase activity
GNE09_00565	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
GNE09_00620	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
GNE09_00625	COG0697	spore germination
GNE09_00630	COG3104	oligopeptide transport
GNE09_00640	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
GNE09_00645	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
GNE09_00660	COG4974	Belongs to the 'phage' integrase family
GNE09_00680	COG2851	Citrate transporter
GNE09_00685	COG4565	transcriptional regulatory protein
GNE09_00690	COG3290	protein histidine kinase activity
GNE09_00700	COG2268	Band 7 protein
GNE09_00705	COG1585	Membrane protein implicated in regulation of membrane protease activity
GNE09_00715	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
GNE09_00730	COG2766	serine protein kinase
GNE09_00740	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
GNE09_00765	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
GNE09_00885	COG0735	belongs to the Fur family
GNE09_00890	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
GNE09_00910	COG4555	ABC transporter
GNE09_00920	COG0067	glutamate synthase
GNE09_00920	COG0069	glutamate synthase activity
GNE09_00920	COG0070	glutamate synthase
GNE09_00925	COG4129	membrane
GNE09_00930	COG1132	(ABC) transporter
GNE09_00955	COG1194	a g-specific adenine glycosylase
GNE09_00960	COG1988	membrane-bound metal-dependent
GNE09_00990	COG1090	epimerase
GNE09_00995	COG1228	amidohydrolase
GNE09_01015	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
GNE09_01030	COG0463	Glycosyl transferase, family 2
GNE09_01035	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
GNE09_01035	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
GNE09_01045	COG1216	Glycosyl transferase, family 2
GNE09_01060	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
GNE09_01065	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
GNE09_01065	COG1263	PTS System
GNE09_01070	COG2066	Belongs to the glutaminase family
GNE09_01090	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
GNE09_01095	COG0833	amino acid
GNE09_01105	COG3829	transcription factor binding
GNE09_01125	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
GNE09_01130	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
GNE09_01150	COG0535	radical SAM domain protein
GNE09_01160	COG0387	Pfam Sodium calcium exchanger
GNE09_01165	COG3871	stress protein (general stress protein 26)
GNE09_01180	COG0586	Pfam SNARE associated Golgi protein
GNE09_01200	COG0697	spore germination
GNE09_01205	COG2217	Heavy metal translocating P-type atpase
GNE09_01210	COG1295	ribonuclease BN
GNE09_01220	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
GNE09_01235	COG3853	Toxic anion resistance protein (TelA)
GNE09_01245	COG0861	Integral membrane protein TerC family
GNE09_01250	COG2310	stress, protein
GNE09_01255	COG2310	stress, protein
GNE09_01260	COG2310	stress, protein
GNE09_01290	COG2270	Major facilitator Superfamily
GNE09_01335	COG0488	(ABC) transporter
GNE09_01340	COG1116	anion transmembrane transporter activity
GNE09_01345	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
GNE09_01350	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
GNE09_01370	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
GNE09_01400	COG2190	(PTS) system
GNE09_01400	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
GNE09_01400	COG1263	PTS System
GNE09_01405	COG0366	Alpha amylase catalytic
GNE09_01410	COG0277	FAD linked oxidase domain protein
GNE09_01420	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
GNE09_01425	COG0549	Belongs to the carbamate kinase family
GNE09_01450	COG0840	transmembrane signaling receptor activity
GNE09_01455	COG1126	abc transporter atp-binding protein
GNE09_01460	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
GNE09_01465	COG0765	amino acid transport
GNE09_01475	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
GNE09_01475	COG0723	plastoquinol--plastocyanin reductase activity
GNE09_01480	COG2814	Major facilitator Superfamily
GNE09_01485	COG3541	Predicted nucleotidyltransferase
GNE09_01505	COG5002	protein histidine kinase activity
GNE09_01530	COG0166	Belongs to the GPI family
GNE09_01545	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
GNE09_01550	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
GNE09_01555	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
GNE09_01560	COG0235	Class ii aldolase
GNE09_01570	COG4857	Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate
GNE09_01575	COG0450	alkyl hydroperoxide reductase
GNE09_01590	COG1473	amidohydrolase
GNE09_01620	COG4807	Protein conserved in bacteria
GNE09_01625	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
GNE09_01635	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
GNE09_01650	COG2309	aminopeptidase activity
GNE09_01660	COG2076	Multidrug Resistance protein
GNE09_01665	COG1012	belongs to the aldehyde dehydrogenase family
GNE09_01675	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
GNE09_01685	COG1597	lipid kinase activity
GNE09_01705	COG4682	membrane
GNE09_01710	COG1846	Transcriptional regulator
GNE09_01715	COG0003	Pfam Anion-transporting ATPase
GNE09_01730	COG1464	Belongs to the NlpA lipoprotein family
GNE09_01735	COG2011	ABC-type metal ion transport system permease component
GNE09_01745	COG1335	isochorismatase
GNE09_01760	COG4851	CamS sex pheromone cAM373 precursor
GNE09_01770	COG0210	DNA helicase
GNE09_01795	COG0151	Belongs to the GarS family
GNE09_01805	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
GNE09_01815	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
GNE09_01830	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
GNE09_01840	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
GNE09_01845	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
GNE09_01850	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
GNE09_01870	COG0745	RESPONSE REGULATOR receiver
GNE09_01875	COG2205	protein histidine kinase activity
GNE09_01920	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
GNE09_01940	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
GNE09_01975	COG2252	PERMEase
GNE09_01995	COG1266	CAAX protease self-immunity
GNE09_02010	COG0488	(ABC) transporter
GNE09_02020	COG0456	acetyltransferase
GNE09_02025	COG1214	PFAM Peptidase M22, glycoprotease
GNE09_02030	COG0802	atpase or kinase
GNE09_02130	COG2183	response to ionizing radiation
GNE09_02135	COG2337	Toxic component of a toxin-antitoxin (TA) module
GNE09_02140	COG0864	Transcriptional regulator
GNE09_02145	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
GNE09_02150	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
GNE09_02160	COG0705	Rhomboid family
GNE09_02165	COG4294	response to UV
GNE09_02175	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
GNE09_02185	COG2814	Major facilitator Superfamily
GNE09_02190	COG0531	amino acid
GNE09_02200	COG0179	Fumarylacetoacetate (FAA) hydrolase
GNE09_02205	COG3185	4-Hydroxyphenylpyruvate dioxygenase
GNE09_02235	COG0561	phosphatase activity
GNE09_02240	COG4608	Belongs to the ABC transporter superfamily
GNE09_02245	COG0444	Belongs to the ABC transporter superfamily
GNE09_02255	COG0601	transmembrane transport
GNE09_02260	COG0747	negative chemotaxis
GNE09_02270	COG0488	(ABC) transporter
GNE09_02290	COG5298	Protein conserved in bacteria
GNE09_02305	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
GNE09_02315	COG1609	Transcriptional regulator
GNE09_02340	COG0697	spore germination
GNE09_02355	COG1910	domain protein
GNE09_02360	COG0725	ABC transporter, periplasmic molybdate-binding protein
GNE09_02365	COG4149	molybdate abc transporter
GNE09_02380	COG0656	L-ascorbic acid biosynthetic process
GNE09_02385	COG4166	transmembrane transport
GNE09_02390	COG4166	transmembrane transport
GNE09_02405	COG4166	transmembrane transport
GNE09_02410	COG4608	Belongs to the ABC transporter superfamily
GNE09_02415	COG0444	Belongs to the ABC transporter superfamily
GNE09_02420	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
GNE09_02425	COG0601	transmembrane transport
GNE09_02445	COG2814	Major facilitator Superfamily
GNE09_02455	COG2271	Major facilitator Superfamily
GNE09_02460	COG0277	FAD linked oxidase domain protein
GNE09_02475	COG1464	Belongs to the NlpA lipoprotein family
GNE09_02480	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
GNE09_02485	COG2011	ABC-type metal ion transport system permease component
GNE09_02490	COG1028	Short-chain dehydrogenase reductase Sdr
GNE09_02525	COG4856	YbbR-like protein
GNE09_02530	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
GNE09_02610	COG0726	polysaccharide deacetylase
GNE09_02615	COG2194	sulfuric ester hydrolase activity
GNE09_02625	COG0489	protein tyrosine kinase activity
GNE09_02630	COG0860	N-Acetylmuramoyl-L-alanine amidase
GNE09_02655	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
GNE09_02690	COG0257	Belongs to the bacterial ribosomal protein bL36 family
GNE09_02700	COG0024	Methionine aminopeptidase
GNE09_02710	COG0201	protein transport
GNE09_02735	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
GNE09_02840	COG1358	cellular component organization or biogenesis
GNE09_02855	COG2813	Specifically methylates the guanine in position
GNE09_02880	COG0250	Participates in transcription elongation, termination and antitermination
GNE09_02885	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
GNE09_02890	COG0267	Belongs to the bacterial ribosomal protein bL33 family
GNE09_02900	COG3688	RNA-binding protein containing a PIN domain
GNE09_02905	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
GNE09_02920	COG1045	serine acetyltransferase
GNE09_02940	COG4956	integral membrane protein (PIN domain superfamily)
GNE09_02950	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
GNE09_02965	COG3880	PFAM UvrB UvrC protein
GNE09_03055	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
GNE09_03060	COG1396	sequence-specific DNA binding
GNE09_03065	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
GNE09_03070	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
GNE09_03075	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
GNE09_03080	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
GNE09_03085	COG0512	Glutamine amidotransferase of anthranilate synthase
GNE09_03090	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
GNE09_03095	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
GNE09_03110	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
GNE09_03125	COG2208	phosphoserine phosphatase activity
GNE09_03140	COG1098	S1 RNA binding domain
GNE09_03160	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
GNE09_03165	COG3956	TIGRFAM MazG family protein
GNE09_03170	COG2244	polysaccharide biosynthetic process
GNE09_03175	COG2002	toxin-antitoxin pair type II binding
GNE09_03180	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
GNE09_03195	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
GNE09_03210	COG0251	oxidation-reduction process
GNE09_03215	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
GNE09_03230	COG4466	Protein conserved in bacteria
GNE09_03250	COG0084	hydrolase, TatD family'
GNE09_03265	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
GNE09_03275	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
GNE09_03285	COG1774	PSP1 C-terminal conserved region
GNE09_03290	COG0470	DNA polymerase III
GNE09_03300	COG1982	Orn Lys Arg decarboxylase major
GNE09_03355	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
GNE09_03365	COG0590	tRNA wobble adenosine to inosine editing
GNE09_03370	COG1335	isochorismatase
GNE09_03375	COG1428	Deoxynucleoside kinase
GNE09_03380	COG1428	Deoxynucleoside kinase
GNE09_03410	COG1686	Belongs to the peptidase S11 family
GNE09_03415	COG0516	GMP reductase activity
GNE09_03415	COG0517	IMP dehydrogenase activity
GNE09_03450	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
GNE09_03455	COG0187	DNA topoisomerase II activity
GNE09_03465	COG2501	S4 domain
GNE09_03495	COG1847	R3H domain protein
GNE09_03520	COG1192	Involved in chromosome partitioning
GNE09_03525	COG1475	DNA binding
GNE09_03535	COG0668	transmembrane transport
GNE09_03540	COG4481	Protein conserved in bacteria
GNE09_03545	COG0012	GTP binding
GNE09_03565	COG4241	membrane
GNE09_03570	COG3887	signaling protein consisting of a modified GGDEF domain and a DHH domain
GNE09_03580	COG0305	Participates in initiation and elongation during chromosome replication
GNE09_03610	COG0745	RESPONSE REGULATOR receiver
GNE09_03615	COG5002	protein histidine kinase activity
GNE09_03625	COG4853	Protein conserved in bacteria
GNE09_03630	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
GNE09_03635	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
GNE09_03650	COG5002	protein histidine kinase activity
GNE09_03665	COG1164	Oligoendopeptidase f
GNE09_03685	COG1272	protein, Hemolysin III
GNE09_03690	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
GNE09_03715	COG4362	Belongs to the NOS family. Bacterial NOS oxygenase subfamily
GNE09_03720	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
GNE09_03725	COG2814	Major facilitator Superfamily
GNE09_03730	COG3275	phosphorelay sensor kinase activity
GNE09_03750	COG0628	permease
GNE09_03755	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
GNE09_03755	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
GNE09_03760	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
GNE09_03765	COG1309	transcriptional regulator
GNE09_03770	COG0488	(ABC) transporter
GNE09_03775	COG1309	transcriptional regulator
GNE09_03785	COG0463	Glycosyl transferase, family 2
GNE09_03800	COG1216	Glycosyl transferase, family 2
GNE09_03815	COG1216	Glycosyl transferase, family 2
GNE09_03820	COG1607	acyl-coa hydrolase
GNE09_03830	COG0840	transmembrane signaling receptor activity
GNE09_03845	COG0438	transferase activity, transferring glycosyl groups
GNE09_03855	COG0477	Major facilitator Superfamily
GNE09_03860	COG3279	Response regulator of the LytR AlgR family
GNE09_03865	COG1966	Carbon starvation protein
GNE09_03870	COG2879	small protein
GNE09_03875	COG3706	GGDEF domain
GNE09_03880	COG0351	phosphomethylpyrimidine kinase
GNE09_03885	COG4585	Histidine kinase
GNE09_03885	COG2203	Gaf domain
GNE09_03890	COG2197	response regulator
GNE09_03900	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
GNE09_03905	COG1011	Hydrolase
GNE09_03920	COG0460	homoserine dehydrogenase
GNE09_03930	COG1609	Transcriptional regulator
GNE09_03935	COG2755	lipolytic protein G-D-S-L family
GNE09_03940	COG1131	(ABC) transporter
GNE09_03945	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
GNE09_03955	COG2814	Major facilitator Superfamily
GNE09_03960	COG0561	phosphatase activity
GNE09_03965	COG2233	PERMEase
GNE09_03970	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
GNE09_03980	COG2363	Small membrane protein
GNE09_03990	COG3773	Cell wall hydrolase
GNE09_04005	COG0280	phosphate acetyltransferase
GNE09_04025	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
GNE09_04030	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
GNE09_04035	COG1120	ATPase activity
GNE09_04040	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
GNE09_04045	COG1078	dGTPase activity
GNE09_04055	COG1994	Peptidase M50
GNE09_04065	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
GNE09_04070	COG0584	glycerophosphoryl diester phosphodiesterase
GNE09_04075	COG0789	Transcriptional regulator
GNE09_04080	COG2814	Major facilitator Superfamily
GNE09_04085	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
GNE09_04105	COG1619	proteins homologs of microcin C7 resistance protein MccF
GNE09_04110	COG4506	Protein conserved in bacteria
GNE09_04120	COG1595	DNA-templated transcription, initiation
GNE09_04140	COG2234	aminopeptidase activity
GNE09_04150	COG0024	Methionine aminopeptidase
GNE09_04155	COG1131	(ABC) transporter
GNE09_04160	COG0842	Transport permease protein
GNE09_04165	COG4585	Histidine kinase
GNE09_04170	COG2197	response regulator
GNE09_04175	COG3227	Zinc metalloprotease (Elastase)
GNE09_04190	COG5001	Diguanylate cyclase
GNE09_04190	COG3300	MHYT domain
GNE09_04200	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
GNE09_04205	COG2181	nitrate reductase activity
GNE09_04205	COG0247	lactate metabolic process
GNE09_04210	COG0183	Belongs to the thiolase family
GNE09_04215	COG1250	3-hydroxyacyl-CoA dehydrogenase
GNE09_04220	COG1960	acyl-CoA dehydrogenase activity
GNE09_04225	COG1960	acyl-CoA dehydrogenase activity
GNE09_04245	COG4821	SIS domain
GNE09_04265	COG1494	fructose-1,6-bisphosphatase
GNE09_04270	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
GNE09_04285	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
GNE09_04305	COG0009	L-threonylcarbamoyladenylate synthase
GNE09_04320	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
GNE09_04325	COG2259	Doxx family
GNE09_04330	COG2190	(PTS) system
GNE09_04340	COG0698	ribose 5-phosphate isomerase
GNE09_04375	COG0356	it plays a direct role in the translocation of protons across the membrane
GNE09_04425	COG5001	Diguanylate cyclase
GNE09_04425	COG3300	MHYT domain
GNE09_04440	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
GNE09_04460	COG0839	Belongs to the complex I subunit 6 family
GNE09_04470	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
GNE09_04475	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
GNE09_04480	COG1007	ATP synthesis coupled electron transport
GNE09_04485	COG4836	Membrane
GNE09_04495	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
GNE09_04500	COG2385	sporulation resulting in formation of a cellular spore
GNE09_04505	COG3279	Response regulator of the LytR AlgR family
GNE09_04520	COG0739	heme binding
GNE09_04530	COG1609	Transcriptional regulator
GNE09_04545	COG0489	protein tyrosine kinase activity
GNE09_04550	COG3944	biosynthesis protein
GNE09_04555	COG0489	protein tyrosine kinase activity
GNE09_04560	COG4464	protein tyrosine phosphatase activity
GNE09_04565	COG1210	Utp--glucose-1-phosphate uridylyltransferase
GNE09_04570	COG1086	Polysaccharide biosynthesis protein
GNE09_04575	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
GNE09_04580	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
GNE09_04585	COG1045	serine acetyltransferase
GNE09_04595	COG1086	Polysaccharide biosynthesis protein
GNE09_04610	COG0438	transferase activity, transferring glycosyl groups
GNE09_04625	COG0438	transferase activity, transferring glycosyl groups
GNE09_04655	COG0745	RESPONSE REGULATOR receiver
GNE09_04660	COG5002	protein histidine kinase activity
GNE09_04695	COG1136	(ABC) transporter
GNE09_04700	COG0577	efflux transmembrane transporter activity
GNE09_04710	COG1191	sigma factor activity
GNE09_04740	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
GNE09_04745	COG4715	Zinc finger, swim domain protein
GNE09_04770	COG3584	3D domain protein
GNE09_04770	COG1388	LysM domain
GNE09_04775	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
GNE09_04780	COG1215	transferase activity, transferring glycosyl groups
GNE09_04790	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
GNE09_04795	COG1388	LysM domain
GNE09_04795	COG0791	NLP P60 protein
GNE09_04805	COG1368	sulfuric ester hydrolase activity
GNE09_04815	COG2389	metal-binding protein
GNE09_04835	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
GNE09_04840	COG1294	oxidase, subunit
GNE09_04845	COG1271	oxidase subunit
GNE09_04855	COG0583	DNA-binding transcription factor activity
GNE09_04860	COG1511	domain protein
GNE09_04875	COG1301	dicarboxylic acid transport
GNE09_04880	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
GNE09_04890	COG1447	Phosphotransferase system cellobiose-specific component IIA
GNE09_04900	COG4262	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
GNE09_04910	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
GNE09_04915	COG1447	Phosphotransferase system cellobiose-specific component IIA
GNE09_04920	COG1486	melibiose metabolic process
GNE09_04940	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
GNE09_04940	COG3933	PFAM sigma-54 factor interaction domain-containing protein
GNE09_04950	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
GNE09_04960	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
GNE09_04970	COG1739	Uncharacterized protein family UPF0029
GNE09_04975	COG1307	EDD domain protein, DegV family
GNE09_04980	COG1733	regulation of RNA biosynthetic process
GNE09_04985	COG0791	NLP P60 protein
GNE09_04985	COG1388	LysM domain
GNE09_04990	COG4098	Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
GNE09_04995	COG1040	competence protein
GNE09_05000	COG1278	Cold shock
GNE09_05005	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
GNE09_05035	COG1131	(ABC) transporter
GNE09_05060	COG2884	Cell division ATP-binding protein ftsE
GNE09_05065	COG2177	Part of the ABC transporter FtsEX involved in
GNE09_05070	COG3409	Peptidoglycan-binding domain 1 protein
GNE09_05070	COG0793	Belongs to the peptidase S41A family
GNE09_05075	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
GNE09_05080	COG1132	(ABC) transporter
GNE09_05095	COG0655	NAD(P)H dehydrogenase (quinone) activity
GNE09_05105	COG0583	DNA-binding transcription factor activity
GNE09_05140	COG0789	Transcriptional regulator
GNE09_05155	COG0556	nucleotide-excision repair
GNE09_05160	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
GNE09_05170	COG1950	PFAM Membrane protein of
GNE09_05190	COG0110	maltose O-acetyltransferase activity
GNE09_05195	COG0457	Tetratricopeptide repeat
GNE09_05200	COG0492	ferredoxin-NADP+ reductase activity
GNE09_05210	COG1051	belongs to the nudix hydrolase family
GNE09_05220	COG0391	Required for morphogenesis under gluconeogenic growth conditions
GNE09_05230	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
GNE09_05240	COG2323	membrane
GNE09_05255	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
GNE09_05280	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
GNE09_05295	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
GNE09_05330	COG1346	cytolysis
GNE09_05335	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
GNE09_05340	COG1647	Serine aminopeptidase, S33
GNE09_05345	COG0557	exoribonuclease II activity
GNE09_05400	COG1513	Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide
GNE09_05405	COG0288	reversible hydration of carbon dioxide
GNE09_05410	COG1522	sequence-specific DNA binding
GNE09_05420	COG1522	sequence-specific DNA binding
GNE09_05425	COG1335	isochorismatase
GNE09_05435	COG3223	Belongs to the PsiE family
GNE09_05445	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
GNE09_05450	COG0488	(ABC) transporter
GNE09_05485	COG0840	transmembrane signaling receptor activity
GNE09_05485	COG3290	protein histidine kinase activity
GNE09_05505	COG1252	NADH dehydrogenase
GNE09_05515	COG1733	regulation of RNA biosynthetic process
GNE09_05520	COG2814	Major facilitator Superfamily
GNE09_05525	COG0656	L-ascorbic acid biosynthetic process
GNE09_05540	COG2910	NAD(P)H-binding
GNE09_05545	COG1115	amino acid carrier protein
GNE09_05550	COG1115	amino acid carrier protein
GNE09_05555	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
GNE09_05560	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
GNE09_05565	COG2311	Membrane
GNE09_05580	COG1611	Belongs to the LOG family
GNE09_05595	COG0783	Belongs to the Dps family
GNE09_05600	COG1115	amino acid carrier protein
GNE09_05605	COG0490	domain, Protein
GNE09_05610	COG0475	glutathione-regulated potassium exporter activity
GNE09_05615	COG0586	Pfam SNARE associated Golgi protein
GNE09_05635	COG3227	Zinc metalloprotease (Elastase)
GNE09_05640	COG2151	metal-sulfur cluster biosynthetic enzyme
GNE09_05645	COG0840	transmembrane signaling receptor activity
GNE09_05675	COG5002	protein histidine kinase activity
GNE09_05680	COG0745	RESPONSE REGULATOR receiver
GNE09_05685	COG1376	ErfK ybiS ycfS ynhG family protein
GNE09_05730	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
GNE09_05755	COG0531	amino acid
GNE09_05760	COG2814	Major facilitator Superfamily
GNE09_05775	COG0840	transmembrane signaling receptor activity
GNE09_05780	COG0011	TIGRFAM Protein of
GNE09_05795	COG1686	Belongs to the peptidase S11 family
GNE09_05805	COG1024	Enoyl-CoA hydratase
GNE09_05805	COG1250	3-hydroxyacyl-CoA dehydrogenase
GNE09_05810	COG0183	Belongs to the thiolase family
GNE09_05815	COG1960	acyl-CoA dehydrogenase activity
GNE09_05820	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
GNE09_05835	COG0039	L-malate dehydrogenase activity
GNE09_05855	COG1393	Belongs to the ArsC family
GNE09_05865	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
GNE09_05870	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
GNE09_05885	COG2011	ABC-type metal ion transport system permease component
GNE09_05890	COG1464	Belongs to the NlpA lipoprotein family
GNE09_05895	COG1464	Belongs to the NlpA lipoprotein family
GNE09_05900	COG0396	ATPase activity
GNE09_05905	COG0719	Fe-S assembly protein
GNE09_05910	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
GNE09_05915	COG0822	iron-sulfur transferase activity
GNE09_05920	COG0719	Fe-S assembly protein
GNE09_05925	COG0737	Belongs to the 5'-nucleotidase family
GNE09_05930	COG3377	Domain of unknown function (DUF1805)
GNE09_05940	COG0739	heme binding
GNE09_05965	COG4377	Putative membrane peptidase family (DUF2324)
GNE09_05970	COG0789	Transcriptional regulator
GNE09_05980	COG4470	Protein conserved in bacteria
GNE09_05995	COG1494	fructose-1,6-bisphosphatase
GNE09_06000	COG2445	Protein of unknown function DUF86
GNE09_06015	COG2249	NAD(P)H dehydrogenase (quinone) activity
GNE09_06025	COG1358	cellular component organization or biogenesis
GNE09_06045	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
GNE09_06050	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
GNE09_06060	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
GNE09_06065	COG4837	Protein of unknown function (DUF1462)
GNE09_06085	COG2824	Alkylphosphonate utilization operon protein PhnA
GNE09_06090	COG0390	transport system, permease component
GNE09_06095	COG2274	protein secretion by the type I secretion system
GNE09_06105	COG1252	NADH dehydrogenase
GNE09_06120	COG0316	Belongs to the HesB IscA family
GNE09_06150	COG1683	Conserved Protein
GNE09_06165	COG3708	Transcriptional regulator
GNE09_06175	COG1252	NADH dehydrogenase
GNE09_06190	COG3584	3D domain protein
GNE09_06205	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
GNE09_06210	COG1210	Utp--glucose-1-phosphate uridylyltransferase
GNE09_06215	COG1268	BioY protein
GNE09_06225	COG2050	protein possibly involved in aromatic compounds catabolism
GNE09_06230	COG0423	glycine-tRNA ligase activity
GNE09_06245	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
GNE09_06250	COG5018	Exonuclease
GNE09_06265	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
GNE09_06275	COG2267	carboxylic ester hydrolase activity
GNE09_06280	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
GNE09_06285	COG1522	sequence-specific DNA binding
GNE09_06290	COG0436	Aminotransferase
GNE09_06295	COG1098	S1 RNA binding domain
GNE09_06300	COG2155	Conserved Protein
GNE09_06315	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
GNE09_06320	COG1285	pathogenesis
GNE09_06455	COG1309	transcriptional regulator
GNE09_06460	COG0039	L-malate dehydrogenase activity
GNE09_06485	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
GNE09_06495	COG0058	SHG alpha-glucan phosphorylase activity
GNE09_06515	COG1278	Cold shock
GNE09_06520	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
GNE09_06525	COG1575	Belongs to the MenA family. Type 1 subfamily
GNE09_06530	COG1169	isochorismate synthase
GNE09_06540	COG0596	Alpha beta hydrolase
GNE09_06545	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
GNE09_06555	COG4948	Mandelate Racemase Muconate Lactonizing
GNE09_06575	COG0758	DNA mediated transformation
GNE09_06575	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
GNE09_06585	COG3964	amidohydrolase
GNE09_06620	COG0577	efflux transmembrane transporter activity
GNE09_06625	COG1136	(ABC) transporter
GNE09_06630	COG0577	efflux transmembrane transporter activity
GNE09_06635	COG0577	efflux transmembrane transporter activity
GNE09_06640	COG2205	protein histidine kinase activity
GNE09_06645	COG0745	RESPONSE REGULATOR receiver
GNE09_06655	COG0640	Transcriptional regulator
GNE09_06660	COG5658	integral membrane protein
GNE09_06665	COG1131	(ABC) transporter
GNE09_06675	COG2207	Transcriptional regulator
GNE09_06675	COG3708	Transcriptional regulator
GNE09_06680	COG1136	(ABC) transporter
GNE09_06685	COG0577	efflux transmembrane transporter activity
GNE09_06695	COG0586	Pfam SNARE associated Golgi protein
GNE09_06705	COG5002	protein histidine kinase activity
GNE09_06755	COG1597	lipid kinase activity
GNE09_06785	COG0745	RESPONSE REGULATOR receiver
GNE09_06790	COG5002	protein histidine kinase activity
GNE09_06795	COG3859	Proton-coupled thiamine transporter YuaJ
GNE09_06820	COG1842	Phage shock protein A
GNE09_06845	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
GNE09_06865	COG1294	oxidase, subunit
GNE09_06870	COG1271	oxidase subunit
GNE09_06875	COG0288	reversible hydration of carbon dioxide
GNE09_06890	COG0789	Transcriptional regulator
GNE09_06900	COG2076	Multidrug Resistance protein
GNE09_06930	COG0494	nUDIX hydrolase
GNE09_06955	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
GNE09_06960	COG1116	anion transmembrane transporter activity
GNE09_06965	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
GNE09_06980	COG1368	sulfuric ester hydrolase activity
GNE09_06985	COG2267	carboxylic ester hydrolase activity
GNE09_06995	COG3852	Histidine kinase
GNE09_07000	COG5002	protein histidine kinase activity
GNE09_07090	COG0438	transferase activity, transferring glycosyl groups
GNE09_07095	COG0671	phosphoesterase, PA-phosphatase related
GNE09_07100	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
GNE09_07105	COG2267	carboxylic ester hydrolase activity
GNE09_07120	COG1794	racemase activity, acting on amino acids and derivatives
GNE09_07125	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
GNE09_07130	COG1242	4 iron, 4 sulfur cluster binding
GNE09_07150	COG1136	(ABC) transporter
GNE09_07160	COG0582	viral genome integration into host DNA
GNE09_07165	COG0490	domain, Protein
GNE09_07170	COG0475	glutathione-regulated potassium exporter activity
GNE09_07175	COG2814	Major facilitator Superfamily
GNE09_07215	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
GNE09_07225	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
GNE09_07245	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
GNE09_07250	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
GNE09_07260	COG0303	'Molybdopterin
GNE09_07265	COG1763	Mo-molybdopterin cofactor biosynthetic process
GNE09_07270	COG0314	molybdopterin synthase activity
GNE09_07295	COG1329	Transcriptional regulator
GNE09_07315	COG3832	glyoxalase III activity
GNE09_07330	COG2081	HI0933 family
GNE09_07335	COG2244	polysaccharide biosynthetic process
GNE09_07340	COG1187	pseudouridine synthase activity
GNE09_07345	COG1349	DNA-binding transcription factor activity
GNE09_07350	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
GNE09_07360	COG1523	belongs to the glycosyl hydrolase 13 family
GNE09_07365	COG0510	thiamine kinase activity
GNE09_07380	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
GNE09_07390	COG1363	Peptidase, m42
GNE09_07395	COG1986	Phosphatase that hydrolyzes non-canonical purine nucleotides such as XTP and ITP to their respective diphosphate derivatives. Probably excludes non-canonical purines from DNA precursor pool, thus preventing their incorporation into DNA and avoiding chromosomal lesions
GNE09_07400	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
GNE09_07410	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
GNE09_07425	COG1674	ftsk spoiiie
GNE09_07440	COG0789	Transcriptional regulator
GNE09_07445	COG0697	spore germination
GNE09_07450	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
GNE09_07465	COG2309	aminopeptidase activity
GNE09_07475	COG3118	belongs to the thioredoxin family
GNE09_07480	COG4851	CamS sex pheromone cAM373 precursor
GNE09_07485	COG1605	Chorismate mutase
GNE09_07485	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
GNE09_07500	COG1609	Transcriptional regulator
GNE09_07530	COG0666	response to abiotic stimulus
GNE09_07535	COG5002	protein histidine kinase activity
GNE09_07540	COG0745	RESPONSE REGULATOR receiver
GNE09_07555	COG0123	including yeast histone deacetylase and acetoin utilization protein
GNE09_07560	COG0517	IMP dehydrogenase activity
GNE09_07565	COG0454	-acetyltransferase
GNE09_07570	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
GNE09_07575	COG0110	maltose O-acetyltransferase activity
GNE09_07585	COG1595	DNA-templated transcription, initiation
GNE09_07625	COG0626	cystathionine gamma-synthase activity
GNE09_07630	COG1956	GAF domain-containing protein
GNE09_07635	COG1309	transcriptional regulator
GNE09_07640	COG0697	spore germination
GNE09_07645	COG0583	DNA-binding transcription factor activity
GNE09_07655	COG1104	cysteine desulfurase activity
GNE09_07670	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
GNE09_07680	COG1574	metal-dependent hydrolase with the TIM-barrel fold
GNE09_07695	COG3874	Sporulation protein YtfJ
GNE09_07700	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
GNE09_07705	COG0827	DNA restriction-modification system
GNE09_07730	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
GNE09_07775	COG0589	response to stress
GNE09_07780	COG1028	Short-chain dehydrogenase reductase Sdr
GNE09_07795	COG0662	Cupin 2, conserved barrel domain protein
GNE09_07800	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
GNE09_07835	COG0006	proline dipeptidase activity
GNE09_07850	COG4109	DRTGG domain
GNE09_07865	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
GNE09_07880	COG0587	DNA-directed DNA polymerase activity
GNE09_07885	COG0281	malic enzyme
GNE09_07890	COG1725	Transcriptional regulator
GNE09_07915	COG3030	protein affecting phage T7 exclusion by the F plasmid
GNE09_07920	COG0628	permease
GNE09_07930	COG0372	Belongs to the citrate synthase family
GNE09_07935	COG0538	isocitrate dehydrogenase activity
GNE09_07955	COG0745	RESPONSE REGULATOR receiver
GNE09_07960	COG5002	protein histidine kinase activity
GNE09_07965	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
GNE09_07965	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
GNE09_07980	COG0237	dephospho-CoA kinase activity
GNE09_07985	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
GNE09_07990	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
GNE09_08000	COG3611	Membrane attachment protein
GNE09_08005	COG1484	DNA-dependent DNA replication
GNE09_08020	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
GNE09_08045	COG1363	Peptidase, m42
GNE09_08050	COG1309	transcriptional regulator
GNE09_08055	COG1566	PFAM secretion protein HlyD family protein
GNE09_08060	COG2814	Major facilitator Superfamily
GNE09_08075	COG1418	mRNA catabolic process
GNE09_08085	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
GNE09_08100	COG0017	Asparaginyl-tRNA synthetase
GNE09_08125	COG1286	toxin biosynthetic process
GNE09_08130	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
GNE09_08130	COG1796	DNA polymerase
GNE09_08140	COG1187	pseudouridine synthase activity
GNE09_08145	COG1114	Component of the transport system for branched-chain amino acids
GNE09_08150	COG5386	Cell surface protein
GNE09_08175	COG1120	ATPase activity
GNE09_08180	COG4509	Sortase family
GNE09_08190	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
GNE09_08195	COG4895	conserved protein (DUF2196)
GNE09_08200	COG0745	RESPONSE REGULATOR receiver
GNE09_08205	COG2205	protein histidine kinase activity
GNE09_08210	COG1131	(ABC) transporter
GNE09_08225	COG2318	DinB family
GNE09_08250	COG0318	PFAM AMP-dependent synthetase and ligase
GNE09_08255	COG1309	transcriptional regulator
GNE09_08260	COG1024	Enoyl-CoA hydratase
GNE09_08265	COG2086	electron transfer activity
GNE09_08270	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
GNE09_08275	COG3118	belongs to the thioredoxin family
GNE09_08285	COG1719	4-vinyl reductase, 4VR
GNE09_08295	COG1053	succinate dehydrogenase
GNE09_08300	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
GNE09_08305	COG0824	Thioesterase
GNE09_08310	COG1876	peptidase activity
GNE09_08315	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
GNE09_08320	COG1360	Flagellar Motor Protein
GNE09_08325	COG2503	HAD superfamily, subfamily IIIB (Acid phosphatase)
GNE09_08330	COG4152	abc transporter atp-binding protein
GNE09_08335	COG1668	transmembrane transport
GNE09_08340	COG1959	2 iron, 2 sulfur cluster binding
GNE09_08350	COG0697	spore germination
GNE09_08355	COG1396	sequence-specific DNA binding
GNE09_08360	COG1983	PspC domain protein
GNE09_08365	COG0402	S-adenosylhomocysteine deaminase activity
GNE09_08370	COG2233	PERMEase
GNE09_08375	COG2197	response regulator
GNE09_08385	COG1309	transcriptional regulator
GNE09_08405	COG5401	PFAM Sporulation and spore germination
GNE09_08420	COG0622	Phosphoesterase
GNE09_08465	COG0470	DNA polymerase III
GNE09_08465	COG1067	ATP-dependent peptidase activity
GNE09_08480	COG1764	response to oxidative stress
GNE09_08485	COG1846	Transcriptional regulator
GNE09_08505	COG1587	Uroporphyrinogen-III synthase
GNE09_08510	COG0113	porphobilinogen synthase activity
GNE09_08520	COG1388	LysM domain
GNE09_08535	COG0285	dihydrofolate synthase activity
GNE09_08555	COG1077	Cell shape determining protein MreB Mrl
GNE09_08560	COG1792	Involved in formation and maintenance of cell shape
GNE09_08575	COG2894	cell division
GNE09_08580	COG0739	heme binding
GNE09_08585	COG1994	Peptidase M50
GNE09_08590	COG1530	ribonuclease E activity
GNE09_08600	COG2868	ribosomal protein
GNE09_08610	COG3290	protein histidine kinase activity
GNE09_08620	COG0745	RESPONSE REGULATOR receiver
GNE09_08625	COG5002	protein histidine kinase activity
GNE09_08630	COG1136	(ABC) transporter
GNE09_08635	COG0577	efflux transmembrane transporter activity
GNE09_08640	COG0577	efflux transmembrane transporter activity
GNE09_08645	COG0077	Prephenate dehydratase
GNE09_08655	COG2258	MOSC domain
GNE09_08660	COG1827	regulation of RNA biosynthetic process
GNE09_08665	COG1104	cysteine desulfurase activity
GNE09_08670	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
GNE09_08675	COG0157	Belongs to the NadC ModD family
GNE09_08705	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
GNE09_08735	COG1862	Preprotein translocase
GNE09_08745	COG2323	membrane
GNE09_08750	COG2244	polysaccharide biosynthetic process
GNE09_08760	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
GNE09_08760	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
GNE09_08765	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
GNE09_08770	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
GNE09_08770	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
GNE09_08780	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
GNE09_08805	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
GNE09_08815	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
GNE09_08820	COG1959	2 iron, 2 sulfur cluster binding
GNE09_08825	COG1104	cysteine desulfurase activity
GNE09_08840	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
GNE09_08860	COG0628	permease
GNE09_08890	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
GNE09_08925	COG0768	penicillin binding
GNE09_08950	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
GNE09_08955	COG0626	cystathionine gamma-synthase activity
GNE09_08960	COG1454	alcohol dehydrogenase
GNE09_08960	COG1012	belongs to the aldehyde dehydrogenase family
GNE09_08970	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
GNE09_09010	COG2259	Doxx family
GNE09_09015	COG2514	catechol 2,3-dioxygenase activity
GNE09_09025	COG3186	Phenylalanine-4-hydroxylase
GNE09_09030	COG1404	Belongs to the peptidase S8 family
GNE09_09065	COG2267	carboxylic ester hydrolase activity
GNE09_09075	COG1785	Belongs to the alkaline phosphatase family
GNE09_09085	COG2357	RelA SpoT domain protein
GNE09_09090	COG0778	Nitroreductase
GNE09_09100	COG1595	DNA-templated transcription, initiation
GNE09_09110	COG1191	sigma factor activity
GNE09_09125	COG2179	HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
GNE09_09130	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
GNE09_09140	COG1534	Rna-binding protein
GNE09_09150	COG1713	HD superfamily hydrolase involved in NAD metabolism
GNE09_09155	COG0799	negative regulation of ribosome biogenesis
GNE09_09160	COG2226	methyltransferase
GNE09_09165	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
GNE09_09170	COG1596	polysaccharide export
GNE09_09170	COG1555	photosystem II stabilization
GNE09_09175	COG2131	deaminase
GNE09_09180	COG2333	competence protein COMEC
GNE09_09180	COG0658	competence protein
GNE09_09190	COG1466	dna polymerase III delta subunit
GNE09_09215	COG1733	regulation of RNA biosynthetic process
GNE09_09220	COG0635	Involved in the biosynthesis of porphyrin-containing compound
GNE09_09250	COG1385	rRNA (uridine-N3-)-methyltransferase activity
GNE09_09255	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
GNE09_09265	COG1610	YqeY-like protein
GNE09_09285	COG1702	phosphate starvation-inducible protein PhoH
GNE09_09290	COG1480	7TM receptor with intracellular HD hydrolase
GNE09_09300	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
GNE09_09305	COG0295	cytidine deaminase activity
GNE09_09310	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
GNE09_09325	COG0517	IMP dehydrogenase activity
GNE09_09340	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
GNE09_09350	COG2384	SAM-dependent methyltransferase
GNE09_09355	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
GNE09_09385	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
GNE09_09390	COG1121	(ABC) transporter
GNE09_09395	COG1108	ABC-type Mn2 Zn2 transport systems permease components
GNE09_09400	COG0735	belongs to the Fur family
GNE09_09415	COG5521	maltodextrose utilization protein MalA
GNE09_09425	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
GNE09_09430	COG0477	Major facilitator Superfamily
GNE09_09445	COG0573	inorganic phosphate transmembrane transporter activity
GNE09_09450	COG0573	inorganic phosphate transmembrane transporter activity
GNE09_09460	COG0704	Plays a role in the regulation of phosphate uptake
GNE09_09465	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
GNE09_09475	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
GNE09_09480	COG4483	Protein conserved in bacteria
GNE09_09485	COG1940	carbohydrate kinase activity
GNE09_09495	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
GNE09_09515	COG0626	cystathionine gamma-synthase activity
GNE09_09520	COG0626	cystathionine gamma-synthase activity
GNE09_09525	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
GNE09_09525	COG0646	methionine synthase
GNE09_09530	COG0646	methionine synthase
GNE09_09530	COG1410	methionine synthase
GNE09_09585	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
GNE09_09590	COG1459	type II secretion system
GNE09_09655	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
GNE09_09695	COG2076	Multidrug Resistance protein
GNE09_09700	COG2076	Multidrug Resistance protein
GNE09_09710	COG1609	Transcriptional regulator
GNE09_09720	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
GNE09_09755	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
GNE09_09765	COG3872	metal-dependent enzyme
GNE09_09780	COG0006	proline dipeptidase activity
GNE09_09805	COG3854	ATPases associated with a variety of cellular activities
GNE09_09850	COG0511	ligase activity, forming carbon-carbon bonds
GNE09_09855	COG0439	Biotin carboxylase
GNE09_09860	COG1302	Protein conserved in bacteria
GNE09_09885	COG0142	geranyltranstransferase activity
GNE09_09895	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
GNE09_09905	COG0497	DNA recombination
GNE09_09910	COG0750	zinc metalloprotease
GNE09_09925	COG3093	addiction module antidote protein HigA
GNE09_09930	COG0584	glycerophosphoryl diester phosphodiesterase
GNE09_09940	COG3290	protein histidine kinase activity
GNE09_09940	COG3829	transcription factor binding
GNE09_09945	COG0280	phosphate acetyltransferase
GNE09_09950	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
GNE09_09960	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
GNE09_09965	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
GNE09_09970	COG0022	dehydrogenase e1 component
GNE09_09975	COG0508	dehydrogenase complex catalyzes the overall conversion of
GNE09_09980	COG0772	Belongs to the SEDS family
GNE09_09985	COG2323	membrane
GNE09_10005	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
GNE09_10010	COG0765	amino acid transport
GNE09_10015	COG1126	abc transporter atp-binding protein
GNE09_10020	COG4129	membrane
GNE09_10025	COG1376	ErfK ybiS ycfS ynhG family protein
GNE09_10040	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
GNE09_10045	COG2195	Cleaves the N-terminal amino acid of tripeptides
GNE09_10055	COG1285	pathogenesis
GNE09_10085	COG1760	l-serine dehydratase
GNE09_10090	COG1760	l-serine dehydratase
GNE09_10095	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
GNE09_10100	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
GNE09_10105	COG0300	oxidoreductase activity
GNE09_10150	COG1522	sequence-specific DNA binding
GNE09_10160	COG0737	Belongs to the 5'-nucleotidase family
GNE09_10175	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
GNE09_10190	COG2226	methyltransferase
GNE09_10190	COG1073	alpha beta
GNE09_10220	COG0307	riboflavin synthase, alpha
GNE09_10225	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
GNE09_10225	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
GNE09_10240	COG1073	alpha beta
GNE09_10245	COG0456	acetyltransferase
GNE09_10250	COG1609	Transcriptional regulator
GNE09_10255	COG2056	Na+-H+ antiporter family
GNE09_10270	COG0737	Belongs to the 5'-nucleotidase family
GNE09_10270	COG1525	nuclease
GNE09_10270	COG4085	toxin activity
GNE09_10280	COG0456	acetyltransferase
GNE09_10280	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
GNE09_10285	COG0656	L-ascorbic acid biosynthetic process
GNE09_10290	COG0667	Aldo Keto reductase
GNE09_10310	COG1300	Membrane
GNE09_10315	COG0735	belongs to the Fur family
GNE09_10325	COG4974	Belongs to the 'phage' integrase family
GNE09_10350	COG0598	Magnesium transport protein CorA
GNE09_10365	COG1846	Transcriptional regulator
GNE09_10385	COG1131	(ABC) transporter
GNE09_10390	COG1725	Transcriptional regulator
GNE09_10395	COG1686	Belongs to the peptidase S11 family
GNE09_10415	COG0733	neurotransmitter:sodium symporter activity
GNE09_10440	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
GNE09_10455	COG0697	spore germination
GNE09_10460	COG0561	phosphatase activity
GNE09_10465	COG4086	secreted protein
GNE09_10470	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
GNE09_10475	COG0456	acetyltransferase
GNE09_10480	COG1547	Domain of unknown function (DUF309)
GNE09_10505	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
GNE09_10525	COG3711	transcriptional antiterminator
GNE09_10530	COG2190	(PTS) system
GNE09_10530	COG1263	PTS System
GNE09_10530	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
GNE09_10560	COG2203	Gaf domain
GNE09_10560	COG2199	diguanylate cyclase activity
GNE09_10570	COG2084	Dehydrogenase
GNE09_10605	COG0436	Aminotransferase
GNE09_10610	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
GNE09_10630	COG1028	Short-chain dehydrogenase reductase Sdr
GNE09_10635	COG1695	Transcriptional regulator
GNE09_10665	COG0183	Belongs to the thiolase family
GNE09_10705	COG3842	ATPase activity
GNE09_10710	COG0366	Alpha amylase catalytic
GNE09_10720	COG2182	Extracellular solute-binding protein
GNE09_10725	COG1175	transmembrane transport
GNE09_10730	COG3833	ABC-type maltose transport systems, permease component
GNE09_10735	COG1609	Transcriptional regulator
GNE09_10740	COG0436	Aminotransferase
GNE09_10750	COG2205	protein histidine kinase activity
GNE09_10760	COG3209	COG3209 Rhs family protein
GNE09_10780	COG2814	Major facilitator Superfamily
GNE09_10825	COG1408	metallophosphoesterase
GNE09_10830	COG1028	Short-chain dehydrogenase reductase Sdr
GNE09_10835	COG2200	EAL domain
GNE09_10850	COG4703	Protein of unknown function (DUF1797)
GNE09_10855	COG1978	Selenoprotein B, glycine betaine sarcosine D-proline reductase family
GNE09_10865	COG0517	IMP dehydrogenase activity
GNE09_10870	COG0583	DNA-binding transcription factor activity
GNE09_10890	COG0569	domain protein
GNE09_10895	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
GNE09_10905	COG0561	phosphatase activity
GNE09_10920	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
GNE09_10925	COG0022	dehydrogenase e1 component
GNE09_10995	COG0483	inositol monophosphate 1-phosphatase activity
GNE09_11020	COG4896	Protein conserved in bacteria
GNE09_11030	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
GNE09_11035	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
GNE09_11045	COG0772	Belongs to the SEDS family
GNE09_11050	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
GNE09_11085	COG3336	cytochrome c oxidase
GNE09_11100	COG2340	Cysteine-rich secretory protein family
GNE09_11115	COG0406	alpha-ribazole phosphatase activity
GNE09_11120	COG3679	Belongs to the UPF0342 family
GNE09_11140	COG0742	ribosomal rna small subunit methyltransferase
GNE09_11150	COG3314	Sporulation integral membrane protein YlbJ
GNE09_11155	COG1752	Esterase of the alpha-beta hydrolase superfamily
GNE09_11160	COG3480	Lon protease (S16) C-terminal proteolytic domain
GNE09_11170	COG1399	metal-binding, possibly nucleic acid-binding protein
GNE09_11235	COG0772	Belongs to the SEDS family
GNE09_11240	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
GNE09_11255	COG0849	cell division
GNE09_11260	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
GNE09_11270	COG1191	sigma factor activity
GNE09_11275	COG1191	sigma factor activity
GNE09_11280	COG1873	PFAM PRC-barrel domain
GNE09_11290	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
GNE09_11300	COG0762	integral membrane protein
GNE09_11305	COG2302	S4 RNA-binding domain
GNE09_11310	COG3599	regulation of cell shape
GNE09_11330	COG0564	pseudouridine synthase activity
GNE09_11390	COG3069	C4-dicarboxylate transmembrane transporter activity
GNE09_11420	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
GNE09_11425	COG1561	YicC-like family, N-terminal region
GNE09_11445	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
GNE09_11450	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
GNE09_11465	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
GNE09_11465	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
GNE09_11475	COG0631	protein serine/threonine phosphatase activity
GNE09_11480	COG0515	serine threonine protein kinase
GNE09_11480	COG2815	serine threonine protein kinase
GNE09_11490	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
GNE09_11495	COG1564	THIamine pyrophosphokinase
GNE09_11510	COG1302	Protein conserved in bacteria
GNE09_11515	COG1461	Dihydroxyacetone kinase
GNE09_11535	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
GNE09_11540	COG1028	Short-chain dehydrogenase reductase Sdr
GNE09_11555	COG1196	nuclear chromosome segregation
GNE09_11560	COG0552	protein localization to endoplasmic reticulum
GNE09_11580	COG1837	Belongs to the UPF0109 family
GNE09_11620	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
GNE09_11625	COG0758	DNA mediated transformation
GNE09_11630	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
GNE09_11685	COG4589	Belongs to the CDS family
GNE09_11695	COG0750	zinc metalloprotease
GNE09_11715	COG0195	Participates in both transcription termination and antitermination
GNE09_11720	COG2740	Nucleic-acid-binding protein implicated in transcription termination
GNE09_11725	COG1358	cellular component organization or biogenesis
GNE09_11735	COG1550	Protein conserved in bacteria
GNE09_11750	COG0196	riboflavin kinase activity
GNE09_11765	COG0726	polysaccharide deacetylase
GNE09_11770	COG0612	Peptidase, M16
GNE09_11775	COG1873	PFAM PRC-barrel domain
GNE09_11780	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
GNE09_11785	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
GNE09_11790	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
GNE09_11795	COG0527	aspartate kinase activity
GNE09_11805	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
GNE09_11810	COG0740	serine-type endopeptidase activity
GNE09_11825	COG2188	Transcriptional regulator
GNE09_11850	COG0612	Peptidase, M16
GNE09_11855	COG0612	Peptidase, M16
GNE09_11860	COG0300	oxidoreductase activity
GNE09_11875	COG1426	Protein conserved in bacteria
GNE09_11880	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
GNE09_11900	COG1692	metallophosphoesterase
GNE09_11905	COG2359	stage V sporulation protein S
GNE09_11915	COG0674	pyruvate-flavodoxin oxidoreductase activity
GNE09_11915	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
GNE09_11920	COG1013	pyruvate-flavodoxin oxidoreductase activity
GNE09_11930	COG4550	Control of competence regulator ComK, YlbF/YmcA
GNE09_11955	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
GNE09_11970	COG3773	Cell wall hydrolase
GNE09_11980	COG0823	Involved in the tonB-independent uptake of proteins
GNE09_11985	COG0840	transmembrane signaling receptor activity
GNE09_12000	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
GNE09_12010	COG1346	cytolysis
GNE09_12050	COG2267	carboxylic ester hydrolase activity
GNE09_12065	COG2364	Membrane
GNE09_12075	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
GNE09_12080	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
GNE09_12085	COG2169	Transcriptional regulator
GNE09_12090	COG0708	Exodeoxyribonuclease III
GNE09_12095	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
GNE09_12100	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
GNE09_12105	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
GNE09_12110	COG1120	ATPase activity
GNE09_12115	COG2819	hydrolase of the alpha beta superfamily
GNE09_12135	COG1937	Protein conserved in bacteria
GNE09_12140	COG2608	mercury ion transmembrane transporter activity
GNE09_12145	COG2217	Heavy metal translocating P-type atpase
GNE09_12160	COG2116	formate transmembrane transporter activity
GNE09_12165	COG1408	metallophosphoesterase
GNE09_12180	COG1113	amino acid transport
GNE09_12190	COG2322	membrane
GNE09_12195	COG1979	alcohol dehydrogenase
GNE09_12200	COG1349	DNA-binding transcription factor activity
GNE09_12205	COG1105	Belongs to the carbohydrate kinase PfkB family
GNE09_12210	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
GNE09_12210	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
GNE09_12210	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
GNE09_12215	COG3584	3D domain protein
GNE09_12215	COG1388	LysM domain
GNE09_12245	COG0464	growth
GNE09_12250	COG2860	membrane
GNE09_12255	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
GNE09_12260	COG4100	CystaTHIonine beta-lyase family protein involved in aluminum resistance
GNE09_12265	COG0789	Transcriptional regulator
GNE09_12270	COG0174	glutamine synthetase
GNE09_12275	COG1695	Transcriptional regulator
GNE09_12295	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
GNE09_12305	COG0737	Belongs to the 5'-nucleotidase family
GNE09_12345	COG1132	(ABC) transporter
GNE09_12350	COG1132	(ABC) transporter
GNE09_12375	COG0730	response to heat
GNE09_12390	COG1346	cytolysis
GNE09_12400	COG0583	DNA-binding transcription factor activity
GNE09_12420	COG1131	(ABC) transporter
GNE09_12440	COG0785	Cytochrome C biogenesis protein
GNE09_12445	COG4846	Membrane protein involved in cytochrome C biogenesis
GNE09_12495	COG0010	Belongs to the arginase family
GNE09_12500	COG1329	Transcriptional regulator
GNE09_12505	COG1902	pentaerythritol trinitrate reductase activity
GNE09_12510	COG0069	glutamate synthase activity
GNE09_12520	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
GNE09_12525	COG0346	lactoylglutathione lyase activity
GNE09_12530	COG0400	carboxylic ester hydrolase activity
GNE09_12535	COG5002	protein histidine kinase activity
GNE09_12545	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
GNE09_12585	COG0318	PFAM AMP-dependent synthetase and ligase
GNE09_12590	COG1268	BioY protein
GNE09_12595	COG0318	PFAM AMP-dependent synthetase and ligase
GNE09_12600	COG0183	Belongs to the thiolase family
GNE09_12615	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
GNE09_12625	COG2211	Major facilitator Superfamily
GNE09_12645	COG0726	polysaccharide deacetylase
GNE09_12655	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
GNE09_12670	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
GNE09_12695	COG0824	Thioesterase
GNE09_12700	COG4841	protein insertion into membrane
GNE09_12720	COG0745	RESPONSE REGULATOR receiver
GNE09_12725	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
GNE09_12730	COG1832	CoA-binding protein
GNE09_12735	COG0187	DNA topoisomerase II activity
GNE09_12740	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
GNE09_12745	COG0673	inositol 2-dehydrogenase activity
GNE09_12765	COG1131	(ABC) transporter
GNE09_12775	COG1595	DNA-templated transcription, initiation
GNE09_12785	COG1316	TRANSCRIPTIONal
GNE09_12790	COG1301	dicarboxylic acid transport
GNE09_12795	COG4166	transmembrane transport
GNE09_12805	COG4166	transmembrane transport
GNE09_12810	COG4166	transmembrane transport
GNE09_12815	COG2226	methyltransferase
GNE09_12860	COG0697	spore germination
GNE09_12865	COG3383	formate dehydrogenase (NAD+) activity
GNE09_12870	COG2427	Protein of unknown function (DUF1641)
GNE09_12875	COG5609	conserved protein (DUF2294)
GNE09_12880	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
GNE09_12890	COG2116	formate transmembrane transporter activity
GNE09_12895	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
GNE09_12905	COG0314	molybdopterin synthase activity
GNE09_12915	COG0489	protein tyrosine kinase activity
GNE09_12930	COG3326	Membrane
GNE09_12935	COG2962	Rard protein
GNE09_12940	COG1963	PFAM Acid phosphatase vanadium-dependent haloperoxidase related
GNE09_12945	COG1657	PFAM Prenyltransferase squalene oxidase
GNE09_12955	COG1028	Short-chain dehydrogenase reductase Sdr
GNE09_12960	COG1012	belongs to the aldehyde dehydrogenase family
GNE09_12970	COG4145	pantothenate transmembrane transporter activity
GNE09_12985	COG0165	Argininosuccinate lyase
GNE09_12995	COG1028	Short-chain dehydrogenase reductase Sdr
GNE09_13015	COG0494	nUDIX hydrolase
GNE09_13025	COG0716	FMN binding
GNE09_13035	COG1278	Cold shock
GNE09_13060	COG2720	vancomycin resistance protein
GNE09_13065	COG2514	catechol 2,3-dioxygenase activity
GNE09_13075	COG1285	pathogenesis
GNE09_13085	COG3852	Histidine kinase
GNE09_13110	COG1876	peptidase activity
GNE09_13125	COG1309	transcriptional regulator
GNE09_13175	COG0457	Tetratricopeptide repeat
GNE09_13195	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
GNE09_13215	COG0697	spore germination
GNE09_13225	COG3397	chitin binding
GNE09_13230	COG0823	Involved in the tonB-independent uptake of proteins
GNE09_13240	COG0463	Glycosyl transferase, family 2
GNE09_13245	COG0463	Glycosyl transferase, family 2
GNE09_13250	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
GNE09_13260	COG1088	dTDP-glucose 4,6-dehydratase activity
GNE09_13265	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
GNE09_13285	COG2089	acid synthase
GNE09_13295	COG4641	Protein conserved in bacteria
GNE09_13310	COG1252	NADH dehydrogenase
GNE09_13330	COG0277	FAD linked oxidase domain protein
GNE09_13335	COG0385	Bile acid
GNE09_13355	COG0604	alcohol dehydrogenase
GNE09_13360	COG0640	Transcriptional regulator
GNE09_13370	COG0584	glycerophosphoryl diester phosphodiesterase
GNE09_13385	COG2271	Major facilitator Superfamily
GNE09_13395	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
GNE09_13425	COG2957	Belongs to the agmatine deiminase family
GNE09_13430	COG1164	Oligoendopeptidase f
GNE09_13435	COG2162	N-hydroxyarylamine O-acetyltransferase activity
GNE09_13470	COG0583	DNA-binding transcription factor activity
GNE09_13500	COG3739	integral membrane protein
GNE09_13505	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
GNE09_13510	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
GNE09_13515	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
GNE09_13530	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
GNE09_13535	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
GNE09_13565	COG2814	Major facilitator Superfamily
GNE09_13570	COG1113	amino acid transport
GNE09_13575	COG0604	alcohol dehydrogenase
GNE09_13580	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
GNE09_13610	COG2072	flavoprotein involved in K transport
GNE09_13640	COG1151	hydroxylamine reductase activity
GNE09_13685	COG1191	sigma factor activity
GNE09_13695	COG0726	polysaccharide deacetylase
GNE09_13710	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
GNE09_13715	COG1733	regulation of RNA biosynthetic process
GNE09_13735	COG0384	phenazine biosynthesis protein PhzF
GNE09_13760	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
GNE09_13780	COG0673	inositol 2-dehydrogenase activity
GNE09_13785	COG2188	Transcriptional regulator
GNE09_13815	COG0814	amino acid
GNE09_13845	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
GNE09_13860	COG2706	6-phosphogluconolactonase activity
GNE09_13865	COG3813	Protein conserved in bacteria
GNE09_13870	COG1357	PFAM Pentapeptide repeats (8 copies)
GNE09_13885	COG0697	spore germination
GNE09_13890	COG0789	Transcriptional regulator
GNE09_13895	COG1253	flavin adenine dinucleotide binding
GNE09_13925	COG0477	Major facilitator Superfamily
GNE09_13935	COG0500	methyltransferase
GNE09_13965	COG0628	permease
GNE09_13975	COG0180	Tryptophanyl-tRNA synthetase
GNE09_13985	COG0738	Major facilitator superfamily
GNE09_13990	COG1940	carbohydrate kinase activity
GNE09_13995	COG0346	lactoylglutathione lyase activity
GNE09_14005	COG1051	belongs to the nudix hydrolase family
GNE09_14025	COG1011	Hydrolase
GNE09_14050	COG1131	(ABC) transporter
GNE09_14060	COG1028	Short-chain dehydrogenase reductase Sdr
GNE09_14090	COG0778	Nitroreductase
GNE09_14095	COG1733	regulation of RNA biosynthetic process
GNE09_14115	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
GNE09_14120	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
GNE09_14130	COG2356	endonuclease I
GNE09_14135	COG1288	antiporter activity
GNE09_14190	COG2249	NAD(P)H dehydrogenase (quinone) activity
GNE09_14200	COG2031	fatty acid transporter
GNE09_14215	COG2814	Major facilitator Superfamily
GNE09_14220	COG1846	Transcriptional regulator
GNE09_14245	COG2843	Capsule synthesis protein
GNE09_14250	COG1876	peptidase activity
GNE09_14275	COG5444	nuclease activity
GNE09_14445	COG2814	Major facilitator Superfamily
GNE09_14455	COG5632	N-Acetylmuramoyl-L-alanine amidase
GNE09_14455	COG3409	Peptidoglycan-binding domain 1 protein
GNE09_14475	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
GNE09_14475	COG2207	Transcriptional regulator
GNE09_14480	COG0662	Cupin 2, conserved barrel domain protein
GNE09_14500	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
GNE09_14525	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
GNE09_14530	COG2808	Putative FMN-binding domain
GNE09_14535	COG0456	acetyltransferase
GNE09_14540	COG1846	Transcriptional regulator
GNE09_14545	COG2364	Membrane
GNE09_14555	COG5002	protein histidine kinase activity
GNE09_14555	COG3850	Histidine kinase
GNE09_14560	COG0577	efflux transmembrane transporter activity
GNE09_14580	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
GNE09_14590	COG1690	Belongs to the RtcB family
GNE09_14600	COG2515	1-aminocyclopropane-1-carboxylate deaminase
GNE09_14660	COG0277	FAD linked oxidase domain protein
GNE09_14695	COG3850	Histidine kinase
GNE09_14695	COG5002	protein histidine kinase activity
GNE09_14700	COG0745	RESPONSE REGULATOR receiver
GNE09_14725	COG0346	lactoylglutathione lyase activity
GNE09_14740	COG1522	sequence-specific DNA binding
GNE09_14745	COG1028	Short-chain dehydrogenase reductase Sdr
GNE09_14755	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
GNE09_14755	COG3320	Male sterility
GNE09_14765	COG0825	malonyl-CoA metabolic process
GNE09_14780	COG0640	Transcriptional regulator
GNE09_14785	COG0346	lactoylglutathione lyase activity
GNE09_14790	COG0798	PFAM Bile acid sodium symporter
GNE09_14815	COG1121	(ABC) transporter
GNE09_14820	COG1108	ABC-type Mn2 Zn2 transport systems permease components
GNE09_14825	COG0803	Belongs to the bacterial solute-binding protein 9 family
GNE09_14830	COG1575	Belongs to the MenA family. Type 1 subfamily
GNE09_14840	COG0726	polysaccharide deacetylase
GNE09_14845	COG0697	spore germination
GNE09_14860	COG5609	conserved protein (DUF2294)
GNE09_14865	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
GNE09_14875	COG0288	reversible hydration of carbon dioxide
GNE09_14880	COG0415	Belongs to the DNA photolyase family
GNE09_14900	COG1073	alpha beta
GNE09_14920	COG0598	Magnesium transport protein CorA
GNE09_14925	COG1846	Transcriptional regulator
GNE09_14930	COG0583	DNA-binding transcription factor activity
GNE09_14950	COG1335	isochorismatase
GNE09_14955	COG2267	carboxylic ester hydrolase activity
GNE09_14960	COG0737	Belongs to the 5'-nucleotidase family
GNE09_14975	COG2124	cytochrome p450
GNE09_14985	COG1115	amino acid carrier protein
GNE09_14995	COG4191	Histidine kinase
GNE09_15000	COG0784	Response regulator, receiver
GNE09_15005	COG0697	spore germination
GNE09_15010	COG0531	amino acid
GNE09_15020	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
GNE09_15025	COG0531	amino acid
GNE09_15070	COG5002	protein histidine kinase activity
GNE09_15100	COG1396	sequence-specific DNA binding
GNE09_15105	COG0252	asparaginase activity
GNE09_15110	COG1027	Aspartate ammonia-lyase
GNE09_15120	COG1063	alcohol dehydrogenase
GNE09_15140	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
GNE09_15145	COG3848	Pyruvate phosphate dikinase
GNE09_15145	COG0574	Belongs to the PEP-utilizing enzyme family
GNE09_15165	COG1633	Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME)
GNE09_15200	COG1960	acyl-CoA dehydrogenase activity
GNE09_15210	COG0640	Transcriptional regulator
GNE09_15225	COG1414	Transcriptional regulator
GNE09_15230	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
GNE09_15290	COG5002	protein histidine kinase activity
GNE09_15300	COG1329	Transcriptional regulator
GNE09_15350	COG0833	amino acid
GNE09_15360	COG0730	response to heat
GNE09_15400	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
GNE09_15405	COG0697	spore germination
GNE09_15410	COG2816	NAD+ diphosphatase activity
GNE09_15420	COG0456	acetyltransferase
GNE09_15425	COG2207	Transcriptional regulator
GNE09_15445	COG4884	unkown
GNE09_15445	COG3831	ATPase activity
GNE09_15465	COG1846	Transcriptional regulator
GNE09_15470	COG0778	Nitroreductase
GNE09_15510	COG5444	nuclease activity
GNE09_15565	COG0714	Associated with various cellular activities
GNE09_15600	COG0753	catalase activity
GNE09_15605	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
GNE09_15625	COG0714	Associated with various cellular activities
GNE09_15645	COG0346	lactoylglutathione lyase activity
GNE09_15670	COG3655	Transcriptional regulator
GNE09_15685	COG2720	vancomycin resistance protein
GNE09_15695	COG3239	Fatty acid desaturase
GNE09_15710	COG0833	amino acid
GNE09_15715	COG1414	Transcriptional regulator
GNE09_15720	COG4187	Peptidase family M20/M25/M40
GNE09_15725	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
GNE09_15740	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
GNE09_15745	COG0640	Transcriptional regulator
GNE09_15755	COG2329	Antibiotic biosynthesis monooxygenase
GNE09_15785	COG1070	Carbohydrate kinase
GNE09_15790	COG2390	Transcriptional regulator
GNE09_15795	COG1129	ABC transporter
GNE09_15800	COG1172	Belongs to the binding-protein-dependent transport system permease family
GNE09_15810	COG1879	ABC-type sugar transport system periplasmic component
GNE09_15905	COG0287	Prephenate dehydrogenase
GNE09_15920	COG1309	transcriptional regulator
GNE09_15930	COG0488	(ABC) transporter
GNE09_15935	COG1368	sulfuric ester hydrolase activity
GNE09_15940	COG0861	Integral membrane protein TerC family
GNE09_15960	COG0726	polysaccharide deacetylase
GNE09_15970	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
GNE09_15980	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
GNE09_15985	COG4912	Dna alkylation repair
GNE09_16005	COG2318	DinB family
GNE09_16010	COG0697	spore germination
GNE09_16020	COG2746	aminoglycoside 3-N-acetyltransferase activity
GNE09_16050	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
GNE09_16055	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
GNE09_16070	COG0628	permease
GNE09_16115	COG1131	(ABC) transporter
GNE09_16130	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
GNE09_16140	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
GNE09_16145	COG0436	Aminotransferase
GNE09_16180	COG2226	methyltransferase
GNE09_16195	COG2261	transglycosylase associated protein
GNE09_16220	COG2814	Major facilitator Superfamily
GNE09_16220	COG0477	Major facilitator Superfamily
GNE09_16225	COG4533	DNA binding
GNE09_16230	COG0789	Transcriptional regulator
GNE09_16235	COG1664	Polymer-forming cytoskeletal
GNE09_16245	COG2814	Major facilitator Superfamily
GNE09_16285	COG1307	EDD domain protein, DegV family
GNE09_16290	COG1164	Oligoendopeptidase f
GNE09_16315	COG0745	RESPONSE REGULATOR receiver
GNE09_16380	COG4948	Mandelate Racemase Muconate Lactonizing
GNE09_16390	COG4166	transmembrane transport
GNE09_16395	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
GNE09_16405	COG0586	Pfam SNARE associated Golgi protein
GNE09_16410	COG1078	dGTPase activity
GNE09_16415	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
GNE09_16455	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
GNE09_16460	COG3938	Belongs to the proline racemase family
GNE09_16470	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
GNE09_16475	COG1012	belongs to the aldehyde dehydrogenase family
GNE09_16480	COG1115	amino acid carrier protein
GNE09_16500	COG3397	chitin binding
GNE09_16550	COG0514	ATP-dependent DNA helicase (RecQ)
GNE09_16565	COG3973	AAA domain
GNE09_16570	COG0456	acetyltransferase
GNE09_16620	COG2315	Protein conserved in bacteria
GNE09_16625	COG2226	methyltransferase
GNE09_16630	COG2205	protein histidine kinase activity
GNE09_16640	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
GNE09_16655	COG3397	chitin binding
GNE09_16670	COG2153	protein acetylation
GNE09_16700	COG4175	Glycine betaine
GNE09_16700	COG0517	IMP dehydrogenase activity
GNE09_16705	COG4176	ABC-type proline glycine betaine transport system permease component
GNE09_16735	COG1028	Short-chain dehydrogenase reductase Sdr
GNE09_16745	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
GNE09_16755	COG0508	dehydrogenase complex catalyzes the overall conversion of
GNE09_16760	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
GNE09_16775	COG1959	2 iron, 2 sulfur cluster binding
GNE09_16790	COG1349	DNA-binding transcription factor activity
GNE09_16805	COG3284	Transcriptional regulator
GNE09_16825	COG1309	transcriptional regulator
GNE09_16860	COG3409	Peptidoglycan-binding domain 1 protein
GNE09_16860	COG3773	Cell wall hydrolase
GNE09_16865	COG2959	enzyme of heme biosynthesis
GNE09_16880	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
GNE09_16915	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
GNE09_16920	COG0697	spore germination
GNE09_16945	COG0737	Belongs to the 5'-nucleotidase family
GNE09_16950	COG3227	Zinc metalloprotease (Elastase)
GNE09_16955	COG1523	belongs to the glycosyl hydrolase 13 family
GNE09_16970	COG0076	glutamate decarboxylase activity
GNE09_16980	COG1073	alpha beta
GNE09_16985	COG0577	efflux transmembrane transporter activity
GNE09_17005	COG5002	protein histidine kinase activity
GNE09_17010	COG0745	RESPONSE REGULATOR receiver
GNE09_17040	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
GNE09_17060	COG1819	glycosyl
GNE09_17095	COG0322	excinuclease ABC activity
GNE09_17135	COG4667	esterase of the alpha-beta hydrolase superfamily
GNE09_17185	COG0592	DNA-directed DNA polymerase activity
GNE09_17200	COG2223	nitrite transmembrane transporter activity
GNE09_17215	COG0494	nUDIX hydrolase
GNE09_17240	COG0697	spore germination
GNE09_17245	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
GNE09_17265	COG0584	glycerophosphoryl diester phosphodiesterase
GNE09_17330	COG0671	phosphoesterase, PA-phosphatase related
GNE09_17335	COG0604	alcohol dehydrogenase
GNE09_17365	COG2169	Transcriptional regulator
GNE09_17460	COG1819	glycosyl
GNE09_17515	COG2124	cytochrome p450
GNE09_17645	COG0740	serine-type endopeptidase activity
GNE09_17655	COG4626	Terminase
GNE09_17655	COG1802	Transcriptional regulator
GNE09_17685	COG0582	viral genome integration into host DNA
GNE09_17755	COG1484	DNA-dependent DNA replication
GNE09_17775	COG1396	sequence-specific DNA binding
GNE09_17785	COG0582	viral genome integration into host DNA
GNE09_17815	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
GNE09_17825	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
GNE09_17855	COG1136	(ABC) transporter
GNE09_17875	COG0667	Aldo Keto reductase
GNE09_17880	COG0583	DNA-binding transcription factor activity
GNE09_17885	COG2205	protein histidine kinase activity
GNE09_17890	COG0745	RESPONSE REGULATOR receiver
GNE09_17900	COG3773	Cell wall hydrolase
GNE09_17905	COG1384	Belongs to the class-I aminoacyl-tRNA synthetase family
GNE09_17910	COG1384	Belongs to the class-I aminoacyl-tRNA synthetase family
GNE09_17920	COG3386	PFAM SMP-30 Gluconolaconase
GNE09_17930	COG0693	protein deglycase activity
GNE09_17945	COG1063	alcohol dehydrogenase
GNE09_17965	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
GNE09_18010	COG1733	regulation of RNA biosynthetic process
GNE09_18015	COG1028	Short-chain dehydrogenase reductase Sdr
GNE09_18025	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
GNE09_18060	COG3227	Zinc metalloprotease (Elastase)
GNE09_18075	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
GNE09_18145	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
GNE09_18150	COG1024	Enoyl-CoA hydratase
GNE09_18160	COG0511	ligase activity, forming carbon-carbon bonds
GNE09_18165	COG0439	Biotin carboxylase
GNE09_18170	COG1960	acyl-CoA dehydrogenase activity
GNE09_18185	COG1309	transcriptional regulator
GNE09_18205	COG1408	metallophosphoesterase
GNE09_18230	COG1595	DNA-templated transcription, initiation
GNE09_18265	COG0726	polysaccharide deacetylase
GNE09_18280	COG1396	sequence-specific DNA binding
GNE09_18325	COG2234	aminopeptidase activity
GNE09_18335	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
GNE09_18355	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
GNE09_18360	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
GNE09_18370	COG0456	acetyltransferase
GNE09_18380	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
GNE09_18385	COG0741	lytic transglycosylase activity
GNE09_18430	COG1028	Short-chain dehydrogenase reductase Sdr
GNE09_18460	COG2814	Major facilitator Superfamily
GNE09_18485	COG0730	response to heat
GNE09_18495	COG2002	toxin-antitoxin pair type II binding
GNE09_18520	COG2195	Cleaves the N-terminal amino acid of tripeptides
GNE09_18560	COG3961	Belongs to the TPP enzyme family
GNE09_18565	COG2226	methyltransferase
GNE09_18575	COG3615	Tellurite resistance protein tehB
GNE09_18575	COG0500	methyltransferase
GNE09_18590	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
GNE09_18615	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
GNE09_18625	COG2971	BadF BadG BcrA BcrD
GNE09_18650	COG1649	PFAM Uncharacterised BCR, COG1649
GNE09_18670	COG1595	DNA-templated transcription, initiation
GNE09_18675	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
GNE09_18705	COG1396	sequence-specific DNA binding
GNE09_18730	COG1132	(ABC) transporter
GNE09_18735	COG1132	(ABC) transporter
GNE09_18750	COG2258	MOSC domain
GNE09_18755	COG0583	DNA-binding transcription factor activity
GNE09_18775	COG0583	DNA-binding transcription factor activity
GNE09_18805	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
GNE09_18840	COG1247	-acetyltransferase
GNE09_18875	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
GNE09_18935	COG1136	(ABC) transporter
GNE09_18940	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
GNE09_18945	COG1187	pseudouridine synthase activity
GNE09_18965	COG1115	amino acid carrier protein
GNE09_18975	COG2318	DinB family
GNE09_18985	COG0776	regulation of translation
GNE09_19000	COG2814	Major facilitator Superfamily
GNE09_19005	COG3251	PFAM MbtH domain protein
GNE09_19010	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
GNE09_19015	COG3433	isochorismatase activity
GNE09_19015	COG1535	isochorismatase
GNE09_19020	COG1021	2,3-dihydroxybenzoate-AMP ligase
GNE09_19025	COG1169	isochorismate synthase
GNE09_19030	COG1028	Short-chain dehydrogenase reductase Sdr
GNE09_19035	COG2223	nitrite transmembrane transporter activity
GNE09_19050	COG0419	ATPase involved in DNA repair
GNE09_19055	COG0420	3'-5' exonuclease activity
GNE09_19075	COG1280	lysine exporter protein (LysE YggA)
GNE09_19085	COG2084	Dehydrogenase
GNE09_19090	COG1960	acyl-CoA dehydrogenase activity
GNE09_19095	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
GNE09_19100	COG2079	MmgE PrpD family protein
GNE09_19105	COG0372	Belongs to the citrate synthase family
GNE09_19110	COG4841	protein insertion into membrane
GNE09_19115	COG2814	Major facilitator Superfamily
GNE09_19145	COG0300	oxidoreductase activity
GNE09_19240	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
GNE09_19245	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
GNE09_19250	COG0671	phosphoesterase, PA-phosphatase related
GNE09_19295	COG1509	lysine 2,3-aminomutase activity
GNE09_19305	COG0456	acetyltransferase
GNE09_19310	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
GNE09_19315	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
GNE09_19320	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
GNE09_19325	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
GNE09_19340	COG5506	Protein of unknown function (DUF1694)
GNE09_19345	COG1012	belongs to the aldehyde dehydrogenase family
GNE09_19350	COG1253	flavin adenine dinucleotide binding
GNE09_19390	COG0517	IMP dehydrogenase activity
GNE09_19390	COG1125	glycine betaine transport
GNE09_19425	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
GNE09_19450	COG1064	alcohol dehydrogenase
GNE09_19455	COG0384	phenazine biosynthesis protein PhzF
GNE09_19460	COG1737	Transcriptional regulator
GNE09_19465	COG2197	response regulator
GNE09_19475	COG0668	transmembrane transport
GNE09_19480	COG1051	belongs to the nudix hydrolase family
GNE09_19485	COG1335	isochorismatase
GNE09_19500	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
GNE09_19505	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
GNE09_19510	COG0860	N-Acetylmuramoyl-L-alanine amidase
GNE09_19525	COG0367	asparagine synthase
GNE09_19530	COG0071	Belongs to the small heat shock protein (HSP20) family
GNE09_19535	COG1999	signal sequence binding
GNE09_19545	COG1307	EDD domain protein, DegV family
GNE09_19565	COG1272	protein, Hemolysin III
GNE09_19570	COG0204	Acyl-transferase
GNE09_19580	COG0768	penicillin binding
GNE09_19610	COG0546	phosphoglycolate phosphatase activity
GNE09_19625	COG1131	(ABC) transporter
GNE09_19635	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
GNE09_19650	COG0456	acetyltransferase
GNE09_19660	COG1794	racemase activity, acting on amino acids and derivatives
GNE09_19670	COG2610	gluconate transmembrane transporter activity
GNE09_19695	COG0733	neurotransmitter:sodium symporter activity
GNE09_19700	COG0017	Asparaginyl-tRNA synthetase
GNE09_19740	COG0018	arginyl-trna synthetase
GNE09_19745	COG2521	methyltransferase
GNE09_19745	COG2136	Putative SAM-dependent methyltransferase
GNE09_19760	COG1413	lyase activity
GNE09_19770	COG0629	single-stranded DNA binding
GNE09_19785	COG0488	(ABC) transporter
GNE09_19790	COG1418	mRNA catabolic process
GNE09_19805	COG0457	Tetratricopeptide repeat
GNE09_19820	COG2359	stage V sporulation protein S
GNE09_19855	COG2846	Di-iron-containing protein involved in the repair of iron-sulfur clusters
GNE09_19860	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
GNE09_19865	COG2146	nitrite reductase [NAD(P)H] activity
GNE09_19870	COG1587	Uroporphyrinogen-III synthase
GNE09_19870	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
GNE09_19875	COG2138	Cobalamin (vitamin B12) biosynthesis CbiX protein
GNE09_19880	COG1648	precorrin-2 dehydrogenase activity
GNE09_19900	COG2223	nitrite transmembrane transporter activity
GNE09_19910	COG0314	molybdopterin synthase activity
GNE09_19915	COG0303	'Molybdopterin
GNE09_19920	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
GNE09_19925	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
GNE09_19930	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
GNE09_19935	COG2181	nitrate reductase activity
GNE09_19940	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
GNE09_19945	COG1140	nitrate reductase beta subunit
GNE09_19950	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
GNE09_19955	COG0714	Associated with various cellular activities
GNE09_19960	COG1721	protein (some members contain a von Willebrand factor type A (vWA) domain
GNE09_19965	COG1305	Transglutaminase-like
GNE09_19970	COG0386	Belongs to the glutathione peroxidase family
GNE09_19980	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
GNE09_19980	COG0426	domain, Protein
GNE09_19990	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
GNE09_20000	COG1595	DNA-templated transcription, initiation
GNE09_20005	COG0604	alcohol dehydrogenase
GNE09_20015	COG0346	lactoylglutathione lyase activity
GNE09_20020	COG1082	Xylose isomerase domain protein TIM barrel
GNE09_20045	COG2226	methyltransferase
GNE09_20070	COG3874	Sporulation protein YtfJ
GNE09_20080	COG4974	Belongs to the 'phage' integrase family
GNE09_20165	COG1196	nuclear chromosome segregation
GNE09_20275	COG0456	acetyltransferase
GNE09_20310	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
GNE09_20315	COG1819	glycosyl
GNE09_20335	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
GNE09_20350	COG1846	Transcriptional regulator
GNE09_20355	COG0561	phosphatase activity
GNE09_20365	COG0860	N-Acetylmuramoyl-L-alanine amidase
GNE09_20380	COG2211	Major facilitator Superfamily
GNE09_20395	COG1876	peptidase activity
GNE09_20405	COG0860	N-Acetylmuramoyl-L-alanine amidase
GNE09_20425	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
GNE09_20430	COG1114	Component of the transport system for branched-chain amino acids
GNE09_20455	COG1253	flavin adenine dinucleotide binding
GNE09_20460	COG2839	Protein conserved in bacteria
GNE09_20465	COG0702	epimerase
GNE09_20490	COG1607	acyl-coa hydrolase
GNE09_20495	COG3689	TIGRFAM TIGR03943 family protein
GNE09_20510	COG2244	polysaccharide biosynthetic process
GNE09_20515	COG0586	Pfam SNARE associated Golgi protein
GNE09_20520	COG1051	belongs to the nudix hydrolase family
GNE09_20525	COG5337	Spore coat protein CotH
GNE09_20535	COG0406	alpha-ribazole phosphatase activity
GNE09_20550	COG4166	transmembrane transport
GNE09_20560	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
GNE09_20570	COG0702	epimerase
GNE09_20575	COG0803	Belongs to the bacterial solute-binding protein 9 family
GNE09_20580	COG0456	acetyltransferase
GNE09_20585	COG0523	cobalamin synthesis protein
GNE09_20590	COG4989	oxidoreductase activity
GNE09_20595	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
GNE09_20600	COG1231	oxidoreductase activity
GNE09_20610	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
GNE09_20625	COG0783	Belongs to the Dps family
GNE09_20630	COG3949	Membrane
GNE09_20645	COG0840	transmembrane signaling receptor activity
GNE09_20675	COG0667	Aldo Keto reductase
GNE09_20680	COG0640	Transcriptional regulator
GNE09_20685	COG1404	Belongs to the peptidase S8 family
GNE09_20690	COG2002	toxin-antitoxin pair type II binding
GNE09_20695	COG0577	efflux transmembrane transporter activity
GNE09_20730	COG1752	Esterase of the alpha-beta hydrolase superfamily
GNE09_20740	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
GNE09_20745	COG1279	arginine transmembrane transporter activity
GNE09_20760	COG1082	Xylose isomerase domain protein TIM barrel
GNE09_20775	COG0318	PFAM AMP-dependent synthetase and ligase
GNE09_20780	COG4264	IucA IucC family
GNE09_20795	COG1285	pathogenesis
GNE09_20810	COG1316	TRANSCRIPTIONal
GNE09_20835	COG0460	homoserine dehydrogenase
GNE09_20855	COG0726	polysaccharide deacetylase
GNE09_20875	COG0300	oxidoreductase activity
GNE09_20880	COG5002	protein histidine kinase activity
GNE09_20885	COG0745	RESPONSE REGULATOR receiver
GNE09_20890	COG1132	(ABC) transporter
GNE09_20900	COG0791	NLP P60 protein
GNE09_20900	COG1388	LysM domain
GNE09_20915	COG1686	Belongs to the peptidase S11 family
GNE09_20955	COG1216	Glycosyl transferase, family 2
GNE09_20965	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
GNE09_20970	COG4988	ABC transporter
GNE09_20975	COG1294	oxidase, subunit
GNE09_20980	COG1271	oxidase subunit
GNE09_21015	COG1216	Glycosyl transferase, family 2
GNE09_21030	COG1131	(ABC) transporter
GNE09_21035	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
GNE09_21040	COG0318	PFAM AMP-dependent synthetase and ligase
GNE09_21065	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
GNE09_21080	COG0583	DNA-binding transcription factor activity
GNE09_21100	COG0411	ABC transporter
GNE09_21110	COG0523	cobalamin synthesis protein
GNE09_21115	COG1231	oxidoreductase activity
GNE09_21125	COG0628	permease
GNE09_21135	COG0778	Nitroreductase
GNE09_21140	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
GNE09_21145	COG1959	2 iron, 2 sulfur cluster binding
GNE09_21150	COG0583	DNA-binding transcription factor activity
GNE09_21155	COG0697	spore germination
GNE09_21160	COG4549	nuclear export factor GLE1
GNE09_21165	COG2372	response to copper ion
GNE09_21165	COG1276	copper resistance
GNE09_21175	COG1114	Component of the transport system for branched-chain amino acids
GNE09_21205	COG2132	Multicopper oxidase
GNE09_21215	COG0006	proline dipeptidase activity
GNE09_21225	COG4846	Membrane protein involved in cytochrome C biogenesis
GNE09_21260	COG0295	cytidine deaminase activity
GNE09_21265	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
GNE09_21270	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
GNE09_21280	COG2390	Transcriptional regulator
GNE09_21285	COG1309	transcriptional regulator
GNE09_21300	COG0456	acetyltransferase
GNE09_21335	COG0531	amino acid
GNE09_21355	COG1914	H( )-stimulated, divalent metal cation uptake system
GNE09_21375	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
GNE09_21400	COG0427	acetyl-CoA hydrolase
GNE09_21405	COG3279	Response regulator of the LytR AlgR family
GNE09_21420	COG3384	dioxygenase
GNE09_21450	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
GNE09_21475	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
GNE09_21485	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
GNE09_21505	COG2323	membrane
GNE09_21510	COG5566	PFAM Mor transcription activator
GNE09_21520	COG0733	neurotransmitter:sodium symporter activity
GNE09_21540	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
GNE09_21550	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
GNE09_21560	COG0477	Major facilitator Superfamily
GNE09_21570	COG1695	Transcriptional regulator
GNE09_21625	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
GNE09_21630	COG0784	Response regulator, receiver
GNE09_21635	COG4191	Histidine kinase
GNE09_21640	COG0281	malic enzyme
GNE09_21645	COG1027	Aspartate ammonia-lyase
GNE09_21655	COG0528	UMP kinase activity
GNE09_21660	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
GNE09_21675	COG1131	(ABC) transporter
GNE09_21710	COG2733	membrane
GNE09_21730	COG0457	Tetratricopeptide repeat
GNE09_21740	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
GNE09_21745	COG0785	Cytochrome C biogenesis protein
GNE09_21765	COG3340	Belongs to the peptidase S51 family
GNE09_21770	COG0534	Mate efflux family protein
GNE09_21800	COG0789	Transcriptional regulator
GNE09_21805	COG1757	Na H antiporter
GNE09_21820	COG0701	Predicted permease
GNE09_21865	COG0367	asparagine synthase
GNE09_21875	COG1846	Transcriptional regulator
GNE09_21895	COG0406	alpha-ribazole phosphatase activity
GNE09_21935	COG1177	transmembrane transport
GNE09_21945	COG3842	ATPase activity
GNE09_21975	COG1215	transferase activity, transferring glycosyl groups
GNE09_21980	COG2329	Antibiotic biosynthesis monooxygenase
GNE09_22010	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
GNE09_22020	COG4786	Flagellar basal body rod
GNE09_22025	COG1419	protein localization to endoplasmic reticulum
GNE09_22030	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
GNE09_22035	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
GNE09_22045	COG1987	bacterial-type flagellum assembly
GNE09_22060	COG1776	CheC inhibitor of MCP methylation
GNE09_22060	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
GNE09_22065	COG1868	FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
GNE09_22075	COG0741	lytic transglycosylase activity
GNE09_22080	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
GNE09_22085	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
GNE09_22095	COG0835	chemotaxis
GNE09_22095	COG0784	Response regulator, receiver
GNE09_22110	COG1749	Flagellar hook protein flgE
GNE09_22130	COG1157	protein secretion by the type III secretion system
GNE09_22140	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
GNE09_22145	COG1766	The M ring may be actively involved in energy transduction
GNE09_22150	COG1677	Flagellar hook-basal body complex protein FliE
GNE09_22155	COG1558	bacterial-type flagellum-dependent cell motility
GNE09_22160	COG1815	bacterial-type flagellum-dependent cell motility
GNE09_22180	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
GNE09_22185	COG1256	bacterial-type flagellum assembly
GNE09_22205	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
GNE09_22220	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
GNE09_22220	COG1776	CheC inhibitor of MCP methylation
GNE09_22225	COG0643	Histidine kinase
GNE09_22225	COG2198	Histidine kinase
GNE09_22230	COG2201	protein-glutamate methylesterase activity
GNE09_22235	COG1360	Flagellar Motor Protein
GNE09_22240	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
GNE09_22250	COG1923	regulation of RNA biosynthetic process
GNE09_22285	COG1434	Gram-negative-bacterium-type cell wall biogenesis
GNE09_22290	COG2323	membrane
GNE09_22300	COG0789	Transcriptional regulator
GNE09_22300	COG4978	Transcriptional regulator
GNE09_22305	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
GNE09_22310	COG0475	glutathione-regulated potassium exporter activity
GNE09_22320	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
GNE09_22325	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
GNE09_22345	COG1280	lysine exporter protein (LysE YggA)
GNE09_22350	COG3403	YqcI/YcgG family
GNE09_22385	COG0328	RNA-DNA hybrid ribonuclease activity
GNE09_22405	COG0454	-acetyltransferase
GNE09_22420	COG0438	transferase activity, transferring glycosyl groups
GNE09_22425	COG1215	transferase activity, transferring glycosyl groups
GNE09_22465	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
GNE09_22480	COG0754	glutathionylspermidine amidase activity
GNE09_22515	COG0456	acetyltransferase
GNE09_22530	COG2311	Membrane
GNE09_22535	COG2233	PERMEase
GNE09_22550	COG3173	Aminoglycoside phosphotransferase
GNE09_22560	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
GNE09_22565	COG1199	ATP-dependent helicase activity
GNE09_22575	COG0116	Belongs to the methyltransferase superfamily
GNE09_22630	COG4499	WXG100 protein secretion system (Wss), protein YukC
GNE09_22630	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
GNE09_22640	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
GNE09_22645	COG3935	DnaD domain protein
GNE09_22720	COG1694	Mazg nucleotide pyrophosphohydrolase
GNE09_22725	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
GNE09_22735	COG2738	Putative neutral zinc metallopeptidase
GNE09_22750	COG4347	Protein of unknown function (DUF1405)
GNE09_22755	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
GNE09_22755	COG2010	Cytochrome c
GNE09_22760	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
GNE09_22780	COG0457	Tetratricopeptide repeat
GNE09_22805	COG0142	geranyltranstransferase activity
GNE09_22815	COG0142	geranyltranstransferase activity
GNE09_22830	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
GNE09_22895	COG0252	asparaginase activity
GNE09_22900	COG0492	ferredoxin-NADP+ reductase activity
GNE09_22920	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
GNE09_22930	COG0789	Transcriptional regulator
GNE09_22935	COG1408	metallophosphoesterase
GNE09_22950	COG0514	ATP-dependent DNA helicase (RecQ)
GNE09_22960	COG1141	Ferredoxin
GNE09_22965	COG3601	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
GNE09_22980	COG2096	Adenosyltransferase
GNE09_22985	COG5002	protein histidine kinase activity
GNE09_22990	COG0745	RESPONSE REGULATOR receiver
GNE09_22995	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
GNE09_23000	COG1333	cytochrome c biogenesis protein
GNE09_23010	COG1187	pseudouridine synthase activity
GNE09_23015	COG0700	Nucleoside recognition
GNE09_23020	COG2715	membrane protein required for spore maturation
GNE09_23025	COG1686	Belongs to the peptidase S11 family
GNE09_23045	COG0392	lysyltransferase activity
GNE09_23045	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
GNE09_23065	COG0582	viral genome integration into host DNA
GNE09_23075	COG1801	Protein of unknown function DUF72
GNE09_23080	COG3852	Histidine kinase
GNE09_23095	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
GNE09_23100	COG1392	Phosphate transport regulator
GNE09_23105	COG0306	phosphate transporter
GNE09_23110	COG0730	response to heat
GNE09_23160	COG1114	Component of the transport system for branched-chain amino acids
GNE09_23170	COG2197	response regulator
GNE09_23175	COG4585	Histidine kinase
GNE09_23180	COG4758	membrane
GNE09_23195	COG1757	Na H antiporter
GNE09_23215	COG0733	neurotransmitter:sodium symporter activity
GNE09_23220	COG1648	precorrin-2 dehydrogenase activity
GNE09_23240	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
GNE09_23245	COG0529	Catalyzes the synthesis of activated sulfate
GNE09_23265	COG0019	diaminopimelate decarboxylase activity
GNE09_23275	COG1368	sulfuric ester hydrolase activity
GNE09_23280	COG1183	phosphatidylcholine synthase activity
GNE09_23295	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
GNE09_23370	COG0440	acetolactate synthase activity
GNE09_23375	COG0028	Belongs to the TPP enzyme family
GNE09_23380	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
GNE09_23400	COG3874	Sporulation protein YtfJ
GNE09_23405	COG4709	membrane
GNE09_23410	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
GNE09_23415	COG1301	dicarboxylic acid transport
GNE09_23425	COG1846	Transcriptional regulator
GNE09_23470	COG0716	FMN binding
GNE09_23490	COG1696	Membrane protein involved in D-alanine export
GNE09_23500	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
GNE09_23505	COG2070	2-Nitropropane dioxygenase
GNE09_23510	COG1619	proteins homologs of microcin C7 resistance protein MccF
GNE09_23520	COG1335	isochorismatase
GNE09_23530	COG1522	sequence-specific DNA binding
GNE09_23545	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
GNE09_23550	COG1131	(ABC) transporter
GNE09_23560	COG1131	(ABC) transporter
GNE09_23565	COG1725	Transcriptional regulator
GNE09_23570	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
GNE09_23575	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
GNE09_23580	COG1780	Probably involved in ribonucleotide reductase function
GNE09_23605	COG4873	Protein conserved in bacteria
GNE09_23620	COG0720	synthase
GNE09_23630	COG5002	protein histidine kinase activity
GNE09_23635	COG2318	DinB family
GNE09_23645	COG1846	Transcriptional regulator
GNE09_23650	COG3852	Histidine kinase
GNE09_23660	COG2861	carbohydrate metabolic process
GNE09_23670	COG0235	Class ii aldolase
GNE09_23680	COG1349	DNA-binding transcription factor activity
GNE09_23705	COG3842	ATPase activity
GNE09_23710	COG1840	ABC-type Fe3 transport system, periplasmic component
GNE09_23720	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
GNE09_23730	COG3243	poly(R)-hydroxyalkanoic acid synthase
GNE09_23735	COG1028	Short-chain dehydrogenase reductase Sdr
GNE09_23755	COG2030	dehydratase
GNE09_23765	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
GNE09_23770	COG0861	Integral membrane protein TerC family
GNE09_23775	COG2116	formate transmembrane transporter activity
GNE09_23785	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
GNE09_23805	COG2186	Transcriptional regulator
GNE09_23810	COG5002	protein histidine kinase activity
GNE09_23815	COG0745	RESPONSE REGULATOR receiver
GNE09_23825	COG3835	regulator
GNE09_23830	COG0277	FAD linked oxidase domain protein
GNE09_23835	COG0247	lactate metabolic process
GNE09_23840	COG2340	Cysteine-rich secretory protein family
GNE09_23850	COG0564	pseudouridine synthase activity
GNE09_23860	COG2409	Drug exporters of the RND superfamily
GNE09_23865	COG0671	phosphoesterase, PA-phosphatase related
GNE09_23870	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
GNE09_23875	COG1177	transmembrane transport
GNE09_23880	COG1176	ABC-type spermidine putrescine transport system, permease component I
GNE09_23890	COG1012	belongs to the aldehyde dehydrogenase family
GNE09_23925	COG0681	Belongs to the peptidase S26 family
GNE09_23930	COG1686	Belongs to the peptidase S11 family
GNE09_23940	COG2226	methyltransferase
GNE09_23980	COG1476	TRANSCRIPTIONal
GNE09_23990	COG0508	dehydrogenase complex catalyzes the overall conversion of
GNE09_24045	COG5634	Uncharacterized conserved protein (DUF2278)
GNE09_24055	COG1620	l-lactate permease
GNE09_24090	COG0512	Glutamine amidotransferase of anthranilate synthase
GNE09_24090	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
GNE09_24100	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
GNE09_24105	COG5492	domain, Protein
GNE09_24120	COG2382	esterase
GNE09_24130	COG2153	protein acetylation
GNE09_24175	COG1091	dTDP-4-dehydrorhamnose reductase activity
GNE09_24190	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
GNE09_24210	COG0457	Tetratricopeptide repeat
GNE09_24210	COG0463	Glycosyl transferase, family 2
GNE09_24230	COG1216	Glycosyl transferase, family 2
GNE09_24235	COG0772	Belongs to the SEDS family
GNE09_24250	COG0564	pseudouridine synthase activity
GNE09_24260	COG2357	RelA SpoT domain protein
GNE09_24270	COG4116	CYTH
GNE09_24275	COG2346	COG2346, Truncated hemoglobins
GNE09_24285	COG1164	Oligoendopeptidase f
GNE09_24295	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
GNE09_24305	COG0861	Integral membrane protein TerC family
GNE09_24310	COG1393	Belongs to the ArsC family
GNE09_24320	COG4166	transmembrane transport
GNE09_24325	COG0534	Mate efflux family protein
GNE09_24330	COG4608	Belongs to the ABC transporter superfamily
GNE09_24335	COG0444	Belongs to the ABC transporter superfamily
GNE09_24340	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
GNE09_24345	COG0601	transmembrane transport
GNE09_24350	COG4166	transmembrane transport
GNE09_24360	COG0180	Tryptophanyl-tRNA synthetase
GNE09_24370	COG5504	Zn-dependent protease
GNE09_24375	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
GNE09_24380	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
GNE09_24395	COG2267	carboxylic ester hydrolase activity
GNE09_24415	COG0561	phosphatase activity
GNE09_24430	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
GNE09_24475	COG2996	Protein conserved in bacteria
GNE09_24495	COG0004	ammonium transporteR
GNE09_24500	COG0753	catalase activity
GNE09_24510	COG0367	asparagine synthase
GNE09_24535	COG0179	Fumarylacetoacetate (FAA) hydrolase
GNE09_24595	COG0398	Pfam SNARE associated Golgi protein
GNE09_24600	COG4903	ComK protein
GNE09_24615	COG1278	Cold shock
GNE09_24630	COG2224	Isocitrate lyase
GNE09_24635	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
GNE09_24645	COG3693	PFAM glycoside hydrolase, family 10
GNE09_24655	COG0840	transmembrane signaling receptor activity
GNE09_24660	COG0501	Belongs to the peptidase M48B family
GNE09_24680	COG0745	RESPONSE REGULATOR receiver
GNE09_24685	COG2205	protein histidine kinase activity
GNE09_24695	COG3708	Transcriptional regulator
GNE09_24695	COG2207	Transcriptional regulator
GNE09_24700	COG1595	DNA-templated transcription, initiation
GNE09_24715	COG1078	dGTPase activity
GNE09_24720	COG1408	metallophosphoesterase
GNE09_24725	COG1073	alpha beta
GNE09_24780	COG0318	PFAM AMP-dependent synthetase and ligase
GNE09_24790	COG0095	Lipoate-protein ligase
GNE09_24795	COG1234	tRNA 3'-trailer cleavage
GNE09_24830	COG1511	domain protein
GNE09_24835	COG1309	transcriptional regulator
GNE09_24875	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
GNE09_24880	COG2329	Antibiotic biosynthesis monooxygenase
GNE09_24890	COG3402	PFAM membrane-flanked domain
GNE09_24895	COG0697	spore germination
GNE09_24930	COG3428	Bacterial PH domain
GNE09_24935	COG3402	PFAM membrane-flanked domain
GNE09_24940	COG1309	transcriptional regulator
GNE09_24955	COG4473	ABC transporter
GNE09_24960	COG1131	(ABC) transporter
GNE09_24965	COG0537	adenosine 5'-monophosphoramidase activity
GNE09_24970	COG4980	gas vesicle protein
GNE09_24995	COG3973	AAA domain
GNE09_25020	COG1695	Transcriptional regulator
GNE09_25025	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
GNE09_25035	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
GNE09_25040	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
GNE09_25045	COG3620	sequence-specific DNA binding
GNE09_25050	COG2140	Oxalate decarboxylase
GNE09_25065	COG2267	carboxylic ester hydrolase activity
GNE09_25075	COG0457	Tetratricopeptide repeat
GNE09_25080	COG0346	lactoylglutathione lyase activity
GNE09_25085	COG0346	lactoylglutathione lyase activity
GNE09_25090	COG1280	lysine exporter protein (LysE YggA)
GNE09_25105	COG4717	serine-type aminopeptidase activity
GNE09_25110	COG0420	3'-5' exonuclease activity
GNE09_25130	COG3049	Linear amide C-N hydrolases, choloylglycine hydrolase family
GNE09_25175	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
GNE09_25180	COG2208	phosphoserine phosphatase activity
GNE09_25190	COG1191	sigma factor activity
GNE09_25215	COG3237	CsbD-like
GNE09_25260	COG2373	Large extracellular alpha-helical protein
GNE09_25285	COG1959	2 iron, 2 sulfur cluster binding
GNE09_25305	COG2376	Dihydroxyacetone kinase
GNE09_25315	COG0640	Transcriptional regulator
GNE09_25320	COG2814	Major facilitator Superfamily
GNE09_25330	COG1183	phosphatidylcholine synthase activity
GNE09_25395	COG1073	alpha beta
GNE09_25430	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
GNE09_25450	COG0477	Major facilitator Superfamily
GNE09_25475	COG0305	Participates in initiation and elongation during chromosome replication
GNE09_25520	COG0494	nUDIX hydrolase
GNE09_25525	COG3181	Tripartite tricarboxylate transporter family receptor
GNE09_25530	COG4565	transcriptional regulatory protein
GNE09_25540	COG0477	Major facilitator Superfamily
GNE09_25700	COG2814	Major facilitator Superfamily
GNE09_25705	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
GNE09_25720	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
GNE09_25740	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
GNE09_25750	COG4608	Belongs to the ABC transporter superfamily
GNE09_25755	COG0444	Belongs to the ABC transporter superfamily
GNE09_25760	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
GNE09_25765	COG0601	transmembrane transport
GNE09_25800	COG1363	Peptidase, m42
GNE09_25820	COG1024	Enoyl-CoA hydratase
GNE09_25840	COG2244	polysaccharide biosynthetic process
GNE09_25845	COG0659	secondary active sulfate transmembrane transporter activity
GNE09_25855	COG0318	PFAM AMP-dependent synthetase and ligase
GNE09_25860	COG0635	Involved in the biosynthesis of porphyrin-containing compound
GNE09_25865	COG5632	N-Acetylmuramoyl-L-alanine amidase
GNE09_25865	COG3409	Peptidoglycan-binding domain 1 protein
GNE09_25875	COG0561	phosphatase activity
GNE09_25885	COG3527	Alpha-acetolactate decarboxylase
GNE09_25890	COG0028	Belongs to the TPP enzyme family
GNE09_25920	COG0189	ligase activity
GNE09_25935	COG1126	abc transporter atp-binding protein
GNE09_25940	COG0765	amino acid transport
GNE09_25945	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
GNE09_25950	COG1132	(ABC) transporter
GNE09_25955	COG1132	(ABC) transporter
GNE09_25960	COG1012	belongs to the aldehyde dehydrogenase family
GNE09_25965	COG0531	amino acid
GNE09_25975	COG0753	catalase activity
GNE09_25975	COG0693	protein deglycase activity
GNE09_25980	COG0693	protein deglycase activity
GNE09_26000	COG1733	regulation of RNA biosynthetic process
GNE09_26010	COG1309	transcriptional regulator
GNE09_26020	COG2076	Multidrug Resistance protein
GNE09_26030	COG1028	Short-chain dehydrogenase reductase Sdr
GNE09_26040	COG1522	sequence-specific DNA binding
GNE09_26060	COG2259	Doxx family
GNE09_26070	COG1263	PTS System
GNE09_26070	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
GNE09_26080	COG1737	Transcriptional regulator
GNE09_26090	COG0475	glutathione-regulated potassium exporter activity
GNE09_26125	COG0586	Pfam SNARE associated Golgi protein
GNE09_26160	COG3546	catalase activity
GNE09_26165	COG1114	Component of the transport system for branched-chain amino acids
GNE09_26180	COG5522	Integral membrane protein (intg_mem_TP0381)
GNE09_26195	COG0577	efflux transmembrane transporter activity
GNE09_26200	COG1388	LysM domain
GNE09_26200	COG3584	3D domain protein
GNE09_26225	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
GNE09_26230	COG1447	Phosphotransferase system cellobiose-specific component IIA
GNE09_26235	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
GNE09_26235	COG3711	transcriptional antiterminator
GNE09_26250	COG1283	sodium-dependent phosphate transmembrane transporter activity
GNE09_26255	COG0604	alcohol dehydrogenase
GNE09_26260	COG1316	TRANSCRIPTIONal
GNE09_26270	COG0730	response to heat
GNE09_26275	COG2210	Belongs to the sulfur carrier protein TusA family
GNE09_26285	COG0425	Belongs to the sulfur carrier protein TusA family
GNE09_26285	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
GNE09_26290	COG0425	Belongs to the sulfur carrier protein TusA family
GNE09_26295	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
GNE09_26295	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
GNE09_26300	COG0425	Belongs to the sulfur carrier protein TusA family
GNE09_26300	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
GNE09_26305	COG1937	Protein conserved in bacteria
GNE09_26310	COG0446	pyridine nucleotide-disulphide oxidoreductase
GNE09_26325	COG1414	Transcriptional regulator
GNE09_26365	COG2719	SpoVR family
GNE09_26370	COG0778	Nitroreductase
GNE09_26430	COG1028	Short-chain dehydrogenase reductase Sdr
GNE09_26435	COG2252	PERMEase
GNE09_26445	COG1136	(ABC) transporter
GNE09_26470	COG1846	Transcriptional regulator
GNE09_26475	COG2814	Major facilitator Superfamily
GNE09_26480	COG2205	protein histidine kinase activity
GNE09_26525	COG1136	(ABC) transporter
GNE09_26545	COG0351	phosphomethylpyrimidine kinase
GNE09_26550	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
GNE09_26560	COG2104	thiamine diphosphate biosynthetic process
GNE09_26565	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
GNE09_26570	COG0352	thiamine-phosphate diphosphorylase activity
GNE09_26575	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
GNE09_26580	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
GNE09_26585	COG1116	anion transmembrane transporter activity
GNE09_26590	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
GNE09_26610	COG2905	signal-transduction protein containing cAMP-binding and CBS domains
GNE09_26730	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
GNE09_26740	COG0581	inorganic phosphate transmembrane transporter activity
GNE09_26745	COG0573	inorganic phosphate transmembrane transporter activity
GNE09_26750	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
GNE09_26755	COG1918	ferrous iron import across plasma membrane
GNE09_26755	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
GNE09_26760	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
GNE09_26765	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
GNE09_26775	COG0531	amino acid
GNE09_26780	COG0697	spore germination
GNE09_26785	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
GNE09_26800	COG4990	cell redox homeostasis
GNE09_26805	COG0833	amino acid
GNE09_26810	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
GNE09_26815	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
GNE09_26830	COG0569	domain protein
GNE09_26830	COG0475	glutathione-regulated potassium exporter activity
GNE09_26840	COG2153	protein acetylation
GNE09_26855	COG2252	PERMEase
GNE09_26860	COG1113	amino acid transport
GNE09_26875	COG1114	Component of the transport system for branched-chain amino acids
GNE09_26880	COG3104	oligopeptide transport
GNE09_26900	COG1476	TRANSCRIPTIONal
GNE09_26905	COG3583	domain protein
GNE09_26905	COG3584	3D domain protein
GNE09_26910	COG0840	transmembrane signaling receptor activity
GNE09_27100	COG2311	Membrane
GNE09_27110	COG2002	toxin-antitoxin pair type II binding
GNE09_27140	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
GNE09_27155	COG0776	regulation of translation
GNE09_27160	COG0076	glutamate decarboxylase activity
GNE09_27175	COG1725	Transcriptional regulator
GNE09_27180	COG1131	(ABC) transporter
GNE09_27200	COG2312	Erythromycin esterase
GNE09_27210	COG0745	RESPONSE REGULATOR receiver
GNE09_27215	COG2205	protein histidine kinase activity
GNE09_27220	COG1136	(ABC) transporter
GNE09_27225	COG0577	efflux transmembrane transporter activity
GNE09_27250	COG0456	acetyltransferase
GNE09_27260	COG2076	Multidrug Resistance protein
GNE09_27265	COG2076	Multidrug Resistance protein
GNE09_27275	COG5002	protein histidine kinase activity
GNE09_27280	COG1136	(ABC) transporter
GNE09_27300	COG1595	DNA-templated transcription, initiation
GNE09_27325	COG2040	homocysteine
GNE09_27330	COG0833	amino acid
GNE09_27350	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
GNE09_27350	COG4499	WXG100 protein secretion system (Wss), protein YukC
GNE09_27370	COG1404	Belongs to the peptidase S8 family
GNE09_27445	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
GNE09_27450	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
GNE09_27475	COG1686	Belongs to the peptidase S11 family
GNE09_27485	COG0697	spore germination
GNE09_27490	COG0726	polysaccharide deacetylase
GNE09_27505	COG1131	(ABC) transporter
GNE09_27545	COG2184	nucleotidyltransferase activity
GNE09_27550	COG1760	l-serine dehydratase
GNE09_27555	COG1760	l-serine dehydratase
GNE09_27560	COG0814	amino acid
GNE09_27570	COG0840	transmembrane signaling receptor activity
GNE09_27585	COG1923	regulation of RNA biosynthetic process
GNE09_27605	COG1533	DNA photolyase activity
GNE09_27620	COG3049	Linear amide C-N hydrolases, choloylglycine hydrolase family
GNE09_27625	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
GNE09_27630	COG0772	Belongs to the SEDS family
GNE09_27640	COG2239	Acts as a magnesium transporter
GNE09_27655	COG1876	peptidase activity
GNE09_27660	COG3409	Peptidoglycan-binding domain 1 protein
GNE09_27660	COG0860	N-Acetylmuramoyl-L-alanine amidase
GNE09_27705	COG4974	Belongs to the 'phage' integrase family
GNE09_27730	COG2259	Doxx family
GNE09_27760	COG2814	Major facilitator Superfamily
GNE09_27780	COG1136	(ABC) transporter
GNE09_27790	COG0745	RESPONSE REGULATOR receiver
GNE09_27795	COG3850	Histidine kinase
GNE09_27795	COG5002	protein histidine kinase activity
GNE09_27800	COG2205	protein histidine kinase activity
GNE09_27805	COG0745	RESPONSE REGULATOR receiver
GNE09_27810	COG0577	efflux transmembrane transporter activity
GNE09_27815	COG1136	(ABC) transporter
GNE09_27850	COG0457	Tetratricopeptide repeat
GNE09_27915	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
GNE09_27945	COG3409	Peptidoglycan-binding domain 1 protein
GNE09_27945	COG5632	N-Acetylmuramoyl-L-alanine amidase
GNE09_27980	COG1132	(ABC) transporter
GNE09_28000	COG1475	DNA binding
GNE09_28050	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
GNE09_28070	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
GNE09_28075	COG1250	3-hydroxyacyl-CoA dehydrogenase
GNE09_28090	COG1960	acyl-CoA dehydrogenase activity
GNE09_28110	COG0318	PFAM AMP-dependent synthetase and ligase
GNE09_28110	COG1028	Short-chain dehydrogenase reductase Sdr
GNE09_28110	COG3321	synthase
GNE09_28110	COG1028	Short-chain dehydrogenase reductase Sdr
GNE09_28110	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
GNE09_28110	COG0300	oxidoreductase activity
GNE09_28110	COG0300	oxidoreductase activity
GNE09_28110	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
GNE09_28110	COG3321	synthase
GNE09_28110	COG0318	PFAM AMP-dependent synthetase and ligase
GNE09_28155	COG0667	Aldo Keto reductase
GNE09_28170	COG1028	Short-chain dehydrogenase reductase Sdr
GNE09_28180	COG2089	acid synthase
GNE09_28185	COG1028	Short-chain dehydrogenase reductase Sdr
GNE09_28190	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
GNE09_28195	COG3391	amine dehydrogenase activity
GNE09_28235	COG1396	sequence-specific DNA binding
GNE09_28240	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
GNE09_28245	COG0210	DNA helicase
GNE09_28330	COG0457	Tetratricopeptide repeat
GNE09_28345	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
GNE09_28360	COG2801	Transposase and inactivated derivatives
GNE09_28375	COG0457	Tetratricopeptide repeat
GNE09_28385	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
GNE09_28405	COG1404	Belongs to the peptidase S8 family
GNE09_28415	COG4585	Histidine kinase
GNE09_28430	COG1309	transcriptional regulator
GNE09_28490	COG0367	asparagine synthase
GNE09_28495	COG1309	transcriptional regulator
GNE09_28590	COG5632	N-Acetylmuramoyl-L-alanine amidase
GNE09_28605	COG5632	N-Acetylmuramoyl-L-alanine amidase
GNE09_28605	COG3409	Peptidoglycan-binding domain 1 protein
GNE09_28605	COG1388	LysM domain
GNE09_28610	COG0739	heme binding
GNE09_28645	COG5549	protein import
GNE09_28645	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
GNE09_28680	COG0542	response to heat
GNE09_28685	COG0741	lytic transglycosylase activity
GNE09_28685	COG1196	nuclear chromosome segregation
GNE09_28685	COG0739	heme binding
GNE09_28695	COG3583	domain protein
GNE09_28695	COG3584	3D domain protein
GNE09_28705	COG0457	Tetratricopeptide repeat
GNE09_28785	COG1136	(ABC) transporter
GNE09_29070	COG2814	Major facilitator Superfamily
GNE09_29145	COG4974	Belongs to the 'phage' integrase family
GNE09_29175	COG0586	Pfam SNARE associated Golgi protein
GNE09_29205	COG3615	Tellurite resistance protein tehB
GNE09_29205	COG0500	methyltransferase
GNE09_29245	COG0745	RESPONSE REGULATOR receiver
GNE09_29280	COG2801	Transposase and inactivated derivatives
GNE09_29295	COG2801	Transposase and inactivated derivatives
GNE09_29305	COG0745	RESPONSE REGULATOR receiver
GNE09_29310	COG2205	protein histidine kinase activity
GNE09_29315	COG1136	(ABC) transporter
GNE09_29320	COG0577	efflux transmembrane transporter activity
GNE09_29400	COG0697	spore germination
GNE09_29405	COG0583	DNA-binding transcription factor activity
GNE09_29410	COG2720	vancomycin resistance protein
GNE09_29415	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
GNE09_29440	COG0789	Transcriptional regulator
GNE09_29465	COG1028	Short-chain dehydrogenase reductase Sdr
GNE09_29470	COG0789	Transcriptional regulator
GNE09_29475	COG4974	Belongs to the 'phage' integrase family
GNE09_29565	COG1064	alcohol dehydrogenase
GNE09_29570	COG3961	Belongs to the TPP enzyme family
GNE09_29590	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
GNE09_29600	COG1696	Membrane protein involved in D-alanine export
GNE09_29615	COG0726	polysaccharide deacetylase
GNE09_29705	COG0457	Tetratricopeptide repeat
GNE09_29715	COG0457	Tetratricopeptide repeat
GNE09_29720	COG1923	regulation of RNA biosynthetic process
GNE09_29830	COG3344	reverse transcriptase
GNE09_29870	COG1343	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
GNE09_29935	COG2318	DinB family
GNE09_30015	COG2329	Antibiotic biosynthesis monooxygenase