locus-tag class description PFY08_00005 PF00308 Bacterial dnaA protein PFY08_00005 PF08299 Bacterial dnaA protein helix-turn-helix PFY08_00005 PF11638 DnaA N-terminal domain PFY08_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain PFY08_00010 PF02767 DNA polymerase III beta subunit, central domain PFY08_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain PFY08_00020 PF02463 RecF/RecN/SMC N terminal domain PFY08_00025 PF00204 DNA gyrase B PFY08_00025 PF00986 DNA gyrase B subunit, carboxyl terminus PFY08_00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PFY08_00025 PF01751 Toprim domain PFY08_00030 PF00521 DNA gyrase/topoisomerase IV, subunit A PFY08_00030 PF03989 DNA gyrase C-terminal domain, beta-propeller PFY08_00060 PF14175 YaaC-like Protein PFY08_00065 PF00571 CBS domain PFY08_00065 PF00478 IMP dehydrogenase / GMP reductase domain PFY08_00070 PF07943 Penicillin-binding protein 5, C-terminal domain PFY08_00070 PF00768 D-alanyl-D-alanine carboxypeptidase PFY08_00075 PF01680 SOR/SNZ family PFY08_00080 PF01174 SNO glutamine amidotransferase family PFY08_00085 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) PFY08_00085 PF02403 Seryl-tRNA synthetase N-terminal domain PFY08_00100 PF01712 Deoxynucleoside kinase PFY08_00105 PF01712 Deoxynucleoside kinase PFY08_00110 PF00857 Isochorismatase family PFY08_00115 PF14437 MafB19-like deaminase PFY08_00125 PF12169 DNA polymerase III subunits gamma and tau domain III PFY08_00130 PF02575 YbaB/EbfC DNA-binding family PFY08_00135 PF13662 Toprim domain PFY08_00135 PF02132 RecR protein PFY08_00140 PF10704 Protein of unknown function (DUF2508) PFY08_00145 PF07441 SigmaK-factor processing regulatory protein BofA PFY08_00180 PF01276 Orn/Lys/Arg decarboxylase, major domain PFY08_00180 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain PFY08_00185 PF02223 Thymidylate kinase PFY08_00190 PF09115 DNA polymerase III, delta subunit, C terminal PFY08_00195 PF04468 PSP1 C-terminal conserved region PFY08_00200 PF06156 Initiation control protein YabA PFY08_00205 PF05175 Methyltransferase small domain PFY08_00210 PF01541 GIY-YIG catalytic domain PFY08_00215 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases PFY08_00220 PF18277 AbrB C-terminal domain PFY08_00220 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin PFY08_00225 PF09334 tRNA synthetases class I (M) PFY08_00225 PF01588 Putative tRNA binding domain PFY08_00225 PF08264 Anticodon-binding domain of tRNA PFY08_00230 PF01026 TatD related DNase PFY08_00235 PF13662 Toprim domain PFY08_00235 PF13331 Domain of unknown function (DUF4093) PFY08_00240 PF00398 Ribosomal RNA adenine dimethylase PFY08_00245 PF05582 YabG peptidase U57 PFY08_00250 PF06257 Biofilm formation stimulator VEG PFY08_00255 PF00269 Small, acid-soluble spore proteins, alpha/beta type PFY08_00260 PF00288 GHMP kinases N terminal domain PFY08_00260 PF08544 GHMP kinases C terminal PFY08_00265 PF00156 Phosphoribosyl transferase domain PFY08_00265 PF09182 Bacterial purine repressor, N-terminal PFY08_00270 PF01042 Endoribonuclease L-PSP PFY08_00275 PF04026 SpoVG PFY08_00280 PF00483 Nucleotidyl transferase PFY08_00280 PF00132 Bacterial transferase hexapeptide (six repeats) PFY08_00285 PF14572 Phosphoribosyl synthetase-associated domain PFY08_00285 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase PFY08_00290 PF01195 Peptidyl-tRNA hydrolase PFY08_00300 PF02559 CarD-like/TRCF domain PFY08_00300 PF00270 DEAD/DEAH box helicase PFY08_00300 PF03461 TRCF domain PFY08_00300 PF17757 UvrB interaction domain PFY08_00300 PF00271 Helicase conserved C-terminal domain PFY08_00305 PF15714 Stage V sporulation protein T C-terminal, transcription factor PFY08_00305 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin PFY08_00310 PF14667 Polysaccharide biosynthesis C-terminal domain PFY08_00310 PF01943 Polysaccharide biosynthesis protein PFY08_00315 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases PFY08_00315 PF03819 MazG nucleotide pyrophosphohydrolase domain PFY08_00320 PF01479 S4 domain PFY08_00325 PF07873 YabP family PFY08_00330 PF09578 Spore cortex protein YabQ (Spore_YabQ) PFY08_00340 PF00575 S1 RNA binding domain PFY08_00355 PF07228 Stage II sporulation protein E (SpoIIE) PFY08_00360 PF11734 TilS substrate C-terminal domain PFY08_00360 PF09179 TilS substrate binding domain PFY08_00360 PF01171 PP-loop family PFY08_00365 PF00156 Phosphoribosyl transferase domain PFY08_00370 PF01434 Peptidase family M41 PFY08_00370 PF17862 AAA+ lid domain PFY08_00370 PF06480 FtsH Extracellular PFY08_00370 PF00004 ATPase family associated with various cellular activities (AAA) PFY08_00375 PF03309 Type III pantothenate kinase PFY08_00380 PF01430 Hsp33 protein PFY08_00385 PF00291 Pyridoxal-phosphate dependent enzyme PFY08_00390 PF00425 chorismate binding enzyme PFY08_00390 PF04715 Anthranilate synthase component I, N terminal region PFY08_00395 PF00117 Glutamine amidotransferase class-I PFY08_00400 PF01063 Amino-transferase class IV PFY08_00405 PF00809 Pterin binding enzyme PFY08_00410 PF02152 Dihydroneopterin aldolase PFY08_00415 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) PFY08_00420 PF01381 Helix-turn-helix PFY08_00425 PF01207 Dihydrouridine synthase (Dus) PFY08_00430 PF00152 tRNA synthetases class II (D, K and N) PFY08_00430 PF01336 OB-fold nucleic acid binding domain PFY08_00510 PF05848 CtsR N-terminal HTH domain PFY08_00510 PF17727 CtsR C-terminal dimerization domain PFY08_00515 PF02151 UvrB/uvrC motif PFY08_00520 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain PFY08_00525 PF00004 ATPase family associated with various cellular activities (AAA) PFY08_00525 PF10431 C-terminal, D2-small domain, of ClpB protein PFY08_00525 PF02861 Clp amino terminal domain, pathogenicity island component PFY08_00525 PF17871 AAA lid domain PFY08_00525 PF07724 AAA domain (Cdc48 subfamily) PFY08_00530 PF18073 Rubredoxin metal binding domain PFY08_00535 PF02457 DisA bacterial checkpoint controller nucleotide-binding PFY08_00535 PF10635 DisA bacterial checkpoint controller linker region PFY08_00545 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase PFY08_00550 PF02542 YgbB family PFY08_00555 PF00749 tRNA synthetases class I (E and Q), catalytic domain PFY08_00560 PF06426 Serine acetyltransferase, N-terminal PFY08_00560 PF00132 Bacterial transferase hexapeptide (six repeats) PFY08_00565 PF09190 DALR domain PFY08_00565 PF01406 tRNA synthetases class I (C) catalytic domain PFY08_00570 PF00636 Ribonuclease III domain PFY08_00575 PF08032 RNA 2'-O ribose methyltransferase substrate binding PFY08_00575 PF00588 SpoU rRNA Methylase family PFY08_00580 PF05991 YacP-like NYN domain PFY08_00585 PF08281 Sigma-70, region 4 PFY08_00585 PF04542 Sigma-70 region 2 PFY08_00590 PF00471 Ribosomal protein L33 PFY08_00595 PF00584 SecE/Sec61-gamma subunits of protein translocation complex PFY08_00600 PF02357 Transcription termination factor nusG PFY08_00600 PF00467 KOW motif PFY08_00605 PF03946 Ribosomal protein L11, N-terminal domain PFY08_00605 PF00298 Ribosomal protein L11, RNA binding domain PFY08_00610 PF00687 Ribosomal protein L1p/L10e family PFY08_00615 PF00466 Ribosomal protein L10 PFY08_00620 PF16320 Ribosomal protein L7/L12 dimerisation domain PFY08_00620 PF00542 Ribosomal protein L7/L12 C-terminal domain PFY08_00625 PF05175 Methyltransferase small domain PFY08_00630 PF00562 RNA polymerase Rpb2, domain 6 PFY08_00630 PF04565 RNA polymerase Rpb2, domain 3 PFY08_00630 PF04561 RNA polymerase Rpb2, domain 2 PFY08_00630 PF04563 RNA polymerase beta subunit PFY08_00630 PF04560 RNA polymerase Rpb2, domain 7 PFY08_00630 PF10385 RNA polymerase beta subunit external 1 domain PFY08_00635 PF04998 RNA polymerase Rpb1, domain 5 PFY08_00635 PF05000 RNA polymerase Rpb1, domain 4 PFY08_00635 PF04983 RNA polymerase Rpb1, domain 3 PFY08_00635 PF00623 RNA polymerase Rpb1, domain 2 PFY08_00635 PF04997 RNA polymerase Rpb1, domain 1 PFY08_00640 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family PFY08_00645 PF00164 Ribosomal protein S12/S23 PFY08_00650 PF00177 Ribosomal protein S7p/S5e PFY08_00655 PF00679 Elongation factor G C-terminus PFY08_00655 PF14492 Elongation Factor G, domain II PFY08_00655 PF00009 Elongation factor Tu GTP binding domain PFY08_00655 PF03144 Elongation factor Tu domain 2 PFY08_00655 PF03764 Elongation factor G, domain IV PFY08_00660 PF00009 Elongation factor Tu GTP binding domain PFY08_00660 PF03144 Elongation factor Tu domain 2 PFY08_00660 PF03143 Elongation factor Tu C-terminal domain PFY08_00665 PF00338 Ribosomal protein S10p/S20e PFY08_00670 PF00297 Ribosomal protein L3 PFY08_00675 PF00573 Ribosomal protein L4/L1 family PFY08_00680 PF00276 Ribosomal protein L23 PFY08_00685 PF00181 Ribosomal Proteins L2, RNA binding domain PFY08_00685 PF03947 Ribosomal Proteins L2, C-terminal domain PFY08_00690 PF00203 Ribosomal protein S19 PFY08_00695 PF00237 Ribosomal protein L22p/L17e PFY08_00700 PF07650 KH domain PFY08_00700 PF00189 Ribosomal protein S3, C-terminal domain PFY08_00705 PF00252 Ribosomal protein L16p/L10e PFY08_00710 PF00831 Ribosomal L29 protein PFY08_00715 PF00366 Ribosomal protein S17 PFY08_00720 PF00238 Ribosomal protein L14p/L23e PFY08_00725 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 PFY08_00725 PF00467 KOW motif PFY08_00730 PF00673 ribosomal L5P family C-terminus PFY08_00730 PF00281 Ribosomal protein L5 PFY08_00735 PF00253 Ribosomal protein S14p/S29e PFY08_00740 PF00410 Ribosomal protein S8 PFY08_00745 PF00347 Ribosomal protein L6 PFY08_00750 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast PFY08_00755 PF03719 Ribosomal protein S5, C-terminal domain PFY08_00755 PF00333 Ribosomal protein S5, N-terminal domain PFY08_00760 PF00327 Ribosomal protein L30p/L7e PFY08_00765 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A PFY08_00770 PF00344 SecY translocase PFY08_00775 PF05191 Adenylate kinase, active site lid PFY08_00780 PF00557 Metallopeptidase family M24 PFY08_00785 PF01176 Translation initiation factor 1A / IF-1 PFY08_00790 PF00444 Ribosomal protein L36 PFY08_00795 PF00416 Ribosomal protein S13/S18 PFY08_00800 PF00411 Ribosomal protein S11 PFY08_00805 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain PFY08_00805 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain PFY08_00805 PF01000 RNA polymerase Rpb3/RpoA insert domain PFY08_00810 PF01196 Ribosomal protein L17 PFY08_00815 PF00005 ABC transporter PFY08_00820 PF00005 ABC transporter PFY08_00825 PF02361 Cobalt transport protein PFY08_00830 PF01416 tRNA pseudouridine synthase PFY08_00835 PF00572 Ribosomal protein L13 PFY08_00840 PF00380 Ribosomal protein S9/S16 PFY08_00850 PF01520 N-acetylmuramoyl-L-alanine amidase PFY08_00855 PF10609 NUBPL iron-transfer P-loop NTPase PFY08_00860 PF17898 Spore germination GerD central core domain PFY08_00865 PF14089 KinB-signalling pathway activation in sporulation PFY08_00870 PF01522 Polysaccharide deacetylase PFY08_00940 PF02595 Glycerate kinase family PFY08_00945 PF00491 Arginase family PFY08_00950 PF02457 DisA bacterial checkpoint controller nucleotide-binding PFY08_00955 PF07949 YbbR-like protein PFY08_00960 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PFY08_00960 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PFY08_00960 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain PFY08_00960 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PFY08_00970 PF01380 SIS domain PFY08_00980 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region PFY08_00980 PF00326 Prolyl oligopeptidase family PFY08_01000 PF00528 Binding-protein-dependent transport system inner membrane component PFY08_01005 PF00005 ABC transporter PFY08_01005 PF09383 NIL domain PFY08_01010 PF03180 NLPA lipoprotein PFY08_01015 PF00107 Zinc-binding dehydrogenase PFY08_01015 PF08240 Alcohol dehydrogenase GroES-like domain PFY08_01025 PF01565 FAD binding domain PFY08_01030 PF07690 Major Facilitator Superfamily PFY08_01040 PF07690 Major Facilitator Superfamily PFY08_01060 PF00528 Binding-protein-dependent transport system inner membrane component PFY08_01065 PF12911 N-terminal TM domain of oligopeptide transport permease C PFY08_01065 PF00528 Binding-protein-dependent transport system inner membrane component PFY08_01070 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PFY08_01070 PF00005 ABC transporter PFY08_01075 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PFY08_01075 PF00005 ABC transporter PFY08_01080 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PFY08_01090 PF12833 Helix-turn-helix domain PFY08_01105 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PFY08_01110 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PFY08_01115 PF00248 Aldo/keto reductase family PFY08_01120 PF14748 Pyrroline-5-carboxylate reductase dimerisation PFY08_01120 PF03807 NADP oxidoreductase coenzyme F420-dependent PFY08_01125 PF04973 Nicotinamide mononucleotide transporter PFY08_01130 PF06800 Sugar transport protein PFY08_01135 PF00528 Binding-protein-dependent transport system inner membrane component PFY08_01145 PF12727 PBP superfamily domain PFY08_01145 PF12728 Helix-turn-helix domain PFY08_01155 PF03466 LysR substrate binding domain PFY08_01155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PFY08_01160 PF00892 EamA-like transporter family PFY08_01165 PF14142 YrzO-like protein PFY08_01175 PF01553 Acyltransferase PFY08_01185 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family PFY08_01185 PF00356 Bacterial regulatory proteins, lacI family PFY08_01195 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) PFY08_01195 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 PFY08_01210 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) PFY08_01235 PF16326 ABC transporter C-terminal domain PFY08_01235 PF12848 ABC transporter PFY08_01235 PF00005 ABC transporter PFY08_01245 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PFY08_01250 PF00528 Binding-protein-dependent transport system inner membrane component PFY08_01255 PF12911 N-terminal TM domain of oligopeptide transport permease C PFY08_01255 PF00528 Binding-protein-dependent transport system inner membrane component PFY08_01260 PF00005 ABC transporter PFY08_01260 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PFY08_01265 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PFY08_01265 PF00005 ABC transporter PFY08_01300 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily PFY08_01305 PF01557 Fumarylacetoacetate (FAA) hydrolase family PFY08_01315 PF13520 Amino acid permease PFY08_01320 PF07690 Major Facilitator Superfamily PFY08_01325 PF01820 D-ala D-ala ligase N-terminus PFY08_01325 PF07478 D-ala D-ala ligase C-terminus PFY08_01330 PF01225 Mur ligase family, catalytic domain PFY08_01330 PF08245 Mur ligase middle domain PFY08_01330 PF02875 Mur ligase family, glutamate ligase domain PFY08_01335 PF00270 DEAD/DEAH box helicase PFY08_01335 PF00271 Helicase conserved C-terminal domain PFY08_01340 PF03851 UV-endonuclease UvdE PFY08_01345 PF01694 Rhomboid family PFY08_01350 PF01648 4'-phosphopantetheinyl transferase superfamily PFY08_01360 PF00842 Alanine racemase, C-terminal domain PFY08_01360 PF01168 Alanine racemase, N-terminal domain PFY08_01365 PF01402 Ribbon-helix-helix protein, copG family PFY08_01370 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system PFY08_01375 PF00575 S1 RNA binding domain PFY08_01375 PF16921 Tex protein YqgF-like domain PFY08_01375 PF09371 Tex-like protein N-terminal domain PFY08_01375 PF17674 HHH domain PFY08_01385 PF17283 SprT-like zinc ribbon domain PFY08_01385 PF10263 SprT-like family PFY08_01475 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE PFY08_01480 PF00814 Glycoprotease family PFY08_01485 PF00583 Acetyltransferase (GNAT) family PFY08_01490 PF00814 Glycoprotease family PFY08_01495 PF12848 ABC transporter PFY08_01495 PF00005 ABC transporter PFY08_01495 PF16326 ABC transporter C-terminal domain PFY08_01500 PF06971 Putative DNA-binding protein N-terminus PFY08_01500 PF02629 CoA binding domain PFY08_01510 PF02517 CPBP intramembrane metalloprotease PFY08_01515 PF00166 Chaperonin 10 Kd subunit PFY08_01520 PF00118 TCP-1/cpn60 chaperonin family PFY08_01525 PF00117 Glutamine amidotransferase class-I PFY08_01525 PF00958 GMP synthase C terminal domain PFY08_01525 PF02540 NAD synthase PFY08_01530 PF00860 Permease family PFY08_01535 PF00486 Transcriptional regulatory protein, C terminal PFY08_01535 PF00072 Response regulator receiver domain PFY08_01540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PFY08_01540 PF00512 His Kinase A (phospho-acceptor) domain PFY08_01540 PF00989 PAS fold PFY08_01540 PF16736 Single Cache-like PFY08_01565 PF01323 DSBA-like thioredoxin domain PFY08_01590 PF02673 Bacitracin resistance protein BacA PFY08_01600 PF00005 ABC transporter PFY08_01605 PF00512 His Kinase A (phospho-acceptor) domain PFY08_01605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PFY08_01610 PF00486 Transcriptional regulatory protein, C terminal PFY08_01610 PF00072 Response regulator receiver domain PFY08_01630 PF14307 Glycosyltransferase WbsX PFY08_01630 PF05045 Rhamnan synthesis protein F PFY08_01640 PF08241 Methyltransferase domain PFY08_01650 PF16363 GDP-mannose 4,6 dehydratase PFY08_01660 PF00535 Glycosyl transferase family 2 PFY08_01680 PF00892 EamA-like transporter family PFY08_01710 PF00731 AIR carboxylase PFY08_01715 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain PFY08_01715 PF02222 ATP-grasp domain PFY08_01720 PF10397 Adenylosuccinate lyase C-terminus PFY08_01720 PF00206 Lyase PFY08_01725 PF01259 SAICAR synthetase PFY08_01730 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase PFY08_01740 PF02769 AIR synthase related protein, C-terminal domain PFY08_01740 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain PFY08_01740 PF00586 AIR synthase related protein, N-terminal domain PFY08_01745 PF00156 Phosphoribosyl transferase domain PFY08_01750 PF00586 AIR synthase related protein, N-terminal domain PFY08_01750 PF02769 AIR synthase related protein, C-terminal domain PFY08_01755 PF00551 Formyl transferase PFY08_01760 PF02142 MGS-like domain PFY08_01760 PF01808 AICARFT/IMPCHase bienzyme PFY08_01765 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain PFY08_01765 PF02844 Phosphoribosylglycinamide synthetase, N domain PFY08_01765 PF02843 Phosphoribosylglycinamide synthetase, C domain PFY08_01785 PF01884 PcrB family PFY08_01790 PF13361 UvrD-like helicase C-terminal domain PFY08_01790 PF00580 UvrD/REP helicase N-terminal domain PFY08_01795 PF01653 NAD-dependent DNA ligase adenylation domain PFY08_01795 PF03119 NAD-dependent DNA ligase C4 zinc finger domain PFY08_01795 PF12826 Helix-hairpin-helix motif PFY08_01795 PF03120 NAD-dependent DNA ligase OB-fold domain PFY08_01795 PF00533 BRCA1 C Terminus (BRCT) domain PFY08_01800 PF07537 CamS sex pheromone cAM373 precursor PFY08_01805 PF01925 Sulfite exporter TauE/SafE PFY08_01810 PF00171 Aldehyde dehydrogenase family PFY08_01815 PF00857 Isochorismatase family PFY08_01820 PF00005 ABC transporter PFY08_01820 PF09383 NIL domain PFY08_01825 PF00528 Binding-protein-dependent transport system inner membrane component PFY08_01830 PF03180 NLPA lipoprotein PFY08_01845 PF02374 Anion-transporting ATPase PFY08_01845 PF17886 HSP20-like domain found in ArsA PFY08_01850 PF01047 MarR family PFY08_01855 PF05360 yiaA/B two helix domain PFY08_01860 PF02686 Glu-tRNAGln amidotransferase C subunit PFY08_01865 PF01425 Amidase PFY08_01870 PF02934 GatB/GatE catalytic domain PFY08_01870 PF02637 GatB domain PFY08_01875 PF00781 Diacylglycerol kinase catalytic domain PFY08_01880 PF13419 Haloacid dehalogenase-like hydrolase PFY08_01885 PF00202 Aminotransferase class-III PFY08_01890 PF00158 Sigma-54 interaction domain PFY08_01895 PF00171 Aldehyde dehydrogenase family PFY08_01900 PF00893 Small Multidrug Resistance protein PFY08_01910 PF02073 Thermophilic metalloprotease (M29) PFY08_01930 PF01773 Na+ dependent nucleoside transporter N-terminus PFY08_01930 PF07662 Na+ dependent nucleoside transporter C-terminus PFY08_01930 PF07670 Nucleoside recognition PFY08_01935 PF01938 TRAM domain PFY08_01935 PF13847 Methyltransferase domain PFY08_01935 PF05958 tRNA (Uracil-5-)-methyltransferase PFY08_01940 PF01207 Dihydrouridine synthase (Dus) PFY08_01945 PF07308 Protein of unknown function (DUF1456) PFY08_01960 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain PFY08_01960 PF13378 Enolase C-terminal domain-like PFY08_01970 PF03553 Na+/H+ antiporter family PFY08_01975 PF07687 Peptidase dimerisation domain PFY08_01975 PF01546 Peptidase family M20/M25/M40 PFY08_01985 PF13192 Thioredoxin domain PFY08_01985 PF07992 Pyridine nucleotide-disulphide oxidoreductase PFY08_01990 PF00578 AhpC/TSA family PFY08_01995 PF01636 Phosphotransferase enzyme family PFY08_02000 PF01008 Initiation factor 2 subunit family PFY08_02005 PF00596 Class II Aldolase and Adducin N-terminal domain PFY08_02010 PF01032 FecCD transport family PFY08_02015 PF01032 FecCD transport family PFY08_02020 PF01497 Periplasmic binding protein PFY08_02025 PF07992 Pyridine nucleotide-disulphide oxidoreductase PFY08_02035 PF12728 Helix-turn-helix domain PFY08_02060 PF00989 PAS fold PFY08_02060 PF00512 His Kinase A (phospho-acceptor) domain PFY08_02060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PFY08_02060 PF13426 PAS domain PFY08_02060 PF13188 PAS domain PFY08_02080 PF10127 RNA repair pathway DNA polymerase beta family PFY08_02085 PF07690 Major Facilitator Superfamily PFY08_02090 PF01266 FAD dependent oxidoreductase PFY08_02090 PF00355 Rieske [2Fe-2S] domain PFY08_02100 PF00528 Binding-protein-dependent transport system inner membrane component PFY08_02105 PF00497 Bacterial extracellular solute-binding proteins, family 3 PFY08_02110 PF00005 ABC transporter PFY08_02115 PF02743 Cache domain PFY08_02115 PF00672 HAMP domain PFY08_02115 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PFY08_02120 PF02863 Arginine repressor, C-terminal domain PFY08_02120 PF01316 Arginine repressor, DNA binding domain PFY08_02130 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain PFY08_02130 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain PFY08_02135 PF13520 Amino acid permease PFY08_02140 PF00696 Amino acid kinase family PFY08_02145 PF13545 Crp-like helix-turn-helix domain PFY08_02145 PF00027 Cyclic nucleotide-binding domain PFY08_02155 PF01565 FAD binding domain PFY08_02155 PF08031 Berberine and berberine like PFY08_02160 PF00128 Alpha amylase, catalytic domain PFY08_02160 PF16657 Maltogenic Amylase, C-terminal domain PFY08_02165 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 PFY08_02165 PF00367 phosphotransferase system, EIIB PFY08_02165 PF02378 Phosphotransferase system, EIIC PFY08_02170 PF03372 Endonuclease/Exonuclease/phosphatase family PFY08_02175 PF01061 ABC-2 type transporter PFY08_02180 PF01131 DNA topoisomerase PFY08_02180 PF01751 Toprim domain PFY08_02185 PF02110 Hydroxyethylthiazole kinase family PFY08_02190 PF02581 Thiamine monophosphate synthase PFY08_02195 PF03605 Anaerobic c4-dicarboxylate membrane transporter PFY08_02200 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PFY08_02200 PF00672 HAMP domain PFY08_02205 PF00550 Phosphopantetheine attachment site PFY08_02205 PF00668 Condensation domain PFY08_02205 PF13193 AMP-binding enzyme C-terminal domain PFY08_02205 PF00975 Thioesterase domain PFY08_02205 PF00501 AMP-binding enzyme PFY08_02210 PF01910 Thiamine-binding protein PFY08_02215 PF00528 Binding-protein-dependent transport system inner membrane component PFY08_02225 PF00005 ABC transporter PFY08_02235 PF00704 Glycosyl hydrolases family 18 PFY08_02235 PF00041 Fibronectin type III domain PFY08_02260 PF08360 QacR-like protein, C-terminal region PFY08_02260 PF00440 Bacterial regulatory proteins, tetR family PFY08_02275 PF11700 Vacuole effluxer Atg22 like PFY08_02290 PF03129 Anticodon binding domain PFY08_02290 PF09180 Prolyl-tRNA synthetase, C-terminal PFY08_02290 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) PFY08_02300 PF00480 ROK family PFY08_02305 PF02342 TerD domain PFY08_02310 PF02342 TerD domain PFY08_02315 PF02342 TerD domain PFY08_02320 PF03741 Integral membrane protein TerC family PFY08_02325 PF14266 Putative component of 'biosynthetic module' PFY08_02330 PF05816 Toxic anion resistance protein (TelA) PFY08_02335 PF00689 Cation transporting ATPase, C-terminus PFY08_02335 PF00690 Cation transporter/ATPase, N-terminus PFY08_02340 PF06569 Protein of unknown function (DUF1128) PFY08_02345 PF01451 Low molecular weight phosphotyrosine protein phosphatase PFY08_02355 PF03631 Virulence factor BrkB PFY08_02365 PF00892 EamA-like transporter family PFY08_02375 PF10502 Signal peptidase, peptidase S26 PFY08_02385 PF09335 SNARE associated Golgi protein PFY08_02400 PF16242 Pyridoxamine 5'-phosphate oxidase like PFY08_02405 PF01699 Sodium/calcium exchanger protein PFY08_02410 PF14167 YfkD-like protein PFY08_02415 PF08756 YfkB-like domain PFY08_02415 PF04055 Radical SAM superfamily PFY08_02425 PF05681 Fumarate hydratase (Fumerase) PFY08_02425 PF05683 Fumarase C-terminus PFY08_02430 PF01522 Polysaccharide deacetylase PFY08_02435 PF00730 HhH-GPD superfamily base excision DNA repair protein PFY08_02440 PF01938 TRAM domain PFY08_02440 PF05958 tRNA (Uracil-5-)-methyltransferase PFY08_02450 PF01416 tRNA pseudouridine synthase PFY08_02460 PF13426 PAS domain PFY08_02460 PF02954 Bacterial regulatory protein, Fis family PFY08_02460 PF00158 Sigma-54 interaction domain PFY08_02470 PF00324 Amino acid permease PFY08_02475 PF01546 Peptidase family M20/M25/M40 PFY08_02475 PF07687 Peptidase dimerisation domain PFY08_02500 PF04960 Glutaminase PFY08_02505 PF00367 phosphotransferase system, EIIB PFY08_02505 PF02378 Phosphotransferase system, EIIC PFY08_02510 PF00144 Beta-lactamase PFY08_02525 PF00535 Glycosyl transferase family 2 PFY08_02530 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain PFY08_02530 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain PFY08_02530 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain PFY08_02535 PF02911 Formyl transferase, C-terminal domain PFY08_02535 PF00551 Formyl transferase PFY08_02535 PF01370 NAD dependent epimerase/dehydratase family PFY08_02540 PF00535 Glycosyl transferase family 2 PFY08_02550 PF01228 Glycine radical PFY08_02550 PF02901 Pyruvate formate lyase-like PFY08_02555 PF04055 Radical SAM superfamily PFY08_02560 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase PFY08_02560 PF04101 Glycosyltransferase family 28 C-terminal domain PFY08_02575 PF01979 Amidohydrolase family PFY08_02580 PF01370 NAD dependent epimerase/dehydratase family PFY08_02580 PF08338 Domain of unknown function (DUF1731) PFY08_02585 PF02631 RecX family PFY08_02600 PF08176 Small acid-soluble spore protein K family PFY08_02605 PF14043 WVELL protein PFY08_02610 PF04307 LexA-binding, inner membrane-associated putative hydrolase PFY08_02615 PF00730 HhH-GPD superfamily base excision DNA repair protein PFY08_02615 PF14815 NUDIX domain PFY08_02625 PF04259 Small, acid-soluble spore protein, gamma-type PFY08_02630 PF14182 YgaB-like protein PFY08_02635 PF04167 Protein of unknown function (DUF402) PFY08_02640 PF00664 ABC transporter transmembrane region PFY08_02640 PF00005 ABC transporter PFY08_02645 PF06081 Aromatic acid exporter family member 1 PFY08_02650 PF04898 Glutamate synthase central domain PFY08_02650 PF01645 Conserved region in glutamate synthase PFY08_02650 PF01493 GXGXG motif PFY08_02650 PF00310 Glutamine amidotransferases class-II PFY08_02655 PF00202 Aminotransferase class-III PFY08_02660 PF00005 ABC transporter PFY08_02675 PF07885 Ion channel PFY08_02680 PF00578 AhpC/TSA family PFY08_02685 PF01475 Ferric uptake regulator family PFY08_02695 PF11023 Zinc-ribbon containing domain PFY08_02795 PF01709 Transcriptional regulator PFY08_02800 PF13344 Haloacid dehalogenase-like hydrolase PFY08_02800 PF00293 NUDIX domain PFY08_02805 PF00912 Transglycosylase PFY08_02805 PF00905 Penicillin binding protein transpeptidase domain PFY08_02810 PF13462 Thioredoxin PFY08_02820 PF08331 Domain of unknown function (DUF1730) PFY08_02825 PF12671 Putative amidase domain PFY08_02830 PF00588 SpoU rRNA Methylase family PFY08_02835 PF00990 Diguanylate cyclase, GGDEF domain PFY08_02835 PF00563 EAL domain PFY08_02835 PF00498 FHA domain PFY08_02840 PF08298 PrkA AAA domain PFY08_02840 PF06798 PrkA serine protein kinase C-terminal domain PFY08_02845 PF04285 Protein of unknown function (DUF444) PFY08_02860 PF02028 BCCT, betaine/carnitine/choline family transporter PFY08_02865 PF08453 Peptidase family M9 N-terminal PFY08_02865 PF01752 Collagenase PFY08_02865 PF18496 Collagenase G catalytic helper subdomain PFY08_02875 PF15975 Flotillin PFY08_02875 PF01145 SPFH domain / Band 7 family PFY08_02880 PF02743 Cache domain PFY08_02880 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PFY08_02880 PF00672 HAMP domain PFY08_02885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PFY08_02885 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain PFY08_02885 PF17203 Single cache domain 3 PFY08_02885 PF00989 PAS fold PFY08_02890 PF00072 Response regulator receiver domain PFY08_02890 PF12431 Transcriptional regulator PFY08_02895 PF03600 Citrate transporter PFY08_02920 PF04309 Glycerol-3-phosphate responsive antiterminator PFY08_02925 PF00005 ABC transporter PFY08_02925 PF17912 MalK OB fold domain PFY08_02930 PF00528 Binding-protein-dependent transport system inner membrane component PFY08_02935 PF00528 Binding-protein-dependent transport system inner membrane component PFY08_02940 PF13416 Bacterial extracellular solute-binding protein PFY08_02945 PF00149 Calcineurin-like phosphoesterase PFY08_02950 PF00486 Transcriptional regulatory protein, C terminal PFY08_02950 PF00072 Response regulator receiver domain PFY08_02955 PF00512 His Kinase A (phospho-acceptor) domain PFY08_02955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PFY08_02965 PF13529 Peptidase_C39 like family PFY08_02970 PF02743 Cache domain PFY08_02970 PF00672 HAMP domain PFY08_02970 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PFY08_02975 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain PFY08_02975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PFY08_02975 PF17203 Single cache domain 3 PFY08_02975 PF00989 PAS fold PFY08_02980 PF00072 Response regulator receiver domain PFY08_02985 PF03390 2-hydroxycarboxylate transporter family PFY08_02990 PF00390 Malic enzyme, N-terminal domain PFY08_02990 PF03949 Malic enzyme, NAD binding domain PFY08_03000 PF00892 EamA-like transporter family PFY08_03005 PF00155 Aminotransferase class I and II PFY08_03005 PF00392 Bacterial regulatory proteins, gntR family PFY08_03015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PFY08_03015 PF18698 Histidine kinase sensor domain PFY08_03015 PF00512 His Kinase A (phospho-acceptor) domain PFY08_03015 PF00989 PAS fold PFY08_03015 PF00672 HAMP domain PFY08_03020 PF00486 Transcriptional regulatory protein, C terminal PFY08_03020 PF00072 Response regulator receiver domain PFY08_03035 PF02634 FdhD/NarQ family PFY08_03040 PF01568 Molydopterin dinucleotide binding domain PFY08_03040 PF00384 Molybdopterin oxidoreductase PFY08_03040 PF04879 Molybdopterin oxidoreductase Fe4S4 domain PFY08_03040 PF00037 4Fe-4S binding domain PFY08_03040 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region PFY08_03045 PF07849 Protein of unknown function (DUF1641) PFY08_03055 PF01262 Alanine dehydrogenase/PNT, C-terminal domain PFY08_03055 PF05222 Alanine dehydrogenase/PNT, N-terminal domain PFY08_03060 PF13520 Amino acid permease PFY08_03070 PF01022 Bacterial regulatory protein, arsR family PFY08_03075 PF00403 Heavy-metal-associated domain PFY08_03080 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family PFY08_03080 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain PFY08_03080 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain PFY08_03115 PF04294 VanW like protein PFY08_03120 PF03816 Cell envelope-related transcriptional attenuator domain PFY08_03125 PF01773 Na+ dependent nucleoside transporter N-terminus PFY08_03125 PF07662 Na+ dependent nucleoside transporter C-terminus PFY08_03130 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily PFY08_03135 PF01595 Cyclin M transmembrane N-terminal domain PFY08_03135 PF03471 Transporter associated domain PFY08_03135 PF00571 CBS domain PFY08_03140 PF00206 Lyase PFY08_03140 PF10415 Fumarase C C-terminus PFY08_03145 PF02652 L-lactate permease PFY08_03150 PF01022 Bacterial regulatory protein, arsR family PFY08_03155 PF08141 Small acid-soluble spore protein H family PFY08_03160 PF00854 POT family PFY08_03165 PF01497 Periplasmic binding protein PFY08_03170 PF01032 FecCD transport family PFY08_03175 PF01032 FecCD transport family PFY08_03180 PF00005 ABC transporter PFY08_03190 PF00155 Aminotransferase class I and II PFY08_03195 PF01370 NAD dependent epimerase/dehydratase family PFY08_03200 PF00293 NUDIX domain PFY08_03200 PF13344 Haloacid dehalogenase-like hydrolase PFY08_03205 PF00092 von Willebrand factor type A domain PFY08_03210 PF07728 AAA domain (dynein-related subfamily) PFY08_03215 PF13091 PLD-like domain PFY08_03215 PF13396 Phospholipase_D-nuclease N-terminal PFY08_03225 PF00563 EAL domain PFY08_03225 PF00990 Diguanylate cyclase, GGDEF domain PFY08_03225 PF03707 Bacterial signalling protein N terminal repeat PFY08_03230 PF13520 Amino acid permease PFY08_03235 PF07702 UTRA domain PFY08_03235 PF00392 Bacterial regulatory proteins, gntR family PFY08_03240 PF02378 Phosphotransferase system, EIIC PFY08_03240 PF00367 phosphotransferase system, EIIB PFY08_03245 PF00128 Alpha amylase, catalytic domain PFY08_03245 PF16657 Maltogenic Amylase, C-terminal domain PFY08_03260 PF03323 Bacillus/Clostridium GerA spore germination protein PFY08_03265 PF07730 Histidine kinase PFY08_03265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PFY08_03265 PF13492 GAF domain PFY08_03270 PF00196 Bacterial regulatory proteins, luxR family PFY08_03270 PF00072 Response regulator receiver domain PFY08_03275 PF02225 PA domain PFY08_03275 PF13860 FlgD Ig-like domain PFY08_03275 PF05922 Peptidase inhibitor I9 PFY08_03275 PF00082 Subtilase family PFY08_03280 PF12389 Camelysin metallo-endopeptidase PFY08_03285 PF01636 Phosphotransferase enzyme family PFY08_03290 PF01235 Sodium:alanine symporter family PFY08_03295 PF00005 ABC transporter PFY08_03300 PF00497 Bacterial extracellular solute-binding proteins, family 3 PFY08_03305 PF00528 Binding-protein-dependent transport system inner membrane component PFY08_03310 PF00528 Binding-protein-dependent transport system inner membrane component PFY08_03315 PF00324 Amino acid permease PFY08_03340 PF08279 HTH domain PFY08_03340 PF13280 WYL domain PFY08_03345 PF01872 RibD C-terminal domain PFY08_03350 PF00672 HAMP domain PFY08_03350 PF00512 His Kinase A (phospho-acceptor) domain PFY08_03350 PF00989 PAS fold PFY08_03350 PF18698 Histidine kinase sensor domain PFY08_03350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PFY08_03355 PF00072 Response regulator receiver domain PFY08_03355 PF00486 Transcriptional regulatory protein, C terminal PFY08_03365 PF01740 STAS domain PFY08_03365 PF00916 Sulfate permease family PFY08_03370 PF00582 Universal stress protein family PFY08_03380 PF07690 Major Facilitator Superfamily PFY08_03385 PF01047 MarR family PFY08_03390 PF07690 Major Facilitator Superfamily PFY08_03395 PF00356 Bacterial regulatory proteins, lacI family PFY08_03400 PF00294 pfkB family carbohydrate kinase PFY08_03405 PF05025 RbsD / FucU transport protein family PFY08_03410 PF00005 ABC transporter PFY08_03415 PF02653 Branched-chain amino acid transport system / permease component PFY08_03420 PF13407 Periplasmic binding protein domain PFY08_03425 PF00923 Transaldolase/Fructose-6-phosphate aldolase PFY08_03430 PF05547 Immune inhibitor A peptidase M6 PFY08_03445 PF08240 Alcohol dehydrogenase GroES-like domain PFY08_03445 PF00107 Zinc-binding dehydrogenase PFY08_03455 PF00882 Zinc dependent phospholipase C PFY08_03460 PF03372 Endonuclease/Exonuclease/phosphatase family PFY08_03490 PF02673 Bacitracin resistance protein BacA PFY08_03495 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PFY08_03495 PF00672 HAMP domain PFY08_03495 PF02743 Cache domain PFY08_03500 PF07501 G5 domain PFY08_03500 PF03990 G5-linked-Ubiquitin-like domain PFY08_03500 PF06725 3D domain PFY08_03505 PF01381 Helix-turn-helix PFY08_03515 PF04203 Sortase domain PFY08_03525 PF00854 POT family PFY08_03530 PF05525 Branched-chain amino acid transport protein PFY08_03545 PF00324 Amino acid permease PFY08_03550 PF00860 Permease family PFY08_03565 PF13673 Acetyltransferase (GNAT) domain PFY08_03575 PF00999 Sodium/hydrogen exchanger family PFY08_03575 PF02254 TrkA-N domain PFY08_03575 PF02080 TrkA-C domain PFY08_03585 PF00510 Cytochrome c oxidase subunit III PFY08_03590 PF00115 Cytochrome C and Quinol oxidase polypeptide I PFY08_03595 PF02790 Cytochrome C oxidase subunit II, transmembrane domain PFY08_03600 PF00324 Amino acid permease PFY08_03605 PF13529 Peptidase_C39 like family PFY08_03610 PF07687 Peptidase dimerisation domain PFY08_03610 PF01546 Peptidase family M20/M25/M40 PFY08_03615 PF11755 Protein of unknown function (DUF3311) PFY08_03620 PF00474 Sodium:solute symporter family PFY08_03625 PF03323 Bacillus/Clostridium GerA spore germination protein PFY08_03630 PF03845 Spore germination protein PFY08_03635 PF05504 Spore germination B3/ GerAC like, C-terminal PFY08_03645 PF02421 Ferrous iron transport protein B PFY08_03645 PF07670 Nucleoside recognition PFY08_03645 PF17910 FeoB cytosolic helical domain PFY08_03645 PF07664 Ferrous iron transport protein B C terminus PFY08_03650 PF17910 FeoB cytosolic helical domain PFY08_03650 PF07664 Ferrous iron transport protein B C terminus PFY08_03650 PF02421 Ferrous iron transport protein B PFY08_03650 PF07670 Nucleoside recognition PFY08_03655 PF07670 Nucleoside recognition PFY08_03655 PF17910 FeoB cytosolic helical domain PFY08_03655 PF07664 Ferrous iron transport protein B C terminus PFY08_03655 PF04023 FeoA domain PFY08_03655 PF02421 Ferrous iron transport protein B PFY08_03660 PF12849 PBP superfamily domain PFY08_03665 PF00528 Binding-protein-dependent transport system inner membrane component PFY08_03670 PF00528 Binding-protein-dependent transport system inner membrane component PFY08_03680 PF00873 AcrB/AcrD/AcrF family PFY08_03800 PF00571 CBS domain PFY08_03815 PF00246 Zinc carboxypeptidase PFY08_03815 PF08239 Bacterial SH3 domain PFY08_03820 PF03070 TENA/THI-4/PQQC family PFY08_03825 PF00005 ABC transporter PFY08_03830 PF00528 Binding-protein-dependent transport system inner membrane component PFY08_03835 PF09084 NMT1/THI5 like PFY08_03840 PF02581 Thiamine monophosphate synthase PFY08_03845 PF01266 FAD dependent oxidoreductase PFY08_03850 PF02597 ThiS family PFY08_03855 PF05690 Thiazole biosynthesis protein ThiG PFY08_03860 PF00899 ThiF family PFY08_03865 PF08543 Phosphomethylpyrimidine kinase PFY08_03890 PF03814 Potassium-transporting ATPase A subunit PFY08_03900 PF02669 K+-transporting ATPase, c chain PFY08_03905 PF02702 Osmosensitive K+ channel His kinase sensor domain PFY08_03910 PF07690 Major Facilitator Superfamily PFY08_03915 PF01047 MarR family PFY08_03940 PF00005 ABC transporter PFY08_03955 PF02653 Branched-chain amino acid transport system / permease component PFY08_03960 PF00005 ABC transporter PFY08_03970 PF00860 Permease family PFY08_03980 PF03734 L,D-transpeptidase catalytic domain PFY08_03980 PF17969 L,D-transpeptidase C-terminal domain PFY08_03990 PF00294 pfkB family carbohydrate kinase PFY08_03995 PF08244 Glycosyl hydrolases family 32 C terminal PFY08_03995 PF00251 Glycosyl hydrolases family 32 N-terminal domain PFY08_04000 PF00367 phosphotransferase system, EIIB PFY08_04000 PF02378 Phosphotransferase system, EIIC PFY08_04005 PF00356 Bacterial regulatory proteins, lacI family PFY08_04005 PF13407 Periplasmic binding protein domain PFY08_04015 PF00085 Thioredoxin PFY08_04020 PF02600 Disulfide bond formation protein DsbB PFY08_04025 PF14148 YhdB-like protein PFY08_04035 PF03845 Spore germination protein PFY08_04045 PF03323 Bacillus/Clostridium GerA spore germination protein PFY08_04055 PF00881 Nitroreductase family PFY08_04060 PF04293 SpoVR like protein PFY08_04070 PF01614 Bacterial transcriptional regulator PFY08_04070 PF09339 IclR helix-turn-helix domain PFY08_04085 PF07992 Pyridine nucleotide-disulphide oxidoreductase PFY08_04085 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain PFY08_04090 PF02583 Metal-sensitive transcriptional repressor PFY08_04095 PF00581 Rhodanese-like domain PFY08_04095 PF01206 Sulfurtransferase TusA PFY08_04100 PF00753 Metallo-beta-lactamase superfamily PFY08_04100 PF00581 Rhodanese-like domain PFY08_04105 PF01206 Sulfurtransferase TusA PFY08_04110 PF00581 Rhodanese-like domain PFY08_04110 PF01206 Sulfurtransferase TusA PFY08_04115 PF00581 Rhodanese-like domain PFY08_04120 PF13686 DsrE/DsrF/DrsH-like family PFY08_04125 PF01925 Sulfite exporter TauE/SafE PFY08_04135 PF03816 Cell envelope-related transcriptional attenuator domain PFY08_04140 PF00107 Zinc-binding dehydrogenase PFY08_04140 PF08240 Alcohol dehydrogenase GroES-like domain PFY08_04145 PF02690 Na+/Pi-cotransporter PFY08_04150 PF07690 Major Facilitator Superfamily PFY08_04160 PF08279 HTH domain PFY08_04160 PF05043 Mga helix-turn-helix domain PFY08_04160 PF00874 PRD domain PFY08_04160 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 PFY08_04165 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit PFY08_04170 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit PFY08_04175 PF02378 Phosphotransferase system, EIIC PFY08_04190 PF01476 LysM domain PFY08_04190 PF06725 3D domain PFY08_04195 PF02687 FtsX-like permease family PFY08_04195 PF12704 MacB-like periplasmic core domain PFY08_04200 PF00005 ABC transporter PFY08_04210 PF09529 Integral membrane protein (intg_mem_TP0381) PFY08_04225 PF05525 Branched-chain amino acid transport protein PFY08_04230 PF05067 Manganese containing catalase PFY08_04235 PF12652 CotJB protein PFY08_04240 PF11007 Spore coat associated protein JA (CotJA) PFY08_04255 PF02735 Ku70/Ku80 beta-barrel domain PFY08_04265 PF09335 SNARE associated Golgi protein PFY08_04300 PF13520 Amino acid permease PFY08_04305 PF00999 Sodium/hydrogen exchanger family PFY08_04315 PF01418 Helix-turn-helix domain, rpiR family PFY08_04315 PF01380 SIS domain PFY08_04320 PF13580 SIS domain PFY08_04325 PF00367 phosphotransferase system, EIIB PFY08_04325 PF02378 Phosphotransferase system, EIIC PFY08_04335 PF07681 DoxX PFY08_04350 PF00892 EamA-like transporter family PFY08_04355 PF01037 Lrp/AsnC ligand binding domain PFY08_04360 PF00583 Acetyltransferase (GNAT) family PFY08_04360 PF14698 Argininosuccinate lyase C-terminal PFY08_04360 PF00206 Lyase PFY08_04370 PF13411 MerR HTH family regulatory protein PFY08_04375 PF00893 Small Multidrug Resistance protein PFY08_04385 PF17934 Tetracyclin repressor-like, C-terminal domain PFY08_04385 PF00440 Bacterial regulatory proteins, tetR family PFY08_04390 PF07690 Major Facilitator Superfamily PFY08_04395 PF01638 HxlR-like helix-turn-helix PFY08_04405 PF02525 Flavodoxin-like fold PFY08_04410 PF00005 ABC transporter PFY08_04435 PF01965 DJ-1/PfpI family PFY08_04440 PF00199 Catalase PFY08_04440 PF06628 Catalase-related immune-responsive PFY08_04440 PF18011 C-terminal domain found in long catalases PFY08_04450 PF13520 Amino acid permease PFY08_04455 PF01177 Asp/Glu/Hydantoin racemase PFY08_04465 PF00171 Aldehyde dehydrogenase family PFY08_04470 PF00664 ABC transporter transmembrane region PFY08_04470 PF00005 ABC transporter PFY08_04475 PF00664 ABC transporter transmembrane region PFY08_04475 PF00005 ABC transporter PFY08_04480 PF00497 Bacterial extracellular solute-binding proteins, family 3 PFY08_04485 PF00528 Binding-protein-dependent transport system inner membrane component PFY08_04490 PF00005 ABC transporter PFY08_04495 PF00269 Small, acid-soluble spore proteins, alpha/beta type PFY08_04505 PF14398 YheC/D like ATP-grasp PFY08_04515 PF04286 Protein of unknown function (DUF445) PFY08_04520 PF06133 Control of competence regulator ComK, YlbF/YmcA PFY08_04535 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain PFY08_04535 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PFY08_04535 PF00205 Thiamine pyrophosphate enzyme, central domain PFY08_04540 PF03306 Alpha-acetolactate decarboxylase PFY08_04545 PF02245 Methylpurine-DNA glycosylase (MPG) PFY08_04555 PF17961 Bacterial Ig domain PFY08_04555 PF00746 LPXTG cell wall anchor motif PFY08_04555 PF17210 SdrD B-like domain PFY08_04555 PF10425 C-terminus of bacterial fibrinogen-binding adhesin PFY08_04555 PF04650 YSIRK type signal peptide PFY08_04560 PF01510 N-acetylmuramoyl-L-alanine amidase PFY08_04560 PF01471 Putative peptidoglycan binding domain PFY08_04565 PF04055 Radical SAM superfamily PFY08_04570 PF00501 AMP-binding enzyme PFY08_04570 PF13193 AMP-binding enzyme C-terminal domain PFY08_04585 PF01740 STAS domain PFY08_04585 PF00916 Sulfate permease family PFY08_04590 PF01943 Polysaccharide biosynthesis protein PFY08_04590 PF14667 Polysaccharide biosynthesis C-terminal domain PFY08_04610 PF00378 Enoyl-CoA hydratase/isomerase PFY08_04630 PF05343 M42 glutamyl aminopeptidase PFY08_04635 PF01520 N-acetylmuramoyl-L-alanine amidase PFY08_04635 PF00395 S-layer homology domain PFY08_04645 PF11121 Protein of unknown function (DUF2639) PFY08_04650 PF05544 Proline racemase PFY08_04655 PF02423 Ornithine cyclodeaminase/mu-crystallin family PFY08_04660 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PFY08_04665 PF00528 Binding-protein-dependent transport system inner membrane component PFY08_04670 PF12911 N-terminal TM domain of oligopeptide transport permease C PFY08_04670 PF00528 Binding-protein-dependent transport system inner membrane component PFY08_04675 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PFY08_04675 PF00005 ABC transporter PFY08_04680 PF00005 ABC transporter PFY08_04680 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PFY08_04690 PF00753 Metallo-beta-lactamase superfamily PFY08_04690 PF16123 Hydroxyacylglutathione hydrolase C-terminus PFY08_04710 PF02423 Ornithine cyclodeaminase/mu-crystallin family PFY08_04715 PF06013 Proteins of 100 residues with WXG PFY08_04730 PF04740 LXG domain of WXG superfamily PFY08_04730 PF14436 Bacterial EndoU nuclease PFY08_04830 PF00083 Sugar (and other) transporter PFY08_04835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PFY08_04835 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain PFY08_04840 PF12431 Transcriptional regulator PFY08_04840 PF08279 HTH domain PFY08_04840 PF00072 Response regulator receiver domain PFY08_04845 PF03401 Tripartite tricarboxylate transporter family receptor PFY08_04850 PF02342 TerD domain PFY08_04855 PF02976 DNA mismatch repair enzyme MutH PFY08_04860 PF00145 C-5 cytosine-specific DNA methylase PFY08_04870 PF07728 AAA domain (dynein-related subfamily) PFY08_04880 PF13391 HNH endonuclease PFY08_04920 PF06445 GyrI-like small molecule binding domain PFY08_04920 PF13411 MerR HTH family regulatory protein PFY08_04935 PF03796 DnaB-like helicase C terminal domain PFY08_04935 PF00772 DnaB-like helicase N terminal domain PFY08_04950 PF01925 Sulfite exporter TauE/SafE PFY08_04965 PF07690 Major Facilitator Superfamily PFY08_04985 PF09680 Family of unknown function PFY08_04990 PF13302 Acetyltransferase (GNAT) domain PFY08_05015 PF12146 Serine aminopeptidase, S33 PFY08_05015 PF13026 Protein of unknown function (DUF3887) PFY08_05055 PF01066 CDP-alcohol phosphatidyltransferase PFY08_05070 PF02733 Dak1 domain PFY08_05080 PF02733 Dak1 domain PFY08_05110 PF00395 S-layer homology domain PFY08_05145 PF11181 Heat induced stress protein YflT PFY08_05150 PF05532 CsbD-like PFY08_05165 PF01740 STAS domain PFY08_05170 PF13581 Histidine kinase-like ATPase domain PFY08_05175 PF04539 Sigma-70 region 3 PFY08_05175 PF04545 Sigma-70, region 4 PFY08_05175 PF04542 Sigma-70 region 2 PFY08_05185 PF07228 Stage II sporulation protein E (SpoIIE) PFY08_05185 PF13426 PAS domain PFY08_05190 PF03705 CheR methyltransferase, all-alpha domain PFY08_05190 PF01739 CheR methyltransferase, SAM binding domain PFY08_05195 PF00512 His Kinase A (phospho-acceptor) domain PFY08_05195 PF01627 Hpt domain PFY08_05195 PF00072 Response regulator receiver domain PFY08_05195 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) PFY08_05195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PFY08_05195 PF00672 HAMP domain PFY08_05220 PF01906 Putative heavy-metal-binding PFY08_05230 PF08240 Alcohol dehydrogenase GroES-like domain PFY08_05230 PF00107 Zinc-binding dehydrogenase PFY08_05235 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family PFY08_05240 PF11121 Protein of unknown function (DUF2639) PFY08_05255 PF00149 Calcineurin-like phosphoesterase PFY08_05260 PF13514 AAA domain PFY08_05265 PF01966 HD domain PFY08_05265 PF01336 OB-fold nucleic acid binding domain PFY08_05275 PF01810 LysE type translocator PFY08_05280 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily PFY08_05285 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily PFY08_05290 PF18801 response regulator aspartate phosphatase H, N terminal PFY08_05300 PF00561 alpha/beta hydrolase fold PFY08_05300 PF08386 TAP-like protein PFY08_05305 PF14147 Sporulation protein YhaL PFY08_05325 PF00190 Cupin PFY08_05330 PF01381 Helix-turn-helix PFY08_05335 PF04309 Glycerol-3-phosphate responsive antiterminator PFY08_05340 PF00230 Major intrinsic protein PFY08_05345 PF02782 FGGY family of carbohydrate kinases, C-terminal domain PFY08_05345 PF00370 FGGY family of carbohydrate kinases, N-terminal domain PFY08_05350 PF01266 FAD dependent oxidoreductase PFY08_05350 PF16901 C-terminal domain of alpha-glycerophosphate oxidase PFY08_05355 PF03551 Transcriptional regulator PadR-like family PFY08_05370 PF13538 UvrD-like helicase C-terminal domain PFY08_05395 PF01047 MarR family PFY08_05400 PF12732 YtxH-like protein PFY08_05405 PF01230 HIT domain PFY08_05410 PF00005 ABC transporter PFY08_05415 PF05975 Bacterial ABC transporter protein EcsB PFY08_05420 PF12787 EcsC protein family PFY08_05440 PF03703 Bacterial PH domain PFY08_05445 PF03703 Bacterial PH domain PFY08_05470 PF10014 2OG-Fe dioxygenase PFY08_05480 PF00892 EamA-like transporter family PFY08_05485 PF03703 Bacterial PH domain PFY08_05495 PF03992 Antibiotic biosynthesis monooxygenase PFY08_05500 PF00912 Transglycosylase PFY08_05500 PF00905 Penicillin binding protein transpeptidase domain PFY08_05505 PF01208 Uroporphyrinogen decarboxylase (URO-D) PFY08_05515 PF01593 Flavin containing amine oxidoreductase PFY08_05540 PF03965 Penicillinase repressor PFY08_05550 PF17932 Tetracyclin repressor-like, C-terminal domain PFY08_05550 PF00440 Bacterial regulatory proteins, tetR family PFY08_05570 PF13302 Acetyltransferase (GNAT) domain PFY08_05580 PF14149 YhfH-like protein PFY08_05585 PF12706 Beta-lactamase superfamily domain PFY08_05590 PF03099 Biotin/lipoate A/B protein ligase family PFY08_05590 PF10437 Bacterial lipoate protein ligase C-terminus PFY08_05600 PF00501 AMP-binding enzyme PFY08_05600 PF13193 AMP-binding enzyme C-terminal domain PFY08_05605 PF00395 S-layer homology domain PFY08_05605 PF01520 N-acetylmuramoyl-L-alanine amidase PFY08_05615 PF00528 Binding-protein-dependent transport system inner membrane component PFY08_05620 PF00528 Binding-protein-dependent transport system inner membrane component PFY08_05625 PF12857 TOBE-like domain PFY08_05625 PF17850 CysA C-terminal regulatory domain PFY08_05625 PF00005 ABC transporter PFY08_05630 PF07968 Leukocidin/Hemolysin toxin family PFY08_05640 PF00149 Calcineurin-like phosphoesterase PFY08_05645 PF01966 HD domain PFY08_05655 PF04542 Sigma-70 region 2 PFY08_05655 PF08281 Sigma-70, region 4 PFY08_05660 PF12833 Helix-turn-helix domain PFY08_05660 PF06445 GyrI-like small molecule binding domain PFY08_05670 PF00512 His Kinase A (phospho-acceptor) domain PFY08_05670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PFY08_05675 PF00072 Response regulator receiver domain PFY08_05675 PF00486 Transcriptional regulatory protein, C terminal PFY08_05695 PF01435 Peptidase family M48 PFY08_05695 PF16491 CAAX prenyl protease N-terminal, five membrane helices PFY08_05700 PF00672 HAMP domain PFY08_05700 PF02743 Cache domain PFY08_05700 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PFY08_05705 PF06452 Carbohydrate family 9 binding domain-like PFY08_05705 PF00395 S-layer homology domain PFY08_05705 PF00331 Glycosyl hydrolase family 10 PFY08_05705 PF02018 Carbohydrate binding domain PFY08_05715 PF01274 Malate synthase PFY08_05720 PF00463 Isocitrate lyase family PFY08_05740 PF00313 'Cold-shock' DNA-binding domain PFY08_05760 PF09335 SNARE associated Golgi protein PFY08_05765 PF10502 Signal peptidase, peptidase S26 PFY08_05770 PF12705 PD-(D/E)XK nuclease superfamily PFY08_05770 PF13361 UvrD-like helicase C-terminal domain PFY08_05775 PF12705 PD-(D/E)XK nuclease superfamily PFY08_05775 PF13361 UvrD-like helicase C-terminal domain PFY08_05775 PF00580 UvrD/REP helicase N-terminal domain PFY08_05785 PF10676 Spore germination protein gerPA/gerPF PFY08_05790 PF10970 Spore germination protein GerPE PFY08_05800 PF10737 Spore germination protein GerPC PFY08_05805 PF10803 Spore germination GerPB PFY08_05810 PF10676 Spore germination protein gerPA/gerPF PFY08_05815 PF09388 Spo0E like sporulation regulatory protein PFY08_05820 PF01557 Fumarylacetoacetate (FAA) hydrolase family PFY08_05830 PF00202 Aminotransferase class-III PFY08_05835 PF07457 Protein of unknown function (DUF1516) PFY08_05845 PF13537 Glutamine amidotransferase domain PFY08_05845 PF00733 Asparagine synthase PFY08_05850 PF00762 Ferrochelatase PFY08_05855 PF06628 Catalase-related immune-responsive PFY08_05855 PF00199 Catalase PFY08_05860 PF00909 Ammonium Transporter Family PFY08_05865 PF00128 Alpha amylase, catalytic domain PFY08_05875 PF04461 Protein of unknown function (DUF520) PFY08_05880 PF17783 CvfB-like winged helix domain PFY08_05880 PF13509 S1 domain PFY08_05895 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 PFY08_05895 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) PFY08_05900 PF12758 Protein of unknown function (DUF3813) PFY08_05915 PF14168 YjzC-like protein PFY08_05920 PF02861 Clp amino terminal domain, pathogenicity island component PFY08_05920 PF07724 AAA domain (Cdc48 subfamily) PFY08_05920 PF17871 AAA lid domain PFY08_05920 PF10431 C-terminal, D2-small domain, of ClpB protein PFY08_05920 PF00004 ATPase family associated with various cellular activities (AAA) PFY08_05940 PF10815 ComZ PFY08_05945 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III PFY08_05945 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal PFY08_05950 PF00109 Beta-ketoacyl synthase, N-terminal domain PFY08_05950 PF02801 Beta-ketoacyl synthase, C-terminal domain PFY08_05955 PF10026 Predicted Zn-dependent protease (DUF2268) PFY08_05960 PF12227 Protein of unknown function (DUF3603) PFY08_05965 PF00579 tRNA synthetases class I (W and Y) PFY08_05975 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PFY08_05980 PF00528 Binding-protein-dependent transport system inner membrane component PFY08_05985 PF00528 Binding-protein-dependent transport system inner membrane component PFY08_05985 PF12911 N-terminal TM domain of oligopeptide transport permease C PFY08_05990 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PFY08_05990 PF00005 ABC transporter PFY08_05995 PF00005 ABC transporter PFY08_05995 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PFY08_06000 PF01554 MatE PFY08_06005 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PFY08_06015 PF03960 ArsC family PFY08_06020 PF03741 Integral membrane protein TerC family PFY08_06025 PF05389 Negative regulator of genetic competence (MecA) PFY08_06030 PF13396 Phospholipase_D-nuclease N-terminal PFY08_06030 PF13091 PLD-like domain PFY08_06040 PF01432 Peptidase family M3 PFY08_06040 PF08439 Oligopeptidase F PFY08_06055 PF01152 Bacterial-like globin PFY08_06060 PF01928 CYTH domain PFY08_06070 PF04607 Region found in RelA / SpoT proteins PFY08_06075 PF01513 ATP-NAD kinase PFY08_06080 PF00849 RNA pseudouridylate synthase PFY08_06090 PF00149 Calcineurin-like phosphoesterase PFY08_06095 PF01098 Cell cycle protein PFY08_06100 PF00535 Glycosyl transferase family 2 PFY08_06105 PF08241 Methyltransferase domain PFY08_06110 PF05711 Macrocin-O-methyltransferase (TylF) PFY08_06120 PF00535 Glycosyl transferase family 2 PFY08_06120 PF13181 Tetratricopeptide repeat PFY08_06140 PF00483 Nucleotidyl transferase PFY08_06145 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase PFY08_06150 PF16363 GDP-mannose 4,6 dehydratase PFY08_06155 PF04321 RmlD substrate binding domain PFY08_06175 PF07098 Protein of unknown function (DUF1360) PFY08_06195 PF00580 UvrD/REP helicase N-terminal domain PFY08_06195 PF13361 UvrD-like helicase C-terminal domain PFY08_06200 PF13673 Acetyltransferase (GNAT) domain PFY08_06210 PF00756 Putative esterase PFY08_06225 PF02368 Bacterial Ig-like domain (group 2) PFY08_06230 PF00474 Sodium:solute symporter family PFY08_06235 PF04715 Anthranilate synthase component I, N terminal region PFY08_06235 PF00425 chorismate binding enzyme PFY08_06240 PF00117 Glutamine amidotransferase class-I PFY08_06240 PF02885 Glycosyl transferase family, helical bundle domain PFY08_06240 PF00591 Glycosyl transferase family, a/b domain PFY08_06245 PF00591 Glycosyl transferase family, a/b domain PFY08_06245 PF02885 Glycosyl transferase family, helical bundle domain PFY08_06250 PF00218 Indole-3-glycerol phosphate synthase PFY08_06255 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase PFY08_06260 PF00291 Pyridoxal-phosphate dependent enzyme PFY08_06265 PF00290 Tryptophan synthase alpha chain PFY08_06275 PF02652 L-lactate permease PFY08_06280 PF10042 Uncharacterized conserved protein (DUF2278) PFY08_06305 PF07992 Pyridine nucleotide-disulphide oxidoreductase PFY08_06305 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain PFY08_06315 PF00881 Nitroreductase family PFY08_06330 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) PFY08_06330 PF02817 e3 binding domain PFY08_06330 PF00364 Biotin-requiring enzyme PFY08_06335 PF16870 2-oxoglutarate dehydrogenase C-terminal PFY08_06335 PF00676 Dehydrogenase E1 component PFY08_06335 PF02779 Transketolase, pyrimidine binding domain PFY08_06340 PF01381 Helix-turn-helix PFY08_06435 PF00239 Resolvase, N terminal domain PFY08_06435 PF02796 Helix-turn-helix domain of resolvase PFY08_06455 PF02899 Phage integrase, N-terminal SAM-like domain PFY08_06455 PF00589 Phage integrase family PFY08_06485 PF07943 Penicillin-binding protein 5, C-terminal domain PFY08_06485 PF00768 D-alanyl-D-alanine carboxypeptidase PFY08_06495 PF12389 Camelysin metallo-endopeptidase PFY08_06505 PF12389 Camelysin metallo-endopeptidase PFY08_06510 PF08671 Anti-repressor SinI PFY08_06510 PF01381 Helix-turn-helix PFY08_06520 PF05547 Immune inhibitor A peptidase M6 PFY08_06530 PF00005 ABC transporter PFY08_06530 PF08402 TOBE domain PFY08_06535 PF00528 Binding-protein-dependent transport system inner membrane component PFY08_06540 PF00528 Binding-protein-dependent transport system inner membrane component PFY08_06545 PF13416 Bacterial extracellular solute-binding protein PFY08_06550 PF01569 PAP2 superfamily PFY08_06555 PF03176 MMPL family PFY08_06565 PF00849 RNA pseudouridylate synthase PFY08_06565 PF01479 S4 domain PFY08_06575 PF00188 Cysteine-rich secretory protein family PFY08_06580 PF13183 4Fe-4S dicluster domain PFY08_06580 PF02754 Cysteine-rich domain PFY08_06585 PF02913 FAD linked oxidases, C-terminal domain PFY08_06585 PF01565 FAD binding domain PFY08_06590 PF05651 Putative sugar diacid recognition PFY08_06590 PF17853 GGDEF-like domain PFY08_06590 PF13556 PucR C-terminal helix-turn-helix domain PFY08_06600 PF00072 Response regulator receiver domain PFY08_06600 PF00486 Transcriptional regulatory protein, C terminal PFY08_06605 PF00989 PAS fold PFY08_06605 PF00512 His Kinase A (phospho-acceptor) domain PFY08_06605 PF18698 Histidine kinase sensor domain PFY08_06605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PFY08_06605 PF00672 HAMP domain PFY08_06610 PF07729 FCD domain PFY08_06610 PF00392 Bacterial regulatory proteins, gntR family PFY08_06615 PF02754 Cysteine-rich domain PFY08_06620 PF11870 Domain of unknown function (DUF3390) PFY08_06620 PF13183 4Fe-4S dicluster domain PFY08_06620 PF02589 LUD domain PFY08_06625 PF02589 LUD domain PFY08_06630 PF01478 Type IV leader peptidase family PFY08_06630 PF06750 Bacterial Peptidase A24 N-terminal domain PFY08_06640 PF01226 Formate/nitrite transporter PFY08_06645 PF03741 Integral membrane protein TerC family PFY08_06650 PF02386 Cation transport protein PFY08_06655 PF00269 Small, acid-soluble spore proteins, alpha/beta type PFY08_06660 PF01575 MaoC like domain PFY08_06685 PF00561 alpha/beta hydrolase fold PFY08_06695 PF02386 Cation transport protein PFY08_06720 PF00528 Binding-protein-dependent transport system inner membrane component PFY08_06725 PF13419 Haloacid dehalogenase-like hydrolase PFY08_06730 PF00266 Aminotransferase class-V PFY08_06740 PF00455 DeoR C terminal sensor domain PFY08_06740 PF08220 DeoR-like helix-turn-helix domain PFY08_06750 PF00596 Class II Aldolase and Adducin N-terminal domain PFY08_06760 PF04748 Divergent polysaccharide deacetylase PFY08_06765 PF09388 Spo0E like sporulation regulatory protein PFY08_06770 PF00512 His Kinase A (phospho-acceptor) domain PFY08_06770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PFY08_06770 PF02743 Cache domain PFY08_06775 PF01047 MarR family PFY08_06785 PF12867 DinB superfamily PFY08_06795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PFY08_06795 PF00512 His Kinase A (phospho-acceptor) domain PFY08_06795 PF00989 PAS fold PFY08_06795 PF13188 PAS domain PFY08_06795 PF13426 PAS domain PFY08_06800 PF06508 Queuosine biosynthesis protein QueC PFY08_06805 PF01242 6-pyruvoyl tetrahydropterin synthase PFY08_06810 PF04055 Radical SAM superfamily PFY08_06815 PF14489 QueF-like protein PFY08_06820 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) PFY08_06850 PF07972 NrdI Flavodoxin like PFY08_06855 PF00317 Ribonucleotide reductase, all-alpha domain PFY08_06855 PF02867 Ribonucleotide reductase, barrel domain PFY08_06855 PF08343 Ribonucleotide reductase N-terminal PFY08_06865 PF13392 HNH endonuclease PFY08_06875 PF00392 Bacterial regulatory proteins, gntR family PFY08_06880 PF00005 ABC transporter PFY08_06890 PF00005 ABC transporter PFY08_06910 PF01037 Lrp/AsnC ligand binding domain PFY08_06920 PF00857 Isochorismatase family PFY08_06930 PF17676 LD-carboxypeptidase C-terminal domain PFY08_06930 PF02016 LD-carboxypeptidase N-terminal domain PFY08_06935 PF03060 Nitronate monooxygenase PFY08_06940 PF04914 DltD protein PFY08_06945 PF00550 Phosphopantetheine attachment site PFY08_06950 PF03062 MBOAT, membrane-bound O-acyltransferase family PFY08_06955 PF13193 AMP-binding enzyme C-terminal domain PFY08_06955 PF00501 AMP-binding enzyme PFY08_06965 PF07687 Peptidase dimerisation domain PFY08_06965 PF01546 Peptidase family M20/M25/M40 PFY08_06975 PF00258 Flavodoxin PFY08_06990 PF01636 Phosphotransferase enzyme family PFY08_07010 PF01554 MatE PFY08_07015 PF02673 Bacitracin resistance protein BacA PFY08_07030 PF01047 MarR family PFY08_07040 PF00375 Sodium:dicarboxylate symporter family PFY08_07045 PF02386 Cation transport protein PFY08_07055 PF09579 Sporulation protein YtfJ (Spore_YtfJ) PFY08_07065 PF03698 Uncharacterised protein family (UPF0180) PFY08_07075 PF01063 Amino-transferase class IV PFY08_07080 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain PFY08_07080 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PFY08_07080 PF00205 Thiamine pyrophosphate enzyme, central domain PFY08_07085 PF01842 ACT domain PFY08_07085 PF10369 Small subunit of acetolactate synthase PFY08_07090 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain PFY08_07090 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain PFY08_07095 PF08502 LeuA allosteric (dimerisation) domain PFY08_07095 PF00682 HMGL-like PFY08_07100 PF00180 Isocitrate/isopropylmalate dehydrogenase PFY08_07105 PF00330 Aconitase family (aconitate hydratase) PFY08_07110 PF00694 Aconitase C-terminal domain PFY08_07115 PF13393 Histidyl-tRNA synthetase PFY08_07120 PF01634 ATP phosphoribosyltransferase PFY08_07125 PF00815 Histidinol dehydrogenase PFY08_07130 PF00475 Imidazoleglycerol-phosphate dehydratase PFY08_07135 PF00117 Glutamine amidotransferase class-I PFY08_07140 PF00977 Histidine biosynthesis protein PFY08_07145 PF00977 Histidine biosynthesis protein PFY08_07150 PF01502 Phosphoribosyl-AMP cyclohydrolase PFY08_07155 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase PFY08_07160 PF02811 PHP domain PFY08_07170 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PFY08_07170 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PFY08_07175 PF01066 CDP-alcohol phosphatidyltransferase PFY08_07180 PF00884 Sulfatase PFY08_07190 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain PFY08_07190 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain PFY08_07200 PF01507 Phosphoadenosine phosphosulfate reductase family PFY08_07205 PF01747 ATP-sulfurylase PFY08_07205 PF14306 PUA-like domain PFY08_07215 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain PFY08_07215 PF01077 Nitrite and sulphite reductase 4Fe-4S domain PFY08_07225 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases PFY08_07230 PF01903 CbiX PFY08_07240 PF00209 Sodium:neurotransmitter symporter family PFY08_07250 PF00375 Sodium:dicarboxylate symporter family PFY08_07260 PF03553 Na+/H+ antiporter family PFY08_07275 PF09922 Cell wall-active antibiotics response 4TMS YvqF PFY08_07280 PF07730 Histidine kinase PFY08_07280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PFY08_07280 PF00672 HAMP domain PFY08_07285 PF00072 Response regulator receiver domain PFY08_07285 PF00196 Bacterial regulatory proteins, luxR family PFY08_07295 PF05525 Branched-chain amino acid transport protein PFY08_07305 PF01209 ubiE/COQ5 methyltransferase family PFY08_07330 PF00175 Oxidoreductase NAD-binding domain PFY08_07330 PF00042 Globin PFY08_07330 PF00970 Oxidoreductase FAD-binding domain PFY08_07345 PF01925 Sulfite exporter TauE/SafE PFY08_07350 PF01384 Phosphate transporter family PFY08_07355 PF01865 Protein of unknown function DUF47 PFY08_07360 PF00905 Penicillin binding protein transpeptidase domain PFY08_07360 PF00912 Transglycosylase PFY08_07375 PF00989 PAS fold PFY08_07375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PFY08_07375 PF00512 His Kinase A (phospho-acceptor) domain PFY08_07380 PF01904 Protein of unknown function DUF72 PFY08_07390 PF00589 Phage integrase family PFY08_07395 PF16736 Single Cache-like PFY08_07395 PF00989 PAS fold PFY08_07395 PF00512 His Kinase A (phospho-acceptor) domain PFY08_07395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PFY08_07400 PF01048 Phosphorylase superfamily PFY08_07410 PF03706 Lysylphosphatidylglycerol synthase TM region PFY08_07410 PF09924 Uncharacterised conserved protein (DUF2156) PFY08_07425 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain PFY08_07425 PF02777 Iron/manganese superoxide dismutases, C-terminal domain PFY08_07430 PF00768 D-alanyl-D-alanine carboxypeptidase PFY08_07430 PF07943 Penicillin-binding protein 5, C-terminal domain PFY08_07435 PF07670 Nucleoside recognition PFY08_07440 PF07670 Nucleoside recognition PFY08_07445 PF00849 RNA pseudouridylate synthase PFY08_07445 PF01479 S4 domain PFY08_07450 PF00578 AhpC/TSA family PFY08_07455 PF05140 ResB-like family PFY08_07460 PF01578 Cytochrome C assembly protein PFY08_07465 PF00486 Transcriptional regulatory protein, C terminal PFY08_07465 PF00072 Response regulator receiver domain PFY08_07470 PF18698 Histidine kinase sensor domain PFY08_07470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PFY08_07470 PF00989 PAS fold PFY08_07470 PF00512 His Kinase A (phospho-acceptor) domain PFY08_07470 PF00672 HAMP domain PFY08_07475 PF01923 Cobalamin adenosyltransferase PFY08_07490 PF12822 ECF transporter, substrate-specific component PFY08_07505 PF00270 DEAD/DEAH box helicase PFY08_07505 PF00271 Helicase conserved C-terminal domain PFY08_07510 PF02517 CPBP intramembrane metalloprotease PFY08_07520 PF00149 Calcineurin-like phosphoesterase PFY08_07525 PF13411 MerR HTH family regulatory protein PFY08_07530 PF05389 Negative regulator of genetic competence (MecA) PFY08_07535 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase PFY08_07535 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain PFY08_07560 PF00710 Asparaginase, N-terminal PFY08_07560 PF17763 Glutaminase/Asparaginase C-terminal domain PFY08_07570 PF02224 Cytidylate kinase PFY08_07575 PF00575 S1 RNA binding domain PFY08_07580 PF01070 FMN-dependent dehydrogenase PFY08_07585 PF14140 YpzI-like protein PFY08_07595 PF14045 YIEGIA protein PFY08_07605 PF01926 50S ribosome-binding GTPase PFY08_07605 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal PFY08_07610 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus PFY08_07610 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus PFY08_07620 PF10966 Protein of unknown function (DUF2768) PFY08_07630 PF09547 Stage IV sporulation protein A (spore_IV_A) PFY08_07635 PF00216 Bacterial DNA-binding protein PFY08_07640 PF01227 GTP cyclohydrolase I PFY08_07645 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 PFY08_07650 PF01209 ubiE/COQ5 methyltransferase family PFY08_07655 PF00348 Polyprenyl synthetase PFY08_07660 PF00334 Nucleoside diphosphate kinase PFY08_07665 PF01264 Chorismate synthase PFY08_07670 PF01761 3-dehydroquinate synthase PFY08_07675 PF00155 Aminotransferase class I and II PFY08_07685 PF08864 UPF0302 domain PFY08_07685 PF08858 IDEAL domain PFY08_07690 PF10673 Protein of unknown function (DUF2487) PFY08_07695 PF00355 Rieske [2Fe-2S] domain PFY08_07700 PF00033 Cytochrome b/b6/petB PFY08_07705 PF00032 Cytochrome b(C-terminal)/b6/petD PFY08_07705 PF13442 Cytochrome C oxidase, cbb3-type, subunit III PFY08_07710 PF07187 Protein of unknown function (DUF1405) PFY08_07720 PF09577 Sporulation protein YpjB (SpoYpjB) PFY08_07725 PF04298 Putative neutral zinc metallopeptidase PFY08_07735 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 PFY08_07735 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) PFY08_07740 PF03819 MazG nucleotide pyrophosphohydrolase domain PFY08_07745 PF01113 Dihydrodipicolinate reductase, N-terminus PFY08_07745 PF05173 Dihydrodipicolinate reductase, C-terminus PFY08_07750 PF02142 MGS-like domain PFY08_07755 PF02585 GlcNAc-PI de-N-acetylase PFY08_07760 PF13439 Glycosyltransferase Family 4 PFY08_07760 PF00534 Glycosyl transferases group 1 PFY08_07765 PF01743 Poly A polymerase head domain PFY08_07765 PF12627 Probable RNA and SrmB- binding site of polymerase A PFY08_07765 PF13735 tRNA nucleotidyltransferase domain 2 putative PFY08_07770 PF02237 Biotin protein ligase C terminal domain PFY08_07770 PF03099 Biotin/lipoate A/B protein ligase family PFY08_07770 PF08279 HTH domain PFY08_07780 PF02548 Ketopantoate hydroxymethyltransferase PFY08_07785 PF02569 Pantoate-beta-alanine ligase PFY08_07790 PF02261 Aspartate decarboxylase PFY08_07795 PF00929 Exonuclease PFY08_07795 PF04851 Type III restriction enzyme, res subunit PFY08_07795 PF13307 Helicase C-terminal domain PFY08_07800 PF14084 Protein of unknown function (DUF4264) PFY08_07810 PF00155 Aminotransferase class I and II PFY08_07815 PF07261 Replication initiation and membrane attachment PFY08_07820 PF00730 HhH-GPD superfamily base excision DNA repair protein PFY08_07820 PF00633 Helix-hairpin-helix motif PFY08_07820 PF10576 Iron-sulfur binding domain of endonuclease III PFY08_07830 PF00912 Transglycosylase PFY08_07830 PF00905 Penicillin binding protein transpeptidase domain PFY08_07835 PF03838 Recombination protein U PFY08_07840 PF10720 Protein of unknown function (DUF2515) PFY08_07870 PF06908 YspA SLOG family PFY08_07875 PF05103 DivIVA protein PFY08_07885 PF02926 THUMP domain PFY08_07885 PF01170 Putative RNA methylase family UPF0020 PFY08_07895 PF13307 Helicase C-terminal domain PFY08_07900 PF02074 Carboxypeptidase Taq (M32) metallopeptidase PFY08_07910 PF00557 Metallopeptidase family M24 PFY08_07915 PF00156 Phosphoribosyl transferase domain PFY08_07920 PF00860 Permease family PFY08_07925 PF04235 Protein of unknown function (DUF418) PFY08_07930 PF00350 Dynamin family PFY08_07940 PF00583 Acetyltransferase (GNAT) family PFY08_07945 PF10752 Protein of unknown function (DUF2533) PFY08_07950 PF00581 Rhodanese-like domain PFY08_07985 PF00690 Cation transporter/ATPase, N-terminus PFY08_07985 PF00689 Cation transporting ATPase, C-terminus PFY08_07990 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain PFY08_07990 PF01367 5'-3' exonuclease, C-terminal SAM fold PFY08_08005 PF02706 Chain length determinant protein PFY08_08005 PF13807 G-rich domain on putative tyrosine kinase PFY08_08015 PF02397 Bacterial sugar transferase PFY08_08030 PF00535 Glycosyl transferase family 2 PFY08_08035 PF00534 Glycosyl transferases group 1 PFY08_08035 PF13439 Glycosyltransferase Family 4 PFY08_08050 PF18014 Acetyltransferase (GNAT) domain PFY08_08050 PF13673 Acetyltransferase (GNAT) domain PFY08_08070 PF13456 Reverse transcriptase-like PFY08_08075 PF01263 Aldose 1-epimerase PFY08_08100 PF00313 'Cold-shock' DNA-binding domain PFY08_08105 PF08892 YqcI/YcgG family PFY08_08110 PF01810 LysE type translocator PFY08_08130 PF00474 Sodium:solute symporter family PFY08_08135 PF00202 Aminotransferase class-III PFY08_08145 PF00999 Sodium/hydrogen exchanger family PFY08_08150 PF00753 Metallo-beta-lactamase superfamily PFY08_08150 PF17770 Ribonuclease J C-terminal domain PFY08_08150 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain PFY08_08155 PF13411 MerR HTH family regulatory protein PFY08_08155 PF06445 GyrI-like small molecule binding domain PFY08_08165 PF04239 Protein of unknown function (DUF421) PFY08_08170 PF02698 DUF218 domain PFY08_08180 PF00881 Nitroreductase family PFY08_08205 PF17209 Hfq protein PFY08_08215 PF01618 MotA/TolQ/ExbB proton channel family PFY08_08220 PF13677 Membrane MotB of proton-channel complex MotA/MotB PFY08_08220 PF00691 OmpA family PFY08_08225 PF00072 Response regulator receiver domain PFY08_08230 PF01584 CheW-like domain PFY08_08230 PF02895 Signal transducing histidine kinase, homodimeric domain PFY08_08230 PF07194 P2 response regulator binding domain PFY08_08230 PF01627 Hpt domain PFY08_08230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PFY08_08235 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term PFY08_08235 PF04509 CheC-like family PFY08_08250 PF01739 CheR methyltransferase, SAM binding domain PFY08_08250 PF03705 CheR methyltransferase, all-alpha domain PFY08_08270 PF06429 Flagellar basal body rod FlgEFG protein C-terminal PFY08_08270 PF00460 Flagella basal body rod protein PFY08_08275 PF00700 Bacterial flagellin C-terminal helical region PFY08_08275 PF00669 Bacterial flagellin N-terminal helical region PFY08_08295 PF00460 Flagella basal body rod protein PFY08_08300 PF00460 Flagella basal body rod protein PFY08_08300 PF06429 Flagellar basal body rod FlgEFG protein C-terminal PFY08_08305 PF02049 Flagellar hook-basal body complex protein FliE PFY08_08310 PF08345 Flagellar M-ring protein C-terminal PFY08_08310 PF01514 Secretory protein of YscJ/FliF family PFY08_08315 PF14842 FliG N-terminal domain PFY08_08315 PF01706 FliG C-terminal domain PFY08_08315 PF14841 FliG middle domain PFY08_08325 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain PFY08_08325 PF02874 ATP synthase alpha/beta family, beta-barrel domain PFY08_08325 PF18269 T3SS EscN ATPase C-terminal domain PFY08_08345 PF07559 Flagellar basal body protein FlaE PFY08_08345 PF00460 Flagella basal body rod protein PFY08_08345 PF06429 Flagellar basal body rod FlgEFG protein C-terminal PFY08_08360 PF01584 CheW-like domain PFY08_08360 PF00072 Response regulator receiver domain PFY08_08365 PF12181 DNA binding domain of the motility gene repressor (MogR) PFY08_08370 PF00669 Bacterial flagellin N-terminal helical region PFY08_08370 PF00700 Bacterial flagellin C-terminal helical region PFY08_08375 PF00700 Bacterial flagellin C-terminal helical region PFY08_08375 PF00669 Bacterial flagellin N-terminal helical region PFY08_08380 PF00700 Bacterial flagellin C-terminal helical region PFY08_08380 PF00669 Bacterial flagellin N-terminal helical region PFY08_08385 PF00700 Bacterial flagellin C-terminal helical region PFY08_08385 PF00669 Bacterial flagellin N-terminal helical region PFY08_08390 PF01464 Transglycosylase SLT domain PFY08_08400 PF02154 Flagellar motor switch protein FliM PFY08_08400 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term PFY08_08405 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term PFY08_08405 PF04509 CheC-like family PFY08_08415 PF00813 FliP family PFY08_08420 PF01313 Bacterial export proteins, family 3 PFY08_08430 PF01312 FlhB HrpN YscU SpaS Family PFY08_08435 PF00771 FHIPEP family PFY08_08440 PF00448 SRP54-type protein, GTPase domain PFY08_08445 PF00460 Flagella basal body rod protein PFY08_08445 PF06429 Flagellar basal body rod FlgEFG protein C-terminal PFY08_08450 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain PFY08_08450 PF02272 DHHA1 domain PFY08_08450 PF01411 tRNA synthetases class II (A) PFY08_08485 PF03992 Antibiotic biosynthesis monooxygenase PFY08_08490 PF08141 Small acid-soluble spore protein H family PFY08_08510 PF03466 LysR substrate binding domain PFY08_08510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PFY08_08515 PF00005 ABC transporter PFY08_08515 PF08402 TOBE domain PFY08_08525 PF00528 Binding-protein-dependent transport system inner membrane component PFY08_08540 PF10787 Uncharacterised protein from bacillus cereus group PFY08_08560 PF00300 Histidine phosphatase superfamily (branch 1) PFY08_08570 PF00561 alpha/beta hydrolase fold PFY08_08580 PF01047 MarR family PFY08_08590 PF00733 Asparagine synthase PFY08_08590 PF13537 Glutamine amidotransferase domain PFY08_08610 PF16916 Dimerisation domain of Zinc Transporter PFY08_08610 PF01545 Cation efflux family PFY08_08620 PF00392 Bacterial regulatory proteins, gntR family PFY08_08620 PF07729 FCD domain PFY08_08625 PF00892 EamA-like transporter family PFY08_08635 PF02492 CobW/HypB/UreG, nucleotide-binding domain PFY08_08635 PF07683 Cobalamin synthesis protein cobW C-terminal domain PFY08_08640 PF03773 Predicted permease PFY08_08655 PF03553 Na+/H+ antiporter family PFY08_08660 PF13411 MerR HTH family regulatory protein PFY08_08670 PF00206 Lyase PFY08_08670 PF10415 Fumarase C C-terminus PFY08_08685 PF01554 MatE PFY08_08690 PF03575 Peptidase family S51 PFY08_08710 PF02683 Cytochrome C biogenesis protein transmembrane region PFY08_08715 PF00578 AhpC/TSA family PFY08_08730 PF00291 Pyridoxal-phosphate dependent enzyme PFY08_08735 PF04286 Protein of unknown function (DUF445) PFY08_08760 PF00072 Response regulator receiver domain PFY08_08760 PF00196 Bacterial regulatory proteins, luxR family PFY08_08765 PF13185 GAF domain PFY08_08765 PF13492 GAF domain PFY08_08765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PFY08_08765 PF07730 Histidine kinase PFY08_08770 PF00005 ABC transporter PFY08_08785 PF13091 PLD-like domain PFY08_08790 PF00696 Amino acid kinase family PFY08_08795 PF00375 Sodium:dicarboxylate symporter family PFY08_08800 PF00206 Lyase PFY08_08800 PF10415 Fumarase C C-terminus PFY08_08805 PF00390 Malic enzyme, N-terminal domain PFY08_08805 PF03949 Malic enzyme, NAD binding domain PFY08_08810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PFY08_08815 PF00072 Response regulator receiver domain PFY08_08815 PF08664 YcbB domain PFY08_08820 PF00271 Helicase conserved C-terminal domain PFY08_08820 PF04434 SWIM zinc finger PFY08_08820 PF00176 SNF2 family N-terminal domain PFY08_08830 PF03590 Aspartate-ammonia ligase PFY08_08840 PF13840 ACT domain PFY08_08840 PF00696 Amino acid kinase family PFY08_08855 PF14158 YndJ-like protein PFY08_08860 PF00293 NUDIX domain PFY08_08860 PF09297 NADH pyrophosphatase zinc ribbon domain PFY08_08865 PF07690 Major Facilitator Superfamily PFY08_08880 PF03976 Polyphosphate kinase 2 (PPK2) PFY08_08885 PF10400 Virulence activator alpha C-term PFY08_08885 PF03551 Transcriptional regulator PadR-like family PFY08_08890 PF07690 Major Facilitator Superfamily PFY08_08900 PF07690 Major Facilitator Superfamily PFY08_08905 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III PFY08_08905 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal PFY08_08910 PF16360 GTP-binding GTPase Middle Region PFY08_08910 PF01926 50S ribosome-binding GTPase PFY08_08910 PF13167 GTP-binding GTPase N-terminal PFY08_08915 PF07690 Major Facilitator Superfamily PFY08_08920 PF00291 Pyridoxal-phosphate dependent enzyme PFY08_08940 PF00209 Sodium:neurotransmitter symporter family PFY08_08945 PF01522 Polysaccharide deacetylase PFY08_08945 PF00457 Glycosyl hydrolases family 11 PFY08_08945 PF03422 Carbohydrate binding module (family 6) PFY08_08955 PF04239 Protein of unknown function (DUF421) PFY08_08975 PF01625 Peptide methionine sulfoxide reductase PFY08_08985 PF01063 Amino-transferase class IV PFY08_08990 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain PFY08_08990 PF00205 Thiamine pyrophosphate enzyme, central domain PFY08_08990 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PFY08_09000 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain PFY08_09000 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain PFY08_09005 PF00920 Dehydratase family PFY08_09010 PF00291 Pyridoxal-phosphate dependent enzyme PFY08_09010 PF00585 C-terminal regulatory domain of Threonine dehydratase PFY08_09020 PF09587 Bacterial capsule synthesis protein PGA_cap PFY08_09035 PF07690 Major Facilitator Superfamily PFY08_09040 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase PFY08_09050 PF00072 Response regulator receiver domain PFY08_09050 PF04397 LytTr DNA-binding domain PFY08_09055 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain PFY08_09055 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain PFY08_09060 PF13673 Acetyltransferase (GNAT) domain PFY08_09070 PF01979 Amidohydrolase family PFY08_09075 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PFY08_09080 PF13302 Acetyltransferase (GNAT) domain PFY08_09085 PF00072 Response regulator receiver domain PFY08_09085 PF00486 Transcriptional regulatory protein, C terminal PFY08_09090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PFY08_09090 PF00512 His Kinase A (phospho-acceptor) domain PFY08_09100 PF01566 Natural resistance-associated macrophage protein PFY08_09105 PF00581 Rhodanese-like domain PFY08_09105 PF12368 Rhodanase C-terminal PFY08_09105 PF17773 UPF0176 acylphosphatase like domain PFY08_09115 PF08546 Ketopantoate reductase PanE/ApbA C terminal PFY08_09115 PF02558 Ketopantoate reductase PanE/ApbA PFY08_09125 PF13520 Amino acid permease PFY08_09135 PF05791 Bacillus haemolytic enterotoxin (HBL) PFY08_09140 PF05791 Bacillus haemolytic enterotoxin (HBL) PFY08_09145 PF00754 F5/8 type C domain PFY08_09145 PF10633 NPCBM-associated, NEW3 domain of alpha-galactosidase PFY08_09145 PF13088 BNR repeat-like domain PFY08_09150 PF02073 Thermophilic metalloprotease (M29) PFY08_09165 PF00583 Acetyltransferase (GNAT) family PFY08_09170 PF01906 Putative heavy-metal-binding PFY08_09180 PF00440 Bacterial regulatory proteins, tetR family PFY08_09185 PF04198 Putative sugar-binding domain PFY08_09190 PF01791 DeoC/LacD family aldolase PFY08_09195 PF01773 Na+ dependent nucleoside transporter N-terminus PFY08_09195 PF07662 Na+ dependent nucleoside transporter C-terminus PFY08_09200 PF02885 Glycosyl transferase family, helical bundle domain PFY08_09200 PF00591 Glycosyl transferase family, a/b domain PFY08_09200 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain PFY08_09205 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region PFY08_09210 PF07301 Protein of unknown function (DUF1453) PFY08_09215 PF05979 Bacterial protein of unknown function (DUF896) PFY08_09220 PF05195 Aminopeptidase P, N-terminal domain PFY08_09220 PF00557 Metallopeptidase family M24 PFY08_09230 PF00394 Multicopper oxidase PFY08_09230 PF07731 Multicopper oxidase PFY08_09230 PF07732 Multicopper oxidase PFY08_09240 PF01131 DNA topoisomerase PFY08_09240 PF13342 C-terminal repeat of topoisomerase PFY08_09240 PF01751 Toprim domain PFY08_09240 PF01396 Topoisomerase DNA binding C4 zinc finger PFY08_09260 PF02525 Flavodoxin-like fold PFY08_09265 PF05525 Branched-chain amino acid transport protein PFY08_09270 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily PFY08_09275 PF04234 CopC domain PFY08_09275 PF05425 Copper resistance protein D PFY08_09275 PF13115 YtkA-like PFY08_09280 PF07987 Domain of unkown function (DUF1775) PFY08_09285 PF00892 EamA-like transporter family PFY08_09290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PFY08_09290 PF03466 LysR substrate binding domain PFY08_09295 PF02082 Transcriptional regulator PFY08_09300 PF01323 DSBA-like thioredoxin domain PFY08_09305 PF00881 Nitroreductase family PFY08_09315 PF01425 Amidase PFY08_09320 PF01594 AI-2E family transporter PFY08_09325 PF00056 lactate/malate dehydrogenase, NAD binding domain PFY08_09325 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain PFY08_09330 PF01593 Flavin containing amine oxidoreductase PFY08_09335 PF02492 CobW/HypB/UreG, nucleotide-binding domain PFY08_09335 PF07683 Cobalamin synthesis protein cobW C-terminal domain PFY08_09345 PF12399 Branched-chain amino acid ATP-binding cassette transporter PFY08_09345 PF00005 ABC transporter PFY08_09350 PF00005 ABC transporter PFY08_09355 PF02653 Branched-chain amino acid transport system / permease component PFY08_09365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PFY08_09365 PF03466 LysR substrate binding domain PFY08_09375 PF14552 Tautomerase enzyme PFY08_09385 PF01047 MarR family PFY08_09395 PF01654 Cytochrome bd terminal oxidase subunit I PFY08_09400 PF02322 Cytochrome bd terminal oxidase subunit II PFY08_09405 PF00664 ABC transporter transmembrane region PFY08_09405 PF00005 ABC transporter PFY08_09410 PF00664 ABC transporter transmembrane region PFY08_09410 PF00005 ABC transporter PFY08_09420 PF00535 Glycosyl transferase family 2 PFY08_09425 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family PFY08_09430 PF00132 Bacterial transferase hexapeptide (six repeats) PFY08_09455 PF17676 LD-carboxypeptidase C-terminal domain PFY08_09455 PF02016 LD-carboxypeptidase N-terminal domain PFY08_09460 PF00768 D-alanyl-D-alanine carboxypeptidase PFY08_09460 PF07943 Penicillin-binding protein 5, C-terminal domain PFY08_09475 PF01476 LysM domain PFY08_09475 PF00877 NlpC/P60 family PFY08_09485 PF00664 ABC transporter transmembrane region PFY08_09485 PF00005 ABC transporter PFY08_09490 PF00486 Transcriptional regulatory protein, C terminal PFY08_09490 PF00072 Response regulator receiver domain PFY08_09495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PFY08_09495 PF00989 PAS fold PFY08_09495 PF16736 Single Cache-like PFY08_09495 PF00512 His Kinase A (phospho-acceptor) domain PFY08_09505 PF00106 short chain dehydrogenase PFY08_09510 PF04439 Streptomycin adenylyltransferase PFY08_09515 PF01522 Polysaccharide deacetylase PFY08_09535 PF03447 Homoserine dehydrogenase, NAD binding domain PFY08_09535 PF00742 Homoserine dehydrogenase PFY08_09535 PF01842 ACT domain PFY08_09540 PF00291 Pyridoxal-phosphate dependent enzyme PFY08_09545 PF08544 GHMP kinases C terminal PFY08_09545 PF00288 GHMP kinases N terminal domain PFY08_09560 PF03816 Cell envelope-related transcriptional attenuator domain PFY08_09570 PF00072 Response regulator receiver domain PFY08_09570 PF00486 Transcriptional regulatory protein, C terminal PFY08_09575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PFY08_09575 PF16736 Single Cache-like PFY08_09575 PF00512 His Kinase A (phospho-acceptor) domain PFY08_09575 PF00989 PAS fold PFY08_09580 PF01522 Polysaccharide deacetylase PFY08_09590 PF02308 MgtC family PFY08_09600 PF00583 Acetyltransferase (GNAT) family PFY08_09605 PF04183 IucA / IucC family PFY08_09605 PF06276 Ferric iron reductase FhuF-like transporter PFY08_09610 PF04183 IucA / IucC family PFY08_09610 PF06276 Ferric iron reductase FhuF-like transporter PFY08_09615 PF13193 AMP-binding enzyme C-terminal domain PFY08_09615 PF00501 AMP-binding enzyme PFY08_09630 PF01261 Xylose isomerase-like TIM barrel PFY08_09635 PF00269 Small, acid-soluble spore proteins, alpha/beta type PFY08_09640 PF07690 Major Facilitator Superfamily PFY08_09645 PF01810 LysE type translocator PFY08_09650 PF00155 Aminotransferase class I and II PFY08_09650 PF00392 Bacterial regulatory proteins, gntR family PFY08_09660 PF01734 Patatin-like phospholipase PFY08_09685 PF00293 NUDIX domain PFY08_09685 PF13344 Haloacid dehalogenase-like hydrolase PFY08_09690 PF02540 NAD synthase PFY08_09695 PF02687 FtsX-like permease family PFY08_09700 PF18277 AbrB C-terminal domain PFY08_09700 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin PFY08_09705 PF00082 Subtilase family PFY08_09715 PF05656 Protein of unknown function (DUF805) PFY08_09735 PF03193 RsgA GTPase PFY08_09740 PF02743 Cache domain PFY08_09740 PF00672 HAMP domain PFY08_09740 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PFY08_09760 PF00210 Ferritin-like domain PFY08_09775 PF00296 Luciferase-like monooxygenase PFY08_09785 PF01593 Flavin containing amine oxidoreductase PFY08_09790 PF13302 Acetyltransferase (GNAT) domain PFY08_09795 PF00248 Aldo/keto reductase family PFY08_09800 PF07683 Cobalamin synthesis protein cobW C-terminal domain PFY08_09800 PF02492 CobW/HypB/UreG, nucleotide-binding domain PFY08_09805 PF00583 Acetyltransferase (GNAT) family PFY08_09810 PF01297 Zinc-uptake complex component A periplasmic PFY08_09820 PF13460 NAD(P)H-binding PFY08_09825 PF00724 NADH:flavin oxidoreductase / NADH oxidase family PFY08_09830 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain PFY08_09830 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain PFY08_09840 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PFY08_09845 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily PFY08_09855 PF00300 Histidine phosphatase superfamily (branch 1) PFY08_09865 PF08757 CotH kinase protein PFY08_09870 PF00293 NUDIX domain PFY08_09875 PF09335 SNARE associated Golgi protein PFY08_09880 PF14667 Polysaccharide biosynthesis C-terminal domain PFY08_09880 PF01943 Polysaccharide biosynthesis protein PFY08_09890 PF03773 Predicted permease PFY08_09895 PF09323 Domain of unknown function (DUF1980) PFY08_09900 PF03061 Thioesterase superfamily PFY08_09910 PF13396 Phospholipase_D-nuclease N-terminal PFY08_09910 PF13091 PLD-like domain PFY08_09925 PF13460 NAD(P)H-binding PFY08_09930 PF04306 Protein of unknown function (DUF456) PFY08_09935 PF03471 Transporter associated domain PFY08_09935 PF00571 CBS domain PFY08_09935 PF01595 Cyclin M transmembrane N-terminal domain PFY08_09950 PF05525 Branched-chain amino acid transport protein PFY08_09955 PF01588 Putative tRNA binding domain PFY08_09975 PF07454 Stage II sporulation protein P (SpoIIP) PFY08_09985 PF02557 D-alanyl-D-alanine carboxypeptidase PFY08_09995 PF01425 Amidase PFY08_10000 PF07690 Major Facilitator Superfamily PFY08_10010 PF01145 SPFH domain / Band 7 family PFY08_10015 PF07454 Stage II sporulation protein P (SpoIIP) PFY08_10040 PF01168 Alanine racemase, N-terminal domain PFY08_10040 PF00842 Alanine racemase, C-terminal domain PFY08_10060 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase PFY08_10065 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) PFY08_10065 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 PFY08_10070 PF00155 Aminotransferase class I and II PFY08_10070 PF00392 Bacterial regulatory proteins, gntR family PFY08_10100 PF00583 Acetyltransferase (GNAT) family PFY08_10115 PF06013 Proteins of 100 residues with WXG PFY08_10130 PF08817 WXG100 protein secretion system (Wss), protein YukD PFY08_10135 PF10140 WXG100 protein secretion system (Wss), protein YukC PFY08_10140 PF01580 FtsK/SpoIIIE family PFY08_10140 PF12538 DNA transporter PFY08_10245 PF09579 Sporulation protein YtfJ (Spore_YtfJ) PFY08_10270 PF01209 ubiE/COQ5 methyltransferase family PFY08_10275 PF01268 Formate--tetrahydrofolate ligase PFY08_10285 PF00270 DEAD/DEAH box helicase PFY08_10285 PF00271 Helicase conserved C-terminal domain PFY08_10290 PF01261 Xylose isomerase-like TIM barrel PFY08_10295 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily PFY08_10305 PF08240 Alcohol dehydrogenase GroES-like domain PFY08_10305 PF00107 Zinc-binding dehydrogenase PFY08_10310 PF04542 Sigma-70 region 2 PFY08_10310 PF08281 Sigma-70, region 4 PFY08_10320 PF03109 ABC1 family PFY08_10330 PF00258 Flavodoxin PFY08_10330 PF01613 Flavin reductase like domain PFY08_10340 PF00255 Glutathione peroxidase PFY08_10345 PF11992 Domain of unknown function (DUF3488) PFY08_10345 PF13559 Domain of unknown function (DUF4129) PFY08_10345 PF01841 Transglutaminase-like superfamily PFY08_10350 PF01882 Protein of unknown function DUF58 PFY08_10355 PF07726 ATPase family associated with various cellular activities (AAA) PFY08_10355 PF17863 AAA lid domain PFY08_10365 PF13247 4Fe-4S dicluster domain PFY08_10365 PF14711 Respiratory nitrate reductase beta C-terminal PFY08_10370 PF02613 Nitrate reductase delta subunit PFY08_10375 PF02665 Nitrate reductase gamma subunit PFY08_10380 PF00027 Cyclic nucleotide-binding domain PFY08_10380 PF00325 Bacterial regulatory proteins, crp family PFY08_10385 PF04055 Radical SAM superfamily PFY08_10385 PF06463 Molybdenum Cofactor Synthesis C PFY08_10390 PF00899 ThiF family PFY08_10395 PF00994 Probable molybdopterin binding domain PFY08_10395 PF03454 MoeA C-terminal region (domain IV) PFY08_10395 PF03453 MoeA N-terminal region (domain I and II) PFY08_10400 PF02391 MoaE protein PFY08_10410 PF07690 Major Facilitator Superfamily PFY08_10435 PF01903 CbiX PFY08_10440 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases PFY08_10445 PF00355 Rieske [2Fe-2S] domain PFY08_10450 PF04324 BFD-like [2Fe-2S] binding domain PFY08_10450 PF01077 Nitrite and sulphite reductase 4Fe-4S domain PFY08_10450 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain PFY08_10450 PF07992 Pyridine nucleotide-disulphide oxidoreductase PFY08_10450 PF18267 Rubredoxin NAD+ reductase C-terminal domain PFY08_10455 PF01814 Hemerythrin HHE cation binding domain PFY08_10455 PF04405 Domain of Unknown function (DUF542) PFY08_10490 PF04232 Stage V sporulation protein S (SpoVS) PFY08_10515 PF18801 response regulator aspartate phosphatase H, N terminal PFY08_10515 PF17874 MalT-like TPR region PFY08_10530 PF01966 HD domain PFY08_10535 PF00005 ABC transporter PFY08_10535 PF16326 ABC transporter C-terminal domain PFY08_10535 PF12848 ABC transporter PFY08_10550 PF00436 Single-strand binding protein family PFY08_10555 PF08712 Scaffold protein Nfu/NifU N terminal PFY08_10555 PF13769 Virulence factor PFY08_10565 PF06491 Disulphide isomerase PFY08_10570 PF04445 Putative SAM-dependent methyltransferase PFY08_10575 PF03485 Arginyl tRNA synthetase N terminal domain PFY08_10575 PF05746 DALR anticodon binding domain PFY08_10575 PF00750 tRNA synthetases class I (R) PFY08_10600 PF08264 Anticodon-binding domain of tRNA PFY08_10600 PF00133 tRNA synthetases class I (I, L, M and V) PFY08_10625 PF00152 tRNA synthetases class II (D, K and N) PFY08_10625 PF01336 OB-fold nucleic acid binding domain PFY08_10630 PF00209 Sodium:neurotransmitter symporter family PFY08_10645 PF10997 Alternate to MurJ PFY08_10650 PF13419 Haloacid dehalogenase-like hydrolase PFY08_10660 PF00465 Iron-containing alcohol dehydrogenase PFY08_10665 PF01177 Asp/Glu/Hydantoin racemase PFY08_10670 PF01980 tRNA-methyltransferase O PFY08_10675 PF00583 Acetyltransferase (GNAT) family PFY08_10680 PF11188 Protein of unknown function (DUF2975) PFY08_10685 PF13443 Cro/C1-type HTH DNA-binding domain PFY08_10690 PF08645 Polynucleotide kinase 3 phosphatase PFY08_10700 PF00005 ABC transporter PFY08_10705 PF05975 Bacterial ABC transporter protein EcsB PFY08_10710 PF14005 YpjP-like protein PFY08_10715 PF13419 Haloacid dehalogenase-like hydrolase PFY08_10730 PF07930 D-aminopeptidase, domain B PFY08_10730 PF00144 Beta-lactamase PFY08_10735 PF00303 Thymidylate synthase PFY08_10740 PF00186 Dihydrofolate reductase PFY08_10745 PF00905 Penicillin binding protein transpeptidase domain PFY08_10745 PF03717 Penicillin-binding Protein dimerisation domain PFY08_10745 PF05223 NTF2-like N-terminal transpeptidase domain PFY08_10750 PF02525 Flavodoxin-like fold PFY08_10755 PF01553 Acyltransferase PFY08_10760 PF03006 Haemolysin-III related PFY08_10765 PF02416 mttA/Hcf106 family PFY08_10770 PF00902 Sec-independent protein translocase protein (TatC) PFY08_10780 PF02645 Uncharacterised protein, DegV family COG1307 PFY08_10790 PF02630 SCO1/SenC PFY08_10795 PF00011 Hsp20/alpha crystallin family PFY08_10800 PF13537 Glutamine amidotransferase domain PFY08_10800 PF00733 Asparagine synthase PFY08_10815 PF05036 Sporulation related domain PFY08_10815 PF01520 N-acetylmuramoyl-L-alanine amidase PFY08_10820 PF01497 Periplasmic binding protein PFY08_10825 PF01063 Amino-transferase class IV PFY08_10830 PF00881 Nitroreductase family PFY08_10840 PF00857 Isochorismatase family PFY08_10850 PF00011 Hsp20/alpha crystallin family PFY08_10855 PF00924 Mechanosensitive ion channel PFY08_10860 PF13185 GAF domain PFY08_10860 PF07730 Histidine kinase PFY08_10865 PF00072 Response regulator receiver domain PFY08_10865 PF00196 Bacterial regulatory proteins, luxR family PFY08_10870 PF01380 SIS domain PFY08_10870 PF01418 Helix-turn-helix domain, rpiR family PFY08_10875 PF02567 Phenazine biosynthesis-like protein PFY08_10880 PF08240 Alcohol dehydrogenase GroES-like domain PFY08_10880 PF00107 Zinc-binding dehydrogenase PFY08_10895 PF02782 FGGY family of carbohydrate kinases, C-terminal domain PFY08_10895 PF00370 FGGY family of carbohydrate kinases, N-terminal domain PFY08_10900 PF02447 GntP family permease PFY08_10905 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase PFY08_10905 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain PFY08_10925 PF03358 NADPH-dependent FMN reductase PFY08_10940 PF00005 ABC transporter PFY08_10940 PF00571 CBS domain PFY08_10945 PF00528 Binding-protein-dependent transport system inner membrane component PFY08_10950 PF13520 Amino acid permease PFY08_10980 PF01595 Cyclin M transmembrane N-terminal domain PFY08_10980 PF03471 Transporter associated domain PFY08_10980 PF00571 CBS domain PFY08_10985 PF00171 Aldehyde dehydrogenase family PFY08_10990 PF07997 Protein of unknown function (DUF1694) PFY08_10995 PF09385 Histidine kinase N terminal PFY08_11005 PF00202 Aminotransferase class-III PFY08_11010 PF01144 Coenzyme A transferase PFY08_11015 PF01144 Coenzyme A transferase PFY08_11020 PF01546 Peptidase family M20/M25/M40 PFY08_11020 PF07687 Peptidase dimerisation domain PFY08_11025 PF00583 Acetyltransferase (GNAT) family PFY08_11030 PF00158 Sigma-54 interaction domain PFY08_11030 PF02954 Bacterial regulatory protein, Fis family PFY08_11030 PF13426 PAS domain PFY08_11035 PF12544 Lysine-2,3-aminomutase PFY08_11040 PF14122 YokU-like protein, putative antitoxin PFY08_11045 PF06855 YozE SAM-like fold PFY08_11060 PF14162 YozD-like protein PFY08_11070 PF00069 Protein kinase domain PFY08_11070 PF08239 Bacterial SH3 domain PFY08_11080 PF01569 PAP2 superfamily PFY08_11085 PF01545 Cation efflux family PFY08_11085 PF16916 Dimerisation domain of Zinc Transporter PFY08_11090 PF00085 Thioredoxin PFY08_11160 PF10676 Spore germination protein gerPA/gerPF PFY08_11175 PF00106 short chain dehydrogenase PFY08_11195 PF00912 Transglycosylase PFY08_11195 PF00905 Penicillin binding protein transpeptidase domain PFY08_11205 PF07690 Major Facilitator Superfamily PFY08_11210 PF01521 Iron-sulphur cluster biosynthesis PFY08_11215 PF00285 Citrate synthase, C-terminal domain PFY08_11220 PF03972 MmgE/PrpD family PFY08_11230 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PFY08_11230 PF02770 Acyl-CoA dehydrogenase, middle domain PFY08_11230 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PFY08_11235 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase PFY08_11235 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase PFY08_11240 PF00171 Aldehyde dehydrogenase family PFY08_11245 PF01810 LysE type translocator PFY08_11250 PF00378 Enoyl-CoA hydratase/isomerase PFY08_11265 PF00149 Calcineurin-like phosphoesterase PFY08_11265 PF12320 Type 5 capsule protein repressor C-terminal domain PFY08_11270 PF13476 AAA domain PFY08_11280 PF01022 Bacterial regulatory protein, arsR family PFY08_11295 PF07690 Major Facilitator Superfamily PFY08_11300 PF00106 short chain dehydrogenase PFY08_11305 PF00425 chorismate binding enzyme PFY08_11310 PF13193 AMP-binding enzyme C-terminal domain PFY08_11310 PF00501 AMP-binding enzyme PFY08_11315 PF00550 Phosphopantetheine attachment site PFY08_11315 PF00857 Isochorismatase family PFY08_11320 PF00975 Thioesterase domain PFY08_11320 PF00550 Phosphopantetheine attachment site PFY08_11320 PF00668 Condensation domain PFY08_11320 PF13193 AMP-binding enzyme C-terminal domain PFY08_11320 PF00501 AMP-binding enzyme PFY08_11325 PF03621 MbtH-like protein PFY08_11330 PF07690 Major Facilitator Superfamily PFY08_11345 PF00216 Bacterial DNA-binding protein PFY08_11355 PF05163 DinB family PFY08_11360 PF00082 Subtilase family PFY08_11365 PF01235 Sodium:alanine symporter family PFY08_11385 PF01479 S4 domain PFY08_11385 PF00849 RNA pseudouridylate synthase PFY08_11390 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain PFY08_11390 PF02824 TGS domain PFY08_11390 PF03129 Anticodon binding domain PFY08_11390 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) PFY08_11395 PF00005 ABC transporter PFY08_11420 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PFY08_11420 PF00205 Thiamine pyrophosphate enzyme, central domain PFY08_11420 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain PFY08_11430 PF00753 Metallo-beta-lactamase superfamily PFY08_11455 PF00027 Cyclic nucleotide-binding domain PFY08_11465 PF00561 alpha/beta hydrolase fold PFY08_11470 PF00293 NUDIX domain PFY08_11480 PF16123 Hydroxyacylglutathione hydrolase C-terminus PFY08_11480 PF00753 Metallo-beta-lactamase superfamily PFY08_11490 PF03176 MMPL family PFY08_11510 PF00302 Chloramphenicol acetyltransferase PFY08_11525 PF00583 Acetyltransferase (GNAT) family PFY08_11550 PF01593 Flavin containing amine oxidoreductase PFY08_11560 PF13302 Acetyltransferase (GNAT) domain PFY08_11570 PF00313 'Cold-shock' DNA-binding domain PFY08_11590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PFY08_11590 PF03466 LysR substrate binding domain PFY08_11595 PF02774 Semialdehyde dehydrogenase, dimerisation domain PFY08_11595 PF01118 Semialdehyde dehydrogenase, NAD binding domain PFY08_11615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PFY08_11615 PF03466 LysR substrate binding domain PFY08_11620 PF03473 MOSC domain PFY08_11620 PF03475 3-alpha domain PFY08_11635 PF00005 ABC transporter PFY08_11635 PF00664 ABC transporter transmembrane region PFY08_11640 PF00005 ABC transporter PFY08_11640 PF00664 ABC transporter transmembrane region PFY08_11665 PF01810 LysE type translocator PFY08_11670 PF07883 Cupin domain PFY08_11670 PF01381 Helix-turn-helix PFY08_11700 PF07992 Pyridine nucleotide-disulphide oxidoreductase PFY08_11700 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain PFY08_11705 PF04542 Sigma-70 region 2 PFY08_11705 PF08281 Sigma-70, region 4 PFY08_11705 PF12680 SnoaL-like domain PFY08_11730 PF02638 Glycosyl hydrolase-like 10 PFY08_11740 PF02378 Phosphotransferase system, EIIC PFY08_11750 PF03702 Anhydro-N-acetylmuramic acid kinase PFY08_11755 PF01869 BadF/BadG/BcrA/BcrD ATPase family PFY08_11760 PF02660 Glycerol-3-phosphate acyltransferase PFY08_11765 PF00266 Aminotransferase class-V PFY08_11770 PF00291 Pyridoxal-phosphate dependent enzyme PFY08_11775 PF01047 MarR family PFY08_11780 PF07690 Major Facilitator Superfamily PFY08_11795 PF16123 Hydroxyacylglutathione hydrolase C-terminus PFY08_11795 PF00753 Metallo-beta-lactamase superfamily PFY08_11810 PF00271 Helicase conserved C-terminal domain PFY08_11810 PF00270 DEAD/DEAH box helicase PFY08_11820 PF17932 Tetracyclin repressor-like, C-terminal domain PFY08_11820 PF00440 Bacterial regulatory proteins, tetR family PFY08_11890 PF09680 Family of unknown function PFY08_11940 PF09313 Domain of unknown function (DUF1971) PFY08_11940 PF03848 Tellurite resistance protein TehB PFY08_11955 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PFY08_11955 PF00205 Thiamine pyrophosphate enzyme, central domain PFY08_11955 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain PFY08_11960 PF01047 MarR family PFY08_11965 PF00300 Histidine phosphatase superfamily (branch 1) PFY08_11970 PF14171 Toxin SpoIISA, type II toxin-antitoxin system PFY08_11990 PF07687 Peptidase dimerisation domain PFY08_11990 PF01546 Peptidase family M20/M25/M40 PFY08_12005 PF04371 Porphyromonas-type peptidyl-arginine deiminase PFY08_12010 PF00196 Bacterial regulatory proteins, luxR family PFY08_12010 PF00072 Response regulator receiver domain PFY08_12020 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin PFY08_12020 PF18277 AbrB C-terminal domain PFY08_12030 PF01925 Sulfite exporter TauE/SafE PFY08_12035 PF00132 Bacterial transferase hexapeptide (six repeats) PFY08_12040 PF00768 D-alanyl-D-alanine carboxypeptidase PFY08_12040 PF07943 Penicillin-binding protein 5, C-terminal domain PFY08_12055 PF07690 Major Facilitator Superfamily PFY08_12060 PF00501 AMP-binding enzyme PFY08_12060 PF13193 AMP-binding enzyme C-terminal domain PFY08_12060 PF00668 Condensation domain PFY08_12060 PF00550 Phosphopantetheine attachment site PFY08_12065 PF00550 Phosphopantetheine attachment site PFY08_12065 PF00668 Condensation domain PFY08_12065 PF13193 AMP-binding enzyme C-terminal domain PFY08_12065 PF07993 Male sterility protein PFY08_12065 PF00501 AMP-binding enzyme PFY08_12075 PF01648 4'-phosphopantetheinyl transferase superfamily PFY08_12080 PF00975 Thioesterase domain PFY08_12090 PF05139 Erythromycin esterase PFY08_12105 PF13302 Acetyltransferase (GNAT) domain PFY08_12115 PF01520 N-acetylmuramoyl-L-alanine amidase PFY08_12115 PF00395 S-layer homology domain PFY08_12145 PF11954 Domain of unknown function (DUF3471) PFY08_12145 PF00144 Beta-lactamase PFY08_12150 PF00905 Penicillin binding protein transpeptidase domain PFY08_12150 PF05223 NTF2-like N-terminal transpeptidase domain PFY08_12150 PF03717 Penicillin-binding Protein dimerisation domain PFY08_12155 PF04542 Sigma-70 region 2 PFY08_12155 PF08281 Sigma-70, region 4 PFY08_12165 PF00905 Penicillin binding protein transpeptidase domain PFY08_12165 PF03717 Penicillin-binding Protein dimerisation domain PFY08_12170 PF00905 Penicillin binding protein transpeptidase domain PFY08_12170 PF03717 Penicillin-binding Protein dimerisation domain PFY08_12180 PF00149 Calcineurin-like phosphoesterase PFY08_12190 PF00005 ABC transporter PFY08_12200 PF08359 YsiA-like protein, C-terminal region PFY08_12200 PF00440 Bacterial regulatory proteins, tetR family PFY08_12215 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PFY08_12215 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PFY08_12215 PF02770 Acyl-CoA dehydrogenase, middle domain PFY08_12220 PF00289 Biotin carboxylase, N-terminal domain PFY08_12220 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain PFY08_12220 PF02785 Biotin carboxylase C-terminal domain PFY08_12225 PF00364 Biotin-requiring enzyme PFY08_12230 PF00682 HMGL-like PFY08_12235 PF00378 Enoyl-CoA hydratase/isomerase PFY08_12240 PF01039 Carboxyl transferase domain PFY08_12245 PF16177 Acetyl-coenzyme A synthetase N-terminus PFY08_12245 PF00501 AMP-binding enzyme PFY08_12245 PF13193 AMP-binding enzyme C-terminal domain PFY08_12270 PF00485 Phosphoribulokinase / Uridine kinase family PFY08_12295 PF00768 D-alanyl-D-alanine carboxypeptidase PFY08_12295 PF07943 Penicillin-binding protein 5, C-terminal domain PFY08_12300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PFY08_12300 PF00512 His Kinase A (phospho-acceptor) domain PFY08_12305 PF00486 Transcriptional regulatory protein, C terminal PFY08_12305 PF00072 Response regulator receiver domain PFY08_12310 PF01966 HD domain PFY08_12315 PF13021 Domain of unknown function (DUF3885) PFY08_12320 PF01048 Phosphorylase superfamily PFY08_12335 PF07504 Fungalysin/Thermolysin Propeptide Motif PFY08_12335 PF03413 Peptidase propeptide and YPEB domain PFY08_12335 PF01447 Thermolysin metallopeptidase, catalytic domain PFY08_12335 PF02868 Thermolysin metallopeptidase, alpha-helical domain PFY08_12340 PF17853 GGDEF-like domain PFY08_12340 PF12833 Helix-turn-helix domain PFY08_12370 PF17760 UvrA interaction domain PFY08_12370 PF00005 ABC transporter PFY08_12370 PF17755 UvrA DNA-binding domain PFY08_12375 PF00376 MerR family regulatory protein PFY08_12375 PF09278 MerR, DNA binding PFY08_12380 PF07690 Major Facilitator Superfamily PFY08_12390 PF01638 HxlR-like helix-turn-helix PFY08_12395 PF13847 Methyltransferase domain PFY08_12435 PF00155 Aminotransferase class I and II PFY08_12435 PF00392 Bacterial regulatory proteins, gntR family PFY08_12445 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal PFY08_12445 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal PFY08_12460 PF08240 Alcohol dehydrogenase GroES-like domain PFY08_12460 PF00107 Zinc-binding dehydrogenase PFY08_12470 PF04239 Protein of unknown function (DUF421) PFY08_12485 PF08450 SMP-30/Gluconolactonase/LRE-like region PFY08_12495 PF01921 tRNA synthetases class I (K) PFY08_12500 PF07486 Cell Wall Hydrolase PFY08_12505 PF00561 alpha/beta hydrolase fold PFY08_12515 PF00072 Response regulator receiver domain PFY08_12515 PF00486 Transcriptional regulatory protein, C terminal PFY08_12520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PFY08_12530 PF12848 ABC transporter PFY08_12530 PF00005 ABC transporter PFY08_12540 PF00005 ABC transporter PFY08_12545 PF02687 FtsX-like permease family PFY08_12565 PF01842 ACT domain PFY08_12565 PF03447 Homoserine dehydrogenase, NAD binding domain PFY08_12565 PF00742 Homoserine dehydrogenase PFY08_12570 PF00155 Aminotransferase class I and II PFY08_12570 PF00392 Bacterial regulatory proteins, gntR family PFY08_12575 PF01820 D-ala D-ala ligase N-terminus PFY08_12575 PF07478 D-ala D-ala ligase C-terminus PFY08_12580 PF03070 TENA/THI-4/PQQC family PFY08_12610 PF00589 Phage integrase family PFY08_12610 PF14659 Phage integrase, N-terminal SAM-like domain PFY08_12635 PF01381 Helix-turn-helix PFY08_12660 PF18277 AbrB C-terminal domain PFY08_12660 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin PFY08_12715 PF00589 Phage integrase family PFY08_12830 PF04688 SPP1 phage holin PFY08_12835 PF01510 N-acetylmuramoyl-L-alanine amidase PFY08_12835 PF01471 Putative peptidoglycan binding domain PFY08_12835 PF01476 LysM domain PFY08_12880 PF00067 Cytochrome P450 PFY08_12890 PF00132 Bacterial transferase hexapeptide (six repeats) PFY08_12895 PF07561 Domain of Unknown Function (DUF1540) PFY08_12905 PF00067 Cytochrome P450 PFY08_12920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PFY08_12920 PF00989 PAS fold PFY08_12920 PF00512 His Kinase A (phospho-acceptor) domain PFY08_12920 PF13426 PAS domain PFY08_12920 PF13188 PAS domain PFY08_12925 PF03717 Penicillin-binding Protein dimerisation domain PFY08_12925 PF00905 Penicillin binding protein transpeptidase domain PFY08_12930 PF10502 Signal peptidase, peptidase S26 PFY08_12935 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase PFY08_12940 PF01177 Asp/Glu/Hydantoin racemase PFY08_12945 PF07155 ECF-type riboflavin transporter, S component PFY08_12950 PF00005 ABC transporter PFY08_12950 PF12558 ATP-binding cassette cobalt transporter PFY08_12965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PFY08_12965 PF00512 His Kinase A (phospho-acceptor) domain PFY08_13010 PF13344 Haloacid dehalogenase-like hydrolase PFY08_13010 PF00293 NUDIX domain PFY08_13030 PF04229 GrpB protein PFY08_13035 PF00107 Zinc-binding dehydrogenase PFY08_13035 PF08240 Alcohol dehydrogenase GroES-like domain PFY08_13040 PF01569 PAP2 superfamily PFY08_13045 PF00905 Penicillin binding protein transpeptidase domain PFY08_13045 PF03717 Penicillin-binding Protein dimerisation domain PFY08_13045 PF03793 PASTA domain PFY08_13050 PF00440 Bacterial regulatory proteins, tetR family PFY08_13050 PF08361 MAATS-type transcriptional repressor, C-terminal region PFY08_13105 PF13411 MerR HTH family regulatory protein PFY08_13105 PF07739 TipAS antibiotic-recognition domain PFY08_13110 PF07690 Major Facilitator Superfamily PFY08_13115 PF06445 GyrI-like small molecule binding domain PFY08_13115 PF13411 MerR HTH family regulatory protein PFY08_13135 PF03009 Glycerophosphoryl diester phosphodiesterase family PFY08_13155 PF00392 Bacterial regulatory proteins, gntR family PFY08_13155 PF00155 Aminotransferase class I and II PFY08_13160 PF00892 EamA-like transporter family PFY08_13165 PF01270 Glycosyl hydrolases family 8 PFY08_13170 PF01156 Inosine-uridine preferring nucleoside hydrolase PFY08_13185 PF00293 NUDIX domain PFY08_13185 PF13344 Haloacid dehalogenase-like hydrolase PFY08_13195 PF00144 Beta-lactamase PFY08_13205 PF07690 Major Facilitator Superfamily PFY08_13220 PF00293 NUDIX domain PFY08_13220 PF09297 NADH pyrophosphatase zinc ribbon domain PFY08_13225 PF00712 DNA polymerase III beta subunit, N-terminal domain PFY08_13225 PF02767 DNA polymerase III beta subunit, central domain PFY08_13225 PF02768 DNA polymerase III beta subunit, C-terminal domain PFY08_13235 PF12706 Beta-lactamase superfamily domain PFY08_13245 PF01042 Endoribonuclease L-PSP PFY08_13250 PF09234 Domain of unknown function (DUF1963) PFY08_13275 PF01734 Patatin-like phospholipase PFY08_13280 PF08000 Bacterial PH domain PFY08_13290 PF12867 DinB superfamily PFY08_13305 PF02673 Bacitracin resistance protein BacA PFY08_13315 PF01541 GIY-YIG catalytic domain PFY08_13345 PF00005 ABC transporter PFY08_13365 PF01266 FAD dependent oxidoreductase PFY08_13395 PF13419 Haloacid dehalogenase-like hydrolase PFY08_13400 PF00486 Transcriptional regulatory protein, C terminal PFY08_13400 PF00072 Response regulator receiver domain PFY08_13405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PFY08_13405 PF00512 His Kinase A (phospho-acceptor) domain PFY08_13405 PF00989 PAS fold PFY08_13405 PF16736 Single Cache-like PFY08_13420 PF00005 ABC transporter PFY08_13425 PF02687 FtsX-like permease family PFY08_13425 PF12704 MacB-like periplasmic core domain PFY08_13435 PF07859 alpha/beta hydrolase fold PFY08_13440 PF00282 Pyridoxal-dependent decarboxylase conserved domain PFY08_13445 PF00501 AMP-binding enzyme PFY08_13445 PF13193 AMP-binding enzyme C-terminal domain PFY08_13445 PF00668 Condensation domain PFY08_13445 PF00550 Phosphopantetheine attachment site PFY08_13455 PF00128 Alpha amylase, catalytic domain PFY08_13455 PF03714 Bacterial pullanase-associated domain PFY08_13455 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) PFY08_13460 PF07504 Fungalysin/Thermolysin Propeptide Motif PFY08_13460 PF02868 Thermolysin metallopeptidase, alpha-helical domain PFY08_13460 PF01447 Thermolysin metallopeptidase, catalytic domain PFY08_13460 PF03413 Peptidase propeptide and YPEB domain PFY08_13465 PF02872 5'-nucleotidase, C-terminal domain PFY08_13465 PF00149 Calcineurin-like phosphoesterase PFY08_13480 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily PFY08_13485 PF00344 SecY translocase PFY08_13490 PF00892 EamA-like transporter family PFY08_13495 PF00392 Bacterial regulatory proteins, gntR family PFY08_13495 PF00155 Aminotransferase class I and II PFY08_13500 PF08240 Alcohol dehydrogenase GroES-like domain PFY08_13500 PF00107 Zinc-binding dehydrogenase PFY08_13505 PF00561 alpha/beta hydrolase fold PFY08_13530 PF06081 Aromatic acid exporter family member 1 PFY08_13545 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) PFY08_13550 PF14620 YpeB sporulation PFY08_13550 PF03413 Peptidase propeptide and YPEB domain PFY08_13555 PF01471 Putative peptidoglycan binding domain PFY08_13555 PF07486 Cell Wall Hydrolase PFY08_13575 PF03301 Tryptophan 2,3-dioxygenase PFY08_13580 PF04199 Putative cyclase PFY08_13585 PF00266 Aminotransferase class-V PFY08_13590 PF00440 Bacterial regulatory proteins, tetR family PFY08_13590 PF08359 YsiA-like protein, C-terminal region PFY08_13610 PF02954 Bacterial regulatory protein, Fis family PFY08_13610 PF01590 GAF domain PFY08_13610 PF00158 Sigma-54 interaction domain PFY08_13620 PF13302 Acetyltransferase (GNAT) domain PFY08_13625 PF00455 DeoR C terminal sensor domain PFY08_13625 PF08220 DeoR-like helix-turn-helix domain PFY08_13640 PF02082 Transcriptional regulator PFY08_13655 PF07992 Pyridine nucleotide-disulphide oxidoreductase PFY08_13655 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain PFY08_13660 PF00364 Biotin-requiring enzyme PFY08_13660 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) PFY08_13660 PF02817 e3 binding domain PFY08_13665 PF02779 Transketolase, pyrimidine binding domain PFY08_13665 PF02780 Transketolase, C-terminal domain PFY08_13670 PF00676 Dehydrogenase E1 component PFY08_13680 PF00106 short chain dehydrogenase PFY08_13685 PF13789 Domain of unknown function (DUF4181) PFY08_13710 PF00528 Binding-protein-dependent transport system inner membrane component PFY08_13715 PF00005 ABC transporter PFY08_13715 PF00571 CBS domain PFY08_13720 PF04069 Substrate binding domain of ABC-type glycine betaine transport system PFY08_13725 PF00574 Clp protease PFY08_13740 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) PFY08_13745 PF13673 Acetyltransferase (GNAT) domain PFY08_13750 PF18416 N-acetylglucosamine binding protein domain 2 PFY08_13750 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading PFY08_13755 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase PFY08_13760 PF03781 Sulfatase-modifying factor enzyme 1 PFY08_13775 PF10990 Protein of unknown function (DUF2809) PFY08_13780 PF08241 Methyltransferase domain PFY08_13785 PF04237 YjbR PFY08_13835 PF13538 UvrD-like helicase C-terminal domain PFY08_13850 PF00271 Helicase conserved C-terminal domain PFY08_13850 PF00570 HRDC domain PFY08_13850 PF16124 RecQ zinc-binding PFY08_13850 PF00270 DEAD/DEAH box helicase PFY08_13850 PF09382 RQC domain PFY08_13885 PF12123 N-acetylmuramoyl-l-alanine amidase PFY08_13885 PF01510 N-acetylmuramoyl-L-alanine amidase PFY08_13910 PF01368 DHH family PFY08_13910 PF02833 DHHA2 domain PFY08_13915 PF18416 N-acetylglucosamine binding protein domain 2 PFY08_13915 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading PFY08_13930 PF02627 Carboxymuconolactone decarboxylase family PFY08_13935 PF01235 Sodium:alanine symporter family PFY08_13940 PF00171 Aldehyde dehydrogenase family PFY08_13945 PF00701 Dihydrodipicolinate synthetase family PFY08_13950 PF05544 Proline racemase PFY08_13955 PF05544 Proline racemase PFY08_13960 PF01266 FAD dependent oxidoreductase PFY08_13965 PF02954 Bacterial regulatory protein, Fis family PFY08_13965 PF13188 PAS domain PFY08_13965 PF00158 Sigma-54 interaction domain PFY08_13970 PF04324 BFD-like [2Fe-2S] binding domain PFY08_13970 PF07992 Pyridine nucleotide-disulphide oxidoreductase PFY08_13980 PF04324 BFD-like [2Fe-2S] binding domain PFY08_13980 PF07992 Pyridine nucleotide-disulphide oxidoreductase PFY08_13995 PF08876 Domain of unknown function (DUF1836) PFY08_14005 PF01966 HD domain PFY08_14010 PF09335 SNARE associated Golgi protein PFY08_14020 PF04914 DltD protein PFY08_14030 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PFY08_14035 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain PFY08_14035 PF00877 NlpC/P60 family PFY08_14040 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain PFY08_14040 PF13378 Enolase C-terminal domain-like PFY08_14055 PF00248 Aldo/keto reductase family PFY08_14060 PF01965 DJ-1/PfpI family PFY08_14090 PF02129 X-Pro dipeptidyl-peptidase (S15 family) PFY08_14090 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain PFY08_14100 PF00672 HAMP domain PFY08_14100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PFY08_14100 PF00512 His Kinase A (phospho-acceptor) domain PFY08_14105 PF00486 Transcriptional regulatory protein, C terminal PFY08_14105 PF00072 Response regulator receiver domain PFY08_14125 PF13419 Haloacid dehalogenase-like hydrolase PFY08_14130 PF01048 Phosphorylase superfamily PFY08_14135 PF03808 Glycosyl transferase WecB/TagA/CpsF family PFY08_14140 PF08439 Oligopeptidase F PFY08_14140 PF01432 Peptidase family M3 PFY08_14145 PF02645 Uncharacterised protein, DegV family COG1307 PFY08_14150 PF07552 Spore Coat Protein X and V domain PFY08_14185 PF07690 Major Facilitator Superfamily PFY08_14195 PF04519 Polymer-forming cytoskeletal PFY08_14200 PF13171 Protein of unknown function (DUF4004) PFY08_14205 PF12793 Sugar transport-related sRNA regulator N-term PFY08_14205 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PFY08_14210 PF07690 Major Facilitator Superfamily PFY08_14230 PF04226 Transglycosylase associated protein PFY08_14245 PF08241 Methyltransferase domain PFY08_14280 PF00155 Aminotransferase class I and II PFY08_14285 PF07977 FabA-like domain PFY08_14290 PF03630 Fumble PFY08_14360 PF01594 AI-2E family transporter PFY08_14375 PF00296 Luciferase-like monooxygenase PFY08_14380 PF00528 Binding-protein-dependent transport system inner membrane component PFY08_14385 PF09084 NMT1/THI5 like PFY08_14390 PF00005 ABC transporter PFY08_14425 PF02522 Aminoglycoside 3-N-acetyltransferase PFY08_14435 PF13536 Putative multidrug resistance efflux transporter PFY08_14440 PF12867 DinB superfamily PFY08_14460 PF08713 DNA alkylation repair enzyme PFY08_14465 PF00291 Pyridoxal-phosphate dependent enzyme PFY08_14470 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily PFY08_14480 PF01522 Polysaccharide deacetylase PFY08_14490 PF03741 Integral membrane protein TerC family PFY08_14495 PF00884 Sulfatase PFY08_14500 PF12848 ABC transporter PFY08_14500 PF00005 ABC transporter PFY08_14505 PF03176 MMPL family PFY08_14510 PF16295 Tetracyclin repressor-like, C-terminal domain PFY08_14510 PF00440 Bacterial regulatory proteins, tetR family PFY08_14520 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) PFY08_14525 PF02153 Prephenate dehydrogenase PFY08_14525 PF01842 ACT domain PFY08_14530 PF00155 Aminotransferase class I and II PFY08_14535 PF01264 Chorismate synthase PFY08_14540 PF01817 Chorismate mutase type II PFY08_14540 PF00793 DAHP synthetase I family PFY08_14560 PF01636 Phosphotransferase enzyme family PFY08_14580 PF01476 LysM domain PFY08_14580 PF06725 3D domain PFY08_14590 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily PFY08_14595 PF01565 FAD binding domain PFY08_14595 PF08031 Berberine and berberine like PFY08_14600 PF07690 Major Facilitator Superfamily PFY08_14605 PF00440 Bacterial regulatory proteins, tetR family PFY08_14615 PF06039 Malate:quinone oxidoreductase (Mqo) PFY08_14620 PF13407 Periplasmic binding protein domain PFY08_14625 PF02653 Branched-chain amino acid transport system / permease component PFY08_14630 PF02653 Branched-chain amino acid transport system / permease component PFY08_14635 PF00005 ABC transporter PFY08_14640 PF00325 Bacterial regulatory proteins, crp family PFY08_14640 PF04198 Putative sugar-binding domain PFY08_14645 PF02782 FGGY family of carbohydrate kinases, C-terminal domain PFY08_14645 PF00370 FGGY family of carbohydrate kinases, N-terminal domain PFY08_14655 PF01791 DeoC/LacD family aldolase PFY08_14670 PF03992 Antibiotic biosynthesis monooxygenase PFY08_14690 PF01773 Na+ dependent nucleoside transporter N-terminus PFY08_14690 PF07662 Na+ dependent nucleoside transporter C-terminus PFY08_14695 PF00171 Aldehyde dehydrogenase family PFY08_14700 PF01472 PUA domain PFY08_14700 PF00696 Amino acid kinase family PFY08_14705 PF03807 NADP oxidoreductase coenzyme F420-dependent PFY08_14705 PF14748 Pyrroline-5-carboxylate reductase dimerisation PFY08_14710 PF01546 Peptidase family M20/M25/M40 PFY08_14715 PF01614 Bacterial transcriptional regulator PFY08_14715 PF09339 IclR helix-turn-helix domain PFY08_14720 PF00324 Amino acid permease PFY08_14730 PF00487 Fatty acid desaturase PFY08_14735 PF05547 Immune inhibitor A peptidase M6 PFY08_14740 PF04294 VanW like protein PFY08_14745 PF00245 Alkaline phosphatase PFY08_14750 PF11188 Protein of unknown function (DUF2975) PFY08_14755 PF13443 Cro/C1-type HTH DNA-binding domain PFY08_14775 PF13302 Acetyltransferase (GNAT) domain PFY08_14780 PF12681 Glyoxalase-like domain PFY08_14805 PF17863 AAA lid domain PFY08_14805 PF07726 ATPase family associated with various cellular activities (AAA) PFY08_14820 PF07690 Major Facilitator Superfamily PFY08_14830 PF00535 Glycosyl transferase family 2 PFY08_14845 PF00535 Glycosyl transferase family 2 PFY08_14850 PF00535 Glycosyl transferase family 2 PFY08_14860 PF00202 Aminotransferase class-III PFY08_14865 PF06628 Catalase-related immune-responsive PFY08_14865 PF00199 Catalase PFY08_14870 PF08453 Peptidase family M9 N-terminal PFY08_14870 PF04151 Bacterial pre-peptidase C-terminal domain PFY08_14870 PF18496 Collagenase G catalytic helper subdomain PFY08_14870 PF01752 Collagenase PFY08_14880 PF13382 Adenine deaminase C-terminal domain PFY08_14880 PF01979 Amidohydrolase family PFY08_14885 PF00144 Beta-lactamase PFY08_14905 PF17863 AAA lid domain PFY08_14905 PF07726 ATPase family associated with various cellular activities (AAA) PFY08_14955 PF04740 LXG domain of WXG superfamily PFY08_14955 PF14436 Bacterial EndoU nuclease PFY08_14975 PF00881 Nitroreductase family PFY08_14980 PF01047 MarR family PFY08_14985 PF00679 Elongation factor G C-terminus PFY08_14985 PF14492 Elongation Factor G, domain II PFY08_14985 PF03764 Elongation factor G, domain IV PFY08_14985 PF00009 Elongation factor Tu GTP binding domain PFY08_14995 PF00293 NUDIX domain PFY08_15000 PF05406 WGR domain PFY08_15010 PF16363 GDP-mannose 4,6 dehydratase PFY08_15020 PF12833 Helix-turn-helix domain PFY08_15025 PF11734 TilS substrate C-terminal domain PFY08_15025 PF14437 MafB19-like deaminase PFY08_15025 PF01171 PP-loop family PFY08_15030 PF00583 Acetyltransferase (GNAT) family PFY08_15045 PF00892 EamA-like transporter family PFY08_15050 PF00155 Aminotransferase class I and II PFY08_15050 PF00392 Bacterial regulatory proteins, gntR family PFY08_15065 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 PFY08_15070 PF13031 Protein of unknown function (DUF3892) PFY08_15105 PF01925 Sulfite exporter TauE/SafE PFY08_15115 PF00324 Amino acid permease PFY08_15125 PF08713 DNA alkylation repair enzyme PFY08_15135 PF00512 His Kinase A (phospho-acceptor) domain PFY08_15135 PF00672 HAMP domain PFY08_15135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PFY08_15135 PF18698 Histidine kinase sensor domain PFY08_15135 PF00989 PAS fold PFY08_15140 PF00486 Transcriptional regulatory protein, C terminal PFY08_15140 PF00072 Response regulator receiver domain PFY08_15150 PF00005 ABC transporter PFY08_15165 PF00293 NUDIX domain PFY08_15170 PF04989 Cephalosporin hydroxylase PFY08_15175 PF10502 Signal peptidase, peptidase S26 PFY08_15180 PF00905 Penicillin binding protein transpeptidase domain PFY08_15180 PF03717 Penicillin-binding Protein dimerisation domain PFY08_15190 PF02146 Sir2 family PFY08_15195 PF01470 Pyroglutamyl peptidase PFY08_15210 PF03746 LamB/YcsF family PFY08_15215 PF02626 Carboxyltransferase domain, subdomain A and B PFY08_15220 PF02682 Carboxyltransferase domain, subdomain C and D PFY08_15225 PF09339 IclR helix-turn-helix domain PFY08_15225 PF01614 Bacterial transcriptional regulator PFY08_15230 PF10502 Signal peptidase, peptidase S26 PFY08_15235 PF03932 CutC family PFY08_15250 PF08028 Acyl-CoA dehydrogenase, C-terminal domain PFY08_15250 PF02770 Acyl-CoA dehydrogenase, middle domain PFY08_15250 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PFY08_15265 PF07670 Nucleoside recognition PFY08_15280 PF10903 Protein of unknown function (DUF2691) PFY08_15285 PF02915 Rubrerythrin PFY08_15300 PF00440 Bacterial regulatory proteins, tetR family PFY08_15305 PF05547 Immune inhibitor A peptidase M6 PFY08_15310 PF00391 PEP-utilising enzyme, mobile domain PFY08_15310 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain PFY08_15315 PF00753 Metallo-beta-lactamase superfamily PFY08_15320 PF10710 Protein of unknown function (DUF2512) PFY08_15325 PF11553 Protein of unknown function (DUF3231) PFY08_15330 PF00269 Small, acid-soluble spore proteins, alpha/beta type PFY08_15335 PF13823 Alcohol dehydrogenase GroES-associated PFY08_15335 PF08240 Alcohol dehydrogenase GroES-like domain PFY08_15335 PF00107 Zinc-binding dehydrogenase PFY08_15345 PF17763 Glutaminase/Asparaginase C-terminal domain PFY08_15345 PF00710 Asparaginase, N-terminal PFY08_15350 PF01381 Helix-turn-helix PFY08_15365 PF05504 Spore germination B3/ GerAC like, C-terminal PFY08_15370 PF03845 Spore germination protein PFY08_15375 PF03323 Bacillus/Clostridium GerA spore germination protein PFY08_15380 PF13426 PAS domain PFY08_15380 PF13188 PAS domain PFY08_15380 PF00989 PAS fold PFY08_15380 PF00512 His Kinase A (phospho-acceptor) domain PFY08_15380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PFY08_15390 PF05791 Bacillus haemolytic enterotoxin (HBL) PFY08_15395 PF05791 Bacillus haemolytic enterotoxin (HBL) PFY08_15410 PF17853 GGDEF-like domain PFY08_15410 PF12833 Helix-turn-helix domain PFY08_15425 PF01541 GIY-YIG catalytic domain PFY08_15425 PF12826 Helix-hairpin-helix motif PFY08_15425 PF02151 UvrB/uvrC motif PFY08_15425 PF08459 UvrC Helix-hairpin-helix N-terminal PFY08_15430 PF13520 Amino acid permease PFY08_15435 PF14748 Pyrroline-5-carboxylate reductase dimerisation PFY08_15435 PF03807 NADP oxidoreductase coenzyme F420-dependent PFY08_15440 PF05504 Spore germination B3/ GerAC like, C-terminal PFY08_15445 PF03845 Spore germination protein PFY08_15450 PF03323 Bacillus/Clostridium GerA spore germination protein PFY08_15455 PF08664 YcbB domain PFY08_15455 PF00072 Response regulator receiver domain PFY08_15465 PF04960 Glutaminase PFY08_15470 PF01235 Sodium:alanine symporter family PFY08_15480 PF00067 Cytochrome P450 PFY08_15500 PF00561 alpha/beta hydrolase fold PFY08_15505 PF00857 Isochorismatase family PFY08_15520 PF01979 Amidohydrolase family PFY08_15525 PF03466 LysR substrate binding domain PFY08_15525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PFY08_15530 PF01047 MarR family PFY08_15535 PF01544 CorA-like Mg2+ transporter protein PFY08_15555 PF12146 Serine aminopeptidase, S33 PFY08_15555 PF13026 Protein of unknown function (DUF3887) PFY08_15570 PF03073 TspO/MBR family PFY08_15575 PF00875 DNA photolyase PFY08_15575 PF03441 FAD binding domain of DNA photolyase PFY08_15595 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) PFY08_15600 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus PFY08_15600 PF00361 Proton-conducting membrane transporter PFY08_15605 PF10057 Uncharacterized conserved protein (DUF2294) PFY08_15615 PF05504 Spore germination B3/ GerAC like, C-terminal PFY08_15620 PF03323 Bacillus/Clostridium GerA spore germination protein PFY08_15625 PF01522 Polysaccharide deacetylase PFY08_15630 PF00583 Acetyltransferase (GNAT) family PFY08_15635 PF01040 UbiA prenyltransferase family PFY08_15645 PF12746 GNAT acetyltransferase PFY08_15650 PF01451 Low molecular weight phosphotyrosine protein phosphatase PFY08_15655 PF01758 Sodium Bile acid symporter family PFY08_15660 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily PFY08_15665 PF01022 Bacterial regulatory protein, arsR family PFY08_15675 PF01872 RibD C-terminal domain PFY08_15680 PF00550 Phosphopantetheine attachment site PFY08_15680 PF07993 Male sterility protein PFY08_15685 PF00440 Bacterial regulatory proteins, tetR family PFY08_15685 PF18665 Tetracyclin repressor-like, C-terminal domain PFY08_15695 PF01037 Lrp/AsnC ligand binding domain PFY08_15710 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily PFY08_15735 PF00440 Bacterial regulatory proteins, tetR family PFY08_15745 PF00144 Beta-lactamase PFY08_15750 PF00144 Beta-lactamase PFY08_15755 PF08803 Putative mono-oxygenase ydhR PFY08_15765 PF12802 MarR family PFY08_15800 PF00486 Transcriptional regulatory protein, C terminal PFY08_15800 PF00072 Response regulator receiver domain PFY08_15805 PF00672 HAMP domain PFY08_15805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PFY08_15805 PF00512 His Kinase A (phospho-acceptor) domain PFY08_15835 PF00196 Bacterial regulatory proteins, luxR family PFY08_15835 PF00072 Response regulator receiver domain PFY08_15855 PF07690 Major Facilitator Superfamily PFY08_15875 PF00291 Pyridoxal-phosphate dependent enzyme PFY08_15885 PF01139 tRNA-splicing ligase RtcB PFY08_15895 PF04072 Leucine carboxyl methyltransferase PFY08_15905 PF00005 ABC transporter PFY08_15910 PF02687 FtsX-like permease family PFY08_15930 PF00672 HAMP domain PFY08_15930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PFY08_15930 PF00512 His Kinase A (phospho-acceptor) domain PFY08_15935 PF00486 Transcriptional regulatory protein, C terminal PFY08_15935 PF00072 Response regulator receiver domain PFY08_15940 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 PFY08_15940 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) PFY08_15950 PF17676 LD-carboxypeptidase C-terminal domain PFY08_15950 PF02016 LD-carboxypeptidase N-terminal domain PFY08_15990 PF00082 Subtilase family PFY08_16000 PF03313 Serine dehydratase alpha chain PFY08_16005 PF03315 Serine dehydratase beta chain PFY08_16005 PF01842 ACT domain PFY08_16015 PF00202 Aminotransferase class-III PFY08_16020 PF00708 Acylphosphatase PFY08_16020 PF07503 HypF finger PFY08_16020 PF01300 Telomere recombination PFY08_16020 PF17788 HypF Kae1-like domain PFY08_16025 PF02769 AIR synthase related protein, C-terminal domain PFY08_16025 PF00586 AIR synthase related protein, N-terminal domain PFY08_16030 PF00857 Isochorismatase family PFY08_16035 PF01037 Lrp/AsnC ligand binding domain PFY08_16040 PF13520 Amino acid permease PFY08_16055 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PFY08_16055 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PFY08_16055 PF01842 ACT domain PFY08_16060 PF00266 Aminotransferase class-V PFY08_16075 PF07883 Cupin domain PFY08_16080 PF01497 Periplasmic binding protein PFY08_16080 PF12833 Helix-turn-helix domain PFY08_16085 PF01804 Penicillin amidase PFY08_16095 PF01471 Putative peptidoglycan binding domain PFY08_16095 PF01476 LysM domain PFY08_16095 PF01510 N-acetylmuramoyl-L-alanine amidase PFY08_16135 PF14411 A nuclease of the HNH/ENDO VII superfamily with conserved LHH PFY08_16135 PF04740 LXG domain of WXG superfamily PFY08_16185 PF02557 D-alanyl-D-alanine carboxypeptidase PFY08_16190 PF09587 Bacterial capsule synthesis protein PGA_cap PFY08_16195 PF14044 NETI protein PFY08_16200 PF07690 Major Facilitator Superfamily PFY08_16210 PF12697 Alpha/beta hydrolase family PFY08_16215 PF01047 MarR family PFY08_16220 PF07690 Major Facilitator Superfamily PFY08_16230 PF12679 ABC-2 family transporter protein PFY08_16235 PF13732 Domain of unknown function (DUF4162) PFY08_16235 PF00005 ABC transporter PFY08_16240 PF13396 Phospholipase_D-nuclease N-terminal PFY08_16255 PF02667 Short chain fatty acid transporter PFY08_16265 PF02525 Flavodoxin-like fold PFY08_16285 PF14256 YwiC-like protein PFY08_16295 PF00005 ABC transporter PFY08_16315 PF03737 Aldolase/RraA PFY08_16320 PF03606 C4-dicarboxylate anaerobic carrier PFY08_16325 PF04231 Endonuclease I PFY08_16340 PF04073 Aminoacyl-tRNA editing domain PFY08_16345 PF03129 Anticodon binding domain PFY08_16345 PF13393 Histidyl-tRNA synthetase PFY08_16360 PF01638 HxlR-like helix-turn-helix PFY08_16365 PF00881 Nitroreductase family PFY08_16375 PF02887 Pyruvate kinase, alpha/beta domain PFY08_16375 PF00391 PEP-utilising enzyme, mobile domain PFY08_16375 PF00224 Pyruvate kinase, barrel domain PFY08_16405 PF00005 ABC transporter PFY08_16430 PF13419 Haloacid dehalogenase-like hydrolase PFY08_16440 PF13350 Tyrosine phosphatase family PFY08_16460 PF13344 Haloacid dehalogenase-like hydrolase PFY08_16460 PF00293 NUDIX domain PFY08_16465 PF00579 tRNA synthetases class I (W and Y) PFY08_16470 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase PFY08_16470 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain PFY08_16470 PF13288 DXP reductoisomerase C-terminal domain PFY08_16475 PF01594 AI-2E family transporter PFY08_16510 PF07690 Major Facilitator Superfamily PFY08_16530 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) PFY08_16540 PF01595 Cyclin M transmembrane N-terminal domain PFY08_16540 PF03471 Transporter associated domain PFY08_16540 PF00571 CBS domain PFY08_16545 PF13411 MerR HTH family regulatory protein PFY08_16555 PF00483 Nucleotidyl transferase PFY08_16560 PF16363 GDP-mannose 4,6 dehydratase PFY08_16565 PF08421 Putative zinc binding domain PFY08_16565 PF08484 C-methyltransferase C-terminal domain PFY08_16570 PF01370 NAD dependent epimerase/dehydratase family PFY08_16585 PF00892 EamA-like transporter family PFY08_16595 PF00805 Pentapeptide repeats (8 copies) PFY08_16600 PF06906 Protein of unknown function (DUF1272) PFY08_16605 PF10282 Lactonase, 7-bladed beta-propeller PFY08_16610 PF02782 FGGY family of carbohydrate kinases, C-terminal domain PFY08_16610 PF00370 FGGY family of carbohydrate kinases, N-terminal domain PFY08_16615 PF02447 GntP family permease PFY08_16620 PF00923 Transaldolase/Fructose-6-phosphate aldolase PFY08_16625 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase PFY08_16625 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain PFY08_16630 PF00456 Transketolase, thiamine diphosphate binding domain PFY08_16630 PF02780 Transketolase, C-terminal domain PFY08_16630 PF02779 Transketolase, pyrimidine binding domain PFY08_16635 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain PFY08_16635 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain PFY08_16645 PF00107 Zinc-binding dehydrogenase PFY08_16645 PF08240 Alcohol dehydrogenase GroES-like domain PFY08_16650 PF00296 Luciferase-like monooxygenase PFY08_16655 PF00550 Phosphopantetheine attachment site PFY08_16655 PF08659 KR domain PFY08_16655 PF02801 Beta-ketoacyl synthase, C-terminal domain PFY08_16655 PF00109 Beta-ketoacyl synthase, N-terminal domain PFY08_16655 PF16197 Ketoacyl-synthetase C-terminal extension PFY08_16655 PF00107 Zinc-binding dehydrogenase PFY08_16655 PF08240 Alcohol dehydrogenase GroES-like domain PFY08_16655 PF14765 Polyketide synthase dehydratase PFY08_16655 PF00698 Acyl transferase domain PFY08_16660 PF00106 short chain dehydrogenase PFY08_16665 PF03413 Peptidase propeptide and YPEB domain PFY08_16665 PF02868 Thermolysin metallopeptidase, alpha-helical domain PFY08_16665 PF01447 Thermolysin metallopeptidase, catalytic domain PFY08_16665 PF07504 Fungalysin/Thermolysin Propeptide Motif PFY08_16675 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PFY08_16675 PF00672 HAMP domain PFY08_16675 PF12729 Four helix bundle sensory module for signal transduction PFY08_16680 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) PFY08_16685 PF01872 RibD C-terminal domain PFY08_16685 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region PFY08_16690 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase PFY08_16690 PF00925 GTP cyclohydrolase II PFY08_16695 PF01638 HxlR-like helix-turn-helix PFY08_16710 PF00248 Aldo/keto reductase family PFY08_16715 PF07690 Major Facilitator Superfamily PFY08_16725 PF03928 Haem-degrading PFY08_16770 PF03960 ArsC family PFY08_16775 PF01638 HxlR-like helix-turn-helix PFY08_16780 PF07702 UTRA domain PFY08_16780 PF00392 Bacterial regulatory proteins, gntR family PFY08_16785 PF01408 Oxidoreductase family, NAD-binding Rossmann fold PFY08_16785 PF02894 Oxidoreductase family, C-terminal alpha/beta domain PFY08_16795 PF01638 HxlR-like helix-turn-helix PFY08_16800 PF01638 HxlR-like helix-turn-helix PFY08_16805 PF00248 Aldo/keto reductase family PFY08_16845 PF02567 Phenazine biosynthesis-like protein PFY08_16855 PF00501 AMP-binding enzyme PFY08_16855 PF13193 AMP-binding enzyme C-terminal domain PFY08_16860 PF02525 Flavodoxin-like fold PFY08_16865 PF01638 HxlR-like helix-turn-helix PFY08_16875 PF01022 Bacterial regulatory protein, arsR family PFY08_16880 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain PFY08_16880 PF01522 Polysaccharide deacetylase PFY08_16885 PF12791 Anti-sigma factor N-terminus PFY08_16890 PF04542 Sigma-70 region 2 PFY08_16895 PF00535 Glycosyl transferase family 2 PFY08_16895 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 PFY08_16900 PF01810 LysE type translocator PFY08_16935 PF01061 ABC-2 type transporter PFY08_16940 PF13732 Domain of unknown function (DUF4162) PFY08_16940 PF00005 ABC transporter PFY08_16955 PF03063 Prismane/CO dehydrogenase family PFY08_16960 PF00753 Metallo-beta-lactamase superfamily PFY08_17010 PF00753 Metallo-beta-lactamase superfamily PFY08_17015 PF00324 Amino acid permease PFY08_17020 PF07690 Major Facilitator Superfamily PFY08_17045 PF02585 GlcNAc-PI de-N-acetylase PFY08_17050 PF08830 Protein of unknown function (DUF1806) PFY08_17055 PF03600 Citrate transporter PFY08_17070 PF01497 Periplasmic binding protein PFY08_17075 PF01032 FecCD transport family PFY08_17085 PF01609 Transposase DDE domain PFY08_17105 PF05675 Protein of unknown function (DUF817) PFY08_17110 PF13170 Protein of unknown function (DUF4003) PFY08_17125 PF10901 Protein of unknown function (DUF2690) PFY08_17135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PFY08_17135 PF03466 LysR substrate binding domain PFY08_17140 PF08240 Alcohol dehydrogenase GroES-like domain PFY08_17140 PF00107 Zinc-binding dehydrogenase PFY08_17155 PF00488 MutS domain V PFY08_17155 PF01713 Smr domain PFY08_17165 PF00128 Alpha amylase, catalytic domain PFY08_17165 PF09154 Domain of unknown function (DUF1939) PFY08_17170 PF00797 N-acetyltransferase PFY08_17175 PF01432 Peptidase family M3 PFY08_17175 PF08439 Oligopeptidase F PFY08_17180 PF00144 Beta-lactamase PFY08_17195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PFY08_17195 PF03466 LysR substrate binding domain PFY08_17205 PF03009 Glycerophosphoryl diester phosphodiesterase family PFY08_17210 PF01494 FAD binding domain PFY08_17215 PF01022 Bacterial regulatory protein, arsR family PFY08_17220 PF08240 Alcohol dehydrogenase GroES-like domain PFY08_17220 PF00107 Zinc-binding dehydrogenase PFY08_17225 PF02696 Uncharacterized ACR, YdiU/UPF0061 family PFY08_17230 PF18801 response regulator aspartate phosphatase H, N terminal PFY08_17230 PF17874 MalT-like TPR region PFY08_17260 PF01565 FAD binding domain PFY08_17260 PF02913 FAD linked oxidases, C-terminal domain PFY08_17285 PF01066 CDP-alcohol phosphatidyltransferase PFY08_17295 PF07992 Pyridine nucleotide-disulphide oxidoreductase PFY08_17305 PF00483 Nucleotidyl transferase PFY08_17315 PF01370 NAD dependent epimerase/dehydratase family PFY08_17320 PF16363 GDP-mannose 4,6 dehydratase PFY08_17325 PF18801 response regulator aspartate phosphatase H, N terminal PFY08_17335 PF00672 HAMP domain PFY08_17335 PF02743 Cache domain PFY08_17335 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PFY08_17355 PF00440 Bacterial regulatory proteins, tetR family PFY08_17360 PF07968 Leukocidin/Hemolysin toxin family PFY08_17365 PF00395 S-layer homology domain PFY08_17365 PF01520 N-acetylmuramoyl-L-alanine amidase PFY08_17390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PFY08_17390 PF00512 His Kinase A (phospho-acceptor) domain PFY08_17390 PF00989 PAS fold PFY08_17395 PF01752 Collagenase PFY08_17395 PF18496 Collagenase G catalytic helper subdomain PFY08_17395 PF08453 Peptidase family M9 N-terminal PFY08_17400 PF02308 MgtC family PFY08_17410 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily PFY08_17415 PF04294 VanW like protein PFY08_17425 PF13039 Protein of unknown function (DUF3900) PFY08_17425 PF13037 Domain of unknown function (DUF3898) PFY08_17440 PF00313 'Cold-shock' DNA-binding domain PFY08_17450 PF00258 Flavodoxin PFY08_17470 PF00132 Bacterial transferase hexapeptide (six repeats) PFY08_17480 PF00106 short chain dehydrogenase PFY08_17490 PF00206 Lyase PFY08_17490 PF14698 Argininosuccinate lyase C-terminal PFY08_17500 PF01156 Inosine-uridine preferring nucleoside hydrolase PFY08_17505 PF00474 Sodium:solute symporter family PFY08_17515 PF00171 Aldehyde dehydrogenase family PFY08_17525 PF14151 YfhD-like protein PFY08_17530 PF13243 Squalene-hopene cyclase C-terminal domain PFY08_17530 PF13249 Squalene-hopene cyclase N-terminal domain PFY08_17535 PF02681 Divergent PAP2 family PFY08_17540 PF00892 EamA-like transporter family PFY08_17545 PF06961 Protein of unknown function (DUF1294) PFY08_17560 PF10609 NUBPL iron-transfer P-loop NTPase PFY08_17570 PF02391 MoaE protein PFY08_17575 PF03453 MoeA N-terminal region (domain I and II) PFY08_17575 PF03454 MoeA C-terminal region (domain IV) PFY08_17575 PF00994 Probable molybdopterin binding domain PFY08_17580 PF00899 ThiF family PFY08_17585 PF01226 Formate/nitrite transporter PFY08_17590 PF06463 Molybdenum Cofactor Synthesis C PFY08_17590 PF04055 Radical SAM superfamily PFY08_17595 PF02634 FdhD/NarQ family PFY08_17600 PF10057 Uncharacterized conserved protein (DUF2294) PFY08_17605 PF07849 Protein of unknown function (DUF1641) PFY08_17610 PF00037 4Fe-4S binding domain PFY08_17610 PF00384 Molybdopterin oxidoreductase PFY08_17610 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region PFY08_17610 PF04879 Molybdopterin oxidoreductase Fe4S4 domain PFY08_17610 PF01568 Molydopterin dinucleotide binding domain PFY08_17615 PF03323 Bacillus/Clostridium GerA spore germination protein PFY08_17630 PF13520 Amino acid permease PFY08_17665 PF08241 Methyltransferase domain PFY08_17670 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PFY08_17675 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PFY08_17680 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PFY08_17685 PF03816 Cell envelope-related transcriptional attenuator domain PFY08_17695 PF04542 Sigma-70 region 2 PFY08_17695 PF08281 Sigma-70, region 4 PFY08_17705 PF00005 ABC transporter PFY08_17705 PF13732 Domain of unknown function (DUF4162) PFY08_17725 PF01408 Oxidoreductase family, NAD-binding Rossmann fold PFY08_17725 PF02894 Oxidoreductase family, C-terminal alpha/beta domain PFY08_17730 PF00521 DNA gyrase/topoisomerase IV, subunit A PFY08_17730 PF03989 DNA gyrase C-terminal domain, beta-propeller PFY08_17735 PF00204 DNA gyrase B PFY08_17735 PF00986 DNA gyrase B subunit, carboxyl terminus PFY08_17735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PFY08_17735 PF01751 Toprim domain PFY08_17740 PF13380 CoA binding domain PFY08_17745 PF13180 PDZ domain PFY08_17750 PF00072 Response regulator receiver domain PFY08_17750 PF00486 Transcriptional regulatory protein, C terminal PFY08_17755 PF04055 Radical SAM superfamily PFY08_17760 PF03477 ATP cone domain PFY08_17760 PF13597 Anaerobic ribonucleoside-triphosphate reductase PFY08_17765 PF02660 Glycerol-3-phosphate acyltransferase PFY08_17770 PF01521 Iron-sulphur cluster biosynthesis PFY08_17775 PF03061 Thioesterase superfamily PFY08_17780 PF01476 LysM domain PFY08_17780 PF00704 Glycosyl hydrolases family 18 PFY08_17790 PF08177 Small acid-soluble spore protein N family PFY08_17795 PF13040 Fur-regulated basic protein B PFY08_17800 PF17657 Bacterial DNA polymerase III alpha subunit finger domain PFY08_17800 PF07733 Bacterial DNA polymerase III alpha NTPase domain PFY08_17800 PF00929 Exonuclease PFY08_17800 PF01336 OB-fold nucleic acid binding domain PFY08_17800 PF11490 DNA polymerase III polC-type N-terminus II PFY08_17800 PF02811 PHP domain PFY08_17800 PF14579 Helix-hairpin-helix motif PFY08_17805 PF00578 AhpC/TSA family PFY08_17820 PF00664 ABC transporter transmembrane region PFY08_17820 PF00005 ABC transporter PFY08_17825 PF00330 Aconitase family (aconitate hydratase) PFY08_17825 PF00694 Aconitase C-terminal domain PFY08_17835 PF01522 Polysaccharide deacetylase PFY08_17845 PF08179 Small acid-soluble spore protein P family PFY08_17855 PF07690 Major Facilitator Superfamily PFY08_17865 PF02272 DHHA1 domain PFY08_17865 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain PFY08_17865 PF01411 tRNA synthetases class II (A) PFY08_17870 PF00293 NUDIX domain PFY08_17870 PF13344 Haloacid dehalogenase-like hydrolase PFY08_17880 PF02803 Thiolase, C-terminal domain PFY08_17880 PF00108 Thiolase, N-terminal domain PFY08_17885 PF00501 AMP-binding enzyme PFY08_17885 PF13193 AMP-binding enzyme C-terminal domain PFY08_17890 PF02632 BioY family PFY08_17895 PF00501 AMP-binding enzyme PFY08_17895 PF13193 AMP-binding enzyme C-terminal domain PFY08_17920 PF05532 CsbD-like PFY08_17940 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) PFY08_17940 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 PFY08_17950 PF00512 His Kinase A (phospho-acceptor) domain PFY08_17950 PF13426 PAS domain PFY08_17950 PF13188 PAS domain PFY08_17950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PFY08_17950 PF00989 PAS fold PFY08_17955 PF01738 Dienelactone hydrolase family PFY08_17960 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily PFY08_17965 PF00474 Sodium:solute symporter family PFY08_17970 PF01645 Conserved region in glutamate synthase PFY08_17975 PF00724 NADH:flavin oxidoreductase / NADH oxidase family PFY08_17980 PF02559 CarD-like/TRCF domain PFY08_17985 PF00491 Arginase family PFY08_17990 PF01979 Amidohydrolase family PFY08_17995 PF17392 Urocanase C-terminal domain PFY08_17995 PF01175 Urocanase Rossmann-like domain PFY08_17995 PF17391 Urocanase N-terminal domain PFY08_18000 PF00221 Aromatic amino acid lyase PFY08_18005 PF09021 HutP PFY08_18030 PF11084 Protein of unknown function (DUF2621) PFY08_18035 PF07301 Protein of unknown function (DUF1453) PFY08_18040 PF02683 Cytochrome C biogenesis protein transmembrane region PFY08_18050 PF01546 Peptidase family M20/M25/M40 PFY08_18050 PF07687 Peptidase dimerisation domain PFY08_18060 PF00005 ABC transporter PFY08_18075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PFY08_18075 PF03466 LysR substrate binding domain PFY08_18080 PF03788 LrgA family PFY08_18085 PF04172 LrgB-like family PFY08_18090 PF00293 NUDIX domain PFY08_18090 PF13344 Haloacid dehalogenase-like hydrolase PFY08_18100 PF01925 Sulfite exporter TauE/SafE PFY08_18120 PF01183 Glycosyl hydrolases family 25 PFY08_18120 PF08239 Bacterial SH3 domain PFY08_18125 PF00664 ABC transporter transmembrane region PFY08_18125 PF00005 ABC transporter PFY08_18130 PF00005 ABC transporter PFY08_18130 PF00664 ABC transporter transmembrane region PFY08_18135 PF03672 Uncharacterised protein family (UPF0154) PFY08_18140 PF10747 Sporulation inhibitor of replication protein SirA PFY08_18145 PF02779 Transketolase, pyrimidine binding domain PFY08_18145 PF02780 Transketolase, C-terminal domain PFY08_18145 PF00456 Transketolase, thiamine diphosphate binding domain PFY08_18150 PF00528 Binding-protein-dependent transport system inner membrane component PFY08_18155 PF00528 Binding-protein-dependent transport system inner membrane component PFY08_18160 PF00005 ABC transporter PFY08_18165 PF00497 Bacterial extracellular solute-binding proteins, family 3 PFY08_18170 PF00149 Calcineurin-like phosphoesterase PFY08_18170 PF02872 5'-nucleotidase, C-terminal domain PFY08_18175 PF05979 Bacterial protein of unknown function (DUF896) PFY08_18180 PF00239 Resolvase, N terminal domain PFY08_18185 PF01726 LexA DNA binding domain PFY08_18185 PF00717 Peptidase S24-like PFY08_18200 PF03551 Transcriptional regulator PadR-like family PFY08_18205 PF03951 Glutamine synthetase, beta-Grasp domain PFY08_18205 PF00120 Glutamine synthetase, catalytic domain PFY08_18210 PF13411 MerR HTH family regulatory protein PFY08_18215 PF06838 Methionine gamma-lyase PFY08_18220 PF13167 GTP-binding GTPase N-terminal PFY08_18220 PF01926 50S ribosome-binding GTPase PFY08_18220 PF16360 GTP-binding GTPase Middle Region PFY08_18225 PF03458 UPF0126 domain PFY08_18235 PF00004 ATPase family associated with various cellular activities (AAA) PFY08_18235 PF17866 AAA lid domain PFY08_18255 PF17209 Hfq protein PFY08_18270 PF06725 3D domain PFY08_18270 PF01476 LysM domain PFY08_18275 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 PFY08_18275 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit PFY08_18280 PF00294 pfkB family carbohydrate kinase PFY08_18285 PF08220 DeoR-like helix-turn-helix domain PFY08_18285 PF00455 DeoR C terminal sensor domain PFY08_18290 PF00465 Iron-containing alcohol dehydrogenase PFY08_18295 PF04238 Protein of unknown function (DUF420) PFY08_18305 PF00324 Amino acid permease PFY08_18310 PF00041 Fibronectin type III domain PFY08_18310 PF00704 Glycosyl hydrolases family 18 PFY08_18315 PF10518 TAT (twin-arginine translocation) pathway signal sequence PFY08_18315 PF00149 Calcineurin-like phosphoesterase PFY08_18320 PF01226 Formate/nitrite transporter PFY08_18325 PF00216 Bacterial DNA-binding protein PFY08_18335 PF00403 Heavy-metal-associated domain PFY08_18340 PF00403 Heavy-metal-associated domain PFY08_18345 PF02583 Metal-sensitive transcriptional repressor PFY08_18355 PF00756 Putative esterase PFY08_18360 PF00005 ABC transporter PFY08_18365 PF01032 FecCD transport family PFY08_18370 PF01032 FecCD transport family PFY08_18375 PF01497 Periplasmic binding protein PFY08_18380 PF03372 Endonuclease/Exonuclease/phosphatase family PFY08_18385 PF12833 Helix-turn-helix domain PFY08_18385 PF02805 Metal binding domain of Ada PFY08_18390 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain PFY08_18390 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain PFY08_18395 PF00730 HhH-GPD superfamily base excision DNA repair protein PFY08_18395 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain PFY08_18400 PF01546 Peptidase family M20/M25/M40 PFY08_18400 PF07687 Peptidase dimerisation domain PFY08_18415 PF00561 alpha/beta hydrolase fold PFY08_18420 PF00990 Diguanylate cyclase, GGDEF domain PFY08_18420 PF00563 EAL domain PFY08_18420 PF03707 Bacterial signalling protein N terminal repeat PFY08_18425 PF04101 Glycosyltransferase family 28 C-terminal domain PFY08_18425 PF03033 Glycosyltransferase family 28 N-terminal domain PFY08_18435 PF16363 GDP-mannose 4,6 dehydratase PFY08_18440 PF02719 Polysaccharide biosynthesis protein PFY08_18440 PF08485 Polysaccharide biosynthesis protein C-terminal PFY08_18455 PF10787 Uncharacterised protein from bacillus cereus group PFY08_18460 PF04172 LrgB-like family PFY08_18465 PF03788 LrgA family PFY08_18470 PF00155 Aminotransferase class I and II PFY08_18470 PF00392 Bacterial regulatory proteins, gntR family PFY08_18480 PF00392 Bacterial regulatory proteins, gntR family PFY08_18480 PF07702 UTRA domain PFY08_18485 PF00232 Glycosyl hydrolase family 1 PFY08_18490 PF00388 Phosphatidylinositol-specific phospholipase C, X domain PFY08_18495 PF00082 Subtilase family PFY08_18500 PF07486 Cell Wall Hydrolase PFY08_18510 PF00884 Sulfatase PFY08_18515 PF00350 Dynamin family PFY08_18525 PF08676 MutL C terminal dimerisation domain PFY08_18525 PF01119 DNA mismatch repair protein, C-terminal domain PFY08_18530 PF05190 MutS family domain IV PFY08_18530 PF00488 MutS domain V PFY08_18530 PF05188 MutS domain II PFY08_18530 PF05192 MutS domain III PFY08_18530 PF01624 MutS domain I PFY08_18535 PF10628 Outer spore coat protein E (CotE) PFY08_18540 PF06133 Control of competence regulator ComK, YlbF/YmcA PFY08_18545 PF00919 Uncharacterized protein family UPF0004 PFY08_18545 PF01938 TRAM domain PFY08_18545 PF04055 Radical SAM superfamily PFY08_18550 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PFY08_18555 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II PFY08_18555 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase PFY08_18555 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg PFY08_18560 PF01244 Membrane dipeptidase (Peptidase family M19) PFY08_18565 PF04232 Stage V sporulation protein S (SpoVS) PFY08_18570 PF13277 YmdB-like protein PFY08_18575 PF01966 HD domain PFY08_18575 PF00013 KH domain PFY08_18575 PF12072 Domain of unknown function (DUF3552) PFY08_18580 PF00154 recA bacterial DNA recombination protein PFY08_18585 PF02464 Competence-damaged protein PFY08_18585 PF18146 Damage-inducible protein CinA KH domain PFY08_18585 PF00994 Probable molybdopterin binding domain PFY08_18590 PF01066 CDP-alcohol phosphatidyltransferase PFY08_18595 PF13464 Domain of unknown function (DUF4115) PFY08_18600 PF11868 Protein of unknown function (DUF3388) PFY08_18605 PF11588 Protein of unknown function (DUF3243) PFY08_18615 PF05193 Peptidase M16 inactive domain PFY08_18615 PF00675 Insulinase (Peptidase family M16) PFY08_18620 PF05193 Peptidase M16 inactive domain PFY08_18625 PF02653 Branched-chain amino acid transport system / permease component PFY08_18630 PF02653 Branched-chain amino acid transport system / permease component PFY08_18635 PF00005 ABC transporter PFY08_18640 PF02608 ABC transporter substrate-binding protein PnrA-like PFY08_18645 PF00392 Bacterial regulatory proteins, gntR family PFY08_18645 PF07702 UTRA domain PFY08_18650 PF17854 FtsK alpha domain PFY08_18650 PF01580 FtsK/SpoIIIE family PFY08_18650 PF09397 Ftsk gamma domain PFY08_18655 PF14035 YlzJ-like protein PFY08_18660 PF00574 Clp protease PFY08_18665 PF00753 Metallo-beta-lactamase superfamily PFY08_18665 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain PFY08_18665 PF17770 Ribonuclease J C-terminal domain PFY08_18670 PF00701 Dihydrodipicolinate synthetase family PFY08_18675 PF00696 Amino acid kinase family PFY08_18675 PF13840 ACT domain PFY08_18680 PF01118 Semialdehyde dehydrogenase, NAD binding domain PFY08_18680 PF02774 Semialdehyde dehydrogenase, dimerisation domain PFY08_18685 PF02441 Flavoprotein PFY08_18690 PF01262 Alanine dehydrogenase/PNT, C-terminal domain PFY08_18690 PF16924 Dipicolinate synthase subunit A N-terminal domain PFY08_18695 PF05239 PRC-barrel domain PFY08_18700 PF00675 Insulinase (Peptidase family M16) PFY08_18700 PF05193 Peptidase M16 inactive domain PFY08_18705 PF01522 Polysaccharide deacetylase PFY08_18710 PF00575 S1 RNA binding domain PFY08_18710 PF03725 3' exoribonuclease family, domain 2 PFY08_18710 PF01138 3' exoribonuclease family, domain 1 PFY08_18710 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain PFY08_18710 PF00013 KH domain PFY08_18715 PF00312 Ribosomal protein S15 PFY08_18720 PF06574 FAD synthetase PFY08_18720 PF01687 Riboflavin kinase PFY08_18725 PF16198 tRNA pseudouridylate synthase B C-terminal domain PFY08_18725 PF01509 TruB family pseudouridylate synthase (N terminal domain) PFY08_18730 PF02033 Ribosome-binding factor A PFY08_18735 PF04456 Protein of unknown function (DUF503) PFY08_18740 PF00009 Elongation factor Tu GTP binding domain PFY08_18740 PF11987 Translation-initiation factor 2 PFY08_18740 PF04760 Translation initiation factor IF-2, N-terminal region PFY08_18745 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family PFY08_18750 PF04296 Protein of unknown function (DUF448) PFY08_18755 PF13184 NusA-like KH domain PFY08_18755 PF08529 NusA N-terminal domain PFY08_18755 PF00575 S1 RNA binding domain PFY08_18760 PF02576 RimP N-terminal domain PFY08_18760 PF17384 RimP C-terminal SH3 domain PFY08_18765 PF00929 Exonuclease PFY08_18765 PF07733 Bacterial DNA polymerase III alpha NTPase domain PFY08_18765 PF11490 DNA polymerase III polC-type N-terminus II PFY08_18765 PF17657 Bacterial DNA polymerase III alpha subunit finger domain PFY08_18765 PF14579 Helix-hairpin-helix motif PFY08_18765 PF14480 DNA polymerase III polC-type N-terminus I PFY08_18765 PF02811 PHP domain PFY08_18770 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) PFY08_18770 PF03129 Anticodon binding domain PFY08_18770 PF04073 Aminoacyl-tRNA editing domain PFY08_18775 PF17820 PDZ domain PFY08_18775 PF02163 Peptidase family M50 PFY08_18780 PF13288 DXP reductoisomerase C-terminal domain PFY08_18780 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase PFY08_18780 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain PFY08_18790 PF01255 Putative undecaprenyl diphosphate synthase PFY08_18795 PF01765 Ribosome recycling factor PFY08_18800 PF00696 Amino acid kinase family PFY08_18805 PF00889 Elongation factor TS PFY08_18810 PF00318 Ribosomal protein S2 PFY08_18815 PF06018 CodY GAF-like domain PFY08_18815 PF08222 CodY helix-turn-helix domain PFY08_18825 PF00227 Proteasome subunit PFY08_18830 PF02899 Phage integrase, N-terminal SAM-like domain PFY08_18830 PF00589 Phage integrase family PFY08_18835 PF01134 Glucose inhibited division protein A PFY08_18840 PF01131 DNA topoisomerase PFY08_18840 PF01396 Topoisomerase DNA binding C4 zinc finger PFY08_18840 PF01751 Toprim domain PFY08_18845 PF02481 DNA recombination-mediator protein A PFY08_18850 PF00549 CoA-ligase PFY08_18850 PF02629 CoA binding domain PFY08_18855 PF00549 CoA-ligase PFY08_18855 PF08442 ATP-grasp domain PFY08_18860 PF01351 Ribonuclease HII PFY08_18865 PF01926 50S ribosome-binding GTPase PFY08_18870 PF10502 Signal peptidase, peptidase S26 PFY08_18875 PF01245 Ribosomal protein L19 PFY08_18880 PF01746 tRNA (Guanine-1)-methyltransferase PFY08_18885 PF01782 RimM N-terminal domain PFY08_18885 PF05239 PRC-barrel domain PFY08_18895 PF00886 Ribosomal protein S16 PFY08_18900 PF02881 SRP54-type protein, helical bundle domain PFY08_18900 PF02978 Signal peptide binding domain PFY08_18900 PF00448 SRP54-type protein, GTPase domain PFY08_18905 PF04297 Putative helix-turn-helix protein, YlxM / p13 like PFY08_18910 PF00448 SRP54-type protein, GTPase domain PFY08_18910 PF02881 SRP54-type protein, helical bundle domain PFY08_18915 PF06470 SMC proteins Flexible Hinge Domain PFY08_18915 PF02463 RecF/RecN/SMC N terminal domain PFY08_18920 PF00035 Double-stranded RNA binding motif PFY08_18920 PF14622 Ribonuclease-III-like PFY08_18925 PF00550 Phosphopantetheine attachment site PFY08_18935 PF00698 Acyl transferase domain PFY08_18940 PF02504 Fatty acid synthesis protein PFY08_18945 PF03061 Thioesterase superfamily PFY08_18950 PF00270 DEAD/DEAH box helicase PFY08_18950 PF00271 Helicase conserved C-terminal domain PFY08_18950 PF17191 RecG wedge domain PFY08_18955 PF13684 Dihydroxyacetone kinase family PFY08_18955 PF02734 DAK2 domain PFY08_18960 PF03780 Asp23 family, cell envelope-related function PFY08_18965 PF00830 Ribosomal L28 family PFY08_18970 PF08183 Stage V sporulation protein family PFY08_18975 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain PFY08_18975 PF04263 Thiamin pyrophosphokinase, catalytic domain PFY08_18980 PF00834 Ribulose-phosphate 3 epimerase family PFY08_18985 PF03193 RsgA GTPase PFY08_18985 PF16745 RsgA N-terminal domain PFY08_18990 PF03793 PASTA domain PFY08_18990 PF00069 Protein kinase domain PFY08_19000 PF04055 Radical SAM superfamily PFY08_19005 PF01189 16S rRNA methyltransferase RsmB/F PFY08_19005 PF01029 NusB family PFY08_19010 PF00551 Formyl transferase PFY08_19010 PF02911 Formyl transferase, C-terminal domain PFY08_19015 PF01327 Polypeptide deformylase PFY08_19020 PF00271 Helicase conserved C-terminal domain PFY08_19020 PF04851 Type III restriction enzyme, res subunit PFY08_19020 PF17764 3′ DNA-binding domain (3′BD) PFY08_19020 PF18319 PriA DNA helicase Cys-rich region (CRR) domain PFY08_19020 PF18074 Primosomal protein N C-terminal domain PFY08_19025 PF04127 DNA / pantothenate metabolism flavoprotein PFY08_19025 PF02441 Flavoprotein PFY08_19030 PF01192 RNA polymerase Rpb6 PFY08_19035 PF00625 Guanylate kinase PFY08_19040 PF04025 Domain of unknown function (DUF370) PFY08_19045 PF08340 Domain of unknown function (DUF1732) PFY08_19045 PF03755 YicC-like family, N-terminal region PFY08_19050 PF00689 Cation transporting ATPase, C-terminus PFY08_19050 PF00690 Cation transporter/ATPase, N-terminus PFY08_19055 PF05670 NFACT protein RNA binding domain PFY08_19060 PF00557 Metallopeptidase family M24 PFY08_19060 PF01321 Creatinase/Prolidase N-terminal domain PFY08_19085 PF00156 Phosphoribosyl transferase domain PFY08_19090 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family PFY08_19095 PF01180 Dihydroorotate dehydrogenase PFY08_19100 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B PFY08_19105 PF02142 MGS-like domain PFY08_19105 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain PFY08_19105 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain PFY08_19110 PF00117 Glutamine amidotransferase class-I PFY08_19110 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain PFY08_19115 PF01979 Amidohydrolase family PFY08_19120 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain PFY08_19120 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain PFY08_19125 PF00860 Permease family PFY08_19130 PF00156 Phosphoribosyl transferase domain PFY08_19135 PF01479 S4 domain PFY08_19135 PF00849 RNA pseudouridylate synthase PFY08_19140 PF01252 Signal peptidase (SPase) II PFY08_19150 PF00133 tRNA synthetases class I (I, L, M and V) PFY08_19150 PF06827 Zinc finger found in FPG and IleRS PFY08_19150 PF08264 Anticodon-binding domain of tRNA PFY08_19155 PF05103 DivIVA protein PFY08_19160 PF01479 S4 domain PFY08_19160 PF17774 Putative RNA-binding domain in YlmH PFY08_19165 PF02325 YGGT family PFY08_19170 PF04472 Cell division protein SepF PFY08_19175 PF01168 Alanine racemase, N-terminal domain PFY08_19180 PF02578 Multi-copper polyphenol oxidoreductase laccase PFY08_19185 PF05239 PRC-barrel domain PFY08_19190 PF04539 Sigma-70 region 3 PFY08_19190 PF04542 Sigma-70 region 2 PFY08_19190 PF04545 Sigma-70, region 4 PFY08_19195 PF04542 Sigma-70 region 2 PFY08_19195 PF04545 Sigma-70, region 4 PFY08_19200 PF03419 Sporulation factor SpoIIGA PFY08_19205 PF12327 FtsZ family, C-terminal domain PFY08_19205 PF00091 Tubulin/FtsZ family, GTPase domain PFY08_19210 PF02491 SHS2 domain inserted in FTSA PFY08_19215 PF03799 Cell division protein FtsQ PFY08_19215 PF08478 POTRA domain, FtsQ-type PFY08_19220 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain PFY08_19220 PF01565 FAD binding domain PFY08_19225 PF03033 Glycosyltransferase family 28 N-terminal domain PFY08_19225 PF04101 Glycosyltransferase family 28 C-terminal domain PFY08_19230 PF01098 Cell cycle protein PFY08_19235 PF08245 Mur ligase middle domain PFY08_19235 PF02875 Mur ligase family, glutamate ligase domain PFY08_19240 PF00953 Glycosyl transferase family 4 PFY08_19240 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 PFY08_19245 PF01225 Mur ligase family, catalytic domain PFY08_19245 PF08245 Mur ligase middle domain PFY08_19245 PF02875 Mur ligase family, glutamate ligase domain PFY08_19250 PF03793 PASTA domain PFY08_19250 PF03717 Penicillin-binding Protein dimerisation domain PFY08_19250 PF00905 Penicillin binding protein transpeptidase domain PFY08_19255 PF00905 Penicillin binding protein transpeptidase domain PFY08_19255 PF03793 PASTA domain PFY08_19255 PF03717 Penicillin-binding Protein dimerisation domain PFY08_19260 PF04977 Septum formation initiator PFY08_19265 PF01795 MraW methylase family PFY08_19270 PF10079 Bacillithiol biosynthesis BshC PFY08_19275 PF02558 Ketopantoate reductase PanE/ApbA PFY08_19275 PF08546 Ketopantoate reductase PanE/ApbA C terminal PFY08_19280 PF00583 Acetyltransferase (GNAT) family PFY08_19290 PF01783 Ribosomal L32p protein family PFY08_19295 PF02620 Large ribosomal RNA subunit accumulation protein YceD PFY08_19300 PF05636 HIGH Nucleotidyl Transferase PFY08_19305 PF13180 PDZ domain PFY08_19305 PF05362 Lon protease (S16) C-terminal proteolytic domain PFY08_19310 PF01734 Patatin-like phospholipase PFY08_19315 PF07670 Nucleoside recognition PFY08_19320 PF01467 Cytidylyltransferase-like PFY08_19335 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) PFY08_19340 PF06133 Control of competence regulator ComK, YlbF/YmcA PFY08_19345 PF00300 Histidine phosphatase superfamily (branch 1) PFY08_19350 PF14003 YlbE-like protein PFY08_19355 PF14071 Putative coat protein PFY08_19360 PF00188 Cysteine-rich secretory protein family PFY08_19360 PF14504 CAP-associated N-terminal PFY08_19365 PF08868 YugN-like family PFY08_19370 PF00795 Carbon-nitrogen hydrolase PFY08_19375 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) PFY08_19380 PF03626 Prokaryotic Cytochrome C oxidase subunit IV PFY08_19385 PF00510 Cytochrome c oxidase subunit III PFY08_19390 PF00115 Cytochrome C and Quinol oxidase polypeptide I PFY08_19395 PF02790 Cytochrome C oxidase subunit II, transmembrane domain PFY08_19395 PF00116 Cytochrome C oxidase subunit II, periplasmic domain PFY08_19395 PF00034 Cytochrome c PFY08_19400 PF01040 UbiA prenyltransferase family PFY08_19405 PF02628 Cytochrome oxidase assembly protein PFY08_19410 PF00682 HMGL-like PFY08_19410 PF02785 Biotin carboxylase C-terminal domain PFY08_19410 PF00289 Biotin carboxylase, N-terminal domain PFY08_19410 PF00364 Biotin-requiring enzyme PFY08_19410 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain PFY08_19410 PF02436 Conserved carboxylase domain PFY08_19415 PF01098 Cell cycle protein PFY08_19420 PF07408 Protein of unknown function (DUF1507) PFY08_19430 PF02562 PhoH-like protein PFY08_19430 PF13638 PIN domain PFY08_19440 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) PFY08_19450 PF14036 YlaH-like protein PFY08_19455 PF03144 Elongation factor Tu domain 2 PFY08_19455 PF00009 Elongation factor Tu GTP binding domain PFY08_19455 PF14492 Elongation Factor G, domain II PFY08_19455 PF00679 Elongation factor G C-terminus PFY08_19465 PF00459 Inositol monophosphatase family PFY08_19475 PF06335 Protein of unknown function (DUF1054) PFY08_19480 PF05256 Uncharacterised protein family (UPF0223) PFY08_19485 PF01276 Orn/Lys/Arg decarboxylase, major domain PFY08_19485 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain PFY08_19525 PF07992 Pyridine nucleotide-disulphide oxidoreductase PFY08_19525 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain PFY08_19530 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) PFY08_19530 PF00364 Biotin-requiring enzyme PFY08_19530 PF02817 e3 binding domain PFY08_19535 PF02779 Transketolase, pyrimidine binding domain PFY08_19535 PF02780 Transketolase, C-terminal domain PFY08_19540 PF00676 Dehydrogenase E1 component PFY08_19550 PF01327 Polypeptide deformylase PFY08_19560 PF07288 Protein of unknown function (DUF1447) PFY08_19565 PF17770 Ribonuclease J C-terminal domain PFY08_19565 PF00753 Metallo-beta-lactamase superfamily PFY08_19565 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain PFY08_19570 PF02080 TrkA-C domain PFY08_19570 PF02254 TrkA-N domain PFY08_19580 PF07687 Peptidase dimerisation domain PFY08_19580 PF01546 Peptidase family M20/M25/M40 PFY08_19585 PF00132 Bacterial transferase hexapeptide (six repeats) PFY08_19585 PF14602 Hexapeptide repeat of succinyl-transferase PFY08_19585 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal PFY08_19590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PFY08_19590 PF03466 LysR substrate binding domain PFY08_19605 PF04308 Ribonuclease H-like PFY08_19615 PF08796 Protein of unknown function (DUF1797) PFY08_19630 PF00563 EAL domain PFY08_19630 PF10388 EAL-domain associated signalling protein domain PFY08_19640 PF00149 Calcineurin-like phosphoesterase PFY08_19640 PF10518 TAT (twin-arginine translocation) pathway signal sequence PFY08_19650 PF02503 Polyphosphate kinase middle domain PFY08_19650 PF13090 Polyphosphate kinase C-terminal domain 2 PFY08_19650 PF17941 Polyphosphate kinase C-terminal domain 1 PFY08_19650 PF13089 Polyphosphate kinase N-terminal domain PFY08_19655 PF02541 Ppx/GppA phosphatase family PFY08_19660 PF14177 YkyB-like protein PFY08_19685 PF07690 Major Facilitator Superfamily PFY08_19695 PF01717 Cobalamin-independent synthase, Catalytic domain PFY08_19695 PF08267 Cobalamin-independent synthase, N-terminal domain PFY08_19705 PF14040 Deoxyribonuclease NucA/NucB PFY08_19715 PF00512 His Kinase A (phospho-acceptor) domain PFY08_19715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PFY08_19725 PF00155 Aminotransferase class I and II PFY08_19730 PF00356 Bacterial regulatory proteins, lacI family PFY08_19730 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family PFY08_19735 PF00528 Binding-protein-dependent transport system inner membrane component PFY08_19740 PF00528 Binding-protein-dependent transport system inner membrane component PFY08_19745 PF13416 Bacterial extracellular solute-binding protein PFY08_19750 PF00128 Alpha amylase, catalytic domain PFY08_19750 PF16657 Maltogenic Amylase, C-terminal domain PFY08_19750 PF02903 Alpha amylase, N-terminal ig-like domain PFY08_19755 PF16657 Maltogenic Amylase, C-terminal domain PFY08_19755 PF00128 Alpha amylase, catalytic domain PFY08_19760 PF00005 ABC transporter PFY08_19760 PF17912 MalK OB fold domain PFY08_19760 PF03459 TOBE domain PFY08_19800 PF02803 Thiolase, C-terminal domain PFY08_19800 PF00108 Thiolase, N-terminal domain PFY08_19805 PF00293 NUDIX domain PFY08_19835 PF03551 Transcriptional regulator PadR-like family PFY08_19850 PF01008 Initiation factor 2 subunit family PFY08_19855 PF01636 Phosphotransferase enzyme family PFY08_19860 PF00795 Carbon-nitrogen hydrolase PFY08_19865 PF00155 Aminotransferase class I and II PFY08_19870 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain PFY08_19870 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain PFY08_19880 PF00596 Class II Aldolase and Adducin N-terminal domain PFY08_19885 PF03079 ARD/ARD' family PFY08_19900 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase PFY08_19900 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase PFY08_19905 PF00144 Beta-lactamase PFY08_19910 PF08448 PAS fold PFY08_19910 PF00990 Diguanylate cyclase, GGDEF domain PFY08_19915 PF00881 Nitroreductase family PFY08_19930 PF05524 PEP-utilising enzyme, N-terminal PFY08_19930 PF00391 PEP-utilising enzyme, mobile domain PFY08_19930 PF02896 PEP-utilising enzyme, TIM barrel domain PFY08_19935 PF00381 PTS HPr component phosphorylation site PFY08_19940 PF02378 Phosphotransferase system, EIIC PFY08_19940 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 PFY08_19940 PF00367 phosphotransferase system, EIIB PFY08_19945 PF03123 CAT RNA binding domain PFY08_19945 PF00874 PRD domain PFY08_19955 PF00392 Bacterial regulatory proteins, gntR family PFY08_19955 PF07702 UTRA domain PFY08_19960 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase PFY08_19965 PF01979 Amidohydrolase family PFY08_19975 PF04079 Segregation and condensation complex subunit ScpB PFY08_19980 PF02616 Segregation and condensation protein ScpA PFY08_19990 PF03745 Domain of unknown function (DUF309) PFY08_19995 PF00583 Acetyltransferase (GNAT) family PFY08_20000 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD PFY08_20005 PF06207 Protein of unknown function (DUF1002) PFY08_20015 PF03323 Bacillus/Clostridium GerA spore germination protein PFY08_20020 PF14097 Stage V sporulation protein AE1 PFY08_20025 PF03862 SpoVAC/SpoVAEB sporulation membrane protein PFY08_20030 PF07451 Stage V sporulation protein AD (SpoVAD) PFY08_20035 PF03862 SpoVAC/SpoVAEB sporulation membrane protein PFY08_20040 PF13782 Stage V sporulation protein AB PFY08_20045 PF12164 Stage V sporulation protein AA PFY08_20055 PF00209 Sodium:neurotransmitter symporter family PFY08_20060 PF04542 Sigma-70 region 2 PFY08_20060 PF04545 Sigma-70, region 4 PFY08_20060 PF04539 Sigma-70 region 3 PFY08_20065 PF13581 Histidine kinase-like ATPase domain PFY08_20070 PF01740 STAS domain PFY08_20075 PF07943 Penicillin-binding protein 5, C-terminal domain PFY08_20075 PF00768 D-alanyl-D-alanine carboxypeptidase PFY08_20080 PF00392 Bacterial regulatory proteins, gntR family PFY08_20085 PF00005 ABC transporter PFY08_20105 PF01047 MarR family PFY08_20115 PF00860 Permease family PFY08_20120 PF01544 CorA-like Mg2+ transporter protein PFY08_20125 PF02885 Glycosyl transferase family, helical bundle domain PFY08_20125 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain PFY08_20125 PF00591 Glycosyl transferase family, a/b domain PFY08_20130 PF01048 Phosphorylase superfamily PFY08_20135 PF01676 Metalloenzyme superfamily PFY08_20140 PF13115 YtkA-like PFY08_20145 PF02899 Phage integrase, N-terminal SAM-like domain PFY08_20145 PF00589 Phage integrase family PFY08_20150 PF14004 Protein of unknown function (DUF4227) PFY08_20155 PF01475 Ferric uptake regulator family PFY08_20160 PF01944 Stage II sporulation protein M PFY08_20170 PF00293 NUDIX domain PFY08_20175 PF13072 Mother cell inhibitor of FtsZ PFY08_20180 PF00248 Aldo/keto reductase family PFY08_20185 PF00248 Aldo/keto reductase family PFY08_20190 PF13673 Acetyltransferase (GNAT) domain PFY08_20190 PF04229 GrpB protein PFY08_20200 PF02872 5'-nucleotidase, C-terminal domain PFY08_20200 PF00746 LPXTG cell wall anchor motif PFY08_20200 PF00149 Calcineurin-like phosphoesterase PFY08_20200 PF00565 Staphylococcal nuclease homologue PFY08_20210 PF12146 Serine aminopeptidase, S33 PFY08_20215 PF03553 Na+/H+ antiporter family PFY08_20215 PF13726 Na+-H+ antiporter family PFY08_20220 PF00356 Bacterial regulatory proteins, lacI family PFY08_20225 PF00583 Acetyltransferase (GNAT) family PFY08_20230 PF12146 Serine aminopeptidase, S33 PFY08_20235 PF10827 Protein of unknown function (DUF2552) PFY08_20245 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region PFY08_20245 PF01872 RibD C-terminal domain PFY08_20250 PF00677 Lumazine binding domain PFY08_20255 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase PFY08_20255 PF00925 GTP cyclohydrolase II PFY08_20260 PF00885 6,7-dimethyl-8-ribityllumazine synthase PFY08_20270 PF04055 Radical SAM superfamily PFY08_20270 PF06968 Biotin and Thiamin Synthesis associated domain PFY08_20275 PF13847 Methyltransferase domain PFY08_20280 PF12697 Alpha/beta hydrolase family PFY08_20280 PF08241 Methyltransferase domain PFY08_20285 PF00155 Aminotransferase class I and II PFY08_20295 PF00202 Aminotransferase class-III PFY08_20305 PF03553 Na+/H+ antiporter family PFY08_20310 PF02872 5'-nucleotidase, C-terminal domain PFY08_20310 PF00149 Calcineurin-like phosphoesterase PFY08_20320 PF01037 Lrp/AsnC ligand binding domain PFY08_20320 PF13404 AsnC-type helix-turn-helix domain PFY08_20335 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain PFY08_20335 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain PFY08_20340 PF00202 Aminotransferase class-III PFY08_20345 PF00696 Amino acid kinase family PFY08_20350 PF01960 ArgJ family PFY08_20355 PF02774 Semialdehyde dehydrogenase, dimerisation domain PFY08_20355 PF01118 Semialdehyde dehydrogenase, NAD binding domain PFY08_20365 PF00106 short chain dehydrogenase PFY08_20370 PF00753 Metallo-beta-lactamase superfamily PFY08_20375 PF03807 NADP oxidoreductase coenzyme F420-dependent PFY08_20375 PF14748 Pyrroline-5-carboxylate reductase dimerisation PFY08_20380 PF03313 Serine dehydratase alpha chain PFY08_20385 PF03315 Serine dehydratase beta chain PFY08_20385 PF01842 ACT domain PFY08_20395 PF00753 Metallo-beta-lactamase superfamily PFY08_20395 PF12706 Beta-lactamase superfamily domain PFY08_20410 PF00689 Cation transporting ATPase, C-terminus PFY08_20410 PF00690 Cation transporter/ATPase, N-terminus PFY08_20415 PF02308 MgtC family PFY08_20420 PF11799 impB/mucB/samB family C-terminal domain PFY08_20420 PF00817 impB/mucB/samB family PFY08_20420 PF11798 IMS family HHH motif PFY08_20425 PF01546 Peptidase family M20/M25/M40 PFY08_20425 PF07687 Peptidase dimerisation domain PFY08_20430 PF13302 Acetyltransferase (GNAT) domain PFY08_20445 PF03734 L,D-transpeptidase catalytic domain PFY08_20450 PF11728 Putative aromatic acid exporter C-terminal domain PFY08_20450 PF06081 Aromatic acid exporter family member 1 PFY08_20455 PF00005 ABC transporter PFY08_20460 PF00528 Binding-protein-dependent transport system inner membrane component PFY08_20465 PF00497 Bacterial extracellular solute-binding proteins, family 3 PFY08_20470 PF06491 Disulphide isomerase PFY08_20475 PF11208 Protein of unknown function (DUF2992) PFY08_20480 PF00293 NUDIX domain PFY08_20480 PF09297 NADH pyrophosphatase zinc ribbon domain PFY08_20485 PF04239 Protein of unknown function (DUF421) PFY08_20490 PF01098 Cell cycle protein PFY08_20495 PF02817 e3 binding domain PFY08_20495 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) PFY08_20495 PF00364 Biotin-requiring enzyme PFY08_20500 PF02779 Transketolase, pyrimidine binding domain PFY08_20500 PF02780 Transketolase, C-terminal domain PFY08_20505 PF00676 Dehydrogenase E1 component PFY08_20510 PF07992 Pyridine nucleotide-disulphide oxidoreductase PFY08_20510 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain PFY08_20515 PF00871 Acetokinase family PFY08_20520 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase PFY08_20520 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain PFY08_20525 PF01515 Phosphate acetyl/butaryl transferase PFY08_20530 PF02954 Bacterial regulatory protein, Fis family PFY08_20530 PF00989 PAS fold PFY08_20530 PF00158 Sigma-54 interaction domain PFY08_20540 PF03009 Glycerophosphoryl diester phosphodiesterase family PFY08_20545 PF14174 YycC-like protein PFY08_20555 PF00072 Response regulator receiver domain PFY08_20555 PF08769 Sporulation initiation factor Spo0A C terminal PFY08_20560 PF17820 PDZ domain PFY08_20560 PF05580 SpoIVB peptidase S55 PFY08_20565 PF13476 AAA domain PFY08_20570 PF02863 Arginine repressor, C-terminal domain PFY08_20570 PF01316 Arginine repressor, DNA binding domain PFY08_20575 PF01728 FtsJ-like methyltransferase PFY08_20575 PF01479 S4 domain PFY08_20580 PF13292 1-deoxy-D-xylulose-5-phosphate synthase PFY08_20580 PF02779 Transketolase, pyrimidine binding domain PFY08_20580 PF02780 Transketolase, C-terminal domain PFY08_20585 PF00348 Polyprenyl synthetase PFY08_20590 PF02609 Exonuclease VII small subunit PFY08_20595 PF02601 Exonuclease VII, large subunit PFY08_20595 PF13742 OB-fold nucleic acid binding domain PFY08_20600 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain PFY08_20600 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain PFY08_20605 PF01029 NusB family PFY08_20610 PF03780 Asp23 family, cell envelope-related function PFY08_20615 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain PFY08_20615 PF02785 Biotin carboxylase C-terminal domain PFY08_20615 PF00289 Biotin carboxylase, N-terminal domain PFY08_20620 PF00364 Biotin-requiring enzyme PFY08_20630 PF12685 SpoIIIAH-like protein PFY08_20640 PF09581 Stage III sporulation protein AF (Spore_III_AF) PFY08_20645 PF09546 Stage III sporulation protein AE (spore_III_AE) PFY08_20650 PF06686 Stage III sporulation protein AC/AD protein family PFY08_20655 PF06686 Stage III sporulation protein AC/AD protein family PFY08_20660 PF09548 Stage III sporulation protein AB (spore_III_AB) PFY08_20685 PF01132 Elongation factor P (EF-P) OB domain PFY08_20685 PF08207 Elongation factor P (EF-P) KOW-like domain PFY08_20685 PF09285 Elongation factor P, C-terminal PFY08_20690 PF00557 Metallopeptidase family M24 PFY08_20690 PF01321 Creatinase/Prolidase N-terminal domain PFY08_20695 PF01220 Dehydroquinase class II PFY08_20700 PF11085 Conserved membrane protein YqhR PFY08_20705 PF07136 Protein of unknown function (DUF1385) PFY08_20715 PF13419 Haloacid dehalogenase-like hydrolase PFY08_20720 PF01325 Iron dependent repressor, N-terminal DNA binding domain PFY08_20720 PF02742 Iron dependent repressor, metal binding and dimerisation domain PFY08_20745 PF03099 Biotin/lipoate A/B protein ligase family PFY08_20750 PF00581 Rhodanese-like domain PFY08_20760 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family PFY08_20760 PF00356 Bacterial regulatory proteins, lacI family PFY08_20770 PF00893 Small Multidrug Resistance protein PFY08_20775 PF00893 Small Multidrug Resistance protein PFY08_20810 PF00005 ABC transporter PFY08_20815 PF00392 Bacterial regulatory proteins, gntR family PFY08_20830 PF02347 Glycine cleavage system P-protein PFY08_20835 PF02347 Glycine cleavage system P-protein PFY08_20840 PF01571 Aminomethyltransferase folate-binding domain PFY08_20840 PF08669 Glycine cleavage T-protein C-terminal barrel domain PFY08_20845 PF00176 SNF2 family N-terminal domain PFY08_20845 PF00271 Helicase conserved C-terminal domain PFY08_20850 PF11079 Bacterial protein YqhG of unknown function PFY08_20875 PF14038 YqzE-like protein PFY08_20880 PF01202 Shikimate kinase PFY08_20915 PF00482 Type II secretion system (T2SS), protein F PFY08_20920 PF00437 Type II/IV secretion system protein PFY08_20930 PF11117 Protein of unknown function (DUF2626) PFY08_20935 PF00375 Sodium:dicarboxylate symporter family PFY08_20970 PF03033 Glycosyltransferase family 28 N-terminal domain PFY08_20970 PF04101 Glycosyltransferase family 28 C-terminal domain PFY08_20975 PF02965 Vitamin B12 dependent methionine synthase, activation domain PFY08_20975 PF00809 Pterin binding enzyme PFY08_20975 PF02574 Homocysteine S-methyltransferase PFY08_20975 PF02310 B12 binding domain PFY08_20975 PF02607 B12 binding domain PFY08_20980 PF02219 Methylenetetrahydrofolate reductase PFY08_20980 PF02574 Homocysteine S-methyltransferase PFY08_20985 PF01053 Cys/Met metabolism PLP-dependent enzyme PFY08_20990 PF01053 Cys/Met metabolism PLP-dependent enzyme PFY08_21000 PF01022 Bacterial regulatory protein, arsR family PFY08_21010 PF00753 Metallo-beta-lactamase superfamily PFY08_21015 PF10958 Protein of unknown function (DUF2759) PFY08_21020 PF00480 ROK family PFY08_21025 PF06014 Bacterial protein of unknown function (DUF910) PFY08_21030 PF01812 5-formyltetrahydrofolate cyclo-ligase family PFY08_21035 PF00471 Ribosomal protein L33 PFY08_21040 PF00483 Nucleotidyl transferase PFY08_21045 PF01895 PhoU domain PFY08_21050 PF00005 ABC transporter PFY08_21055 PF00528 Binding-protein-dependent transport system inner membrane component PFY08_21060 PF00528 Binding-protein-dependent transport system inner membrane component PFY08_21065 PF12849 PBP superfamily domain PFY08_21070 PF00905 Penicillin binding protein transpeptidase domain PFY08_21070 PF03717 Penicillin-binding Protein dimerisation domain PFY08_21075 PF07690 Major Facilitator Superfamily PFY08_21080 PF02777 Iron/manganese superoxide dismutases, C-terminal domain PFY08_21080 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain PFY08_21090 PF06691 Protein of unknown function (DUF1189) PFY08_21100 PF04551 GcpE protein PFY08_21105 PF01475 Ferric uptake regulator family PFY08_21110 PF00950 ABC 3 transport family PFY08_21115 PF00005 ABC transporter PFY08_21120 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) PFY08_21120 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 PFY08_21125 PF11116 Protein of unknown function (DUF2624) PFY08_21130 PF01261 Xylose isomerase-like TIM barrel PFY08_21135 PF00270 DEAD/DEAH box helicase PFY08_21135 PF00271 Helicase conserved C-terminal domain PFY08_21145 PF02401 LytB protein PFY08_21150 PF01784 NIF3 (NGG1p interacting factor 3) PFY08_21155 PF04816 tRNA (adenine(22)-N(1))-methyltransferase PFY08_21160 PF13442 Cytochrome C oxidase, cbb3-type, subunit III PFY08_21165 PF04539 Sigma-70 region 3 PFY08_21165 PF04545 Sigma-70, region 4 PFY08_21165 PF04542 Sigma-70 region 2 PFY08_21165 PF03979 Sigma-70 factor, region 1.1 PFY08_21165 PF00140 Sigma-70 factor, region 1.2 PFY08_21170 PF10410 DnaB-helicase binding domain of primase PFY08_21170 PF08275 DNA primase catalytic core, N-terminal domain PFY08_21170 PF01807 CHC2 zinc finger PFY08_21180 PF03618 Kinase/pyrophosphorylase PFY08_21185 PF00571 CBS domain PFY08_21185 PF08279 HTH domain PFY08_21190 PF02565 Recombination protein O C terminal PFY08_21190 PF11967 Recombination protein O N terminal PFY08_21200 PF07650 KH domain PFY08_21200 PF01926 50S ribosome-binding GTPase PFY08_21205 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region PFY08_21210 PF01219 Prokaryotic diacylglycerol kinase PFY08_21215 PF02130 Uncharacterized protein family UPF0054 PFY08_21220 PF07697 7TM-HD extracellular PFY08_21220 PF07698 7TM receptor with intracellular HD hydrolase PFY08_21220 PF01966 HD domain PFY08_21225 PF02562 PhoH-like protein PFY08_21230 PF06898 Putative stage IV sporulation protein YqfD PFY08_21235 PF07873 YabP family PFY08_21240 PF09424 Yqey-like protein PFY08_21245 PF01165 Ribosomal protein S21 PFY08_21250 PF04055 Radical SAM superfamily PFY08_21250 PF01938 TRAM domain PFY08_21250 PF00919 Uncharacterized protein family UPF0004 PFY08_21255 PF04452 RNA methyltransferase PFY08_21265 PF00226 DnaJ domain PFY08_21265 PF01556 DnaJ C terminal domain PFY08_21265 PF00684 DnaJ central domain PFY08_21270 PF00012 Hsp70 protein PFY08_21275 PF01025 GrpE PFY08_21280 PF01628 HrcA protein C terminal domain PFY08_21285 PF04055 Radical SAM superfamily PFY08_21285 PF06969 HemN C-terminal domain PFY08_21290 PF01638 HxlR-like helix-turn-helix PFY08_21295 PF00009 Elongation factor Tu GTP binding domain PFY08_21295 PF06421 GTP-binding protein LepA C-terminus PFY08_21295 PF03144 Elongation factor Tu domain 2 PFY08_21295 PF00679 Elongation factor G C-terminus PFY08_21305 PF03418 Germination protease PFY08_21310 PF01649 Ribosomal protein S20 PFY08_21315 PF06144 DNA polymerase III, delta subunit PFY08_21320 PF14141 YqzM-like protein PFY08_21325 PF03772 Competence protein PFY08_21325 PF13567 Domain of unknown function (DUF4131) PFY08_21325 PF00753 Metallo-beta-lactamase superfamily PFY08_21330 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region PFY08_21335 PF10531 SLBB domain PFY08_21340 PF14748 Pyrroline-5-carboxylate reductase dimerisation PFY08_21340 PF03807 NADP oxidoreductase coenzyme F420-dependent PFY08_21345 PF13649 Methyltransferase domain PFY08_21355 PF01966 HD domain PFY08_21360 PF01467 Cytidylyltransferase-like PFY08_21365 PF01985 CRS1 / YhbY (CRM) domain PFY08_21370 PF18317 Shikimate 5'-dehydrogenase C-terminal domain PFY08_21370 PF01488 Shikimate / quinate 5-dehydrogenase PFY08_21370 PF08501 Shikimate dehydrogenase substrate binding domain PFY08_21375 PF01926 50S ribosome-binding GTPase PFY08_21390 PF02666 Phosphatidylserine decarboxylase PFY08_21395 PF04545 Sigma-70, region 4 PFY08_21395 PF04542 Sigma-70 region 2 PFY08_21410 PF00471 Ribosomal protein L33 PFY08_21415 PF00881 Nitroreductase family PFY08_21420 PF04607 Region found in RelA / SpoT proteins PFY08_21430 PF00245 Alkaline phosphatase PFY08_21435 PF00583 Acetyltransferase (GNAT) family PFY08_21440 PF00561 alpha/beta hydrolase fold PFY08_21440 PF08386 TAP-like protein PFY08_21475 PF02225 PA domain PFY08_21475 PF05922 Peptidase inhibitor I9 PFY08_21475 PF13860 FlgD Ig-like domain PFY08_21475 PF00082 Subtilase family PFY08_21480 PF00351 Biopterin-dependent aromatic amino acid hydroxylase PFY08_21490 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily PFY08_21495 PF07681 DoxX PFY08_21525 PF00005 ABC transporter PFY08_21530 PF01032 FecCD transport family PFY08_21535 PF01497 Periplasmic binding protein PFY08_21540 PF14143 YrhC-like protein PFY08_21550 PF00171 Aldehyde dehydrogenase family PFY08_21550 PF00465 Iron-containing alcohol dehydrogenase PFY08_21555 PF01053 Cys/Met metabolism PLP-dependent enzyme PFY08_21560 PF00291 Pyridoxal-phosphate dependent enzyme PFY08_21565 PF01048 Phosphorylase superfamily PFY08_21570 PF08241 Methyltransferase domain PFY08_21585 PF03717 Penicillin-binding Protein dimerisation domain PFY08_21585 PF00905 Penicillin binding protein transpeptidase domain PFY08_21595 PF01272 Transcription elongation factor, GreA/GreB, C-term PFY08_21595 PF03449 Transcription elongation factor, N-terminal PFY08_21600 PF00485 Phosphoribulokinase / Uridine kinase family PFY08_21605 PF16325 Peptidase family U32 C-terminal domain PFY08_21605 PF01136 Peptidase family U32 PFY08_21610 PF01136 Peptidase family U32 PFY08_21615 PF01596 O-methyltransferase PFY08_21620 PF02618 YceG-like family PFY08_21625 PF06949 Protein of unknown function (DUF1292) PFY08_21630 PF03652 Holliday junction resolvase PFY08_21635 PF06135 IreB regulatory phosphoprotein PFY08_21640 PF02272 DHHA1 domain PFY08_21640 PF01411 tRNA synthetases class II (A) PFY08_21640 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain PFY08_21650 PF01594 AI-2E family transporter PFY08_21670 PF14490 Helix-hairpin-helix containing domain PFY08_21670 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain PFY08_21670 PF13538 UvrD-like helicase C-terminal domain PFY08_21685 PF00266 Aminotransferase class-V PFY08_21690 PF02082 Transcriptional regulator PFY08_21695 PF05496 Holliday junction DNA helicase RuvB P-loop domain PFY08_21695 PF12002 MgsA AAA+ ATPase C terminal PFY08_21695 PF16193 AAA C-terminal domain PFY08_21705 PF00899 ThiF family PFY08_21710 PF00152 tRNA synthetases class II (D, K and N) PFY08_21710 PF02938 GAD domain PFY08_21710 PF01336 OB-fold nucleic acid binding domain PFY08_21715 PF03129 Anticodon binding domain PFY08_21715 PF13393 Histidyl-tRNA synthetase PFY08_21725 PF02580 D-Tyr-tRNA(Tyr) deacylase PFY08_21730 PF04607 Region found in RelA / SpoT proteins PFY08_21730 PF02824 TGS domain PFY08_21730 PF13291 ACT domain PFY08_21735 PF00156 Phosphoribosyl transferase domain PFY08_21740 PF01368 DHH family PFY08_21740 PF02272 DHHA1 domain PFY08_21740 PF17768 RecJ OB domain PFY08_21740 PF10141 Single-strand DNA-specific exonuclease, C terminal domain PFY08_21745 PF01545 Cation efflux family PFY08_21745 PF16916 Dimerisation domain of Zinc Transporter PFY08_21750 PF02355 Protein export membrane protein PFY08_21750 PF07549 SecD/SecF GG Motif PFY08_21755 PF13797 Post-transcriptional regulator PFY08_21760 PF01943 Polysaccharide biosynthesis protein PFY08_21760 PF14667 Polysaccharide biosynthesis C-terminal domain PFY08_21765 PF04239 Protein of unknown function (DUF421) PFY08_21775 PF02699 Preprotein translocase subunit PFY08_21780 PF01702 Queuine tRNA-ribosyltransferase PFY08_21785 PF02547 Queuosine biosynthesis protein PFY08_21790 PF11146 Protein of unknown function (DUF2905) PFY08_21795 PF17864 RuvB AAA lid domain PFY08_21795 PF05491 RuvB C-terminal winged helix domain PFY08_21795 PF05496 Holliday junction DNA helicase RuvB P-loop domain PFY08_21800 PF07499 RuvA, C-terminal domain PFY08_21800 PF01330 RuvA N terminal domain PFY08_21805 PF01497 Periplasmic binding protein PFY08_21825 PF01476 LysM domain PFY08_21830 PF02445 Quinolinate synthetase A protein PFY08_21835 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain PFY08_21835 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain PFY08_21840 PF00890 FAD binding domain PFY08_21840 PF02910 Fumarate reductase flavoprotein C-term PFY08_21845 PF00266 Aminotransferase class-V PFY08_21850 PF08279 HTH domain PFY08_21850 PF02829 3H domain PFY08_21855 PF03475 3-alpha domain PFY08_21855 PF03473 MOSC domain PFY08_21860 PF01842 ACT domain PFY08_21860 PF00800 Prephenate dehydratase PFY08_21865 PF02687 FtsX-like permease family PFY08_21870 PF02687 FtsX-like permease family PFY08_21875 PF00005 ABC transporter PFY08_21880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PFY08_21885 PF00072 Response regulator receiver domain PFY08_21885 PF00486 Transcriptional regulatory protein, C terminal PFY08_21890 PF09269 Domain of unknown function (DUF1967) PFY08_21890 PF01018 GTP1/OBG PFY08_21890 PF01926 50S ribosome-binding GTPase PFY08_21895 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain PFY08_21895 PF14682 Sporulation initiation phospho-transferase B, C-terminal PFY08_21900 PF01016 Ribosomal L27 protein PFY08_21905 PF04327 Cysteine protease Prp PFY08_21910 PF00829 Ribosomal prokaryotic L21 protein PFY08_21915 PF00575 S1 RNA binding domain PFY08_21915 PF10150 Ribonuclease E/G family PFY08_21920 PF02163 Peptidase family M50 PFY08_21925 PF01551 Peptidase family M23 PFY08_21930 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain PFY08_21935 PF03775 Septum formation inhibitor MinC, C-terminal domain PFY08_21945 PF04085 rod shape-determining protein MreC PFY08_21955 PF04002 RadC-like JAB domain PFY08_21960 PF02545 Maf-like protein PFY08_21970 PF02875 Mur ligase family, glutamate ligase domain PFY08_21970 PF08245 Mur ligase middle domain PFY08_21975 PF10458 Valyl tRNA synthetase tRNA binding arm PFY08_21975 PF00133 tRNA synthetases class I (I, L, M and V) PFY08_21975 PF08264 Anticodon-binding domain of tRNA PFY08_21985 PF01476 LysM domain PFY08_21990 PF00202 Aminotransferase class-III PFY08_21995 PF00490 Delta-aminolevulinic acid dehydratase PFY08_22000 PF02602 Uroporphyrinogen-III synthase HemD PFY08_22005 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain PFY08_22005 PF03900 Porphobilinogen deaminase, C-terminal domain PFY08_22010 PF01578 Cytochrome C assembly protein PFY08_22015 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain PFY08_22015 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain PFY08_22015 PF01488 Shikimate / quinate 5-dehydrogenase PFY08_22020 PF01047 MarR family PFY08_22025 PF02566 OsmC-like protein PFY08_22030 PF01926 50S ribosome-binding GTPase PFY08_22035 PF00004 ATPase family associated with various cellular activities (AAA) PFY08_22035 PF05362 Lon protease (S16) C-terminal proteolytic domain PFY08_22035 PF02190 ATP-dependent protease La (LON) substrate-binding domain PFY08_22040 PF00004 ATPase family associated with various cellular activities (AAA) PFY08_22040 PF05362 Lon protease (S16) C-terminal proteolytic domain PFY08_22045 PF07724 AAA domain (Cdc48 subfamily) PFY08_22045 PF10431 C-terminal, D2-small domain, of ClpB protein PFY08_22045 PF06689 ClpX C4-type zinc finger PFY08_22050 PF05698 Bacterial trigger factor protein (TF) C-terminus PFY08_22050 PF05697 Bacterial trigger factor protein (TF) PFY08_22050 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase PFY08_22065 PF11724 YvbH-like oligomerisation region PFY08_22065 PF08000 Bacterial PH domain PFY08_22085 PF12850 Calcineurin-like phosphoesterase superfamily domain PFY08_22090 PF01725 Ham1 family PFY08_22095 PF03725 3' exoribonuclease family, domain 2 PFY08_22095 PF01138 3' exoribonuclease family, domain 1 PFY08_22100 PF10646 Sporulation and spore germination PFY08_22105 PF01177 Asp/Glu/Hydantoin racemase PFY08_22110 PF07690 Major Facilitator Superfamily PFY08_22120 PF00440 Bacterial regulatory proteins, tetR family PFY08_22130 PF00196 Bacterial regulatory proteins, luxR family PFY08_22135 PF00860 Permease family PFY08_22140 PF07969 Amidohydrolase family PFY08_22145 PF04024 PspC domain PFY08_22150 PF07883 Cupin domain PFY08_22150 PF01381 Helix-turn-helix PFY08_22155 PF13536 Putative multidrug resistance efflux transporter PFY08_22160 PF00230 Major intrinsic protein PFY08_22165 PF02082 Transcriptional regulator PFY08_22175 PF00005 ABC transporter PFY08_22175 PF13732 Domain of unknown function (DUF4162) PFY08_22180 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) PFY08_22185 PF00691 OmpA family PFY08_22185 PF13677 Membrane MotB of proton-channel complex MotA/MotB PFY08_22190 PF01618 MotA/TolQ/ExbB proton channel family PFY08_22195 PF02557 D-alanyl-D-alanine carboxypeptidase PFY08_22200 PF03061 Thioesterase superfamily PFY08_22205 PF13183 4Fe-4S dicluster domain PFY08_22205 PF13085 2Fe-2S iron-sulfur cluster binding domain PFY08_22210 PF02910 Fumarate reductase flavoprotein C-term PFY08_22210 PF00890 FAD binding domain PFY08_22215 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit PFY08_22220 PF10702 Protein of unknown function (DUF2507) PFY08_22225 PF02151 UvrB/uvrC motif PFY08_22225 PF01541 GIY-YIG catalytic domain PFY08_22225 PF08459 UvrC Helix-hairpin-helix N-terminal PFY08_22230 PF00085 Thioredoxin PFY08_22235 PF01012 Electron transfer flavoprotein domain PFY08_22235 PF00766 Electron transfer flavoprotein FAD-binding domain PFY08_22240 PF01012 Electron transfer flavoprotein domain PFY08_22245 PF00378 Enoyl-CoA hydratase/isomerase PFY08_22250 PF00440 Bacterial regulatory proteins, tetR family PFY08_22250 PF08359 YsiA-like protein, C-terminal region PFY08_22255 PF00501 AMP-binding enzyme PFY08_22255 PF13193 AMP-binding enzyme C-terminal domain PFY08_22265 PF01497 Periplasmic binding protein PFY08_22270 PF01032 FecCD transport family PFY08_22280 PF05163 DinB family PFY08_22310 PF00005 ABC transporter PFY08_22315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PFY08_22315 PF00512 His Kinase A (phospho-acceptor) domain PFY08_22320 PF00072 Response regulator receiver domain PFY08_22320 PF00486 Transcriptional regulatory protein, C terminal PFY08_22330 PF09962 Uncharacterized conserved protein (DUF2196) PFY08_22335 PF17785 PUA-like domain PFY08_22335 PF10672 S-adenosylmethionine-dependent methyltransferase PFY08_22340 PF03992 Antibiotic biosynthesis monooxygenase PFY08_22345 PF04203 Sortase domain PFY08_22350 PF00005 ABC transporter PFY08_22355 PF01032 FecCD transport family PFY08_22360 PF01497 Periplasmic binding protein PFY08_22365 PF05031 Iron Transport-associated domain PFY08_22375 PF05031 Iron Transport-associated domain PFY08_22380 PF05525 Branched-chain amino acid transport protein PFY08_22385 PF01479 S4 domain PFY08_22385 PF00849 RNA pseudouridylate synthase PFY08_22390 PF01713 Smr domain PFY08_22390 PF00488 MutS domain V PFY08_22395 PF14716 Helix-hairpin-helix domain PFY08_22395 PF14791 DNA polymerase beta thumb PFY08_22395 PF02811 PHP domain PFY08_22400 PF02674 Colicin V production protein PFY08_22405 PF05164 Cell division protein ZapA PFY08_22410 PF11858 Domain of unknown function (DUF3378) PFY08_22410 PF01351 Ribonuclease HII PFY08_22430 PF00152 tRNA synthetases class II (D, K and N) PFY08_22430 PF01336 OB-fold nucleic acid binding domain PFY08_22435 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain PFY08_22435 PF01588 Putative tRNA binding domain PFY08_22435 PF03147 Ferredoxin-fold anticodon binding domain PFY08_22435 PF03483 B3/4 domain PFY08_22435 PF03484 tRNA synthetase B5 domain PFY08_22440 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain PFY08_22440 PF01409 tRNA synthetases class II core domain (F) PFY08_22445 PF08032 RNA 2'-O ribose methyltransferase substrate binding PFY08_22445 PF00588 SpoU rRNA Methylase family PFY08_22450 PF14098 Small, acid-soluble spore protein I PFY08_22455 PF01966 HD domain PFY08_22475 PF07690 Major Facilitator Superfamily PFY08_22485 PF16859 Tetracyclin repressor-like, C-terminal domain PFY08_22485 PF00440 Bacterial regulatory proteins, tetR family PFY08_22490 PF05343 M42 glutamyl aminopeptidase PFY08_22500 PF00453 Ribosomal protein L20 PFY08_22505 PF01632 Ribosomal protein L35 PFY08_22510 PF05198 Translation initiation factor IF-3, N-terminal domain PFY08_22510 PF00707 Translation initiation factor IF-3, C-terminal domain PFY08_22515 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) PFY08_22515 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain PFY08_22515 PF02824 TGS domain PFY08_22515 PF03129 Anticodon binding domain PFY08_22520 PF08812 YtxC-like family PFY08_22525 PF13783 Domain of unknown function (DUF4177) PFY08_22530 PF07319 Primosomal protein DnaI N-terminus PFY08_22530 PF01695 IstB-like ATP binding protein PFY08_22535 PF07261 Replication initiation and membrane attachment PFY08_22540 PF03477 ATP cone domain PFY08_22545 PF02675 S-adenosylmethionine decarboxylase PFY08_22550 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain PFY08_22550 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain PFY08_22555 PF01121 Dephospho-CoA kinase PFY08_22560 PF02659 Putative manganese efflux pump PFY08_22565 PF06827 Zinc finger found in FPG and IleRS PFY08_22565 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain PFY08_22565 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain PFY08_22570 PF00476 DNA polymerase family A PFY08_22570 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain PFY08_22570 PF01367 5'-3' exonuclease, C-terminal SAM fold PFY08_22575 PF00512 His Kinase A (phospho-acceptor) domain PFY08_22575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PFY08_22575 PF00989 PAS fold PFY08_22575 PF16736 Single Cache-like PFY08_22580 PF00486 Transcriptional regulatory protein, C terminal PFY08_22580 PF00072 Response regulator receiver domain PFY08_22600 PF00056 lactate/malate dehydrogenase, NAD binding domain PFY08_22600 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain PFY08_22605 PF00180 Isocitrate/isopropylmalate dehydrogenase PFY08_22610 PF00285 Citrate synthase, C-terminal domain PFY08_22615 PF04284 Protein of unknown function (DUF441) PFY08_22620 PF01594 AI-2E family transporter PFY08_22625 PF04186 FxsA cytoplasmic membrane protein PFY08_22630 PF00224 Pyruvate kinase, barrel domain PFY08_22630 PF00391 PEP-utilising enzyme, mobile domain PFY08_22630 PF02887 Pyruvate kinase, alpha/beta domain PFY08_22635 PF00365 Phosphofructokinase PFY08_22640 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit PFY08_22645 PF01039 Carboxyl transferase domain PFY08_22645 PF17848 Acetyl-coA carboxylase zinc finger domain PFY08_22650 PF00392 Bacterial regulatory proteins, gntR family PFY08_22655 PF00390 Malic enzyme, N-terminal domain PFY08_22655 PF03949 Malic enzyme, NAD binding domain PFY08_22660 PF17657 Bacterial DNA polymerase III alpha subunit finger domain PFY08_22660 PF07733 Bacterial DNA polymerase III alpha NTPase domain PFY08_22660 PF14579 Helix-hairpin-helix motif PFY08_22660 PF02811 PHP domain PFY08_22660 PF01336 OB-fold nucleic acid binding domain PFY08_22665 PF14034 Sporulation protein YtrH PFY08_22675 PF01368 DHH family PFY08_22675 PF02272 DHHA1 domain PFY08_22680 PF14007 YtpI-like protein PFY08_22690 PF00392 Bacterial regulatory proteins, gntR family PFY08_22690 PF07085 DRTGG domain PFY08_22690 PF00571 CBS domain PFY08_22690 PF03061 Thioesterase superfamily PFY08_22705 PF01321 Creatinase/Prolidase N-terminal domain PFY08_22705 PF00557 Metallopeptidase family M24 PFY08_22745 PF12746 GNAT acetyltransferase PFY08_22750 PF07883 Cupin domain PFY08_22760 PF01262 Alanine dehydrogenase/PNT, C-terminal domain PFY08_22760 PF05222 Alanine dehydrogenase/PNT, N-terminal domain PFY08_22770 PF00582 Universal stress protein family PFY08_22790 PF00206 Lyase PFY08_22790 PF14698 Argininosuccinate lyase C-terminal PFY08_22795 PF00764 Arginosuccinate synthase PFY08_22810 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) PFY08_22810 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 PFY08_22815 PF12787 EcsC protein family PFY08_22830 PF00871 Acetokinase family PFY08_22835 PF02384 N-6 DNA Methylase PFY08_22840 PF08534 Redoxin PFY08_22845 PF09579 Sporulation protein YtfJ (Spore_YtfJ) PFY08_22855 PF01513 ATP-NAD kinase PFY08_22860 PF07969 Amidohydrolase family PFY08_22870 PF00501 AMP-binding enzyme PFY08_22870 PF13193 AMP-binding enzyme C-terminal domain PFY08_22875 PF00269 Small, acid-soluble spore proteins, alpha/beta type PFY08_22880 PF02926 THUMP domain PFY08_22880 PF02568 Thiamine biosynthesis protein (ThiI) PFY08_22885 PF00266 Aminotransferase class-V PFY08_22890 PF06160 Septation ring formation regulator, EzrA PFY08_22895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PFY08_22895 PF03466 LysR substrate binding domain PFY08_22905 PF00440 Bacterial regulatory proteins, tetR family PFY08_22910 PF13185 GAF domain PFY08_22915 PF01053 Cys/Met metabolism PLP-dependent enzyme PFY08_22920 PF01479 S4 domain PFY08_22920 PF00163 Ribosomal protein S4/S9 N-terminal domain PFY08_22935 PF00579 tRNA synthetases class I (W and Y) PFY08_22935 PF01479 S4 domain PFY08_22940 PF14602 Hexapeptide repeat of succinyl-transferase PFY08_22940 PF12464 Maltose acetyltransferase PFY08_22945 PF00501 AMP-binding enzyme PFY08_22945 PF13193 AMP-binding enzyme C-terminal domain PFY08_22950 PF00583 Acetyltransferase (GNAT) family PFY08_22955 PF00571 CBS domain PFY08_22960 PF00850 Histone deacetylase domain PFY08_22975 PF00486 Transcriptional regulatory protein, C terminal PFY08_22975 PF00072 Response regulator receiver domain PFY08_22980 PF00672 HAMP domain PFY08_22980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PFY08_22980 PF00512 His Kinase A (phospho-acceptor) domain PFY08_22980 PF13426 PAS domain PFY08_22985 PF12796 Ankyrin repeats (3 copies) PFY08_22990 PF01408 Oxidoreductase family, NAD-binding Rossmann fold PFY08_22995 PF01741 Large-conductance mechanosensitive channel, MscL PFY08_23010 PF00356 Bacterial regulatory proteins, lacI family PFY08_23015 PF01817 Chorismate mutase type II PFY08_23015 PF00793 DAHP synthetase I family PFY08_23020 PF07537 CamS sex pheromone cAM373 precursor PFY08_23025 PF11009 Protein of unknown function (DUF2847) PFY08_23035 PF02073 Thermophilic metalloprotease (M29) PFY08_23060 PF13302 Acetyltransferase (GNAT) domain PFY08_23065 PF01225 Mur ligase family, catalytic domain PFY08_23065 PF02875 Mur ligase family, glutamate ligase domain PFY08_23065 PF08245 Mur ligase middle domain PFY08_23080 PF01520 N-acetylmuramoyl-L-alanine amidase PFY08_23080 PF01476 LysM domain PFY08_23090 PF14794 Domain of unknown function (DUF4479) PFY08_23090 PF01588 Putative tRNA binding domain PFY08_23095 PF07285 Protein of unknown function (DUF1444) PFY08_23100 PF00085 Thioredoxin PFY08_23105 PF01931 Protein of unknown function DUF84 PFY08_23110 PF05343 M42 glutamyl aminopeptidase PFY08_23120 PF00753 Metallo-beta-lactamase superfamily PFY08_23125 PF02390 Putative methyltransferase PFY08_23130 PF14165 YtzH-like protein PFY08_23135 PF01636 Phosphotransferase enzyme family PFY08_23140 PF00128 Alpha amylase, catalytic domain PFY08_23140 PF17999 Pullulanase N1-terminal domain PFY08_23140 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) PFY08_23145 PF02834 LigT like Phosphoesterase PFY08_23150 PF01546 Peptidase family M20/M25/M40 PFY08_23155 PF08220 DeoR-like helix-turn-helix domain PFY08_23160 PF01479 S4 domain PFY08_23160 PF00849 RNA pseudouridylate synthase PFY08_23165 PF14667 Polysaccharide biosynthesis C-terminal domain PFY08_23165 PF01943 Polysaccharide biosynthesis protein PFY08_23175 PF07690 Major Facilitator Superfamily PFY08_23180 PF01022 Bacterial regulatory protein, arsR family PFY08_23185 PF08327 Activator of Hsp90 ATPase homolog 1-like protein PFY08_23195 PF10957 Sporulation protein Cse60 PFY08_23205 PF02559 CarD-like/TRCF domain PFY08_23215 PF06800 Sugar transport protein PFY08_23230 PF02391 MoaE protein PFY08_23235 PF03205 Molybdopterin guanine dinucleotide synthesis protein B PFY08_23240 PF03453 MoeA N-terminal region (domain I and II) PFY08_23240 PF03454 MoeA C-terminal region (domain IV) PFY08_23240 PF00994 Probable molybdopterin binding domain PFY08_23245 PF01967 MoaC family PFY08_23250 PF00899 ThiF family PFY08_23255 PF06463 Molybdenum Cofactor Synthesis C PFY08_23255 PF04055 Radical SAM superfamily PFY08_23275 PF00581 Rhodanese-like domain PFY08_23285 PF00561 alpha/beta hydrolase fold PFY08_23290 PF03323 Bacillus/Clostridium GerA spore germination protein PFY08_23295 PF03845 Spore germination protein PFY08_23320 PF00133 tRNA synthetases class I (I, L, M and V) PFY08_23320 PF09334 tRNA synthetases class I (M) PFY08_23320 PF13603 Leucyl-tRNA synthetase, Domain 2 PFY08_23320 PF08264 Anticodon-binding domain of tRNA PFY08_23325 PF07690 Major Facilitator Superfamily PFY08_23330 PF00999 Sodium/hydrogen exchanger family PFY08_23335 PF02080 TrkA-C domain PFY08_23340 PF00589 Phage integrase family PFY08_23350 PF00005 ABC transporter PFY08_23355 PF07786 Protein of unknown function (DUF1624) PFY08_23355 PF04235 Protein of unknown function (DUF418) PFY08_23365 PF10732 Protein of unknown function (DUF2524) PFY08_23370 PF04055 Radical SAM superfamily PFY08_23370 PF16199 Radical_SAM C-terminal domain PFY08_23375 PF06962 Putative rRNA methylase PFY08_23380 PF01177 Asp/Glu/Hydantoin racemase PFY08_23395 PF10776 Protein of unknown function (DUF2600) PFY08_23400 PF12146 Serine aminopeptidase, S33 PFY08_23405 PF00132 Bacterial transferase hexapeptide (six repeats) PFY08_23410 PF01569 PAP2 superfamily PFY08_23415 PF00534 Glycosyl transferases group 1 PFY08_23415 PF13439 Glycosyltransferase Family 4 PFY08_23420 PF12804 MobA-like NTP transferase domain PFY08_23425 PF00994 Probable molybdopterin binding domain PFY08_23435 PF13302 Acetyltransferase (GNAT) domain PFY08_23440 PF00438 S-adenosylmethionine synthetase, N-terminal domain PFY08_23440 PF02772 S-adenosylmethionine synthetase, central domain PFY08_23440 PF02773 S-adenosylmethionine synthetase, C-terminal domain PFY08_23445 PF01293 Phosphoenolpyruvate carboxykinase PFY08_23480 PF13426 PAS domain PFY08_23480 PF13188 PAS domain PFY08_23480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PFY08_23480 PF00512 His Kinase A (phospho-acceptor) domain PFY08_23480 PF00989 PAS fold PFY08_23485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PFY08_23485 PF00512 His Kinase A (phospho-acceptor) domain PFY08_23485 PF02743 Cache domain PFY08_23490 PF06628 Catalase-related immune-responsive PFY08_23490 PF18011 C-terminal domain found in long catalases PFY08_23490 PF00199 Catalase PFY08_23500 PF00561 alpha/beta hydrolase fold PFY08_23500 PF08386 TAP-like protein PFY08_23505 PF00884 Sulfatase PFY08_23525 PF00005 ABC transporter PFY08_23530 PF00528 Binding-protein-dependent transport system inner membrane component PFY08_23545 PF13419 Haloacid dehalogenase-like hydrolase PFY08_23555 PF00293 NUDIX domain PFY08_23585 PF02664 S-Ribosylhomocysteinase (LuxS) PFY08_23590 PF01809 Putative membrane protein insertion efficiency factor PFY08_23595 PF00484 Carbonic anhydrase PFY08_23600 PF01654 Cytochrome bd terminal oxidase subunit I PFY08_23605 PF02322 Cytochrome bd terminal oxidase subunit II PFY08_23610 PF10676 Spore germination protein gerPA/gerPF PFY08_23620 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) PFY08_23620 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 PFY08_23640 PF04012 PspA/IM30 family PFY08_23655 PF07664 Ferrous iron transport protein B C terminus PFY08_23655 PF17910 FeoB cytosolic helical domain PFY08_23655 PF02421 Ferrous iron transport protein B PFY08_23655 PF07670 Nucleoside recognition PFY08_23665 PF09515 Thiamine transporter protein (Thia_YuaJ) PFY08_23670 PF00512 His Kinase A (phospho-acceptor) domain PFY08_23670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PFY08_23670 PF00672 HAMP domain PFY08_23675 PF00486 Transcriptional regulatory protein, C terminal PFY08_23675 PF00072 Response regulator receiver domain PFY08_23700 PF00156 Phosphoribosyl transferase domain PFY08_23705 PF00781 Diacylglycerol kinase catalytic domain PFY08_23725 PF02687 FtsX-like permease family PFY08_23730 PF00005 ABC transporter PFY08_23745 PF09335 SNARE associated Golgi protein PFY08_23750 PF00398 Ribosomal RNA adenine dimethylase PFY08_23755 PF02687 FtsX-like permease family PFY08_23760 PF00005 ABC transporter PFY08_23765 PF06445 GyrI-like small molecule binding domain PFY08_23765 PF12833 Helix-turn-helix domain PFY08_23775 PF07853 Protein of unknown function (DUF1648) PFY08_23775 PF13630 SdpI/YhfL protein family PFY08_23780 PF01022 Bacterial regulatory protein, arsR family PFY08_23785 PF00486 Transcriptional regulatory protein, C terminal PFY08_23785 PF00072 Response regulator receiver domain PFY08_23790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PFY08_23795 PF02687 FtsX-like permease family PFY08_23800 PF02687 FtsX-like permease family PFY08_23805 PF00005 ABC transporter PFY08_23810 PF02687 FtsX-like permease family PFY08_23820 PF00440 Bacterial regulatory proteins, tetR family PFY08_23820 PF13977 BetI-type transcriptional repressor, C-terminal PFY08_23830 PF02447 GntP family permease PFY08_23835 PF07702 UTRA domain PFY08_23835 PF00392 Bacterial regulatory proteins, gntR family PFY08_23845 PF07071 KDGP aldolase PFY08_23850 PF03841 L-seryl-tRNA selenium transferase PFY08_23855 PF01979 Amidohydrolase family PFY08_23870 PF02557 D-alanyl-D-alanine carboxypeptidase PFY08_23875 PF00512 His Kinase A (phospho-acceptor) domain PFY08_23875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PFY08_23880 PF00072 Response regulator receiver domain PFY08_23880 PF00486 Transcriptional regulatory protein, C terminal PFY08_23885 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain PFY08_23885 PF13378 Enolase C-terminal domain-like PFY08_23890 PF13193 AMP-binding enzyme C-terminal domain PFY08_23890 PF00501 AMP-binding enzyme PFY08_23895 PF00378 Enoyl-CoA hydratase/isomerase PFY08_23900 PF00561 alpha/beta hydrolase fold PFY08_23905 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PFY08_23905 PF16582 Middle domain of thiamine pyrophosphate PFY08_23905 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain PFY08_23910 PF00425 chorismate binding enzyme PFY08_23915 PF01040 UbiA prenyltransferase family PFY08_23920 PF01258 Prokaryotic dksA/traR C4-type zinc finger PFY08_23925 PF00313 'Cold-shock' DNA-binding domain PFY08_23950 PF00343 Carbohydrate phosphorylase PFY08_23955 PF00534 Glycosyl transferases group 1 PFY08_23955 PF08323 Starch synthase catalytic domain PFY08_23960 PF00483 Nucleotidyl transferase PFY08_23965 PF00483 Nucleotidyl transferase PFY08_23970 PF02806 Alpha amylase, C-terminal all-beta domain PFY08_23970 PF00128 Alpha amylase, catalytic domain PFY08_23970 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) PFY08_23980 PF00082 Subtilase family PFY08_23980 PF02225 PA domain PFY08_23980 PF05922 Peptidase inhibitor I9 PFY08_23980 PF13860 FlgD Ig-like domain PFY08_23985 PF00056 lactate/malate dehydrogenase, NAD binding domain PFY08_23985 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain PFY08_24080 PF05697 Bacterial trigger factor protein (TF) PFY08_24080 PF05698 Bacterial trigger factor protein (TF) C-terminus PFY08_24115 PF02308 MgtC family PFY08_24120 PF07885 Ion channel PFY08_24120 PF02254 TrkA-N domain PFY08_24125 PF08868 YugN-like family PFY08_24130 PF00342 Phosphoglucose isomerase PFY08_24135 PF04070 Domain of unknown function (DUF378) PFY08_24140 PF00575 S1 RNA binding domain PFY08_24145 PF00155 Aminotransferase class I and II PFY08_24150 PF01037 Lrp/AsnC ligand binding domain PFY08_24155 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PFY08_24155 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PFY08_24160 PF00561 alpha/beta hydrolase fold PFY08_24160 PF08386 TAP-like protein PFY08_24170 PF00155 Aminotransferase class I and II PFY08_24185 PF08810 Kinase associated protein B PFY08_24190 PF00929 Exonuclease PFY08_24195 PF03600 Citrate transporter PFY08_24210 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) PFY08_24210 PF03129 Anticodon binding domain PFY08_24215 PF03061 Thioesterase superfamily PFY08_24225 PF02632 BioY family PFY08_24230 PF00483 Nucleotidyl transferase PFY08_24235 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PFY08_24235 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PFY08_24235 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PFY08_24235 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain PFY08_24240 PF02457 DisA bacterial checkpoint controller nucleotide-binding PFY08_24240 PF10372 Bacterial membrane-spanning protein N-terminus PFY08_24255 PF00892 EamA-like transporter family PFY08_24260 PF01040 UbiA prenyltransferase family PFY08_24265 PF00883 Cytosol aminopeptidase family, catalytic domain PFY08_24265 PF02789 Cytosol aminopeptidase family, N-terminal domain PFY08_24280 PF00892 EamA-like transporter family PFY08_24285 PF01040 UbiA prenyltransferase family PFY08_24290 PF06725 3D domain PFY08_24300 PF00293 NUDIX domain PFY08_24300 PF13344 Haloacid dehalogenase-like hydrolase PFY08_24305 PF07992 Pyridine nucleotide-disulphide oxidoreductase PFY08_24310 PF07992 Pyridine nucleotide-disulphide oxidoreductase PFY08_24320 PF06445 GyrI-like small molecule binding domain PFY08_24335 PF04463 Protein of unknown function (DUF523) PFY08_24370 PF00145 C-5 cytosine-specific DNA methylase PFY08_24415 PF00239 Resolvase, N terminal domain PFY08_24415 PF02796 Helix-turn-helix domain of resolvase PFY08_24435 PF02899 Phage integrase, N-terminal SAM-like domain PFY08_24435 PF00589 Phage integrase family PFY08_24440 PF01521 Iron-sulphur cluster biosynthesis PFY08_24445 PF01678 Diaminopimelate epimerase PFY08_24450 PF07293 Protein of unknown function (DUF1450) PFY08_24455 PF07992 Pyridine nucleotide-disulphide oxidoreductase PFY08_24465 PF00664 ABC transporter transmembrane region PFY08_24465 PF00005 ABC transporter PFY08_24465 PF03412 Peptidase C39 family PFY08_24470 PF03649 Uncharacterised protein family (UPF0014) PFY08_24475 PF08274 PhnA Zinc-Ribbon PFY08_24475 PF03831 PhnA domain PFY08_24495 PF13427 Domain of unknown function (DUF4111) PFY08_24495 PF01909 Nucleotidyltransferase domain PFY08_24500 PF07315 Protein of unknown function (DUF1462) PFY08_24505 PF01106 NifU-like domain PFY08_24520 PF04608 Phosphatidylglycerophosphatase A PFY08_24540 PF15608 PELOTA RNA binding domain PFY08_24540 PF11202 Phosphoribosyl transferase (PRTase) PFY08_24550 PF02525 Flavodoxin-like fold PFY08_24555 PF13344 Haloacid dehalogenase-like hydrolase PFY08_24565 PF01934 Protein of unknown function DUF86 PFY08_24570 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded PFY08_24585 PF06265 Protein of unknown function (DUF1027) PFY08_24590 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) PFY08_24595 PF13411 MerR HTH family regulatory protein PFY08_24595 PF07739 TipAS antibiotic-recognition domain PFY08_24600 PF10086 YhfC intramembrane metalloprotease PFY08_24620 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family PFY08_24620 PF04055 Radical SAM superfamily PFY08_24625 PF01551 Peptidase family M23 PFY08_24630 PF09560 Sporulation protein YunB (Spo_YunB) PFY08_24635 PF08827 Domain of unknown function (DUF1805) PFY08_24640 PF02872 5'-nucleotidase, C-terminal domain PFY08_24645 PF01458 Uncharacterized protein family (UPF0051) PFY08_24650 PF01592 NifU-like N terminal domain PFY08_24655 PF00266 Aminotransferase class-V PFY08_24660 PF01458 Uncharacterized protein family (UPF0051) PFY08_24665 PF00005 ABC transporter PFY08_24670 PF03180 NLPA lipoprotein PFY08_24675 PF03180 NLPA lipoprotein PFY08_24680 PF00528 Binding-protein-dependent transport system inner membrane component PFY08_24685 PF00005 ABC transporter PFY08_24685 PF09383 NIL domain PFY08_24695 PF00085 Thioredoxin PFY08_24700 PF01751 Toprim domain PFY08_24705 PF01597 Glycine cleavage H-protein PFY08_24710 PF03960 ArsC family PFY08_24730 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain PFY08_24730 PF00056 lactate/malate dehydrogenase, NAD binding domain PFY08_24750 PF13305 Tetracyclin repressor-like, C-terminal domain PFY08_24750 PF00440 Bacterial regulatory proteins, tetR family PFY08_24755 PF00753 Metallo-beta-lactamase superfamily PFY08_24760 PF02770 Acyl-CoA dehydrogenase, middle domain PFY08_24760 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PFY08_24760 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PFY08_24765 PF02803 Thiolase, C-terminal domain PFY08_24765 PF00108 Thiolase, N-terminal domain PFY08_24770 PF00378 Enoyl-CoA hydratase/isomerase PFY08_24770 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain PFY08_24770 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain PFY08_24775 PF14115 YuzL-like protein PFY08_24780 PF00768 D-alanyl-D-alanine carboxypeptidase PFY08_24780 PF07943 Penicillin-binding protein 5, C-terminal domain PFY08_24785 PF01619 Proline dehydrogenase PFY08_24790 PF10835 Protein of unknown function (DUF2573) PFY08_24795 PF01910 Thiamine-binding protein PFY08_24800 PF00672 HAMP domain PFY08_24800 PF02743 Cache domain PFY08_24800 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PFY08_24815 PF07690 Major Facilitator Superfamily PFY08_24820 PF13520 Amino acid permease PFY08_24835 PF02096 60Kd inner membrane protein PFY08_24845 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 PFY08_24845 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) PFY08_24880 PF09335 SNARE associated Golgi protein PFY08_24890 PF17969 L,D-transpeptidase C-terminal domain PFY08_24890 PF03734 L,D-transpeptidase catalytic domain PFY08_24895 PF00072 Response regulator receiver domain PFY08_24895 PF00486 Transcriptional regulatory protein, C terminal PFY08_24900 PF00512 His Kinase A (phospho-acceptor) domain PFY08_24900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PFY08_24900 PF00989 PAS fold PFY08_24900 PF16736 Single Cache-like PFY08_24915 PF08264 Anticodon-binding domain of tRNA PFY08_24915 PF09334 tRNA synthetases class I (M) PFY08_24925 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PFY08_24925 PF00672 HAMP domain PFY08_24925 PF02743 Cache domain PFY08_24930 PF02743 Cache domain PFY08_24930 PF00672 HAMP domain PFY08_24930 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PFY08_24935 PF01883 Iron-sulfur cluster assembly protein PFY08_24940 PF07504 Fungalysin/Thermolysin Propeptide Motif PFY08_24940 PF02868 Thermolysin metallopeptidase, alpha-helical domain PFY08_24940 PF03413 Peptidase propeptide and YPEB domain PFY08_24940 PF01447 Thermolysin metallopeptidase, catalytic domain PFY08_24945 PF17954 Quercetinase C-terminal cupin domain PFY08_24945 PF02678 Pirin PFY08_24950 PF01047 MarR family PFY08_24960 PF09335 SNARE associated Golgi protein PFY08_24965 PF00999 Sodium/hydrogen exchanger family PFY08_24970 PF02080 TrkA-C domain PFY08_24975 PF01235 Sodium:alanine symporter family PFY08_24980 PF00210 Ferritin-like domain PFY08_24995 PF03641 Possible lysine decarboxylase PFY08_25005 PF00210 Ferritin-like domain PFY08_25010 PF04235 Protein of unknown function (DUF418) PFY08_25010 PF07786 Protein of unknown function (DUF1624) PFY08_25015 PF01773 Na+ dependent nucleoside transporter N-terminus PFY08_25015 PF07662 Na+ dependent nucleoside transporter C-terminus PFY08_25020 PF01773 Na+ dependent nucleoside transporter N-terminus PFY08_25020 PF07662 Na+ dependent nucleoside transporter C-terminus PFY08_25025 PF01235 Sodium:alanine symporter family PFY08_25030 PF01235 Sodium:alanine symporter family PFY08_25035 PF13460 NAD(P)H-binding PFY08_25050 PF00248 Aldo/keto reductase family PFY08_25055 PF07690 Major Facilitator Superfamily PFY08_25060 PF01638 HxlR-like helix-turn-helix PFY08_25065 PF07849 Protein of unknown function (DUF1641) PFY08_25070 PF07992 Pyridine nucleotide-disulphide oxidoreductase PFY08_25075 PF01479 S4 domain PFY08_25075 PF00579 tRNA synthetases class I (W and Y) PFY08_25080 PF01565 FAD binding domain PFY08_25080 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain PFY08_25090 PF00672 HAMP domain PFY08_25090 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PFY08_25090 PF17202 Single cache domain 3 PFY08_25100 PF02537 CrcB-like protein, Camphor Resistance (CrcB) PFY08_25105 PF02537 CrcB-like protein, Camphor Resistance (CrcB) PFY08_25120 PF07690 Major Facilitator Superfamily PFY08_25125 PF00005 ABC transporter PFY08_25125 PF12848 ABC transporter PFY08_25130 PF13302 Acetyltransferase (GNAT) domain PFY08_25135 PF06146 Phosphate-starvation-inducible E PFY08_25165 PF17440 Thiol-activated cytolysin beta sandwich domain PFY08_25165 PF01289 Thiol-activated cytolysin PFY08_25170 PF00005 ABC transporter PFY08_25175 PF01032 FecCD transport family PFY08_25180 PF01032 FecCD transport family PFY08_25190 PF00486 Transcriptional regulatory protein, C terminal PFY08_25190 PF00072 Response regulator receiver domain PFY08_25200 PF01668 SmpB protein PFY08_25205 PF17876 Cold shock domain PFY08_25205 PF00575 S1 RNA binding domain PFY08_25205 PF00773 RNB domain PFY08_25205 PF08206 Ribonuclease B OB domain PFY08_25210 PF12146 Serine aminopeptidase, S33 PFY08_25215 PF03840 Preprotein translocase SecG subunit PFY08_25220 PF04172 LrgB-like family PFY08_25225 PF03788 LrgA family PFY08_25230 PF01156 Inosine-uridine preferring nucleoside hydrolase PFY08_25235 PF03952 Enolase, N-terminal domain PFY08_25235 PF00113 Enolase, C-terminal TIM barrel domain PFY08_25240 PF06415 BPG-independent PGAM N-terminus (iPGM_N) PFY08_25240 PF01676 Metalloenzyme superfamily PFY08_25245 PF00121 Triosephosphate isomerase PFY08_25250 PF00162 Phosphoglycerate kinase PFY08_25255 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain PFY08_25255 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain PFY08_25260 PF04198 Putative sugar-binding domain PFY08_25270 PF00309 Sigma-54 factor, Activator interacting domain (AID) PFY08_25270 PF04963 Sigma-54 factor, core binding domain PFY08_25270 PF04552 Sigma-54, DNA binding domain PFY08_25290 PF03862 SpoVAC/SpoVAEB sporulation membrane protein PFY08_25295 PF07451 Stage V sporulation protein AD (SpoVAD) PFY08_25300 PF03862 SpoVAC/SpoVAEB sporulation membrane protein PFY08_25310 PF04239 Protein of unknown function (DUF421) PFY08_25315 PF00574 Clp protease PFY08_25320 PF00381 PTS HPr component phosphorylation site PFY08_25325 PF02650 WhiA C-terminal HTH domain PFY08_25325 PF14527 WhiA LAGLIDADG-like domain PFY08_25325 PF10298 WhiA N-terminal LAGLIDADG-like domain PFY08_25330 PF01933 Uncharacterised protein family UPF0052 PFY08_25335 PF03668 P-loop ATPase protein family PFY08_25340 PF00293 NUDIX domain PFY08_25350 PF07992 Pyridine nucleotide-disulphide oxidoreductase PFY08_25360 PF14602 Hexapeptide repeat of succinyl-transferase PFY08_25365 PF13419 Haloacid dehalogenase-like hydrolase PFY08_25370 PF01790 Prolipoprotein diacylglyceryl transferase PFY08_25375 PF07475 HPr Serine kinase C-terminal domain PFY08_25375 PF02603 HPr Serine kinase N terminus PFY08_25380 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV PFY08_25385 PF00005 ABC transporter PFY08_25385 PF17755 UvrA DNA-binding domain PFY08_25385 PF17760 UvrA interaction domain PFY08_25390 PF00271 Helicase conserved C-terminal domain PFY08_25390 PF04851 Type III restriction enzyme, res subunit PFY08_25390 PF02151 UvrB/uvrC motif PFY08_25390 PF12344 Ultra-violet resistance protein B PFY08_25390 PF17757 UvrB interaction domain PFY08_25405 PF13411 MerR HTH family regulatory protein PFY08_25405 PF07739 TipAS antibiotic-recognition domain PFY08_25420 PF03601 Conserved hypothetical protein 698 PFY08_25425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PFY08_25425 PF03466 LysR substrate binding domain PFY08_25430 PF09278 MerR, DNA binding PFY08_25430 PF00376 MerR family regulatory protein PFY08_25435 PF03358 NADPH-dependent FMN reductase PFY08_25440 PF16326 ABC transporter C-terminal domain PFY08_25440 PF00005 ABC transporter PFY08_25440 PF12848 ABC transporter PFY08_25445 PF01906 Putative heavy-metal-binding PFY08_25450 PF00005 ABC transporter PFY08_25450 PF00664 ABC transporter transmembrane region PFY08_25455 PF07859 alpha/beta hydrolase fold PFY08_25460 PF00797 N-acetyltransferase PFY08_25465 PF03466 LysR substrate binding domain PFY08_25465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PFY08_25470 PF17820 PDZ domain PFY08_25475 PF17820 PDZ domain PFY08_25475 PF03572 Peptidase family S41 PFY08_25475 PF01471 Putative peptidoglycan binding domain PFY08_25480 PF02687 FtsX-like permease family PFY08_25480 PF18075 FtsX extracellular domain PFY08_25485 PF00005 ABC transporter PFY08_25490 PF13442 Cytochrome C oxidase, cbb3-type, subunit III PFY08_25500 PF01043 SecA preprotein cross-linking domain PFY08_25500 PF07517 SecA DEAD-like domain PFY08_25500 PF07516 SecA Wing and Scaffold domain PFY08_25500 PF02810 SEC-C motif PFY08_25505 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus PFY08_25505 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein PFY08_25510 PF00313 'Cold-shock' DNA-binding domain PFY08_25520 PF04851 Type III restriction enzyme, res subunit PFY08_25520 PF00271 Helicase conserved C-terminal domain PFY08_25525 PF01476 LysM domain PFY08_25525 PF00877 NlpC/P60 family PFY08_25530 PF01638 HxlR-like helix-turn-helix PFY08_25535 PF02645 Uncharacterised protein, DegV family COG1307 PFY08_25540 PF01205 Uncharacterized protein family UPF0029 PFY08_25540 PF09186 Domain of unknown function (DUF1949) PFY08_25545 PF03816 Cell envelope-related transcriptional attenuator domain PFY08_25550 PF02350 UDP-N-acetylglucosamine 2-epimerase PFY08_25555 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain PFY08_25555 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain PFY08_25555 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain PFY08_25560 PF00953 Glycosyl transferase family 4 PFY08_25565 PF01522 Polysaccharide deacetylase PFY08_25570 PF03610 PTS system fructose IIA component PFY08_25570 PF00874 PRD domain PFY08_25570 PF00158 Sigma-54 interaction domain PFY08_25580 PF02417 Chromate transporter PFY08_25585 PF04794 YdjC-like protein PFY08_25590 PF11975 Family 4 glycosyl hydrolase C-terminal domain PFY08_25590 PF02056 Family 4 glycosyl hydrolase PFY08_25595 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit PFY08_25600 PF02378 Phosphotransferase system, EIIC PFY08_25605 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit PFY08_25615 PF02675 S-adenosylmethionine decarboxylase PFY08_25620 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit PFY08_25625 PF02378 Phosphotransferase system, EIIC PFY08_25630 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit PFY08_25635 PF00375 Sodium:dicarboxylate symporter family PFY08_25655 PF03466 LysR substrate binding domain PFY08_25655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PFY08_25670 PF01654 Cytochrome bd terminal oxidase subunit I PFY08_25675 PF02322 Cytochrome bd terminal oxidase subunit II PFY08_25680 PF02040 Arsenical pump membrane protein PFY08_25685 PF13667 ThiC-associated domain PFY08_25685 PF01964 Radical SAM ThiC family PFY08_25710 PF02652 L-lactate permease PFY08_25720 PF09988 Uncharacterized metal-binding protein (DUF2227) PFY08_25730 PF00884 Sulfatase PFY08_25740 PF01063 Amino-transferase class IV PFY08_25745 PF00877 NlpC/P60 family PFY08_25745 PF01476 LysM domain PFY08_25750 PF01773 Na+ dependent nucleoside transporter N-terminus PFY08_25750 PF07662 Na+ dependent nucleoside transporter C-terminus PFY08_25765 PF02028 BCCT, betaine/carnitine/choline family transporter PFY08_25770 PF01476 LysM domain PFY08_25770 PF06725 3D domain PFY08_25795 PF04434 SWIM zinc finger PFY08_25800 PF12419 SNF2 Helicase protein PFY08_25800 PF00176 SNF2 family N-terminal domain PFY08_25800 PF00271 Helicase conserved C-terminal domain PFY08_25830 PF04545 Sigma-70, region 4 PFY08_25830 PF04542 Sigma-70 region 2 PFY08_25840 PF02687 FtsX-like permease family PFY08_25840 PF12704 MacB-like periplasmic core domain PFY08_25845 PF00005 ABC transporter PFY08_25865 PF07690 Major Facilitator Superfamily PFY08_25880 PF16736 Single Cache-like PFY08_25880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PFY08_25880 PF00989 PAS fold PFY08_25880 PF00512 His Kinase A (phospho-acceptor) domain PFY08_25885 PF00486 Transcriptional regulatory protein, C terminal PFY08_25885 PF00072 Response regulator receiver domain PFY08_25895 PF03816 Cell envelope-related transcriptional attenuator domain PFY08_25900 PF16363 GDP-mannose 4,6 dehydratase PFY08_25905 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain PFY08_25905 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain PFY08_25905 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain PFY08_25910 PF00535 Glycosyl transferase family 2 PFY08_25935 PF02397 Bacterial sugar transferase PFY08_25940 PF00483 Nucleotidyl transferase PFY08_25950 PF13614 AAA domain PFY08_25955 PF02706 Chain length determinant protein PFY08_25955 PF13807 G-rich domain on putative tyrosine kinase PFY08_25965 PF13614 AAA domain PFY08_25970 PF07977 FabA-like domain PFY08_25980 PF12116 Stage III sporulation protein D PFY08_25990 PF01551 Peptidase family M23 PFY08_26000 PF00005 ABC transporter PFY08_26005 PF00005 ABC transporter PFY08_26010 PF08486 Stage II sporulation protein PFY08_26015 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) PFY08_26025 PF06612 Protein of unknown function (DUF1146) PFY08_26030 PF00361 Proton-conducting membrane transporter PFY08_26035 PF00361 Proton-conducting membrane transporter PFY08_26040 PF00361 Proton-conducting membrane transporter PFY08_26040 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus PFY08_26040 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus PFY08_26045 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L PFY08_26050 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 PFY08_26060 PF00146 NADH dehydrogenase PFY08_26065 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit PFY08_26070 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit PFY08_26075 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit PFY08_26080 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 PFY08_26085 PF03707 Bacterial signalling protein N terminal repeat PFY08_26085 PF00990 Diguanylate cyclase, GGDEF domain PFY08_26085 PF00563 EAL domain PFY08_26100 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain PFY08_26100 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain PFY08_26105 PF02874 ATP synthase alpha/beta family, beta-barrel domain PFY08_26105 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain PFY08_26110 PF00231 ATP synthase PFY08_26115 PF00306 ATP synthase alpha/beta chain, C terminal domain PFY08_26115 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain PFY08_26115 PF02874 ATP synthase alpha/beta family, beta-barrel domain PFY08_26120 PF00213 ATP synthase delta (OSCP) subunit PFY08_26125 PF00430 ATP synthase B/B' CF(0) PFY08_26130 PF00137 ATP synthase subunit C PFY08_26135 PF00119 ATP synthase A chain PFY08_26140 PF03899 ATP synthase I chain PFY08_26160 PF00464 Serine hydroxymethyltransferase PFY08_26165 PF04260 Protein of unknown function (DUF436) PFY08_26170 PF02502 Ribose/Galactose Isomerase PFY08_26175 PF01451 Low molecular weight phosphotyrosine protein phosphatase PFY08_26180 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 PFY08_26185 PF07681 DoxX PFY08_26190 PF01613 Flavin reductase like domain PFY08_26205 PF02659 Putative manganese efflux pump PFY08_26210 PF01300 Telomere recombination PFY08_26210 PF03481 Putative GTP-binding controlling metal-binding PFY08_26220 PF09551 Stage II sporulation protein R (spore_II_R) PFY08_26225 PF13847 Methyltransferase domain PFY08_26225 PF17827 PrmC N-terminal domain PFY08_26230 PF03462 PCRF domain PFY08_26230 PF00472 RF-1 domain PFY08_26235 PF00265 Thymidine kinase PFY08_26240 PF01197 Ribosomal protein L31 PFY08_26245 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain PFY08_26245 PF07498 Rho termination factor, N-terminal domain PFY08_26245 PF07497 Rho termination factor, RNA-binding domain PFY08_26250 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded PFY08_26255 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) PFY08_26260 PF01116 Fructose-bisphosphate aldolase class-II PFY08_26265 PF00072 Response regulator receiver domain PFY08_26270 PF10740 Domain of unknown function (DUF2529) PFY08_26275 PF06418 CTP synthase N-terminus PFY08_26275 PF00117 Glutamine amidotransferase class-I PFY08_26280 PF05066 HB1, ASXL, restriction endonuclease HTH domain PFY08_26290 PF02770 Acyl-CoA dehydrogenase, middle domain PFY08_26290 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PFY08_26290 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PFY08_26295 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PFY08_26295 PF02770 Acyl-CoA dehydrogenase, middle domain PFY08_26295 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PFY08_26300 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain PFY08_26300 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain PFY08_26305 PF02803 Thiolase, C-terminal domain PFY08_26305 PF00108 Thiolase, N-terminal domain PFY08_26310 PF13183 4Fe-4S dicluster domain PFY08_26310 PF02754 Cysteine-rich domain PFY08_26315 PF13091 PLD-like domain PFY08_26320 PF03851 UV-endonuclease UvdE PFY08_26325 PF00563 EAL domain PFY08_26325 PF00990 Diguanylate cyclase, GGDEF domain PFY08_26325 PF03707 Bacterial signalling protein N terminal repeat PFY08_26340 PF01447 Thermolysin metallopeptidase, catalytic domain PFY08_26340 PF02868 Thermolysin metallopeptidase, alpha-helical domain PFY08_26340 PF07504 Fungalysin/Thermolysin Propeptide Motif PFY08_26340 PF03413 Peptidase propeptide and YPEB domain PFY08_26345 PF00196 Bacterial regulatory proteins, luxR family PFY08_26345 PF00072 Response regulator receiver domain PFY08_26350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PFY08_26350 PF07730 Histidine kinase PFY08_26360 PF00005 ABC transporter PFY08_26365 PF00557 Metallopeptidase family M24 PFY08_26375 PF02225 PA domain PFY08_26375 PF04389 Peptidase family M28 PFY08_26400 PF03485 Arginyl tRNA synthetase N terminal domain PFY08_26400 PF05746 DALR anticodon binding domain PFY08_26400 PF00750 tRNA synthetases class I (R) PFY08_26405 PF09148 Domain of unknown function (DUF1934) PFY08_26410 PF02016 LD-carboxypeptidase N-terminal domain PFY08_26410 PF17676 LD-carboxypeptidase C-terminal domain PFY08_26425 PF00491 Arginase family PFY08_26430 PF17284 Spermidine synthase tetramerisation domain PFY08_26435 PF07690 Major Facilitator Superfamily PFY08_26440 PF13411 MerR HTH family regulatory protein PFY08_26445 PF03009 Glycerophosphoryl diester phosphodiesterase family PFY08_26450 PF00912 Transglycosylase PFY08_26450 PF00905 Penicillin binding protein transpeptidase domain PFY08_26455 PF08741 YwhD family PFY08_26460 PF02163 Peptidase family M50 PFY08_26465 PF01361 Tautomerase enzyme PFY08_26470 PF01966 HD domain PFY08_26475 PF01497 Periplasmic binding protein PFY08_26480 PF00005 ABC transporter PFY08_26485 PF01032 FecCD transport family PFY08_26490 PF01032 FecCD transport family PFY08_26495 PF07293 Protein of unknown function (DUF1450) PFY08_26505 PF03099 Biotin/lipoate A/B protein ligase family PFY08_26510 PF01515 Phosphate acetyl/butaryl transferase PFY08_26515 PF06778 Chlorite dismutase PFY08_26520 PF00768 D-alanyl-D-alanine carboxypeptidase PFY08_26520 PF07943 Penicillin-binding protein 5, C-terminal domain PFY08_26525 PF07486 Cell Wall Hydrolase PFY08_26530 PF09671 Spore coat protein (Spore_GerQ) PFY08_26535 PF04241 Protein of unknown function (DUF423) PFY08_26545 PF02254 TrkA-N domain PFY08_26545 PF07885 Ion channel PFY08_26550 PF00860 Permease family PFY08_26560 PF12823 Domain of unknown function (DUF3817) PFY08_26565 PF03167 Uracil DNA glycosylase superfamily PFY08_26570 PF12679 ABC-2 family transporter protein PFY08_26575 PF00005 ABC transporter PFY08_26580 PF13472 GDSL-like Lipase/Acylhydrolase family PFY08_26585 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family PFY08_26585 PF00356 Bacterial regulatory proteins, lacI family PFY08_26595 PF00742 Homoserine dehydrogenase PFY08_26595 PF03447 Homoserine dehydrogenase, NAD binding domain PFY08_26595 PF01842 ACT domain PFY08_26600 PF04204 Homoserine O-succinyltransferase PFY08_26605 PF01053 Cys/Met metabolism PLP-dependent enzyme PFY08_26615 PF13419 Haloacid dehalogenase-like hydrolase PFY08_26620 PF00027 Cyclic nucleotide-binding domain PFY08_26625 PF02525 Flavodoxin-like fold PFY08_26630 PF00196 Bacterial regulatory proteins, luxR family PFY08_26630 PF00072 Response regulator receiver domain PFY08_26635 PF07730 Histidine kinase PFY08_26635 PF13185 GAF domain PFY08_26640 PF08543 Phosphomethylpyrimidine kinase PFY08_26645 PF00990 Diguanylate cyclase, GGDEF domain PFY08_26645 PF07694 5TMR of 5TMR-LYT PFY08_26650 PF04328 Selenoprotein, putative PFY08_26655 PF13722 5TM C-terminal transporter carbon starvation CstA PFY08_26655 PF02554 Carbon starvation protein CstA PFY08_26660 PF04397 LytTr DNA-binding domain PFY08_26660 PF00072 Response regulator receiver domain PFY08_26665 PF07690 Major Facilitator Superfamily PFY08_26670 PF03808 Glycosyl transferase WecB/TagA/CpsF family PFY08_26675 PF13439 Glycosyltransferase Family 4 PFY08_26675 PF00534 Glycosyl transferases group 1 PFY08_26685 PF03458 UPF0126 domain PFY08_26690 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PFY08_26700 PF03061 Thioesterase superfamily PFY08_26710 PF00535 Glycosyl transferase family 2 PFY08_26725 PF00535 Glycosyl transferase family 2 PFY08_26730 PF12848 ABC transporter PFY08_26730 PF00005 ABC transporter PFY08_26735 PF03062 MBOAT, membrane-bound O-acyltransferase family PFY08_26745 PF00440 Bacterial regulatory proteins, tetR family PFY08_26750 PF00873 AcrB/AcrD/AcrF family PFY08_26755 PF01641 SelR domain PFY08_26765 PF01594 AI-2E family transporter PFY08_26770 PF04172 LrgB-like family PFY08_26775 PF03788 LrgA family PFY08_26780 PF04397 LytTr DNA-binding domain PFY08_26780 PF00072 Response regulator receiver domain PFY08_26785 PF13492 GAF domain PFY08_26785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PFY08_26785 PF07694 5TMR of 5TMR-LYT PFY08_26785 PF06580 Histidine kinase PFY08_26790 PF07690 Major Facilitator Superfamily PFY08_26795 PF02028 BCCT, betaine/carnitine/choline family transporter PFY08_26800 PF02898 Nitric oxide synthase, oxygenase domain PFY08_26805 PF02777 Iron/manganese superoxide dismutases, C-terminal domain PFY08_26805 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain PFY08_26815 PF02293 AmiS/UreI family transporter PFY08_26820 PF16363 GDP-mannose 4,6 dehydratase PFY08_26825 PF03006 Haemolysin-III related PFY08_26835 PF03880 DbpA RNA binding domain PFY08_26835 PF00271 Helicase conserved C-terminal domain PFY08_26835 PF00270 DEAD/DEAH box helicase PFY08_26840 PF00478 IMP dehydrogenase / GMP reductase domain PFY08_26845 PF08439 Oligopeptidase F PFY08_26845 PF01432 Peptidase family M3 PFY08_26855 PF13426 PAS domain PFY08_26855 PF13188 PAS domain PFY08_26855 PF00989 PAS fold PFY08_26855 PF00512 His Kinase A (phospho-acceptor) domain PFY08_26855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PFY08_26860 PF02590 Predicted SPOUT methyltransferase PFY08_26870 PF13180 PDZ domain PFY08_26875 PF00753 Metallo-beta-lactamase superfamily PFY08_26880 PF09648 YycH protein PFY08_26890 PF00672 HAMP domain PFY08_26890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PFY08_26890 PF00512 His Kinase A (phospho-acceptor) domain PFY08_26890 PF13426 PAS domain PFY08_26895 PF00486 Transcriptional regulatory protein, C terminal PFY08_26895 PF00072 Response regulator receiver domain PFY08_26920 PF00709 Adenylosuccinate synthetase PFY08_26925 PF00772 DnaB-like helicase N terminal domain PFY08_26925 PF03796 DnaB-like helicase C terminal domain PFY08_26930 PF03948 Ribosomal protein L9, C-terminal domain PFY08_26930 PF01281 Ribosomal protein L9, N-terminal domain PFY08_26935 PF01368 DHH family PFY08_26935 PF02272 DHHA1 domain PFY08_26940 PF09991 Predicted membrane protein (DUF2232) PFY08_26945 PF01084 Ribosomal protein S18 PFY08_26950 PF00436 Single-strand binding protein family PFY08_26955 PF01250 Ribosomal protein S6 PFY08_26960 PF06071 Protein of unknown function (DUF933) PFY08_26960 PF01926 50S ribosome-binding GTPase PFY08_26965 PF06107 Bacterial protein of unknown function (DUF951) PFY08_26970 PF00924 Mechanosensitive ion channel PFY08_26975 PF06866 Protein of unknown function (DUF1256) PFY08_26980 PF17762 HTH domain found in ParB protein PFY08_26980 PF02195 ParB-like nuclease domain PFY08_26985 PF13614 AAA domain PFY08_26990 PF02195 ParB-like nuclease domain PFY08_26990 PF17762 HTH domain found in ParB protein PFY08_26995 PF02527 rRNA small subunit methyltransferase G PFY08_27000 PF01134 Glucose inhibited division protein A PFY08_27000 PF13932 GidA associated domain PFY08_27005 PF01926 50S ribosome-binding GTPase PFY08_27005 PF12631 MnmE helical domain PFY08_27005 PF10396 GTP-binding protein TrmE N-terminus PFY08_27010 PF14804 Jag N-terminus PFY08_27010 PF01424 R3H domain PFY08_27015 PF02096 60Kd inner membrane protein PFY08_27020 PF00825 Ribonuclease P PFY08_27025 PF00468 Ribosomal protein L34