locus-tag class description CSW12_00020 PF00731 AIR carboxylase CSW12_00025 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain CSW12_00025 PF02222 ATP-grasp domain CSW12_00030 PF10397 Adenylosuccinate lyase C-terminus CSW12_00030 PF00206 Lyase CSW12_00035 PF01259 SAICAR synthetase CSW12_00040 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase CSW12_00050 PF00586 AIR synthase related protein, N-terminal domain CSW12_00050 PF02769 AIR synthase related protein, C-terminal domain CSW12_00050 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CSW12_00055 PF00156 Phosphoribosyl transferase domain CSW12_00060 PF02769 AIR synthase related protein, C-terminal domain CSW12_00060 PF00586 AIR synthase related protein, N-terminal domain CSW12_00065 PF00551 Formyl transferase CSW12_00070 PF01808 AICARFT/IMPCHase bienzyme CSW12_00070 PF02142 MGS-like domain CSW12_00075 PF02844 Phosphoribosylglycinamide synthetase, N domain CSW12_00075 PF02843 Phosphoribosylglycinamide synthetase, C domain CSW12_00075 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CSW12_00085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSW12_00085 PF03466 LysR substrate binding domain CSW12_00105 PF01884 PcrB family CSW12_00110 PF13361 UvrD-like helicase C-terminal domain CSW12_00110 PF00580 UvrD/REP helicase N-terminal domain CSW12_00115 PF03120 NAD-dependent DNA ligase OB-fold domain CSW12_00115 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CSW12_00115 PF00533 BRCA1 C Terminus (BRCT) domain CSW12_00115 PF01653 NAD-dependent DNA ligase adenylation domain CSW12_00115 PF12826 Helix-hairpin-helix motif CSW12_00120 PF07537 CamS sex pheromone cAM373 precursor CSW12_00125 PF01925 Sulfite exporter TauE/SafE CSW12_00130 PF00171 Aldehyde dehydrogenase family CSW12_00140 PF00857 Isochorismatase family CSW12_00150 PF09383 NIL domain CSW12_00150 PF00005 ABC transporter CSW12_00155 PF00528 Binding-protein-dependent transport system inner membrane component CSW12_00160 PF03180 NLPA lipoprotein CSW12_00180 PF01381 Helix-turn-helix CSW12_00210 PF01695 IstB-like ATP binding protein CSW12_00230 PF10548 P22AR C-terminal domain CSW12_00230 PF02498 BRO family, N-terminal domain CSW12_00250 PF00589 Phage integrase family CSW12_00370 PF02371 Transposase IS116/IS110/IS902 family CSW12_00370 PF01548 Transposase CSW12_00395 PF08239 Bacterial SH3 domain CSW12_00395 PF01520 N-acetylmuramoyl-L-alanine amidase CSW12_00425 PF02686 Glu-tRNAGln amidotransferase C subunit CSW12_00430 PF01425 Amidase CSW12_00435 PF02934 GatB/GatE catalytic domain CSW12_00435 PF02637 GatB domain CSW12_00440 PF00781 Diacylglycerol kinase catalytic domain CSW12_00445 PF13419 Haloacid dehalogenase-like hydrolase CSW12_00450 PF00202 Aminotransferase class-III CSW12_00455 PF00158 Sigma-54 interaction domain CSW12_00460 PF00171 Aldehyde dehydrogenase family CSW12_00465 PF00893 Small Multidrug Resistance protein CSW12_00475 PF02073 Thermophilic metalloprotease (M29) CSW12_00490 PF01773 Na+ dependent nucleoside transporter N-terminus CSW12_00490 PF07662 Na+ dependent nucleoside transporter C-terminus CSW12_00490 PF07670 Nucleoside recognition CSW12_00495 PF13847 Methyltransferase domain CSW12_00495 PF05958 tRNA (Uracil-5-)-methyltransferase CSW12_00495 PF01938 TRAM domain CSW12_00500 PF01207 Dihydrouridine synthase (Dus) CSW12_00515 PF07308 Protein of unknown function (DUF1456) CSW12_00530 PF13378 Enolase C-terminal domain-like CSW12_00530 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CSW12_00545 PF07687 Peptidase dimerisation domain CSW12_00545 PF01546 Peptidase family M20/M25/M40 CSW12_00555 PF07992 Pyridine nucleotide-disulphide oxidoreductase CSW12_00555 PF13192 Thioredoxin domain CSW12_00560 PF00578 AhpC/TSA family CSW12_00565 PF01636 Phosphotransferase enzyme family CSW12_00575 PF00596 Class II Aldolase and Adducin N-terminal domain CSW12_00580 PF01032 FecCD transport family CSW12_00585 PF01032 FecCD transport family CSW12_00590 PF01497 Periplasmic binding protein CSW12_00615 PF12728 Helix-turn-helix domain CSW12_00640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSW12_00640 PF00989 PAS fold CSW12_00640 PF13188 PAS domain CSW12_00640 PF13426 PAS domain CSW12_00640 PF00512 His Kinase A (phospho-acceptor) domain CSW12_00660 PF10127 RNA repair pathway DNA polymerase beta family CSW12_00665 PF07690 Major Facilitator Superfamily CSW12_00670 PF00355 Rieske [2Fe-2S] domain CSW12_00670 PF01266 FAD dependent oxidoreductase CSW12_00680 PF00528 Binding-protein-dependent transport system inner membrane component CSW12_00685 PF00497 Bacterial extracellular solute-binding proteins, family 3 CSW12_00690 PF00005 ABC transporter CSW12_00695 PF12729 Four helix bundle sensory module for signal transduction CSW12_00695 PF00672 HAMP domain CSW12_00695 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CSW12_00700 PF02863 Arginine repressor, C-terminal domain CSW12_00700 PF01316 Arginine repressor, DNA binding domain CSW12_00710 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CSW12_00710 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CSW12_00715 PF13520 Amino acid permease CSW12_00720 PF00696 Amino acid kinase family CSW12_00725 PF13545 Crp-like helix-turn-helix domain CSW12_00725 PF00027 Cyclic nucleotide-binding domain CSW12_00740 PF08031 Berberine and berberine like CSW12_00740 PF01565 FAD binding domain CSW12_00745 PF16657 Maltogenic Amylase, C-terminal domain CSW12_00745 PF00128 Alpha amylase, catalytic domain CSW12_00750 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CSW12_00750 PF00367 phosphotransferase system, EIIB CSW12_00750 PF02378 Phosphotransferase system, EIIC CSW12_00755 PF03372 Endonuclease/Exonuclease/phosphatase family CSW12_00760 PF01061 ABC-2 type transporter CSW12_00770 PF01751 Toprim domain CSW12_00770 PF01131 DNA topoisomerase CSW12_00775 PF02110 Hydroxyethylthiazole kinase family CSW12_00780 PF02581 Thiamine monophosphate synthase CSW12_00785 PF03605 Anaerobic c4-dicarboxylate membrane transporter CSW12_00790 PF00672 HAMP domain CSW12_00790 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CSW12_00795 PF00975 Thioesterase domain CSW12_00795 PF13193 AMP-binding enzyme C-terminal domain CSW12_00795 PF00668 Condensation domain CSW12_00795 PF00550 Phosphopantetheine attachment site CSW12_00795 PF00501 AMP-binding enzyme CSW12_00800 PF01910 Thiamine-binding protein CSW12_00805 PF00528 Binding-protein-dependent transport system inner membrane component CSW12_00815 PF00005 ABC transporter CSW12_00820 PF00005 ABC transporter CSW12_00820 PF12848 ABC transporter CSW12_00825 PF00041 Fibronectin type III domain CSW12_00825 PF00704 Glycosyl hydrolases family 18 CSW12_00855 PF08360 QacR-like protein, C-terminal region CSW12_00855 PF00440 Bacterial regulatory proteins, tetR family CSW12_00870 PF11700 Vacuole effluxer Atg22 like CSW12_00885 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CSW12_00885 PF03129 Anticodon binding domain CSW12_00885 PF09180 Prolyl-tRNA synthetase, C-terminal CSW12_00895 PF00480 ROK family CSW12_00900 PF02342 TerD domain CSW12_00905 PF02342 TerD domain CSW12_00910 PF02342 TerD domain CSW12_00915 PF03741 Integral membrane protein TerC family CSW12_00920 PF14266 Putative component of 'biosynthetic module' CSW12_00925 PF05816 Toxic anion resistance protein (TelA) CSW12_00930 PF00689 Cation transporting ATPase, C-terminus CSW12_00930 PF00690 Cation transporter/ATPase, N-terminus CSW12_00935 PF06569 Protein of unknown function (DUF1128) CSW12_00940 PF01451 Low molecular weight phosphotyrosine protein phosphatase CSW12_00950 PF03631 Virulence factor BrkB CSW12_00965 PF00892 EamA-like transporter family CSW12_00975 PF10502 Signal peptidase, peptidase S26 CSW12_00985 PF09335 SNARE associated Golgi protein CSW12_01000 PF16242 Pyridoxamine 5'-phosphate oxidase like CSW12_01010 PF14167 YfkD-like protein CSW12_01015 PF08756 YfkB-like domain CSW12_01015 PF04055 Radical SAM superfamily CSW12_01025 PF05683 Fumarase C-terminus CSW12_01025 PF05681 Fumarate hydratase (Fumerase) CSW12_01030 PF01522 Polysaccharide deacetylase CSW12_01035 PF00730 HhH-GPD superfamily base excision DNA repair protein CSW12_01040 PF05958 tRNA (Uracil-5-)-methyltransferase CSW12_01040 PF01938 TRAM domain CSW12_01045 PF01416 tRNA pseudouridine synthase CSW12_01055 PF00158 Sigma-54 interaction domain CSW12_01055 PF13426 PAS domain CSW12_01055 PF02954 Bacterial regulatory protein, Fis family CSW12_01065 PF00324 Amino acid permease CSW12_01075 PF07687 Peptidase dimerisation domain CSW12_01075 PF01546 Peptidase family M20/M25/M40 CSW12_01100 PF04960 Glutaminase CSW12_01110 PF02378 Phosphotransferase system, EIIC CSW12_01110 PF00367 phosphotransferase system, EIIB CSW12_01115 PF00144 Beta-lactamase CSW12_01130 PF00535 Glycosyl transferase family 2 CSW12_01135 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CSW12_01135 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CSW12_01135 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CSW12_01140 PF00551 Formyl transferase CSW12_01140 PF01370 NAD dependent epimerase/dehydratase family CSW12_01140 PF02911 Formyl transferase, C-terminal domain CSW12_01145 PF00535 Glycosyl transferase family 2 CSW12_01155 PF01228 Glycine radical CSW12_01155 PF02901 Pyruvate formate lyase-like CSW12_01160 PF04055 Radical SAM superfamily CSW12_01165 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase CSW12_01165 PF04101 Glycosyltransferase family 28 C-terminal domain CSW12_01180 PF01979 Amidohydrolase family CSW12_01185 PF01370 NAD dependent epimerase/dehydratase family CSW12_01185 PF08338 Domain of unknown function (DUF1731) CSW12_01190 PF02631 RecX family CSW12_01205 PF08176 Small acid-soluble spore protein K family CSW12_01210 PF14043 WVELL protein CSW12_01215 PF04307 LexA-binding, inner membrane-associated putative hydrolase CSW12_01220 PF00730 HhH-GPD superfamily base excision DNA repair protein CSW12_01220 PF14815 NUDIX domain CSW12_01230 PF04259 Small, acid-soluble spore protein, gamma-type CSW12_01235 PF14182 YgaB-like protein CSW12_01245 PF00664 ABC transporter transmembrane region CSW12_01245 PF00005 ABC transporter CSW12_01250 PF06081 Aromatic acid exporter family member 1 CSW12_01255 PF04898 Glutamate synthase central domain CSW12_01255 PF01645 Conserved region in glutamate synthase CSW12_01255 PF01493 GXGXG motif CSW12_01255 PF00310 Glutamine amidotransferases class-II CSW12_01260 PF00202 Aminotransferase class-III CSW12_01265 PF00005 ABC transporter CSW12_01280 PF07885 Ion channel CSW12_01285 PF00578 AhpC/TSA family CSW12_01290 PF01475 Ferric uptake regulator family CSW12_01300 PF11023 Zinc-ribbon containing domain CSW12_01405 PF01709 Transcriptional regulator CSW12_01410 PF13344 Haloacid dehalogenase-like hydrolase CSW12_01410 PF00293 NUDIX domain CSW12_01415 PF00912 Transglycosylase CSW12_01415 PF00905 Penicillin binding protein transpeptidase domain CSW12_01420 PF13462 Thioredoxin CSW12_01430 PF08331 Domain of unknown function (DUF1730) CSW12_01435 PF12671 Putative amidase domain CSW12_01440 PF00588 SpoU rRNA Methylase family CSW12_01445 PF00498 FHA domain CSW12_01445 PF00563 EAL domain CSW12_01445 PF00990 Diguanylate cyclase, GGDEF domain CSW12_01455 PF06798 PrkA serine protein kinase C-terminal domain CSW12_01455 PF08298 PrkA AAA domain CSW12_01465 PF04285 Protein of unknown function (DUF444) CSW12_01480 PF02028 BCCT, betaine/carnitine/choline family transporter CSW12_01485 PF08453 Peptidase family M9 N-terminal CSW12_01485 PF18496 Collagenase G catalytic helper subdomain CSW12_01485 PF01752 Collagenase CSW12_01495 PF15975 Flotillin CSW12_01495 PF01145 SPFH domain / Band 7 family CSW12_01500 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CSW12_01500 PF00672 HAMP domain CSW12_01500 PF02743 Cache domain CSW12_01505 PF17203 Single cache domain 3 CSW12_01505 PF00989 PAS fold CSW12_01505 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain CSW12_01505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSW12_01510 PF00072 Response regulator receiver domain CSW12_01510 PF12431 Transcriptional regulator CSW12_01515 PF03600 Citrate transporter CSW12_01540 PF04309 Glycerol-3-phosphate responsive antiterminator CSW12_01545 PF17912 MalK OB fold domain CSW12_01545 PF00005 ABC transporter CSW12_01550 PF00528 Binding-protein-dependent transport system inner membrane component CSW12_01555 PF00528 Binding-protein-dependent transport system inner membrane component CSW12_01560 PF13416 Bacterial extracellular solute-binding protein CSW12_01565 PF00149 Calcineurin-like phosphoesterase CSW12_01570 PF00486 Transcriptional regulatory protein, C terminal CSW12_01570 PF00072 Response regulator receiver domain CSW12_01575 PF00512 His Kinase A (phospho-acceptor) domain CSW12_01575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSW12_01585 PF13529 Peptidase_C39 like family CSW12_01590 PF00672 HAMP domain CSW12_01590 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CSW12_01590 PF02743 Cache domain CSW12_01595 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain CSW12_01595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSW12_01595 PF00989 PAS fold CSW12_01595 PF17203 Single cache domain 3 CSW12_01600 PF00072 Response regulator receiver domain CSW12_01605 PF03390 2-hydroxycarboxylate transporter family CSW12_01610 PF03949 Malic enzyme, NAD binding domain CSW12_01610 PF00390 Malic enzyme, N-terminal domain CSW12_01620 PF00892 EamA-like transporter family CSW12_01625 PF00155 Aminotransferase class I and II CSW12_01625 PF00392 Bacterial regulatory proteins, gntR family CSW12_01635 PF00989 PAS fold CSW12_01635 PF00672 HAMP domain CSW12_01635 PF18698 Histidine kinase sensor domain CSW12_01635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSW12_01635 PF00512 His Kinase A (phospho-acceptor) domain CSW12_01640 PF00486 Transcriptional regulatory protein, C terminal CSW12_01640 PF00072 Response regulator receiver domain CSW12_01655 PF02634 FdhD/NarQ family CSW12_01665 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CSW12_01665 PF01568 Molydopterin dinucleotide binding domain CSW12_01665 PF00384 Molybdopterin oxidoreductase CSW12_01665 PF00037 4Fe-4S binding domain CSW12_01665 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CSW12_01670 PF07849 Protein of unknown function (DUF1641) CSW12_01680 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CSW12_01680 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CSW12_01685 PF13520 Amino acid permease CSW12_01690 PF01022 Bacterial regulatory protein, arsR family CSW12_01695 PF00403 Heavy-metal-associated domain CSW12_01700 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain CSW12_01700 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain CSW12_01700 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family CSW12_01715 PF03413 Peptidase propeptide and YPEB domain CSW12_01715 PF02868 Thermolysin metallopeptidase, alpha-helical domain CSW12_01715 PF07504 Fungalysin/Thermolysin Propeptide Motif CSW12_01715 PF01447 Thermolysin metallopeptidase, catalytic domain CSW12_01735 PF04294 VanW like protein CSW12_01740 PF03816 Cell envelope-related transcriptional attenuator domain CSW12_01745 PF01773 Na+ dependent nucleoside transporter N-terminus CSW12_01745 PF07662 Na+ dependent nucleoside transporter C-terminus CSW12_01750 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CSW12_01755 PF03471 Transporter associated domain CSW12_01755 PF01595 Cyclin M transmembrane N-terminal domain CSW12_01755 PF00571 CBS domain CSW12_01760 PF10415 Fumarase C C-terminus CSW12_01760 PF00206 Lyase CSW12_01765 PF02652 L-lactate permease CSW12_01770 PF01022 Bacterial regulatory protein, arsR family CSW12_01775 PF08141 Small acid-soluble spore protein H family CSW12_01780 PF00854 POT family CSW12_01785 PF01497 Periplasmic binding protein CSW12_01790 PF01032 FecCD transport family CSW12_01795 PF01032 FecCD transport family CSW12_01800 PF00005 ABC transporter CSW12_01805 PF08241 Methyltransferase domain CSW12_01810 PF00155 Aminotransferase class I and II CSW12_01815 PF01370 NAD dependent epimerase/dehydratase family CSW12_01820 PF00293 NUDIX domain CSW12_01820 PF13344 Haloacid dehalogenase-like hydrolase CSW12_01825 PF00092 von Willebrand factor type A domain CSW12_01830 PF07728 AAA domain (dynein-related subfamily) CSW12_01835 PF13396 Phospholipase_D-nuclease N-terminal CSW12_01835 PF13091 PLD-like domain CSW12_01845 PF03707 Bacterial signalling protein N terminal repeat CSW12_01845 PF00990 Diguanylate cyclase, GGDEF domain CSW12_01845 PF00563 EAL domain CSW12_01850 PF13520 Amino acid permease CSW12_01855 PF00392 Bacterial regulatory proteins, gntR family CSW12_01855 PF07702 UTRA domain CSW12_01860 PF02378 Phosphotransferase system, EIIC CSW12_01860 PF00367 phosphotransferase system, EIIB CSW12_01865 PF16657 Maltogenic Amylase, C-terminal domain CSW12_01865 PF00128 Alpha amylase, catalytic domain CSW12_01880 PF03323 Bacillus/Clostridium GerA spore germination protein CSW12_01885 PF01636 Phosphotransferase enzyme family CSW12_01890 PF01235 Sodium:alanine symporter family CSW12_01895 PF00005 ABC transporter CSW12_01900 PF00497 Bacterial extracellular solute-binding proteins, family 3 CSW12_01905 PF00528 Binding-protein-dependent transport system inner membrane component CSW12_01910 PF00528 Binding-protein-dependent transport system inner membrane component CSW12_01915 PF00324 Amino acid permease CSW12_01930 PF04542 Sigma-70 region 2 CSW12_01930 PF08281 Sigma-70, region 4 CSW12_01940 PF13280 WYL domain CSW12_01940 PF08279 HTH domain CSW12_01945 PF01872 RibD C-terminal domain CSW12_01950 PF00989 PAS fold CSW12_01950 PF00512 His Kinase A (phospho-acceptor) domain CSW12_01950 PF18698 Histidine kinase sensor domain CSW12_01950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSW12_01950 PF00672 HAMP domain CSW12_01955 PF00072 Response regulator receiver domain CSW12_01955 PF00486 Transcriptional regulatory protein, C terminal CSW12_01965 PF01740 STAS domain CSW12_01965 PF00916 Sulfate permease family CSW12_01970 PF00582 Universal stress protein family CSW12_01980 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CSW12_01985 PF00528 Binding-protein-dependent transport system inner membrane component CSW12_01990 PF00528 Binding-protein-dependent transport system inner membrane component CSW12_01995 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CSW12_01995 PF00005 ABC transporter CSW12_02000 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CSW12_02000 PF00005 ABC transporter CSW12_02005 PF07690 Major Facilitator Superfamily CSW12_02010 PF01047 MarR family CSW12_02015 PF07690 Major Facilitator Superfamily CSW12_02020 PF00356 Bacterial regulatory proteins, lacI family CSW12_02025 PF00294 pfkB family carbohydrate kinase CSW12_02030 PF05025 RbsD / FucU transport protein family CSW12_02040 PF00589 Phage integrase family CSW12_02040 PF02899 Phage integrase, N-terminal SAM-like domain CSW12_02245 PF05105 Bacteriophage holin family CSW12_02250 PF01471 Putative peptidoglycan binding domain CSW12_02250 PF01476 LysM domain CSW12_02250 PF01510 N-acetylmuramoyl-L-alanine amidase CSW12_02295 PF02653 Branched-chain amino acid transport system / permease component CSW12_02300 PF13407 Periplasmic binding protein domain CSW12_02305 PF00923 Transaldolase/Fructose-6-phosphate aldolase CSW12_02310 PF05547 Immune inhibitor A peptidase M6 CSW12_02340 PF00882 Zinc dependent phospholipase C CSW12_02345 PF03372 Endonuclease/Exonuclease/phosphatase family CSW12_02435 PF00589 Phage integrase family CSW12_02440 PF04989 Cephalosporin hydroxylase CSW12_02470 PF00574 Clp protease CSW12_02540 PF05105 Bacteriophage holin family CSW12_02545 PF01510 N-acetylmuramoyl-L-alanine amidase CSW12_02545 PF12123 N-acetylmuramoyl-l-alanine amidase CSW12_02575 PF02796 Helix-turn-helix domain of resolvase CSW12_02575 PF00239 Resolvase, N terminal domain CSW12_02610 PF02673 Bacitracin resistance protein BacA CSW12_02615 PF00672 HAMP domain CSW12_02615 PF02743 Cache domain CSW12_02615 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CSW12_02620 PF01476 LysM domain CSW12_02620 PF06725 3D domain CSW12_02625 PF01381 Helix-turn-helix CSW12_02635 PF04203 Sortase domain CSW12_02645 PF00854 POT family CSW12_02650 PF05525 Branched-chain amino acid transport protein CSW12_02665 PF00324 Amino acid permease CSW12_02670 PF00860 Permease family CSW12_02685 PF13673 Acetyltransferase (GNAT) domain CSW12_02695 PF00999 Sodium/hydrogen exchanger family CSW12_02695 PF02080 TrkA-C domain CSW12_02695 PF02254 TrkA-N domain CSW12_02705 PF00510 Cytochrome c oxidase subunit III CSW12_02710 PF00115 Cytochrome C and Quinol oxidase polypeptide I CSW12_02715 PF02790 Cytochrome C oxidase subunit II, transmembrane domain CSW12_02720 PF00324 Amino acid permease CSW12_02725 PF13529 Peptidase_C39 like family CSW12_02730 PF07687 Peptidase dimerisation domain CSW12_02730 PF01546 Peptidase family M20/M25/M40 CSW12_02735 PF11755 Protein of unknown function (DUF3311) CSW12_02740 PF00474 Sodium:solute symporter family CSW12_02745 PF03323 Bacillus/Clostridium GerA spore germination protein CSW12_02750 PF03845 Spore germination protein CSW12_02755 PF05504 Spore germination B3/ GerAC like, C-terminal CSW12_02765 PF07670 Nucleoside recognition CSW12_02765 PF07664 Ferrous iron transport protein B C terminus CSW12_02765 PF02421 Ferrous iron transport protein B CSW12_02765 PF17910 FeoB cytosolic helical domain CSW12_02770 PF07664 Ferrous iron transport protein B C terminus CSW12_02770 PF17910 FeoB cytosolic helical domain CSW12_02770 PF02421 Ferrous iron transport protein B CSW12_02770 PF07670 Nucleoside recognition CSW12_02775 PF04023 FeoA domain CSW12_02775 PF07664 Ferrous iron transport protein B C terminus CSW12_02775 PF07670 Nucleoside recognition CSW12_02775 PF02421 Ferrous iron transport protein B CSW12_02775 PF17910 FeoB cytosolic helical domain CSW12_02780 PF12849 PBP superfamily domain CSW12_02785 PF00528 Binding-protein-dependent transport system inner membrane component CSW12_02790 PF00528 Binding-protein-dependent transport system inner membrane component CSW12_02800 PF00873 AcrB/AcrD/AcrF family CSW12_02925 PF00571 CBS domain CSW12_02945 PF08239 Bacterial SH3 domain CSW12_02945 PF00246 Zinc carboxypeptidase CSW12_02950 PF03070 TENA/THI-4/PQQC family CSW12_02955 PF00005 ABC transporter CSW12_02960 PF00528 Binding-protein-dependent transport system inner membrane component CSW12_02965 PF09084 NMT1/THI5 like CSW12_02970 PF02581 Thiamine monophosphate synthase CSW12_02975 PF01266 FAD dependent oxidoreductase CSW12_02980 PF02597 ThiS family CSW12_02985 PF05690 Thiazole biosynthesis protein ThiG CSW12_02990 PF00899 ThiF family CSW12_02995 PF08543 Phosphomethylpyrimidine kinase CSW12_03025 PF03814 Potassium-transporting ATPase A subunit CSW12_03035 PF02669 K+-transporting ATPase, c chain CSW12_03040 PF02702 Osmosensitive K+ channel His kinase sensor domain CSW12_03045 PF07690 Major Facilitator Superfamily CSW12_03050 PF01047 MarR family CSW12_03065 PF00860 Permease family CSW12_03075 PF03734 L,D-transpeptidase catalytic domain CSW12_03075 PF17969 L,D-transpeptidase C-terminal domain CSW12_03090 PF00085 Thioredoxin CSW12_03095 PF02600 Disulfide bond formation protein DsbB CSW12_03100 PF14148 YhdB-like protein CSW12_03110 PF03845 Spore germination protein CSW12_03120 PF03323 Bacillus/Clostridium GerA spore germination protein CSW12_03130 PF00881 Nitroreductase family CSW12_03135 PF04293 SpoVR like protein CSW12_03140 PF14319 Transposase zinc-binding domain CSW12_03140 PF04986 Putative transposase CSW12_03175 PF07728 AAA domain (dynein-related subfamily) CSW12_03175 PF12102 Domain of unknown function (DUF3578) CSW12_03175 PF12102 Domain of unknown function (DUF3578) CSW12_03175 PF07728 AAA domain (dynein-related subfamily) CSW12_03190 PF09339 IclR helix-turn-helix domain CSW12_03190 PF01614 Bacterial transcriptional regulator CSW12_03210 PF07992 Pyridine nucleotide-disulphide oxidoreductase CSW12_03210 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CSW12_03215 PF02583 Metal-sensitive transcriptional repressor CSW12_03220 PF00581 Rhodanese-like domain CSW12_03220 PF01206 Sulfurtransferase TusA CSW12_03225 PF00581 Rhodanese-like domain CSW12_03225 PF00753 Metallo-beta-lactamase superfamily CSW12_03230 PF01206 Sulfurtransferase TusA CSW12_03235 PF00581 Rhodanese-like domain CSW12_03245 PF13686 DsrE/DsrF/DrsH-like family CSW12_03250 PF01925 Sulfite exporter TauE/SafE CSW12_03260 PF03816 Cell envelope-related transcriptional attenuator domain CSW12_03265 PF08240 Alcohol dehydrogenase GroES-like domain CSW12_03265 PF00107 Zinc-binding dehydrogenase CSW12_03270 PF02690 Na+/Pi-cotransporter CSW12_03275 PF07690 Major Facilitator Superfamily CSW12_03290 PF08279 HTH domain CSW12_03290 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CSW12_03290 PF05043 Mga helix-turn-helix domain CSW12_03290 PF00874 PRD domain CSW12_03295 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CSW12_03300 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CSW12_03305 PF02378 Phosphotransferase system, EIIC CSW12_03320 PF01476 LysM domain CSW12_03320 PF06725 3D domain CSW12_03325 PF02687 FtsX-like permease family CSW12_03325 PF12704 MacB-like periplasmic core domain CSW12_03330 PF00005 ABC transporter CSW12_03340 PF09529 Integral membrane protein (intg_mem_TP0381) CSW12_03355 PF02687 FtsX-like permease family CSW12_03360 PF05525 Branched-chain amino acid transport protein CSW12_03365 PF05067 Manganese containing catalase CSW12_03370 PF12652 CotJB protein CSW12_03375 PF11007 Spore coat associated protein JA (CotJA) CSW12_03390 PF02735 Ku70/Ku80 beta-barrel domain CSW12_03400 PF09335 SNARE associated Golgi protein CSW12_03435 PF13520 Amino acid permease CSW12_03440 PF00999 Sodium/hydrogen exchanger family CSW12_03450 PF01380 SIS domain CSW12_03450 PF01418 Helix-turn-helix domain, rpiR family CSW12_03455 PF13580 SIS domain CSW12_03460 PF02378 Phosphotransferase system, EIIC CSW12_03460 PF00367 phosphotransferase system, EIIB CSW12_03470 PF07681 DoxX CSW12_03485 PF00892 EamA-like transporter family CSW12_03490 PF01037 Lrp/AsnC ligand binding domain CSW12_03495 PF00583 Acetyltransferase (GNAT) family CSW12_03495 PF14698 Argininosuccinate lyase C-terminal CSW12_03495 PF00206 Lyase CSW12_03500 PF00106 short chain dehydrogenase CSW12_03505 PF13411 MerR HTH family regulatory protein CSW12_03510 PF00893 Small Multidrug Resistance protein CSW12_03520 PF17934 Tetracyclin repressor-like, C-terminal domain CSW12_03520 PF00440 Bacterial regulatory proteins, tetR family CSW12_03525 PF07690 Major Facilitator Superfamily CSW12_03530 PF01638 HxlR-like helix-turn-helix CSW12_03540 PF02525 Flavodoxin-like fold CSW12_03550 PF01965 DJ-1/PfpI family CSW12_03555 PF18011 C-terminal domain found in long catalases CSW12_03555 PF00199 Catalase CSW12_03555 PF06628 Catalase-related immune-responsive CSW12_03565 PF13520 Amino acid permease CSW12_03570 PF01177 Asp/Glu/Hydantoin racemase CSW12_03580 PF00171 Aldehyde dehydrogenase family CSW12_03600 PF00005 ABC transporter CSW12_03600 PF00664 ABC transporter transmembrane region CSW12_03605 PF00664 ABC transporter transmembrane region CSW12_03605 PF00005 ABC transporter CSW12_03615 PF00497 Bacterial extracellular solute-binding proteins, family 3 CSW12_03620 PF00528 Binding-protein-dependent transport system inner membrane component CSW12_03625 PF00005 ABC transporter CSW12_03630 PF00269 Small, acid-soluble spore proteins, alpha/beta type CSW12_03640 PF14398 YheC/D like ATP-grasp CSW12_03650 PF04286 Protein of unknown function (DUF445) CSW12_03655 PF06133 Control of competence regulator ComK, YlbF/YmcA CSW12_03660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSW12_03660 PF07730 Histidine kinase CSW12_03665 PF00072 Response regulator receiver domain CSW12_03665 PF00196 Bacterial regulatory proteins, luxR family CSW12_03685 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CSW12_03685 PF00205 Thiamine pyrophosphate enzyme, central domain CSW12_03685 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CSW12_03690 PF03306 Alpha-acetolactate decarboxylase CSW12_03710 PF17961 Bacterial Ig domain CSW12_03710 PF00746 LPXTG cell wall anchor motif CSW12_03710 PF17210 SdrD B-like domain CSW12_03710 PF10425 C-terminus of bacterial fibrinogen-binding adhesin CSW12_03710 PF04650 YSIRK type signal peptide CSW12_03715 PF01471 Putative peptidoglycan binding domain CSW12_03715 PF01510 N-acetylmuramoyl-L-alanine amidase CSW12_03720 PF04055 Radical SAM superfamily CSW12_03730 PF00501 AMP-binding enzyme CSW12_03730 PF13193 AMP-binding enzyme C-terminal domain CSW12_03745 PF00916 Sulfate permease family CSW12_03745 PF01740 STAS domain CSW12_03750 PF14667 Polysaccharide biosynthesis C-terminal domain CSW12_03750 PF01943 Polysaccharide biosynthesis protein CSW12_03780 PF00378 Enoyl-CoA hydratase/isomerase CSW12_03805 PF01520 N-acetylmuramoyl-L-alanine amidase CSW12_03805 PF00395 S-layer homology domain CSW12_03815 PF11121 Protein of unknown function (DUF2639) CSW12_03820 PF05544 Proline racemase CSW12_03825 PF02423 Ornithine cyclodeaminase/mu-crystallin family CSW12_03835 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CSW12_03840 PF00528 Binding-protein-dependent transport system inner membrane component CSW12_03845 PF00528 Binding-protein-dependent transport system inner membrane component CSW12_03845 PF12911 N-terminal TM domain of oligopeptide transport permease C CSW12_03850 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CSW12_03850 PF00005 ABC transporter CSW12_03855 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CSW12_03855 PF00005 ABC transporter CSW12_03865 PF16123 Hydroxyacylglutathione hydrolase C-terminus CSW12_03865 PF00753 Metallo-beta-lactamase superfamily CSW12_03900 PF00083 Sugar (and other) transporter CSW12_03905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSW12_03905 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain CSW12_03910 PF12431 Transcriptional regulator CSW12_03910 PF00072 Response regulator receiver domain CSW12_03910 PF08279 HTH domain CSW12_03915 PF03401 Tripartite tricarboxylate transporter family receptor CSW12_03920 PF00293 NUDIX domain CSW12_03925 PF00271 Helicase conserved C-terminal domain CSW12_03925 PF00270 DEAD/DEAH box helicase CSW12_03935 PF04851 Type III restriction enzyme, res subunit CSW12_03935 PF00271 Helicase conserved C-terminal domain CSW12_03950 PF13411 MerR HTH family regulatory protein CSW12_03950 PF06445 GyrI-like small molecule binding domain CSW12_03970 PF00772 DnaB-like helicase N terminal domain CSW12_03970 PF03796 DnaB-like helicase C terminal domain CSW12_03985 PF01925 Sulfite exporter TauE/SafE CSW12_04005 PF07690 Major Facilitator Superfamily CSW12_04015 PF09680 Family of unknown function CSW12_04060 PF12146 Serine aminopeptidase, S33 CSW12_04060 PF13026 Protein of unknown function (DUF3887) CSW12_04110 PF01066 CDP-alcohol phosphatidyltransferase CSW12_04125 PF07690 Major Facilitator Superfamily CSW12_04145 PF02733 Dak1 domain CSW12_04155 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CSW12_04155 PF01348 Type II intron maturase CSW12_04175 PF02733 Dak1 domain CSW12_04220 PF18801 response regulator aspartate phosphatase H, N terminal CSW12_04230 PF00395 S-layer homology domain CSW12_04270 PF11181 Heat induced stress protein YflT CSW12_04275 PF05532 CsbD-like CSW12_04300 PF01740 STAS domain CSW12_04305 PF13581 Histidine kinase-like ATPase domain CSW12_04310 PF04542 Sigma-70 region 2 CSW12_04310 PF04539 Sigma-70 region 3 CSW12_04310 PF04545 Sigma-70, region 4 CSW12_04320 PF07228 Stage II sporulation protein E (SpoIIE) CSW12_04320 PF13426 PAS domain CSW12_04330 PF01739 CheR methyltransferase, SAM binding domain CSW12_04330 PF03705 CheR methyltransferase, all-alpha domain CSW12_04335 PF00672 HAMP domain CSW12_04335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSW12_04335 PF00512 His Kinase A (phospho-acceptor) domain CSW12_04335 PF01627 Hpt domain CSW12_04335 PF00072 Response regulator receiver domain CSW12_04335 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CSW12_04360 PF01906 Putative heavy-metal-binding CSW12_04375 PF00698 Acyl transferase domain CSW12_04375 PF08240 Alcohol dehydrogenase GroES-like domain CSW12_04375 PF16197 Ketoacyl-synthetase C-terminal extension CSW12_04375 PF00109 Beta-ketoacyl synthase, N-terminal domain CSW12_04375 PF02801 Beta-ketoacyl synthase, C-terminal domain CSW12_04375 PF08659 KR domain CSW12_04375 PF00550 Phosphopantetheine attachment site CSW12_04375 PF14765 Polyketide synthase dehydratase CSW12_04380 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family CSW12_04385 PF11121 Protein of unknown function (DUF2639) CSW12_04400 PF00149 Calcineurin-like phosphoesterase CSW12_04405 PF13514 AAA domain CSW12_04410 PF01336 OB-fold nucleic acid binding domain CSW12_04410 PF01966 HD domain CSW12_04420 PF01810 LysE type translocator CSW12_04425 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CSW12_04430 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CSW12_04435 PF18801 response regulator aspartate phosphatase H, N terminal CSW12_04435 PF17874 MalT-like TPR region CSW12_04445 PF08386 TAP-like protein CSW12_04445 PF00561 alpha/beta hydrolase fold CSW12_04450 PF14147 Sporulation protein YhaL CSW12_04465 PF00190 Cupin CSW12_04470 PF01381 Helix-turn-helix CSW12_04475 PF04309 Glycerol-3-phosphate responsive antiterminator CSW12_04480 PF00230 Major intrinsic protein CSW12_04485 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CSW12_04485 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CSW12_04490 PF16901 C-terminal domain of alpha-glycerophosphate oxidase CSW12_04490 PF01266 FAD dependent oxidoreductase CSW12_04500 PF08281 Sigma-70, region 4 CSW12_04500 PF04542 Sigma-70 region 2 CSW12_04515 PF13538 UvrD-like helicase C-terminal domain CSW12_04545 PF01047 MarR family CSW12_04550 PF12732 YtxH-like protein CSW12_04555 PF01230 HIT domain CSW12_04565 PF00005 ABC transporter CSW12_04570 PF05975 Bacterial ABC transporter protein EcsB CSW12_04575 PF12787 EcsC protein family CSW12_04585 PF00440 Bacterial regulatory proteins, tetR family CSW12_04585 PF17934 Tetracyclin repressor-like, C-terminal domain CSW12_04595 PF03703 Bacterial PH domain CSW12_04600 PF03703 Bacterial PH domain CSW12_04650 PF10014 2OG-Fe dioxygenase CSW12_04660 PF00892 EamA-like transporter family CSW12_04665 PF03703 Bacterial PH domain CSW12_04670 PF03703 Bacterial PH domain CSW12_04675 PF03992 Antibiotic biosynthesis monooxygenase CSW12_04680 PF00905 Penicillin binding protein transpeptidase domain CSW12_04680 PF00912 Transglycosylase CSW12_04685 PF01208 Uroporphyrinogen decarboxylase (URO-D) CSW12_04710 PF14319 Transposase zinc-binding domain CSW12_04710 PF04986 Putative transposase CSW12_04725 PF03965 Penicillinase repressor CSW12_04735 PF17932 Tetracyclin repressor-like, C-terminal domain CSW12_04735 PF00440 Bacterial regulatory proteins, tetR family CSW12_04765 PF00356 Bacterial regulatory proteins, lacI family CSW12_04770 PF14149 YhfH-like protein CSW12_04775 PF12706 Beta-lactamase superfamily domain CSW12_04780 PF03099 Biotin/lipoate A/B protein ligase family CSW12_04780 PF10437 Bacterial lipoate protein ligase C-terminus CSW12_04790 PF00501 AMP-binding enzyme CSW12_04790 PF13193 AMP-binding enzyme C-terminal domain CSW12_04795 PF00395 S-layer homology domain CSW12_04795 PF01520 N-acetylmuramoyl-L-alanine amidase CSW12_04805 PF00528 Binding-protein-dependent transport system inner membrane component CSW12_04810 PF00528 Binding-protein-dependent transport system inner membrane component CSW12_04815 PF12857 TOBE-like domain CSW12_04815 PF17850 CysA C-terminal regulatory domain CSW12_04815 PF00005 ABC transporter CSW12_04820 PF07968 Leukocidin/Hemolysin toxin family CSW12_04830 PF00149 Calcineurin-like phosphoesterase CSW12_04845 PF01966 HD domain CSW12_04855 PF08281 Sigma-70, region 4 CSW12_04855 PF04542 Sigma-70 region 2 CSW12_04860 PF06445 GyrI-like small molecule binding domain CSW12_04860 PF12833 Helix-turn-helix domain CSW12_04875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSW12_04875 PF00512 His Kinase A (phospho-acceptor) domain CSW12_04880 PF00072 Response regulator receiver domain CSW12_04880 PF00486 Transcriptional regulatory protein, C terminal CSW12_04900 PF01435 Peptidase family M48 CSW12_04900 PF16491 CAAX prenyl protease N-terminal, five membrane helices CSW12_04905 PF02743 Cache domain CSW12_04905 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CSW12_04905 PF00672 HAMP domain CSW12_04915 PF02018 Carbohydrate binding domain CSW12_04915 PF06452 Carbohydrate family 9 binding domain-like CSW12_04915 PF00331 Glycosyl hydrolase family 10 CSW12_04915 PF00395 S-layer homology domain CSW12_04925 PF01274 Malate synthase CSW12_04935 PF00463 Isocitrate lyase family CSW12_04950 PF00313 'Cold-shock' DNA-binding domain CSW12_04965 PF06338 ComK protein CSW12_04975 PF09335 SNARE associated Golgi protein CSW12_04980 PF10502 Signal peptidase, peptidase S26 CSW12_04985 PF13361 UvrD-like helicase C-terminal domain CSW12_04985 PF12705 PD-(D/E)XK nuclease superfamily CSW12_04990 PF13361 UvrD-like helicase C-terminal domain CSW12_04990 PF00580 UvrD/REP helicase N-terminal domain CSW12_04990 PF12705 PD-(D/E)XK nuclease superfamily CSW12_05000 PF10676 Spore germination protein gerPA/gerPF CSW12_05005 PF10970 Spore germination protein GerPE CSW12_05015 PF10737 Spore germination protein GerPC CSW12_05020 PF10803 Spore germination GerPB CSW12_05025 PF10676 Spore germination protein gerPA/gerPF CSW12_05030 PF09388 Spo0E like sporulation regulatory protein CSW12_05035 PF01557 Fumarylacetoacetate (FAA) hydrolase family CSW12_05045 PF00202 Aminotransferase class-III CSW12_05050 PF07457 Protein of unknown function (DUF1516) CSW12_05060 PF00733 Asparagine synthase CSW12_05060 PF13537 Glutamine amidotransferase domain CSW12_05065 PF00239 Resolvase, N terminal domain CSW12_05065 PF02796 Helix-turn-helix domain of resolvase CSW12_05075 PF01726 LexA DNA binding domain CSW12_05075 PF00717 Peptidase S24-like CSW12_05270 PF01510 N-acetylmuramoyl-L-alanine amidase CSW12_05285 PF00733 Asparagine synthase CSW12_05285 PF13537 Glutamine amidotransferase domain CSW12_05300 PF00199 Catalase CSW12_05300 PF06628 Catalase-related immune-responsive CSW12_05305 PF00909 Ammonium Transporter Family CSW12_05310 PF00128 Alpha amylase, catalytic domain CSW12_05330 PF04461 Protein of unknown function (DUF520) CSW12_05335 PF17783 CvfB-like winged helix domain CSW12_05335 PF13509 S1 domain CSW12_05370 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CSW12_05370 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CSW12_05375 PF12758 Protein of unknown function (DUF3813) CSW12_05395 PF14168 YjzC-like protein CSW12_05400 PF10431 C-terminal, D2-small domain, of ClpB protein CSW12_05400 PF17871 AAA lid domain CSW12_05400 PF07724 AAA domain (Cdc48 subfamily) CSW12_05400 PF02861 Clp amino terminal domain, pathogenicity island component CSW12_05400 PF00004 ATPase family associated with various cellular activities (AAA) CSW12_05420 PF10815 ComZ CSW12_05425 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CSW12_05425 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CSW12_05430 PF00109 Beta-ketoacyl synthase, N-terminal domain CSW12_05430 PF02801 Beta-ketoacyl synthase, C-terminal domain CSW12_05435 PF10026 Predicted Zn-dependent protease (DUF2268) CSW12_05440 PF12227 Protein of unknown function (DUF3603) CSW12_05450 PF00579 tRNA synthetases class I (W and Y) CSW12_05465 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CSW12_05470 PF00528 Binding-protein-dependent transport system inner membrane component CSW12_05475 PF12911 N-terminal TM domain of oligopeptide transport permease C CSW12_05475 PF00528 Binding-protein-dependent transport system inner membrane component CSW12_05480 PF00005 ABC transporter CSW12_05480 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CSW12_05485 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CSW12_05485 PF00005 ABC transporter CSW12_05490 PF01554 MatE CSW12_05495 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CSW12_05510 PF03960 ArsC family CSW12_05515 PF03741 Integral membrane protein TerC family CSW12_05520 PF05389 Negative regulator of genetic competence (MecA) CSW12_05525 PF13091 PLD-like domain CSW12_05525 PF13396 Phospholipase_D-nuclease N-terminal CSW12_05535 PF08439 Oligopeptidase F CSW12_05535 PF01432 Peptidase family M3 CSW12_05550 PF01152 Bacterial-like globin CSW12_05555 PF01928 CYTH domain CSW12_05565 PF04607 Region found in RelA / SpoT proteins CSW12_05570 PF01513 ATP-NAD kinase CSW12_05575 PF00849 RNA pseudouridylate synthase CSW12_05585 PF00149 Calcineurin-like phosphoesterase CSW12_05590 PF01098 Cell cycle protein CSW12_05595 PF00535 Glycosyl transferase family 2 CSW12_05600 PF08241 Methyltransferase domain CSW12_05605 PF05711 Macrocin-O-methyltransferase (TylF) CSW12_05615 PF00535 Glycosyl transferase family 2 CSW12_05615 PF13181 Tetratricopeptide repeat CSW12_05635 PF00483 Nucleotidyl transferase CSW12_05640 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase CSW12_05645 PF16363 GDP-mannose 4,6 dehydratase CSW12_05650 PF04321 RmlD substrate binding domain CSW12_05670 PF07098 Protein of unknown function (DUF1360) CSW12_05690 PF00580 UvrD/REP helicase N-terminal domain CSW12_05690 PF13361 UvrD-like helicase C-terminal domain CSW12_05695 PF13673 Acetyltransferase (GNAT) domain CSW12_05705 PF00756 Putative esterase CSW12_05725 PF02368 Bacterial Ig-like domain (group 2) CSW12_05730 PF00474 Sodium:solute symporter family CSW12_05745 PF02885 Glycosyl transferase family, helical bundle domain CSW12_05745 PF00591 Glycosyl transferase family, a/b domain CSW12_05745 PF00117 Glutamine amidotransferase class-I CSW12_05750 PF02885 Glycosyl transferase family, helical bundle domain CSW12_05750 PF00591 Glycosyl transferase family, a/b domain CSW12_05755 PF00218 Indole-3-glycerol phosphate synthase CSW12_05760 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase CSW12_05765 PF00291 Pyridoxal-phosphate dependent enzyme CSW12_05770 PF00290 Tryptophan synthase alpha chain CSW12_05780 PF02652 L-lactate permease CSW12_05795 PF10042 Uncharacterized conserved protein (DUF2278) CSW12_05825 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CSW12_05825 PF07992 Pyridine nucleotide-disulphide oxidoreductase CSW12_05840 PF01209 ubiE/COQ5 methyltransferase family CSW12_05845 PF00881 Nitroreductase family CSW12_05860 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CSW12_05860 PF00364 Biotin-requiring enzyme CSW12_05860 PF02817 e3 binding domain CSW12_05865 PF02779 Transketolase, pyrimidine binding domain CSW12_05865 PF16870 2-oxoglutarate dehydrogenase C-terminal CSW12_05865 PF00676 Dehydrogenase E1 component CSW12_05870 PF01381 Helix-turn-helix CSW12_05915 PF00005 ABC transporter CSW12_05915 PF13732 Domain of unknown function (DUF4162) CSW12_05950 PF00768 D-alanyl-D-alanine carboxypeptidase CSW12_05950 PF07943 Penicillin-binding protein 5, C-terminal domain CSW12_05960 PF12389 Camelysin metallo-endopeptidase CSW12_05970 PF12389 Camelysin metallo-endopeptidase CSW12_05975 PF08671 Anti-repressor SinI CSW12_05975 PF01381 Helix-turn-helix CSW12_05985 PF05547 Immune inhibitor A peptidase M6 CSW12_05990 PF00171 Aldehyde dehydrogenase family CSW12_05995 PF00005 ABC transporter CSW12_05995 PF08402 TOBE domain CSW12_06000 PF00528 Binding-protein-dependent transport system inner membrane component CSW12_06005 PF00528 Binding-protein-dependent transport system inner membrane component CSW12_06010 PF13416 Bacterial extracellular solute-binding protein CSW12_06020 PF03176 MMPL family CSW12_06030 PF01479 S4 domain CSW12_06030 PF00849 RNA pseudouridylate synthase CSW12_06040 PF00188 Cysteine-rich secretory protein family CSW12_06045 PF13183 4Fe-4S dicluster domain CSW12_06045 PF02754 Cysteine-rich domain CSW12_06050 PF01565 FAD binding domain CSW12_06050 PF02913 FAD linked oxidases, C-terminal domain CSW12_06055 PF05651 Putative sugar diacid recognition CSW12_06055 PF13556 PucR C-terminal helix-turn-helix domain CSW12_06055 PF17853 GGDEF-like domain CSW12_06065 PF00486 Transcriptional regulatory protein, C terminal CSW12_06065 PF00072 Response regulator receiver domain CSW12_06070 PF00989 PAS fold CSW12_06070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSW12_06070 PF00512 His Kinase A (phospho-acceptor) domain CSW12_06070 PF18698 Histidine kinase sensor domain CSW12_06070 PF00672 HAMP domain CSW12_06075 PF07729 FCD domain CSW12_06075 PF00392 Bacterial regulatory proteins, gntR family CSW12_06080 PF02754 Cysteine-rich domain CSW12_06085 PF13183 4Fe-4S dicluster domain CSW12_06085 PF11870 Domain of unknown function (DUF3390) CSW12_06085 PF02589 LUD domain CSW12_06090 PF02589 LUD domain CSW12_06095 PF06750 Bacterial Peptidase A24 N-terminal domain CSW12_06095 PF01478 Type IV leader peptidase family CSW12_06105 PF01226 Formate/nitrite transporter CSW12_06110 PF03741 Integral membrane protein TerC family CSW12_06115 PF02386 Cation transport protein CSW12_06120 PF00269 Small, acid-soluble spore proteins, alpha/beta type CSW12_06125 PF01575 MaoC like domain CSW12_06150 PF00561 alpha/beta hydrolase fold CSW12_06160 PF02386 Cation transport protein CSW12_06185 PF08402 TOBE domain CSW12_06185 PF00005 ABC transporter CSW12_06190 PF00528 Binding-protein-dependent transport system inner membrane component CSW12_06195 PF13419 Haloacid dehalogenase-like hydrolase CSW12_06200 PF00266 Aminotransferase class-V CSW12_06210 PF08220 DeoR-like helix-turn-helix domain CSW12_06210 PF00455 DeoR C terminal sensor domain CSW12_06225 PF00596 Class II Aldolase and Adducin N-terminal domain CSW12_06235 PF04748 Divergent polysaccharide deacetylase CSW12_06240 PF09388 Spo0E like sporulation regulatory protein CSW12_06245 PF00512 His Kinase A (phospho-acceptor) domain CSW12_06245 PF02743 Cache domain CSW12_06245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSW12_06250 PF01047 MarR family CSW12_06260 PF12867 DinB superfamily CSW12_06270 PF13188 PAS domain CSW12_06270 PF13426 PAS domain CSW12_06270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSW12_06270 PF00512 His Kinase A (phospho-acceptor) domain CSW12_06270 PF00989 PAS fold CSW12_06275 PF06508 Queuosine biosynthesis protein QueC CSW12_06280 PF01242 6-pyruvoyl tetrahydropterin synthase CSW12_06285 PF04055 Radical SAM superfamily CSW12_06290 PF14489 QueF-like protein CSW12_06295 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) CSW12_06330 PF07972 NrdI Flavodoxin like CSW12_06335 PF02867 Ribonucleotide reductase, barrel domain CSW12_06335 PF08343 Ribonucleotide reductase N-terminal CSW12_06335 PF00317 Ribonucleotide reductase, all-alpha domain CSW12_06345 PF13392 HNH endonuclease CSW12_06350 PF00268 Ribonucleotide reductase, small chain CSW12_06355 PF00392 Bacterial regulatory proteins, gntR family CSW12_06360 PF00005 ABC transporter CSW12_06370 PF00005 ABC transporter CSW12_06390 PF01037 Lrp/AsnC ligand binding domain CSW12_06400 PF00857 Isochorismatase family CSW12_06410 PF02016 LD-carboxypeptidase N-terminal domain CSW12_06410 PF17676 LD-carboxypeptidase C-terminal domain CSW12_06415 PF03060 Nitronate monooxygenase CSW12_06420 PF04914 DltD protein CSW12_06425 PF00550 Phosphopantetheine attachment site CSW12_06430 PF03062 MBOAT, membrane-bound O-acyltransferase family CSW12_06435 PF00501 AMP-binding enzyme CSW12_06435 PF13193 AMP-binding enzyme C-terminal domain CSW12_06445 PF07687 Peptidase dimerisation domain CSW12_06445 PF01546 Peptidase family M20/M25/M40 CSW12_06455 PF00258 Flavodoxin CSW12_06470 PF01636 Phosphotransferase enzyme family CSW12_06515 PF02673 Bacitracin resistance protein BacA CSW12_06530 PF01047 MarR family CSW12_06540 PF00375 Sodium:dicarboxylate symporter family CSW12_06545 PF02386 Cation transport protein CSW12_06555 PF09579 Sporulation protein YtfJ (Spore_YtfJ) CSW12_06570 PF03698 Uncharacterised protein family (UPF0180) CSW12_06585 PF01063 Amino-transferase class IV CSW12_06590 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CSW12_06590 PF00205 Thiamine pyrophosphate enzyme, central domain CSW12_06590 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CSW12_06595 PF01842 ACT domain CSW12_06595 PF10369 Small subunit of acetolactate synthase CSW12_06600 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain CSW12_06600 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CSW12_06605 PF08502 LeuA allosteric (dimerisation) domain CSW12_06605 PF00682 HMGL-like CSW12_06610 PF00180 Isocitrate/isopropylmalate dehydrogenase CSW12_06615 PF00330 Aconitase family (aconitate hydratase) CSW12_06620 PF00694 Aconitase C-terminal domain CSW12_06625 PF13393 Histidyl-tRNA synthetase CSW12_06630 PF01634 ATP phosphoribosyltransferase CSW12_06635 PF00815 Histidinol dehydrogenase CSW12_06640 PF00475 Imidazoleglycerol-phosphate dehydratase CSW12_06645 PF00117 Glutamine amidotransferase class-I CSW12_06650 PF00977 Histidine biosynthesis protein CSW12_06655 PF00977 Histidine biosynthesis protein CSW12_06660 PF01502 Phosphoribosyl-AMP cyclohydrolase CSW12_06665 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase CSW12_06670 PF02811 PHP domain CSW12_06680 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CSW12_06680 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CSW12_06685 PF01066 CDP-alcohol phosphatidyltransferase CSW12_06690 PF00884 Sulfatase CSW12_06700 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CSW12_06700 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CSW12_06710 PF01507 Phosphoadenosine phosphosulfate reductase family CSW12_06715 PF01747 ATP-sulfurylase CSW12_06715 PF14306 PUA-like domain CSW12_06725 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CSW12_06725 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CSW12_06735 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CSW12_06740 PF01903 CbiX CSW12_06760 PF00209 Sodium:neurotransmitter symporter family CSW12_06770 PF00375 Sodium:dicarboxylate symporter family CSW12_06780 PF03553 Na+/H+ antiporter family CSW12_06795 PF09922 Cell wall-active antibiotics response 4TMS YvqF CSW12_06800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSW12_06800 PF00672 HAMP domain CSW12_06800 PF07730 Histidine kinase CSW12_06805 PF00072 Response regulator receiver domain CSW12_06805 PF00196 Bacterial regulatory proteins, luxR family CSW12_06810 PF13610 DDE domain CSW12_06820 PF05525 Branched-chain amino acid transport protein CSW12_06830 PF01209 ubiE/COQ5 methyltransferase family CSW12_06855 PF00175 Oxidoreductase NAD-binding domain CSW12_06855 PF00042 Globin CSW12_06855 PF00970 Oxidoreductase FAD-binding domain CSW12_06875 PF01925 Sulfite exporter TauE/SafE CSW12_06880 PF01384 Phosphate transporter family CSW12_06885 PF01865 Protein of unknown function DUF47 CSW12_06890 PF00905 Penicillin binding protein transpeptidase domain CSW12_06890 PF00912 Transglycosylase CSW12_06905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSW12_06905 PF00512 His Kinase A (phospho-acceptor) domain CSW12_06905 PF00989 PAS fold CSW12_06910 PF01904 Protein of unknown function DUF72 CSW12_06920 PF00589 Phage integrase family CSW12_06925 PF16736 Single Cache-like CSW12_06925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSW12_06925 PF00512 His Kinase A (phospho-acceptor) domain CSW12_06925 PF00989 PAS fold CSW12_06930 PF01048 Phosphorylase superfamily CSW12_06940 PF03706 Lysylphosphatidylglycerol synthase TM region CSW12_06940 PF09924 Uncharacterised conserved protein (DUF2156) CSW12_06955 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CSW12_06955 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CSW12_06960 PF00768 D-alanyl-D-alanine carboxypeptidase CSW12_06960 PF07943 Penicillin-binding protein 5, C-terminal domain CSW12_06965 PF07670 Nucleoside recognition CSW12_06970 PF07670 Nucleoside recognition CSW12_06975 PF01479 S4 domain CSW12_06975 PF00849 RNA pseudouridylate synthase CSW12_06980 PF00578 AhpC/TSA family CSW12_06985 PF05140 ResB-like family CSW12_06990 PF01578 Cytochrome C assembly protein CSW12_06995 PF00486 Transcriptional regulatory protein, C terminal CSW12_06995 PF00072 Response regulator receiver domain CSW12_07000 PF00672 HAMP domain CSW12_07000 PF00989 PAS fold CSW12_07000 PF00512 His Kinase A (phospho-acceptor) domain CSW12_07000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSW12_07000 PF18698 Histidine kinase sensor domain CSW12_07005 PF01923 Cobalamin adenosyltransferase CSW12_07020 PF12822 ECF transporter, substrate-specific component CSW12_07025 PF14319 Transposase zinc-binding domain CSW12_07025 PF04986 Putative transposase CSW12_07040 PF00271 Helicase conserved C-terminal domain CSW12_07040 PF00270 DEAD/DEAH box helicase CSW12_07045 PF02517 CPBP intramembrane metalloprotease CSW12_07055 PF00149 Calcineurin-like phosphoesterase CSW12_07060 PF13411 MerR HTH family regulatory protein CSW12_07065 PF05389 Negative regulator of genetic competence (MecA) CSW12_07070 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CSW12_07070 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CSW12_07095 PF17763 Glutaminase/Asparaginase C-terminal domain CSW12_07095 PF00710 Asparaginase, N-terminal CSW12_07115 PF02224 Cytidylate kinase CSW12_07120 PF00575 S1 RNA binding domain CSW12_07125 PF01070 FMN-dependent dehydrogenase CSW12_07130 PF14140 YpzI-like protein CSW12_07140 PF14045 YIEGIA protein CSW12_07150 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CSW12_07150 PF01926 50S ribosome-binding GTPase CSW12_07155 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CSW12_07155 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CSW12_07170 PF00356 Bacterial regulatory proteins, lacI family CSW12_07175 PF13726 Na+-H+ antiporter family CSW12_07175 PF03553 Na+/H+ antiporter family CSW12_07180 PF12146 Serine aminopeptidase, S33 CSW12_07190 PF00565 Staphylococcal nuclease homologue CSW12_07190 PF00746 LPXTG cell wall anchor motif CSW12_07190 PF02872 5'-nucleotidase, C-terminal domain CSW12_07190 PF00149 Calcineurin-like phosphoesterase CSW12_07205 PF13673 Acetyltransferase (GNAT) domain CSW12_07205 PF04229 GrpB protein CSW12_07210 PF00248 Aldo/keto reductase family CSW12_07215 PF00248 Aldo/keto reductase family CSW12_07220 PF13072 Mother cell inhibitor of FtsZ CSW12_07225 PF00293 NUDIX domain CSW12_07235 PF01944 Stage II sporulation protein M CSW12_07240 PF01475 Ferric uptake regulator family CSW12_07245 PF14004 Protein of unknown function (DUF4227) CSW12_07250 PF02899 Phage integrase, N-terminal SAM-like domain CSW12_07250 PF00589 Phage integrase family CSW12_07255 PF13115 YtkA-like CSW12_07260 PF01676 Metalloenzyme superfamily CSW12_07265 PF01048 Phosphorylase superfamily CSW12_07270 PF02885 Glycosyl transferase family, helical bundle domain CSW12_07270 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain CSW12_07270 PF00591 Glycosyl transferase family, a/b domain CSW12_07275 PF01544 CorA-like Mg2+ transporter protein CSW12_07280 PF00860 Permease family CSW12_07290 PF01047 MarR family CSW12_07305 PF00005 ABC transporter CSW12_07310 PF00392 Bacterial regulatory proteins, gntR family CSW12_07320 PF00768 D-alanyl-D-alanine carboxypeptidase CSW12_07320 PF07943 Penicillin-binding protein 5, C-terminal domain CSW12_07325 PF01740 STAS domain CSW12_07330 PF13581 Histidine kinase-like ATPase domain CSW12_07335 PF04542 Sigma-70 region 2 CSW12_07335 PF04539 Sigma-70 region 3 CSW12_07335 PF04545 Sigma-70, region 4 CSW12_07340 PF00209 Sodium:neurotransmitter symporter family CSW12_07350 PF12164 Stage V sporulation protein AA CSW12_07355 PF13782 Stage V sporulation protein AB CSW12_07360 PF03862 SpoVAC/SpoVAEB sporulation membrane protein CSW12_07365 PF07451 Stage V sporulation protein AD (SpoVAD) CSW12_07370 PF03862 SpoVAC/SpoVAEB sporulation membrane protein CSW12_07375 PF14097 Stage V sporulation protein AE1 CSW12_07380 PF03323 Bacillus/Clostridium GerA spore germination protein CSW12_07390 PF06207 Protein of unknown function (DUF1002) CSW12_07395 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CSW12_07400 PF00583 Acetyltransferase (GNAT) family CSW12_07405 PF03745 Domain of unknown function (DUF309) CSW12_07415 PF02616 Segregation and condensation protein ScpA CSW12_07425 PF04079 Segregation and condensation complex subunit ScpB CSW12_07435 PF01979 Amidohydrolase family CSW12_07440 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CSW12_07455 PF00874 PRD domain CSW12_07455 PF03123 CAT RNA binding domain CSW12_07460 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CSW12_07460 PF00367 phosphotransferase system, EIIB CSW12_07460 PF02378 Phosphotransferase system, EIIC CSW12_07465 PF00381 PTS HPr component phosphorylation site CSW12_07470 PF00391 PEP-utilising enzyme, mobile domain CSW12_07470 PF05524 PEP-utilising enzyme, N-terminal CSW12_07470 PF02896 PEP-utilising enzyme, TIM barrel domain CSW12_07485 PF00881 Nitroreductase family CSW12_07490 PF00990 Diguanylate cyclase, GGDEF domain CSW12_07495 PF00144 Beta-lactamase CSW12_07500 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CSW12_07500 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CSW12_07515 PF03079 ARD/ARD' family CSW12_07520 PF00596 Class II Aldolase and Adducin N-terminal domain CSW12_07530 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain CSW12_07530 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain CSW12_07535 PF00155 Aminotransferase class I and II CSW12_07540 PF00795 Carbon-nitrogen hydrolase CSW12_07545 PF01636 Phosphotransferase enzyme family CSW12_07565 PF03551 Transcriptional regulator PadR-like family CSW12_07600 PF02803 Thiolase, C-terminal domain CSW12_07600 PF00108 Thiolase, N-terminal domain CSW12_07615 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CSW12_07615 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CSW12_07630 PF02142 MGS-like domain CSW12_07630 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CSW12_07630 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CSW12_07675 PF00005 ABC transporter CSW12_07675 PF17912 MalK OB fold domain CSW12_07675 PF03459 TOBE domain CSW12_07680 PF16657 Maltogenic Amylase, C-terminal domain CSW12_07680 PF00128 Alpha amylase, catalytic domain CSW12_07685 PF16657 Maltogenic Amylase, C-terminal domain CSW12_07685 PF02903 Alpha amylase, N-terminal ig-like domain CSW12_07685 PF00128 Alpha amylase, catalytic domain CSW12_07690 PF13416 Bacterial extracellular solute-binding protein CSW12_07695 PF00528 Binding-protein-dependent transport system inner membrane component CSW12_07700 PF00528 Binding-protein-dependent transport system inner membrane component CSW12_07705 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CSW12_07705 PF00356 Bacterial regulatory proteins, lacI family CSW12_07710 PF00155 Aminotransferase class I and II CSW12_07720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSW12_07720 PF00512 His Kinase A (phospho-acceptor) domain CSW12_07735 PF14040 Deoxyribonuclease NucA/NucB CSW12_07745 PF08267 Cobalamin-independent synthase, N-terminal domain CSW12_07745 PF01717 Cobalamin-independent synthase, Catalytic domain CSW12_07755 PF07690 Major Facilitator Superfamily CSW12_07780 PF14177 YkyB-like protein CSW12_07785 PF02541 Ppx/GppA phosphatase family CSW12_07790 PF13090 Polyphosphate kinase C-terminal domain 2 CSW12_07790 PF13089 Polyphosphate kinase N-terminal domain CSW12_07790 PF17941 Polyphosphate kinase C-terminal domain 1 CSW12_07790 PF02503 Polyphosphate kinase middle domain CSW12_07800 PF10518 TAT (twin-arginine translocation) pathway signal sequence CSW12_07800 PF00149 Calcineurin-like phosphoesterase CSW12_07810 PF10388 EAL-domain associated signalling protein domain CSW12_07810 PF00563 EAL domain CSW12_07825 PF08796 Protein of unknown function (DUF1797) CSW12_07835 PF04308 Ribonuclease H-like CSW12_07850 PF03466 LysR substrate binding domain CSW12_07850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSW12_07855 PF14602 Hexapeptide repeat of succinyl-transferase CSW12_07855 PF00132 Bacterial transferase hexapeptide (six repeats) CSW12_07855 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal CSW12_07860 PF01546 Peptidase family M20/M25/M40 CSW12_07860 PF07687 Peptidase dimerisation domain CSW12_07870 PF02080 TrkA-C domain CSW12_07870 PF02254 TrkA-N domain CSW12_07875 PF00753 Metallo-beta-lactamase superfamily CSW12_07875 PF17770 Ribonuclease J C-terminal domain CSW12_07875 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CSW12_07895 PF01327 Polypeptide deformylase CSW12_07905 PF00676 Dehydrogenase E1 component CSW12_07910 PF02780 Transketolase, C-terminal domain CSW12_07910 PF02779 Transketolase, pyrimidine binding domain CSW12_07915 PF00364 Biotin-requiring enzyme CSW12_07915 PF02817 e3 binding domain CSW12_07915 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CSW12_07920 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CSW12_07920 PF07992 Pyridine nucleotide-disulphide oxidoreductase CSW12_07960 PF01276 Orn/Lys/Arg decarboxylase, major domain CSW12_07960 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CSW12_07965 PF05256 Uncharacterised protein family (UPF0223) CSW12_07970 PF06335 Protein of unknown function (DUF1054) CSW12_07980 PF00459 Inositol monophosphatase family CSW12_07995 PF14036 YlaH-like protein CSW12_08005 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) CSW12_08015 PF13638 PIN domain CSW12_08015 PF02562 PhoH-like protein CSW12_08025 PF07408 Protein of unknown function (DUF1507) CSW12_08030 PF01098 Cell cycle protein CSW12_08040 PF02436 Conserved carboxylase domain CSW12_08040 PF00289 Biotin carboxylase, N-terminal domain CSW12_08040 PF00364 Biotin-requiring enzyme CSW12_08040 PF00682 HMGL-like CSW12_08040 PF02785 Biotin carboxylase C-terminal domain CSW12_08040 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CSW12_08045 PF02628 Cytochrome oxidase assembly protein CSW12_08050 PF01040 UbiA prenyltransferase family CSW12_08055 PF02790 Cytochrome C oxidase subunit II, transmembrane domain CSW12_08055 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CSW12_08055 PF00034 Cytochrome c CSW12_08060 PF00115 Cytochrome C and Quinol oxidase polypeptide I CSW12_08065 PF00510 Cytochrome c oxidase subunit III CSW12_08070 PF03626 Prokaryotic Cytochrome C oxidase subunit IV CSW12_08075 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) CSW12_08080 PF00795 Carbon-nitrogen hydrolase CSW12_08085 PF08868 YugN-like family CSW12_08090 PF00188 Cysteine-rich secretory protein family CSW12_08090 PF14504 CAP-associated N-terminal CSW12_08095 PF14071 Putative coat protein CSW12_08100 PF14003 YlbE-like protein CSW12_08105 PF00300 Histidine phosphatase superfamily (branch 1) CSW12_08110 PF06133 Control of competence regulator ComK, YlbF/YmcA CSW12_08115 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) CSW12_08130 PF01467 Cytidylyltransferase-like CSW12_08135 PF07670 Nucleoside recognition CSW12_08140 PF01734 Patatin-like phospholipase CSW12_08145 PF13180 PDZ domain CSW12_08145 PF05362 Lon protease (S16) C-terminal proteolytic domain CSW12_08150 PF05636 HIGH Nucleotidyl Transferase CSW12_08155 PF02620 Large ribosomal RNA subunit accumulation protein YceD CSW12_08160 PF01783 Ribosomal L32p protein family CSW12_08175 PF00583 Acetyltransferase (GNAT) family CSW12_08180 PF08546 Ketopantoate reductase PanE/ApbA C terminal CSW12_08180 PF02558 Ketopantoate reductase PanE/ApbA CSW12_08185 PF10079 Bacillithiol biosynthesis BshC CSW12_08190 PF01795 MraW methylase family CSW12_08195 PF04977 Septum formation initiator CSW12_08205 PF03793 PASTA domain CSW12_08205 PF03717 Penicillin-binding Protein dimerisation domain CSW12_08205 PF00905 Penicillin binding protein transpeptidase domain CSW12_08210 PF08245 Mur ligase middle domain CSW12_08210 PF01225 Mur ligase family, catalytic domain CSW12_08210 PF02875 Mur ligase family, glutamate ligase domain CSW12_08215 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 CSW12_08215 PF00953 Glycosyl transferase family 4 CSW12_08220 PF02875 Mur ligase family, glutamate ligase domain CSW12_08220 PF08245 Mur ligase middle domain CSW12_08225 PF01098 Cell cycle protein CSW12_08230 PF03033 Glycosyltransferase family 28 N-terminal domain CSW12_08230 PF04101 Glycosyltransferase family 28 C-terminal domain CSW12_08235 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CSW12_08235 PF01565 FAD binding domain CSW12_08240 PF03799 Cell division protein FtsQ CSW12_08240 PF08478 POTRA domain, FtsQ-type CSW12_08245 PF02491 SHS2 domain inserted in FTSA CSW12_08250 PF12327 FtsZ family, C-terminal domain CSW12_08250 PF00091 Tubulin/FtsZ family, GTPase domain CSW12_08255 PF03419 Sporulation factor SpoIIGA CSW12_08260 PF04545 Sigma-70, region 4 CSW12_08260 PF04542 Sigma-70 region 2 CSW12_08265 PF04545 Sigma-70, region 4 CSW12_08265 PF04542 Sigma-70 region 2 CSW12_08265 PF04539 Sigma-70 region 3 CSW12_08270 PF05239 PRC-barrel domain CSW12_08280 PF01168 Alanine racemase, N-terminal domain CSW12_08285 PF04472 Cell division protein SepF CSW12_08290 PF02325 YGGT family CSW12_08295 PF17774 Putative RNA-binding domain in YlmH CSW12_08295 PF01479 S4 domain CSW12_08300 PF05103 DivIVA protein CSW12_08305 PF06827 Zinc finger found in FPG and IleRS CSW12_08305 PF08264 Anticodon-binding domain of tRNA CSW12_08305 PF00133 tRNA synthetases class I (I, L, M and V) CSW12_08315 PF01252 Signal peptidase (SPase) II CSW12_08320 PF01479 S4 domain CSW12_08320 PF00849 RNA pseudouridylate synthase CSW12_08325 PF00156 Phosphoribosyl transferase domain CSW12_08330 PF00860 Permease family CSW12_08335 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CSW12_08335 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CSW12_08340 PF01979 Amidohydrolase family CSW12_08345 PF00117 Glutamine amidotransferase class-I CSW12_08345 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CSW12_08350 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CSW12_08350 PF02142 MGS-like domain CSW12_08350 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CSW12_08355 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B CSW12_08360 PF01180 Dihydroorotate dehydrogenase CSW12_08365 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CSW12_08370 PF00156 Phosphoribosyl transferase domain CSW12_08400 PF00557 Metallopeptidase family M24 CSW12_08400 PF01321 Creatinase/Prolidase N-terminal domain CSW12_08425 PF00689 Cation transporting ATPase, C-terminus CSW12_08425 PF00690 Cation transporter/ATPase, N-terminus CSW12_08430 PF08340 Domain of unknown function (DUF1732) CSW12_08430 PF03755 YicC-like family, N-terminal region CSW12_08435 PF04025 Domain of unknown function (DUF370) CSW12_08440 PF00625 Guanylate kinase CSW12_08445 PF01192 RNA polymerase Rpb6 CSW12_08450 PF02441 Flavoprotein CSW12_08450 PF04127 DNA / pantothenate metabolism flavoprotein CSW12_08455 PF18319 PriA DNA helicase Cys-rich region (CRR) domain CSW12_08455 PF04851 Type III restriction enzyme, res subunit CSW12_08455 PF17764 3′ DNA-binding domain (3′BD) CSW12_08455 PF00271 Helicase conserved C-terminal domain CSW12_08455 PF18074 Primosomal protein N C-terminal domain CSW12_08460 PF01327 Polypeptide deformylase CSW12_08465 PF02911 Formyl transferase, C-terminal domain CSW12_08465 PF00551 Formyl transferase CSW12_08470 PF01029 NusB family CSW12_08470 PF01189 16S rRNA methyltransferase RsmB/F CSW12_08475 PF04055 Radical SAM superfamily CSW12_08485 PF03793 PASTA domain CSW12_08485 PF00069 Protein kinase domain CSW12_08490 PF03193 RsgA GTPase CSW12_08490 PF16745 RsgA N-terminal domain CSW12_08495 PF00834 Ribulose-phosphate 3 epimerase family CSW12_08500 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain CSW12_08500 PF04263 Thiamin pyrophosphokinase, catalytic domain CSW12_08505 PF08183 Stage V sporulation protein family CSW12_08510 PF00830 Ribosomal L28 family CSW12_08515 PF03780 Asp23 family, cell envelope-related function CSW12_08520 PF02734 DAK2 domain CSW12_08520 PF13684 Dihydroxyacetone kinase family CSW12_08525 PF17191 RecG wedge domain CSW12_08525 PF00270 DEAD/DEAH box helicase CSW12_08525 PF00271 Helicase conserved C-terminal domain CSW12_08530 PF03061 Thioesterase superfamily CSW12_08535 PF02504 Fatty acid synthesis protein CSW12_08540 PF00698 Acyl transferase domain CSW12_08550 PF00550 Phosphopantetheine attachment site CSW12_08555 PF14622 Ribonuclease-III-like CSW12_08555 PF00035 Double-stranded RNA binding motif CSW12_08560 PF06470 SMC proteins Flexible Hinge Domain CSW12_08560 PF02463 RecF/RecN/SMC N terminal domain CSW12_08565 PF02881 SRP54-type protein, helical bundle domain CSW12_08565 PF00448 SRP54-type protein, GTPase domain CSW12_08570 PF04297 Putative helix-turn-helix protein, YlxM / p13 like CSW12_08575 PF00448 SRP54-type protein, GTPase domain CSW12_08575 PF02881 SRP54-type protein, helical bundle domain CSW12_08575 PF02978 Signal peptide binding domain CSW12_08580 PF00886 Ribosomal protein S16 CSW12_08590 PF01782 RimM N-terminal domain CSW12_08590 PF05239 PRC-barrel domain CSW12_08595 PF01746 tRNA (Guanine-1)-methyltransferase CSW12_08600 PF01245 Ribosomal protein L19 CSW12_08605 PF10502 Signal peptidase, peptidase S26 CSW12_08610 PF01926 50S ribosome-binding GTPase CSW12_08615 PF01351 Ribonuclease HII CSW12_08620 PF00549 CoA-ligase CSW12_08620 PF08442 ATP-grasp domain CSW12_08625 PF02629 CoA binding domain CSW12_08625 PF00549 CoA-ligase CSW12_08630 PF02481 DNA recombination-mediator protein A CSW12_08635 PF01751 Toprim domain CSW12_08635 PF01396 Topoisomerase DNA binding C4 zinc finger CSW12_08635 PF01131 DNA topoisomerase CSW12_08640 PF01134 Glucose inhibited division protein A CSW12_08645 PF00589 Phage integrase family CSW12_08645 PF02899 Phage integrase, N-terminal SAM-like domain CSW12_08650 PF00227 Proteasome subunit CSW12_08655 PF00004 ATPase family associated with various cellular activities (AAA) CSW12_08655 PF10431 C-terminal, D2-small domain, of ClpB protein CSW12_08655 PF07724 AAA domain (Cdc48 subfamily) CSW12_08660 PF08222 CodY helix-turn-helix domain CSW12_08660 PF06018 CodY GAF-like domain CSW12_08665 PF00318 Ribosomal protein S2 CSW12_08670 PF00889 Elongation factor TS CSW12_08675 PF00696 Amino acid kinase family CSW12_08680 PF01765 Ribosome recycling factor CSW12_08685 PF01255 Putative undecaprenyl diphosphate synthase CSW12_08695 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CSW12_08695 PF13288 DXP reductoisomerase C-terminal domain CSW12_08695 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain CSW12_08700 PF02163 Peptidase family M50 CSW12_08700 PF17820 PDZ domain CSW12_08705 PF03129 Anticodon binding domain CSW12_08705 PF04073 Aminoacyl-tRNA editing domain CSW12_08705 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CSW12_08710 PF00929 Exonuclease CSW12_08710 PF02811 PHP domain CSW12_08710 PF14579 Helix-hairpin-helix motif CSW12_08710 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CSW12_08710 PF07733 Bacterial DNA polymerase III alpha NTPase domain CSW12_08710 PF11490 DNA polymerase III polC-type N-terminus II CSW12_08710 PF14480 DNA polymerase III polC-type N-terminus I CSW12_08715 PF17384 RimP C-terminal SH3 domain CSW12_08715 PF02576 RimP N-terminal domain CSW12_08720 PF00575 S1 RNA binding domain CSW12_08720 PF13184 NusA-like KH domain CSW12_08720 PF08529 NusA N-terminal domain CSW12_08725 PF04296 Protein of unknown function (DUF448) CSW12_08730 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family CSW12_08735 PF00009 Elongation factor Tu GTP binding domain CSW12_08735 PF11987 Translation-initiation factor 2 CSW12_08735 PF04760 Translation initiation factor IF-2, N-terminal region CSW12_08740 PF04456 Protein of unknown function (DUF503) CSW12_08745 PF02033 Ribosome-binding factor A CSW12_08750 PF01509 TruB family pseudouridylate synthase (N terminal domain) CSW12_08750 PF16198 tRNA pseudouridylate synthase B C-terminal domain CSW12_08755 PF01687 Riboflavin kinase CSW12_08755 PF06574 FAD synthetase CSW12_08760 PF00312 Ribosomal protein S15 CSW12_08765 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CSW12_08765 PF01138 3' exoribonuclease family, domain 1 CSW12_08765 PF03725 3' exoribonuclease family, domain 2 CSW12_08765 PF00575 S1 RNA binding domain CSW12_08765 PF00013 KH domain CSW12_08770 PF01522 Polysaccharide deacetylase CSW12_08775 PF05193 Peptidase M16 inactive domain CSW12_08775 PF00675 Insulinase (Peptidase family M16) CSW12_08780 PF05239 PRC-barrel domain CSW12_08785 PF16924 Dipicolinate synthase subunit A N-terminal domain CSW12_08785 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CSW12_08790 PF02441 Flavoprotein CSW12_08795 PF01118 Semialdehyde dehydrogenase, NAD binding domain CSW12_08795 PF02774 Semialdehyde dehydrogenase, dimerisation domain CSW12_08800 PF00696 Amino acid kinase family CSW12_08800 PF13840 ACT domain CSW12_08805 PF00701 Dihydrodipicolinate synthetase family CSW12_08810 PF00753 Metallo-beta-lactamase superfamily CSW12_08810 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CSW12_08810 PF17770 Ribonuclease J C-terminal domain CSW12_08815 PF00574 Clp protease CSW12_08820 PF14035 YlzJ-like protein CSW12_08825 PF09397 Ftsk gamma domain CSW12_08825 PF17854 FtsK alpha domain CSW12_08825 PF01580 FtsK/SpoIIIE family CSW12_08835 PF07702 UTRA domain CSW12_08835 PF00392 Bacterial regulatory proteins, gntR family CSW12_08860 PF05193 Peptidase M16 inactive domain CSW12_08865 PF00675 Insulinase (Peptidase family M16) CSW12_08865 PF05193 Peptidase M16 inactive domain CSW12_08875 PF11588 Protein of unknown function (DUF3243) CSW12_08880 PF11868 Protein of unknown function (DUF3388) CSW12_08885 PF13464 Domain of unknown function (DUF4115) CSW12_08890 PF01066 CDP-alcohol phosphatidyltransferase CSW12_08895 PF02464 Competence-damaged protein CSW12_08895 PF18146 Damage-inducible protein CinA KH domain CSW12_08895 PF00994 Probable molybdopterin binding domain CSW12_08900 PF00154 recA bacterial DNA recombination protein CSW12_08910 PF01966 HD domain CSW12_08910 PF12072 Domain of unknown function (DUF3552) CSW12_08910 PF00013 KH domain CSW12_08915 PF13277 YmdB-like protein CSW12_08920 PF04232 Stage V sporulation protein S (SpoVS) CSW12_08925 PF01244 Membrane dipeptidase (Peptidase family M19) CSW12_08930 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II CSW12_08930 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg CSW12_08930 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase CSW12_08935 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CSW12_08940 PF04055 Radical SAM superfamily CSW12_08940 PF01938 TRAM domain CSW12_08940 PF00919 Uncharacterized protein family UPF0004 CSW12_08945 PF06133 Control of competence regulator ComK, YlbF/YmcA CSW12_08950 PF10628 Outer spore coat protein E (CotE) CSW12_08955 PF05192 MutS domain III CSW12_08955 PF05190 MutS family domain IV CSW12_08955 PF00488 MutS domain V CSW12_08955 PF01624 MutS domain I CSW12_08955 PF05188 MutS domain II CSW12_08960 PF08676 MutL C terminal dimerisation domain CSW12_08960 PF01119 DNA mismatch repair protein, C-terminal domain CSW12_08970 PF00350 Dynamin family CSW12_08975 PF00884 Sulfatase CSW12_08990 PF07486 Cell Wall Hydrolase CSW12_08995 PF00082 Subtilase family CSW12_09000 PF00388 Phosphatidylinositol-specific phospholipase C, X domain CSW12_09005 PF00232 Glycosyl hydrolase family 1 CSW12_09010 PF00392 Bacterial regulatory proteins, gntR family CSW12_09010 PF07702 UTRA domain CSW12_09020 PF00155 Aminotransferase class I and II CSW12_09020 PF00392 Bacterial regulatory proteins, gntR family CSW12_09025 PF03788 LrgA family CSW12_09030 PF04172 LrgB-like family CSW12_09035 PF10787 Uncharacterised protein from bacillus cereus group CSW12_09050 PF02719 Polysaccharide biosynthesis protein CSW12_09050 PF08485 Polysaccharide biosynthesis protein C-terminal CSW12_09055 PF16363 GDP-mannose 4,6 dehydratase CSW12_09065 PF03033 Glycosyltransferase family 28 N-terminal domain CSW12_09065 PF04101 Glycosyltransferase family 28 C-terminal domain CSW12_09070 PF03707 Bacterial signalling protein N terminal repeat CSW12_09070 PF00990 Diguanylate cyclase, GGDEF domain CSW12_09070 PF00563 EAL domain CSW12_09075 PF00561 alpha/beta hydrolase fold CSW12_09095 PF01546 Peptidase family M20/M25/M40 CSW12_09095 PF07687 Peptidase dimerisation domain CSW12_09100 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain CSW12_09100 PF00730 HhH-GPD superfamily base excision DNA repair protein CSW12_09105 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CSW12_09105 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CSW12_09110 PF02805 Metal binding domain of Ada CSW12_09110 PF12833 Helix-turn-helix domain CSW12_09115 PF03372 Endonuclease/Exonuclease/phosphatase family CSW12_09120 PF01497 Periplasmic binding protein CSW12_09125 PF01032 FecCD transport family CSW12_09130 PF01032 FecCD transport family CSW12_09135 PF00005 ABC transporter CSW12_09140 PF00756 Putative esterase CSW12_09150 PF02583 Metal-sensitive transcriptional repressor CSW12_09155 PF00403 Heavy-metal-associated domain CSW12_09160 PF00403 Heavy-metal-associated domain CSW12_09170 PF00216 Bacterial DNA-binding protein CSW12_09175 PF01226 Formate/nitrite transporter CSW12_09180 PF00149 Calcineurin-like phosphoesterase CSW12_09180 PF10518 TAT (twin-arginine translocation) pathway signal sequence CSW12_09190 PF00704 Glycosyl hydrolases family 18 CSW12_09190 PF00041 Fibronectin type III domain CSW12_09200 PF00324 Amino acid permease CSW12_09215 PF04238 Protein of unknown function (DUF420) CSW12_09220 PF00465 Iron-containing alcohol dehydrogenase CSW12_09225 PF08220 DeoR-like helix-turn-helix domain CSW12_09225 PF00455 DeoR C terminal sensor domain CSW12_09230 PF00294 pfkB family carbohydrate kinase CSW12_09235 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CSW12_09235 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CSW12_09245 PF06725 3D domain CSW12_09245 PF01476 LysM domain CSW12_09260 PF17209 Hfq protein CSW12_09275 PF00004 ATPase family associated with various cellular activities (AAA) CSW12_09275 PF17866 AAA lid domain CSW12_09280 PF03458 UPF0126 domain CSW12_09285 PF16360 GTP-binding GTPase Middle Region CSW12_09285 PF01926 50S ribosome-binding GTPase CSW12_09285 PF13167 GTP-binding GTPase N-terminal CSW12_09290 PF06838 Methionine gamma-lyase CSW12_09295 PF13411 MerR HTH family regulatory protein CSW12_09300 PF03951 Glutamine synthetase, beta-Grasp domain CSW12_09300 PF00120 Glutamine synthetase, catalytic domain CSW12_09305 PF03551 Transcriptional regulator PadR-like family CSW12_09320 PF01726 LexA DNA binding domain CSW12_09320 PF00717 Peptidase S24-like CSW12_09325 PF00239 Resolvase, N terminal domain CSW12_09330 PF05979 Bacterial protein of unknown function (DUF896) CSW12_09335 PF00149 Calcineurin-like phosphoesterase CSW12_09335 PF02872 5'-nucleotidase, C-terminal domain CSW12_09340 PF00497 Bacterial extracellular solute-binding proteins, family 3 CSW12_09345 PF00005 ABC transporter CSW12_09350 PF00528 Binding-protein-dependent transport system inner membrane component CSW12_09355 PF00528 Binding-protein-dependent transport system inner membrane component CSW12_09360 PF00456 Transketolase, thiamine diphosphate binding domain CSW12_09360 PF02779 Transketolase, pyrimidine binding domain CSW12_09360 PF02780 Transketolase, C-terminal domain CSW12_09365 PF10747 Sporulation inhibitor of replication protein SirA CSW12_09370 PF03672 Uncharacterised protein family (UPF0154) CSW12_09375 PF00664 ABC transporter transmembrane region CSW12_09375 PF00005 ABC transporter CSW12_09380 PF00664 ABC transporter transmembrane region CSW12_09380 PF00005 ABC transporter CSW12_09385 PF01183 Glycosyl hydrolases family 25 CSW12_09385 PF08239 Bacterial SH3 domain CSW12_09405 PF01925 Sulfite exporter TauE/SafE CSW12_09415 PF00293 NUDIX domain CSW12_09415 PF13344 Haloacid dehalogenase-like hydrolase CSW12_09420 PF04172 LrgB-like family CSW12_09425 PF03788 LrgA family CSW12_09430 PF03466 LysR substrate binding domain CSW12_09430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSW12_09445 PF00005 ABC transporter CSW12_09470 PF02683 Cytochrome C biogenesis protein transmembrane region CSW12_09475 PF07301 Protein of unknown function (DUF1453) CSW12_09480 PF11084 Protein of unknown function (DUF2621) CSW12_09505 PF01209 ubiE/COQ5 methyltransferase family CSW12_09510 PF09021 HutP CSW12_09515 PF00221 Aromatic amino acid lyase CSW12_09520 PF17391 Urocanase N-terminal domain CSW12_09520 PF17392 Urocanase C-terminal domain CSW12_09520 PF01175 Urocanase Rossmann-like domain CSW12_09525 PF01979 Amidohydrolase family CSW12_09530 PF00491 Arginase family CSW12_09535 PF02559 CarD-like/TRCF domain CSW12_09540 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CSW12_09545 PF01645 Conserved region in glutamate synthase CSW12_09555 PF00474 Sodium:solute symporter family CSW12_09560 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CSW12_09565 PF01738 Dienelactone hydrolase family CSW12_09570 PF13188 PAS domain CSW12_09570 PF00989 PAS fold CSW12_09570 PF13426 PAS domain CSW12_09570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSW12_09570 PF00512 His Kinase A (phospho-acceptor) domain CSW12_09585 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CSW12_09585 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CSW12_09605 PF05532 CsbD-like CSW12_09630 PF01381 Helix-turn-helix CSW12_09635 PF00501 AMP-binding enzyme CSW12_09635 PF13193 AMP-binding enzyme C-terminal domain CSW12_09640 PF02632 BioY family CSW12_09645 PF13193 AMP-binding enzyme C-terminal domain CSW12_09645 PF00501 AMP-binding enzyme CSW12_09650 PF00108 Thiolase, N-terminal domain CSW12_09650 PF02803 Thiolase, C-terminal domain CSW12_09660 PF00293 NUDIX domain CSW12_09660 PF13344 Haloacid dehalogenase-like hydrolase CSW12_09665 PF01411 tRNA synthetases class II (A) CSW12_09665 PF02272 DHHA1 domain CSW12_09665 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CSW12_09675 PF07690 Major Facilitator Superfamily CSW12_09685 PF08179 Small acid-soluble spore protein P family CSW12_09695 PF01522 Polysaccharide deacetylase CSW12_09705 PF00694 Aconitase C-terminal domain CSW12_09705 PF00330 Aconitase family (aconitate hydratase) CSW12_09710 PF00005 ABC transporter CSW12_09710 PF00664 ABC transporter transmembrane region CSW12_09710 PF03412 Peptidase C39 family CSW12_09720 PF00578 AhpC/TSA family CSW12_09725 PF00929 Exonuclease CSW12_09725 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CSW12_09725 PF14579 Helix-hairpin-helix motif CSW12_09725 PF01336 OB-fold nucleic acid binding domain CSW12_09725 PF02811 PHP domain CSW12_09725 PF07733 Bacterial DNA polymerase III alpha NTPase domain CSW12_09725 PF11490 DNA polymerase III polC-type N-terminus II CSW12_09730 PF13040 Fur-regulated basic protein B CSW12_09735 PF08177 Small acid-soluble spore protein N family CSW12_09740 PF00704 Glycosyl hydrolases family 18 CSW12_09740 PF01476 LysM domain CSW12_09745 PF03061 Thioesterase superfamily CSW12_09750 PF01521 Iron-sulphur cluster biosynthesis CSW12_09755 PF02660 Glycerol-3-phosphate acyltransferase CSW12_09760 PF03477 ATP cone domain CSW12_09760 PF13597 Anaerobic ribonucleoside-triphosphate reductase CSW12_09765 PF04055 Radical SAM superfamily CSW12_09770 PF00486 Transcriptional regulatory protein, C terminal CSW12_09770 PF00072 Response regulator receiver domain CSW12_09775 PF13180 PDZ domain CSW12_09780 PF13380 CoA binding domain CSW12_09790 PF00204 DNA gyrase B CSW12_09790 PF01751 Toprim domain CSW12_09790 PF00986 DNA gyrase B subunit, carboxyl terminus CSW12_09790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSW12_09795 PF00521 DNA gyrase/topoisomerase IV, subunit A CSW12_09795 PF03989 DNA gyrase C-terminal domain, beta-propeller CSW12_09800 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CSW12_09800 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CSW12_09820 PF00005 ABC transporter CSW12_09820 PF13732 Domain of unknown function (DUF4162) CSW12_09830 PF08281 Sigma-70, region 4 CSW12_09830 PF04542 Sigma-70 region 2 CSW12_09840 PF03816 Cell envelope-related transcriptional attenuator domain CSW12_09845 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CSW12_09850 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CSW12_09855 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CSW12_09860 PF08241 Methyltransferase domain CSW12_09895 PF13520 Amino acid permease CSW12_09910 PF03323 Bacillus/Clostridium GerA spore germination protein CSW12_09920 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CSW12_09920 PF01568 Molydopterin dinucleotide binding domain CSW12_09920 PF00384 Molybdopterin oxidoreductase CSW12_09920 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CSW12_09920 PF00037 4Fe-4S binding domain CSW12_09925 PF07849 Protein of unknown function (DUF1641) CSW12_09930 PF10057 Uncharacterized conserved protein (DUF2294) CSW12_09935 PF02634 FdhD/NarQ family CSW12_09940 PF06463 Molybdenum Cofactor Synthesis C CSW12_09940 PF04055 Radical SAM superfamily CSW12_09950 PF01226 Formate/nitrite transporter CSW12_09955 PF00899 ThiF family CSW12_09960 PF00994 Probable molybdopterin binding domain CSW12_09960 PF03454 MoeA C-terminal region (domain IV) CSW12_09960 PF03453 MoeA N-terminal region (domain I and II) CSW12_09965 PF02391 MoaE protein CSW12_09975 PF10609 NUBPL iron-transfer P-loop NTPase CSW12_09990 PF06961 Protein of unknown function (DUF1294) CSW12_09995 PF00892 EamA-like transporter family CSW12_10000 PF02681 Divergent PAP2 family CSW12_10005 PF13249 Squalene-hopene cyclase N-terminal domain CSW12_10005 PF13243 Squalene-hopene cyclase C-terminal domain CSW12_10020 PF00171 Aldehyde dehydrogenase family CSW12_10030 PF00474 Sodium:solute symporter family CSW12_10035 PF01156 Inosine-uridine preferring nucleoside hydrolase CSW12_10045 PF14698 Argininosuccinate lyase C-terminal CSW12_10045 PF00206 Lyase CSW12_10055 PF00106 short chain dehydrogenase CSW12_10065 PF00132 Bacterial transferase hexapeptide (six repeats) CSW12_10085 PF00258 Flavodoxin CSW12_10095 PF00313 'Cold-shock' DNA-binding domain CSW12_10110 PF13037 Domain of unknown function (DUF3898) CSW12_10110 PF13039 Protein of unknown function (DUF3900) CSW12_10120 PF04294 VanW like protein CSW12_10125 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CSW12_10140 PF02308 MgtC family CSW12_10145 PF18496 Collagenase G catalytic helper subdomain CSW12_10145 PF01752 Collagenase CSW12_10145 PF08453 Peptidase family M9 N-terminal CSW12_10150 PF00989 PAS fold CSW12_10150 PF00512 His Kinase A (phospho-acceptor) domain CSW12_10150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSW12_10170 PF01348 Type II intron maturase CSW12_10170 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CSW12_10190 PF02557 D-alanyl-D-alanine carboxypeptidase CSW12_10195 PF01520 N-acetylmuramoyl-L-alanine amidase CSW12_10195 PF00395 S-layer homology domain CSW12_10200 PF07968 Leukocidin/Hemolysin toxin family CSW12_10205 PF00440 Bacterial regulatory proteins, tetR family CSW12_10215 PF00990 Diguanylate cyclase, GGDEF domain CSW12_10215 PF00563 EAL domain CSW12_10215 PF03707 Bacterial signalling protein N terminal repeat CSW12_10230 PF00041 Fibronectin type III domain CSW12_10230 PF00553 Cellulose binding domain CSW12_10230 PF00704 Glycosyl hydrolases family 18 CSW12_10240 PF00082 Subtilase family CSW12_10270 PF02743 Cache domain CSW12_10270 PF00672 HAMP domain CSW12_10270 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CSW12_10285 PF16363 GDP-mannose 4,6 dehydratase CSW12_10290 PF01370 NAD dependent epimerase/dehydratase family CSW12_10300 PF00483 Nucleotidyl transferase CSW12_10320 PF03323 Bacillus/Clostridium GerA spore germination protein CSW12_10340 PF18416 N-acetylglucosamine binding protein domain 2 CSW12_10340 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading CSW12_10345 PF00388 Phosphatidylinositol-specific phospholipase C, X domain CSW12_10365 PF00581 Rhodanese-like domain CSW12_10365 PF00753 Metallo-beta-lactamase superfamily CSW12_10380 PF01066 CDP-alcohol phosphatidyltransferase CSW12_10405 PF02913 FAD linked oxidases, C-terminal domain CSW12_10405 PF01565 FAD binding domain CSW12_10410 PF01758 Sodium Bile acid symporter family CSW12_10420 PF18801 response regulator aspartate phosphatase H, N terminal CSW12_10430 PF02696 Uncharacterized ACR, YdiU/UPF0061 family CSW12_10435 PF00107 Zinc-binding dehydrogenase CSW12_10435 PF08240 Alcohol dehydrogenase GroES-like domain CSW12_10440 PF01022 Bacterial regulatory protein, arsR family CSW12_10445 PF01494 FAD binding domain CSW12_10450 PF03009 Glycerophosphoryl diester phosphodiesterase family CSW12_10460 PF03466 LysR substrate binding domain CSW12_10460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSW12_10475 PF00144 Beta-lactamase CSW12_10480 PF04371 Porphyromonas-type peptidyl-arginine deiminase CSW12_10485 PF06146 Phosphate-starvation-inducible E CSW12_10505 PF04371 Porphyromonas-type peptidyl-arginine deiminase CSW12_10510 PF01432 Peptidase family M3 CSW12_10510 PF08439 Oligopeptidase F CSW12_10515 PF00797 N-acetyltransferase CSW12_10520 PF09154 Domain of unknown function (DUF1939) CSW12_10520 PF00128 Alpha amylase, catalytic domain CSW12_10545 PF00107 Zinc-binding dehydrogenase CSW12_10545 PF08240 Alcohol dehydrogenase GroES-like domain CSW12_10550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSW12_10550 PF03466 LysR substrate binding domain CSW12_10560 PF10901 Protein of unknown function (DUF2690) CSW12_10565 PF13302 Acetyltransferase (GNAT) domain CSW12_10585 PF13170 Protein of unknown function (DUF4003) CSW12_10590 PF05675 Protein of unknown function (DUF817) CSW12_10595 PF01032 FecCD transport family CSW12_10600 PF01032 FecCD transport family CSW12_10605 PF01497 Periplasmic binding protein CSW12_10620 PF03600 Citrate transporter CSW12_10625 PF08830 Protein of unknown function (DUF1806) CSW12_10630 PF02585 GlcNAc-PI de-N-acetylase CSW12_10665 PF07690 Major Facilitator Superfamily CSW12_10670 PF00324 Amino acid permease CSW12_10675 PF08240 Alcohol dehydrogenase GroES-like domain CSW12_10675 PF00107 Zinc-binding dehydrogenase CSW12_10680 PF00753 Metallo-beta-lactamase superfamily CSW12_10720 PF00144 Beta-lactamase CSW12_10745 PF00753 Metallo-beta-lactamase superfamily CSW12_10755 PF03063 Prismane/CO dehydrogenase family CSW12_10770 PF13732 Domain of unknown function (DUF4162) CSW12_10770 PF00005 ABC transporter CSW12_10775 PF01061 ABC-2 type transporter CSW12_10810 PF01810 LysE type translocator CSW12_10815 PF00535 Glycosyl transferase family 2 CSW12_10815 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 CSW12_10820 PF04542 Sigma-70 region 2 CSW12_10825 PF12791 Anti-sigma factor N-terminus CSW12_10830 PF01522 Polysaccharide deacetylase CSW12_10830 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain CSW12_10835 PF01022 Bacterial regulatory protein, arsR family CSW12_10840 PF01638 HxlR-like helix-turn-helix CSW12_10845 PF02525 Flavodoxin-like fold CSW12_10850 PF13193 AMP-binding enzyme C-terminal domain CSW12_10850 PF00501 AMP-binding enzyme CSW12_10865 PF13537 Glutamine amidotransferase domain CSW12_10865 PF00733 Asparagine synthase CSW12_10895 PF00005 ABC transporter CSW12_10945 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CSW12_10945 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CSW12_10950 PF07702 UTRA domain CSW12_10950 PF00392 Bacterial regulatory proteins, gntR family CSW12_10960 PF03960 ArsC family CSW12_11000 PF00916 Sulfate permease family CSW12_11000 PF01740 STAS domain CSW12_11005 PF03831 PhnA domain CSW12_11005 PF08274 PhnA Zinc-Ribbon CSW12_11025 PF03928 Haem-degrading CSW12_11035 PF00107 Zinc-binding dehydrogenase CSW12_11035 PF16197 Ketoacyl-synthetase C-terminal extension CSW12_11035 PF00698 Acyl transferase domain CSW12_11035 PF08659 KR domain CSW12_11035 PF02801 Beta-ketoacyl synthase, C-terminal domain CSW12_11035 PF00550 Phosphopantetheine attachment site CSW12_11035 PF14765 Polyketide synthase dehydratase CSW12_11035 PF00109 Beta-ketoacyl synthase, N-terminal domain CSW12_11035 PF08240 Alcohol dehydrogenase GroES-like domain CSW12_11045 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain CSW12_11045 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain CSW12_11050 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain CSW12_11050 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain CSW12_11055 PF02779 Transketolase, pyrimidine binding domain CSW12_11055 PF00456 Transketolase, thiamine diphosphate binding domain CSW12_11055 PF02780 Transketolase, C-terminal domain CSW12_11060 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CSW12_11060 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain CSW12_11065 PF00923 Transaldolase/Fructose-6-phosphate aldolase CSW12_11070 PF02447 GntP family permease CSW12_11090 PF10282 Lactonase, 7-bladed beta-propeller CSW12_11095 PF06906 Protein of unknown function (DUF1272) CSW12_11100 PF00805 Pentapeptide repeats (8 copies) CSW12_11110 PF00892 EamA-like transporter family CSW12_11120 PF01370 NAD dependent epimerase/dehydratase family CSW12_11125 PF08484 C-methyltransferase C-terminal domain CSW12_11125 PF08421 Putative zinc binding domain CSW12_11130 PF16363 GDP-mannose 4,6 dehydratase CSW12_11135 PF00483 Nucleotidyl transferase CSW12_11145 PF13411 MerR HTH family regulatory protein CSW12_11150 PF01595 Cyclin M transmembrane N-terminal domain CSW12_11150 PF03471 Transporter associated domain CSW12_11150 PF00571 CBS domain CSW12_11160 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CSW12_11180 PF07690 Major Facilitator Superfamily CSW12_11190 PF08003 Protein of unknown function (DUF1698) CSW12_11220 PF01594 AI-2E family transporter CSW12_11225 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain CSW12_11225 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CSW12_11225 PF13288 DXP reductoisomerase C-terminal domain CSW12_11230 PF00579 tRNA synthetases class I (W and Y) CSW12_11235 PF14602 Hexapeptide repeat of succinyl-transferase CSW12_11235 PF12464 Maltose acetyltransferase CSW12_11240 PF07690 Major Facilitator Superfamily CSW12_11245 PF00480 ROK family CSW12_11250 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CSW12_11260 PF13344 Haloacid dehalogenase-like hydrolase CSW12_11260 PF00293 NUDIX domain CSW12_11285 PF13419 Haloacid dehalogenase-like hydrolase CSW12_11310 PF00005 ABC transporter CSW12_11345 PF00224 Pyruvate kinase, barrel domain CSW12_11345 PF02887 Pyruvate kinase, alpha/beta domain CSW12_11345 PF00391 PEP-utilising enzyme, mobile domain CSW12_11355 PF00881 Nitroreductase family CSW12_11360 PF01638 HxlR-like helix-turn-helix CSW12_11375 PF03129 Anticodon binding domain CSW12_11375 PF13393 Histidyl-tRNA synthetase CSW12_11380 PF04073 Aminoacyl-tRNA editing domain CSW12_11390 PF01381 Helix-turn-helix CSW12_11400 PF01048 Phosphorylase superfamily CSW12_11415 PF04231 Endonuclease I CSW12_11420 PF03606 C4-dicarboxylate anaerobic carrier CSW12_11425 PF03737 Aldolase/RraA CSW12_11445 PF00005 ABC transporter CSW12_11455 PF14256 YwiC-like protein CSW12_11475 PF02525 Flavodoxin-like fold CSW12_11485 PF02667 Short chain fatty acid transporter CSW12_11495 PF13396 Phospholipase_D-nuclease N-terminal CSW12_11500 PF13732 Domain of unknown function (DUF4162) CSW12_11500 PF00005 ABC transporter CSW12_11505 PF12679 ABC-2 family transporter protein CSW12_11515 PF07690 Major Facilitator Superfamily CSW12_11520 PF01047 MarR family CSW12_11525 PF12697 Alpha/beta hydrolase family CSW12_11535 PF07690 Major Facilitator Superfamily CSW12_11540 PF14044 NETI protein CSW12_11545 PF09587 Bacterial capsule synthesis protein PGA_cap CSW12_11550 PF02557 D-alanyl-D-alanine carboxypeptidase CSW12_11570 PF01510 N-acetylmuramoyl-L-alanine amidase CSW12_11570 PF01476 LysM domain CSW12_11570 PF01471 Putative peptidoglycan binding domain CSW12_11595 PF01804 Penicillin amidase CSW12_11600 PF12833 Helix-turn-helix domain CSW12_11600 PF01497 Periplasmic binding protein CSW12_11610 PF07883 Cupin domain CSW12_11625 PF00266 Aminotransferase class-V CSW12_11630 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CSW12_11630 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CSW12_11630 PF01842 ACT domain CSW12_11650 PF17676 LD-carboxypeptidase C-terminal domain CSW12_11650 PF02016 LD-carboxypeptidase N-terminal domain CSW12_11660 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CSW12_11660 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CSW12_11665 PF00486 Transcriptional regulatory protein, C terminal CSW12_11665 PF00072 Response regulator receiver domain CSW12_11670 PF00672 HAMP domain CSW12_11670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSW12_11670 PF00512 His Kinase A (phospho-acceptor) domain CSW12_11690 PF02687 FtsX-like permease family CSW12_11695 PF00005 ABC transporter CSW12_11710 PF04072 Leucine carboxyl methyltransferase CSW12_11720 PF01139 tRNA-splicing ligase RtcB CSW12_11730 PF00291 Pyridoxal-phosphate dependent enzyme CSW12_11745 PF00326 Prolyl oligopeptidase family CSW12_11755 PF07690 Major Facilitator Superfamily CSW12_11760 PF00667 FAD binding domain CSW12_11760 PF00175 Oxidoreductase NAD-binding domain CSW12_11760 PF00067 Cytochrome P450 CSW12_11760 PF00258 Flavodoxin CSW12_11780 PF00486 Transcriptional regulatory protein, C terminal CSW12_11780 PF00072 Response regulator receiver domain CSW12_11785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSW12_11785 PF00512 His Kinase A (phospho-acceptor) domain CSW12_11800 PF12389 Camelysin metallo-endopeptidase CSW12_11810 PF04542 Sigma-70 region 2 CSW12_11810 PF08281 Sigma-70, region 4 CSW12_11840 PF02574 Homocysteine S-methyltransferase CSW12_11845 PF00324 Amino acid permease CSW12_11860 PF00905 Penicillin binding protein transpeptidase domain CSW12_11860 PF00912 Transglycosylase CSW12_11880 PF00072 Response regulator receiver domain CSW12_11880 PF00196 Bacterial regulatory proteins, luxR family CSW12_11910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSW12_11910 PF00512 His Kinase A (phospho-acceptor) domain CSW12_11910 PF00672 HAMP domain CSW12_11915 PF00072 Response regulator receiver domain CSW12_11915 PF00486 Transcriptional regulatory protein, C terminal CSW12_11935 PF12802 MarR family CSW12_11945 PF08803 Putative mono-oxygenase ydhR CSW12_11950 PF00144 Beta-lactamase CSW12_11955 PF00144 Beta-lactamase CSW12_11970 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CSW12_11985 PF01037 Lrp/AsnC ligand binding domain CSW12_11995 PF18665 Tetracyclin repressor-like, C-terminal domain CSW12_11995 PF00440 Bacterial regulatory proteins, tetR family CSW12_12000 PF00550 Phosphopantetheine attachment site CSW12_12000 PF07993 Male sterility protein CSW12_12005 PF01022 Bacterial regulatory protein, arsR family CSW12_12010 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CSW12_12015 PF01758 Sodium Bile acid symporter family CSW12_12020 PF01451 Low molecular weight phosphotyrosine protein phosphatase CSW12_12025 PF01040 UbiA prenyltransferase family CSW12_12035 PF01522 Polysaccharide deacetylase CSW12_12055 PF07690 Major Facilitator Superfamily CSW12_12060 PF10057 Uncharacterized conserved protein (DUF2294) CSW12_12065 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CSW12_12065 PF00361 Proton-conducting membrane transporter CSW12_12070 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) CSW12_12080 PF07859 alpha/beta hydrolase fold CSW12_12090 PF07690 Major Facilitator Superfamily CSW12_12100 PF00875 DNA photolyase CSW12_12100 PF03441 FAD binding domain of DNA photolyase CSW12_12105 PF03073 TspO/MBR family CSW12_12120 PF13026 Protein of unknown function (DUF3887) CSW12_12120 PF12146 Serine aminopeptidase, S33 CSW12_12125 PF11181 Heat induced stress protein YflT CSW12_12140 PF01544 CorA-like Mg2+ transporter protein CSW12_12145 PF01047 MarR family CSW12_12165 PF01979 Amidohydrolase family CSW12_12180 PF00857 Isochorismatase family CSW12_12185 PF00561 alpha/beta hydrolase fold CSW12_12195 PF17936 Bacterial Ig domain CSW12_12195 PF00149 Calcineurin-like phosphoesterase CSW12_12195 PF02872 5'-nucleotidase, C-terminal domain CSW12_12205 PF00144 Beta-lactamase CSW12_12210 PF11799 impB/mucB/samB family C-terminal domain CSW12_12210 PF00817 impB/mucB/samB family CSW12_12210 PF11798 IMS family HHH motif CSW12_12220 PF08240 Alcohol dehydrogenase GroES-like domain CSW12_12220 PF13823 Alcohol dehydrogenase GroES-associated CSW12_12220 PF00107 Zinc-binding dehydrogenase CSW12_12225 PF00269 Small, acid-soluble spore proteins, alpha/beta type CSW12_12230 PF11553 Protein of unknown function (DUF3231) CSW12_12235 PF10710 Protein of unknown function (DUF2512) CSW12_12240 PF00753 Metallo-beta-lactamase superfamily CSW12_12245 PF00391 PEP-utilising enzyme, mobile domain CSW12_12245 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CSW12_12250 PF00440 Bacterial regulatory proteins, tetR family CSW12_12265 PF02915 Rubrerythrin CSW12_12270 PF10903 Protein of unknown function (DUF2691) CSW12_12300 PF08028 Acyl-CoA dehydrogenase, C-terminal domain CSW12_12300 PF02770 Acyl-CoA dehydrogenase, middle domain CSW12_12300 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CSW12_12315 PF03932 CutC family CSW12_12320 PF10502 Signal peptidase, peptidase S26 CSW12_12325 PF01614 Bacterial transcriptional regulator CSW12_12325 PF09339 IclR helix-turn-helix domain CSW12_12330 PF02682 Carboxyltransferase domain, subdomain C and D CSW12_12335 PF02626 Carboxyltransferase domain, subdomain A and B CSW12_12340 PF03746 LamB/YcsF family CSW12_12355 PF01470 Pyroglutamyl peptidase CSW12_12360 PF02146 Sir2 family CSW12_12370 PF10502 Signal peptidase, peptidase S26 CSW12_12375 PF04989 Cephalosporin hydroxylase CSW12_12385 PF00293 NUDIX domain CSW12_12405 PF02687 FtsX-like permease family CSW12_12405 PF12704 MacB-like periplasmic core domain CSW12_12405 PF00005 ABC transporter CSW12_12415 PF00486 Transcriptional regulatory protein, C terminal CSW12_12415 PF00072 Response regulator receiver domain CSW12_12430 PF08713 DNA alkylation repair enzyme CSW12_12440 PF00324 Amino acid permease CSW12_12455 PF01925 Sulfite exporter TauE/SafE CSW12_12475 PF13673 Acetyltransferase (GNAT) domain CSW12_12475 PF04229 GrpB protein CSW12_12485 PF13031 Protein of unknown function (DUF3892) CSW12_12490 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 CSW12_12495 PF00392 Bacterial regulatory proteins, gntR family CSW12_12495 PF00155 Aminotransferase class I and II CSW12_12500 PF00892 EamA-like transporter family CSW12_12515 PF00583 Acetyltransferase (GNAT) family CSW12_12520 PF12833 Helix-turn-helix domain CSW12_12540 PF16363 GDP-mannose 4,6 dehydratase CSW12_12545 PF05406 WGR domain CSW12_12550 PF00293 NUDIX domain CSW12_12560 PF14492 Elongation Factor G, domain II CSW12_12560 PF00009 Elongation factor Tu GTP binding domain CSW12_12560 PF03764 Elongation factor G, domain IV CSW12_12560 PF00679 Elongation factor G C-terminus CSW12_12570 PF01047 MarR family CSW12_12575 PF00881 Nitroreductase family CSW12_12585 PF17863 AAA lid domain CSW12_12585 PF07726 ATPase family associated with various cellular activities (AAA) CSW12_12605 PF00144 Beta-lactamase CSW12_12610 PF01979 Amidohydrolase family CSW12_12610 PF13382 Adenine deaminase C-terminal domain CSW12_12620 PF08453 Peptidase family M9 N-terminal CSW12_12620 PF04151 Bacterial pre-peptidase C-terminal domain CSW12_12620 PF18496 Collagenase G catalytic helper subdomain CSW12_12620 PF01752 Collagenase CSW12_12625 PF06628 Catalase-related immune-responsive CSW12_12625 PF00199 Catalase CSW12_12635 PF07690 Major Facilitator Superfamily CSW12_12650 PF07726 ATPase family associated with various cellular activities (AAA) CSW12_12650 PF17863 AAA lid domain CSW12_12675 PF12681 Glyoxalase-like domain CSW12_12680 PF13302 Acetyltransferase (GNAT) domain CSW12_12705 PF13443 Cro/C1-type HTH DNA-binding domain CSW12_12710 PF11188 Protein of unknown function (DUF2975) CSW12_12715 PF00245 Alkaline phosphatase CSW12_12720 PF04294 VanW like protein CSW12_12725 PF05547 Immune inhibitor A peptidase M6 CSW12_12730 PF00487 Fatty acid desaturase CSW12_12745 PF00324 Amino acid permease CSW12_12755 PF01614 Bacterial transcriptional regulator CSW12_12755 PF09339 IclR helix-turn-helix domain CSW12_12760 PF01546 Peptidase family M20/M25/M40 CSW12_12765 PF14748 Pyrroline-5-carboxylate reductase dimerisation CSW12_12765 PF03807 NADP oxidoreductase coenzyme F420-dependent CSW12_12775 PF00696 Amino acid kinase family CSW12_12775 PF01472 PUA domain CSW12_12780 PF00171 Aldehyde dehydrogenase family CSW12_12785 PF01773 Na+ dependent nucleoside transporter N-terminus CSW12_12785 PF07662 Na+ dependent nucleoside transporter C-terminus CSW12_12800 PF03992 Antibiotic biosynthesis monooxygenase CSW12_12815 PF01791 DeoC/LacD family aldolase CSW12_12825 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CSW12_12825 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CSW12_12830 PF04198 Putative sugar-binding domain CSW12_12830 PF00325 Bacterial regulatory proteins, crp family CSW12_12835 PF00005 ABC transporter CSW12_12840 PF02653 Branched-chain amino acid transport system / permease component CSW12_12845 PF02653 Branched-chain amino acid transport system / permease component CSW12_12850 PF13407 Periplasmic binding protein domain CSW12_12855 PF06039 Malate:quinone oxidoreductase (Mqo) CSW12_12875 PF08031 Berberine and berberine like CSW12_12875 PF01565 FAD binding domain CSW12_12890 PF01476 LysM domain CSW12_12890 PF06725 3D domain CSW12_12905 PF01636 Phosphotransferase enzyme family CSW12_12915 PF04986 Putative transposase CSW12_12915 PF14319 Transposase zinc-binding domain CSW12_12930 PF00793 DAHP synthetase I family CSW12_12930 PF01817 Chorismate mutase type II CSW12_12940 PF01264 Chorismate synthase CSW12_12945 PF00155 Aminotransferase class I and II CSW12_12950 PF02153 Prephenate dehydrogenase CSW12_12950 PF01842 ACT domain CSW12_12955 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CSW12_12965 PF16295 Tetracyclin repressor-like, C-terminal domain CSW12_12965 PF00440 Bacterial regulatory proteins, tetR family CSW12_12970 PF03176 MMPL family CSW12_12975 PF12848 ABC transporter CSW12_12975 PF00005 ABC transporter CSW12_12980 PF00884 Sulfatase CSW12_12985 PF03741 Integral membrane protein TerC family CSW12_12995 PF01522 Polysaccharide deacetylase CSW12_13000 PF01965 DJ-1/PfpI family CSW12_13010 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CSW12_13015 PF00291 Pyridoxal-phosphate dependent enzyme CSW12_13020 PF08713 DNA alkylation repair enzyme CSW12_13065 PF02522 Aminoglycoside 3-N-acetyltransferase CSW12_13090 PF00005 ABC transporter CSW12_13095 PF09084 NMT1/THI5 like CSW12_13100 PF00528 Binding-protein-dependent transport system inner membrane component CSW12_13105 PF00296 Luciferase-like monooxygenase CSW12_13120 PF01594 AI-2E family transporter CSW12_13180 PF00005 ABC transporter CSW12_13200 PF03630 Fumble CSW12_13205 PF07977 FabA-like domain CSW12_13210 PF00155 Aminotransferase class I and II CSW12_13250 PF08241 Methyltransferase domain CSW12_13265 PF04226 Transglycosylase associated protein CSW12_13290 PF07690 Major Facilitator Superfamily CSW12_13295 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CSW12_13295 PF12793 Sugar transport-related sRNA regulator N-term CSW12_13300 PF13171 Protein of unknown function (DUF4004) CSW12_13305 PF04519 Polymer-forming cytoskeletal CSW12_13315 PF07690 Major Facilitator Superfamily CSW12_13345 PF07552 Spore Coat Protein X and V domain CSW12_13350 PF02645 Uncharacterised protein, DegV family COG1307 CSW12_13355 PF08439 Oligopeptidase F CSW12_13355 PF01432 Peptidase family M3 CSW12_13360 PF03808 Glycosyl transferase WecB/TagA/CpsF family CSW12_13370 PF01048 Phosphorylase superfamily CSW12_13375 PF13419 Haloacid dehalogenase-like hydrolase CSW12_13390 PF00486 Transcriptional regulatory protein, C terminal CSW12_13390 PF00072 Response regulator receiver domain CSW12_13395 PF00672 HAMP domain CSW12_13395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSW12_13395 PF00512 His Kinase A (phospho-acceptor) domain CSW12_13410 PF02129 X-Pro dipeptidyl-peptidase (S15 family) CSW12_13410 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain CSW12_13435 PF01965 DJ-1/PfpI family CSW12_13440 PF00248 Aldo/keto reductase family CSW12_13455 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CSW12_13455 PF13378 Enolase C-terminal domain-like CSW12_13460 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain CSW12_13460 PF00877 NlpC/P60 family CSW12_13465 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CSW12_13470 PF04914 DltD protein CSW12_13480 PF09335 SNARE associated Golgi protein CSW12_13485 PF08876 Domain of unknown function (DUF1836) CSW12_13505 PF04324 BFD-like [2Fe-2S] binding domain CSW12_13505 PF07992 Pyridine nucleotide-disulphide oxidoreductase CSW12_13515 PF04324 BFD-like [2Fe-2S] binding domain CSW12_13515 PF07992 Pyridine nucleotide-disulphide oxidoreductase CSW12_13520 PF13188 PAS domain CSW12_13520 PF00158 Sigma-54 interaction domain CSW12_13520 PF02954 Bacterial regulatory protein, Fis family CSW12_13525 PF01266 FAD dependent oxidoreductase CSW12_13530 PF05544 Proline racemase CSW12_13535 PF05544 Proline racemase CSW12_13540 PF00701 Dihydrodipicolinate synthetase family CSW12_13545 PF00171 Aldehyde dehydrogenase family CSW12_13550 PF01235 Sodium:alanine symporter family CSW12_13555 PF02627 Carboxymuconolactone decarboxylase family CSW12_13570 PF18416 N-acetylglucosamine binding protein domain 2 CSW12_13570 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading CSW12_13575 PF01368 DHH family CSW12_13575 PF02833 DHHA2 domain CSW12_13630 PF00271 Helicase conserved C-terminal domain CSW12_13630 PF00270 DEAD/DEAH box helicase CSW12_13630 PF00570 HRDC domain CSW12_13630 PF09382 RQC domain CSW12_13630 PF16124 RecQ zinc-binding CSW12_13635 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like CSW12_13645 PF13538 UvrD-like helicase C-terminal domain CSW12_13690 PF04237 YjbR CSW12_13700 PF10990 Protein of unknown function (DUF2809) CSW12_13710 PF03781 Sulfatase-modifying factor enzyme 1 CSW12_13720 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading CSW12_13720 PF18416 N-acetylglucosamine binding protein domain 2 CSW12_13725 PF13673 Acetyltransferase (GNAT) domain CSW12_13730 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) CSW12_13745 PF00574 Clp protease CSW12_13750 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CSW12_13755 PF00571 CBS domain CSW12_13755 PF00005 ABC transporter CSW12_13760 PF00528 Binding-protein-dependent transport system inner membrane component CSW12_13805 PF00106 short chain dehydrogenase CSW12_13815 PF00676 Dehydrogenase E1 component CSW12_13820 PF02779 Transketolase, pyrimidine binding domain CSW12_13820 PF02780 Transketolase, C-terminal domain CSW12_13825 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CSW12_13825 PF00364 Biotin-requiring enzyme CSW12_13825 PF02817 e3 binding domain CSW12_13830 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CSW12_13830 PF07992 Pyridine nucleotide-disulphide oxidoreductase CSW12_13845 PF02082 Transcriptional regulator CSW12_13860 PF08220 DeoR-like helix-turn-helix domain CSW12_13860 PF00455 DeoR C terminal sensor domain CSW12_13865 PF13302 Acetyltransferase (GNAT) domain CSW12_13880 PF01590 GAF domain CSW12_13880 PF00158 Sigma-54 interaction domain CSW12_13880 PF02954 Bacterial regulatory protein, Fis family CSW12_13925 PF00266 Aminotransferase class-V CSW12_13930 PF04199 Putative cyclase CSW12_13935 PF03301 Tryptophan 2,3-dioxygenase CSW12_13965 PF07486 Cell Wall Hydrolase CSW12_13965 PF01471 Putative peptidoglycan binding domain CSW12_13970 PF14620 YpeB sporulation CSW12_13970 PF03413 Peptidase propeptide and YPEB domain CSW12_13975 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) CSW12_13990 PF06081 Aromatic acid exporter family member 1 CSW12_14015 PF00561 alpha/beta hydrolase fold CSW12_14020 PF00107 Zinc-binding dehydrogenase CSW12_14020 PF08240 Alcohol dehydrogenase GroES-like domain CSW12_14025 PF00155 Aminotransferase class I and II CSW12_14025 PF00392 Bacterial regulatory proteins, gntR family CSW12_14030 PF00892 EamA-like transporter family CSW12_14035 PF00344 SecY translocase CSW12_14050 PF00149 Calcineurin-like phosphoesterase CSW12_14050 PF02872 5'-nucleotidase, C-terminal domain CSW12_14055 PF07504 Fungalysin/Thermolysin Propeptide Motif CSW12_14055 PF03413 Peptidase propeptide and YPEB domain CSW12_14055 PF01447 Thermolysin metallopeptidase, catalytic domain CSW12_14055 PF02868 Thermolysin metallopeptidase, alpha-helical domain CSW12_14060 PF03714 Bacterial pullanase-associated domain CSW12_14060 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CSW12_14060 PF00128 Alpha amylase, catalytic domain CSW12_14070 PF00550 Phosphopantetheine attachment site CSW12_14070 PF00668 Condensation domain CSW12_14070 PF13193 AMP-binding enzyme C-terminal domain CSW12_14070 PF00501 AMP-binding enzyme CSW12_14075 PF00282 Pyridoxal-dependent decarboxylase conserved domain CSW12_14080 PF07859 alpha/beta hydrolase fold CSW12_14090 PF02687 FtsX-like permease family CSW12_14090 PF12704 MacB-like periplasmic core domain CSW12_14095 PF00005 ABC transporter CSW12_14110 PF00989 PAS fold CSW12_14110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSW12_14110 PF16736 Single Cache-like CSW12_14110 PF00512 His Kinase A (phospho-acceptor) domain CSW12_14115 PF00486 Transcriptional regulatory protein, C terminal CSW12_14115 PF00072 Response regulator receiver domain CSW12_14150 PF01266 FAD dependent oxidoreductase CSW12_14195 PF01541 GIY-YIG catalytic domain CSW12_14205 PF02673 Bacitracin resistance protein BacA CSW12_14220 PF12867 DinB superfamily CSW12_14230 PF08000 Bacterial PH domain CSW12_14235 PF01734 Patatin-like phospholipase CSW12_14260 PF09234 Domain of unknown function (DUF1963) CSW12_14275 PF12706 Beta-lactamase superfamily domain CSW12_14285 PF02768 DNA polymerase III beta subunit, C-terminal domain CSW12_14285 PF00712 DNA polymerase III beta subunit, N-terminal domain CSW12_14285 PF02767 DNA polymerase III beta subunit, central domain CSW12_14290 PF00293 NUDIX domain CSW12_14290 PF09297 NADH pyrophosphatase zinc ribbon domain CSW12_14300 PF07690 Major Facilitator Superfamily CSW12_14320 PF00293 NUDIX domain CSW12_14320 PF13344 Haloacid dehalogenase-like hydrolase CSW12_14325 PF01784 NIF3 (NGG1p interacting factor 3) CSW12_14335 PF01156 Inosine-uridine preferring nucleoside hydrolase CSW12_14340 PF01270 Glycosyl hydrolases family 8 CSW12_14345 PF00892 EamA-like transporter family CSW12_14350 PF00155 Aminotransferase class I and II CSW12_14350 PF00392 Bacterial regulatory proteins, gntR family CSW12_14370 PF03009 Glycerophosphoryl diester phosphodiesterase family CSW12_14395 PF13411 MerR HTH family regulatory protein CSW12_14395 PF06445 GyrI-like small molecule binding domain CSW12_14400 PF07690 Major Facilitator Superfamily CSW12_14455 PF01569 PAP2 superfamily CSW12_14460 PF00107 Zinc-binding dehydrogenase CSW12_14460 PF08240 Alcohol dehydrogenase GroES-like domain CSW12_14480 PF13344 Haloacid dehalogenase-like hydrolase CSW12_14480 PF00293 NUDIX domain CSW12_14535 PF00589 Phage integrase family CSW12_14535 PF14659 Phage integrase, N-terminal SAM-like domain CSW12_14540 PF00512 His Kinase A (phospho-acceptor) domain CSW12_14540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSW12_14555 PF00005 ABC transporter CSW12_14555 PF12558 ATP-binding cassette cobalt transporter CSW12_14560 PF07155 ECF-type riboflavin transporter, S component CSW12_14565 PF01177 Asp/Glu/Hydantoin racemase CSW12_14570 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase CSW12_14575 PF04986 Putative transposase CSW12_14575 PF14319 Transposase zinc-binding domain CSW12_14580 PF10502 Signal peptidase, peptidase S26 CSW12_14590 PF13188 PAS domain CSW12_14590 PF13426 PAS domain CSW12_14590 PF00989 PAS fold CSW12_14590 PF00512 His Kinase A (phospho-acceptor) domain CSW12_14590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSW12_14605 PF00067 Cytochrome P450 CSW12_14615 PF07561 Domain of Unknown Function (DUF1540) CSW12_14620 PF00132 Bacterial transferase hexapeptide (six repeats) CSW12_14635 PF00067 Cytochrome P450 CSW12_14700 PF03070 TENA/THI-4/PQQC family CSW12_14705 PF07478 D-ala D-ala ligase C-terminus CSW12_14705 PF01820 D-ala D-ala ligase N-terminus CSW12_14710 PF00392 Bacterial regulatory proteins, gntR family CSW12_14710 PF00155 Aminotransferase class I and II CSW12_14715 PF01842 ACT domain CSW12_14715 PF00742 Homoserine dehydrogenase CSW12_14715 PF03447 Homoserine dehydrogenase, NAD binding domain CSW12_14735 PF02687 FtsX-like permease family CSW12_14740 PF00005 ABC transporter CSW12_14770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSW12_14775 PF00486 Transcriptional regulatory protein, C terminal CSW12_14775 PF00072 Response regulator receiver domain CSW12_14785 PF07486 Cell Wall Hydrolase CSW12_14790 PF01921 tRNA synthetases class I (K) CSW12_14800 PF08450 SMP-30/Gluconolactonase/LRE-like region CSW12_14810 PF01965 DJ-1/PfpI family CSW12_14820 PF04239 Protein of unknown function (DUF421) CSW12_14830 PF00107 Zinc-binding dehydrogenase CSW12_14830 PF08240 Alcohol dehydrogenase GroES-like domain CSW12_14845 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal CSW12_14845 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal CSW12_14855 PF00392 Bacterial regulatory proteins, gntR family CSW12_14855 PF00155 Aminotransferase class I and II CSW12_14870 PF12833 Helix-turn-helix domain CSW12_14875 PF01636 Phosphotransferase enzyme family CSW12_14890 PF13847 Methyltransferase domain CSW12_14895 PF01638 HxlR-like helix-turn-helix CSW12_14905 PF00376 MerR family regulatory protein CSW12_14905 PF09278 MerR, DNA binding CSW12_14940 PF12833 Helix-turn-helix domain CSW12_14940 PF17853 GGDEF-like domain CSW12_14945 PF01447 Thermolysin metallopeptidase, catalytic domain CSW12_14945 PF02868 Thermolysin metallopeptidase, alpha-helical domain CSW12_14945 PF03413 Peptidase propeptide and YPEB domain CSW12_14945 PF07504 Fungalysin/Thermolysin Propeptide Motif CSW12_14960 PF01048 Phosphorylase superfamily CSW12_14975 PF00072 Response regulator receiver domain CSW12_14975 PF00486 Transcriptional regulatory protein, C terminal CSW12_14980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSW12_14980 PF00512 His Kinase A (phospho-acceptor) domain CSW12_14985 PF07943 Penicillin-binding protein 5, C-terminal domain CSW12_14985 PF00768 D-alanyl-D-alanine carboxypeptidase CSW12_15010 PF00485 Phosphoribulokinase / Uridine kinase family CSW12_15030 PF00501 AMP-binding enzyme CSW12_15030 PF16177 Acetyl-coenzyme A synthetase N-terminus CSW12_15030 PF13193 AMP-binding enzyme C-terminal domain CSW12_15035 PF01039 Carboxyl transferase domain CSW12_15040 PF00378 Enoyl-CoA hydratase/isomerase CSW12_15045 PF00682 HMGL-like CSW12_15050 PF00364 Biotin-requiring enzyme CSW12_15055 PF02785 Biotin carboxylase C-terminal domain CSW12_15055 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CSW12_15055 PF00289 Biotin carboxylase, N-terminal domain CSW12_15060 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CSW12_15060 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CSW12_15060 PF02770 Acyl-CoA dehydrogenase, middle domain CSW12_15075 PF00440 Bacterial regulatory proteins, tetR family CSW12_15075 PF08359 YsiA-like protein, C-terminal region CSW12_15085 PF00005 ABC transporter CSW12_15095 PF00149 Calcineurin-like phosphoesterase CSW12_15100 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CSW12_15100 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CSW12_15105 PF13302 Acetyltransferase (GNAT) domain CSW12_15130 PF04542 Sigma-70 region 2 CSW12_15130 PF08281 Sigma-70, region 4 CSW12_15135 PF00905 Penicillin binding protein transpeptidase domain CSW12_15135 PF05223 NTF2-like N-terminal transpeptidase domain CSW12_15135 PF03717 Penicillin-binding Protein dimerisation domain CSW12_15145 PF00571 CBS domain CSW12_15145 PF01769 Divalent cation transporter CSW12_15145 PF03448 MgtE intracellular N domain CSW12_15155 PF00355 Rieske [2Fe-2S] domain CSW12_15195 PF03313 Serine dehydratase alpha chain CSW12_15200 PF01842 ACT domain CSW12_15200 PF03315 Serine dehydratase beta chain CSW12_15215 PF00027 Cyclic nucleotide-binding domain CSW12_15215 PF01734 Patatin-like phospholipase CSW12_15260 PF00269 Small, acid-soluble spore proteins, alpha/beta type CSW12_15275 PF05922 Peptidase inhibitor I9 CSW12_15275 PF00082 Subtilase family CSW12_15275 PF02225 PA domain CSW12_15275 PF13860 FlgD Ig-like domain CSW12_15280 PF00072 Response regulator receiver domain CSW12_15280 PF00196 Bacterial regulatory proteins, luxR family CSW12_15285 PF07730 Histidine kinase CSW12_15285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSW12_15285 PF13492 GAF domain CSW12_15290 PF00753 Metallo-beta-lactamase superfamily CSW12_15310 PF01022 Bacterial regulatory protein, arsR family CSW12_15325 PF01047 MarR family CSW12_15335 PF04986 Putative transposase CSW12_15335 PF14319 Transposase zinc-binding domain CSW12_15345 PF00440 Bacterial regulatory proteins, tetR family CSW12_15345 PF17932 Tetracyclin repressor-like, C-terminal domain CSW12_15350 PF01522 Polysaccharide deacetylase CSW12_15370 PF01381 Helix-turn-helix CSW12_15375 PF01520 N-acetylmuramoyl-L-alanine amidase CSW12_15375 PF00395 S-layer homology domain CSW12_15390 PF13302 Acetyltransferase (GNAT) domain CSW12_15410 PF05504 Spore germination B3/ GerAC like, C-terminal CSW12_15415 PF03845 Spore germination protein CSW12_15420 PF03323 Bacillus/Clostridium GerA spore germination protein CSW12_15425 PF00512 His Kinase A (phospho-acceptor) domain CSW12_15425 PF00989 PAS fold CSW12_15425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSW12_15425 PF13188 PAS domain CSW12_15425 PF13426 PAS domain CSW12_15430 PF05791 Bacillus haemolytic enterotoxin (HBL) CSW12_15435 PF05791 Bacillus haemolytic enterotoxin (HBL) CSW12_15450 PF17853 GGDEF-like domain CSW12_15450 PF12833 Helix-turn-helix domain CSW12_15470 PF00269 Small, acid-soluble spore proteins, alpha/beta type CSW12_15475 PF12826 Helix-hairpin-helix motif CSW12_15475 PF08459 UvrC Helix-hairpin-helix N-terminal CSW12_15475 PF01541 GIY-YIG catalytic domain CSW12_15475 PF02151 UvrB/uvrC motif CSW12_15480 PF13520 Amino acid permease CSW12_15485 PF03807 NADP oxidoreductase coenzyme F420-dependent CSW12_15485 PF14748 Pyrroline-5-carboxylate reductase dimerisation CSW12_15495 PF03845 Spore germination protein CSW12_15500 PF03323 Bacillus/Clostridium GerA spore germination protein CSW12_15510 PF08664 YcbB domain CSW12_15510 PF00072 Response regulator receiver domain CSW12_15515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSW12_15520 PF04960 Glutaminase CSW12_15525 PF01235 Sodium:alanine symporter family CSW12_15540 PF00975 Thioesterase domain CSW12_15545 PF01648 4'-phosphopantetheinyl transferase superfamily CSW12_15550 PF00668 Condensation domain CSW12_15550 PF13193 AMP-binding enzyme C-terminal domain CSW12_15550 PF00501 AMP-binding enzyme CSW12_15550 PF00550 Phosphopantetheine attachment site CSW12_15555 PF00550 Phosphopantetheine attachment site CSW12_15555 PF07993 Male sterility protein CSW12_15555 PF00668 Condensation domain CSW12_15555 PF00501 AMP-binding enzyme CSW12_15555 PF13193 AMP-binding enzyme C-terminal domain CSW12_15560 PF00550 Phosphopantetheine attachment site CSW12_15560 PF00501 AMP-binding enzyme CSW12_15560 PF00668 Condensation domain CSW12_15560 PF13193 AMP-binding enzyme C-terminal domain CSW12_15565 PF07690 Major Facilitator Superfamily CSW12_15580 PF07943 Penicillin-binding protein 5, C-terminal domain CSW12_15580 PF00768 D-alanyl-D-alanine carboxypeptidase CSW12_15585 PF00132 Bacterial transferase hexapeptide (six repeats) CSW12_15590 PF01925 Sulfite exporter TauE/SafE CSW12_15600 PF18277 AbrB C-terminal domain CSW12_15600 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin CSW12_15610 PF00072 Response regulator receiver domain CSW12_15610 PF00196 Bacterial regulatory proteins, luxR family CSW12_15615 PF04371 Porphyromonas-type peptidyl-arginine deiminase CSW12_15630 PF01546 Peptidase family M20/M25/M40 CSW12_15630 PF07687 Peptidase dimerisation domain CSW12_15675 PF14171 Toxin SpoIISA, type II toxin-antitoxin system CSW12_15685 PF00300 Histidine phosphatase superfamily (branch 1) CSW12_15690 PF01047 MarR family CSW12_15695 PF00205 Thiamine pyrophosphate enzyme, central domain CSW12_15695 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CSW12_15695 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CSW12_15700 PF08241 Methyltransferase domain CSW12_15710 PF03848 Tellurite resistance protein TehB CSW12_15710 PF09313 Domain of unknown function (DUF1971) CSW12_15715 PF00271 Helicase conserved C-terminal domain CSW12_15715 PF00270 DEAD/DEAH box helicase CSW12_15725 PF00753 Metallo-beta-lactamase superfamily CSW12_15725 PF16123 Hydroxyacylglutathione hydrolase C-terminus CSW12_15740 PF01047 MarR family CSW12_15745 PF00291 Pyridoxal-phosphate dependent enzyme CSW12_15750 PF00266 Aminotransferase class-V CSW12_15755 PF02660 Glycerol-3-phosphate acyltransferase CSW12_15760 PF01869 BadF/BadG/BcrA/BcrD ATPase family CSW12_15765 PF03702 Anhydro-N-acetylmuramic acid kinase CSW12_15775 PF02378 Phosphotransferase system, EIIC CSW12_15785 PF02638 Glycosyl hydrolase-like 10 CSW12_15815 PF04542 Sigma-70 region 2 CSW12_15815 PF08281 Sigma-70, region 4 CSW12_15815 PF12680 SnoaL-like domain CSW12_15820 PF07992 Pyridine nucleotide-disulphide oxidoreductase CSW12_15820 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CSW12_15855 PF07883 Cupin domain CSW12_15855 PF01381 Helix-turn-helix CSW12_15860 PF01810 LysE type translocator CSW12_15895 PF00664 ABC transporter transmembrane region CSW12_15895 PF00005 ABC transporter CSW12_15900 PF00005 ABC transporter CSW12_15900 PF00664 ABC transporter transmembrane region CSW12_15915 PF03473 MOSC domain CSW12_15915 PF03475 3-alpha domain CSW12_15920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSW12_15920 PF03466 LysR substrate binding domain CSW12_15940 PF01118 Semialdehyde dehydrogenase, NAD binding domain CSW12_15940 PF02774 Semialdehyde dehydrogenase, dimerisation domain CSW12_15945 PF03466 LysR substrate binding domain CSW12_15945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSW12_15965 PF00313 'Cold-shock' DNA-binding domain CSW12_15975 PF13302 Acetyltransferase (GNAT) domain CSW12_16010 PF00583 Acetyltransferase (GNAT) family CSW12_16025 PF00302 Chloramphenicol acetyltransferase CSW12_16035 PF03176 MMPL family CSW12_16045 PF16123 Hydroxyacylglutathione hydrolase C-terminus CSW12_16045 PF00753 Metallo-beta-lactamase superfamily CSW12_16085 PF00753 Metallo-beta-lactamase superfamily CSW12_16100 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CSW12_16100 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CSW12_16100 PF00205 Thiamine pyrophosphate enzyme, central domain CSW12_16115 PF07690 Major Facilitator Superfamily CSW12_16125 PF00005 ABC transporter CSW12_16130 PF02824 TGS domain CSW12_16130 PF03129 Anticodon binding domain CSW12_16130 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CSW12_16130 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CSW12_16135 PF00849 RNA pseudouridylate synthase CSW12_16135 PF01479 S4 domain CSW12_16155 PF01235 Sodium:alanine symporter family CSW12_16160 PF00082 Subtilase family CSW12_16165 PF05163 DinB family CSW12_16175 PF00216 Bacterial DNA-binding protein CSW12_16190 PF07690 Major Facilitator Superfamily CSW12_16195 PF03621 MbtH-like protein CSW12_16200 PF00975 Thioesterase domain CSW12_16200 PF00550 Phosphopantetheine attachment site CSW12_16200 PF00501 AMP-binding enzyme CSW12_16200 PF13193 AMP-binding enzyme C-terminal domain CSW12_16200 PF00668 Condensation domain CSW12_16205 PF00550 Phosphopantetheine attachment site CSW12_16205 PF00857 Isochorismatase family CSW12_16210 PF00501 AMP-binding enzyme CSW12_16210 PF13193 AMP-binding enzyme C-terminal domain CSW12_16215 PF00425 chorismate binding enzyme CSW12_16220 PF00106 short chain dehydrogenase CSW12_16230 PF07690 Major Facilitator Superfamily CSW12_16245 PF01022 Bacterial regulatory protein, arsR family CSW12_16265 PF13476 AAA domain CSW12_16270 PF12320 Type 5 capsule protein repressor C-terminal domain CSW12_16270 PF00149 Calcineurin-like phosphoesterase CSW12_16285 PF00378 Enoyl-CoA hydratase/isomerase CSW12_16290 PF01810 LysE type translocator CSW12_16295 PF00171 Aldehyde dehydrogenase family CSW12_16300 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CSW12_16300 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CSW12_16305 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CSW12_16305 PF02770 Acyl-CoA dehydrogenase, middle domain CSW12_16305 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CSW12_16315 PF03972 MmgE/PrpD family CSW12_16320 PF00285 Citrate synthase, C-terminal domain CSW12_16325 PF01521 Iron-sulphur cluster biosynthesis CSW12_16330 PF07690 Major Facilitator Superfamily CSW12_16340 PF00912 Transglycosylase CSW12_16340 PF00905 Penicillin binding protein transpeptidase domain CSW12_16360 PF00106 short chain dehydrogenase CSW12_16375 PF10676 Spore germination protein gerPA/gerPF CSW12_16445 PF13302 Acetyltransferase (GNAT) domain CSW12_16450 PF00085 Thioredoxin CSW12_16455 PF16916 Dimerisation domain of Zinc Transporter CSW12_16455 PF01545 Cation efflux family CSW12_16460 PF01569 PAP2 superfamily CSW12_16470 PF00069 Protein kinase domain CSW12_16470 PF08239 Bacterial SH3 domain CSW12_16480 PF14162 YozD-like protein CSW12_16495 PF06855 YozE SAM-like fold CSW12_16500 PF14122 YokU-like protein, putative antitoxin CSW12_16505 PF12544 Lysine-2,3-aminomutase CSW12_16515 PF02954 Bacterial regulatory protein, Fis family CSW12_16515 PF13426 PAS domain CSW12_16515 PF00158 Sigma-54 interaction domain CSW12_16520 PF00583 Acetyltransferase (GNAT) family CSW12_16525 PF01546 Peptidase family M20/M25/M40 CSW12_16525 PF07687 Peptidase dimerisation domain CSW12_16530 PF01144 Coenzyme A transferase CSW12_16535 PF01144 Coenzyme A transferase CSW12_16540 PF00202 Aminotransferase class-III CSW12_16550 PF09385 Histidine kinase N terminal CSW12_16555 PF07997 Protein of unknown function (DUF1694) CSW12_16560 PF00171 Aldehyde dehydrogenase family CSW12_16565 PF00571 CBS domain CSW12_16565 PF03471 Transporter associated domain CSW12_16565 PF01595 Cyclin M transmembrane N-terminal domain CSW12_16595 PF13520 Amino acid permease CSW12_16600 PF00528 Binding-protein-dependent transport system inner membrane component CSW12_16605 PF00005 ABC transporter CSW12_16605 PF00571 CBS domain CSW12_16620 PF03358 NADPH-dependent FMN reductase CSW12_16635 PF10924 Protein of unknown function (DUF2711) CSW12_16640 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CSW12_16640 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain CSW12_16645 PF02447 GntP family permease CSW12_16650 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CSW12_16650 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CSW12_16665 PF00107 Zinc-binding dehydrogenase CSW12_16665 PF08240 Alcohol dehydrogenase GroES-like domain CSW12_16670 PF02567 Phenazine biosynthesis-like protein CSW12_16675 PF01418 Helix-turn-helix domain, rpiR family CSW12_16675 PF01380 SIS domain CSW12_16680 PF00072 Response regulator receiver domain CSW12_16680 PF00196 Bacterial regulatory proteins, luxR family CSW12_16685 PF13185 GAF domain CSW12_16685 PF07730 Histidine kinase CSW12_16690 PF00924 Mechanosensitive ion channel CSW12_16760 PF01381 Helix-turn-helix CSW12_16790 PF00881 Nitroreductase family CSW12_16795 PF01063 Amino-transferase class IV CSW12_16800 PF01497 Periplasmic binding protein CSW12_16805 PF01520 N-acetylmuramoyl-L-alanine amidase CSW12_16805 PF05036 Sporulation related domain CSW12_16820 PF13537 Glutamine amidotransferase domain CSW12_16820 PF00733 Asparagine synthase CSW12_16825 PF00011 Hsp20/alpha crystallin family CSW12_16830 PF02630 SCO1/SenC CSW12_16840 PF02645 Uncharacterised protein, DegV family COG1307 CSW12_16855 PF00902 Sec-independent protein translocase protein (TatC) CSW12_16860 PF02416 mttA/Hcf106 family CSW12_16865 PF03006 Haemolysin-III related CSW12_16870 PF01553 Acyltransferase CSW12_16875 PF02525 Flavodoxin-like fold CSW12_16880 PF00905 Penicillin binding protein transpeptidase domain CSW12_16880 PF03717 Penicillin-binding Protein dimerisation domain CSW12_16880 PF05223 NTF2-like N-terminal transpeptidase domain CSW12_16885 PF00186 Dihydrofolate reductase CSW12_16890 PF00303 Thymidylate synthase CSW12_16895 PF07930 D-aminopeptidase, domain B CSW12_16895 PF00144 Beta-lactamase CSW12_16910 PF13419 Haloacid dehalogenase-like hydrolase CSW12_16915 PF14005 YpjP-like protein CSW12_16920 PF05975 Bacterial ABC transporter protein EcsB CSW12_16925 PF00005 ABC transporter CSW12_16935 PF08645 Polynucleotide kinase 3 phosphatase CSW12_16940 PF13443 Cro/C1-type HTH DNA-binding domain CSW12_16945 PF11188 Protein of unknown function (DUF2975) CSW12_16950 PF00583 Acetyltransferase (GNAT) family CSW12_16955 PF01980 tRNA-methyltransferase O CSW12_16960 PF01177 Asp/Glu/Hydantoin racemase CSW12_16965 PF00465 Iron-containing alcohol dehydrogenase CSW12_16975 PF13419 Haloacid dehalogenase-like hydrolase CSW12_16980 PF10997 Alternate to MurJ CSW12_16995 PF00209 Sodium:neurotransmitter symporter family CSW12_17050 PF12538 DNA transporter CSW12_17050 PF01580 FtsK/SpoIIIE family CSW12_17070 PF00152 tRNA synthetases class II (D, K and N) CSW12_17070 PF01336 OB-fold nucleic acid binding domain CSW12_17080 PF02875 Mur ligase family, glutamate ligase domain CSW12_17080 PF08245 Mur ligase middle domain CSW12_17080 PF01225 Mur ligase family, catalytic domain CSW12_17105 PF00133 tRNA synthetases class I (I, L, M and V) CSW12_17105 PF08264 Anticodon-binding domain of tRNA CSW12_17120 PF00750 tRNA synthetases class I (R) CSW12_17120 PF05746 DALR anticodon binding domain CSW12_17120 PF03485 Arginyl tRNA synthetase N terminal domain CSW12_17125 PF04445 Putative SAM-dependent methyltransferase CSW12_17130 PF06491 Disulphide isomerase CSW12_17145 PF08712 Scaffold protein Nfu/NifU N terminal CSW12_17145 PF13769 Virulence factor CSW12_17160 PF00436 Single-strand binding protein family CSW12_17175 PF16326 ABC transporter C-terminal domain CSW12_17175 PF12848 ABC transporter CSW12_17175 PF00005 ABC transporter CSW12_17180 PF01966 HD domain CSW12_17195 PF04232 Stage V sporulation protein S (SpoVS) CSW12_17230 PF04405 Domain of Unknown function (DUF542) CSW12_17230 PF01814 Hemerythrin HHE cation binding domain CSW12_17235 PF04324 BFD-like [2Fe-2S] binding domain CSW12_17235 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CSW12_17235 PF18267 Rubredoxin NAD+ reductase C-terminal domain CSW12_17235 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CSW12_17235 PF07992 Pyridine nucleotide-disulphide oxidoreductase CSW12_17240 PF00355 Rieske [2Fe-2S] domain CSW12_17245 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CSW12_17250 PF01903 CbiX CSW12_17275 PF07690 Major Facilitator Superfamily CSW12_17285 PF02391 MoaE protein CSW12_17290 PF00994 Probable molybdopterin binding domain CSW12_17290 PF03454 MoeA C-terminal region (domain IV) CSW12_17290 PF03453 MoeA N-terminal region (domain I and II) CSW12_17295 PF00899 ThiF family CSW12_17300 PF04055 Radical SAM superfamily CSW12_17300 PF06463 Molybdenum Cofactor Synthesis C CSW12_17305 PF00325 Bacterial regulatory proteins, crp family CSW12_17305 PF00027 Cyclic nucleotide-binding domain CSW12_17310 PF02665 Nitrate reductase gamma subunit CSW12_17315 PF02613 Nitrate reductase delta subunit CSW12_17320 PF14711 Respiratory nitrate reductase beta C-terminal CSW12_17320 PF13247 4Fe-4S dicluster domain CSW12_17325 PF00384 Molybdopterin oxidoreductase CSW12_17325 PF01568 Molydopterin dinucleotide binding domain CSW12_17325 PF14710 Respiratory nitrate reductase alpha N-terminal CSW12_17330 PF17863 AAA lid domain CSW12_17330 PF07726 ATPase family associated with various cellular activities (AAA) CSW12_17335 PF01882 Protein of unknown function DUF58 CSW12_17340 PF11992 Domain of unknown function (DUF3488) CSW12_17340 PF13559 Domain of unknown function (DUF4129) CSW12_17340 PF01841 Transglutaminase-like superfamily CSW12_17345 PF00255 Glutathione peroxidase CSW12_17355 PF00258 Flavodoxin CSW12_17355 PF01613 Flavin reductase like domain CSW12_17370 PF08281 Sigma-70, region 4 CSW12_17370 PF04542 Sigma-70 region 2 CSW12_17375 PF00107 Zinc-binding dehydrogenase CSW12_17375 PF08240 Alcohol dehydrogenase GroES-like domain CSW12_17385 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CSW12_17395 PF00270 DEAD/DEAH box helicase CSW12_17395 PF00271 Helicase conserved C-terminal domain CSW12_17405 PF01268 Formate--tetrahydrofolate ligase CSW12_17410 PF01209 ubiE/COQ5 methyltransferase family CSW12_17435 PF09579 Sporulation protein YtfJ (Spore_YtfJ) CSW12_17475 PF00583 Acetyltransferase (GNAT) family CSW12_17505 PF00392 Bacterial regulatory proteins, gntR family CSW12_17505 PF00155 Aminotransferase class I and II CSW12_17510 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CSW12_17510 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CSW12_17515 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase CSW12_17535 PF01168 Alanine racemase, N-terminal domain CSW12_17535 PF00842 Alanine racemase, C-terminal domain CSW12_17545 PF07690 Major Facilitator Superfamily CSW12_17550 PF01047 MarR family CSW12_17565 PF07454 Stage II sporulation protein P (SpoIIP) CSW12_17570 PF01145 SPFH domain / Band 7 family CSW12_17580 PF07690 Major Facilitator Superfamily CSW12_17585 PF01425 Amidase CSW12_17595 PF02557 D-alanyl-D-alanine carboxypeptidase CSW12_17610 PF07454 Stage II sporulation protein P (SpoIIP) CSW12_17630 PF01588 Putative tRNA binding domain CSW12_17635 PF05525 Branched-chain amino acid transport protein CSW12_17660 PF01595 Cyclin M transmembrane N-terminal domain CSW12_17660 PF03471 Transporter associated domain CSW12_17660 PF00571 CBS domain CSW12_17665 PF04306 Protein of unknown function (DUF456) CSW12_17670 PF13460 NAD(P)H-binding CSW12_17685 PF13091 PLD-like domain CSW12_17685 PF13396 Phospholipase_D-nuclease N-terminal CSW12_17695 PF03061 Thioesterase superfamily CSW12_17700 PF09323 Domain of unknown function (DUF1980) CSW12_17705 PF03773 Predicted permease CSW12_17715 PF14667 Polysaccharide biosynthesis C-terminal domain CSW12_17715 PF01943 Polysaccharide biosynthesis protein CSW12_17720 PF09335 SNARE associated Golgi protein CSW12_17725 PF00293 NUDIX domain CSW12_17730 PF08757 CotH kinase protein CSW12_17740 PF00300 Histidine phosphatase superfamily (branch 1) CSW12_17750 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CSW12_17755 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CSW12_17765 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CSW12_17765 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CSW12_17770 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CSW12_17775 PF13460 NAD(P)H-binding CSW12_17785 PF01297 Zinc-uptake complex component A periplasmic CSW12_17790 PF00583 Acetyltransferase (GNAT) family CSW12_17795 PF02492 CobW/HypB/UreG, nucleotide-binding domain CSW12_17795 PF07683 Cobalamin synthesis protein cobW C-terminal domain CSW12_17800 PF00248 Aldo/keto reductase family CSW12_17805 PF13302 Acetyltransferase (GNAT) domain CSW12_17810 PF01593 Flavin containing amine oxidoreductase CSW12_17835 PF00210 Ferritin-like domain CSW12_17860 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CSW12_17860 PF00672 HAMP domain CSW12_17860 PF02743 Cache domain CSW12_17865 PF03193 RsgA GTPase CSW12_17885 PF07690 Major Facilitator Superfamily CSW12_17890 PF00248 Aldo/keto reductase family CSW12_17895 PF01022 Bacterial regulatory protein, arsR family CSW12_17900 PF00082 Subtilase family CSW12_17905 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin CSW12_17905 PF18277 AbrB C-terminal domain CSW12_17910 PF02687 FtsX-like permease family CSW12_17915 PF02540 NAD synthase CSW12_17920 PF00293 NUDIX domain CSW12_17920 PF13344 Haloacid dehalogenase-like hydrolase CSW12_17945 PF01734 Patatin-like phospholipase CSW12_17955 PF00392 Bacterial regulatory proteins, gntR family CSW12_17955 PF00155 Aminotransferase class I and II CSW12_17960 PF01810 LysE type translocator CSW12_17965 PF07690 Major Facilitator Superfamily CSW12_17970 PF00269 Small, acid-soluble spore proteins, alpha/beta type CSW12_17975 PF01261 Xylose isomerase-like TIM barrel CSW12_17990 PF00501 AMP-binding enzyme CSW12_17990 PF13193 AMP-binding enzyme C-terminal domain CSW12_17995 PF06276 Ferric iron reductase FhuF-like transporter CSW12_17995 PF04183 IucA / IucC family CSW12_18000 PF06276 Ferric iron reductase FhuF-like transporter CSW12_18000 PF04183 IucA / IucC family CSW12_18005 PF00583 Acetyltransferase (GNAT) family CSW12_18010 PF02308 MgtC family CSW12_18025 PF00989 PAS fold CSW12_18025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSW12_18025 PF00512 His Kinase A (phospho-acceptor) domain CSW12_18025 PF16736 Single Cache-like CSW12_18030 PF00486 Transcriptional regulatory protein, C terminal CSW12_18030 PF00072 Response regulator receiver domain CSW12_18040 PF03816 Cell envelope-related transcriptional attenuator domain CSW12_18055 PF08544 GHMP kinases C terminal CSW12_18055 PF00288 GHMP kinases N terminal domain CSW12_18060 PF00291 Pyridoxal-phosphate dependent enzyme CSW12_18065 PF00742 Homoserine dehydrogenase CSW12_18065 PF03447 Homoserine dehydrogenase, NAD binding domain CSW12_18065 PF01842 ACT domain CSW12_18085 PF01522 Polysaccharide deacetylase CSW12_18085 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain CSW12_18090 PF04439 Streptomycin adenylyltransferase CSW12_18100 PF00106 short chain dehydrogenase CSW12_18105 PF16736 Single Cache-like CSW12_18105 PF00989 PAS fold CSW12_18105 PF00512 His Kinase A (phospho-acceptor) domain CSW12_18105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSW12_18110 PF00486 Transcriptional regulatory protein, C terminal CSW12_18110 PF00072 Response regulator receiver domain CSW12_18125 PF00877 NlpC/P60 family CSW12_18125 PF01476 LysM domain CSW12_18140 PF00768 D-alanyl-D-alanine carboxypeptidase CSW12_18140 PF07943 Penicillin-binding protein 5, C-terminal domain CSW12_18145 PF17676 LD-carboxypeptidase C-terminal domain CSW12_18145 PF02016 LD-carboxypeptidase N-terminal domain CSW12_18165 PF00132 Bacterial transferase hexapeptide (six repeats) CSW12_18170 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CSW12_18175 PF00535 Glycosyl transferase family 2 CSW12_18185 PF00664 ABC transporter transmembrane region CSW12_18185 PF00005 ABC transporter CSW12_18190 PF00664 ABC transporter transmembrane region CSW12_18190 PF00005 ABC transporter CSW12_18195 PF02322 Cytochrome bd terminal oxidase subunit II CSW12_18200 PF01654 Cytochrome bd terminal oxidase subunit I CSW12_18210 PF01047 MarR family CSW12_18220 PF14552 Tautomerase enzyme CSW12_18230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSW12_18230 PF03466 LysR substrate binding domain CSW12_18240 PF02653 Branched-chain amino acid transport system / permease component CSW12_18245 PF00005 ABC transporter CSW12_18250 PF00005 ABC transporter CSW12_18250 PF12399 Branched-chain amino acid ATP-binding cassette transporter CSW12_18260 PF02492 CobW/HypB/UreG, nucleotide-binding domain CSW12_18260 PF07683 Cobalamin synthesis protein cobW C-terminal domain CSW12_18270 PF01593 Flavin containing amine oxidoreductase CSW12_18275 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CSW12_18275 PF00056 lactate/malate dehydrogenase, NAD binding domain CSW12_18280 PF01594 AI-2E family transporter CSW12_18285 PF01425 Amidase CSW12_18295 PF00881 Nitroreductase family CSW12_18300 PF01323 DSBA-like thioredoxin domain CSW12_18305 PF02082 Transcriptional regulator CSW12_18310 PF03466 LysR substrate binding domain CSW12_18310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSW12_18315 PF00892 EamA-like transporter family CSW12_18320 PF07987 Domain of unkown function (DUF1775) CSW12_18325 PF04234 CopC domain CSW12_18325 PF05425 Copper resistance protein D CSW12_18325 PF13115 YtkA-like CSW12_18335 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CSW12_18340 PF05525 Branched-chain amino acid transport protein CSW12_18345 PF02525 Flavodoxin-like fold CSW12_18375 PF07731 Multicopper oxidase CSW12_18375 PF07732 Multicopper oxidase CSW12_18375 PF00394 Multicopper oxidase CSW12_18385 PF00557 Metallopeptidase family M24 CSW12_18385 PF05195 Aminopeptidase P, N-terminal domain CSW12_18390 PF05979 Bacterial protein of unknown function (DUF896) CSW12_18395 PF07301 Protein of unknown function (DUF1453) CSW12_18400 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CSW12_18405 PF00591 Glycosyl transferase family, a/b domain CSW12_18405 PF02885 Glycosyl transferase family, helical bundle domain CSW12_18405 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain CSW12_18410 PF01773 Na+ dependent nucleoside transporter N-terminus CSW12_18410 PF07662 Na+ dependent nucleoside transporter C-terminus CSW12_18415 PF01791 DeoC/LacD family aldolase CSW12_18420 PF04198 Putative sugar-binding domain CSW12_18425 PF00440 Bacterial regulatory proteins, tetR family CSW12_18435 PF01906 Putative heavy-metal-binding CSW12_18445 PF00583 Acetyltransferase (GNAT) family CSW12_18460 PF02073 Thermophilic metalloprotease (M29) CSW12_18465 PF10633 NPCBM-associated, NEW3 domain of alpha-galactosidase CSW12_18465 PF00754 F5/8 type C domain CSW12_18465 PF13088 BNR repeat-like domain CSW12_18475 PF05791 Bacillus haemolytic enterotoxin (HBL) CSW12_18480 PF05791 Bacillus haemolytic enterotoxin (HBL) CSW12_18495 PF13520 Amino acid permease CSW12_18500 PF08546 Ketopantoate reductase PanE/ApbA C terminal CSW12_18500 PF02558 Ketopantoate reductase PanE/ApbA CSW12_18515 PF01566 Natural resistance-associated macrophage protein CSW12_18520 PF13302 Acetyltransferase (GNAT) domain CSW12_18565 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CSW12_18570 PF00440 Bacterial regulatory proteins, tetR family CSW12_18575 PF07690 Major Facilitator Superfamily CSW12_18580 PF01979 Amidohydrolase family CSW12_18595 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain CSW12_18595 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain CSW12_18600 PF00072 Response regulator receiver domain CSW12_18600 PF04397 LytTr DNA-binding domain CSW12_18610 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CSW12_18615 PF07690 Major Facilitator Superfamily CSW12_18625 PF09587 Bacterial capsule synthesis protein PGA_cap CSW12_18635 PF00585 C-terminal regulatory domain of Threonine dehydratase CSW12_18635 PF00291 Pyridoxal-phosphate dependent enzyme CSW12_18640 PF00920 Dehydratase family CSW12_18645 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain CSW12_18645 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CSW12_18655 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CSW12_18655 PF00205 Thiamine pyrophosphate enzyme, central domain CSW12_18655 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CSW12_18660 PF01063 Amino-transferase class IV CSW12_18670 PF01625 Peptide methionine sulfoxide reductase CSW12_18700 PF04239 Protein of unknown function (DUF421) CSW12_18715 PF00457 Glycosyl hydrolases family 11 CSW12_18715 PF01522 Polysaccharide deacetylase CSW12_18715 PF03422 Carbohydrate binding module (family 6) CSW12_18720 PF00209 Sodium:neurotransmitter symporter family CSW12_18740 PF00291 Pyridoxal-phosphate dependent enzyme CSW12_18745 PF07690 Major Facilitator Superfamily CSW12_18750 PF01926 50S ribosome-binding GTPase CSW12_18750 PF13167 GTP-binding GTPase N-terminal CSW12_18750 PF16360 GTP-binding GTPase Middle Region CSW12_18755 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CSW12_18755 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CSW12_18760 PF07690 Major Facilitator Superfamily CSW12_18765 PF07690 Major Facilitator Superfamily CSW12_18770 PF10400 Virulence activator alpha C-term CSW12_18770 PF03551 Transcriptional regulator PadR-like family CSW12_18775 PF03976 Polyphosphate kinase 2 (PPK2) CSW12_18790 PF14158 YndJ-like protein CSW12_18810 PF00696 Amino acid kinase family CSW12_18810 PF13840 ACT domain CSW12_18825 PF03590 Aspartate-ammonia ligase CSW12_18840 PF00176 SNF2 family N-terminal domain CSW12_18840 PF04434 SWIM zinc finger CSW12_18840 PF00271 Helicase conserved C-terminal domain CSW12_18845 PF08664 YcbB domain CSW12_18845 PF00072 Response regulator receiver domain CSW12_18850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSW12_18855 PF03949 Malic enzyme, NAD binding domain CSW12_18855 PF00390 Malic enzyme, N-terminal domain CSW12_18860 PF00206 Lyase CSW12_18860 PF10415 Fumarase C C-terminus CSW12_18865 PF00375 Sodium:dicarboxylate symporter family CSW12_18870 PF00696 Amino acid kinase family CSW12_18875 PF13091 PLD-like domain CSW12_18890 PF00005 ABC transporter CSW12_18895 PF13185 GAF domain CSW12_18895 PF13492 GAF domain CSW12_18895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSW12_18895 PF07730 Histidine kinase CSW12_18900 PF00072 Response regulator receiver domain CSW12_18900 PF00196 Bacterial regulatory proteins, luxR family CSW12_18930 PF04286 Protein of unknown function (DUF445) CSW12_18935 PF00291 Pyridoxal-phosphate dependent enzyme CSW12_18950 PF18801 response regulator aspartate phosphatase H, N terminal CSW12_18960 PF00578 AhpC/TSA family CSW12_18965 PF02683 Cytochrome C biogenesis protein transmembrane region CSW12_18985 PF03575 Peptidase family S51 CSW12_18990 PF01554 MatE CSW12_19005 PF10415 Fumarase C C-terminus CSW12_19005 PF00206 Lyase CSW12_19015 PF13411 MerR HTH family regulatory protein CSW12_19020 PF03553 Na+/H+ antiporter family CSW12_19035 PF03773 Predicted permease CSW12_19045 PF02492 CobW/HypB/UreG, nucleotide-binding domain CSW12_19045 PF07683 Cobalamin synthesis protein cobW C-terminal domain CSW12_19055 PF00892 EamA-like transporter family CSW12_19060 PF07729 FCD domain CSW12_19060 PF00392 Bacterial regulatory proteins, gntR family CSW12_19070 PF01545 Cation efflux family CSW12_19070 PF16916 Dimerisation domain of Zinc Transporter CSW12_19090 PF13537 Glutamine amidotransferase domain CSW12_19090 PF00733 Asparagine synthase CSW12_19100 PF01047 MarR family CSW12_19110 PF00561 alpha/beta hydrolase fold CSW12_19125 PF13021 Domain of unknown function (DUF3885) CSW12_19145 PF10787 Uncharacterised protein from bacillus cereus group CSW12_19150 PF00144 Beta-lactamase CSW12_19165 PF00528 Binding-protein-dependent transport system inner membrane component CSW12_19175 PF08402 TOBE domain CSW12_19175 PF00005 ABC transporter CSW12_19200 PF08141 Small acid-soluble spore protein H family CSW12_19205 PF03992 Antibiotic biosynthesis monooxygenase CSW12_19240 PF01411 tRNA synthetases class II (A) CSW12_19240 PF02272 DHHA1 domain CSW12_19240 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CSW12_19250 PF00460 Flagella basal body rod protein CSW12_19250 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CSW12_19255 PF00448 SRP54-type protein, GTPase domain CSW12_19260 PF00771 FHIPEP family CSW12_19265 PF01312 FlhB HrpN YscU SpaS Family CSW12_19275 PF01313 Bacterial export proteins, family 3 CSW12_19280 PF00813 FliP family CSW12_19290 PF04509 CheC-like family CSW12_19290 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CSW12_19295 PF02154 Flagellar motor switch protein FliM CSW12_19295 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CSW12_19305 PF01464 Transglycosylase SLT domain CSW12_19310 PF00700 Bacterial flagellin C-terminal helical region CSW12_19310 PF00669 Bacterial flagellin N-terminal helical region CSW12_19315 PF00669 Bacterial flagellin N-terminal helical region CSW12_19315 PF00700 Bacterial flagellin C-terminal helical region CSW12_19320 PF00669 Bacterial flagellin N-terminal helical region CSW12_19320 PF00700 Bacterial flagellin C-terminal helical region CSW12_19325 PF00700 Bacterial flagellin C-terminal helical region CSW12_19325 PF00669 Bacterial flagellin N-terminal helical region CSW12_19330 PF12181 DNA binding domain of the motility gene repressor (MogR) CSW12_19335 PF00072 Response regulator receiver domain CSW12_19335 PF01584 CheW-like domain CSW12_19350 PF07559 Flagellar basal body protein FlaE CSW12_19350 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CSW12_19350 PF00460 Flagella basal body rod protein CSW12_19370 PF02874 ATP synthase alpha/beta family, beta-barrel domain CSW12_19370 PF18269 T3SS EscN ATPase C-terminal domain CSW12_19370 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CSW12_19380 PF14842 FliG N-terminal domain CSW12_19380 PF14841 FliG middle domain CSW12_19380 PF01706 FliG C-terminal domain CSW12_19385 PF08345 Flagellar M-ring protein C-terminal CSW12_19385 PF01514 Secretory protein of YscJ/FliF family CSW12_19390 PF02049 Flagellar hook-basal body complex protein FliE CSW12_19395 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CSW12_19395 PF00460 Flagella basal body rod protein CSW12_19400 PF00460 Flagella basal body rod protein CSW12_19415 PF07195 Flagellar hook-associated protein 2 C-terminus CSW12_19415 PF02465 Flagellar hook-associated protein 2 N-terminus CSW12_19420 PF00669 Bacterial flagellin N-terminal helical region CSW12_19420 PF00700 Bacterial flagellin C-terminal helical region CSW12_19445 PF03705 CheR methyltransferase, all-alpha domain CSW12_19445 PF01739 CheR methyltransferase, SAM binding domain CSW12_19460 PF04509 CheC-like family CSW12_19460 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CSW12_19465 PF01627 Hpt domain CSW12_19465 PF07194 P2 response regulator binding domain CSW12_19465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSW12_19465 PF02895 Signal transducing histidine kinase, homodimeric domain CSW12_19465 PF01584 CheW-like domain CSW12_19470 PF00072 Response regulator receiver domain CSW12_19475 PF00691 OmpA family CSW12_19475 PF13677 Membrane MotB of proton-channel complex MotA/MotB CSW12_19480 PF01618 MotA/TolQ/ExbB proton channel family CSW12_19490 PF17209 Hfq protein CSW12_19530 PF00881 Nitroreductase family CSW12_19540 PF02698 DUF218 domain CSW12_19545 PF04239 Protein of unknown function (DUF421) CSW12_19555 PF13411 MerR HTH family regulatory protein CSW12_19555 PF06445 GyrI-like small molecule binding domain CSW12_19560 PF00999 Sodium/hydrogen exchanger family CSW12_19570 PF00202 Aminotransferase class-III CSW12_19575 PF00474 Sodium:solute symporter family CSW12_19595 PF01810 LysE type translocator CSW12_19600 PF08892 YqcI/YcgG family CSW12_19605 PF00313 'Cold-shock' DNA-binding domain CSW12_19630 PF01263 Aldose 1-epimerase CSW12_19635 PF13456 Reverse transcriptase-like CSW12_19655 PF18014 Acetyltransferase (GNAT) domain CSW12_19655 PF13673 Acetyltransferase (GNAT) domain CSW12_19670 PF00534 Glycosyl transferases group 1 CSW12_19670 PF13439 Glycosyltransferase Family 4 CSW12_19675 PF00535 Glycosyl transferase family 2 CSW12_19690 PF02397 Bacterial sugar transferase CSW12_19700 PF02706 Chain length determinant protein CSW12_19715 PF01367 5'-3' exonuclease, C-terminal SAM fold CSW12_19715 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CSW12_19720 PF00690 Cation transporter/ATPase, N-terminus CSW12_19720 PF00689 Cation transporting ATPase, C-terminus CSW12_19755 PF00581 Rhodanese-like domain CSW12_19760 PF10752 Protein of unknown function (DUF2533) CSW12_19765 PF00583 Acetyltransferase (GNAT) family CSW12_19775 PF00350 Dynamin family CSW12_19785 PF04235 Protein of unknown function (DUF418) CSW12_19790 PF00860 Permease family CSW12_19795 PF00156 Phosphoribosyl transferase domain CSW12_19800 PF00557 Metallopeptidase family M24 CSW12_19810 PF02074 Carboxypeptidase Taq (M32) metallopeptidase CSW12_19815 PF13307 Helicase C-terminal domain CSW12_19825 PF01170 Putative RNA methylase family UPF0020 CSW12_19825 PF02926 THUMP domain CSW12_19835 PF05103 DivIVA protein CSW12_19840 PF06908 YspA SLOG family CSW12_19875 PF10720 Protein of unknown function (DUF2515) CSW12_19880 PF03838 Recombination protein U CSW12_19885 PF00905 Penicillin binding protein transpeptidase domain CSW12_19885 PF00912 Transglycosylase CSW12_19895 PF10576 Iron-sulfur binding domain of endonuclease III CSW12_19895 PF00730 HhH-GPD superfamily base excision DNA repair protein CSW12_19895 PF00633 Helix-hairpin-helix motif CSW12_19900 PF07261 Replication initiation and membrane attachment CSW12_19905 PF00155 Aminotransferase class I and II CSW12_19915 PF14084 Protein of unknown function (DUF4264) CSW12_19920 PF13307 Helicase C-terminal domain CSW12_19920 PF04851 Type III restriction enzyme, res subunit CSW12_19920 PF00929 Exonuclease CSW12_19925 PF02261 Aspartate decarboxylase CSW12_19930 PF02569 Pantoate-beta-alanine ligase CSW12_19935 PF02548 Ketopantoate hydroxymethyltransferase CSW12_19950 PF02237 Biotin protein ligase C terminal domain CSW12_19950 PF03099 Biotin/lipoate A/B protein ligase family CSW12_19950 PF08279 HTH domain CSW12_19955 PF12627 Probable RNA and SrmB- binding site of polymerase A CSW12_19955 PF01743 Poly A polymerase head domain CSW12_19955 PF13735 tRNA nucleotidyltransferase domain 2 putative CSW12_19960 PF13439 Glycosyltransferase Family 4 CSW12_19960 PF00534 Glycosyl transferases group 1 CSW12_19965 PF02585 GlcNAc-PI de-N-acetylase CSW12_19970 PF02142 MGS-like domain CSW12_19975 PF01113 Dihydrodipicolinate reductase, N-terminus CSW12_19975 PF05173 Dihydrodipicolinate reductase, C-terminus CSW12_19980 PF03819 MazG nucleotide pyrophosphohydrolase domain CSW12_19990 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CSW12_19990 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CSW12_20000 PF04298 Putative neutral zinc metallopeptidase CSW12_20005 PF09577 Sporulation protein YpjB (SpoYpjB) CSW12_20015 PF07187 Protein of unknown function (DUF1405) CSW12_20025 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CSW12_20025 PF00032 Cytochrome b(C-terminal)/b6/petD CSW12_20030 PF00033 Cytochrome b/b6/petB CSW12_20035 PF00355 Rieske [2Fe-2S] domain CSW12_20040 PF10673 Protein of unknown function (DUF2487) CSW12_20045 PF08858 IDEAL domain CSW12_20045 PF08864 UPF0302 domain CSW12_20055 PF00155 Aminotransferase class I and II CSW12_20060 PF01761 3-dehydroquinate synthase CSW12_20065 PF01264 Chorismate synthase CSW12_20070 PF00334 Nucleoside diphosphate kinase CSW12_20075 PF00348 Polyprenyl synthetase CSW12_20080 PF01209 ubiE/COQ5 methyltransferase family CSW12_20085 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 CSW12_20090 PF01227 GTP cyclohydrolase I CSW12_20095 PF00216 Bacterial DNA-binding protein CSW12_20100 PF09547 Stage IV sporulation protein A (spore_IV_A) CSW12_20110 PF10966 Protein of unknown function (DUF2768) CSW12_20120 PF00583 Acetyltransferase (GNAT) family CSW12_20125 PF12146 Serine aminopeptidase, S33 CSW12_20130 PF10827 Protein of unknown function (DUF2552) CSW12_20140 PF01872 RibD C-terminal domain CSW12_20140 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CSW12_20145 PF00677 Lumazine binding domain CSW12_20150 PF00925 GTP cyclohydrolase II CSW12_20150 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CSW12_20155 PF00885 6,7-dimethyl-8-ribityllumazine synthase CSW12_20165 PF06968 Biotin and Thiamin Synthesis associated domain CSW12_20165 PF04055 Radical SAM superfamily CSW12_20170 PF13847 Methyltransferase domain CSW12_20175 PF12697 Alpha/beta hydrolase family CSW12_20175 PF08241 Methyltransferase domain CSW12_20180 PF00155 Aminotransferase class I and II CSW12_20190 PF00202 Aminotransferase class-III CSW12_20210 PF02872 5'-nucleotidase, C-terminal domain CSW12_20210 PF00149 Calcineurin-like phosphoesterase CSW12_20220 PF13404 AsnC-type helix-turn-helix domain CSW12_20220 PF01037 Lrp/AsnC ligand binding domain CSW12_20235 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CSW12_20235 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CSW12_20240 PF00202 Aminotransferase class-III CSW12_20245 PF00696 Amino acid kinase family CSW12_20250 PF01960 ArgJ family CSW12_20255 PF01118 Semialdehyde dehydrogenase, NAD binding domain CSW12_20255 PF02774 Semialdehyde dehydrogenase, dimerisation domain CSW12_20265 PF00106 short chain dehydrogenase CSW12_20270 PF00753 Metallo-beta-lactamase superfamily CSW12_20275 PF14748 Pyrroline-5-carboxylate reductase dimerisation CSW12_20275 PF03807 NADP oxidoreductase coenzyme F420-dependent CSW12_20280 PF03313 Serine dehydratase alpha chain CSW12_20285 PF01842 ACT domain CSW12_20285 PF03315 Serine dehydratase beta chain CSW12_20295 PF00753 Metallo-beta-lactamase superfamily CSW12_20295 PF12706 Beta-lactamase superfamily domain CSW12_20315 PF00690 Cation transporter/ATPase, N-terminus CSW12_20315 PF00689 Cation transporting ATPase, C-terminus CSW12_20320 PF02308 MgtC family CSW12_20330 PF11799 impB/mucB/samB family C-terminal domain CSW12_20330 PF00817 impB/mucB/samB family CSW12_20330 PF11798 IMS family HHH motif CSW12_20340 PF01546 Peptidase family M20/M25/M40 CSW12_20340 PF07687 Peptidase dimerisation domain CSW12_20345 PF13302 Acetyltransferase (GNAT) domain CSW12_20360 PF03734 L,D-transpeptidase catalytic domain CSW12_20365 PF11728 Putative aromatic acid exporter C-terminal domain CSW12_20365 PF06081 Aromatic acid exporter family member 1 CSW12_20370 PF00005 ABC transporter CSW12_20375 PF00528 Binding-protein-dependent transport system inner membrane component CSW12_20380 PF00497 Bacterial extracellular solute-binding proteins, family 3 CSW12_20385 PF06491 Disulphide isomerase CSW12_20390 PF11208 Protein of unknown function (DUF2992) CSW12_20395 PF09297 NADH pyrophosphatase zinc ribbon domain CSW12_20395 PF00293 NUDIX domain CSW12_20400 PF04239 Protein of unknown function (DUF421) CSW12_20405 PF01098 Cell cycle protein CSW12_20415 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CSW12_20415 PF02817 e3 binding domain CSW12_20415 PF00364 Biotin-requiring enzyme CSW12_20420 PF02779 Transketolase, pyrimidine binding domain CSW12_20420 PF02780 Transketolase, C-terminal domain CSW12_20425 PF00676 Dehydrogenase E1 component CSW12_20430 PF07992 Pyridine nucleotide-disulphide oxidoreductase CSW12_20430 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CSW12_20435 PF00871 Acetokinase family CSW12_20440 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CSW12_20440 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CSW12_20445 PF01515 Phosphate acetyl/butaryl transferase CSW12_20455 PF00158 Sigma-54 interaction domain CSW12_20455 PF02954 Bacterial regulatory protein, Fis family CSW12_20455 PF00989 PAS fold CSW12_20465 PF03009 Glycerophosphoryl diester phosphodiesterase family CSW12_20470 PF14174 YycC-like protein CSW12_20485 PF08769 Sporulation initiation factor Spo0A C terminal CSW12_20485 PF00072 Response regulator receiver domain CSW12_20495 PF05580 SpoIVB peptidase S55 CSW12_20495 PF17820 PDZ domain CSW12_20500 PF13476 AAA domain CSW12_20505 PF02863 Arginine repressor, C-terminal domain CSW12_20505 PF01316 Arginine repressor, DNA binding domain CSW12_20510 PF01728 FtsJ-like methyltransferase CSW12_20510 PF01479 S4 domain CSW12_20515 PF02779 Transketolase, pyrimidine binding domain CSW12_20515 PF02780 Transketolase, C-terminal domain CSW12_20515 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CSW12_20520 PF00348 Polyprenyl synthetase CSW12_20525 PF02609 Exonuclease VII small subunit CSW12_20530 PF13742 OB-fold nucleic acid binding domain CSW12_20530 PF02601 Exonuclease VII, large subunit CSW12_20535 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CSW12_20535 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CSW12_20540 PF01029 NusB family CSW12_20545 PF03780 Asp23 family, cell envelope-related function CSW12_20550 PF00289 Biotin carboxylase, N-terminal domain CSW12_20550 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CSW12_20550 PF02785 Biotin carboxylase C-terminal domain CSW12_20555 PF00364 Biotin-requiring enzyme CSW12_20565 PF12685 SpoIIIAH-like protein CSW12_20575 PF09581 Stage III sporulation protein AF (Spore_III_AF) CSW12_20580 PF09546 Stage III sporulation protein AE (spore_III_AE) CSW12_20585 PF06686 Stage III sporulation protein AC/AD protein family CSW12_20590 PF06686 Stage III sporulation protein AC/AD protein family CSW12_20595 PF09548 Stage III sporulation protein AB (spore_III_AB) CSW12_20620 PF01132 Elongation factor P (EF-P) OB domain CSW12_20620 PF09285 Elongation factor P, C-terminal CSW12_20620 PF08207 Elongation factor P (EF-P) KOW-like domain CSW12_20625 PF01321 Creatinase/Prolidase N-terminal domain CSW12_20625 PF00557 Metallopeptidase family M24 CSW12_20630 PF01220 Dehydroquinase class II CSW12_20635 PF11085 Conserved membrane protein YqhR CSW12_20640 PF07136 Protein of unknown function (DUF1385) CSW12_20650 PF13419 Haloacid dehalogenase-like hydrolase CSW12_20655 PF01325 Iron dependent repressor, N-terminal DNA binding domain CSW12_20655 PF02742 Iron dependent repressor, metal binding and dimerisation domain CSW12_20680 PF03099 Biotin/lipoate A/B protein ligase family CSW12_20685 PF00581 Rhodanese-like domain CSW12_20695 PF00356 Bacterial regulatory proteins, lacI family CSW12_20695 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CSW12_20705 PF00893 Small Multidrug Resistance protein CSW12_20710 PF00893 Small Multidrug Resistance protein CSW12_20745 PF00005 ABC transporter CSW12_20750 PF00392 Bacterial regulatory proteins, gntR family CSW12_20770 PF02347 Glycine cleavage system P-protein CSW12_20775 PF02347 Glycine cleavage system P-protein CSW12_20780 PF08669 Glycine cleavage T-protein C-terminal barrel domain CSW12_20780 PF01571 Aminomethyltransferase folate-binding domain CSW12_20785 PF00176 SNF2 family N-terminal domain CSW12_20785 PF00271 Helicase conserved C-terminal domain CSW12_20790 PF11079 Bacterial protein YqhG of unknown function CSW12_20815 PF14038 YqzE-like protein CSW12_20820 PF01202 Shikimate kinase CSW12_20865 PF00482 Type II secretion system (T2SS), protein F CSW12_20870 PF00437 Type II/IV secretion system protein CSW12_20880 PF11117 Protein of unknown function (DUF2626) CSW12_20885 PF00375 Sodium:dicarboxylate symporter family CSW12_20925 PF03033 Glycosyltransferase family 28 N-terminal domain CSW12_20925 PF04101 Glycosyltransferase family 28 C-terminal domain CSW12_20930 PF02574 Homocysteine S-methyltransferase CSW12_20930 PF02310 B12 binding domain CSW12_20930 PF02965 Vitamin B12 dependent methionine synthase, activation domain CSW12_20930 PF02607 B12 binding domain CSW12_20930 PF00809 Pterin binding enzyme CSW12_20935 PF02574 Homocysteine S-methyltransferase CSW12_20935 PF02219 Methylenetetrahydrofolate reductase CSW12_20940 PF01053 Cys/Met metabolism PLP-dependent enzyme CSW12_20945 PF01053 Cys/Met metabolism PLP-dependent enzyme CSW12_20955 PF01022 Bacterial regulatory protein, arsR family CSW12_20965 PF00753 Metallo-beta-lactamase superfamily CSW12_20970 PF10958 Protein of unknown function (DUF2759) CSW12_20975 PF00480 ROK family CSW12_20980 PF06014 Bacterial protein of unknown function (DUF910) CSW12_20985 PF01812 5-formyltetrahydrofolate cyclo-ligase family CSW12_20990 PF00471 Ribosomal protein L33 CSW12_20995 PF00483 Nucleotidyl transferase CSW12_21000 PF01895 PhoU domain CSW12_21005 PF00005 ABC transporter CSW12_21010 PF00528 Binding-protein-dependent transport system inner membrane component CSW12_21015 PF00528 Binding-protein-dependent transport system inner membrane component CSW12_21020 PF12849 PBP superfamily domain CSW12_21030 PF07690 Major Facilitator Superfamily CSW12_21035 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CSW12_21035 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CSW12_21045 PF06691 Protein of unknown function (DUF1189) CSW12_21055 PF04551 GcpE protein CSW12_21060 PF01475 Ferric uptake regulator family CSW12_21065 PF00950 ABC 3 transport family CSW12_21070 PF00005 ABC transporter CSW12_21075 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CSW12_21075 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CSW12_21080 PF11116 Protein of unknown function (DUF2624) CSW12_21085 PF01261 Xylose isomerase-like TIM barrel CSW12_21090 PF00271 Helicase conserved C-terminal domain CSW12_21090 PF00270 DEAD/DEAH box helicase CSW12_21100 PF02401 LytB protein CSW12_21105 PF01784 NIF3 (NGG1p interacting factor 3) CSW12_21110 PF04816 tRNA (adenine(22)-N(1))-methyltransferase CSW12_21115 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CSW12_21120 PF04542 Sigma-70 region 2 CSW12_21120 PF00140 Sigma-70 factor, region 1.2 CSW12_21120 PF04539 Sigma-70 region 3 CSW12_21120 PF04545 Sigma-70, region 4 CSW12_21120 PF03979 Sigma-70 factor, region 1.1 CSW12_21125 PF08275 DNA primase catalytic core, N-terminal domain CSW12_21125 PF10410 DnaB-helicase binding domain of primase CSW12_21125 PF01807 CHC2 zinc finger CSW12_21140 PF03618 Kinase/pyrophosphorylase CSW12_21145 PF00571 CBS domain CSW12_21145 PF08279 HTH domain CSW12_21150 PF02565 Recombination protein O C terminal CSW12_21150 PF11967 Recombination protein O N terminal CSW12_21160 PF01926 50S ribosome-binding GTPase CSW12_21160 PF07650 KH domain CSW12_21165 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CSW12_21170 PF01219 Prokaryotic diacylglycerol kinase CSW12_21175 PF02130 Uncharacterized protein family UPF0054 CSW12_21180 PF01966 HD domain CSW12_21180 PF07697 7TM-HD extracellular CSW12_21180 PF07698 7TM receptor with intracellular HD hydrolase CSW12_21185 PF02562 PhoH-like protein CSW12_21190 PF06898 Putative stage IV sporulation protein YqfD CSW12_21195 PF07873 YabP family CSW12_21205 PF09424 Yqey-like protein CSW12_21210 PF01165 Ribosomal protein S21 CSW12_21220 PF01938 TRAM domain CSW12_21220 PF04055 Radical SAM superfamily CSW12_21220 PF00919 Uncharacterized protein family UPF0004 CSW12_21225 PF04452 RNA methyltransferase CSW12_21235 PF00226 DnaJ domain CSW12_21235 PF01556 DnaJ C terminal domain CSW12_21235 PF00684 DnaJ central domain CSW12_21240 PF00012 Hsp70 protein CSW12_21245 PF01025 GrpE CSW12_21250 PF01628 HrcA protein C terminal domain CSW12_21255 PF06969 HemN C-terminal domain CSW12_21255 PF04055 Radical SAM superfamily CSW12_21260 PF01638 HxlR-like helix-turn-helix CSW12_21265 PF03144 Elongation factor Tu domain 2 CSW12_21265 PF00009 Elongation factor Tu GTP binding domain CSW12_21265 PF00679 Elongation factor G C-terminus CSW12_21265 PF06421 GTP-binding protein LepA C-terminus CSW12_21275 PF03418 Germination protease CSW12_21280 PF01649 Ribosomal protein S20 CSW12_21285 PF06144 DNA polymerase III, delta subunit CSW12_21290 PF14141 YqzM-like protein CSW12_21295 PF03772 Competence protein CSW12_21295 PF00753 Metallo-beta-lactamase superfamily CSW12_21295 PF13567 Domain of unknown function (DUF4131) CSW12_21300 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CSW12_21320 PF03807 NADP oxidoreductase coenzyme F420-dependent CSW12_21320 PF14748 Pyrroline-5-carboxylate reductase dimerisation CSW12_21325 PF13649 Methyltransferase domain CSW12_21335 PF01966 HD domain CSW12_21340 PF01467 Cytidylyltransferase-like CSW12_21345 PF01985 CRS1 / YhbY (CRM) domain CSW12_21350 PF01488 Shikimate / quinate 5-dehydrogenase CSW12_21350 PF08501 Shikimate dehydrogenase substrate binding domain CSW12_21350 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CSW12_21355 PF01926 50S ribosome-binding GTPase CSW12_21370 PF02666 Phosphatidylserine decarboxylase CSW12_21375 PF04542 Sigma-70 region 2 CSW12_21375 PF04545 Sigma-70, region 4 CSW12_21390 PF00471 Ribosomal protein L33 CSW12_21395 PF00881 Nitroreductase family CSW12_21400 PF04607 Region found in RelA / SpoT proteins CSW12_21410 PF00245 Alkaline phosphatase CSW12_21415 PF00583 Acetyltransferase (GNAT) family CSW12_21425 PF00561 alpha/beta hydrolase fold CSW12_21425 PF08386 TAP-like protein CSW12_21460 PF02225 PA domain CSW12_21460 PF05922 Peptidase inhibitor I9 CSW12_21460 PF13860 FlgD Ig-like domain CSW12_21460 PF00082 Subtilase family CSW12_21465 PF00351 Biopterin-dependent aromatic amino acid hydroxylase CSW12_21475 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CSW12_21480 PF07681 DoxX CSW12_21515 PF00005 ABC transporter CSW12_21520 PF01032 FecCD transport family CSW12_21525 PF01497 Periplasmic binding protein CSW12_21535 PF14143 YrhC-like protein CSW12_21540 PF00171 Aldehyde dehydrogenase family CSW12_21540 PF00465 Iron-containing alcohol dehydrogenase CSW12_21545 PF01053 Cys/Met metabolism PLP-dependent enzyme CSW12_21550 PF00291 Pyridoxal-phosphate dependent enzyme CSW12_21555 PF01048 Phosphorylase superfamily CSW12_21560 PF08241 Methyltransferase domain CSW12_21575 PF00905 Penicillin binding protein transpeptidase domain CSW12_21575 PF03717 Penicillin-binding Protein dimerisation domain CSW12_21580 PF01272 Transcription elongation factor, GreA/GreB, C-term CSW12_21580 PF03449 Transcription elongation factor, N-terminal CSW12_21585 PF00485 Phosphoribulokinase / Uridine kinase family CSW12_21605 PF02618 YceG-like family CSW12_21610 PF06949 Protein of unknown function (DUF1292) CSW12_21615 PF03652 Holliday junction resolvase CSW12_21625 PF01411 tRNA synthetases class II (A) CSW12_21625 PF02272 DHHA1 domain CSW12_21625 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CSW12_21635 PF01594 AI-2E family transporter CSW12_21655 PF13538 UvrD-like helicase C-terminal domain CSW12_21655 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain CSW12_21655 PF14490 Helix-hairpin-helix containing domain CSW12_21670 PF00266 Aminotransferase class-V CSW12_21675 PF02082 Transcriptional regulator CSW12_21680 PF05496 Holliday junction DNA helicase RuvB P-loop domain CSW12_21680 PF16193 AAA C-terminal domain CSW12_21680 PF12002 MgsA AAA+ ATPase C terminal CSW12_21700 PF00899 ThiF family CSW12_21705 PF00152 tRNA synthetases class II (D, K and N) CSW12_21705 PF02938 GAD domain CSW12_21705 PF01336 OB-fold nucleic acid binding domain CSW12_21710 PF13393 Histidyl-tRNA synthetase CSW12_21710 PF03129 Anticodon binding domain CSW12_21720 PF02580 D-Tyr-tRNA(Tyr) deacylase CSW12_21725 PF13291 ACT domain CSW12_21725 PF02824 TGS domain CSW12_21725 PF04607 Region found in RelA / SpoT proteins CSW12_21730 PF00156 Phosphoribosyl transferase domain CSW12_21735 PF01368 DHH family CSW12_21735 PF02272 DHHA1 domain CSW12_21735 PF17768 RecJ OB domain CSW12_21735 PF10141 Single-strand DNA-specific exonuclease, C terminal domain CSW12_21740 PF01545 Cation efflux family CSW12_21740 PF16916 Dimerisation domain of Zinc Transporter CSW12_21745 PF02355 Protein export membrane protein CSW12_21745 PF07549 SecD/SecF GG Motif CSW12_21755 PF14667 Polysaccharide biosynthesis C-terminal domain CSW12_21755 PF01943 Polysaccharide biosynthesis protein CSW12_21760 PF04239 Protein of unknown function (DUF421) CSW12_21770 PF02699 Preprotein translocase subunit CSW12_21775 PF01702 Queuine tRNA-ribosyltransferase CSW12_21780 PF02547 Queuosine biosynthesis protein CSW12_21785 PF11146 Protein of unknown function (DUF2905) CSW12_21790 PF05496 Holliday junction DNA helicase RuvB P-loop domain CSW12_21790 PF05491 RuvB C-terminal winged helix domain CSW12_21790 PF17864 RuvB AAA lid domain CSW12_21795 PF01330 RuvA N terminal domain CSW12_21795 PF07499 RuvA, C-terminal domain CSW12_21800 PF01497 Periplasmic binding protein CSW12_21820 PF01476 LysM domain CSW12_21825 PF02445 Quinolinate synthetase A protein CSW12_21830 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CSW12_21830 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain CSW12_21835 PF02910 Fumarate reductase flavoprotein C-term CSW12_21835 PF00890 FAD binding domain CSW12_21840 PF00266 Aminotransferase class-V CSW12_21845 PF02829 3H domain CSW12_21845 PF08279 HTH domain CSW12_21850 PF03473 MOSC domain CSW12_21850 PF03475 3-alpha domain CSW12_21855 PF00800 Prephenate dehydratase CSW12_21855 PF01842 ACT domain CSW12_21860 PF02687 FtsX-like permease family CSW12_21865 PF02687 FtsX-like permease family CSW12_21870 PF00005 ABC transporter CSW12_21875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSW12_21880 PF00072 Response regulator receiver domain CSW12_21880 PF00486 Transcriptional regulatory protein, C terminal CSW12_21885 PF09269 Domain of unknown function (DUF1967) CSW12_21885 PF01018 GTP1/OBG CSW12_21885 PF01926 50S ribosome-binding GTPase CSW12_21890 PF14682 Sporulation initiation phospho-transferase B, C-terminal CSW12_21890 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain CSW12_21895 PF01016 Ribosomal L27 protein CSW12_21900 PF04327 Cysteine protease Prp CSW12_21905 PF00829 Ribosomal prokaryotic L21 protein CSW12_21910 PF00575 S1 RNA binding domain CSW12_21910 PF10150 Ribonuclease E/G family CSW12_21915 PF02163 Peptidase family M50 CSW12_21920 PF01551 Peptidase family M23 CSW12_21925 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CSW12_21930 PF03775 Septum formation inhibitor MinC, C-terminal domain CSW12_21940 PF04085 rod shape-determining protein MreC CSW12_21950 PF04002 RadC-like JAB domain CSW12_21955 PF02545 Maf-like protein CSW12_21970 PF02875 Mur ligase family, glutamate ligase domain CSW12_21970 PF08245 Mur ligase middle domain CSW12_21975 PF08264 Anticodon-binding domain of tRNA CSW12_21975 PF00133 tRNA synthetases class I (I, L, M and V) CSW12_21975 PF10458 Valyl tRNA synthetase tRNA binding arm CSW12_21985 PF01476 LysM domain CSW12_21990 PF00202 Aminotransferase class-III CSW12_21995 PF00490 Delta-aminolevulinic acid dehydratase CSW12_22000 PF02602 Uroporphyrinogen-III synthase HemD CSW12_22005 PF03900 Porphobilinogen deaminase, C-terminal domain CSW12_22005 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain CSW12_22010 PF01578 Cytochrome C assembly protein CSW12_22015 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain CSW12_22015 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain CSW12_22015 PF01488 Shikimate / quinate 5-dehydrogenase CSW12_22020 PF01047 MarR family CSW12_22030 PF02566 OsmC-like protein CSW12_22035 PF01926 50S ribosome-binding GTPase CSW12_22040 PF05362 Lon protease (S16) C-terminal proteolytic domain CSW12_22040 PF02190 ATP-dependent protease La (LON) substrate-binding domain CSW12_22040 PF00004 ATPase family associated with various cellular activities (AAA) CSW12_22045 PF00004 ATPase family associated with various cellular activities (AAA) CSW12_22045 PF05362 Lon protease (S16) C-terminal proteolytic domain CSW12_22050 PF10431 C-terminal, D2-small domain, of ClpB protein CSW12_22050 PF06689 ClpX C4-type zinc finger CSW12_22050 PF07724 AAA domain (Cdc48 subfamily) CSW12_22055 PF05697 Bacterial trigger factor protein (TF) CSW12_22055 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CSW12_22055 PF05698 Bacterial trigger factor protein (TF) C-terminus CSW12_22075 PF11724 YvbH-like oligomerisation region CSW12_22075 PF08000 Bacterial PH domain CSW12_22105 PF12850 Calcineurin-like phosphoesterase superfamily domain CSW12_22110 PF01725 Ham1 family CSW12_22115 PF01138 3' exoribonuclease family, domain 1 CSW12_22115 PF03725 3' exoribonuclease family, domain 2 CSW12_22120 PF10646 Sporulation and spore germination CSW12_22125 PF01177 Asp/Glu/Hydantoin racemase CSW12_22130 PF07690 Major Facilitator Superfamily CSW12_22140 PF00440 Bacterial regulatory proteins, tetR family CSW12_22150 PF00196 Bacterial regulatory proteins, luxR family CSW12_22160 PF07969 Amidohydrolase family CSW12_22165 PF04024 PspC domain CSW12_22170 PF07883 Cupin domain CSW12_22170 PF01381 Helix-turn-helix CSW12_22175 PF13536 Putative multidrug resistance efflux transporter CSW12_22180 PF00230 Major intrinsic protein CSW12_22185 PF02082 Transcriptional regulator CSW12_22195 PF00005 ABC transporter CSW12_22195 PF13732 Domain of unknown function (DUF4162) CSW12_22200 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) CSW12_22205 PF13677 Membrane MotB of proton-channel complex MotA/MotB CSW12_22205 PF00691 OmpA family CSW12_22210 PF01618 MotA/TolQ/ExbB proton channel family CSW12_22220 PF02557 D-alanyl-D-alanine carboxypeptidase CSW12_22225 PF03061 Thioesterase superfamily CSW12_22230 PF13085 2Fe-2S iron-sulfur cluster binding domain CSW12_22230 PF13183 4Fe-4S dicluster domain CSW12_22235 PF00890 FAD binding domain CSW12_22235 PF02910 Fumarate reductase flavoprotein C-term CSW12_22240 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CSW12_22245 PF10702 Protein of unknown function (DUF2507) CSW12_22250 PF08459 UvrC Helix-hairpin-helix N-terminal CSW12_22250 PF01541 GIY-YIG catalytic domain CSW12_22250 PF02151 UvrB/uvrC motif CSW12_22255 PF00085 Thioredoxin CSW12_22260 PF01012 Electron transfer flavoprotein domain CSW12_22260 PF00766 Electron transfer flavoprotein FAD-binding domain CSW12_22265 PF01012 Electron transfer flavoprotein domain CSW12_22270 PF00378 Enoyl-CoA hydratase/isomerase CSW12_22275 PF00440 Bacterial regulatory proteins, tetR family CSW12_22275 PF08359 YsiA-like protein, C-terminal region CSW12_22280 PF00501 AMP-binding enzyme CSW12_22280 PF13193 AMP-binding enzyme C-terminal domain CSW12_22295 PF01497 Periplasmic binding protein CSW12_22300 PF01032 FecCD transport family CSW12_22315 PF05163 DinB family CSW12_22345 PF00005 ABC transporter CSW12_22350 PF00512 His Kinase A (phospho-acceptor) domain CSW12_22350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSW12_22355 PF00486 Transcriptional regulatory protein, C terminal CSW12_22355 PF00072 Response regulator receiver domain CSW12_22365 PF09962 Uncharacterized conserved protein (DUF2196) CSW12_22370 PF17785 PUA-like domain CSW12_22370 PF10672 S-adenosylmethionine-dependent methyltransferase CSW12_22375 PF03992 Antibiotic biosynthesis monooxygenase CSW12_22380 PF04203 Sortase domain CSW12_22385 PF00005 ABC transporter CSW12_22390 PF01032 FecCD transport family CSW12_22395 PF01497 Periplasmic binding protein CSW12_22400 PF05031 Iron Transport-associated domain CSW12_22410 PF05031 Iron Transport-associated domain CSW12_22415 PF05525 Branched-chain amino acid transport protein CSW12_22420 PF01479 S4 domain CSW12_22420 PF00849 RNA pseudouridylate synthase CSW12_22430 PF01713 Smr domain CSW12_22430 PF00488 MutS domain V CSW12_22435 PF14791 DNA polymerase beta thumb CSW12_22435 PF14716 Helix-hairpin-helix domain CSW12_22435 PF02811 PHP domain CSW12_22440 PF02674 Colicin V production protein CSW12_22445 PF05164 Cell division protein ZapA CSW12_22450 PF01351 Ribonuclease HII CSW12_22450 PF11858 Domain of unknown function (DUF3378) CSW12_22470 PF00152 tRNA synthetases class II (D, K and N) CSW12_22470 PF01336 OB-fold nucleic acid binding domain CSW12_22475 PF03147 Ferredoxin-fold anticodon binding domain CSW12_22475 PF03483 B3/4 domain CSW12_22475 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CSW12_22475 PF01588 Putative tRNA binding domain CSW12_22475 PF03484 tRNA synthetase B5 domain CSW12_22480 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CSW12_22480 PF01409 tRNA synthetases class II core domain (F) CSW12_22485 PF08032 RNA 2'-O ribose methyltransferase substrate binding CSW12_22485 PF00588 SpoU rRNA Methylase family CSW12_22490 PF14098 Small, acid-soluble spore protein I CSW12_22495 PF01966 HD domain CSW12_22515 PF07690 Major Facilitator Superfamily CSW12_22525 PF16859 Tetracyclin repressor-like, C-terminal domain CSW12_22525 PF00440 Bacterial regulatory proteins, tetR family CSW12_22530 PF05343 M42 glutamyl aminopeptidase CSW12_22540 PF00453 Ribosomal protein L20 CSW12_22545 PF01632 Ribosomal protein L35 CSW12_22550 PF00707 Translation initiation factor IF-3, C-terminal domain CSW12_22550 PF05198 Translation initiation factor IF-3, N-terminal domain CSW12_22555 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CSW12_22555 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CSW12_22555 PF02824 TGS domain CSW12_22555 PF03129 Anticodon binding domain CSW12_22560 PF08812 YtxC-like family CSW12_22570 PF07319 Primosomal protein DnaI N-terminus CSW12_22570 PF01695 IstB-like ATP binding protein CSW12_22575 PF07261 Replication initiation and membrane attachment CSW12_22580 PF03477 ATP cone domain CSW12_22585 PF02675 S-adenosylmethionine decarboxylase CSW12_22595 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CSW12_22595 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CSW12_22600 PF01121 Dephospho-CoA kinase CSW12_22605 PF02659 Putative manganese efflux pump CSW12_22610 PF06827 Zinc finger found in FPG and IleRS CSW12_22610 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CSW12_22610 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CSW12_22615 PF00476 DNA polymerase family A CSW12_22615 PF01367 5'-3' exonuclease, C-terminal SAM fold CSW12_22615 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CSW12_22620 PF16736 Single Cache-like CSW12_22620 PF00989 PAS fold CSW12_22620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSW12_22620 PF00512 His Kinase A (phospho-acceptor) domain CSW12_22625 PF00072 Response regulator receiver domain CSW12_22625 PF00486 Transcriptional regulatory protein, C terminal CSW12_22645 PF00056 lactate/malate dehydrogenase, NAD binding domain CSW12_22645 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CSW12_22650 PF00180 Isocitrate/isopropylmalate dehydrogenase CSW12_22655 PF00285 Citrate synthase, C-terminal domain CSW12_22665 PF04284 Protein of unknown function (DUF441) CSW12_22670 PF01594 AI-2E family transporter CSW12_22675 PF04186 FxsA cytoplasmic membrane protein CSW12_22680 PF00391 PEP-utilising enzyme, mobile domain CSW12_22680 PF00224 Pyruvate kinase, barrel domain CSW12_22680 PF02887 Pyruvate kinase, alpha/beta domain CSW12_22685 PF00365 Phosphofructokinase CSW12_22690 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CSW12_22695 PF01039 Carboxyl transferase domain CSW12_22695 PF17848 Acetyl-coA carboxylase zinc finger domain CSW12_22700 PF00392 Bacterial regulatory proteins, gntR family CSW12_22705 PF03949 Malic enzyme, NAD binding domain CSW12_22705 PF00390 Malic enzyme, N-terminal domain CSW12_22710 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CSW12_22710 PF01336 OB-fold nucleic acid binding domain CSW12_22710 PF02811 PHP domain CSW12_22710 PF14579 Helix-hairpin-helix motif CSW12_22710 PF07733 Bacterial DNA polymerase III alpha NTPase domain CSW12_22715 PF14034 Sporulation protein YtrH CSW12_22725 PF02272 DHHA1 domain CSW12_22725 PF01368 DHH family CSW12_22730 PF14007 YtpI-like protein CSW12_22740 PF00392 Bacterial regulatory proteins, gntR family CSW12_22740 PF07085 DRTGG domain CSW12_22740 PF03061 Thioesterase superfamily CSW12_22740 PF00571 CBS domain CSW12_22755 PF00557 Metallopeptidase family M24 CSW12_22755 PF01321 Creatinase/Prolidase N-terminal domain CSW12_22785 PF12746 GNAT acetyltransferase CSW12_22790 PF07883 Cupin domain CSW12_22800 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CSW12_22800 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CSW12_22810 PF00582 Universal stress protein family CSW12_22825 PF00206 Lyase CSW12_22825 PF14698 Argininosuccinate lyase C-terminal CSW12_22830 PF00764 Arginosuccinate synthase CSW12_22855 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CSW12_22855 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CSW12_22860 PF12787 EcsC protein family CSW12_22875 PF00871 Acetokinase family CSW12_22880 PF02384 N-6 DNA Methylase CSW12_22885 PF08534 Redoxin CSW12_22890 PF09579 Sporulation protein YtfJ (Spore_YtfJ) CSW12_22900 PF01513 ATP-NAD kinase CSW12_22910 PF07969 Amidohydrolase family CSW12_22915 PF04986 Putative transposase CSW12_22915 PF14319 Transposase zinc-binding domain CSW12_22930 PF00501 AMP-binding enzyme CSW12_22930 PF13193 AMP-binding enzyme C-terminal domain CSW12_22935 PF00269 Small, acid-soluble spore proteins, alpha/beta type CSW12_22940 PF02926 THUMP domain CSW12_22940 PF02568 Thiamine biosynthesis protein (ThiI) CSW12_22945 PF00266 Aminotransferase class-V CSW12_22950 PF06160 Septation ring formation regulator, EzrA CSW12_22955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSW12_22955 PF03466 LysR substrate binding domain CSW12_22960 PF00892 EamA-like transporter family CSW12_22965 PF00440 Bacterial regulatory proteins, tetR family CSW12_22970 PF13185 GAF domain CSW12_22975 PF01053 Cys/Met metabolism PLP-dependent enzyme CSW12_22985 PF00163 Ribosomal protein S4/S9 N-terminal domain CSW12_22985 PF01479 S4 domain CSW12_23000 PF01479 S4 domain CSW12_23000 PF00579 tRNA synthetases class I (W and Y) CSW12_23015 PF04542 Sigma-70 region 2 CSW12_23015 PF08281 Sigma-70, region 4 CSW12_23025 PF12464 Maltose acetyltransferase CSW12_23025 PF14602 Hexapeptide repeat of succinyl-transferase CSW12_23030 PF13193 AMP-binding enzyme C-terminal domain CSW12_23030 PF00501 AMP-binding enzyme CSW12_23035 PF00583 Acetyltransferase (GNAT) family CSW12_23040 PF00571 CBS domain CSW12_23045 PF00850 Histone deacetylase domain CSW12_23060 PF00486 Transcriptional regulatory protein, C terminal CSW12_23060 PF00072 Response regulator receiver domain CSW12_23065 PF00512 His Kinase A (phospho-acceptor) domain CSW12_23065 PF00989 PAS fold CSW12_23065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSW12_23065 PF16736 Single Cache-like CSW12_23070 PF12796 Ankyrin repeats (3 copies) CSW12_23075 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CSW12_23080 PF01741 Large-conductance mechanosensitive channel, MscL CSW12_23100 PF00356 Bacterial regulatory proteins, lacI family CSW12_23115 PF00793 DAHP synthetase I family CSW12_23115 PF01817 Chorismate mutase type II CSW12_23120 PF00793 DAHP synthetase I family CSW12_23120 PF01817 Chorismate mutase type II CSW12_23125 PF07537 CamS sex pheromone cAM373 precursor CSW12_23130 PF11009 Protein of unknown function (DUF2847) CSW12_23140 PF02073 Thermophilic metalloprotease (M29) CSW12_23160 PF13302 Acetyltransferase (GNAT) domain CSW12_23165 PF00892 EamA-like transporter family CSW12_23170 PF13411 MerR HTH family regulatory protein CSW12_23175 PF08245 Mur ligase middle domain CSW12_23175 PF02875 Mur ligase family, glutamate ligase domain CSW12_23175 PF01225 Mur ligase family, catalytic domain CSW12_23185 PF17854 FtsK alpha domain CSW12_23185 PF01580 FtsK/SpoIIIE family CSW12_23185 PF09397 Ftsk gamma domain CSW12_23190 PF01520 N-acetylmuramoyl-L-alanine amidase CSW12_23200 PF14794 Domain of unknown function (DUF4479) CSW12_23200 PF01588 Putative tRNA binding domain CSW12_23205 PF07285 Protein of unknown function (DUF1444) CSW12_23210 PF00085 Thioredoxin CSW12_23215 PF01931 Protein of unknown function DUF84 CSW12_23220 PF05343 M42 glutamyl aminopeptidase CSW12_23230 PF00753 Metallo-beta-lactamase superfamily CSW12_23235 PF14319 Transposase zinc-binding domain CSW12_23235 PF04986 Putative transposase CSW12_23240 PF02390 Putative methyltransferase CSW12_23245 PF14165 YtzH-like protein CSW12_23250 PF01636 Phosphotransferase enzyme family CSW12_23255 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CSW12_23255 PF00128 Alpha amylase, catalytic domain CSW12_23255 PF17999 Pullulanase N1-terminal domain CSW12_23260 PF02834 LigT like Phosphoesterase CSW12_23265 PF01546 Peptidase family M20/M25/M40 CSW12_23270 PF08220 DeoR-like helix-turn-helix domain CSW12_23275 PF00849 RNA pseudouridylate synthase CSW12_23275 PF01479 S4 domain CSW12_23280 PF01943 Polysaccharide biosynthesis protein CSW12_23280 PF14667 Polysaccharide biosynthesis C-terminal domain CSW12_23295 PF07690 Major Facilitator Superfamily CSW12_23300 PF01022 Bacterial regulatory protein, arsR family CSW12_23305 PF08327 Activator of Hsp90 ATPase homolog 1-like protein CSW12_23320 PF10957 Sporulation protein Cse60 CSW12_23330 PF02559 CarD-like/TRCF domain CSW12_23340 PF06800 Sugar transport protein CSW12_23355 PF02391 MoaE protein CSW12_23360 PF03205 Molybdopterin guanine dinucleotide synthesis protein B CSW12_23365 PF03454 MoeA C-terminal region (domain IV) CSW12_23365 PF03453 MoeA N-terminal region (domain I and II) CSW12_23365 PF00994 Probable molybdopterin binding domain CSW12_23370 PF01967 MoaC family CSW12_23375 PF00899 ThiF family CSW12_23380 PF04055 Radical SAM superfamily CSW12_23380 PF06463 Molybdenum Cofactor Synthesis C CSW12_23405 PF00581 Rhodanese-like domain CSW12_23415 PF00561 alpha/beta hydrolase fold CSW12_23420 PF03323 Bacillus/Clostridium GerA spore germination protein CSW12_23425 PF03845 Spore germination protein CSW12_23450 PF13603 Leucyl-tRNA synthetase, Domain 2 CSW12_23450 PF08264 Anticodon-binding domain of tRNA CSW12_23450 PF09334 tRNA synthetases class I (M) CSW12_23450 PF00133 tRNA synthetases class I (I, L, M and V) CSW12_23455 PF07690 Major Facilitator Superfamily CSW12_23460 PF00999 Sodium/hydrogen exchanger family CSW12_23465 PF02080 TrkA-C domain CSW12_23470 PF00589 Phage integrase family CSW12_23485 PF00005 ABC transporter CSW12_23490 PF04235 Protein of unknown function (DUF418) CSW12_23490 PF07786 Protein of unknown function (DUF1624) CSW12_23500 PF10732 Protein of unknown function (DUF2524) CSW12_23505 PF16199 Radical_SAM C-terminal domain CSW12_23505 PF04055 Radical SAM superfamily CSW12_23510 PF06962 Putative rRNA methylase CSW12_23520 PF01177 Asp/Glu/Hydantoin racemase CSW12_23540 PF10776 Protein of unknown function (DUF2600) CSW12_23545 PF12146 Serine aminopeptidase, S33 CSW12_23550 PF00132 Bacterial transferase hexapeptide (six repeats) CSW12_23555 PF01569 PAP2 superfamily CSW12_23560 PF00534 Glycosyl transferases group 1 CSW12_23560 PF13439 Glycosyltransferase Family 4 CSW12_23565 PF12804 MobA-like NTP transferase domain CSW12_23570 PF00994 Probable molybdopterin binding domain CSW12_23585 PF02772 S-adenosylmethionine synthetase, central domain CSW12_23585 PF00438 S-adenosylmethionine synthetase, N-terminal domain CSW12_23585 PF02773 S-adenosylmethionine synthetase, C-terminal domain CSW12_23595 PF01293 Phosphoenolpyruvate carboxykinase CSW12_23670 PF00512 His Kinase A (phospho-acceptor) domain CSW12_23670 PF00989 PAS fold CSW12_23670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSW12_23670 PF13188 PAS domain CSW12_23670 PF13426 PAS domain CSW12_23675 PF02743 Cache domain CSW12_23675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSW12_23675 PF00512 His Kinase A (phospho-acceptor) domain CSW12_23680 PF08386 TAP-like protein CSW12_23680 PF00561 alpha/beta hydrolase fold CSW12_23685 PF00884 Sulfatase CSW12_23705 PF00005 ABC transporter CSW12_23710 PF00528 Binding-protein-dependent transport system inner membrane component CSW12_23725 PF13419 Haloacid dehalogenase-like hydrolase CSW12_23735 PF00293 NUDIX domain CSW12_23765 PF02664 S-Ribosylhomocysteinase (LuxS) CSW12_23770 PF01809 Putative membrane protein insertion efficiency factor CSW12_23775 PF00484 Carbonic anhydrase CSW12_23780 PF01654 Cytochrome bd terminal oxidase subunit I CSW12_23785 PF02322 Cytochrome bd terminal oxidase subunit II CSW12_23790 PF10676 Spore germination protein gerPA/gerPF CSW12_23805 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CSW12_23805 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CSW12_23830 PF04012 PspA/IM30 family CSW12_23845 PF07664 Ferrous iron transport protein B C terminus CSW12_23845 PF17910 FeoB cytosolic helical domain CSW12_23845 PF02421 Ferrous iron transport protein B CSW12_23845 PF07670 Nucleoside recognition CSW12_23855 PF09515 Thiamine transporter protein (Thia_YuaJ) CSW12_23860 PF00672 HAMP domain CSW12_23860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSW12_23860 PF00512 His Kinase A (phospho-acceptor) domain CSW12_23865 PF00486 Transcriptional regulatory protein, C terminal CSW12_23865 PF00072 Response regulator receiver domain CSW12_23895 PF00781 Diacylglycerol kinase catalytic domain CSW12_23925 PF09335 SNARE associated Golgi protein CSW12_23930 PF00398 Ribosomal RNA adenine dimethylase CSW12_23935 PF02687 FtsX-like permease family CSW12_23940 PF00005 ABC transporter CSW12_23945 PF12833 Helix-turn-helix domain CSW12_23945 PF06445 GyrI-like small molecule binding domain CSW12_23955 PF13630 SdpI/YhfL protein family CSW12_23955 PF07853 Protein of unknown function (DUF1648) CSW12_23960 PF01022 Bacterial regulatory protein, arsR family CSW12_23965 PF00486 Transcriptional regulatory protein, C terminal CSW12_23965 PF00072 Response regulator receiver domain CSW12_23970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSW12_23985 PF02687 FtsX-like permease family CSW12_23990 PF02687 FtsX-like permease family CSW12_23995 PF00005 ABC transporter CSW12_24000 PF02687 FtsX-like permease family CSW12_24010 PF02447 GntP family permease CSW12_24025 PF07071 KDGP aldolase CSW12_24030 PF03841 L-seryl-tRNA selenium transferase CSW12_24035 PF01979 Amidohydrolase family CSW12_24040 PF02557 D-alanyl-D-alanine carboxypeptidase CSW12_24045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSW12_24045 PF00512 His Kinase A (phospho-acceptor) domain CSW12_24050 PF00486 Transcriptional regulatory protein, C terminal CSW12_24050 PF00072 Response regulator receiver domain CSW12_24060 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CSW12_24060 PF13378 Enolase C-terminal domain-like CSW12_24065 PF00501 AMP-binding enzyme CSW12_24065 PF13193 AMP-binding enzyme C-terminal domain CSW12_24080 PF00378 Enoyl-CoA hydratase/isomerase CSW12_24085 PF00561 alpha/beta hydrolase fold CSW12_24090 PF16582 Middle domain of thiamine pyrophosphate CSW12_24090 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CSW12_24090 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CSW12_24095 PF00425 chorismate binding enzyme CSW12_24100 PF01040 UbiA prenyltransferase family CSW12_24105 PF01258 Prokaryotic dksA/traR C4-type zinc finger CSW12_24110 PF00313 'Cold-shock' DNA-binding domain CSW12_24140 PF00343 Carbohydrate phosphorylase CSW12_24145 PF00534 Glycosyl transferases group 1 CSW12_24145 PF08323 Starch synthase catalytic domain CSW12_24150 PF00483 Nucleotidyl transferase CSW12_24155 PF00483 Nucleotidyl transferase CSW12_24160 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CSW12_24160 PF02806 Alpha amylase, C-terminal all-beta domain CSW12_24160 PF00128 Alpha amylase, catalytic domain CSW12_24170 PF02225 PA domain CSW12_24170 PF00082 Subtilase family CSW12_24170 PF05922 Peptidase inhibitor I9 CSW12_24170 PF13860 FlgD Ig-like domain CSW12_24180 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CSW12_24180 PF00056 lactate/malate dehydrogenase, NAD binding domain CSW12_24185 PF00440 Bacterial regulatory proteins, tetR family CSW12_24325 PF02308 MgtC family CSW12_24330 PF02254 TrkA-N domain CSW12_24330 PF07885 Ion channel CSW12_24335 PF08868 YugN-like family CSW12_24340 PF00342 Phosphoglucose isomerase CSW12_24350 PF04070 Domain of unknown function (DUF378) CSW12_24355 PF00575 S1 RNA binding domain CSW12_24360 PF00155 Aminotransferase class I and II CSW12_24365 PF01037 Lrp/AsnC ligand binding domain CSW12_24370 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CSW12_24370 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CSW12_24375 PF00561 alpha/beta hydrolase fold CSW12_24375 PF08386 TAP-like protein CSW12_24385 PF00155 Aminotransferase class I and II CSW12_24395 PF08810 Kinase associated protein B CSW12_24400 PF00929 Exonuclease CSW12_24405 PF03600 Citrate transporter CSW12_24425 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CSW12_24425 PF03129 Anticodon binding domain CSW12_24430 PF03061 Thioesterase superfamily CSW12_24440 PF02632 BioY family CSW12_24445 PF00483 Nucleotidyl transferase CSW12_24450 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CSW12_24450 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CSW12_24450 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CSW12_24450 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CSW12_24455 PF02457 DisA bacterial checkpoint controller nucleotide-binding CSW12_24455 PF10372 Bacterial membrane-spanning protein N-terminus CSW12_24460 PF02789 Cytosol aminopeptidase family, N-terminal domain CSW12_24460 PF00883 Cytosol aminopeptidase family, catalytic domain CSW12_24465 PF06725 3D domain CSW12_24475 PF13344 Haloacid dehalogenase-like hydrolase CSW12_24475 PF00293 NUDIX domain CSW12_24480 PF07992 Pyridine nucleotide-disulphide oxidoreductase CSW12_24485 PF07992 Pyridine nucleotide-disulphide oxidoreductase CSW12_24495 PF06445 GyrI-like small molecule binding domain CSW12_24510 PF04463 Protein of unknown function (DUF523) CSW12_24545 PF01521 Iron-sulphur cluster biosynthesis CSW12_24550 PF01678 Diaminopimelate epimerase CSW12_24555 PF07293 Protein of unknown function (DUF1450) CSW12_24560 PF07992 Pyridine nucleotide-disulphide oxidoreductase CSW12_24570 PF00664 ABC transporter transmembrane region CSW12_24570 PF03412 Peptidase C39 family CSW12_24570 PF00005 ABC transporter CSW12_24575 PF03649 Uncharacterised protein family (UPF0014) CSW12_24580 PF08274 PhnA Zinc-Ribbon CSW12_24580 PF03831 PhnA domain CSW12_24605 PF07315 Protein of unknown function (DUF1462) CSW12_24610 PF01106 NifU-like domain CSW12_24625 PF04608 Phosphatidylglycerophosphatase A CSW12_24645 PF11202 Phosphoribosyl transferase (PRTase) CSW12_24645 PF15608 PELOTA RNA binding domain CSW12_24655 PF02525 Flavodoxin-like fold CSW12_24660 PF13344 Haloacid dehalogenase-like hydrolase CSW12_24670 PF01934 Protein of unknown function DUF86 CSW12_24675 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded CSW12_24695 PF06265 Protein of unknown function (DUF1027) CSW12_24700 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) CSW12_24705 PF13411 MerR HTH family regulatory protein CSW12_24705 PF07739 TipAS antibiotic-recognition domain CSW12_24710 PF10086 YhfC intramembrane metalloprotease CSW12_24730 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family CSW12_24730 PF04055 Radical SAM superfamily CSW12_24735 PF01551 Peptidase family M23 CSW12_24740 PF09560 Sporulation protein YunB (Spo_YunB) CSW12_24745 PF08827 Domain of unknown function (DUF1805) CSW12_24760 PF01458 Uncharacterized protein family (UPF0051) CSW12_24765 PF01592 NifU-like N terminal domain CSW12_24770 PF00266 Aminotransferase class-V CSW12_24775 PF01458 Uncharacterized protein family (UPF0051) CSW12_24780 PF00005 ABC transporter CSW12_24785 PF03180 NLPA lipoprotein CSW12_24790 PF03180 NLPA lipoprotein CSW12_24795 PF00528 Binding-protein-dependent transport system inner membrane component CSW12_24800 PF09383 NIL domain CSW12_24800 PF00005 ABC transporter CSW12_24810 PF00085 Thioredoxin CSW12_24815 PF01751 Toprim domain CSW12_24825 PF01597 Glycine cleavage H-protein CSW12_24830 PF03960 ArsC family CSW12_24850 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CSW12_24850 PF00056 lactate/malate dehydrogenase, NAD binding domain CSW12_24870 PF00440 Bacterial regulatory proteins, tetR family CSW12_24870 PF13305 Tetracyclin repressor-like, C-terminal domain CSW12_24875 PF00753 Metallo-beta-lactamase superfamily CSW12_24880 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CSW12_24880 PF02770 Acyl-CoA dehydrogenase, middle domain CSW12_24880 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CSW12_24885 PF00108 Thiolase, N-terminal domain CSW12_24885 PF02803 Thiolase, C-terminal domain CSW12_24890 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CSW12_24890 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CSW12_24890 PF00378 Enoyl-CoA hydratase/isomerase CSW12_24895 PF14115 YuzL-like protein CSW12_24900 PF07943 Penicillin-binding protein 5, C-terminal domain CSW12_24900 PF00768 D-alanyl-D-alanine carboxypeptidase CSW12_24905 PF01619 Proline dehydrogenase CSW12_24910 PF10835 Protein of unknown function (DUF2573) CSW12_24915 PF01910 Thiamine-binding protein CSW12_24920 PF02743 Cache domain CSW12_24920 PF00672 HAMP domain CSW12_24920 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CSW12_24935 PF07690 Major Facilitator Superfamily CSW12_24940 PF13520 Amino acid permease CSW12_24955 PF02096 60Kd inner membrane protein CSW12_24965 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CSW12_24965 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CSW12_25005 PF09335 SNARE associated Golgi protein CSW12_25015 PF17969 L,D-transpeptidase C-terminal domain CSW12_25015 PF03734 L,D-transpeptidase catalytic domain CSW12_25020 PF00486 Transcriptional regulatory protein, C terminal CSW12_25020 PF00072 Response regulator receiver domain CSW12_25025 PF16736 Single Cache-like CSW12_25025 PF00512 His Kinase A (phospho-acceptor) domain CSW12_25025 PF00989 PAS fold CSW12_25025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSW12_25040 PF09334 tRNA synthetases class I (M) CSW12_25040 PF08264 Anticodon-binding domain of tRNA CSW12_25050 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CSW12_25050 PF02743 Cache domain CSW12_25050 PF00672 HAMP domain CSW12_25055 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CSW12_25055 PF02743 Cache domain CSW12_25055 PF00672 HAMP domain CSW12_25060 PF01883 Iron-sulfur cluster assembly protein CSW12_25065 PF01447 Thermolysin metallopeptidase, catalytic domain CSW12_25065 PF03413 Peptidase propeptide and YPEB domain CSW12_25065 PF02868 Thermolysin metallopeptidase, alpha-helical domain CSW12_25065 PF07504 Fungalysin/Thermolysin Propeptide Motif CSW12_25070 PF17954 Quercetinase C-terminal cupin domain CSW12_25070 PF02678 Pirin CSW12_25075 PF01047 MarR family CSW12_25085 PF09335 SNARE associated Golgi protein CSW12_25090 PF00999 Sodium/hydrogen exchanger family CSW12_25095 PF02080 TrkA-C domain CSW12_25105 PF01235 Sodium:alanine symporter family CSW12_25110 PF00210 Ferritin-like domain CSW12_25125 PF03641 Possible lysine decarboxylase CSW12_25135 PF00210 Ferritin-like domain CSW12_25145 PF07786 Protein of unknown function (DUF1624) CSW12_25145 PF04235 Protein of unknown function (DUF418) CSW12_25150 PF07662 Na+ dependent nucleoside transporter C-terminus CSW12_25150 PF01773 Na+ dependent nucleoside transporter N-terminus CSW12_25155 PF01773 Na+ dependent nucleoside transporter N-terminus CSW12_25155 PF07662 Na+ dependent nucleoside transporter C-terminus CSW12_25160 PF01235 Sodium:alanine symporter family CSW12_25165 PF01235 Sodium:alanine symporter family CSW12_25170 PF13460 NAD(P)H-binding CSW12_25195 PF00248 Aldo/keto reductase family CSW12_25200 PF07690 Major Facilitator Superfamily CSW12_25210 PF01638 HxlR-like helix-turn-helix CSW12_25215 PF07849 Protein of unknown function (DUF1641) CSW12_25220 PF07992 Pyridine nucleotide-disulphide oxidoreductase CSW12_25225 PF00579 tRNA synthetases class I (W and Y) CSW12_25225 PF01479 S4 domain CSW12_25230 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CSW12_25230 PF01565 FAD binding domain CSW12_25250 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CSW12_25255 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CSW12_25270 PF07690 Major Facilitator Superfamily CSW12_25275 PF00005 ABC transporter CSW12_25275 PF12848 ABC transporter CSW12_25280 PF13302 Acetyltransferase (GNAT) domain CSW12_25285 PF06146 Phosphate-starvation-inducible E CSW12_25295 PF00857 Isochorismatase family CSW12_25310 PF01037 Lrp/AsnC ligand binding domain CSW12_25315 PF00484 Carbonic anhydrase CSW12_25320 PF02560 Cyanate lyase C-terminal domain CSW12_25325 PF00860 Permease family CSW12_25330 PF17440 Thiol-activated cytolysin beta sandwich domain CSW12_25330 PF01289 Thiol-activated cytolysin CSW12_25335 PF00005 ABC transporter CSW12_25340 PF01032 FecCD transport family CSW12_25345 PF01032 FecCD transport family CSW12_25355 PF00072 Response regulator receiver domain CSW12_25355 PF00486 Transcriptional regulatory protein, C terminal CSW12_25365 PF01668 SmpB protein CSW12_25370 PF00773 RNB domain CSW12_25370 PF08206 Ribonuclease B OB domain CSW12_25370 PF00575 S1 RNA binding domain CSW12_25370 PF17876 Cold shock domain CSW12_25375 PF12146 Serine aminopeptidase, S33 CSW12_25380 PF03840 Preprotein translocase SecG subunit CSW12_25385 PF04172 LrgB-like family CSW12_25390 PF03788 LrgA family CSW12_25395 PF01156 Inosine-uridine preferring nucleoside hydrolase CSW12_25400 PF03952 Enolase, N-terminal domain CSW12_25400 PF00113 Enolase, C-terminal TIM barrel domain CSW12_25405 PF06415 BPG-independent PGAM N-terminus (iPGM_N) CSW12_25405 PF01676 Metalloenzyme superfamily CSW12_25410 PF00121 Triosephosphate isomerase CSW12_25415 PF00162 Phosphoglycerate kinase CSW12_25420 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CSW12_25420 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CSW12_25425 PF04198 Putative sugar-binding domain CSW12_25435 PF04552 Sigma-54, DNA binding domain CSW12_25435 PF04963 Sigma-54 factor, core binding domain CSW12_25435 PF00309 Sigma-54 factor, Activator interacting domain (AID) CSW12_25450 PF13732 Domain of unknown function (DUF4162) CSW12_25450 PF00005 ABC transporter CSW12_25455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSW12_25455 PF07730 Histidine kinase CSW12_25460 PF00072 Response regulator receiver domain CSW12_25460 PF00196 Bacterial regulatory proteins, luxR family CSW12_25480 PF03862 SpoVAC/SpoVAEB sporulation membrane protein CSW12_25485 PF07451 Stage V sporulation protein AD (SpoVAD) CSW12_25490 PF03862 SpoVAC/SpoVAEB sporulation membrane protein CSW12_25500 PF04239 Protein of unknown function (DUF421) CSW12_25505 PF00574 Clp protease CSW12_25515 PF00381 PTS HPr component phosphorylation site CSW12_25520 PF14527 WhiA LAGLIDADG-like domain CSW12_25520 PF02650 WhiA C-terminal HTH domain CSW12_25520 PF10298 WhiA N-terminal LAGLIDADG-like domain CSW12_25525 PF01933 Uncharacterised protein family UPF0052 CSW12_25530 PF03668 P-loop ATPase protein family CSW12_25535 PF00293 NUDIX domain CSW12_25545 PF07992 Pyridine nucleotide-disulphide oxidoreductase CSW12_25555 PF14602 Hexapeptide repeat of succinyl-transferase CSW12_25560 PF13419 Haloacid dehalogenase-like hydrolase CSW12_25565 PF01790 Prolipoprotein diacylglyceryl transferase CSW12_25570 PF07475 HPr Serine kinase C-terminal domain CSW12_25570 PF02603 HPr Serine kinase N terminus CSW12_25575 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV CSW12_25580 PF17755 UvrA DNA-binding domain CSW12_25580 PF17760 UvrA interaction domain CSW12_25580 PF00005 ABC transporter CSW12_25585 PF17757 UvrB interaction domain CSW12_25585 PF12344 Ultra-violet resistance protein B CSW12_25585 PF02151 UvrB/uvrC motif CSW12_25585 PF04851 Type III restriction enzyme, res subunit CSW12_25585 PF00271 Helicase conserved C-terminal domain CSW12_25600 PF13411 MerR HTH family regulatory protein CSW12_25600 PF07739 TipAS antibiotic-recognition domain CSW12_25625 PF03601 Conserved hypothetical protein 698 CSW12_25630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSW12_25630 PF03466 LysR substrate binding domain CSW12_25635 PF09278 MerR, DNA binding CSW12_25635 PF00376 MerR family regulatory protein CSW12_25640 PF03358 NADPH-dependent FMN reductase CSW12_25645 PF00005 ABC transporter CSW12_25645 PF12848 ABC transporter CSW12_25645 PF16326 ABC transporter C-terminal domain CSW12_25650 PF01906 Putative heavy-metal-binding CSW12_25655 PF00664 ABC transporter transmembrane region CSW12_25655 PF00005 ABC transporter CSW12_25660 PF17820 PDZ domain CSW12_25665 PF01471 Putative peptidoglycan binding domain CSW12_25665 PF03572 Peptidase family S41 CSW12_25665 PF17820 PDZ domain CSW12_25670 PF18075 FtsX extracellular domain CSW12_25670 PF02687 FtsX-like permease family CSW12_25675 PF00005 ABC transporter CSW12_25680 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CSW12_25695 PF07516 SecA Wing and Scaffold domain CSW12_25695 PF00271 Helicase conserved C-terminal domain CSW12_25695 PF01043 SecA preprotein cross-linking domain CSW12_25695 PF07517 SecA DEAD-like domain CSW12_25695 PF02810 SEC-C motif CSW12_25705 PF00005 ABC transporter CSW12_25735 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus CSW12_25735 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CSW12_25740 PF00313 'Cold-shock' DNA-binding domain CSW12_25755 PF01476 LysM domain CSW12_25755 PF00877 NlpC/P60 family CSW12_25760 PF01638 HxlR-like helix-turn-helix CSW12_25770 PF02645 Uncharacterised protein, DegV family COG1307 CSW12_25775 PF01205 Uncharacterized protein family UPF0029 CSW12_25775 PF09186 Domain of unknown function (DUF1949) CSW12_25780 PF03816 Cell envelope-related transcriptional attenuator domain CSW12_25785 PF02350 UDP-N-acetylglucosamine 2-epimerase CSW12_25795 PF00953 Glycosyl transferase family 4 CSW12_25805 PF00874 PRD domain CSW12_25805 PF00158 Sigma-54 interaction domain CSW12_25805 PF03610 PTS system fructose IIA component CSW12_25815 PF02417 Chromate transporter CSW12_25820 PF04794 YdjC-like protein CSW12_25825 PF11975 Family 4 glycosyl hydrolase C-terminal domain CSW12_25825 PF02056 Family 4 glycosyl hydrolase CSW12_25830 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CSW12_25835 PF02378 Phosphotransferase system, EIIC CSW12_25840 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CSW12_25850 PF02675 S-adenosylmethionine decarboxylase CSW12_25855 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CSW12_25860 PF02378 Phosphotransferase system, EIIC CSW12_25865 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CSW12_25870 PF00375 Sodium:dicarboxylate symporter family CSW12_25890 PF03466 LysR substrate binding domain CSW12_25890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSW12_25905 PF01654 Cytochrome bd terminal oxidase subunit I CSW12_25910 PF02322 Cytochrome bd terminal oxidase subunit II CSW12_25915 PF02040 Arsenical pump membrane protein CSW12_25920 PF01964 Radical SAM ThiC family CSW12_25920 PF13667 ThiC-associated domain CSW12_25945 PF02652 L-lactate permease CSW12_25950 PF14319 Transposase zinc-binding domain CSW12_25950 PF04986 Putative transposase CSW12_25960 PF09988 Uncharacterized metal-binding protein (DUF2227) CSW12_25975 PF00884 Sulfatase CSW12_25985 PF01063 Amino-transferase class IV CSW12_25990 PF01476 LysM domain CSW12_25990 PF00877 NlpC/P60 family CSW12_25995 PF01773 Na+ dependent nucleoside transporter N-terminus CSW12_25995 PF07662 Na+ dependent nucleoside transporter C-terminus CSW12_26015 PF02028 BCCT, betaine/carnitine/choline family transporter CSW12_26025 PF01476 LysM domain CSW12_26025 PF06725 3D domain CSW12_26050 PF04434 SWIM zinc finger CSW12_26055 PF00271 Helicase conserved C-terminal domain CSW12_26055 PF00176 SNF2 family N-terminal domain CSW12_26055 PF12419 SNF2 Helicase protein CSW12_26085 PF04542 Sigma-70 region 2 CSW12_26085 PF04545 Sigma-70, region 4 CSW12_26090 PF04893 Yip1 domain CSW12_26095 PF02687 FtsX-like permease family CSW12_26095 PF12704 MacB-like periplasmic core domain CSW12_26100 PF00005 ABC transporter CSW12_26120 PF07690 Major Facilitator Superfamily CSW12_26135 PF00989 PAS fold CSW12_26135 PF00512 His Kinase A (phospho-acceptor) domain CSW12_26135 PF16736 Single Cache-like CSW12_26135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSW12_26140 PF00072 Response regulator receiver domain CSW12_26140 PF00486 Transcriptional regulatory protein, C terminal CSW12_26145 PF16363 GDP-mannose 4,6 dehydratase CSW12_26155 PF03816 Cell envelope-related transcriptional attenuator domain CSW12_26165 PF01501 Glycosyl transferase family 8 CSW12_26165 PF00535 Glycosyl transferase family 2 CSW12_26175 PF00534 Glycosyl transferases group 1 CSW12_26175 PF13439 Glycosyltransferase Family 4 CSW12_26180 PF02397 Bacterial sugar transferase CSW12_26185 PF01370 NAD dependent epimerase/dehydratase family CSW12_26190 PF07478 D-ala D-ala ligase C-terminus CSW12_26190 PF01820 D-ala D-ala ligase N-terminus CSW12_26195 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CSW12_26200 PF02719 Polysaccharide biosynthesis protein CSW12_26205 PF00483 Nucleotidyl transferase CSW12_26215 PF13614 AAA domain CSW12_26220 PF02706 Chain length determinant protein CSW12_26220 PF13807 G-rich domain on putative tyrosine kinase CSW12_26225 PF13614 AAA domain CSW12_26230 PF07977 FabA-like domain CSW12_26240 PF12116 Stage III sporulation protein D CSW12_26250 PF01551 Peptidase family M23 CSW12_26260 PF00005 ABC transporter CSW12_26265 PF04397 LytTr DNA-binding domain CSW12_26265 PF00072 Response regulator receiver domain CSW12_26270 PF08486 Stage II sporulation protein CSW12_26275 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CSW12_26285 PF06612 Protein of unknown function (DUF1146) CSW12_26290 PF00361 Proton-conducting membrane transporter CSW12_26295 PF00361 Proton-conducting membrane transporter CSW12_26300 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CSW12_26300 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus CSW12_26300 PF00361 Proton-conducting membrane transporter CSW12_26305 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CSW12_26310 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 CSW12_26320 PF00146 NADH dehydrogenase CSW12_26325 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CSW12_26330 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CSW12_26335 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CSW12_26340 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 CSW12_26345 PF00990 Diguanylate cyclase, GGDEF domain CSW12_26345 PF00563 EAL domain CSW12_26345 PF03707 Bacterial signalling protein N terminal repeat CSW12_26360 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CSW12_26360 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain CSW12_26365 PF02874 ATP synthase alpha/beta family, beta-barrel domain CSW12_26365 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CSW12_26375 PF00231 ATP synthase CSW12_26380 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CSW12_26380 PF02874 ATP synthase alpha/beta family, beta-barrel domain CSW12_26380 PF00306 ATP synthase alpha/beta chain, C terminal domain CSW12_26385 PF00213 ATP synthase delta (OSCP) subunit CSW12_26390 PF00430 ATP synthase B/B' CF(0) CSW12_26395 PF00137 ATP synthase subunit C CSW12_26400 PF00119 ATP synthase A chain CSW12_26405 PF03899 ATP synthase I chain CSW12_26425 PF00464 Serine hydroxymethyltransferase CSW12_26435 PF04260 Protein of unknown function (DUF436) CSW12_26440 PF02502 Ribose/Galactose Isomerase CSW12_26445 PF01451 Low molecular weight phosphotyrosine protein phosphatase CSW12_26455 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CSW12_26460 PF07681 DoxX CSW12_26465 PF01613 Flavin reductase like domain CSW12_26475 PF02659 Putative manganese efflux pump CSW12_26480 PF01300 Telomere recombination CSW12_26480 PF03481 Putative GTP-binding controlling metal-binding CSW12_26490 PF09551 Stage II sporulation protein R (spore_II_R) CSW12_26495 PF13847 Methyltransferase domain CSW12_26495 PF17827 PrmC N-terminal domain CSW12_26500 PF00472 RF-1 domain CSW12_26500 PF03462 PCRF domain CSW12_26505 PF00265 Thymidine kinase CSW12_26510 PF01197 Ribosomal protein L31 CSW12_26520 PF07497 Rho termination factor, RNA-binding domain CSW12_26520 PF07498 Rho termination factor, N-terminal domain CSW12_26520 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CSW12_26525 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded CSW12_26530 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CSW12_26535 PF01116 Fructose-bisphosphate aldolase class-II CSW12_26540 PF00072 Response regulator receiver domain CSW12_26545 PF10740 Domain of unknown function (DUF2529) CSW12_26550 PF00117 Glutamine amidotransferase class-I CSW12_26550 PF06418 CTP synthase N-terminus CSW12_26555 PF05066 HB1, ASXL, restriction endonuclease HTH domain CSW12_26565 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CSW12_26565 PF02770 Acyl-CoA dehydrogenase, middle domain CSW12_26565 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CSW12_26570 PF02770 Acyl-CoA dehydrogenase, middle domain CSW12_26570 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CSW12_26570 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CSW12_26575 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CSW12_26575 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CSW12_26580 PF00108 Thiolase, N-terminal domain CSW12_26580 PF02803 Thiolase, C-terminal domain CSW12_26585 PF13183 4Fe-4S dicluster domain CSW12_26585 PF02754 Cysteine-rich domain CSW12_26595 PF13091 PLD-like domain CSW12_26600 PF03851 UV-endonuclease UvdE CSW12_26605 PF00990 Diguanylate cyclase, GGDEF domain CSW12_26605 PF00563 EAL domain CSW12_26605 PF03707 Bacterial signalling protein N terminal repeat CSW12_26620 PF01447 Thermolysin metallopeptidase, catalytic domain CSW12_26620 PF02868 Thermolysin metallopeptidase, alpha-helical domain CSW12_26620 PF07504 Fungalysin/Thermolysin Propeptide Motif CSW12_26620 PF03413 Peptidase propeptide and YPEB domain CSW12_26625 PF00196 Bacterial regulatory proteins, luxR family CSW12_26625 PF00072 Response regulator receiver domain CSW12_26630 PF07730 Histidine kinase CSW12_26630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSW12_26640 PF00005 ABC transporter CSW12_26645 PF00557 Metallopeptidase family M24 CSW12_26660 PF04389 Peptidase family M28 CSW12_26660 PF02225 PA domain CSW12_26670 PF08281 Sigma-70, region 4 CSW12_26670 PF04542 Sigma-70 region 2 CSW12_26675 PF05746 DALR anticodon binding domain CSW12_26675 PF03485 Arginyl tRNA synthetase N terminal domain CSW12_26675 PF00750 tRNA synthetases class I (R) CSW12_26680 PF09148 Domain of unknown function (DUF1934) CSW12_26685 PF02016 LD-carboxypeptidase N-terminal domain CSW12_26685 PF17676 LD-carboxypeptidase C-terminal domain CSW12_26705 PF00491 Arginase family CSW12_26710 PF17284 Spermidine synthase tetramerisation domain CSW12_26715 PF07690 Major Facilitator Superfamily CSW12_26720 PF13411 MerR HTH family regulatory protein CSW12_26725 PF03009 Glycerophosphoryl diester phosphodiesterase family CSW12_26730 PF00905 Penicillin binding protein transpeptidase domain CSW12_26730 PF00912 Transglycosylase CSW12_26735 PF08741 YwhD family CSW12_26740 PF02163 Peptidase family M50 CSW12_26745 PF01361 Tautomerase enzyme CSW12_26750 PF01966 HD domain CSW12_26755 PF01497 Periplasmic binding protein CSW12_26760 PF00005 ABC transporter CSW12_26765 PF01032 FecCD transport family CSW12_26770 PF01032 FecCD transport family CSW12_26775 PF07293 Protein of unknown function (DUF1450) CSW12_26785 PF03099 Biotin/lipoate A/B protein ligase family CSW12_26790 PF01515 Phosphate acetyl/butaryl transferase CSW12_26800 PF07943 Penicillin-binding protein 5, C-terminal domain CSW12_26800 PF00768 D-alanyl-D-alanine carboxypeptidase CSW12_26805 PF07486 Cell Wall Hydrolase CSW12_26810 PF09671 Spore coat protein (Spore_GerQ) CSW12_26815 PF04241 Protein of unknown function (DUF423) CSW12_26830 PF07885 Ion channel CSW12_26830 PF02254 TrkA-N domain CSW12_26835 PF00860 Permease family CSW12_26845 PF12823 Domain of unknown function (DUF3817) CSW12_26850 PF03167 Uracil DNA glycosylase superfamily CSW12_26855 PF12679 ABC-2 family transporter protein CSW12_26860 PF00005 ABC transporter CSW12_26865 PF13472 GDSL-like Lipase/Acylhydrolase family CSW12_26870 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CSW12_26870 PF00356 Bacterial regulatory proteins, lacI family CSW12_26880 PF03447 Homoserine dehydrogenase, NAD binding domain CSW12_26880 PF00742 Homoserine dehydrogenase CSW12_26880 PF01842 ACT domain CSW12_26885 PF04204 Homoserine O-succinyltransferase CSW12_26890 PF01053 Cys/Met metabolism PLP-dependent enzyme CSW12_26900 PF13419 Haloacid dehalogenase-like hydrolase CSW12_26905 PF00027 Cyclic nucleotide-binding domain CSW12_26910 PF02525 Flavodoxin-like fold CSW12_26915 PF00196 Bacterial regulatory proteins, luxR family CSW12_26915 PF00072 Response regulator receiver domain CSW12_26920 PF13185 GAF domain CSW12_26920 PF07730 Histidine kinase CSW12_26925 PF08543 Phosphomethylpyrimidine kinase CSW12_26930 PF00990 Diguanylate cyclase, GGDEF domain CSW12_26930 PF07694 5TMR of 5TMR-LYT CSW12_26935 PF04328 Selenoprotein, putative CSW12_26940 PF02554 Carbon starvation protein CstA CSW12_26940 PF13722 5TM C-terminal transporter carbon starvation CstA CSW12_26945 PF00072 Response regulator receiver domain CSW12_26945 PF04397 LytTr DNA-binding domain CSW12_26950 PF07690 Major Facilitator Superfamily CSW12_26955 PF03808 Glycosyl transferase WecB/TagA/CpsF family CSW12_26960 PF13439 Glycosyltransferase Family 4 CSW12_26960 PF00534 Glycosyl transferases group 1 CSW12_26970 PF03458 UPF0126 domain CSW12_26975 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CSW12_26985 PF03061 Thioesterase superfamily CSW12_26995 PF00535 Glycosyl transferase family 2 CSW12_27005 PF12848 ABC transporter CSW12_27005 PF00005 ABC transporter CSW12_27020 PF00535 Glycosyl transferase family 2 CSW12_27025 PF00440 Bacterial regulatory proteins, tetR family CSW12_27030 PF00873 AcrB/AcrD/AcrF family CSW12_27035 PF01625 Peptide methionine sulfoxide reductase CSW12_27035 PF01641 SelR domain CSW12_27040 PF01594 AI-2E family transporter CSW12_27045 PF04172 LrgB-like family CSW12_27050 PF03788 LrgA family CSW12_27055 PF04397 LytTr DNA-binding domain CSW12_27055 PF00072 Response regulator receiver domain CSW12_27060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSW12_27060 PF13492 GAF domain CSW12_27060 PF07694 5TMR of 5TMR-LYT CSW12_27060 PF06580 Histidine kinase CSW12_27065 PF07690 Major Facilitator Superfamily CSW12_27070 PF02028 BCCT, betaine/carnitine/choline family transporter CSW12_27075 PF02898 Nitric oxide synthase, oxygenase domain CSW12_27085 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CSW12_27085 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CSW12_27095 PF02293 AmiS/UreI family transporter CSW12_27105 PF16363 GDP-mannose 4,6 dehydratase CSW12_27110 PF13276 HTH-like domain CSW12_27110 PF00665 Integrase core domain CSW12_27110 PF13333 Integrase core domain CSW12_27115 PF13333 Integrase core domain CSW12_27115 PF00665 Integrase core domain CSW12_27135 PF03551 Transcriptional regulator PadR-like family CSW12_27140 PF00005 ABC transporter CSW12_27140 PF00664 ABC transporter transmembrane region CSW12_27145 PF00069 Protein kinase domain CSW12_27175 PF03006 Haemolysin-III related CSW12_27190 PF00271 Helicase conserved C-terminal domain CSW12_27190 PF03880 DbpA RNA binding domain CSW12_27190 PF00270 DEAD/DEAH box helicase CSW12_27195 PF00478 IMP dehydrogenase / GMP reductase domain CSW12_27200 PF01432 Peptidase family M3 CSW12_27200 PF08439 Oligopeptidase F CSW12_27210 PF00512 His Kinase A (phospho-acceptor) domain CSW12_27210 PF00989 PAS fold CSW12_27210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSW12_27210 PF13188 PAS domain CSW12_27210 PF13426 PAS domain CSW12_27215 PF02590 Predicted SPOUT methyltransferase CSW12_27225 PF13180 PDZ domain CSW12_27230 PF00753 Metallo-beta-lactamase superfamily CSW12_27235 PF09648 YycH protein CSW12_27245 PF13426 PAS domain CSW12_27245 PF00512 His Kinase A (phospho-acceptor) domain CSW12_27245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSW12_27245 PF00672 HAMP domain CSW12_27250 PF00072 Response regulator receiver domain CSW12_27250 PF00486 Transcriptional regulatory protein, C terminal CSW12_27275 PF00709 Adenylosuccinate synthetase CSW12_27280 PF03796 DnaB-like helicase C terminal domain CSW12_27280 PF00772 DnaB-like helicase N terminal domain CSW12_27285 PF01281 Ribosomal protein L9, N-terminal domain CSW12_27285 PF03948 Ribosomal protein L9, C-terminal domain CSW12_27290 PF01368 DHH family CSW12_27290 PF02272 DHHA1 domain CSW12_27295 PF09991 Predicted membrane protein (DUF2232) CSW12_27300 PF01084 Ribosomal protein S18 CSW12_27305 PF00436 Single-strand binding protein family CSW12_27310 PF01250 Ribosomal protein S6 CSW12_27315 PF01926 50S ribosome-binding GTPase CSW12_27315 PF06071 Protein of unknown function (DUF933) CSW12_27320 PF06107 Bacterial protein of unknown function (DUF951) CSW12_27325 PF00924 Mechanosensitive ion channel CSW12_27330 PF06866 Protein of unknown function (DUF1256) CSW12_27335 PF02195 ParB-like nuclease domain CSW12_27335 PF17762 HTH domain found in ParB protein CSW12_27340 PF13614 AAA domain CSW12_27345 PF17762 HTH domain found in ParB protein CSW12_27345 PF02195 ParB-like nuclease domain CSW12_27350 PF02527 rRNA small subunit methyltransferase G CSW12_27355 PF01134 Glucose inhibited division protein A CSW12_27355 PF13932 GidA associated domain CSW12_27360 PF12631 MnmE helical domain CSW12_27360 PF10396 GTP-binding protein TrmE N-terminus CSW12_27360 PF01926 50S ribosome-binding GTPase CSW12_27365 PF14804 Jag N-terminus CSW12_27365 PF01424 R3H domain CSW12_27370 PF02096 60Kd inner membrane protein CSW12_27375 PF00825 Ribonuclease P CSW12_27380 PF00468 Ribosomal protein L34 CSW12_27385 PF00308 Bacterial dnaA protein CSW12_27385 PF08299 Bacterial dnaA protein helix-turn-helix CSW12_27385 PF11638 DnaA N-terminal domain CSW12_27390 PF02768 DNA polymerase III beta subunit, C-terminal domain CSW12_27390 PF00712 DNA polymerase III beta subunit, N-terminal domain CSW12_27390 PF02767 DNA polymerase III beta subunit, central domain CSW12_27400 PF02463 RecF/RecN/SMC N terminal domain CSW12_27405 PF01751 Toprim domain CSW12_27405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSW12_27405 PF00986 DNA gyrase B subunit, carboxyl terminus CSW12_27405 PF00204 DNA gyrase B CSW12_27410 PF00521 DNA gyrase/topoisomerase IV, subunit A CSW12_27410 PF03989 DNA gyrase C-terminal domain, beta-propeller CSW12_27440 PF14175 YaaC-like Protein CSW12_27445 PF00478 IMP dehydrogenase / GMP reductase domain CSW12_27445 PF00571 CBS domain CSW12_27450 PF07943 Penicillin-binding protein 5, C-terminal domain CSW12_27450 PF00768 D-alanyl-D-alanine carboxypeptidase CSW12_27455 PF01680 SOR/SNZ family CSW12_27460 PF01174 SNO glutamine amidotransferase family CSW12_27465 PF02403 Seryl-tRNA synthetase N-terminal domain CSW12_27465 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CSW12_27480 PF01712 Deoxynucleoside kinase CSW12_27485 PF01712 Deoxynucleoside kinase CSW12_27490 PF00857 Isochorismatase family CSW12_27500 PF14437 MafB19-like deaminase CSW12_27510 PF12169 DNA polymerase III subunits gamma and tau domain III CSW12_27515 PF02575 YbaB/EbfC DNA-binding family CSW12_27520 PF13662 Toprim domain CSW12_27520 PF02132 RecR protein CSW12_27525 PF10704 Protein of unknown function (DUF2508) CSW12_27530 PF07441 SigmaK-factor processing regulatory protein BofA CSW12_27565 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CSW12_27565 PF01276 Orn/Lys/Arg decarboxylase, major domain CSW12_27570 PF02223 Thymidylate kinase CSW12_27575 PF09115 DNA polymerase III, delta subunit, C terminal CSW12_27580 PF04468 PSP1 C-terminal conserved region CSW12_27585 PF06156 Initiation control protein YabA CSW12_27590 PF05175 Methyltransferase small domain CSW12_27595 PF01541 GIY-YIG catalytic domain CSW12_27600 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CSW12_27605 PF18277 AbrB C-terminal domain CSW12_27605 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin CSW12_27610 PF08264 Anticodon-binding domain of tRNA CSW12_27610 PF01588 Putative tRNA binding domain CSW12_27610 PF09334 tRNA synthetases class I (M) CSW12_27615 PF01026 TatD related DNase CSW12_27620 PF13331 Domain of unknown function (DUF4093) CSW12_27620 PF13662 Toprim domain CSW12_27625 PF00398 Ribosomal RNA adenine dimethylase CSW12_27630 PF05582 YabG peptidase U57 CSW12_27635 PF06257 Biofilm formation stimulator VEG CSW12_27640 PF00269 Small, acid-soluble spore proteins, alpha/beta type CSW12_27645 PF00288 GHMP kinases N terminal domain CSW12_27645 PF08544 GHMP kinases C terminal CSW12_27650 PF00156 Phosphoribosyl transferase domain CSW12_27650 PF09182 Bacterial purine repressor, N-terminal CSW12_27655 PF01042 Endoribonuclease L-PSP CSW12_27660 PF04026 SpoVG CSW12_27665 PF00132 Bacterial transferase hexapeptide (six repeats) CSW12_27665 PF00483 Nucleotidyl transferase CSW12_27670 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CSW12_27670 PF14572 Phosphoribosyl synthetase-associated domain CSW12_27675 PF01195 Peptidyl-tRNA hydrolase CSW12_27685 PF00271 Helicase conserved C-terminal domain CSW12_27685 PF02559 CarD-like/TRCF domain CSW12_27685 PF03461 TRCF domain CSW12_27685 PF17757 UvrB interaction domain CSW12_27685 PF00270 DEAD/DEAH box helicase CSW12_27690 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin CSW12_27690 PF15714 Stage V sporulation protein T C-terminal, transcription factor CSW12_27695 PF01943 Polysaccharide biosynthesis protein CSW12_27695 PF14667 Polysaccharide biosynthesis C-terminal domain CSW12_27700 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CSW12_27700 PF03819 MazG nucleotide pyrophosphohydrolase domain CSW12_27705 PF01479 S4 domain CSW12_27710 PF07873 YabP family CSW12_27715 PF09578 Spore cortex protein YabQ (Spore_YabQ) CSW12_27725 PF00575 S1 RNA binding domain CSW12_27740 PF07228 Stage II sporulation protein E (SpoIIE) CSW12_27745 PF11734 TilS substrate C-terminal domain CSW12_27745 PF09179 TilS substrate binding domain CSW12_27745 PF01171 PP-loop family CSW12_27755 PF00004 ATPase family associated with various cellular activities (AAA) CSW12_27755 PF17862 AAA+ lid domain CSW12_27755 PF06480 FtsH Extracellular CSW12_27755 PF01434 Peptidase family M41 CSW12_27760 PF03309 Type III pantothenate kinase CSW12_27765 PF01430 Hsp33 protein CSW12_27770 PF00291 Pyridoxal-phosphate dependent enzyme CSW12_27775 PF00425 chorismate binding enzyme CSW12_27775 PF04715 Anthranilate synthase component I, N terminal region CSW12_27780 PF00117 Glutamine amidotransferase class-I CSW12_27785 PF01063 Amino-transferase class IV CSW12_27790 PF00809 Pterin binding enzyme CSW12_27795 PF02152 Dihydroneopterin aldolase CSW12_27800 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CSW12_27805 PF01381 Helix-turn-helix CSW12_27810 PF01207 Dihydrouridine synthase (Dus) CSW12_27815 PF00152 tRNA synthetases class II (D, K and N) CSW12_27815 PF01336 OB-fold nucleic acid binding domain CSW12_27895 PF05848 CtsR N-terminal HTH domain CSW12_27895 PF17727 CtsR C-terminal dimerization domain CSW12_27900 PF02151 UvrB/uvrC motif CSW12_27905 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain CSW12_27910 PF07724 AAA domain (Cdc48 subfamily) CSW12_27910 PF00004 ATPase family associated with various cellular activities (AAA) CSW12_27910 PF02861 Clp amino terminal domain, pathogenicity island component CSW12_27910 PF17871 AAA lid domain CSW12_27910 PF10431 C-terminal, D2-small domain, of ClpB protein CSW12_27915 PF18073 Rubredoxin metal binding domain CSW12_27920 PF10635 DisA bacterial checkpoint controller linker region CSW12_27920 PF02457 DisA bacterial checkpoint controller nucleotide-binding CSW12_27930 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CSW12_27935 PF02542 YgbB family CSW12_27940 PF00749 tRNA synthetases class I (E and Q), catalytic domain CSW12_27945 PF00132 Bacterial transferase hexapeptide (six repeats) CSW12_27945 PF06426 Serine acetyltransferase, N-terminal CSW12_27950 PF09190 DALR domain CSW12_27950 PF01406 tRNA synthetases class I (C) catalytic domain CSW12_27955 PF00636 Ribonuclease III domain CSW12_27960 PF00588 SpoU rRNA Methylase family CSW12_27960 PF08032 RNA 2'-O ribose methyltransferase substrate binding CSW12_27965 PF05991 YacP-like NYN domain CSW12_27970 PF08281 Sigma-70, region 4 CSW12_27970 PF04542 Sigma-70 region 2 CSW12_27975 PF00471 Ribosomal protein L33 CSW12_27980 PF00584 SecE/Sec61-gamma subunits of protein translocation complex CSW12_27985 PF00467 KOW motif CSW12_27985 PF02357 Transcription termination factor nusG CSW12_27990 PF03946 Ribosomal protein L11, N-terminal domain CSW12_27990 PF00298 Ribosomal protein L11, RNA binding domain CSW12_27995 PF00687 Ribosomal protein L1p/L10e family CSW12_28000 PF00466 Ribosomal protein L10 CSW12_28010 PF05175 Methyltransferase small domain CSW12_28015 PF04563 RNA polymerase beta subunit CSW12_28015 PF04565 RNA polymerase Rpb2, domain 3 CSW12_28015 PF10385 RNA polymerase beta subunit external 1 domain CSW12_28015 PF00562 RNA polymerase Rpb2, domain 6 CSW12_28015 PF04560 RNA polymerase Rpb2, domain 7 CSW12_28015 PF04561 RNA polymerase Rpb2, domain 2 CSW12_28025 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family CSW12_28030 PF00164 Ribosomal protein S12/S23 CSW12_28035 PF00177 Ribosomal protein S7p/S5e CSW12_28040 PF00679 Elongation factor G C-terminus CSW12_28040 PF14492 Elongation Factor G, domain II CSW12_28040 PF03764 Elongation factor G, domain IV CSW12_28040 PF00009 Elongation factor Tu GTP binding domain CSW12_28040 PF03144 Elongation factor Tu domain 2 CSW12_28045 PF03143 Elongation factor Tu C-terminal domain CSW12_28045 PF03144 Elongation factor Tu domain 2 CSW12_28045 PF00009 Elongation factor Tu GTP binding domain CSW12_28055 PF00338 Ribosomal protein S10p/S20e CSW12_28060 PF00297 Ribosomal protein L3 CSW12_28065 PF00573 Ribosomal protein L4/L1 family CSW12_28070 PF00276 Ribosomal protein L23 CSW12_28075 PF00181 Ribosomal Proteins L2, RNA binding domain CSW12_28075 PF03947 Ribosomal Proteins L2, C-terminal domain CSW12_28080 PF00203 Ribosomal protein S19 CSW12_28085 PF00237 Ribosomal protein L22p/L17e CSW12_28090 PF07650 KH domain CSW12_28090 PF00189 Ribosomal protein S3, C-terminal domain CSW12_28095 PF00252 Ribosomal protein L16p/L10e CSW12_28100 PF00831 Ribosomal L29 protein CSW12_28105 PF00366 Ribosomal protein S17 CSW12_28110 PF00238 Ribosomal protein L14p/L23e CSW12_28115 PF00467 KOW motif CSW12_28115 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 CSW12_28120 PF00281 Ribosomal protein L5 CSW12_28120 PF00673 ribosomal L5P family C-terminus CSW12_28125 PF00253 Ribosomal protein S14p/S29e CSW12_28130 PF00410 Ribosomal protein S8 CSW12_28135 PF00347 Ribosomal protein L6 CSW12_28140 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CSW12_28145 PF00333 Ribosomal protein S5, N-terminal domain CSW12_28145 PF03719 Ribosomal protein S5, C-terminal domain CSW12_28150 PF00327 Ribosomal protein L30p/L7e CSW12_28155 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CSW12_28160 PF00344 SecY translocase CSW12_28165 PF05191 Adenylate kinase, active site lid CSW12_28170 PF00557 Metallopeptidase family M24 CSW12_28175 PF01176 Translation initiation factor 1A / IF-1 CSW12_28180 PF00444 Ribosomal protein L36 CSW12_28185 PF00416 Ribosomal protein S13/S18 CSW12_28190 PF00411 Ribosomal protein S11 CSW12_28195 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CSW12_28195 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CSW12_28195 PF01000 RNA polymerase Rpb3/RpoA insert domain CSW12_28200 PF01196 Ribosomal protein L17 CSW12_28205 PF00005 ABC transporter CSW12_28210 PF00005 ABC transporter CSW12_28215 PF02361 Cobalt transport protein CSW12_28220 PF01416 tRNA pseudouridine synthase CSW12_28225 PF00572 Ribosomal protein L13 CSW12_28230 PF00380 Ribosomal protein S9/S16 CSW12_28240 PF01520 N-acetylmuramoyl-L-alanine amidase CSW12_28245 PF10609 NUBPL iron-transfer P-loop NTPase CSW12_28250 PF17898 Spore germination GerD central core domain CSW12_28255 PF14089 KinB-signalling pathway activation in sporulation CSW12_28260 PF01522 Polysaccharide deacetylase CSW12_28335 PF02595 Glycerate kinase family CSW12_28340 PF00491 Arginase family CSW12_28345 PF02457 DisA bacterial checkpoint controller nucleotide-binding CSW12_28350 PF07949 YbbR-like protein CSW12_28355 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CSW12_28355 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CSW12_28355 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CSW12_28355 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CSW12_28365 PF01380 SIS domain CSW12_28370 PF00326 Prolyl oligopeptidase family CSW12_28370 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region CSW12_28395 PF00528 Binding-protein-dependent transport system inner membrane component CSW12_28400 PF09383 NIL domain CSW12_28400 PF00005 ABC transporter CSW12_28405 PF03180 NLPA lipoprotein CSW12_28410 PF00107 Zinc-binding dehydrogenase CSW12_28410 PF08240 Alcohol dehydrogenase GroES-like domain CSW12_28420 PF01565 FAD binding domain CSW12_28425 PF07690 Major Facilitator Superfamily CSW12_28435 PF07690 Major Facilitator Superfamily CSW12_28455 PF00528 Binding-protein-dependent transport system inner membrane component CSW12_28460 PF00528 Binding-protein-dependent transport system inner membrane component CSW12_28460 PF12911 N-terminal TM domain of oligopeptide transport permease C CSW12_28465 PF00005 ABC transporter CSW12_28465 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CSW12_28470 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CSW12_28470 PF00005 ABC transporter CSW12_28475 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CSW12_28490 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CSW12_28495 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CSW12_28500 PF00248 Aldo/keto reductase family CSW12_28505 PF14748 Pyrroline-5-carboxylate reductase dimerisation CSW12_28505 PF03807 NADP oxidoreductase coenzyme F420-dependent CSW12_28515 PF04973 Nicotinamide mononucleotide transporter CSW12_28520 PF06800 Sugar transport protein CSW12_28525 PF00528 Binding-protein-dependent transport system inner membrane component CSW12_28535 PF12728 Helix-turn-helix domain CSW12_28535 PF12727 PBP superfamily domain CSW12_28545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CSW12_28545 PF03466 LysR substrate binding domain CSW12_28550 PF00892 EamA-like transporter family CSW12_28555 PF14142 YrzO-like protein CSW12_28565 PF01553 Acyltransferase CSW12_28580 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CSW12_28580 PF00356 Bacterial regulatory proteins, lacI family CSW12_28590 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CSW12_28590 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CSW12_28610 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) CSW12_28640 PF16326 ABC transporter C-terminal domain CSW12_28640 PF12848 ABC transporter CSW12_28640 PF00005 ABC transporter CSW12_28655 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CSW12_28660 PF00528 Binding-protein-dependent transport system inner membrane component CSW12_28670 PF00005 ABC transporter CSW12_28670 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CSW12_28675 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CSW12_28675 PF00005 ABC transporter CSW12_28710 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CSW12_28715 PF01557 Fumarylacetoacetate (FAA) hydrolase family CSW12_28725 PF13520 Amino acid permease CSW12_28730 PF07690 Major Facilitator Superfamily CSW12_28735 PF07478 D-ala D-ala ligase C-terminus CSW12_28735 PF01820 D-ala D-ala ligase N-terminus CSW12_28740 PF02875 Mur ligase family, glutamate ligase domain CSW12_28740 PF08245 Mur ligase middle domain CSW12_28740 PF01225 Mur ligase family, catalytic domain CSW12_28745 PF00270 DEAD/DEAH box helicase CSW12_28745 PF00271 Helicase conserved C-terminal domain CSW12_28755 PF01694 Rhomboid family CSW12_28760 PF01648 4'-phosphopantetheinyl transferase superfamily CSW12_28770 PF01168 Alanine racemase, N-terminal domain CSW12_28770 PF00842 Alanine racemase, C-terminal domain CSW12_28775 PF01402 Ribbon-helix-helix protein, copG family CSW12_28780 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system CSW12_28785 PF16921 Tex protein YqgF-like domain CSW12_28785 PF00575 S1 RNA binding domain CSW12_28785 PF09371 Tex-like protein N-terminal domain CSW12_28785 PF17674 HHH domain CSW12_28795 PF10263 SprT-like family CSW12_28795 PF17283 SprT-like zinc ribbon domain CSW12_28885 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE CSW12_28890 PF00814 Glycoprotease family CSW12_28895 PF00583 Acetyltransferase (GNAT) family CSW12_28900 PF00814 Glycoprotease family CSW12_28905 PF16326 ABC transporter C-terminal domain CSW12_28905 PF00005 ABC transporter CSW12_28905 PF12848 ABC transporter CSW12_28910 PF06971 Putative DNA-binding protein N-terminus CSW12_28910 PF02629 CoA binding domain CSW12_28920 PF02517 CPBP intramembrane metalloprotease CSW12_28925 PF00166 Chaperonin 10 Kd subunit CSW12_28930 PF00118 TCP-1/cpn60 chaperonin family CSW12_28935 PF02540 NAD synthase CSW12_28935 PF00117 Glutamine amidotransferase class-I CSW12_28935 PF00958 GMP synthase C terminal domain CSW12_28940 PF00860 Permease family CSW12_28945 PF00072 Response regulator receiver domain CSW12_28945 PF00486 Transcriptional regulatory protein, C terminal CSW12_28950 PF00989 PAS fold CSW12_28950 PF16736 Single Cache-like CSW12_28950 PF00512 His Kinase A (phospho-acceptor) domain CSW12_28950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CSW12_28980 PF01323 DSBA-like thioredoxin domain CSW12_29000 PF00155 Aminotransferase class I and II CSW12_29000 PF00392 Bacterial regulatory proteins, gntR family CSW12_29005 PF01619 Proline dehydrogenase CSW12_29055 PF00535 Glycosyl transferase family 2 CSW12_29075 PF00892 EamA-like transporter family CSW12_29130 PF00535 Glycosyl transferase family 2 CSW12_29145 PF00239 Resolvase, N terminal domain CSW12_29145 PF02796 Helix-turn-helix domain of resolvase CSW12_29150 PF07786 Protein of unknown function (DUF1624) CSW12_29150 PF04235 Protein of unknown function (DUF418) CSW12_29155 PF01022 Bacterial regulatory protein, arsR family CSW12_29185 PF13610 DDE domain CSW12_29220 PF13333 Integrase core domain CSW12_29220 PF00665 Integrase core domain CSW12_29220 PF13276 HTH-like domain CSW12_29225 PF13610 DDE domain CSW12_29235 PF01609 Transposase DDE domain CSW12_29345 PF01348 Type II intron maturase CSW12_29345 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CSW12_29420 PF01580 FtsK/SpoIIIE family CSW12_29420 PF09397 Ftsk gamma domain CSW12_29420 PF17854 FtsK alpha domain CSW12_29475 PF14040 Deoxyribonuclease NucA/NucB CSW12_29480 PF00589 Phage integrase family CSW12_29490 PF13610 DDE domain CSW12_29495 PF00581 Rhodanese-like domain CSW12_29510 PF02661 Fic/DOC family CSW12_29520 PF13610 DDE domain CSW12_29530 PF00005 ABC transporter CSW12_29535 PF13610 DDE domain CSW12_29590 PF13610 DDE domain CSW12_29600 PF02600 Disulfide bond formation protein DsbB CSW12_29605 PF13610 DDE domain CSW12_29615 PF13700 Domain of unknown function (DUF4158) CSW12_29615 PF01526 Tn3 transposase DDE domain CSW12_29620 PF02796 Helix-turn-helix domain of resolvase CSW12_29620 PF00239 Resolvase, N terminal domain CSW12_29635 PF01609 Transposase DDE domain CSW12_29645 PF13610 DDE domain CSW12_29650 PF13333 Integrase core domain CSW12_29650 PF00665 Integrase core domain CSW12_29650 PF13276 HTH-like domain CSW12_29675 PF02796 Helix-turn-helix domain of resolvase CSW12_29675 PF00239 Resolvase, N terminal domain CSW12_29680 PF07786 Protein of unknown function (DUF1624) CSW12_29680 PF04235 Protein of unknown function (DUF418) CSW12_29685 PF01022 Bacterial regulatory protein, arsR family CSW12_29715 PF13610 DDE domain CSW12_29750 PF13276 HTH-like domain CSW12_29750 PF00665 Integrase core domain CSW12_29750 PF13333 Integrase core domain CSW12_29755 PF13610 DDE domain CSW12_29785 PF01548 Transposase CSW12_29785 PF02371 Transposase IS116/IS110/IS902 family CSW12_29815 PF01381 Helix-turn-helix CSW12_29845 PF18801 response regulator aspartate phosphatase H, N terminal CSW12_29845 PF13176 Tetratricopeptide repeat CSW12_29905 PF02607 B12 binding domain CSW12_29905 PF13411 MerR HTH family regulatory protein CSW12_29950 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) CSW12_29960 PF03845 Spore germination protein CSW12_29965 PF05504 Spore germination B3/ GerAC like, C-terminal CSW12_29990 PF01740 STAS domain CSW12_29990 PF00916 Sulfate permease family CSW12_29995 PF00484 Carbonic anhydrase CSW12_30015 PF01757 Acyltransferase family CSW12_30020 PF01752 Collagenase CSW12_30020 PF18496 Collagenase G catalytic helper subdomain CSW12_30020 PF08453 Peptidase family M9 N-terminal CSW12_30020 PF04151 Bacterial pre-peptidase C-terminal domain CSW12_30040 PF00239 Resolvase, N terminal domain CSW12_30040 PF02796 Helix-turn-helix domain of resolvase CSW12_30045 PF13610 DDE domain CSW12_30110 PF00581 Rhodanese-like domain CSW12_30130 PF02796 Helix-turn-helix domain of resolvase CSW12_30130 PF00239 Resolvase, N terminal domain CSW12_30135 PF01526 Tn3 transposase DDE domain CSW12_30135 PF13700 Domain of unknown function (DUF4158) CSW12_30155 PF00145 C-5 cytosine-specific DNA methylase CSW12_30160 PF00145 C-5 cytosine-specific DNA methylase CSW12_30175 PF13610 DDE domain CSW12_30190 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin CSW12_30190 PF18277 AbrB C-terminal domain CSW12_30195 PF17209 Hfq protein CSW12_30200 PF00216 Bacterial DNA-binding protein CSW12_30205 PF01022 Bacterial regulatory protein, arsR family CSW12_30235 PF02796 Helix-turn-helix domain of resolvase CSW12_30235 PF00239 Resolvase, N terminal domain CSW12_30240 PF13610 DDE domain CSW12_30265 PF00535 Glycosyl transferase family 2 CSW12_30285 PF01609 Transposase DDE domain CSW12_30300 PF13610 DDE domain CSW12_30305 PF03323 Bacillus/Clostridium GerA spore germination protein CSW12_30310 PF01609 Transposase DDE domain CSW12_30315 PF13700 Domain of unknown function (DUF4158) CSW12_30315 PF01526 Tn3 transposase DDE domain CSW12_30335 PF01609 Transposase DDE domain CSW12_30345 PF07737 Anthrax toxin lethal factor, N- and C-terminal domain CSW12_30345 PF03496 ADP-ribosyltransferase exoenzyme CSW12_30355 PF07691 PA14 domain CSW12_30355 PF17475 Clostridial binary toxin B/anthrax toxin PA domain 2 CSW12_30355 PF03495 Clostridial binary toxin B/anthrax toxin PA Ca-binding domain CSW12_30355 PF17476 Clostridial binary toxin B/anthrax toxin PA domain 3 CSW12_30370 PF04235 Protein of unknown function (DUF418) CSW12_30370 PF07786 Protein of unknown function (DUF1624) CSW12_30375 PF02796 Helix-turn-helix domain of resolvase CSW12_30375 PF00239 Resolvase, N terminal domain CSW12_30380 PF01526 Tn3 transposase DDE domain CSW12_30380 PF13700 Domain of unknown function (DUF4158) CSW12_30385 PF00239 Resolvase, N terminal domain CSW12_30385 PF02796 Helix-turn-helix domain of resolvase CSW12_30390 PF00239 Resolvase, N terminal domain CSW12_30390 PF02796 Helix-turn-helix domain of resolvase CSW12_30420 PF01022 Bacterial regulatory protein, arsR family CSW12_30425 PF00216 Bacterial DNA-binding protein CSW12_30430 PF17209 Hfq protein CSW12_30435 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin CSW12_30435 PF18277 AbrB C-terminal domain CSW12_30475 PF01348 Type II intron maturase CSW12_30475 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CSW12_30525 PF00877 NlpC/P60 family CSW12_30545 PF02371 Transposase IS116/IS110/IS902 family CSW12_30545 PF01548 Transposase CSW12_30575 PF01381 Helix-turn-helix CSW12_30595 PF00817 impB/mucB/samB family CSW12_30635 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CSW12_30645 PF00239 Resolvase, N terminal domain CSW12_30645 PF02796 Helix-turn-helix domain of resolvase CSW12_30650 PF13700 Domain of unknown function (DUF4158) CSW12_30650 PF01526 Tn3 transposase DDE domain CSW12_30680 PF02796 Helix-turn-helix domain of resolvase CSW12_30680 PF00239 Resolvase, N terminal domain CSW12_30690 PF00245 Alkaline phosphatase CSW12_30720 PF05504 Spore germination B3/ GerAC like, C-terminal CSW12_30725 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) CSW12_30740 PF01757 Acyltransferase family CSW12_30765 PF00484 Carbonic anhydrase CSW12_30770 PF00916 Sulfate permease family CSW12_30770 PF01740 STAS domain CSW12_30895 PF00486 Transcriptional regulatory protein, C terminal CSW12_30895 PF00072 Response regulator receiver domain CSW12_30945 PF01381 Helix-turn-helix CSW12_31015 PF02534 Type IV secretory system Conjugative DNA transfer CSW12_31050 PF00877 NlpC/P60 family CSW12_31095 PF18840 Large polyvalent protein associated domain 25 CSW12_31110 PF01131 DNA topoisomerase CSW12_31110 PF01751 Toprim domain CSW12_31110 PF13342 C-terminal repeat of topoisomerase CSW12_31120 PF01396 Topoisomerase DNA binding C4 zinc finger CSW12_31120 PF01751 Toprim domain CSW12_31120 PF01131 DNA topoisomerase CSW12_31135 PF00436 Single-strand binding protein family CSW12_31140 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin CSW12_31140 PF18277 AbrB C-terminal domain CSW12_31145 PF00216 Bacterial DNA-binding protein CSW12_31155 PF01693 Caulimovirus viroplasmin CSW12_31160 PF01022 Bacterial regulatory protein, arsR family CSW12_31235 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CSW12_31260 PF02796 Helix-turn-helix domain of resolvase CSW12_31260 PF00239 Resolvase, N terminal domain CSW12_31265 PF08863 YolD-like protein CSW12_31270 PF00817 impB/mucB/samB family CSW12_31270 PF11799 impB/mucB/samB family C-terminal domain CSW12_31270 PF11798 IMS family HHH motif