locus-tag class description BCQ_0001 PF11638 DnaA N-terminal domain BCQ_0001 PF08299 Bacterial dnaA protein helix-turn-helix BCQ_0001 PF00308 Bacterial dnaA protein BCQ_0002 PF00712 DNA polymerase III beta subunit, N-terminal domain BCQ_0002 PF02767 DNA polymerase III beta subunit, central domain BCQ_0002 PF02768 DNA polymerase III beta subunit, C-terminal domain BCQ_0004 PF02463 RecF/RecN/SMC N terminal domain BCQ_0005 PF00204 DNA gyrase B BCQ_0005 PF00986 DNA gyrase B subunit, carboxyl terminus BCQ_0005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCQ_0005 PF01751 Toprim domain BCQ_0006 PF00521 DNA gyrase/topoisomerase IV, subunit A BCQ_0006 PF03989 DNA gyrase C-terminal domain, beta-propeller BCQ_0013 PF14175 YaaC-like Protein BCQ_0014 PF00571 CBS domain BCQ_0014 PF00478 IMP dehydrogenase / GMP reductase domain BCQ_0015 PF00768 D-alanyl-D-alanine carboxypeptidase BCQ_0015 PF07943 Penicillin-binding protein 5, C-terminal domain BCQ_0016 PF01680 SOR/SNZ family BCQ_0017 PF01174 SNO glutamine amidotransferase family BCQ_0018 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BCQ_0018 PF02403 Seryl-tRNA synthetase N-terminal domain BCQ_0021 PF01712 Deoxynucleoside kinase BCQ_0022 PF01712 Deoxynucleoside kinase BCQ_0023 PF00857 Isochorismatase family BCQ_0024 PF14437 MafB19-like deaminase BCQ_0025 PF12169 DNA polymerase III subunits gamma and tau domain III BCQ_0026 PF12169 DNA polymerase III subunits gamma and tau domain III BCQ_0027 PF02575 YbaB/EbfC DNA-binding family BCQ_0028 PF13662 Toprim domain BCQ_0028 PF02132 RecR protein BCQ_0029 PF10704 Protein of unknown function (DUF2508) BCQ_0030 PF07441 SigmaK-factor processing regulatory protein BofA BCQ_0036 PF01276 Orn/Lys/Arg decarboxylase, major domain BCQ_0036 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain BCQ_0037 PF02223 Thymidylate kinase BCQ_0038 PF09115 DNA polymerase III, delta subunit, C terminal BCQ_0039 PF04468 PSP1 C-terminal conserved region BCQ_0040 PF06156 Initiation control protein YabA BCQ_0041 PF05175 Methyltransferase small domain BCQ_0042 PF01541 GIY-YIG catalytic domain BCQ_0043 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BCQ_0044 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin BCQ_0044 PF18277 AbrB C-terminal domain BCQ_0045 PF08264 Anticodon-binding domain of tRNA BCQ_0045 PF09334 tRNA synthetases class I (M) BCQ_0045 PF01588 Putative tRNA binding domain BCQ_0046 PF01026 TatD related DNase BCQ_0047 PF13331 Domain of unknown function (DUF4093) BCQ_0047 PF13662 Toprim domain BCQ_0048 PF00398 Ribosomal RNA adenine dimethylase BCQ_0049 PF05582 YabG peptidase U57 BCQ_0050 PF06257 Biofilm formation stimulator VEG BCQ_0051 PF00269 Small, acid-soluble spore proteins, alpha/beta type BCQ_0052 PF00288 GHMP kinases N terminal domain BCQ_0052 PF08544 GHMP kinases C terminal BCQ_0053 PF09182 Bacterial purine repressor, N-terminal BCQ_0053 PF00156 Phosphoribosyl transferase domain BCQ_0054 PF01042 Endoribonuclease L-PSP BCQ_0055 PF04026 SpoVG BCQ_0056 PF00132 Bacterial transferase hexapeptide (six repeats) BCQ_0056 PF00483 Nucleotidyl transferase BCQ_0057 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase BCQ_0057 PF14572 Phosphoribosyl synthetase-associated domain BCQ_0058 PF01195 Peptidyl-tRNA hydrolase BCQ_0060 PF17757 UvrB interaction domain BCQ_0060 PF03461 TRCF domain BCQ_0060 PF00271 Helicase conserved C-terminal domain BCQ_0060 PF00270 DEAD/DEAH box helicase BCQ_0060 PF02559 CarD-like/TRCF domain BCQ_0061 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin BCQ_0061 PF15714 Stage V sporulation protein T C-terminal, transcription factor BCQ_0062 PF14667 Polysaccharide biosynthesis C-terminal domain BCQ_0062 PF01943 Polysaccharide biosynthesis protein BCQ_0063 PF03819 MazG nucleotide pyrophosphohydrolase domain BCQ_0063 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BCQ_0064 PF01479 S4 domain BCQ_0065 PF07873 YabP family BCQ_0066 PF09578 Spore cortex protein YabQ (Spore_YabQ) BCQ_0068 PF00575 S1 RNA binding domain BCQ_0071 PF07228 Stage II sporulation protein E (SpoIIE) BCQ_0072 PF11734 TilS substrate C-terminal domain BCQ_0072 PF01171 PP-loop family BCQ_0072 PF09179 TilS substrate binding domain BCQ_0074 PF01434 Peptidase family M41 BCQ_0074 PF06480 FtsH Extracellular BCQ_0074 PF17862 AAA+ lid domain BCQ_0074 PF00004 ATPase family associated with various cellular activities (AAA) BCQ_0075 PF03309 Type III pantothenate kinase BCQ_0076 PF01430 Hsp33 protein BCQ_0077 PF00291 Pyridoxal-phosphate dependent enzyme BCQ_0078 PF00425 chorismate binding enzyme BCQ_0078 PF04715 Anthranilate synthase component I, N terminal region BCQ_0079 PF00117 Glutamine amidotransferase class-I BCQ_0080 PF01063 Amino-transferase class IV BCQ_0081 PF00809 Pterin binding enzyme BCQ_0082 PF02152 Dihydroneopterin aldolase BCQ_0083 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) BCQ_0084 PF01381 Helix-turn-helix BCQ_0085 PF01207 Dihydrouridine synthase (Dus) BCQ_0086 PF01336 OB-fold nucleic acid binding domain BCQ_0086 PF00152 tRNA synthetases class II (D, K and N) BCQ_0092 PF05848 CtsR N-terminal HTH domain BCQ_0092 PF17727 CtsR C-terminal dimerization domain BCQ_0093 PF02151 UvrB/uvrC motif BCQ_0094 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain BCQ_0095 PF02861 Clp amino terminal domain, pathogenicity island component BCQ_0095 PF10431 C-terminal, D2-small domain, of ClpB protein BCQ_0095 PF17871 AAA lid domain BCQ_0095 PF07724 AAA domain (Cdc48 subfamily) BCQ_0095 PF00004 ATPase family associated with various cellular activities (AAA) BCQ_0096 PF18073 Rubredoxin metal binding domain BCQ_0097 PF02457 DisA bacterial checkpoint controller nucleotide-binding BCQ_0097 PF10635 DisA bacterial checkpoint controller linker region BCQ_0099 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase BCQ_0100 PF02542 YgbB family BCQ_0101 PF00749 tRNA synthetases class I (E and Q), catalytic domain BCQ_0102 PF06426 Serine acetyltransferase, N-terminal BCQ_0102 PF00132 Bacterial transferase hexapeptide (six repeats) BCQ_0103 PF01406 tRNA synthetases class I (C) catalytic domain BCQ_0103 PF09190 DALR domain BCQ_0104 PF00636 Ribonuclease III domain BCQ_0105 PF08032 RNA 2'-O ribose methyltransferase substrate binding BCQ_0105 PF00588 SpoU rRNA Methylase family BCQ_0106 PF05991 YacP-like NYN domain BCQ_0107 PF08281 Sigma-70, region 4 BCQ_0107 PF04542 Sigma-70 region 2 BCQ_0108 PF00584 SecE/Sec61-gamma subunits of protein translocation complex BCQ_0109 PF00467 KOW motif BCQ_0109 PF02357 Transcription termination factor nusG BCQ_0110 PF03946 Ribosomal protein L11, N-terminal domain BCQ_0110 PF00298 Ribosomal protein L11, RNA binding domain BCQ_0111 PF00687 Ribosomal protein L1p/L10e family BCQ_0112 PF00466 Ribosomal protein L10 BCQ_0113 PF16320 Ribosomal protein L7/L12 dimerisation domain BCQ_0113 PF00542 Ribosomal protein L7/L12 C-terminal domain BCQ_0114 PF05175 Methyltransferase small domain BCQ_0115 PF10385 RNA polymerase beta subunit external 1 domain BCQ_0115 PF04565 RNA polymerase Rpb2, domain 3 BCQ_0115 PF04561 RNA polymerase Rpb2, domain 2 BCQ_0115 PF04563 RNA polymerase beta subunit BCQ_0115 PF04560 RNA polymerase Rpb2, domain 7 BCQ_0115 PF00562 RNA polymerase Rpb2, domain 6 BCQ_0116 PF00623 RNA polymerase Rpb1, domain 2 BCQ_0116 PF04983 RNA polymerase Rpb1, domain 3 BCQ_0116 PF05000 RNA polymerase Rpb1, domain 4 BCQ_0116 PF04998 RNA polymerase Rpb1, domain 5 BCQ_0116 PF04997 RNA polymerase Rpb1, domain 1 BCQ_0117 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family BCQ_0118 PF00164 Ribosomal protein S12/S23 BCQ_0119 PF00177 Ribosomal protein S7p/S5e BCQ_0120 PF00009 Elongation factor Tu GTP binding domain BCQ_0120 PF03764 Elongation factor G, domain IV BCQ_0120 PF03144 Elongation factor Tu domain 2 BCQ_0120 PF14492 Elongation Factor G, domain II BCQ_0120 PF00679 Elongation factor G C-terminus BCQ_0121 PF03143 Elongation factor Tu C-terminal domain BCQ_0121 PF03144 Elongation factor Tu domain 2 BCQ_0121 PF00009 Elongation factor Tu GTP binding domain BCQ_0122 PF00338 Ribosomal protein S10p/S20e BCQ_0123 PF00297 Ribosomal protein L3 BCQ_0124 PF00573 Ribosomal protein L4/L1 family BCQ_0125 PF00276 Ribosomal protein L23 BCQ_0126 PF03947 Ribosomal Proteins L2, C-terminal domain BCQ_0126 PF00181 Ribosomal Proteins L2, RNA binding domain BCQ_0127 PF00203 Ribosomal protein S19 BCQ_0128 PF00237 Ribosomal protein L22p/L17e BCQ_0129 PF00189 Ribosomal protein S3, C-terminal domain BCQ_0129 PF07650 KH domain BCQ_0130 PF00252 Ribosomal protein L16p/L10e BCQ_0131 PF00831 Ribosomal L29 protein BCQ_0132 PF00366 Ribosomal protein S17 BCQ_0133 PF00238 Ribosomal protein L14p/L23e BCQ_0134 PF00467 KOW motif BCQ_0134 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 BCQ_0135 PF00281 Ribosomal protein L5 BCQ_0135 PF00673 ribosomal L5P family C-terminus BCQ_0136 PF00253 Ribosomal protein S14p/S29e BCQ_0137 PF00410 Ribosomal protein S8 BCQ_0138 PF00347 Ribosomal protein L6 BCQ_0139 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast BCQ_0140 PF00333 Ribosomal protein S5, N-terminal domain BCQ_0140 PF03719 Ribosomal protein S5, C-terminal domain BCQ_0141 PF00327 Ribosomal protein L30p/L7e BCQ_0142 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A BCQ_0143 PF00344 SecY translocase BCQ_0144 PF05191 Adenylate kinase, active site lid BCQ_0145 PF00557 Metallopeptidase family M24 BCQ_0146 PF01176 Translation initiation factor 1A / IF-1 BCQ_0147 PF00444 Ribosomal protein L36 BCQ_0148 PF00416 Ribosomal protein S13/S18 BCQ_0149 PF00411 Ribosomal protein S11 BCQ_0150 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain BCQ_0150 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain BCQ_0150 PF01000 RNA polymerase Rpb3/RpoA insert domain BCQ_0151 PF01196 Ribosomal protein L17 BCQ_0152 PF00005 ABC transporter BCQ_0153 PF00005 ABC transporter BCQ_0154 PF02361 Cobalt transport protein BCQ_0155 PF01416 tRNA pseudouridine synthase BCQ_0156 PF00572 Ribosomal protein L13 BCQ_0157 PF00380 Ribosomal protein S9/S16 BCQ_0159 PF01520 N-acetylmuramoyl-L-alanine amidase BCQ_0160 PF10609 NUBPL iron-transfer P-loop NTPase BCQ_0161 PF17898 Spore germination GerD central core domain BCQ_0162 PF14089 KinB-signalling pathway activation in sporulation BCQ_0163 PF01522 Polysaccharide deacetylase BCQ_0178 PF02595 Glycerate kinase family BCQ_0179 PF00491 Arginase family BCQ_0180 PF02457 DisA bacterial checkpoint controller nucleotide-binding BCQ_0181 PF07949 YbbR-like protein BCQ_0182 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BCQ_0182 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BCQ_0182 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BCQ_0182 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BCQ_0183 PF01380 SIS domain BCQ_0184 PF00561 alpha/beta hydrolase fold BCQ_0185 PF00392 Bacterial regulatory proteins, gntR family BCQ_0185 PF07729 FCD domain BCQ_0186 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BCQ_0186 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BCQ_0187 PF02447 GntP family permease BCQ_0188 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BCQ_0188 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain BCQ_0189 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region BCQ_0189 PF00326 Prolyl oligopeptidase family BCQ_0196 PF00528 Binding-protein-dependent transport system inner membrane component BCQ_0197 PF09383 NIL domain BCQ_0197 PF00005 ABC transporter BCQ_0198 PF03180 NLPA lipoprotein BCQ_0201 PF01565 FAD binding domain BCQ_0202 PF07690 Major Facilitator Superfamily BCQ_0204 PF07690 Major Facilitator Superfamily BCQ_0208 PF00528 Binding-protein-dependent transport system inner membrane component BCQ_0209 PF00528 Binding-protein-dependent transport system inner membrane component BCQ_0209 PF12911 N-terminal TM domain of oligopeptide transport permease C BCQ_0210 PF00005 ABC transporter BCQ_0210 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BCQ_0211 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BCQ_0211 PF00005 ABC transporter BCQ_0212 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BCQ_0214 PF12833 Helix-turn-helix domain BCQ_0215 PF00440 Bacterial regulatory proteins, tetR family BCQ_0217 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BCQ_0218 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BCQ_0219 PF00248 Aldo/keto reductase family BCQ_0220 PF14748 Pyrroline-5-carboxylate reductase dimerisation BCQ_0220 PF03807 NADP oxidoreductase coenzyme F420-dependent BCQ_0221 PF04973 Nicotinamide mononucleotide transporter BCQ_0222 PF06800 Sugar transport protein BCQ_0223 PF00528 Binding-protein-dependent transport system inner membrane component BCQ_0225 PF12727 PBP superfamily domain BCQ_0225 PF12728 Helix-turn-helix domain BCQ_0228 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BCQ_0228 PF03466 LysR substrate binding domain BCQ_0229 PF00892 EamA-like transporter family BCQ_0230 PF14142 YrzO-like protein BCQ_0233 PF01553 Acyltransferase BCQ_0235 PF00356 Bacterial regulatory proteins, lacI family BCQ_0235 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BCQ_0236 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BCQ_0236 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BCQ_0238 PF01026 TatD related DNase BCQ_0239 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) BCQ_0244 PF00005 ABC transporter BCQ_0244 PF16326 ABC transporter C-terminal domain BCQ_0244 PF12848 ABC transporter BCQ_0246 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BCQ_0247 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BCQ_0248 PF00528 Binding-protein-dependent transport system inner membrane component BCQ_0249 PF00528 Binding-protein-dependent transport system inner membrane component BCQ_0249 PF12911 N-terminal TM domain of oligopeptide transport permease C BCQ_0250 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BCQ_0250 PF00005 ABC transporter BCQ_0251 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BCQ_0251 PF00005 ABC transporter BCQ_0256 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BCQ_0257 PF01557 Fumarylacetoacetate (FAA) hydrolase family BCQ_0259 PF13520 Amino acid permease BCQ_0260 PF07690 Major Facilitator Superfamily BCQ_0261 PF07478 D-ala D-ala ligase C-terminus BCQ_0261 PF01820 D-ala D-ala ligase N-terminus BCQ_0262 PF02875 Mur ligase family, glutamate ligase domain BCQ_0262 PF08245 Mur ligase middle domain BCQ_0262 PF01225 Mur ligase family, catalytic domain BCQ_0263 PF00271 Helicase conserved C-terminal domain BCQ_0263 PF00270 DEAD/DEAH box helicase BCQ_0264 PF03851 UV-endonuclease UvdE BCQ_0265 PF01694 Rhomboid family BCQ_0266 PF01648 4'-phosphopantetheinyl transferase superfamily BCQ_0268 PF01168 Alanine racemase, N-terminal domain BCQ_0268 PF00842 Alanine racemase, C-terminal domain BCQ_0269 PF01402 Ribbon-helix-helix protein, copG family BCQ_0270 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system BCQ_0271 PF16921 Tex protein YqgF-like domain BCQ_0271 PF09371 Tex-like protein N-terminal domain BCQ_0271 PF00575 S1 RNA binding domain BCQ_0271 PF17674 HHH domain BCQ_0272 PF17283 SprT-like zinc ribbon domain BCQ_0272 PF10263 SprT-like family BCQ_0290 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE BCQ_0291 PF00814 Glycoprotease family BCQ_0292 PF00583 Acetyltransferase (GNAT) family BCQ_0293 PF00814 Glycoprotease family BCQ_0294 PF16326 ABC transporter C-terminal domain BCQ_0294 PF12848 ABC transporter BCQ_0294 PF00005 ABC transporter BCQ_0295 PF02629 CoA binding domain BCQ_0295 PF06971 Putative DNA-binding protein N-terminus BCQ_0296 PF02517 CPBP intramembrane metalloprotease BCQ_0297 PF00166 Chaperonin 10 Kd subunit BCQ_0298 PF00118 TCP-1/cpn60 chaperonin family BCQ_0299 PF02540 NAD synthase BCQ_0299 PF00958 GMP synthase C terminal domain BCQ_0299 PF00117 Glutamine amidotransferase class-I BCQ_0300 PF00860 Permease family BCQ_0301 PF00486 Transcriptional regulatory protein, C terminal BCQ_0301 PF00072 Response regulator receiver domain BCQ_0302 PF00989 PAS fold BCQ_0302 PF00512 His Kinase A (phospho-acceptor) domain BCQ_0302 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCQ_0302 PF16736 Single Cache-like BCQ_0313 PF05045 Rhamnan synthesis protein F BCQ_0313 PF14307 Glycosyltransferase WbsX BCQ_0315 PF08241 Methyltransferase domain BCQ_0319 PF00535 Glycosyl transferase family 2 BCQ_0324 PF00392 Bacterial regulatory proteins, gntR family BCQ_0324 PF00155 Aminotransferase class I and II BCQ_0325 PF01619 Proline dehydrogenase BCQ_0331 PF00892 EamA-like transporter family BCQ_0333 PF13333 Integrase core domain BCQ_0333 PF00665 Integrase core domain BCQ_0333 PF13276 HTH-like domain BCQ_0340 PF00731 AIR carboxylase BCQ_0341 PF02222 ATP-grasp domain BCQ_0341 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain BCQ_0342 PF10397 Adenylosuccinate lyase C-terminus BCQ_0342 PF00206 Lyase BCQ_0343 PF01259 SAICAR synthetase BCQ_0344 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase BCQ_0346 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain BCQ_0346 PF02769 AIR synthase related protein, C-terminal domain BCQ_0346 PF00586 AIR synthase related protein, N-terminal domain BCQ_0347 PF00156 Phosphoribosyl transferase domain BCQ_0348 PF00586 AIR synthase related protein, N-terminal domain BCQ_0348 PF02769 AIR synthase related protein, C-terminal domain BCQ_0349 PF00551 Formyl transferase BCQ_0350 PF01808 AICARFT/IMPCHase bienzyme BCQ_0350 PF02142 MGS-like domain BCQ_0351 PF02844 Phosphoribosylglycinamide synthetase, N domain BCQ_0351 PF02843 Phosphoribosylglycinamide synthetase, C domain BCQ_0351 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain BCQ_0355 PF01884 PcrB family BCQ_0356 PF00580 UvrD/REP helicase N-terminal domain BCQ_0356 PF13361 UvrD-like helicase C-terminal domain BCQ_0357 PF12826 Helix-hairpin-helix motif BCQ_0357 PF00533 BRCA1 C Terminus (BRCT) domain BCQ_0357 PF01653 NAD-dependent DNA ligase adenylation domain BCQ_0357 PF03120 NAD-dependent DNA ligase OB-fold domain BCQ_0357 PF03119 NAD-dependent DNA ligase C4 zinc finger domain BCQ_0358 PF07537 CamS sex pheromone cAM373 precursor BCQ_0359 PF01925 Sulfite exporter TauE/SafE BCQ_0360 PF00171 Aldehyde dehydrogenase family BCQ_0362 PF00857 Isochorismatase family BCQ_0363 PF09383 NIL domain BCQ_0363 PF00005 ABC transporter BCQ_0364 PF00528 Binding-protein-dependent transport system inner membrane component BCQ_0365 PF03180 NLPA lipoprotein BCQ_0367 PF17886 HSP20-like domain found in ArsA BCQ_0367 PF02374 Anion-transporting ATPase BCQ_0368 PF01047 MarR family BCQ_0369 PF05360 yiaA/B two helix domain BCQ_0370 PF02686 Glu-tRNAGln amidotransferase C subunit BCQ_0371 PF01425 Amidase BCQ_0372 PF02637 GatB domain BCQ_0372 PF02934 GatB/GatE catalytic domain BCQ_0373 PF00781 Diacylglycerol kinase catalytic domain BCQ_0375 PF13419 Haloacid dehalogenase-like hydrolase BCQ_0376 PF00202 Aminotransferase class-III BCQ_0377 PF00158 Sigma-54 interaction domain BCQ_0378 PF00171 Aldehyde dehydrogenase family BCQ_0379 PF00893 Small Multidrug Resistance protein BCQ_0380 PF02073 Thermophilic metalloprotease (M29) BCQ_0382 PF01773 Na+ dependent nucleoside transporter N-terminus BCQ_0382 PF07662 Na+ dependent nucleoside transporter C-terminus BCQ_0382 PF07670 Nucleoside recognition BCQ_0383 PF01938 TRAM domain BCQ_0383 PF02475 Met-10+ like-protein BCQ_0383 PF05958 tRNA (Uracil-5-)-methyltransferase BCQ_0384 PF01207 Dihydrouridine synthase (Dus) BCQ_0385 PF00990 Diguanylate cyclase, GGDEF domain BCQ_0385 PF00563 EAL domain BCQ_0385 PF03707 Bacterial signalling protein N terminal repeat BCQ_0386 PF00205 Thiamine pyrophosphate enzyme, central domain BCQ_0386 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BCQ_0386 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BCQ_0388 PF07308 Protein of unknown function (DUF1456) BCQ_0392 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BCQ_0392 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BCQ_0393 PF02913 FAD linked oxidases, C-terminal domain BCQ_0393 PF01565 FAD binding domain BCQ_0394 PF01546 Peptidase family M20/M25/M40 BCQ_0394 PF07687 Peptidase dimerisation domain BCQ_0397 PF00665 Integrase core domain BCQ_0397 PF02796 Helix-turn-helix domain of resolvase BCQ_0398 PF01695 IstB-like ATP binding protein BCQ_0399 PF18801 response regulator aspartate phosphatase H, N terminal BCQ_0400 PF02403 Seryl-tRNA synthetase N-terminal domain BCQ_0400 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BCQ_0401 PF00578 AhpC/TSA family BCQ_0402 PF00550 Phosphopantetheine attachment site BCQ_0402 PF00668 Condensation domain BCQ_0402 PF13193 AMP-binding enzyme C-terminal domain BCQ_0402 PF00501 AMP-binding enzyme BCQ_0403 PF07690 Major Facilitator Superfamily BCQ_0404 PF13333 Integrase core domain BCQ_0404 PF13276 HTH-like domain BCQ_0404 PF00665 Integrase core domain BCQ_0406 PF07308 Protein of unknown function (DUF1456) BCQ_0409 PF13378 Enolase C-terminal domain-like BCQ_0409 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BCQ_0412 PF07687 Peptidase dimerisation domain BCQ_0412 PF01546 Peptidase family M20/M25/M40 BCQ_0414 PF13192 Thioredoxin domain BCQ_0414 PF07992 Pyridine nucleotide-disulphide oxidoreductase BCQ_0415 PF00578 AhpC/TSA family BCQ_0416 PF01636 Phosphotransferase enzyme family BCQ_0418 PF00596 Class II Aldolase and Adducin N-terminal domain BCQ_0421 PF01032 FecCD transport family BCQ_0422 PF01032 FecCD transport family BCQ_0423 PF01497 Periplasmic binding protein BCQ_0424 PF07992 Pyridine nucleotide-disulphide oxidoreductase BCQ_0426 PF12728 Helix-turn-helix domain BCQ_0434 PF10127 RNA repair pathway DNA polymerase beta family BCQ_0435 PF07690 Major Facilitator Superfamily BCQ_0436 PF01266 FAD dependent oxidoreductase BCQ_0436 PF00355 Rieske [2Fe-2S] domain BCQ_0438 PF00535 Glycosyl transferase family 2 BCQ_0440 PF00072 Response regulator receiver domain BCQ_0441 PF00528 Binding-protein-dependent transport system inner membrane component BCQ_0442 PF00497 Bacterial extracellular solute-binding proteins, family 3 BCQ_0443 PF00005 ABC transporter BCQ_0444 PF02743 Cache domain BCQ_0444 PF00672 HAMP domain BCQ_0444 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BCQ_0445 PF00128 Alpha amylase, catalytic domain BCQ_0445 PF16657 Maltogenic Amylase, C-terminal domain BCQ_0446 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BCQ_0446 PF00367 phosphotransferase system, EIIB BCQ_0446 PF02378 Phosphotransferase system, EIIC BCQ_0447 PF03372 Endonuclease/Exonuclease/phosphatase family BCQ_0448 PF01061 ABC-2 type transporter BCQ_0449 PF01751 Toprim domain BCQ_0449 PF01131 DNA topoisomerase BCQ_0450 PF03551 Transcriptional regulator PadR-like family BCQ_0451 PF12704 MacB-like periplasmic core domain BCQ_0451 PF02687 FtsX-like permease family BCQ_0452 PF00005 ABC transporter BCQ_0457 PF00005 ABC transporter BCQ_0457 PF03459 TOBE domain BCQ_0460 PF01751 Toprim domain BCQ_0460 PF01131 DNA topoisomerase BCQ_0461 PF02110 Hydroxyethylthiazole kinase family BCQ_0462 PF02581 Thiamine monophosphate synthase BCQ_0464 PF03605 Anaerobic c4-dicarboxylate membrane transporter BCQ_0465 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BCQ_0465 PF00672 HAMP domain BCQ_0466 PF01910 Thiamine-binding protein BCQ_0467 PF00528 Binding-protein-dependent transport system inner membrane component BCQ_0469 PF00005 ABC transporter BCQ_0471 PF00005 ABC transporter BCQ_0471 PF12848 ABC transporter BCQ_0472 PF00704 Glycosyl hydrolases family 18 BCQ_0472 PF00041 Fibronectin type III domain BCQ_0477 PF00440 Bacterial regulatory proteins, tetR family BCQ_0477 PF08360 QacR-like protein, C-terminal region BCQ_0481 PF11700 Vacuole effluxer Atg22 like BCQ_0484 PF09180 Prolyl-tRNA synthetase, C-terminal BCQ_0484 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BCQ_0484 PF03129 Anticodon binding domain BCQ_0486 PF00480 ROK family BCQ_0487 PF02342 TerD domain BCQ_0488 PF02342 TerD domain BCQ_0489 PF02342 TerD domain BCQ_0490 PF03741 Integral membrane protein TerC family BCQ_0491 PF14266 Putative component of 'biosynthetic module' BCQ_0492 PF05816 Toxic anion resistance protein (TelA) BCQ_0493 PF00690 Cation transporter/ATPase, N-terminus BCQ_0493 PF00689 Cation transporting ATPase, C-terminus BCQ_0494 PF06569 Protein of unknown function (DUF1128) BCQ_0495 PF01451 Low molecular weight phosphotyrosine protein phosphatase BCQ_0497 PF03631 Virulence factor BrkB BCQ_0499 PF00892 EamA-like transporter family BCQ_0502 PF10502 Signal peptidase, peptidase S26 BCQ_0504 PF09335 SNARE associated Golgi protein BCQ_0507 PF16242 Pyridoxamine 5'-phosphate oxidase like BCQ_0508 PF01699 Sodium/calcium exchanger protein BCQ_0509 PF14167 YfkD-like protein BCQ_0510 PF04055 Radical SAM superfamily BCQ_0510 PF08756 YfkB-like domain BCQ_0512 PF05681 Fumarate hydratase (Fumerase) BCQ_0512 PF05683 Fumarase C-terminus BCQ_0513 PF01522 Polysaccharide deacetylase BCQ_0514 PF00730 HhH-GPD superfamily base excision DNA repair protein BCQ_0515 PF01938 TRAM domain BCQ_0515 PF05958 tRNA (Uracil-5-)-methyltransferase BCQ_0516 PF01416 tRNA pseudouridine synthase BCQ_0520 PF00158 Sigma-54 interaction domain BCQ_0520 PF02954 Bacterial regulatory protein, Fis family BCQ_0520 PF13426 PAS domain BCQ_0522 PF00324 Amino acid permease BCQ_0523 PF01546 Peptidase family M20/M25/M40 BCQ_0523 PF07687 Peptidase dimerisation domain BCQ_0528 PF04960 Glutaminase BCQ_0529 PF00367 phosphotransferase system, EIIB BCQ_0529 PF02378 Phosphotransferase system, EIIC BCQ_0530 PF00144 Beta-lactamase BCQ_0533 PF00535 Glycosyl transferase family 2 BCQ_0534 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BCQ_0534 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BCQ_0534 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BCQ_0535 PF01370 NAD dependent epimerase/dehydratase family BCQ_0535 PF02911 Formyl transferase, C-terminal domain BCQ_0535 PF00551 Formyl transferase BCQ_0536 PF00535 Glycosyl transferase family 2 BCQ_0537 PF02901 Pyruvate formate lyase-like BCQ_0537 PF01228 Glycine radical BCQ_0538 PF04055 Radical SAM superfamily BCQ_0539 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase BCQ_0539 PF04101 Glycosyltransferase family 28 C-terminal domain BCQ_0542 PF01979 Amidohydrolase family BCQ_0543 PF01370 NAD dependent epimerase/dehydratase family BCQ_0543 PF08338 Domain of unknown function (DUF1731) BCQ_0544 PF02631 RecX family BCQ_0547 PF08176 Small acid-soluble spore protein K family BCQ_0548 PF14043 WVELL protein BCQ_0549 PF04307 LexA-binding, inner membrane-associated putative hydrolase BCQ_0550 PF00730 HhH-GPD superfamily base excision DNA repair protein BCQ_0550 PF14815 NUDIX domain BCQ_0552 PF04259 Small, acid-soluble spore protein, gamma-type BCQ_0554 PF14182 YgaB-like protein BCQ_0555 PF04167 Protein of unknown function (DUF402) BCQ_0556 PF00664 ABC transporter transmembrane region BCQ_0556 PF00005 ABC transporter BCQ_0557 PF06081 Aromatic acid exporter family member 1 BCQ_0558 PF00310 Glutamine amidotransferases class-II BCQ_0558 PF01493 GXGXG motif BCQ_0558 PF04898 Glutamate synthase central domain BCQ_0558 PF01645 Conserved region in glutamate synthase BCQ_0559 PF00202 Aminotransferase class-III BCQ_0560 PF00005 ABC transporter BCQ_0563 PF07885 Ion channel BCQ_0564 PF00578 AhpC/TSA family BCQ_0565 PF01475 Ferric uptake regulator family BCQ_0566 PF11023 Zinc-ribbon containing domain BCQ_0587 PF02899 Phage integrase, N-terminal SAM-like domain BCQ_0587 PF00589 Phage integrase family BCQ_0596 PF00239 Resolvase, N terminal domain BCQ_0596 PF02796 Helix-turn-helix domain of resolvase BCQ_0601 PF18801 response regulator aspartate phosphatase H, N terminal BCQ_0602 PF14436 Bacterial EndoU nuclease BCQ_0602 PF04740 LXG domain of WXG superfamily BCQ_0605 PF01709 Transcriptional regulator BCQ_0606 PF13344 Haloacid dehalogenase-like hydrolase BCQ_0606 PF00293 NUDIX domain BCQ_0607 PF00905 Penicillin binding protein transpeptidase domain BCQ_0607 PF00912 Transglycosylase BCQ_0608 PF13462 Thioredoxin BCQ_0611 PF08331 Domain of unknown function (DUF1730) BCQ_0612 PF12671 Putative amidase domain BCQ_0613 PF00588 SpoU rRNA Methylase family BCQ_0614 PF00990 Diguanylate cyclase, GGDEF domain BCQ_0614 PF03707 Bacterial signalling protein N terminal repeat BCQ_0614 PF00563 EAL domain BCQ_0616 PF06798 PrkA serine protein kinase C-terminal domain BCQ_0616 PF08298 PrkA AAA domain BCQ_0617 PF04285 Protein of unknown function (DUF444) BCQ_0619 PF02028 BCCT, betaine/carnitine/choline family transporter BCQ_0620 PF18496 Collagenase G catalytic helper subdomain BCQ_0620 PF01752 Collagenase BCQ_0620 PF08453 Peptidase family M9 N-terminal BCQ_0622 PF15975 Flotillin BCQ_0622 PF01145 SPFH domain / Band 7 family BCQ_0623 PF00672 HAMP domain BCQ_0623 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BCQ_0623 PF02743 Cache domain BCQ_0624 PF17203 Single cache domain 3 BCQ_0624 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCQ_0624 PF00989 PAS fold BCQ_0624 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain BCQ_0625 PF12431 Transcriptional regulator BCQ_0625 PF00072 Response regulator receiver domain BCQ_0626 PF03600 Citrate transporter BCQ_0631 PF04309 Glycerol-3-phosphate responsive antiterminator BCQ_0632 PF17912 MalK OB fold domain BCQ_0632 PF00005 ABC transporter BCQ_0633 PF00528 Binding-protein-dependent transport system inner membrane component BCQ_0634 PF00528 Binding-protein-dependent transport system inner membrane component BCQ_0635 PF13416 Bacterial extracellular solute-binding protein BCQ_0636 PF00149 Calcineurin-like phosphoesterase BCQ_0637 PF00072 Response regulator receiver domain BCQ_0637 PF00486 Transcriptional regulatory protein, C terminal BCQ_0638 PF00512 His Kinase A (phospho-acceptor) domain BCQ_0638 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCQ_0640 PF13529 Peptidase_C39 like family BCQ_0641 PF02743 Cache domain BCQ_0641 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BCQ_0641 PF00672 HAMP domain BCQ_0642 PF00989 PAS fold BCQ_0642 PF17203 Single cache domain 3 BCQ_0642 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain BCQ_0642 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCQ_0643 PF00072 Response regulator receiver domain BCQ_0644 PF03390 2-hydroxycarboxylate transporter family BCQ_0645 PF00390 Malic enzyme, N-terminal domain BCQ_0645 PF03949 Malic enzyme, NAD binding domain BCQ_0647 PF00892 EamA-like transporter family BCQ_0648 PF00155 Aminotransferase class I and II BCQ_0648 PF00392 Bacterial regulatory proteins, gntR family BCQ_0650 PF00672 HAMP domain BCQ_0650 PF18698 Histidine kinase sensor domain BCQ_0650 PF00512 His Kinase A (phospho-acceptor) domain BCQ_0650 PF00989 PAS fold BCQ_0650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCQ_0651 PF00072 Response regulator receiver domain BCQ_0651 PF00486 Transcriptional regulatory protein, C terminal BCQ_0653 PF00583 Acetyltransferase (GNAT) family BCQ_0653 PF13508 Acetyltransferase (GNAT) domain BCQ_0654 PF02634 FdhD/NarQ family BCQ_0655 PF00037 4Fe-4S binding domain BCQ_0655 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BCQ_0655 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BCQ_0655 PF01568 Molydopterin dinucleotide binding domain BCQ_0655 PF00384 Molybdopterin oxidoreductase BCQ_0656 PF07849 Protein of unknown function (DUF1641) BCQ_0658 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BCQ_0658 PF05222 Alanine dehydrogenase/PNT, N-terminal domain BCQ_0659 PF13520 Amino acid permease BCQ_0660 PF01022 Bacterial regulatory protein, arsR family BCQ_0661 PF00403 Heavy-metal-associated domain BCQ_0662 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family BCQ_0662 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain BCQ_0662 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain BCQ_0665 PF07504 Fungalysin/Thermolysin Propeptide Motif BCQ_0665 PF03413 Peptidase propeptide and YPEB domain BCQ_0665 PF01447 Thermolysin metallopeptidase, catalytic domain BCQ_0665 PF02868 Thermolysin metallopeptidase, alpha-helical domain BCQ_0669 PF04294 VanW like protein BCQ_0670 PF03816 Cell envelope-related transcriptional attenuator domain BCQ_0671 PF01773 Na+ dependent nucleoside transporter N-terminus BCQ_0671 PF07662 Na+ dependent nucleoside transporter C-terminus BCQ_0672 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BCQ_0673 PF00571 CBS domain BCQ_0673 PF03471 Transporter associated domain BCQ_0673 PF01595 Cyclin M transmembrane N-terminal domain BCQ_0674 PF00206 Lyase BCQ_0674 PF10415 Fumarase C C-terminus BCQ_0675 PF11337 Protein of unknown function (DUF3139) BCQ_0676 PF02652 L-lactate permease BCQ_0677 PF01022 Bacterial regulatory protein, arsR family BCQ_0678 PF08141 Small acid-soluble spore protein H family BCQ_0679 PF00854 POT family BCQ_0680 PF01497 Periplasmic binding protein BCQ_0681 PF01032 FecCD transport family BCQ_0682 PF01032 FecCD transport family BCQ_0683 PF00005 ABC transporter BCQ_0684 PF08241 Methyltransferase domain BCQ_0685 PF00155 Aminotransferase class I and II BCQ_0686 PF01370 NAD dependent epimerase/dehydratase family BCQ_0687 PF00156 Phosphoribosyl transferase domain BCQ_0688 PF00293 NUDIX domain BCQ_0688 PF13344 Haloacid dehalogenase-like hydrolase BCQ_0689 PF00092 von Willebrand factor type A domain BCQ_0690 PF07728 AAA domain (dynein-related subfamily) BCQ_0691 PF13091 PLD-like domain BCQ_0691 PF13396 Phospholipase_D-nuclease N-terminal BCQ_0694 PF00990 Diguanylate cyclase, GGDEF domain BCQ_0694 PF00563 EAL domain BCQ_0694 PF03707 Bacterial signalling protein N terminal repeat BCQ_0695 PF13520 Amino acid permease BCQ_0696 PF07702 UTRA domain BCQ_0696 PF00392 Bacterial regulatory proteins, gntR family BCQ_0697 PF00367 phosphotransferase system, EIIB BCQ_0697 PF02378 Phosphotransferase system, EIIC BCQ_0698 PF00367 phosphotransferase system, EIIB BCQ_0698 PF02378 Phosphotransferase system, EIIC BCQ_0699 PF02378 Phosphotransferase system, EIIC BCQ_0699 PF00367 phosphotransferase system, EIIB BCQ_0700 PF00128 Alpha amylase, catalytic domain BCQ_0700 PF16657 Maltogenic Amylase, C-terminal domain BCQ_0703 PF03323 Bacillus/Clostridium GerA spore germination protein BCQ_0705 PF01636 Phosphotransferase enzyme family BCQ_0706 PF01235 Sodium:alanine symporter family BCQ_0707 PF00005 ABC transporter BCQ_0708 PF00497 Bacterial extracellular solute-binding proteins, family 3 BCQ_0709 PF00528 Binding-protein-dependent transport system inner membrane component BCQ_0710 PF00528 Binding-protein-dependent transport system inner membrane component BCQ_0711 PF00324 Amino acid permease BCQ_0716 PF08279 HTH domain BCQ_0716 PF13280 WYL domain BCQ_0717 PF01872 RibD C-terminal domain BCQ_0718 PF18698 Histidine kinase sensor domain BCQ_0718 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCQ_0718 PF00512 His Kinase A (phospho-acceptor) domain BCQ_0718 PF00672 HAMP domain BCQ_0718 PF00989 PAS fold BCQ_0719 PF00486 Transcriptional regulatory protein, C terminal BCQ_0719 PF00072 Response regulator receiver domain BCQ_0721 PF01740 STAS domain BCQ_0721 PF00916 Sulfate permease family BCQ_0722 PF00582 Universal stress protein family BCQ_0724 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BCQ_0725 PF00528 Binding-protein-dependent transport system inner membrane component BCQ_0726 PF00528 Binding-protein-dependent transport system inner membrane component BCQ_0727 PF00005 ABC transporter BCQ_0727 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BCQ_0728 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BCQ_0728 PF00005 ABC transporter BCQ_0729 PF07690 Major Facilitator Superfamily BCQ_0730 PF01047 MarR family BCQ_0731 PF07690 Major Facilitator Superfamily BCQ_0732 PF00356 Bacterial regulatory proteins, lacI family BCQ_0733 PF00294 pfkB family carbohydrate kinase BCQ_0734 PF05025 RbsD / FucU transport protein family BCQ_0735 PF00005 ABC transporter BCQ_0736 PF02653 Branched-chain amino acid transport system / permease component BCQ_0737 PF13407 Periplasmic binding protein domain BCQ_0738 PF00923 Transaldolase/Fructose-6-phosphate aldolase BCQ_0739 PF05547 Immune inhibitor A peptidase M6 BCQ_0741 PF08240 Alcohol dehydrogenase GroES-like domain BCQ_0741 PF00107 Zinc-binding dehydrogenase BCQ_0743 PF00882 Zinc dependent phospholipase C BCQ_0744 PF12323 Helix-turn-helix domain BCQ_0744 PF01385 Probable transposase BCQ_0744 PF07282 Putative transposase DNA-binding domain BCQ_0745 PF03372 Endonuclease/Exonuclease/phosphatase family BCQ_0750 PF02673 Bacitracin resistance protein BacA BCQ_0751 PF00672 HAMP domain BCQ_0751 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BCQ_0751 PF02743 Cache domain BCQ_0752 PF06725 3D domain BCQ_0752 PF07501 G5 domain BCQ_0752 PF03990 G5-linked-Ubiquitin-like domain BCQ_0753 PF01381 Helix-turn-helix BCQ_0755 PF04203 Sortase domain BCQ_0757 PF00854 POT family BCQ_0759 PF05525 Branched-chain amino acid transport protein BCQ_0762 PF00324 Amino acid permease BCQ_0763 PF00860 Permease family BCQ_0767 PF13673 Acetyltransferase (GNAT) domain BCQ_0768 PF00999 Sodium/hydrogen exchanger family BCQ_0768 PF02254 TrkA-N domain BCQ_0768 PF02080 TrkA-C domain BCQ_0770 PF00510 Cytochrome c oxidase subunit III BCQ_0771 PF00115 Cytochrome C and Quinol oxidase polypeptide I BCQ_0772 PF02790 Cytochrome C oxidase subunit II, transmembrane domain BCQ_0773 PF00324 Amino acid permease BCQ_0774 PF13529 Peptidase_C39 like family BCQ_0775 PF07687 Peptidase dimerisation domain BCQ_0775 PF01546 Peptidase family M20/M25/M40 BCQ_0776 PF11755 Protein of unknown function (DUF3311) BCQ_0777 PF00474 Sodium:solute symporter family BCQ_0778 PF03323 Bacillus/Clostridium GerA spore germination protein BCQ_0779 PF03845 Spore germination protein BCQ_0780 PF05504 Spore germination B3/ GerAC like, C-terminal BCQ_0782 PF07664 Ferrous iron transport protein B C terminus BCQ_0782 PF07670 Nucleoside recognition BCQ_0782 PF17910 FeoB cytosolic helical domain BCQ_0782 PF02421 Ferrous iron transport protein B BCQ_0783 PF17910 FeoB cytosolic helical domain BCQ_0783 PF07670 Nucleoside recognition BCQ_0783 PF07664 Ferrous iron transport protein B C terminus BCQ_0783 PF02421 Ferrous iron transport protein B BCQ_0784 PF07670 Nucleoside recognition BCQ_0784 PF04023 FeoA domain BCQ_0784 PF02421 Ferrous iron transport protein B BCQ_0784 PF17910 FeoB cytosolic helical domain BCQ_0784 PF07664 Ferrous iron transport protein B C terminus BCQ_0785 PF12849 PBP superfamily domain BCQ_0786 PF00528 Binding-protein-dependent transport system inner membrane component BCQ_0787 PF00528 Binding-protein-dependent transport system inner membrane component BCQ_0788 PF00873 AcrB/AcrD/AcrF family BCQ_0813 PF00571 CBS domain BCQ_0815 PF00246 Zinc carboxypeptidase BCQ_0815 PF08239 Bacterial SH3 domain BCQ_0816 PF03070 TENA/THI-4/PQQC family BCQ_0817 PF00005 ABC transporter BCQ_0818 PF00528 Binding-protein-dependent transport system inner membrane component BCQ_0819 PF09084 NMT1/THI5 like BCQ_0820 PF02581 Thiamine monophosphate synthase BCQ_0821 PF01266 FAD dependent oxidoreductase BCQ_0822 PF02597 ThiS family BCQ_0823 PF05690 Thiazole biosynthesis protein ThiG BCQ_0824 PF00899 ThiF family BCQ_0825 PF08543 Phosphomethylpyrimidine kinase BCQ_0829 PF03814 Potassium-transporting ATPase A subunit BCQ_0831 PF02669 K+-transporting ATPase, c chain BCQ_0832 PF02702 Osmosensitive K+ channel His kinase sensor domain BCQ_0833 PF07690 Major Facilitator Superfamily BCQ_0834 PF01047 MarR family BCQ_0839 PF00005 ABC transporter BCQ_0841 PF02653 Branched-chain amino acid transport system / permease component BCQ_0842 PF00005 ABC transporter BCQ_0844 PF00860 Permease family BCQ_0846 PF03734 L,D-transpeptidase catalytic domain BCQ_0846 PF17969 L,D-transpeptidase C-terminal domain BCQ_0849 PF00085 Thioredoxin BCQ_0850 PF02600 Disulfide bond formation protein DsbB BCQ_0851 PF14148 YhdB-like protein BCQ_0853 PF03845 Spore germination protein BCQ_0855 PF03323 Bacillus/Clostridium GerA spore germination protein BCQ_0857 PF00881 Nitroreductase family BCQ_0858 PF04293 SpoVR like protein BCQ_0861 PF07992 Pyridine nucleotide-disulphide oxidoreductase BCQ_0861 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BCQ_0862 PF02583 Metal-sensitive transcriptional repressor BCQ_0863 PF01206 Sulfurtransferase TusA BCQ_0863 PF00581 Rhodanese-like domain BCQ_0864 PF00581 Rhodanese-like domain BCQ_0864 PF00753 Metallo-beta-lactamase superfamily BCQ_0865 PF01206 Sulfurtransferase TusA BCQ_0866 PF01206 Sulfurtransferase TusA BCQ_0867 PF00581 Rhodanese-like domain BCQ_0867 PF01206 Sulfurtransferase TusA BCQ_0869 PF13686 DsrE/DsrF/DrsH-like family BCQ_0870 PF01925 Sulfite exporter TauE/SafE BCQ_0872 PF03816 Cell envelope-related transcriptional attenuator domain BCQ_0873 PF08240 Alcohol dehydrogenase GroES-like domain BCQ_0873 PF00107 Zinc-binding dehydrogenase BCQ_0874 PF02690 Na+/Pi-cotransporter BCQ_0875 PF07690 Major Facilitator Superfamily BCQ_0877 PF00874 PRD domain BCQ_0877 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BCQ_0877 PF05043 Mga helix-turn-helix domain BCQ_0877 PF08279 HTH domain BCQ_0878 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit BCQ_0879 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BCQ_0880 PF02378 Phosphotransferase system, EIIC BCQ_0884 PF06725 3D domain BCQ_0884 PF01476 LysM domain BCQ_0885 PF02687 FtsX-like permease family BCQ_0885 PF12704 MacB-like periplasmic core domain BCQ_0886 PF00005 ABC transporter BCQ_0888 PF09529 Integral membrane protein (intg_mem_TP0381) BCQ_0891 PF05525 Branched-chain amino acid transport protein BCQ_0892 PF05067 Manganese containing catalase BCQ_0893 PF12652 CotJB protein BCQ_0894 PF11007 Spore coat associated protein JA (CotJA) BCQ_0897 PF02735 Ku70/Ku80 beta-barrel domain BCQ_0899 PF09335 SNARE associated Golgi protein BCQ_0905 PF13520 Amino acid permease BCQ_0906 PF00999 Sodium/hydrogen exchanger family BCQ_0908 PF01418 Helix-turn-helix domain, rpiR family BCQ_0908 PF01380 SIS domain BCQ_0909 PF13580 SIS domain BCQ_0910 PF02378 Phosphotransferase system, EIIC BCQ_0910 PF00367 phosphotransferase system, EIIB BCQ_0912 PF07681 DoxX BCQ_0915 PF00892 EamA-like transporter family BCQ_0916 PF01037 Lrp/AsnC ligand binding domain BCQ_0918 PF00893 Small Multidrug Resistance protein BCQ_0919 PF00893 Small Multidrug Resistance protein BCQ_0920 PF17934 Tetracyclin repressor-like, C-terminal domain BCQ_0920 PF00440 Bacterial regulatory proteins, tetR family BCQ_0921 PF07690 Major Facilitator Superfamily BCQ_0922 PF01638 HxlR-like helix-turn-helix BCQ_0924 PF02525 Flavodoxin-like fold BCQ_0925 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BCQ_0925 PF12793 Sugar transport-related sRNA regulator N-term BCQ_0926 PF07690 Major Facilitator Superfamily BCQ_0928 PF01965 DJ-1/PfpI family BCQ_0931 PF13520 Amino acid permease BCQ_0932 PF01177 Asp/Glu/Hydantoin racemase BCQ_0934 PF00171 Aldehyde dehydrogenase family BCQ_0935 PF00664 ABC transporter transmembrane region BCQ_0935 PF00005 ABC transporter BCQ_0936 PF00664 ABC transporter transmembrane region BCQ_0936 PF00005 ABC transporter BCQ_0937 PF00497 Bacterial extracellular solute-binding proteins, family 3 BCQ_0938 PF00528 Binding-protein-dependent transport system inner membrane component BCQ_0939 PF00005 ABC transporter BCQ_0940 PF00269 Small, acid-soluble spore proteins, alpha/beta type BCQ_0942 PF14398 YheC/D like ATP-grasp BCQ_0944 PF04286 Protein of unknown function (DUF445) BCQ_0945 PF06133 Control of competence regulator ComK, YlbF/YmcA BCQ_0947 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCQ_0947 PF07730 Histidine kinase BCQ_0948 PF00072 Response regulator receiver domain BCQ_0948 PF00196 Bacterial regulatory proteins, luxR family BCQ_0956 PF00205 Thiamine pyrophosphate enzyme, central domain BCQ_0956 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BCQ_0956 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BCQ_0957 PF03306 Alpha-acetolactate decarboxylase BCQ_0959 PF02245 Methylpurine-DNA glycosylase (MPG) BCQ_0961 PF01510 N-acetylmuramoyl-L-alanine amidase BCQ_0961 PF01471 Putative peptidoglycan binding domain BCQ_0962 PF04055 Radical SAM superfamily BCQ_0964 PF13333 Integrase core domain BCQ_0964 PF00665 Integrase core domain BCQ_0964 PF13276 HTH-like domain BCQ_0965 PF00501 AMP-binding enzyme BCQ_0965 PF13193 AMP-binding enzyme C-terminal domain BCQ_0967 PF01740 STAS domain BCQ_0967 PF00916 Sulfate permease family BCQ_0970 PF01043 SecA preprotein cross-linking domain BCQ_0970 PF07517 SecA DEAD-like domain BCQ_0970 PF07516 SecA Wing and Scaffold domain BCQ_0971 PF01943 Polysaccharide biosynthesis protein BCQ_0971 PF14667 Polysaccharide biosynthesis C-terminal domain BCQ_0973 PF13205 Bacterial Ig-like domain BCQ_0973 PF00395 S-layer homology domain BCQ_0973 PF02368 Bacterial Ig-like domain (group 2) BCQ_0974 PF00395 S-layer homology domain BCQ_0976 PF03062 MBOAT, membrane-bound O-acyltransferase family BCQ_0977 PF03062 MBOAT, membrane-bound O-acyltransferase family BCQ_0981 PF00378 Enoyl-CoA hydratase/isomerase BCQ_0984 PF05343 M42 glutamyl aminopeptidase BCQ_0985 PF01520 N-acetylmuramoyl-L-alanine amidase BCQ_0985 PF00395 S-layer homology domain BCQ_0987 PF11121 Protein of unknown function (DUF2639) BCQ_0988 PF05544 Proline racemase BCQ_0989 PF02423 Ornithine cyclodeaminase/mu-crystallin family BCQ_0993 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BCQ_0994 PF00528 Binding-protein-dependent transport system inner membrane component BCQ_0995 PF00528 Binding-protein-dependent transport system inner membrane component BCQ_0995 PF12911 N-terminal TM domain of oligopeptide transport permease C BCQ_0996 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BCQ_0996 PF00005 ABC transporter BCQ_0997 PF00005 ABC transporter BCQ_0997 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BCQ_0998 PF00083 Sugar (and other) transporter BCQ_0999 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain BCQ_0999 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCQ_1000 PF12431 Transcriptional regulator BCQ_1000 PF08279 HTH domain BCQ_1000 PF00072 Response regulator receiver domain BCQ_1001 PF03401 Tripartite tricarboxylate transporter family receptor BCQ_1005 PF02342 TerD domain BCQ_1008 PF02086 D12 class N6 adenine-specific DNA methyltransferase BCQ_1014 PF13411 MerR HTH family regulatory protein BCQ_1014 PF06445 GyrI-like small molecule binding domain BCQ_1021 PF00772 DnaB-like helicase N terminal domain BCQ_1021 PF03796 DnaB-like helicase C terminal domain BCQ_1024 PF00772 DnaB-like helicase N terminal domain BCQ_1024 PF03796 DnaB-like helicase C terminal domain BCQ_1026 PF01925 Sulfite exporter TauE/SafE BCQ_1039 PF01066 CDP-alcohol phosphatidyltransferase BCQ_1042 PF02733 Dak1 domain BCQ_1044 PF02733 Dak1 domain BCQ_1050 PF00672 HAMP domain BCQ_1050 PF01966 HD domain BCQ_1053 PF00395 S-layer homology domain BCQ_1058 PF03424 Carbohydrate binding domain (family 17/28) BCQ_1058 PF00395 S-layer homology domain BCQ_1058 PF00150 Cellulase (glycosyl hydrolase family 5) BCQ_1062 PF11181 Heat induced stress protein YflT BCQ_1063 PF05532 CsbD-like BCQ_1066 PF01740 STAS domain BCQ_1067 PF13581 Histidine kinase-like ATPase domain BCQ_1068 PF04545 Sigma-70, region 4 BCQ_1068 PF04539 Sigma-70 region 3 BCQ_1068 PF04542 Sigma-70 region 2 BCQ_1070 PF13426 PAS domain BCQ_1070 PF07228 Stage II sporulation protein E (SpoIIE) BCQ_1071 PF01739 CheR methyltransferase, SAM binding domain BCQ_1071 PF03705 CheR methyltransferase, all-alpha domain BCQ_1072 PF00512 His Kinase A (phospho-acceptor) domain BCQ_1072 PF01627 Hpt domain BCQ_1072 PF00072 Response regulator receiver domain BCQ_1072 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCQ_1077 PF01906 Putative heavy-metal-binding BCQ_1080 PF08240 Alcohol dehydrogenase GroES-like domain BCQ_1080 PF00107 Zinc-binding dehydrogenase BCQ_1087 PF00149 Calcineurin-like phosphoesterase BCQ_1088 PF13514 AAA domain BCQ_1089 PF01336 OB-fold nucleic acid binding domain BCQ_1089 PF01966 HD domain BCQ_1090 PF00440 Bacterial regulatory proteins, tetR family BCQ_1091 PF07690 Major Facilitator Superfamily BCQ_1092 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BCQ_1093 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BCQ_1095 PF00561 alpha/beta hydrolase fold BCQ_1095 PF08386 TAP-like protein BCQ_1102 PF04309 Glycerol-3-phosphate responsive antiterminator BCQ_1103 PF00230 Major intrinsic protein BCQ_1104 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BCQ_1104 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BCQ_1105 PF16901 C-terminal domain of alpha-glycerophosphate oxidase BCQ_1105 PF01266 FAD dependent oxidoreductase BCQ_1107 PF08281 Sigma-70, region 4 BCQ_1107 PF04542 Sigma-70 region 2 BCQ_1109 PF01098 Cell cycle protein BCQ_1115 PF13538 UvrD-like helicase C-terminal domain BCQ_1118 PF01047 MarR family BCQ_1119 PF12732 YtxH-like protein BCQ_1120 PF01230 HIT domain BCQ_1121 PF00005 ABC transporter BCQ_1122 PF05975 Bacterial ABC transporter protein EcsB BCQ_1123 PF12787 EcsC protein family BCQ_1125 PF17934 Tetracyclin repressor-like, C-terminal domain BCQ_1125 PF00440 Bacterial regulatory proteins, tetR family BCQ_1127 PF03703 Bacterial PH domain BCQ_1128 PF03703 Bacterial PH domain BCQ_1134 PF03703 Bacterial PH domain BCQ_1135 PF03703 Bacterial PH domain BCQ_1136 PF03992 Antibiotic biosynthesis monooxygenase BCQ_1137 PF00912 Transglycosylase BCQ_1137 PF00905 Penicillin binding protein transpeptidase domain BCQ_1138 PF01208 Uroporphyrinogen decarboxylase (URO-D) BCQ_1145 PF00440 Bacterial regulatory proteins, tetR family BCQ_1145 PF17932 Tetracyclin repressor-like, C-terminal domain BCQ_1151 PF13280 WYL domain BCQ_1151 PF08279 HTH domain BCQ_1152 PF00356 Bacterial regulatory proteins, lacI family BCQ_1153 PF12706 Beta-lactamase superfamily domain BCQ_1154 PF03099 Biotin/lipoate A/B protein ligase family BCQ_1154 PF10437 Bacterial lipoate protein ligase C-terminus BCQ_1156 PF00501 AMP-binding enzyme BCQ_1156 PF13193 AMP-binding enzyme C-terminal domain BCQ_1158 PF00395 S-layer homology domain BCQ_1158 PF01520 N-acetylmuramoyl-L-alanine amidase BCQ_1159 PF05593 RHS Repeat BCQ_1161 PF05593 RHS Repeat BCQ_1171 PF00440 Bacterial regulatory proteins, tetR family BCQ_1172 PF12146 Serine aminopeptidase, S33 BCQ_1173 PF00149 Calcineurin-like phosphoesterase BCQ_1175 PF01966 HD domain BCQ_1177 PF04542 Sigma-70 region 2 BCQ_1177 PF08281 Sigma-70, region 4 BCQ_1178 PF06445 GyrI-like small molecule binding domain BCQ_1178 PF12833 Helix-turn-helix domain BCQ_1180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCQ_1180 PF00512 His Kinase A (phospho-acceptor) domain BCQ_1181 PF00486 Transcriptional regulatory protein, C terminal BCQ_1181 PF00072 Response regulator receiver domain BCQ_1186 PF01435 Peptidase family M48 BCQ_1186 PF16491 CAAX prenyl protease N-terminal, five membrane helices BCQ_1187 PF00892 EamA-like transporter family BCQ_1190 PF00395 S-layer homology domain BCQ_1191 PF01274 Malate synthase BCQ_1192 PF00463 Isocitrate lyase family BCQ_1194 PF00313 'Cold-shock' DNA-binding domain BCQ_1196 PF06338 ComK protein BCQ_1198 PF09335 SNARE associated Golgi protein BCQ_1199 PF10502 Signal peptidase, peptidase S26 BCQ_1200 PF13361 UvrD-like helicase C-terminal domain BCQ_1200 PF12705 PD-(D/E)XK nuclease superfamily BCQ_1201 PF13361 UvrD-like helicase C-terminal domain BCQ_1201 PF00580 UvrD/REP helicase N-terminal domain BCQ_1201 PF12705 PD-(D/E)XK nuclease superfamily BCQ_1203 PF10676 Spore germination protein gerPA/gerPF BCQ_1204 PF10970 Spore germination protein GerPE BCQ_1206 PF10737 Spore germination protein GerPC BCQ_1207 PF10803 Spore germination GerPB BCQ_1208 PF10676 Spore germination protein gerPA/gerPF BCQ_1209 PF09388 Spo0E like sporulation regulatory protein BCQ_1210 PF01557 Fumarylacetoacetate (FAA) hydrolase family BCQ_1211 PF00202 Aminotransferase class-III BCQ_1212 PF07457 Protein of unknown function (DUF1516) BCQ_1214 PF00733 Asparagine synthase BCQ_1214 PF13537 Glutamine amidotransferase domain BCQ_1216 PF00199 Catalase BCQ_1216 PF06628 Catalase-related immune-responsive BCQ_1217 PF00909 Ammonium Transporter Family BCQ_1218 PF00128 Alpha amylase, catalytic domain BCQ_1220 PF04461 Protein of unknown function (DUF520) BCQ_1221 PF17783 CvfB-like winged helix domain BCQ_1221 PF13509 S1 domain BCQ_1222 PF05593 RHS Repeat BCQ_1224 PF05593 RHS Repeat BCQ_1225 PF05593 RHS Repeat BCQ_1227 PF05593 RHS Repeat BCQ_1228 PF00639 PPIC-type PPIASE domain BCQ_1230 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BCQ_1230 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BCQ_1231 PF12758 Protein of unknown function (DUF3813) BCQ_1235 PF07724 AAA domain (Cdc48 subfamily) BCQ_1235 PF17871 AAA lid domain BCQ_1235 PF10431 C-terminal, D2-small domain, of ClpB protein BCQ_1235 PF00004 ATPase family associated with various cellular activities (AAA) BCQ_1235 PF02861 Clp amino terminal domain, pathogenicity island component BCQ_1239 PF10815 ComZ BCQ_1240 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BCQ_1240 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BCQ_1241 PF00109 Beta-ketoacyl synthase, N-terminal domain BCQ_1241 PF02801 Beta-ketoacyl synthase, C-terminal domain BCQ_1242 PF10026 Predicted Zn-dependent protease (DUF2268) BCQ_1243 PF12227 Protein of unknown function (DUF3603) BCQ_1244 PF00579 tRNA synthetases class I (W and Y) BCQ_1246 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BCQ_1247 PF00528 Binding-protein-dependent transport system inner membrane component BCQ_1248 PF12911 N-terminal TM domain of oligopeptide transport permease C BCQ_1248 PF00528 Binding-protein-dependent transport system inner membrane component BCQ_1249 PF00005 ABC transporter BCQ_1249 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BCQ_1250 PF00005 ABC transporter BCQ_1250 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BCQ_1251 PF01554 MatE BCQ_1252 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BCQ_1255 PF03960 ArsC family BCQ_1256 PF03741 Integral membrane protein TerC family BCQ_1257 PF05389 Negative regulator of genetic competence (MecA) BCQ_1258 PF13396 Phospholipase_D-nuclease N-terminal BCQ_1258 PF13091 PLD-like domain BCQ_1260 PF08439 Oligopeptidase F BCQ_1260 PF01432 Peptidase family M3 BCQ_1262 PF01152 Bacterial-like globin BCQ_1263 PF01928 CYTH domain BCQ_1265 PF04607 Region found in RelA / SpoT proteins BCQ_1266 PF01513 ATP-NAD kinase BCQ_1267 PF00849 RNA pseudouridylate synthase BCQ_1269 PF00149 Calcineurin-like phosphoesterase BCQ_1270 PF01098 Cell cycle protein BCQ_1271 PF00535 Glycosyl transferase family 2 BCQ_1272 PF08241 Methyltransferase domain BCQ_1273 PF05711 Macrocin-O-methyltransferase (TylF) BCQ_1276 PF13181 Tetratricopeptide repeat BCQ_1276 PF00535 Glycosyl transferase family 2 BCQ_1280 PF00483 Nucleotidyl transferase BCQ_1281 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase BCQ_1282 PF16363 GDP-mannose 4,6 dehydratase BCQ_1283 PF04321 RmlD substrate binding domain BCQ_1287 PF07098 Protein of unknown function (DUF1360) BCQ_1291 PF00580 UvrD/REP helicase N-terminal domain BCQ_1291 PF13361 UvrD-like helicase C-terminal domain BCQ_1292 PF13673 Acetyltransferase (GNAT) domain BCQ_1294 PF00756 Putative esterase BCQ_1297 PF02368 Bacterial Ig-like domain (group 2) BCQ_1298 PF00474 Sodium:solute symporter family BCQ_1300 PF02885 Glycosyl transferase family, helical bundle domain BCQ_1300 PF00591 Glycosyl transferase family, a/b domain BCQ_1300 PF00117 Glutamine amidotransferase class-I BCQ_1301 PF02885 Glycosyl transferase family, helical bundle domain BCQ_1301 PF00591 Glycosyl transferase family, a/b domain BCQ_1302 PF00218 Indole-3-glycerol phosphate synthase BCQ_1303 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase BCQ_1304 PF00291 Pyridoxal-phosphate dependent enzyme BCQ_1305 PF00290 Tryptophan synthase alpha chain BCQ_1307 PF02652 L-lactate permease BCQ_1308 PF10042 Uncharacterized conserved protein (DUF2278) BCQ_1309 PF00085 Thioredoxin BCQ_1316 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BCQ_1316 PF07992 Pyridine nucleotide-disulphide oxidoreductase BCQ_1323 PF02817 e3 binding domain BCQ_1323 PF00364 Biotin-requiring enzyme BCQ_1323 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BCQ_1324 PF00676 Dehydrogenase E1 component BCQ_1324 PF02779 Transketolase, pyrimidine binding domain BCQ_1324 PF16870 2-oxoglutarate dehydrogenase C-terminal BCQ_1325 PF01381 Helix-turn-helix BCQ_1345 PF14659 Phage integrase, N-terminal SAM-like domain BCQ_1345 PF00589 Phage integrase family BCQ_1348 PF13649 Methyltransferase domain BCQ_1350 PF00768 D-alanyl-D-alanine carboxypeptidase BCQ_1350 PF07943 Penicillin-binding protein 5, C-terminal domain BCQ_1352 PF12389 Camelysin metallo-endopeptidase BCQ_1354 PF12389 Camelysin metallo-endopeptidase BCQ_1355 PF08671 Anti-repressor SinI BCQ_1355 PF01381 Helix-turn-helix BCQ_1357 PF05547 Immune inhibitor A peptidase M6 BCQ_1358 PF00171 Aldehyde dehydrogenase family BCQ_1359 PF00005 ABC transporter BCQ_1359 PF08402 TOBE domain BCQ_1360 PF00528 Binding-protein-dependent transport system inner membrane component BCQ_1361 PF00528 Binding-protein-dependent transport system inner membrane component BCQ_1362 PF13416 Bacterial extracellular solute-binding protein BCQ_1364 PF03176 MMPL family BCQ_1366 PF01479 S4 domain BCQ_1366 PF00849 RNA pseudouridylate synthase BCQ_1368 PF00188 Cysteine-rich secretory protein family BCQ_1369 PF02754 Cysteine-rich domain BCQ_1369 PF13183 4Fe-4S dicluster domain BCQ_1370 PF02913 FAD linked oxidases, C-terminal domain BCQ_1370 PF01565 FAD binding domain BCQ_1371 PF17853 GGDEF-like domain BCQ_1371 PF13556 PucR C-terminal helix-turn-helix domain BCQ_1371 PF05651 Putative sugar diacid recognition BCQ_1373 PF00486 Transcriptional regulatory protein, C terminal BCQ_1373 PF00072 Response regulator receiver domain BCQ_1374 PF00672 HAMP domain BCQ_1374 PF00989 PAS fold BCQ_1374 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCQ_1374 PF18698 Histidine kinase sensor domain BCQ_1374 PF00512 His Kinase A (phospho-acceptor) domain BCQ_1375 PF07729 FCD domain BCQ_1375 PF00392 Bacterial regulatory proteins, gntR family BCQ_1376 PF02754 Cysteine-rich domain BCQ_1377 PF02589 LUD domain BCQ_1377 PF13183 4Fe-4S dicluster domain BCQ_1377 PF11870 Domain of unknown function (DUF3390) BCQ_1378 PF02589 LUD domain BCQ_1379 PF01478 Type IV leader peptidase family BCQ_1379 PF06750 Bacterial Peptidase A24 N-terminal domain BCQ_1381 PF01226 Formate/nitrite transporter BCQ_1382 PF03741 Integral membrane protein TerC family BCQ_1383 PF02386 Cation transport protein BCQ_1384 PF00269 Small, acid-soluble spore proteins, alpha/beta type BCQ_1385 PF01575 MaoC like domain BCQ_1390 PF00561 alpha/beta hydrolase fold BCQ_1392 PF02386 Cation transport protein BCQ_1396 PF08402 TOBE domain BCQ_1396 PF00005 ABC transporter BCQ_1397 PF00528 Binding-protein-dependent transport system inner membrane component BCQ_1398 PF13419 Haloacid dehalogenase-like hydrolase BCQ_1399 PF00266 Aminotransferase class-V BCQ_1401 PF00455 DeoR C terminal sensor domain BCQ_1401 PF08220 DeoR-like helix-turn-helix domain BCQ_1402 PF00395 S-layer homology domain BCQ_1402 PF01520 N-acetylmuramoyl-L-alanine amidase BCQ_1403 PF00596 Class II Aldolase and Adducin N-terminal domain BCQ_1405 PF04748 Divergent polysaccharide deacetylase BCQ_1406 PF09388 Spo0E like sporulation regulatory protein BCQ_1407 PF02743 Cache domain BCQ_1407 PF00512 His Kinase A (phospho-acceptor) domain BCQ_1407 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCQ_1408 PF01047 MarR family BCQ_1410 PF12867 DinB superfamily BCQ_1412 PF00512 His Kinase A (phospho-acceptor) domain BCQ_1412 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCQ_1412 PF00989 PAS fold BCQ_1412 PF13188 PAS domain BCQ_1412 PF13426 PAS domain BCQ_1413 PF06508 Queuosine biosynthesis protein QueC BCQ_1414 PF01242 6-pyruvoyl tetrahydropterin synthase BCQ_1415 PF04055 Radical SAM superfamily BCQ_1416 PF14489 QueF-like protein BCQ_1417 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) BCQ_1423 PF07972 NrdI Flavodoxin like BCQ_1424 PF02867 Ribonucleotide reductase, barrel domain BCQ_1424 PF08343 Ribonucleotide reductase N-terminal BCQ_1424 PF00317 Ribonucleotide reductase, all-alpha domain BCQ_1425 PF00317 Ribonucleotide reductase, all-alpha domain BCQ_1425 PF08343 Ribonucleotide reductase N-terminal BCQ_1425 PF02867 Ribonucleotide reductase, barrel domain BCQ_1426 PF00268 Ribonucleotide reductase, small chain BCQ_1427 PF13392 HNH endonuclease BCQ_1428 PF00268 Ribonucleotide reductase, small chain BCQ_1429 PF00392 Bacterial regulatory proteins, gntR family BCQ_1430 PF00005 ABC transporter BCQ_1432 PF00005 ABC transporter BCQ_1433 PF12679 ABC-2 family transporter protein BCQ_1434 PF02517 CPBP intramembrane metalloprotease BCQ_1436 PF01037 Lrp/AsnC ligand binding domain BCQ_1438 PF00857 Isochorismatase family BCQ_1440 PF02016 LD-carboxypeptidase N-terminal domain BCQ_1440 PF17676 LD-carboxypeptidase C-terminal domain BCQ_1441 PF03060 Nitronate monooxygenase BCQ_1442 PF04914 DltD protein BCQ_1443 PF00550 Phosphopantetheine attachment site BCQ_1444 PF03062 MBOAT, membrane-bound O-acyltransferase family BCQ_1445 PF13193 AMP-binding enzyme C-terminal domain BCQ_1445 PF00501 AMP-binding enzyme BCQ_1448 PF01546 Peptidase family M20/M25/M40 BCQ_1448 PF07687 Peptidase dimerisation domain BCQ_1450 PF00258 Flavodoxin BCQ_1453 PF01636 Phosphotransferase enzyme family BCQ_1457 PF01554 MatE BCQ_1458 PF02673 Bacitracin resistance protein BacA BCQ_1460 PF01047 MarR family BCQ_1462 PF00375 Sodium:dicarboxylate symporter family BCQ_1463 PF02386 Cation transport protein BCQ_1465 PF09579 Sporulation protein YtfJ (Spore_YtfJ) BCQ_1467 PF03698 Uncharacterised protein family (UPF0180) BCQ_1469 PF01063 Amino-transferase class IV BCQ_1470 PF00205 Thiamine pyrophosphate enzyme, central domain BCQ_1470 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BCQ_1470 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BCQ_1471 PF10369 Small subunit of acetolactate synthase BCQ_1471 PF01842 ACT domain BCQ_1472 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain BCQ_1472 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain BCQ_1473 PF08502 LeuA allosteric (dimerisation) domain BCQ_1473 PF00682 HMGL-like BCQ_1474 PF00180 Isocitrate/isopropylmalate dehydrogenase BCQ_1475 PF00330 Aconitase family (aconitate hydratase) BCQ_1476 PF00694 Aconitase C-terminal domain BCQ_1477 PF13393 Histidyl-tRNA synthetase BCQ_1478 PF01634 ATP phosphoribosyltransferase BCQ_1479 PF00815 Histidinol dehydrogenase BCQ_1480 PF00475 Imidazoleglycerol-phosphate dehydratase BCQ_1481 PF00117 Glutamine amidotransferase class-I BCQ_1482 PF00977 Histidine biosynthesis protein BCQ_1483 PF00977 Histidine biosynthesis protein BCQ_1484 PF01502 Phosphoribosyl-AMP cyclohydrolase BCQ_1485 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase BCQ_1486 PF02811 PHP domain BCQ_1488 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BCQ_1488 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BCQ_1489 PF01066 CDP-alcohol phosphatidyltransferase BCQ_1490 PF00884 Sulfatase BCQ_1492 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain BCQ_1492 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BCQ_1494 PF01507 Phosphoadenosine phosphosulfate reductase family BCQ_1495 PF14306 PUA-like domain BCQ_1495 PF01747 ATP-sulfurylase BCQ_1497 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BCQ_1497 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BCQ_1499 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BCQ_1500 PF01903 CbiX BCQ_1502 PF00209 Sodium:neurotransmitter symporter family BCQ_1505 PF00375 Sodium:dicarboxylate symporter family BCQ_1507 PF03553 Na+/H+ antiporter family BCQ_1510 PF09922 Cell wall-active antibiotics response 4TMS YvqF BCQ_1511 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCQ_1511 PF07730 Histidine kinase BCQ_1511 PF00672 HAMP domain BCQ_1512 PF00072 Response regulator receiver domain BCQ_1512 PF00196 Bacterial regulatory proteins, luxR family BCQ_1514 PF05525 Branched-chain amino acid transport protein BCQ_1515 PF08241 Methyltransferase domain BCQ_1520 PF00970 Oxidoreductase FAD-binding domain BCQ_1520 PF00175 Oxidoreductase NAD-binding domain BCQ_1520 PF00042 Globin BCQ_1523 PF01925 Sulfite exporter TauE/SafE BCQ_1524 PF01384 Phosphate transporter family BCQ_1525 PF01865 Protein of unknown function DUF47 BCQ_1526 PF00912 Transglycosylase BCQ_1526 PF00905 Penicillin binding protein transpeptidase domain BCQ_1528 PF00512 His Kinase A (phospho-acceptor) domain BCQ_1528 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCQ_1528 PF00989 PAS fold BCQ_1529 PF01904 Protein of unknown function DUF72 BCQ_1531 PF00589 Phage integrase family BCQ_1532 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCQ_1532 PF16736 Single Cache-like BCQ_1532 PF00989 PAS fold BCQ_1532 PF00512 His Kinase A (phospho-acceptor) domain BCQ_1533 PF01048 Phosphorylase superfamily BCQ_1535 PF09924 Uncharacterised conserved protein (DUF2156) BCQ_1535 PF03706 Lysylphosphatidylglycerol synthase TM region BCQ_1538 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BCQ_1538 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BCQ_1539 PF07943 Penicillin-binding protein 5, C-terminal domain BCQ_1539 PF00768 D-alanyl-D-alanine carboxypeptidase BCQ_1540 PF07670 Nucleoside recognition BCQ_1541 PF07670 Nucleoside recognition BCQ_1542 PF00849 RNA pseudouridylate synthase BCQ_1542 PF01479 S4 domain BCQ_1543 PF00578 AhpC/TSA family BCQ_1544 PF05140 ResB-like family BCQ_1545 PF01578 Cytochrome C assembly protein BCQ_1546 PF00486 Transcriptional regulatory protein, C terminal BCQ_1546 PF00072 Response regulator receiver domain BCQ_1547 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCQ_1547 PF18698 Histidine kinase sensor domain BCQ_1547 PF00672 HAMP domain BCQ_1547 PF00512 His Kinase A (phospho-acceptor) domain BCQ_1547 PF00989 PAS fold BCQ_1548 PF01923 Cobalamin adenosyltransferase BCQ_1549 PF01551 Peptidase family M23 BCQ_1551 PF12822 ECF transporter, substrate-specific component BCQ_1554 PF00270 DEAD/DEAH box helicase BCQ_1554 PF00271 Helicase conserved C-terminal domain BCQ_1555 PF02517 CPBP intramembrane metalloprotease BCQ_1557 PF00149 Calcineurin-like phosphoesterase BCQ_1559 PF05389 Negative regulator of genetic competence (MecA) BCQ_1560 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BCQ_1560 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BCQ_1565 PF17763 Glutaminase/Asparaginase C-terminal domain BCQ_1565 PF00710 Asparaginase, N-terminal BCQ_1566 PF02224 Cytidylate kinase BCQ_1568 PF00575 S1 RNA binding domain BCQ_1569 PF01070 FMN-dependent dehydrogenase BCQ_1571 PF14045 YIEGIA protein BCQ_1573 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal BCQ_1573 PF01926 50S ribosome-binding GTPase BCQ_1574 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus BCQ_1574 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus BCQ_1576 PF10966 Protein of unknown function (DUF2768) BCQ_1578 PF09547 Stage IV sporulation protein A (spore_IV_A) BCQ_1579 PF00216 Bacterial DNA-binding protein BCQ_1580 PF01227 GTP cyclohydrolase I BCQ_1581 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 BCQ_1582 PF01209 ubiE/COQ5 methyltransferase family BCQ_1583 PF00348 Polyprenyl synthetase BCQ_1584 PF00334 Nucleoside diphosphate kinase BCQ_1585 PF01264 Chorismate synthase BCQ_1586 PF01761 3-dehydroquinate synthase BCQ_1587 PF00155 Aminotransferase class I and II BCQ_1589 PF08858 IDEAL domain BCQ_1589 PF08864 UPF0302 domain BCQ_1590 PF10673 Protein of unknown function (DUF2487) BCQ_1591 PF00355 Rieske [2Fe-2S] domain BCQ_1592 PF00033 Cytochrome b/b6/petB BCQ_1593 PF00032 Cytochrome b(C-terminal)/b6/petD BCQ_1593 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BCQ_1595 PF07187 Protein of unknown function (DUF1405) BCQ_1597 PF09577 Sporulation protein YpjB (SpoYpjB) BCQ_1598 PF04298 Putative neutral zinc metallopeptidase BCQ_1600 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BCQ_1600 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BCQ_1601 PF03819 MazG nucleotide pyrophosphohydrolase domain BCQ_1602 PF01113 Dihydrodipicolinate reductase, N-terminus BCQ_1602 PF05173 Dihydrodipicolinate reductase, C-terminus BCQ_1603 PF02142 MGS-like domain BCQ_1604 PF02585 GlcNAc-PI de-N-acetylase BCQ_1605 PF00534 Glycosyl transferases group 1 BCQ_1605 PF13439 Glycosyltransferase Family 4 BCQ_1606 PF13735 tRNA nucleotidyltransferase domain 2 putative BCQ_1606 PF12627 Probable RNA and SrmB- binding site of polymerase A BCQ_1606 PF01743 Poly A polymerase head domain BCQ_1607 PF08279 HTH domain BCQ_1607 PF03099 Biotin/lipoate A/B protein ligase family BCQ_1607 PF02237 Biotin protein ligase C terminal domain BCQ_1608 PF02548 Ketopantoate hydroxymethyltransferase BCQ_1609 PF02569 Pantoate-beta-alanine ligase BCQ_1610 PF02261 Aspartate decarboxylase BCQ_1611 PF00929 Exonuclease BCQ_1611 PF04851 Type III restriction enzyme, res subunit BCQ_1611 PF13307 Helicase C-terminal domain BCQ_1612 PF14084 Protein of unknown function (DUF4264) BCQ_1614 PF00155 Aminotransferase class I and II BCQ_1615 PF07261 Replication initiation and membrane attachment BCQ_1616 PF10576 Iron-sulfur binding domain of endonuclease III BCQ_1616 PF00633 Helix-hairpin-helix motif BCQ_1616 PF00730 HhH-GPD superfamily base excision DNA repair protein BCQ_1618 PF00912 Transglycosylase BCQ_1618 PF00905 Penicillin binding protein transpeptidase domain BCQ_1619 PF03838 Recombination protein U BCQ_1620 PF10720 Protein of unknown function (DUF2515) BCQ_1627 PF06908 YspA SLOG family BCQ_1628 PF05103 DivIVA protein BCQ_1629 PF01170 Putative RNA methylase family UPF0020 BCQ_1629 PF02926 THUMP domain BCQ_1631 PF13307 Helicase C-terminal domain BCQ_1632 PF02074 Carboxypeptidase Taq (M32) metallopeptidase BCQ_1634 PF00557 Metallopeptidase family M24 BCQ_1635 PF00156 Phosphoribosyl transferase domain BCQ_1636 PF00860 Permease family BCQ_1637 PF04235 Protein of unknown function (DUF418) BCQ_1638 PF00350 Dynamin family BCQ_1639 PF00583 Acetyltransferase (GNAT) family BCQ_1640 PF10752 Protein of unknown function (DUF2533) BCQ_1641 PF00581 Rhodanese-like domain BCQ_1644 PF03738 Glutathionylspermidine synthase preATP-grasp BCQ_1646 PF00690 Cation transporter/ATPase, N-terminus BCQ_1646 PF00689 Cation transporting ATPase, C-terminus BCQ_1647 PF01367 5'-3' exonuclease, C-terminal SAM fold BCQ_1647 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BCQ_1651 PF18014 Acetyltransferase (GNAT) domain BCQ_1651 PF13673 Acetyltransferase (GNAT) domain BCQ_1655 PF13456 Reverse transcriptase-like BCQ_1656 PF01263 Aldose 1-epimerase BCQ_1661 PF00313 'Cold-shock' DNA-binding domain BCQ_1662 PF08892 YqcI/YcgG family BCQ_1663 PF01810 LysE type translocator BCQ_1666 PF04341 Protein of unknown function, DUF485 BCQ_1667 PF00474 Sodium:solute symporter family BCQ_1668 PF00202 Aminotransferase class-III BCQ_1670 PF00999 Sodium/hydrogen exchanger family BCQ_1672 PF17770 Ribonuclease J C-terminal domain BCQ_1672 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain BCQ_1672 PF00753 Metallo-beta-lactamase superfamily BCQ_1673 PF06445 GyrI-like small molecule binding domain BCQ_1673 PF13411 MerR HTH family regulatory protein BCQ_1675 PF04239 Protein of unknown function (DUF421) BCQ_1677 PF02698 DUF218 domain BCQ_1679 PF00881 Nitroreductase family BCQ_1684 PF07690 Major Facilitator Superfamily BCQ_1689 PF17209 Hfq protein BCQ_1691 PF01618 MotA/TolQ/ExbB proton channel family BCQ_1692 PF13677 Membrane MotB of proton-channel complex MotA/MotB BCQ_1692 PF00691 OmpA family BCQ_1693 PF00072 Response regulator receiver domain BCQ_1694 PF02895 Signal transducing histidine kinase, homodimeric domain BCQ_1694 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCQ_1694 PF01584 CheW-like domain BCQ_1694 PF07194 P2 response regulator binding domain BCQ_1694 PF01627 Hpt domain BCQ_1695 PF04509 CheC-like family BCQ_1695 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BCQ_1698 PF03705 CheR methyltransferase, all-alpha domain BCQ_1698 PF01739 CheR methyltransferase, SAM binding domain BCQ_1702 PF00460 Flagella basal body rod protein BCQ_1702 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BCQ_1703 PF00669 Bacterial flagellin N-terminal helical region BCQ_1703 PF00700 Bacterial flagellin C-terminal helical region BCQ_1704 PF02465 Flagellar hook-associated protein 2 N-terminus BCQ_1704 PF07196 Flagellin hook IN motif BCQ_1704 PF07195 Flagellar hook-associated protein 2 C-terminus BCQ_1707 PF00460 Flagella basal body rod protein BCQ_1708 PF00460 Flagella basal body rod protein BCQ_1708 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BCQ_1709 PF02049 Flagellar hook-basal body complex protein FliE BCQ_1710 PF01514 Secretory protein of YscJ/FliF family BCQ_1710 PF08345 Flagellar M-ring protein C-terminal BCQ_1711 PF14842 FliG N-terminal domain BCQ_1711 PF14841 FliG middle domain BCQ_1711 PF01706 FliG C-terminal domain BCQ_1713 PF18269 T3SS EscN ATPase C-terminal domain BCQ_1713 PF02874 ATP synthase alpha/beta family, beta-barrel domain BCQ_1713 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BCQ_1717 PF07559 Flagellar basal body protein FlaE BCQ_1717 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BCQ_1717 PF00460 Flagella basal body rod protein BCQ_1720 PF01584 CheW-like domain BCQ_1720 PF00072 Response regulator receiver domain BCQ_1721 PF12181 DNA binding domain of the motility gene repressor (MogR) BCQ_1722 PF00700 Bacterial flagellin C-terminal helical region BCQ_1722 PF00669 Bacterial flagellin N-terminal helical region BCQ_1723 PF00669 Bacterial flagellin N-terminal helical region BCQ_1723 PF08884 Flagellin D3 domain BCQ_1723 PF00700 Bacterial flagellin C-terminal helical region BCQ_1724 PF01464 Transglycosylase SLT domain BCQ_1726 PF02154 Flagellar motor switch protein FliM BCQ_1726 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BCQ_1727 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BCQ_1727 PF04509 CheC-like family BCQ_1729 PF00813 FliP family BCQ_1730 PF01313 Bacterial export proteins, family 3 BCQ_1732 PF01312 FlhB HrpN YscU SpaS Family BCQ_1733 PF00771 FHIPEP family BCQ_1734 PF00448 SRP54-type protein, GTPase domain BCQ_1735 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BCQ_1735 PF00460 Flagella basal body rod protein BCQ_1740 PF00440 Bacterial regulatory proteins, tetR family BCQ_1740 PF17932 Tetracyclin repressor-like, C-terminal domain BCQ_1743 PF03992 Antibiotic biosynthesis monooxygenase BCQ_1745 PF05737 Collagen binding domain BCQ_1745 PF05738 Cna protein B-type domain BCQ_1745 PF17802 Prealbumin-like fold domain BCQ_1746 PF04203 Sortase domain BCQ_1747 PF04203 Sortase domain BCQ_1748 PF08141 Small acid-soluble spore protein H family BCQ_1754 PF08402 TOBE domain BCQ_1754 PF00005 ABC transporter BCQ_1756 PF00528 Binding-protein-dependent transport system inner membrane component BCQ_1757 PF12706 Beta-lactamase superfamily domain BCQ_1757 PF00753 Metallo-beta-lactamase superfamily BCQ_1759 PF10787 Uncharacterised protein from bacillus cereus group BCQ_1762 PF00768 D-alanyl-D-alanine carboxypeptidase BCQ_1762 PF07943 Penicillin-binding protein 5, C-terminal domain BCQ_1763 PF13021 Domain of unknown function (DUF3885) BCQ_1764 PF00300 Histidine phosphatase superfamily (branch 1) BCQ_1768 PF01047 MarR family BCQ_1770 PF13537 Glutamine amidotransferase domain BCQ_1770 PF00733 Asparagine synthase BCQ_1774 PF01545 Cation efflux family BCQ_1774 PF16916 Dimerisation domain of Zinc Transporter BCQ_1776 PF00392 Bacterial regulatory proteins, gntR family BCQ_1776 PF07729 FCD domain BCQ_1777 PF00892 EamA-like transporter family BCQ_1778 PF00535 Glycosyl transferase family 2 BCQ_1779 PF03553 Na+/H+ antiporter family BCQ_1780 PF10415 Fumarase C C-terminus BCQ_1780 PF00206 Lyase BCQ_1784 PF01554 MatE BCQ_1785 PF03575 Peptidase family S51 BCQ_1789 PF00578 AhpC/TSA family BCQ_1792 PF00291 Pyridoxal-phosphate dependent enzyme BCQ_1793 PF00291 Pyridoxal-phosphate dependent enzyme BCQ_1794 PF04286 Protein of unknown function (DUF445) BCQ_1799 PF00072 Response regulator receiver domain BCQ_1799 PF00196 Bacterial regulatory proteins, luxR family BCQ_1800 PF07730 Histidine kinase BCQ_1800 PF13492 GAF domain BCQ_1800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCQ_1800 PF13185 GAF domain BCQ_1801 PF00005 ABC transporter BCQ_1804 PF13091 PLD-like domain BCQ_1805 PF07730 Histidine kinase BCQ_1805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCQ_1806 PF00072 Response regulator receiver domain BCQ_1806 PF00196 Bacterial regulatory proteins, luxR family BCQ_1810 PF00696 Amino acid kinase family BCQ_1811 PF00375 Sodium:dicarboxylate symporter family BCQ_1812 PF00206 Lyase BCQ_1812 PF10415 Fumarase C C-terminus BCQ_1813 PF03949 Malic enzyme, NAD binding domain BCQ_1813 PF00390 Malic enzyme, N-terminal domain BCQ_1814 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCQ_1815 PF08664 YcbB domain BCQ_1815 PF00072 Response regulator receiver domain BCQ_1816 PF04434 SWIM zinc finger BCQ_1816 PF00271 Helicase conserved C-terminal domain BCQ_1816 PF00176 SNF2 family N-terminal domain BCQ_1818 PF03590 Aspartate-ammonia ligase BCQ_1819 PF01381 Helix-turn-helix BCQ_1820 PF00696 Amino acid kinase family BCQ_1820 PF13840 ACT domain BCQ_1822 PF13761 Domain of unknown function (DUF4166) BCQ_1823 PF14158 YndJ-like protein BCQ_1824 PF00293 NUDIX domain BCQ_1825 PF02368 Bacterial Ig-like domain (group 2) BCQ_1825 PF00395 S-layer homology domain BCQ_1825 PF13205 Bacterial Ig-like domain BCQ_1827 PF07690 Major Facilitator Superfamily BCQ_1830 PF02554 Carbon starvation protein CstA BCQ_1831 PF03976 Polyphosphate kinase 2 (PPK2) BCQ_1832 PF03551 Transcriptional regulator PadR-like family BCQ_1832 PF10400 Virulence activator alpha C-term BCQ_1833 PF07690 Major Facilitator Superfamily BCQ_1834 PF07690 Major Facilitator Superfamily BCQ_1835 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BCQ_1835 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BCQ_1837 PF01926 50S ribosome-binding GTPase BCQ_1837 PF13167 GTP-binding GTPase N-terminal BCQ_1837 PF16360 GTP-binding GTPase Middle Region BCQ_1838 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BCQ_1839 PF07690 Major Facilitator Superfamily BCQ_1840 PF00291 Pyridoxal-phosphate dependent enzyme BCQ_1843 PF01943 Polysaccharide biosynthesis protein BCQ_1843 PF14667 Polysaccharide biosynthesis C-terminal domain BCQ_1844 PF00209 Sodium:neurotransmitter symporter family BCQ_1845 PF03422 Carbohydrate binding module (family 6) BCQ_1845 PF01522 Polysaccharide deacetylase BCQ_1845 PF00457 Glycosyl hydrolases family 11 BCQ_1847 PF04239 Protein of unknown function (DUF421) BCQ_1849 PF01625 Peptide methionine sulfoxide reductase BCQ_1850 PF01063 Amino-transferase class IV BCQ_1851 PF00205 Thiamine pyrophosphate enzyme, central domain BCQ_1851 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BCQ_1851 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BCQ_1852 PF10369 Small subunit of acetolactate synthase BCQ_1853 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain BCQ_1853 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain BCQ_1854 PF00920 Dehydratase family BCQ_1855 PF00585 C-terminal regulatory domain of Threonine dehydratase BCQ_1855 PF00291 Pyridoxal-phosphate dependent enzyme BCQ_1856 PF09587 Bacterial capsule synthesis protein PGA_cap BCQ_1859 PF07690 Major Facilitator Superfamily BCQ_1860 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase BCQ_1862 PF00072 Response regulator receiver domain BCQ_1862 PF04397 LytTr DNA-binding domain BCQ_1863 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain BCQ_1863 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain BCQ_1866 PF01979 Amidohydrolase family BCQ_1867 PF12146 Serine aminopeptidase, S33 BCQ_1867 PF13026 Protein of unknown function (DUF3887) BCQ_1868 PF00005 ABC transporter BCQ_1869 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BCQ_1870 PF13302 Acetyltransferase (GNAT) domain BCQ_1871 PF00486 Transcriptional regulatory protein, C terminal BCQ_1871 PF00072 Response regulator receiver domain BCQ_1872 PF00512 His Kinase A (phospho-acceptor) domain BCQ_1872 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCQ_1874 PF01566 Natural resistance-associated macrophage protein BCQ_1877 PF08546 Ketopantoate reductase PanE/ApbA C terminal BCQ_1877 PF02558 Ketopantoate reductase PanE/ApbA BCQ_1879 PF13520 Amino acid permease BCQ_1881 PF05791 Bacillus haemolytic enterotoxin (HBL) BCQ_1882 PF05791 Bacillus haemolytic enterotoxin (HBL) BCQ_1883 PF18801 response regulator aspartate phosphatase H, N terminal BCQ_1886 PF04198 Putative sugar-binding domain BCQ_1887 PF01791 DeoC/LacD family aldolase BCQ_1888 PF07662 Na+ dependent nucleoside transporter C-terminus BCQ_1888 PF01773 Na+ dependent nucleoside transporter N-terminus BCQ_1889 PF02885 Glycosyl transferase family, helical bundle domain BCQ_1889 PF00591 Glycosyl transferase family, a/b domain BCQ_1889 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain BCQ_1890 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BCQ_1891 PF07301 Protein of unknown function (DUF1453) BCQ_1892 PF05979 Bacterial protein of unknown function (DUF896) BCQ_1893 PF05195 Aminopeptidase P, N-terminal domain BCQ_1893 PF00557 Metallopeptidase family M24 BCQ_1898 PF07690 Major Facilitator Superfamily BCQ_1900 PF02525 Flavodoxin-like fold BCQ_1901 PF05525 Branched-chain amino acid transport protein BCQ_1903 PF04234 CopC domain BCQ_1903 PF05425 Copper resistance protein D BCQ_1903 PF13115 YtkA-like BCQ_1904 PF07987 Domain of unkown function (DUF1775) BCQ_1905 PF07987 Domain of unkown function (DUF1775) BCQ_1906 PF00892 EamA-like transporter family BCQ_1907 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BCQ_1907 PF03466 LysR substrate binding domain BCQ_1908 PF02082 Transcriptional regulator BCQ_1909 PF01323 DSBA-like thioredoxin domain BCQ_1910 PF00881 Nitroreductase family BCQ_1912 PF01425 Amidase BCQ_1913 PF01594 AI-2E family transporter BCQ_1914 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BCQ_1914 PF00056 lactate/malate dehydrogenase, NAD binding domain BCQ_1915 PF01593 Flavin containing amine oxidoreductase BCQ_1916 PF07683 Cobalamin synthesis protein cobW C-terminal domain BCQ_1916 PF02492 CobW/HypB/UreG, nucleotide-binding domain BCQ_1918 PF12399 Branched-chain amino acid ATP-binding cassette transporter BCQ_1918 PF00005 ABC transporter BCQ_1919 PF00005 ABC transporter BCQ_1920 PF02653 Branched-chain amino acid transport system / permease component BCQ_1922 PF03466 LysR substrate binding domain BCQ_1922 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BCQ_1924 PF14552 Tautomerase enzyme BCQ_1926 PF01047 MarR family BCQ_1928 PF01654 Cytochrome bd terminal oxidase subunit I BCQ_1929 PF02322 Cytochrome bd terminal oxidase subunit II BCQ_1930 PF00664 ABC transporter transmembrane region BCQ_1930 PF00005 ABC transporter BCQ_1931 PF00664 ABC transporter transmembrane region BCQ_1931 PF00005 ABC transporter BCQ_1933 PF00535 Glycosyl transferase family 2 BCQ_1934 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BCQ_1935 PF00132 Bacterial transferase hexapeptide (six repeats) BCQ_1940 PF17676 LD-carboxypeptidase C-terminal domain BCQ_1940 PF02016 LD-carboxypeptidase N-terminal domain BCQ_1941 PF07943 Penicillin-binding protein 5, C-terminal domain BCQ_1941 PF00768 D-alanyl-D-alanine carboxypeptidase BCQ_1944 PF00877 NlpC/P60 family BCQ_1944 PF01476 LysM domain BCQ_1946 PF00005 ABC transporter BCQ_1946 PF00664 ABC transporter transmembrane region BCQ_1947 PF00486 Transcriptional regulatory protein, C terminal BCQ_1947 PF00072 Response regulator receiver domain BCQ_1948 PF00512 His Kinase A (phospho-acceptor) domain BCQ_1948 PF16736 Single Cache-like BCQ_1948 PF00989 PAS fold BCQ_1948 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCQ_1949 PF00106 short chain dehydrogenase BCQ_1951 PF04439 Streptomycin adenylyltransferase BCQ_1952 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain BCQ_1952 PF01522 Polysaccharide deacetylase BCQ_1957 PF03447 Homoserine dehydrogenase, NAD binding domain BCQ_1957 PF00742 Homoserine dehydrogenase BCQ_1957 PF01842 ACT domain BCQ_1958 PF00291 Pyridoxal-phosphate dependent enzyme BCQ_1959 PF00288 GHMP kinases N terminal domain BCQ_1959 PF08544 GHMP kinases C terminal BCQ_1962 PF03816 Cell envelope-related transcriptional attenuator domain BCQ_1963 PF00512 His Kinase A (phospho-acceptor) domain BCQ_1963 PF18698 Histidine kinase sensor domain BCQ_1963 PF00672 HAMP domain BCQ_1963 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCQ_1964 PF01522 Polysaccharide deacetylase BCQ_1966 PF02308 MgtC family BCQ_1967 PF00583 Acetyltransferase (GNAT) family BCQ_1968 PF00269 Small, acid-soluble spore proteins, alpha/beta type BCQ_1969 PF07690 Major Facilitator Superfamily BCQ_1970 PF01810 LysE type translocator BCQ_1971 PF00155 Aminotransferase class I and II BCQ_1971 PF00392 Bacterial regulatory proteins, gntR family BCQ_1973 PF01734 Patatin-like phospholipase BCQ_1978 PF13344 Haloacid dehalogenase-like hydrolase BCQ_1978 PF00293 NUDIX domain BCQ_1979 PF02540 NAD synthase BCQ_1980 PF02687 FtsX-like permease family BCQ_1981 PF18277 AbrB C-terminal domain BCQ_1981 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin BCQ_1982 PF00082 Subtilase family BCQ_1983 PF00005 ABC transporter BCQ_1983 PF03459 TOBE domain BCQ_1983 PF17912 MalK OB fold domain BCQ_1984 PF13556 PucR C-terminal helix-turn-helix domain BCQ_1985 PF01547 Bacterial extracellular solute-binding protein BCQ_1986 PF12833 Helix-turn-helix domain BCQ_1987 PF00528 Binding-protein-dependent transport system inner membrane component BCQ_1988 PF00528 Binding-protein-dependent transport system inner membrane component BCQ_1989 PF17386 Lacto-N-biose phosphorylase C-terminal domain BCQ_1989 PF09508 Lacto-N-biose phosphorylase N-terminal TIM barrel domain BCQ_1989 PF17385 Lacto-N-biose phosphorylase central domain BCQ_1991 PF00480 ROK family BCQ_1992 PF01380 SIS domain BCQ_1993 PF01979 Amidohydrolase family BCQ_1994 PF00294 pfkB family carbohydrate kinase BCQ_1995 PF01791 DeoC/LacD family aldolase BCQ_1996 PF00754 F5/8 type C domain BCQ_1996 PF18080 Galactose mutarotase-like fold domain BCQ_1996 PF17995 Endo-alpha-N-acetylgalactosaminidase N-terminal BCQ_1996 PF17451 Glycosyl hydrolase 101 beta sandwich domain BCQ_1996 PF12905 Endo-alpha-N-acetylgalactosaminidase BCQ_1996 PF17974 Galactose-binding domain-like BCQ_1996 PF04650 YSIRK type signal peptide BCQ_1997 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain BCQ_1997 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain BCQ_1998 PF01022 Bacterial regulatory protein, arsR family BCQ_1999 PF00248 Aldo/keto reductase family BCQ_2000 PF07690 Major Facilitator Superfamily BCQ_2004 PF03193 RsgA GTPase BCQ_2005 PF02743 Cache domain BCQ_2005 PF00672 HAMP domain BCQ_2005 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BCQ_2009 PF00210 Ferritin-like domain BCQ_2013 PF00296 Luciferase-like monooxygenase BCQ_2015 PF01593 Flavin containing amine oxidoreductase BCQ_2016 PF13302 Acetyltransferase (GNAT) domain BCQ_2017 PF00248 Aldo/keto reductase family BCQ_2018 PF07683 Cobalamin synthesis protein cobW C-terminal domain BCQ_2018 PF02492 CobW/HypB/UreG, nucleotide-binding domain BCQ_2019 PF00583 Acetyltransferase (GNAT) family BCQ_2020 PF01297 Zinc-uptake complex component A periplasmic BCQ_2020 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment BCQ_2022 PF13460 NAD(P)H-binding BCQ_2023 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BCQ_2024 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain BCQ_2024 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BCQ_2026 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BCQ_2027 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BCQ_2031 PF08757 CotH kinase protein BCQ_2032 PF00293 NUDIX domain BCQ_2033 PF09335 SNARE associated Golgi protein BCQ_2034 PF14667 Polysaccharide biosynthesis C-terminal domain BCQ_2034 PF01943 Polysaccharide biosynthesis protein BCQ_2036 PF03773 Predicted permease BCQ_2037 PF09323 Domain of unknown function (DUF1980) BCQ_2038 PF03061 Thioesterase superfamily BCQ_2039 PF13091 PLD-like domain BCQ_2039 PF13396 Phospholipase_D-nuclease N-terminal BCQ_2042 PF13460 NAD(P)H-binding BCQ_2043 PF04306 Protein of unknown function (DUF456) BCQ_2044 PF00571 CBS domain BCQ_2044 PF03471 Transporter associated domain BCQ_2044 PF01595 Cyclin M transmembrane N-terminal domain BCQ_2047 PF05525 Branched-chain amino acid transport protein BCQ_2048 PF01588 Putative tRNA binding domain BCQ_2050 PF07454 Stage II sporulation protein P (SpoIIP) BCQ_2052 PF02557 D-alanyl-D-alanine carboxypeptidase BCQ_2054 PF01425 Amidase BCQ_2055 PF07690 Major Facilitator Superfamily BCQ_2057 PF01145 SPFH domain / Band 7 family BCQ_2058 PF00300 Histidine phosphatase superfamily (branch 1) BCQ_2061 PF01168 Alanine racemase, N-terminal domain BCQ_2061 PF00842 Alanine racemase, C-terminal domain BCQ_2065 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase BCQ_2066 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BCQ_2066 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BCQ_2067 PF00155 Aminotransferase class I and II BCQ_2067 PF00392 Bacterial regulatory proteins, gntR family BCQ_2074 PF00583 Acetyltransferase (GNAT) family BCQ_2079 PF09579 Sporulation protein YtfJ (Spore_YtfJ) BCQ_2084 PF01209 ubiE/COQ5 methyltransferase family BCQ_2085 PF01268 Formate--tetrahydrofolate ligase BCQ_2087 PF00271 Helicase conserved C-terminal domain BCQ_2087 PF00270 DEAD/DEAH box helicase BCQ_2088 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BCQ_2090 PF08240 Alcohol dehydrogenase GroES-like domain BCQ_2090 PF00107 Zinc-binding dehydrogenase BCQ_2091 PF04542 Sigma-70 region 2 BCQ_2091 PF08281 Sigma-70, region 4 BCQ_2094 PF01613 Flavin reductase like domain BCQ_2094 PF00258 Flavodoxin BCQ_2096 PF00255 Glutathione peroxidase BCQ_2097 PF13559 Domain of unknown function (DUF4129) BCQ_2097 PF01841 Transglutaminase-like superfamily BCQ_2097 PF11992 Domain of unknown function (DUF3488) BCQ_2098 PF01882 Protein of unknown function DUF58 BCQ_2099 PF07726 ATPase family associated with various cellular activities (AAA) BCQ_2099 PF17863 AAA lid domain BCQ_2102 PF14710 Respiratory nitrate reductase alpha N-terminal BCQ_2102 PF01568 Molydopterin dinucleotide binding domain BCQ_2102 PF00384 Molybdopterin oxidoreductase BCQ_2103 PF14711 Respiratory nitrate reductase beta C-terminal BCQ_2103 PF13247 4Fe-4S dicluster domain BCQ_2104 PF02613 Nitrate reductase delta subunit BCQ_2105 PF02665 Nitrate reductase gamma subunit BCQ_2106 PF00325 Bacterial regulatory proteins, crp family BCQ_2106 PF00027 Cyclic nucleotide-binding domain BCQ_2107 PF04055 Radical SAM superfamily BCQ_2107 PF06463 Molybdenum Cofactor Synthesis C BCQ_2108 PF00899 ThiF family BCQ_2109 PF03454 MoeA C-terminal region (domain IV) BCQ_2109 PF03453 MoeA N-terminal region (domain I and II) BCQ_2109 PF00994 Probable molybdopterin binding domain BCQ_2110 PF02391 MoaE protein BCQ_2112 PF07690 Major Facilitator Superfamily BCQ_2118 PF01903 CbiX BCQ_2119 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BCQ_2120 PF00355 Rieske [2Fe-2S] domain BCQ_2121 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BCQ_2121 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BCQ_2121 PF04324 BFD-like [2Fe-2S] binding domain BCQ_2121 PF07992 Pyridine nucleotide-disulphide oxidoreductase BCQ_2121 PF18267 Rubredoxin NAD+ reductase C-terminal domain BCQ_2122 PF01814 Hemerythrin HHE cation binding domain BCQ_2122 PF04405 Domain of Unknown function (DUF542) BCQ_2129 PF04232 Stage V sporulation protein S (SpoVS) BCQ_2133 PF01966 HD domain BCQ_2134 PF12848 ABC transporter BCQ_2134 PF16326 ABC transporter C-terminal domain BCQ_2134 PF00005 ABC transporter BCQ_2135 PF01348 Type II intron maturase BCQ_2135 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) BCQ_2136 PF12848 ABC transporter BCQ_2136 PF00005 ABC transporter BCQ_2136 PF16326 ABC transporter C-terminal domain BCQ_2139 PF00436 Single-strand binding protein family BCQ_2141 PF01494 FAD binding domain BCQ_2142 PF08712 Scaffold protein Nfu/NifU N terminal BCQ_2142 PF13769 Virulence factor BCQ_2144 PF06491 Disulphide isomerase BCQ_2145 PF04445 Putative SAM-dependent methyltransferase BCQ_2146 PF03485 Arginyl tRNA synthetase N terminal domain BCQ_2146 PF05746 DALR anticodon binding domain BCQ_2146 PF00750 tRNA synthetases class I (R) BCQ_2149 PF00133 tRNA synthetases class I (I, L, M and V) BCQ_2149 PF08264 Anticodon-binding domain of tRNA BCQ_2152 PF01225 Mur ligase family, catalytic domain BCQ_2152 PF08245 Mur ligase middle domain BCQ_2152 PF02875 Mur ligase family, glutamate ligase domain BCQ_2153 PF00152 tRNA synthetases class II (D, K and N) BCQ_2153 PF01336 OB-fold nucleic acid binding domain BCQ_2154 PF00209 Sodium:neurotransmitter symporter family BCQ_2157 PF10997 Alternate to MurJ BCQ_2158 PF13419 Haloacid dehalogenase-like hydrolase BCQ_2160 PF00465 Iron-containing alcohol dehydrogenase BCQ_2161 PF01177 Asp/Glu/Hydantoin racemase BCQ_2162 PF01980 tRNA-methyltransferase O BCQ_2163 PF00583 Acetyltransferase (GNAT) family BCQ_2166 PF00005 ABC transporter BCQ_2167 PF05975 Bacterial ABC transporter protein EcsB BCQ_2168 PF14005 YpjP-like protein BCQ_2169 PF13419 Haloacid dehalogenase-like hydrolase BCQ_2172 PF00144 Beta-lactamase BCQ_2172 PF07930 D-aminopeptidase, domain B BCQ_2174 PF00303 Thymidylate synthase BCQ_2175 PF00186 Dihydrofolate reductase BCQ_2176 PF00905 Penicillin binding protein transpeptidase domain BCQ_2176 PF05223 NTF2-like N-terminal transpeptidase domain BCQ_2176 PF03717 Penicillin-binding Protein dimerisation domain BCQ_2177 PF02525 Flavodoxin-like fold BCQ_2178 PF01553 Acyltransferase BCQ_2179 PF03006 Haemolysin-III related BCQ_2180 PF02416 mttA/Hcf106 family BCQ_2181 PF00902 Sec-independent protein translocase protein (TatC) BCQ_2184 PF02645 Uncharacterised protein, DegV family COG1307 BCQ_2186 PF02630 SCO1/SenC BCQ_2187 PF00011 Hsp20/alpha crystallin family BCQ_2188 PF13537 Glutamine amidotransferase domain BCQ_2188 PF00733 Asparagine synthase BCQ_2191 PF01497 Periplasmic binding protein BCQ_2192 PF01063 Amino-transferase class IV BCQ_2193 PF00881 Nitroreductase family BCQ_2195 PF00857 Isochorismatase family BCQ_2196 PF00293 NUDIX domain BCQ_2197 PF00011 Hsp20/alpha crystallin family BCQ_2198 PF00924 Mechanosensitive ion channel BCQ_2199 PF07730 Histidine kinase BCQ_2199 PF13185 GAF domain BCQ_2200 PF00196 Bacterial regulatory proteins, luxR family BCQ_2200 PF00072 Response regulator receiver domain BCQ_2201 PF01380 SIS domain BCQ_2201 PF01418 Helix-turn-helix domain, rpiR family BCQ_2202 PF13580 SIS domain BCQ_2203 PF00107 Zinc-binding dehydrogenase BCQ_2203 PF08240 Alcohol dehydrogenase GroES-like domain BCQ_2206 PF00144 Beta-lactamase BCQ_2208 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain BCQ_2208 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BCQ_2213 PF03358 NADPH-dependent FMN reductase BCQ_2216 PF00005 ABC transporter BCQ_2216 PF00571 CBS domain BCQ_2217 PF00528 Binding-protein-dependent transport system inner membrane component BCQ_2218 PF13520 Amino acid permease BCQ_2224 PF00571 CBS domain BCQ_2224 PF01595 Cyclin M transmembrane N-terminal domain BCQ_2224 PF03471 Transporter associated domain BCQ_2225 PF00512 His Kinase A (phospho-acceptor) domain BCQ_2225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCQ_2228 PF00202 Aminotransferase class-III BCQ_2229 PF01144 Coenzyme A transferase BCQ_2230 PF01144 Coenzyme A transferase BCQ_2231 PF01546 Peptidase family M20/M25/M40 BCQ_2231 PF07687 Peptidase dimerisation domain BCQ_2232 PF00583 Acetyltransferase (GNAT) family BCQ_2233 PF13426 PAS domain BCQ_2233 PF00158 Sigma-54 interaction domain BCQ_2233 PF02954 Bacterial regulatory protein, Fis family BCQ_2234 PF12544 Lysine-2,3-aminomutase BCQ_2235 PF14122 YokU-like protein, putative antitoxin BCQ_2236 PF06855 YozE SAM-like fold BCQ_2239 PF14162 YozD-like protein BCQ_2241 PF00069 Protein kinase domain BCQ_2241 PF08239 Bacterial SH3 domain BCQ_2242 PF07070 SpoOM protein BCQ_2243 PF01569 PAP2 superfamily BCQ_2244 PF01545 Cation efflux family BCQ_2244 PF16916 Dimerisation domain of Zinc Transporter BCQ_2245 PF00085 Thioredoxin BCQ_2249 PF10668 Phage terminase small subunit BCQ_2249 PF03592 Terminase small subunit BCQ_2255 PF08281 Sigma-70, region 4 BCQ_2255 PF04542 Sigma-70 region 2 BCQ_2265 PF10676 Spore germination protein gerPA/gerPF BCQ_2271 PF00905 Penicillin binding protein transpeptidase domain BCQ_2271 PF00912 Transglycosylase BCQ_2273 PF07690 Major Facilitator Superfamily BCQ_2274 PF01521 Iron-sulphur cluster biosynthesis BCQ_2275 PF00285 Citrate synthase, C-terminal domain BCQ_2276 PF03972 MmgE/PrpD family BCQ_2279 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BCQ_2279 PF02770 Acyl-CoA dehydrogenase, middle domain BCQ_2279 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BCQ_2280 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BCQ_2280 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BCQ_2281 PF00171 Aldehyde dehydrogenase family BCQ_2282 PF01810 LysE type translocator BCQ_2283 PF00378 Enoyl-CoA hydratase/isomerase BCQ_2285 PF10763 Protein of unknown function (DUF2584) BCQ_2286 PF00149 Calcineurin-like phosphoesterase BCQ_2286 PF12320 Type 5 capsule protein repressor C-terminal domain BCQ_2287 PF13476 AAA domain BCQ_2289 PF01022 Bacterial regulatory protein, arsR family BCQ_2293 PF07690 Major Facilitator Superfamily BCQ_2294 PF00106 short chain dehydrogenase BCQ_2295 PF00425 chorismate binding enzyme BCQ_2296 PF00501 AMP-binding enzyme BCQ_2296 PF13193 AMP-binding enzyme C-terminal domain BCQ_2297 PF00857 Isochorismatase family BCQ_2297 PF00550 Phosphopantetheine attachment site BCQ_2298 PF00501 AMP-binding enzyme BCQ_2298 PF13193 AMP-binding enzyme C-terminal domain BCQ_2298 PF00668 Condensation domain BCQ_2298 PF00550 Phosphopantetheine attachment site BCQ_2298 PF00975 Thioesterase domain BCQ_2299 PF03621 MbtH-like protein BCQ_2300 PF07690 Major Facilitator Superfamily BCQ_2303 PF00216 Bacterial DNA-binding protein BCQ_2305 PF05163 DinB family BCQ_2306 PF00082 Subtilase family BCQ_2307 PF01235 Sodium:alanine symporter family BCQ_2312 PF16291 Domain of unknown function (DUF4937 BCQ_2313 PF01479 S4 domain BCQ_2313 PF00849 RNA pseudouridylate synthase BCQ_2314 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BCQ_2314 PF03129 Anticodon binding domain BCQ_2314 PF02824 TGS domain BCQ_2314 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BCQ_2315 PF00005 ABC transporter BCQ_2317 PF07690 Major Facilitator Superfamily BCQ_2322 PF00205 Thiamine pyrophosphate enzyme, central domain BCQ_2322 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BCQ_2322 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BCQ_2331 PF03176 MMPL family BCQ_2335 PF00583 Acetyltransferase (GNAT) family BCQ_2343 PF08241 Methyltransferase domain BCQ_2344 PF13302 Acetyltransferase (GNAT) domain BCQ_2346 PF00313 'Cold-shock' DNA-binding domain BCQ_2352 PF01047 MarR family BCQ_2353 PF07690 Major Facilitator Superfamily BCQ_2354 PF03466 LysR substrate binding domain BCQ_2354 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BCQ_2355 PF01118 Semialdehyde dehydrogenase, NAD binding domain BCQ_2355 PF02774 Semialdehyde dehydrogenase, dimerisation domain BCQ_2358 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BCQ_2358 PF03466 LysR substrate binding domain BCQ_2359 PF03475 3-alpha domain BCQ_2359 PF03473 MOSC domain BCQ_2362 PF00664 ABC transporter transmembrane region BCQ_2362 PF00005 ABC transporter BCQ_2363 PF00005 ABC transporter BCQ_2363 PF00664 ABC transporter transmembrane region BCQ_2364 PF01810 LysE type translocator BCQ_2365 PF01381 Helix-turn-helix BCQ_2365 PF07883 Cupin domain BCQ_2372 PF00890 FAD binding domain BCQ_2373 PF04542 Sigma-70 region 2 BCQ_2373 PF08281 Sigma-70, region 4 BCQ_2373 PF12680 SnoaL-like domain BCQ_2380 PF02638 Glycosyl hydrolase-like 10 BCQ_2382 PF02378 Phosphotransferase system, EIIC BCQ_2383 PF03702 Anhydro-N-acetylmuramic acid kinase BCQ_2384 PF01869 BadF/BadG/BcrA/BcrD ATPase family BCQ_2385 PF02660 Glycerol-3-phosphate acyltransferase BCQ_2386 PF00266 Aminotransferase class-V BCQ_2387 PF00291 Pyridoxal-phosphate dependent enzyme BCQ_2390 PF00753 Metallo-beta-lactamase superfamily BCQ_2392 PF00271 Helicase conserved C-terminal domain BCQ_2392 PF00270 DEAD/DEAH box helicase BCQ_2397 PF17932 Tetracyclin repressor-like, C-terminal domain BCQ_2397 PF00440 Bacterial regulatory proteins, tetR family BCQ_2400 PF02687 FtsX-like permease family BCQ_2400 PF00005 ABC transporter BCQ_2400 PF12704 MacB-like periplasmic core domain BCQ_2401 PF09313 Domain of unknown function (DUF1971) BCQ_2401 PF03848 Tellurite resistance protein TehB BCQ_2404 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BCQ_2404 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BCQ_2404 PF00205 Thiamine pyrophosphate enzyme, central domain BCQ_2406 PF00300 Histidine phosphatase superfamily (branch 1) BCQ_2407 PF14171 Toxin SpoIISA, type II toxin-antitoxin system BCQ_2410 PF01546 Peptidase family M20/M25/M40 BCQ_2410 PF07687 Peptidase dimerisation domain BCQ_2413 PF04542 Sigma-70 region 2 BCQ_2413 PF08281 Sigma-70, region 4 BCQ_2415 PF00905 Penicillin binding protein transpeptidase domain BCQ_2415 PF03717 Penicillin-binding Protein dimerisation domain BCQ_2418 PF00149 Calcineurin-like phosphoesterase BCQ_2420 PF00005 ABC transporter BCQ_2422 PF08359 YsiA-like protein, C-terminal region BCQ_2422 PF00440 Bacterial regulatory proteins, tetR family BCQ_2425 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BCQ_2425 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BCQ_2425 PF02770 Acyl-CoA dehydrogenase, middle domain BCQ_2426 PF00289 Biotin carboxylase, N-terminal domain BCQ_2426 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BCQ_2426 PF02785 Biotin carboxylase C-terminal domain BCQ_2427 PF00364 Biotin-requiring enzyme BCQ_2428 PF00682 HMGL-like BCQ_2429 PF00378 Enoyl-CoA hydratase/isomerase BCQ_2430 PF01039 Carboxyl transferase domain BCQ_2431 PF13193 AMP-binding enzyme C-terminal domain BCQ_2431 PF16177 Acetyl-coenzyme A synthetase N-terminus BCQ_2431 PF00501 AMP-binding enzyme BCQ_2433 PF00485 Phosphoribulokinase / Uridine kinase family BCQ_2434 PF05163 DinB family BCQ_2435 PF00768 D-alanyl-D-alanine carboxypeptidase BCQ_2435 PF07943 Penicillin-binding protein 5, C-terminal domain BCQ_2436 PF00512 His Kinase A (phospho-acceptor) domain BCQ_2436 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCQ_2437 PF00072 Response regulator receiver domain BCQ_2437 PF00486 Transcriptional regulatory protein, C terminal BCQ_2438 PF01966 HD domain BCQ_2439 PF13021 Domain of unknown function (DUF3885) BCQ_2440 PF01048 Phosphorylase superfamily BCQ_2445 PF03413 Peptidase propeptide and YPEB domain BCQ_2445 PF01447 Thermolysin metallopeptidase, catalytic domain BCQ_2445 PF07504 Fungalysin/Thermolysin Propeptide Motif BCQ_2445 PF02868 Thermolysin metallopeptidase, alpha-helical domain BCQ_2449 PF02796 Helix-turn-helix domain of resolvase BCQ_2449 PF00665 Integrase core domain BCQ_2450 PF01695 IstB-like ATP binding protein BCQ_2451 PF00144 Beta-lactamase BCQ_2452 PF09278 MerR, DNA binding BCQ_2452 PF00376 MerR family regulatory protein BCQ_2453 PF07690 Major Facilitator Superfamily BCQ_2456 PF13847 Methyltransferase domain BCQ_2463 PF00155 Aminotransferase class I and II BCQ_2463 PF00392 Bacterial regulatory proteins, gntR family BCQ_2464 PF08240 Alcohol dehydrogenase GroES-like domain BCQ_2464 PF00107 Zinc-binding dehydrogenase BCQ_2466 PF04239 Protein of unknown function (DUF421) BCQ_2469 PF08450 SMP-30/Gluconolactonase/LRE-like region BCQ_2470 PF01921 tRNA synthetases class I (K) BCQ_2471 PF07486 Cell Wall Hydrolase BCQ_2472 PF03069 Acetamidase/Formamidase family BCQ_2473 PF00072 Response regulator receiver domain BCQ_2473 PF00486 Transcriptional regulatory protein, C terminal BCQ_2474 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCQ_2477 PF00005 ABC transporter BCQ_2478 PF02687 FtsX-like permease family BCQ_2482 PF01842 ACT domain BCQ_2482 PF00742 Homoserine dehydrogenase BCQ_2482 PF03447 Homoserine dehydrogenase, NAD binding domain BCQ_2483 PF00392 Bacterial regulatory proteins, gntR family BCQ_2483 PF00155 Aminotransferase class I and II BCQ_2484 PF01820 D-ala D-ala ligase N-terminus BCQ_2484 PF07478 D-ala D-ala ligase C-terminus BCQ_2485 PF03070 TENA/THI-4/PQQC family BCQ_2494 PF00067 Cytochrome P450 BCQ_2496 PF00132 Bacterial transferase hexapeptide (six repeats) BCQ_2497 PF07561 Domain of Unknown Function (DUF1540) BCQ_2501 PF00512 His Kinase A (phospho-acceptor) domain BCQ_2501 PF13426 PAS domain BCQ_2501 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCQ_2501 PF13188 PAS domain BCQ_2501 PF00989 PAS fold BCQ_2503 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase BCQ_2504 PF01177 Asp/Glu/Hydantoin racemase BCQ_2505 PF07155 ECF-type riboflavin transporter, S component BCQ_2506 PF00005 ABC transporter BCQ_2506 PF12558 ATP-binding cassette cobalt transporter BCQ_2508 PF09680 Family of unknown function BCQ_2509 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCQ_2509 PF00512 His Kinase A (phospho-acceptor) domain BCQ_2511 PF04229 GrpB protein BCQ_2512 PF00107 Zinc-binding dehydrogenase BCQ_2512 PF08240 Alcohol dehydrogenase GroES-like domain BCQ_2513 PF01569 PAP2 superfamily BCQ_2519 PF00144 Beta-lactamase BCQ_2525 PF07690 Major Facilitator Superfamily BCQ_2529 PF03009 Glycerophosphoryl diester phosphodiesterase family BCQ_2532 PF00155 Aminotransferase class I and II BCQ_2532 PF00392 Bacterial regulatory proteins, gntR family BCQ_2533 PF00892 EamA-like transporter family BCQ_2535 PF01784 NIF3 (NGG1p interacting factor 3) BCQ_2536 PF13344 Haloacid dehalogenase-like hydrolase BCQ_2536 PF00293 NUDIX domain BCQ_2540 PF07690 Major Facilitator Superfamily BCQ_2543 PF09297 NADH pyrophosphatase zinc ribbon domain BCQ_2543 PF00293 NUDIX domain BCQ_2544 PF02768 DNA polymerase III beta subunit, C-terminal domain BCQ_2544 PF00712 DNA polymerase III beta subunit, N-terminal domain BCQ_2544 PF02767 DNA polymerase III beta subunit, central domain BCQ_2545 PF00293 NUDIX domain BCQ_2550 PF09234 Domain of unknown function (DUF1963) BCQ_2555 PF01734 Patatin-like phospholipase BCQ_2556 PF08000 Bacterial PH domain BCQ_2558 PF12867 DinB superfamily BCQ_2561 PF02673 Bacitracin resistance protein BacA BCQ_2563 PF01541 GIY-YIG catalytic domain BCQ_2570 PF01266 FAD dependent oxidoreductase BCQ_2575 PF13419 Haloacid dehalogenase-like hydrolase BCQ_2577 PF01569 PAP2 superfamily BCQ_2578 PF00128 Alpha amylase, catalytic domain BCQ_2578 PF03714 Bacterial pullanase-associated domain BCQ_2578 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BCQ_2579 PF03413 Peptidase propeptide and YPEB domain BCQ_2579 PF07504 Fungalysin/Thermolysin Propeptide Motif BCQ_2579 PF01447 Thermolysin metallopeptidase, catalytic domain BCQ_2579 PF02868 Thermolysin metallopeptidase, alpha-helical domain BCQ_2583 PF00344 SecY translocase BCQ_2584 PF00308 Bacterial dnaA protein BCQ_2584 PF11638 DnaA N-terminal domain BCQ_2584 PF08299 Bacterial dnaA protein helix-turn-helix BCQ_2585 PF00561 alpha/beta hydrolase fold BCQ_2590 PF06081 Aromatic acid exporter family member 1 BCQ_2593 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) BCQ_2594 PF14620 YpeB sporulation BCQ_2594 PF03413 Peptidase propeptide and YPEB domain BCQ_2595 PF07486 Cell Wall Hydrolase BCQ_2595 PF01471 Putative peptidoglycan binding domain BCQ_2598 PF03301 Tryptophan 2,3-dioxygenase BCQ_2599 PF04199 Putative cyclase BCQ_2600 PF00266 Aminotransferase class-V BCQ_2601 PF08359 YsiA-like protein, C-terminal region BCQ_2601 PF00440 Bacterial regulatory proteins, tetR family BCQ_2602 PF13344 Haloacid dehalogenase-like hydrolase BCQ_2602 PF00293 NUDIX domain BCQ_2607 PF01590 GAF domain BCQ_2607 PF00158 Sigma-54 interaction domain BCQ_2607 PF02954 Bacterial regulatory protein, Fis family BCQ_2610 PF13302 Acetyltransferase (GNAT) domain BCQ_2611 PF08220 DeoR-like helix-turn-helix domain BCQ_2611 PF00455 DeoR C terminal sensor domain BCQ_2614 PF07992 Pyridine nucleotide-disulphide oxidoreductase BCQ_2614 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BCQ_2615 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BCQ_2615 PF02817 e3 binding domain BCQ_2615 PF00364 Biotin-requiring enzyme BCQ_2616 PF02780 Transketolase, C-terminal domain BCQ_2616 PF02779 Transketolase, pyrimidine binding domain BCQ_2617 PF00676 Dehydrogenase E1 component BCQ_2619 PF00106 short chain dehydrogenase BCQ_2620 PF04229 GrpB protein BCQ_2620 PF13673 Acetyltransferase (GNAT) domain BCQ_2623 PF00293 NUDIX domain BCQ_2628 PF00528 Binding-protein-dependent transport system inner membrane component BCQ_2629 PF00571 CBS domain BCQ_2629 PF00005 ABC transporter BCQ_2630 PF04069 Substrate binding domain of ABC-type glycine betaine transport system BCQ_2631 PF00574 Clp protease BCQ_2634 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) BCQ_2635 PF13673 Acetyltransferase (GNAT) domain BCQ_2636 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase BCQ_2637 PF03781 Sulfatase-modifying factor enzyme 1 BCQ_2639 PF10990 Protein of unknown function (DUF2809) BCQ_2640 PF08241 Methyltransferase domain BCQ_2641 PF04237 YjbR BCQ_2643 PF13567 Domain of unknown function (DUF4131) BCQ_2643 PF00753 Metallo-beta-lactamase superfamily BCQ_2643 PF03772 Competence protein BCQ_2651 PF13538 UvrD-like helicase C-terminal domain BCQ_2654 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like BCQ_2655 PF00271 Helicase conserved C-terminal domain BCQ_2655 PF00570 HRDC domain BCQ_2655 PF16124 RecQ zinc-binding BCQ_2655 PF00270 DEAD/DEAH box helicase BCQ_2655 PF09382 RQC domain BCQ_2659 PF01510 N-acetylmuramoyl-L-alanine amidase BCQ_2659 PF12123 N-acetylmuramoyl-l-alanine amidase BCQ_2664 PF02833 DHHA2 domain BCQ_2664 PF01368 DHH family BCQ_2665 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading BCQ_2665 PF18416 N-acetylglucosamine binding protein domain 2 BCQ_2668 PF02627 Carboxymuconolactone decarboxylase family BCQ_2669 PF01235 Sodium:alanine symporter family BCQ_2670 PF00171 Aldehyde dehydrogenase family BCQ_2671 PF00701 Dihydrodipicolinate synthetase family BCQ_2672 PF05544 Proline racemase BCQ_2673 PF05544 Proline racemase BCQ_2674 PF01266 FAD dependent oxidoreductase BCQ_2675 PF02954 Bacterial regulatory protein, Fis family BCQ_2675 PF00158 Sigma-54 interaction domain BCQ_2675 PF13188 PAS domain BCQ_2676 PF07992 Pyridine nucleotide-disulphide oxidoreductase BCQ_2676 PF04324 BFD-like [2Fe-2S] binding domain BCQ_2678 PF04324 BFD-like [2Fe-2S] binding domain BCQ_2678 PF07992 Pyridine nucleotide-disulphide oxidoreductase BCQ_2681 PF08876 Domain of unknown function (DUF1836) BCQ_2682 PF09335 SNARE associated Golgi protein BCQ_2683 PF04914 DltD protein BCQ_2684 PF03352 Methyladenine glycosylase BCQ_2684 PF00117 Glutamine amidotransferase class-I BCQ_2684 PF13302 Acetyltransferase (GNAT) domain BCQ_2684 PF13673 Acetyltransferase (GNAT) domain BCQ_2684 PF00958 GMP synthase C terminal domain BCQ_2685 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BCQ_2686 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain BCQ_2686 PF00877 NlpC/P60 family BCQ_2687 PF13378 Enolase C-terminal domain-like BCQ_2687 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BCQ_2690 PF01965 DJ-1/PfpI family BCQ_2691 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BCQ_2696 PF02129 X-Pro dipeptidyl-peptidase (S15 family) BCQ_2696 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain BCQ_2697 PF00512 His Kinase A (phospho-acceptor) domain BCQ_2697 PF13426 PAS domain BCQ_2697 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCQ_2697 PF00672 HAMP domain BCQ_2698 PF00072 Response regulator receiver domain BCQ_2698 PF00486 Transcriptional regulatory protein, C terminal BCQ_2702 PF13419 Haloacid dehalogenase-like hydrolase BCQ_2703 PF01048 Phosphorylase superfamily BCQ_2704 PF03808 Glycosyl transferase WecB/TagA/CpsF family BCQ_2705 PF01432 Peptidase family M3 BCQ_2705 PF08439 Oligopeptidase F BCQ_2706 PF02645 Uncharacterised protein, DegV family COG1307 BCQ_2707 PF07552 Spore Coat Protein X and V domain BCQ_2715 PF07690 Major Facilitator Superfamily BCQ_2717 PF04519 Polymer-forming cytoskeletal BCQ_2718 PF13171 Protein of unknown function (DUF4004) BCQ_2719 PF12793 Sugar transport-related sRNA regulator N-term BCQ_2719 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BCQ_2720 PF07690 Major Facilitator Superfamily BCQ_2725 PF04226 Transglycosylase associated protein BCQ_2726 PF01156 Inosine-uridine preferring nucleoside hydrolase BCQ_2728 PF08241 Methyltransferase domain BCQ_2734 PF00155 Aminotransferase class I and II BCQ_2735 PF07977 FabA-like domain BCQ_2736 PF03630 Fumble BCQ_2747 PF01594 AI-2E family transporter BCQ_2750 PF00296 Luciferase-like monooxygenase BCQ_2751 PF00528 Binding-protein-dependent transport system inner membrane component BCQ_2752 PF09084 NMT1/THI5 like BCQ_2753 PF00005 ABC transporter BCQ_2757 PF13344 Haloacid dehalogenase-like hydrolase BCQ_2757 PF00293 NUDIX domain BCQ_2761 PF02522 Aminoglycoside 3-N-acetyltransferase BCQ_2765 PF13536 Putative multidrug resistance efflux transporter BCQ_2766 PF12867 DinB superfamily BCQ_2771 PF01522 Polysaccharide deacetylase BCQ_2773 PF03611 PTS system sugar-specific permease component BCQ_2775 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BCQ_2776 PF03741 Integral membrane protein TerC family BCQ_2777 PF00884 Sulfatase BCQ_2778 PF12848 ABC transporter BCQ_2778 PF00005 ABC transporter BCQ_2780 PF03176 MMPL family BCQ_2781 PF00440 Bacterial regulatory proteins, tetR family BCQ_2781 PF16295 Tetracyclin repressor-like, C-terminal domain BCQ_2783 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BCQ_2784 PF02153 Prephenate dehydrogenase BCQ_2784 PF01842 ACT domain BCQ_2785 PF00155 Aminotransferase class I and II BCQ_2786 PF01264 Chorismate synthase BCQ_2787 PF01817 Chorismate mutase type II BCQ_2787 PF00793 DAHP synthetase I family BCQ_2790 PF01636 Phosphotransferase enzyme family BCQ_2792 PF06725 3D domain BCQ_2792 PF01476 LysM domain BCQ_2795 PF06039 Malate:quinone oxidoreductase (Mqo) BCQ_2796 PF13407 Periplasmic binding protein domain BCQ_2797 PF02653 Branched-chain amino acid transport system / permease component BCQ_2798 PF02653 Branched-chain amino acid transport system / permease component BCQ_2799 PF00005 ABC transporter BCQ_2800 PF00325 Bacterial regulatory proteins, crp family BCQ_2800 PF04198 Putative sugar-binding domain BCQ_2801 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BCQ_2801 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BCQ_2803 PF01791 DeoC/LacD family aldolase BCQ_2805 PF03992 Antibiotic biosynthesis monooxygenase BCQ_2808 PF07662 Na+ dependent nucleoside transporter C-terminus BCQ_2808 PF01773 Na+ dependent nucleoside transporter N-terminus BCQ_2809 PF00171 Aldehyde dehydrogenase family BCQ_2810 PF00696 Amino acid kinase family BCQ_2810 PF01472 PUA domain BCQ_2811 PF14748 Pyrroline-5-carboxylate reductase dimerisation BCQ_2811 PF03807 NADP oxidoreductase coenzyme F420-dependent BCQ_2812 PF01546 Peptidase family M20/M25/M40 BCQ_2813 PF09339 IclR helix-turn-helix domain BCQ_2813 PF01614 Bacterial transcriptional regulator BCQ_2814 PF00324 Amino acid permease BCQ_2815 PF01139 tRNA-splicing ligase RtcB BCQ_2816 PF00487 Fatty acid desaturase BCQ_2817 PF05547 Immune inhibitor A peptidase M6 BCQ_2818 PF00245 Alkaline phosphatase BCQ_2819 PF11188 Protein of unknown function (DUF2975) BCQ_2820 PF13443 Cro/C1-type HTH DNA-binding domain BCQ_2823 PF10086 YhfC intramembrane metalloprotease BCQ_2825 PF00072 Response regulator receiver domain BCQ_2825 PF04397 LytTr DNA-binding domain BCQ_2827 PF13302 Acetyltransferase (GNAT) domain BCQ_2828 PF12681 Glyoxalase-like domain BCQ_2831 PF07726 ATPase family associated with various cellular activities (AAA) BCQ_2831 PF17863 AAA lid domain BCQ_2834 PF07690 Major Facilitator Superfamily BCQ_2835 PF00202 Aminotransferase class-III BCQ_2836 PF06628 Catalase-related immune-responsive BCQ_2836 PF00199 Catalase BCQ_2837 PF00528 Binding-protein-dependent transport system inner membrane component BCQ_2838 PF00005 ABC transporter BCQ_2841 PF01047 MarR family BCQ_2842 PF13382 Adenine deaminase C-terminal domain BCQ_2842 PF01979 Amidohydrolase family BCQ_2843 PF00144 Beta-lactamase BCQ_2847 PF07726 ATPase family associated with various cellular activities (AAA) BCQ_2847 PF17863 AAA lid domain BCQ_2849 PF00881 Nitroreductase family BCQ_2850 PF01047 MarR family BCQ_2851 PF03764 Elongation factor G, domain IV BCQ_2851 PF00009 Elongation factor Tu GTP binding domain BCQ_2851 PF14492 Elongation Factor G, domain II BCQ_2851 PF00679 Elongation factor G C-terminus BCQ_2853 PF00293 NUDIX domain BCQ_2856 PF00005 ABC transporter BCQ_2857 PF00392 Bacterial regulatory proteins, gntR family BCQ_2859 PF00005 ABC transporter BCQ_2863 PF00005 ABC transporter BCQ_2868 PF12833 Helix-turn-helix domain BCQ_2869 PF00583 Acetyltransferase (GNAT) family BCQ_2872 PF00892 EamA-like transporter family BCQ_2873 PF00392 Bacterial regulatory proteins, gntR family BCQ_2873 PF00155 Aminotransferase class I and II BCQ_2874 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 BCQ_2875 PF13031 Protein of unknown function (DUF3892) BCQ_2876 PF00672 HAMP domain BCQ_2876 PF00512 His Kinase A (phospho-acceptor) domain BCQ_2877 PF00486 Transcriptional regulatory protein, C terminal BCQ_2877 PF00072 Response regulator receiver domain BCQ_2878 PF00561 alpha/beta hydrolase fold BCQ_2884 PF01925 Sulfite exporter TauE/SafE BCQ_2886 PF00324 Amino acid permease BCQ_2888 PF08713 DNA alkylation repair enzyme BCQ_2889 PF13411 MerR HTH family regulatory protein BCQ_2889 PF06445 GyrI-like small molecule binding domain BCQ_2890 PF02796 Helix-turn-helix domain of resolvase BCQ_2890 PF00665 Integrase core domain BCQ_2891 PF01695 IstB-like ATP binding protein BCQ_2895 PF00293 NUDIX domain BCQ_2897 PF10502 Signal peptidase, peptidase S26 BCQ_2900 PF02146 Sir2 family BCQ_2901 PF01470 Pyroglutamyl peptidase BCQ_2904 PF03746 LamB/YcsF family BCQ_2905 PF02626 Carboxyltransferase domain, subdomain A and B BCQ_2906 PF02682 Carboxyltransferase domain, subdomain C and D BCQ_2907 PF01614 Bacterial transcriptional regulator BCQ_2907 PF09339 IclR helix-turn-helix domain BCQ_2908 PF10502 Signal peptidase, peptidase S26 BCQ_2909 PF03932 CutC family BCQ_2910 PF07454 Stage II sporulation protein P (SpoIIP) BCQ_2914 PF08028 Acyl-CoA dehydrogenase, C-terminal domain BCQ_2914 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BCQ_2914 PF02770 Acyl-CoA dehydrogenase, middle domain BCQ_2919 PF00395 S-layer homology domain BCQ_2919 PF01520 N-acetylmuramoyl-L-alanine amidase BCQ_2922 PF10903 Protein of unknown function (DUF2691) BCQ_2923 PF02915 Rubrerythrin BCQ_2925 PF00440 Bacterial regulatory proteins, tetR family BCQ_2926 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain BCQ_2926 PF00391 PEP-utilising enzyme, mobile domain BCQ_2928 PF00753 Metallo-beta-lactamase superfamily BCQ_2931 PF07875 Coat F domain BCQ_2933 PF08892 YqcI/YcgG family BCQ_2934 PF01810 LysE type translocator BCQ_2935 PF00324 Amino acid permease BCQ_2937 PF00269 Small, acid-soluble spore proteins, alpha/beta type BCQ_2938 PF10710 Protein of unknown function (DUF2512) BCQ_2939 PF11553 Protein of unknown function (DUF3231) BCQ_2940 PF00269 Small, acid-soluble spore proteins, alpha/beta type BCQ_2941 PF08240 Alcohol dehydrogenase GroES-like domain BCQ_2941 PF00107 Zinc-binding dehydrogenase BCQ_2941 PF13823 Alcohol dehydrogenase GroES-associated BCQ_2943 PF10415 Fumarase C C-terminus BCQ_2943 PF00206 Lyase BCQ_2944 PF00710 Asparaginase, N-terminal BCQ_2944 PF17763 Glutaminase/Asparaginase C-terminal domain BCQ_2945 PF01381 Helix-turn-helix BCQ_2946 PF13333 Integrase core domain BCQ_2946 PF00665 Integrase core domain BCQ_2946 PF13276 HTH-like domain BCQ_2947 PF01541 GIY-YIG catalytic domain BCQ_2947 PF08459 UvrC Helix-hairpin-helix N-terminal BCQ_2947 PF02151 UvrB/uvrC motif BCQ_2947 PF12826 Helix-hairpin-helix motif BCQ_2948 PF13520 Amino acid permease BCQ_2949 PF03807 NADP oxidoreductase coenzyme F420-dependent BCQ_2949 PF14748 Pyrroline-5-carboxylate reductase dimerisation BCQ_2950 PF05504 Spore germination B3/ GerAC like, C-terminal BCQ_2951 PF03845 Spore germination protein BCQ_2952 PF03323 Bacillus/Clostridium GerA spore germination protein BCQ_2954 PF00072 Response regulator receiver domain BCQ_2954 PF08664 YcbB domain BCQ_2955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCQ_2956 PF04960 Glutaminase BCQ_2957 PF01235 Sodium:alanine symporter family BCQ_2960 PF00144 Beta-lactamase BCQ_2961 PF00355 Rieske [2Fe-2S] domain BCQ_2961 PF01266 FAD dependent oxidoreductase BCQ_2962 PF01554 MatE BCQ_2963 PF13520 Amino acid permease BCQ_2964 PF17936 Bacterial Ig domain BCQ_2964 PF02872 5'-nucleotidase, C-terminal domain BCQ_2964 PF00149 Calcineurin-like phosphoesterase BCQ_2965 PF00199 Catalase BCQ_2965 PF06628 Catalase-related immune-responsive BCQ_2966 PF01544 CorA-like Mg2+ transporter protein BCQ_2969 PF11181 Heat induced stress protein YflT BCQ_2974 PF03073 TspO/MBR family BCQ_2975 PF00875 DNA photolyase BCQ_2975 PF03441 FAD binding domain of DNA photolyase BCQ_2979 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) BCQ_2980 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BCQ_2980 PF00361 Proton-conducting membrane transporter BCQ_2981 PF10057 Uncharacterized conserved protein (DUF2294) BCQ_2983 PF05504 Spore germination B3/ GerAC like, C-terminal BCQ_2984 PF03323 Bacillus/Clostridium GerA spore germination protein BCQ_2985 PF00583 Acetyltransferase (GNAT) family BCQ_2986 PF01040 UbiA prenyltransferase family BCQ_2987 PF12996 DUF based on E. rectale Gene description (DUF3880) BCQ_2988 PF00005 ABC transporter BCQ_2989 PF02687 FtsX-like permease family BCQ_2991 PF08769 Sporulation initiation factor Spo0A C terminal BCQ_2991 PF00072 Response regulator receiver domain BCQ_2996 PF00596 Class II Aldolase and Adducin N-terminal domain BCQ_2997 PF02952 L-fucose isomerase, C-terminal domain BCQ_2997 PF07882 L-fucose isomerase, second N-terminal domain BCQ_2997 PF07881 L-fucose isomerase, first N-terminal domain BCQ_2998 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BCQ_2998 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BCQ_2999 PF00596 Class II Aldolase and Adducin N-terminal domain BCQ_3001 PF02653 Branched-chain amino acid transport system / permease component BCQ_3002 PF00005 ABC transporter BCQ_3003 PF05025 RbsD / FucU transport protein family BCQ_3004 PF00356 Bacterial regulatory proteins, lacI family BCQ_3007 PF01451 Low molecular weight phosphotyrosine protein phosphatase BCQ_3008 PF01758 Sodium Bile acid symporter family BCQ_3009 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BCQ_3010 PF01022 Bacterial regulatory protein, arsR family BCQ_3012 PF01872 RibD C-terminal domain BCQ_3015 PF00005 ABC transporter BCQ_3020 PF07993 Male sterility protein BCQ_3020 PF00550 Phosphopantetheine attachment site BCQ_3021 PF00440 Bacterial regulatory proteins, tetR family BCQ_3021 PF18665 Tetracyclin repressor-like, C-terminal domain BCQ_3022 PF07690 Major Facilitator Superfamily BCQ_3023 PF00440 Bacterial regulatory proteins, tetR family BCQ_3024 PF00106 short chain dehydrogenase BCQ_3025 PF01037 Lrp/AsnC ligand binding domain BCQ_3028 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BCQ_3033 PF12802 MarR family BCQ_3034 PF00175 Oxidoreductase NAD-binding domain BCQ_3034 PF00667 FAD binding domain BCQ_3034 PF00258 Flavodoxin BCQ_3034 PF00067 Cytochrome P450 BCQ_3035 PF07690 Major Facilitator Superfamily BCQ_3037 PF09962 Uncharacterized conserved protein (DUF2196) BCQ_3043 PF00291 Pyridoxal-phosphate dependent enzyme BCQ_3045 PF02073 Thermophilic metalloprotease (M29) BCQ_3048 PF13411 MerR HTH family regulatory protein BCQ_3049 PF04072 Leucine carboxyl methyltransferase BCQ_3052 PF00005 ABC transporter BCQ_3053 PF02687 FtsX-like permease family BCQ_3057 PF00512 His Kinase A (phospho-acceptor) domain BCQ_3057 PF00672 HAMP domain BCQ_3057 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCQ_3058 PF00486 Transcriptional regulatory protein, C terminal BCQ_3058 PF00072 Response regulator receiver domain BCQ_3060 PF01047 MarR family BCQ_3061 PF00583 Acetyltransferase (GNAT) family BCQ_3062 PF04299 Putative FMN-binding domain BCQ_3063 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BCQ_3063 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BCQ_3064 PF07690 Major Facilitator Superfamily BCQ_3065 PF02589 LUD domain BCQ_3066 PF02589 LUD domain BCQ_3066 PF13183 4Fe-4S dicluster domain BCQ_3066 PF11870 Domain of unknown function (DUF3390) BCQ_3067 PF02754 Cysteine-rich domain BCQ_3068 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BCQ_3068 PF03466 LysR substrate binding domain BCQ_3071 PF02016 LD-carboxypeptidase N-terminal domain BCQ_3071 PF17676 LD-carboxypeptidase C-terminal domain BCQ_3074 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BCQ_3074 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BCQ_3074 PF01842 ACT domain BCQ_3075 PF00266 Aminotransferase class-V BCQ_3077 PF07883 Cupin domain BCQ_3078 PF01497 Periplasmic binding protein BCQ_3078 PF12833 Helix-turn-helix domain BCQ_3080 PF01804 Penicillin amidase BCQ_3083 PF01471 Putative peptidoglycan binding domain BCQ_3083 PF01510 N-acetylmuramoyl-L-alanine amidase BCQ_3083 PF01476 LysM domain BCQ_3091 PF14044 NETI protein BCQ_3092 PF07690 Major Facilitator Superfamily BCQ_3094 PF12697 Alpha/beta hydrolase family BCQ_3095 PF01047 MarR family BCQ_3096 PF07690 Major Facilitator Superfamily BCQ_3099 PF12679 ABC-2 family transporter protein BCQ_3100 PF13732 Domain of unknown function (DUF4162) BCQ_3100 PF00005 ABC transporter BCQ_3101 PF13396 Phospholipase_D-nuclease N-terminal BCQ_3103 PF00893 Small Multidrug Resistance protein BCQ_3104 PF00440 Bacterial regulatory proteins, tetR family BCQ_3105 PF17440 Thiol-activated cytolysin beta sandwich domain BCQ_3105 PF01289 Thiol-activated cytolysin BCQ_3106 PF02667 Short chain fatty acid transporter BCQ_3108 PF02525 Flavodoxin-like fold BCQ_3112 PF14256 YwiC-like protein BCQ_3114 PF00005 ABC transporter BCQ_3115 PF02361 Cobalt transport protein BCQ_3118 PF03737 Aldolase/RraA BCQ_3119 PF03606 C4-dicarboxylate anaerobic carrier BCQ_3123 PF13411 MerR HTH family regulatory protein BCQ_3126 PF01381 Helix-turn-helix BCQ_3127 PF00293 NUDIX domain BCQ_3129 PF04073 Aminoacyl-tRNA editing domain BCQ_3130 PF03129 Anticodon binding domain BCQ_3130 PF13393 Histidyl-tRNA synthetase BCQ_3134 PF01638 HxlR-like helix-turn-helix BCQ_3135 PF00881 Nitroreductase family BCQ_3137 PF00391 PEP-utilising enzyme, mobile domain BCQ_3137 PF02887 Pyruvate kinase, alpha/beta domain BCQ_3137 PF00224 Pyruvate kinase, barrel domain BCQ_3141 PF00005 ABC transporter BCQ_3146 PF13419 Haloacid dehalogenase-like hydrolase BCQ_3150 PF00293 NUDIX domain BCQ_3150 PF13344 Haloacid dehalogenase-like hydrolase BCQ_3151 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BCQ_3152 PF00480 ROK family BCQ_3153 PF12464 Maltose acetyltransferase BCQ_3153 PF14602 Hexapeptide repeat of succinyl-transferase BCQ_3154 PF00579 tRNA synthetases class I (W and Y) BCQ_3155 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain BCQ_3155 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase BCQ_3155 PF13288 DXP reductoisomerase C-terminal domain BCQ_3156 PF01594 AI-2E family transporter BCQ_3161 PF08003 Protein of unknown function (DUF1698) BCQ_3163 PF07690 Major Facilitator Superfamily BCQ_3166 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BCQ_3168 PF01595 Cyclin M transmembrane N-terminal domain BCQ_3168 PF03471 Transporter associated domain BCQ_3168 PF00571 CBS domain BCQ_3169 PF13411 MerR HTH family regulatory protein BCQ_3171 PF00483 Nucleotidyl transferase BCQ_3172 PF16363 GDP-mannose 4,6 dehydratase BCQ_3173 PF08421 Putative zinc binding domain BCQ_3173 PF08484 C-methyltransferase C-terminal domain BCQ_3174 PF01370 NAD dependent epimerase/dehydratase family BCQ_3177 PF00892 EamA-like transporter family BCQ_3178 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BCQ_3178 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BCQ_3180 PF00805 Pentapeptide repeats (8 copies) BCQ_3181 PF06906 Protein of unknown function (DUF1272) BCQ_3182 PF10282 Lactonase, 7-bladed beta-propeller BCQ_3183 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BCQ_3183 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BCQ_3184 PF02447 GntP family permease BCQ_3185 PF00923 Transaldolase/Fructose-6-phosphate aldolase BCQ_3186 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BCQ_3186 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain BCQ_3187 PF00456 Transketolase, thiamine diphosphate binding domain BCQ_3187 PF02779 Transketolase, pyrimidine binding domain BCQ_3187 PF02780 Transketolase, C-terminal domain BCQ_3188 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain BCQ_3188 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain BCQ_3190 PF00296 Luciferase-like monooxygenase BCQ_3192 PF08240 Alcohol dehydrogenase GroES-like domain BCQ_3192 PF16197 Ketoacyl-synthetase C-terminal extension BCQ_3192 PF00109 Beta-ketoacyl synthase, N-terminal domain BCQ_3192 PF02801 Beta-ketoacyl synthase, C-terminal domain BCQ_3192 PF08659 KR domain BCQ_3192 PF14765 Polyketide synthase dehydratase BCQ_3192 PF00698 Acyl transferase domain BCQ_3192 PF00107 Zinc-binding dehydrogenase BCQ_3192 PF00550 Phosphopantetheine attachment site BCQ_3193 PF00106 short chain dehydrogenase BCQ_3196 PF00248 Aldo/keto reductase family BCQ_3197 PF07690 Major Facilitator Superfamily BCQ_3199 PF03928 Haem-degrading BCQ_3200 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BCQ_3206 PF03960 ArsC family BCQ_3207 PF01638 HxlR-like helix-turn-helix BCQ_3208 PF00392 Bacterial regulatory proteins, gntR family BCQ_3208 PF07702 UTRA domain BCQ_3209 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BCQ_3209 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BCQ_3211 PF01638 HxlR-like helix-turn-helix BCQ_3212 PF01638 HxlR-like helix-turn-helix BCQ_3213 PF00248 Aldo/keto reductase family BCQ_3220 PF02567 Phenazine biosynthesis-like protein BCQ_3224 PF13302 Acetyltransferase (GNAT) domain BCQ_3225 PF00501 AMP-binding enzyme BCQ_3225 PF13193 AMP-binding enzyme C-terminal domain BCQ_3226 PF02525 Flavodoxin-like fold BCQ_3227 PF01638 HxlR-like helix-turn-helix BCQ_3229 PF01022 Bacterial regulatory protein, arsR family BCQ_3230 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain BCQ_3230 PF01522 Polysaccharide deacetylase BCQ_3231 PF12791 Anti-sigma factor N-terminus BCQ_3232 PF04542 Sigma-70 region 2 BCQ_3233 PF00535 Glycosyl transferase family 2 BCQ_3233 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 BCQ_3234 PF01906 Putative heavy-metal-binding BCQ_3236 PF00440 Bacterial regulatory proteins, tetR family BCQ_3240 PF01061 ABC-2 type transporter BCQ_3241 PF13732 Domain of unknown function (DUF4162) BCQ_3241 PF00005 ABC transporter BCQ_3244 PF03063 Prismane/CO dehydrogenase family BCQ_3246 PF00753 Metallo-beta-lactamase superfamily BCQ_3259 PF00753 Metallo-beta-lactamase superfamily BCQ_3260 PF00107 Zinc-binding dehydrogenase BCQ_3260 PF08240 Alcohol dehydrogenase GroES-like domain BCQ_3261 PF00324 Amino acid permease BCQ_3268 PF07690 Major Facilitator Superfamily BCQ_3272 PF02585 GlcNAc-PI de-N-acetylase BCQ_3273 PF08830 Protein of unknown function (DUF1806) BCQ_3274 PF03600 Citrate transporter BCQ_3277 PF01497 Periplasmic binding protein BCQ_3278 PF01032 FecCD transport family BCQ_3279 PF01032 FecCD transport family BCQ_3280 PF05675 Protein of unknown function (DUF817) BCQ_3284 PF13302 Acetyltransferase (GNAT) domain BCQ_3285 PF10901 Protein of unknown function (DUF2690) BCQ_3287 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BCQ_3287 PF03466 LysR substrate binding domain BCQ_3288 PF00107 Zinc-binding dehydrogenase BCQ_3288 PF08240 Alcohol dehydrogenase GroES-like domain BCQ_3289 PF05175 Methyltransferase small domain BCQ_3289 PF17827 PrmC N-terminal domain BCQ_3292 PF00488 MutS domain V BCQ_3292 PF01713 Smr domain BCQ_3293 PF00797 N-acetyltransferase BCQ_3294 PF08439 Oligopeptidase F BCQ_3294 PF01432 Peptidase family M3 BCQ_3295 PF00144 Beta-lactamase BCQ_3297 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BCQ_3297 PF03466 LysR substrate binding domain BCQ_3302 PF01022 Bacterial regulatory protein, arsR family BCQ_3303 PF08240 Alcohol dehydrogenase GroES-like domain BCQ_3303 PF00107 Zinc-binding dehydrogenase BCQ_3304 PF02696 Uncharacterized ACR, YdiU/UPF0061 family BCQ_3308 PF04299 Putative FMN-binding domain BCQ_3309 PF04229 GrpB protein BCQ_3310 PF01758 Sodium Bile acid symporter family BCQ_3311 PF01565 FAD binding domain BCQ_3311 PF02913 FAD linked oxidases, C-terminal domain BCQ_3314 PF01526 Tn3 transposase DDE domain BCQ_3314 PF13700 Domain of unknown function (DUF4158) BCQ_3315 PF01526 Tn3 transposase DDE domain BCQ_3315 PF13700 Domain of unknown function (DUF4158) BCQ_3316 PF08453 Peptidase family M9 N-terminal BCQ_3316 PF01752 Collagenase BCQ_3316 PF18496 Collagenase G catalytic helper subdomain BCQ_3317 PF02308 MgtC family BCQ_3320 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BCQ_3321 PF00497 Bacterial extracellular solute-binding proteins, family 3 BCQ_3322 PF00005 ABC transporter BCQ_3323 PF00528 Binding-protein-dependent transport system inner membrane component BCQ_3324 PF04294 VanW like protein BCQ_3326 PF13039 Protein of unknown function (DUF3900) BCQ_3326 PF13037 Domain of unknown function (DUF3898) BCQ_3330 PF00313 'Cold-shock' DNA-binding domain BCQ_3332 PF00258 Flavodoxin BCQ_3337 PF00293 NUDIX domain BCQ_3339 PF00132 Bacterial transferase hexapeptide (six repeats) BCQ_3341 PF00106 short chain dehydrogenase BCQ_3343 PF00206 Lyase BCQ_3343 PF14698 Argininosuccinate lyase C-terminal BCQ_3345 PF01156 Inosine-uridine preferring nucleoside hydrolase BCQ_3346 PF00474 Sodium:solute symporter family BCQ_3348 PF00171 Aldehyde dehydrogenase family BCQ_3350 PF14151 YfhD-like protein BCQ_3351 PF13249 Squalene-hopene cyclase N-terminal domain BCQ_3351 PF13243 Squalene-hopene cyclase C-terminal domain BCQ_3352 PF02681 Divergent PAP2 family BCQ_3353 PF00892 EamA-like transporter family BCQ_3354 PF06961 Protein of unknown function (DUF1294) BCQ_3357 PF10609 NUBPL iron-transfer P-loop NTPase BCQ_3359 PF02391 MoaE protein BCQ_3360 PF03454 MoeA C-terminal region (domain IV) BCQ_3360 PF00994 Probable molybdopterin binding domain BCQ_3360 PF03453 MoeA N-terminal region (domain I and II) BCQ_3361 PF00899 ThiF family BCQ_3362 PF01226 Formate/nitrite transporter BCQ_3363 PF06463 Molybdenum Cofactor Synthesis C BCQ_3363 PF04055 Radical SAM superfamily BCQ_3364 PF02634 FdhD/NarQ family BCQ_3365 PF10057 Uncharacterized conserved protein (DUF2294) BCQ_3366 PF07849 Protein of unknown function (DUF1641) BCQ_3367 PF01568 Molydopterin dinucleotide binding domain BCQ_3367 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BCQ_3367 PF00037 4Fe-4S binding domain BCQ_3367 PF00384 Molybdopterin oxidoreductase BCQ_3367 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BCQ_3368 PF03323 Bacillus/Clostridium GerA spore germination protein BCQ_3377 PF08241 Methyltransferase domain BCQ_3378 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BCQ_3379 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BCQ_3380 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BCQ_3381 PF00375 Sodium:dicarboxylate symporter family BCQ_3382 PF03816 Cell envelope-related transcriptional attenuator domain BCQ_3384 PF04542 Sigma-70 region 2 BCQ_3384 PF08281 Sigma-70, region 4 BCQ_3385 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BCQ_3387 PF00005 ABC transporter BCQ_3387 PF13732 Domain of unknown function (DUF4162) BCQ_3389 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BCQ_3389 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BCQ_3390 PF00521 DNA gyrase/topoisomerase IV, subunit A BCQ_3390 PF03989 DNA gyrase C-terminal domain, beta-propeller BCQ_3391 PF00986 DNA gyrase B subunit, carboxyl terminus BCQ_3391 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCQ_3391 PF01751 Toprim domain BCQ_3391 PF00204 DNA gyrase B BCQ_3392 PF13380 CoA binding domain BCQ_3393 PF13180 PDZ domain BCQ_3394 PF00072 Response regulator receiver domain BCQ_3394 PF00486 Transcriptional regulatory protein, C terminal BCQ_3395 PF04055 Radical SAM superfamily BCQ_3396 PF13597 Anaerobic ribonucleoside-triphosphate reductase BCQ_3396 PF03477 ATP cone domain BCQ_3398 PF02660 Glycerol-3-phosphate acyltransferase BCQ_3399 PF01521 Iron-sulphur cluster biosynthesis BCQ_3400 PF03061 Thioesterase superfamily BCQ_3401 PF00704 Glycosyl hydrolases family 18 BCQ_3401 PF01476 LysM domain BCQ_3403 PF08177 Small acid-soluble spore protein N family BCQ_3404 PF13040 Fur-regulated basic protein B BCQ_3405 PF02811 PHP domain BCQ_3405 PF11490 DNA polymerase III polC-type N-terminus II BCQ_3405 PF07733 Bacterial DNA polymerase III alpha NTPase domain BCQ_3405 PF00929 Exonuclease BCQ_3405 PF01336 OB-fold nucleic acid binding domain BCQ_3405 PF14579 Helix-hairpin-helix motif BCQ_3405 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BCQ_3406 PF00578 AhpC/TSA family BCQ_3407 PF00664 ABC transporter transmembrane region BCQ_3407 PF00005 ABC transporter BCQ_3408 PF00694 Aconitase C-terminal domain BCQ_3408 PF00330 Aconitase family (aconitate hydratase) BCQ_3410 PF01522 Polysaccharide deacetylase BCQ_3412 PF08179 Small acid-soluble spore protein P family BCQ_3414 PF07690 Major Facilitator Superfamily BCQ_3414 PF07690 Major Facilitator Superfamily BCQ_3415 PF09346 SMI1 / KNR4 family (SUKH-1) BCQ_3419 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BCQ_3419 PF02272 DHHA1 domain BCQ_3419 PF01411 tRNA synthetases class II (A) BCQ_3420 PF13344 Haloacid dehalogenase-like hydrolase BCQ_3420 PF00293 NUDIX domain BCQ_3423 PF18801 response regulator aspartate phosphatase H, N terminal BCQ_3424 PF02803 Thiolase, C-terminal domain BCQ_3424 PF00108 Thiolase, N-terminal domain BCQ_3425 PF13193 AMP-binding enzyme C-terminal domain BCQ_3425 PF00501 AMP-binding enzyme BCQ_3426 PF02632 BioY family BCQ_3427 PF00501 AMP-binding enzyme BCQ_3427 PF13193 AMP-binding enzyme C-terminal domain BCQ_3429 PF00005 ABC transporter BCQ_3430 PF01381 Helix-turn-helix BCQ_3433 PF05532 CsbD-like BCQ_3439 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BCQ_3439 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BCQ_3441 PF13426 PAS domain BCQ_3441 PF13188 PAS domain BCQ_3441 PF00989 PAS fold BCQ_3441 PF00512 His Kinase A (phospho-acceptor) domain BCQ_3441 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCQ_3442 PF01738 Dienelactone hydrolase family BCQ_3443 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BCQ_3444 PF00474 Sodium:solute symporter family BCQ_3446 PF01645 Conserved region in glutamate synthase BCQ_3447 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BCQ_3448 PF02559 CarD-like/TRCF domain BCQ_3449 PF00491 Arginase family BCQ_3450 PF01979 Amidohydrolase family BCQ_3451 PF01175 Urocanase Rossmann-like domain BCQ_3451 PF17392 Urocanase C-terminal domain BCQ_3451 PF17391 Urocanase N-terminal domain BCQ_3452 PF00221 Aromatic amino acid lyase BCQ_3453 PF09021 HutP BCQ_3454 PF01209 ubiE/COQ5 methyltransferase family BCQ_3458 PF11084 Protein of unknown function (DUF2621) BCQ_3462 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) BCQ_3464 PF07301 Protein of unknown function (DUF1453) BCQ_3465 PF02683 Cytochrome C biogenesis protein transmembrane region BCQ_3469 PF00005 ABC transporter BCQ_3471 PF03466 LysR substrate binding domain BCQ_3471 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BCQ_3472 PF03788 LrgA family BCQ_3473 PF04172 LrgB-like family BCQ_3474 PF00293 NUDIX domain BCQ_3474 PF13344 Haloacid dehalogenase-like hydrolase BCQ_3476 PF01925 Sulfite exporter TauE/SafE BCQ_3478 PF01471 Putative peptidoglycan binding domain BCQ_3478 PF01510 N-acetylmuramoyl-L-alanine amidase BCQ_3482 PF00664 ABC transporter transmembrane region BCQ_3482 PF00005 ABC transporter BCQ_3483 PF00664 ABC transporter transmembrane region BCQ_3483 PF00005 ABC transporter BCQ_3484 PF03672 Uncharacterised protein family (UPF0154) BCQ_3485 PF10747 Sporulation inhibitor of replication protein SirA BCQ_3486 PF02780 Transketolase, C-terminal domain BCQ_3486 PF00456 Transketolase, thiamine diphosphate binding domain BCQ_3486 PF02779 Transketolase, pyrimidine binding domain BCQ_3487 PF00528 Binding-protein-dependent transport system inner membrane component BCQ_3488 PF00528 Binding-protein-dependent transport system inner membrane component BCQ_3489 PF00005 ABC transporter BCQ_3490 PF00497 Bacterial extracellular solute-binding proteins, family 3 BCQ_3491 PF02872 5'-nucleotidase, C-terminal domain BCQ_3491 PF00149 Calcineurin-like phosphoesterase BCQ_3492 PF05979 Bacterial protein of unknown function (DUF896) BCQ_3493 PF00239 Resolvase, N terminal domain BCQ_3494 PF01726 LexA DNA binding domain BCQ_3494 PF00717 Peptidase S24-like BCQ_3497 PF03551 Transcriptional regulator PadR-like family BCQ_3498 PF03951 Glutamine synthetase, beta-Grasp domain BCQ_3498 PF00120 Glutamine synthetase, catalytic domain BCQ_3499 PF13411 MerR HTH family regulatory protein BCQ_3500 PF06838 Methionine gamma-lyase BCQ_3501 PF16360 GTP-binding GTPase Middle Region BCQ_3501 PF01926 50S ribosome-binding GTPase BCQ_3501 PF13167 GTP-binding GTPase N-terminal BCQ_3502 PF03458 UPF0126 domain BCQ_3504 PF00004 ATPase family associated with various cellular activities (AAA) BCQ_3504 PF17866 AAA lid domain BCQ_3508 PF17209 Hfq protein BCQ_3511 PF06725 3D domain BCQ_3511 PF01476 LysM domain BCQ_3512 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BCQ_3512 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BCQ_3513 PF00294 pfkB family carbohydrate kinase BCQ_3514 PF00455 DeoR C terminal sensor domain BCQ_3514 PF08220 DeoR-like helix-turn-helix domain BCQ_3515 PF00465 Iron-containing alcohol dehydrogenase BCQ_3516 PF04238 Protein of unknown function (DUF420) BCQ_3519 PF00324 Amino acid permease BCQ_3520 PF00704 Glycosyl hydrolases family 18 BCQ_3520 PF00041 Fibronectin type III domain BCQ_3521 PF00149 Calcineurin-like phosphoesterase BCQ_3521 PF10518 TAT (twin-arginine translocation) pathway signal sequence BCQ_3522 PF01226 Formate/nitrite transporter BCQ_3523 PF00216 Bacterial DNA-binding protein BCQ_3525 PF00403 Heavy-metal-associated domain BCQ_3526 PF00403 Heavy-metal-associated domain BCQ_3527 PF02583 Metal-sensitive transcriptional repressor BCQ_3529 PF00756 Putative esterase BCQ_3530 PF00005 ABC transporter BCQ_3531 PF01032 FecCD transport family BCQ_3532 PF01032 FecCD transport family BCQ_3533 PF01497 Periplasmic binding protein BCQ_3534 PF02805 Metal binding domain of Ada BCQ_3534 PF12833 Helix-turn-helix domain BCQ_3535 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BCQ_3535 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain BCQ_3536 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain BCQ_3536 PF00730 HhH-GPD superfamily base excision DNA repair protein BCQ_3537 PF01546 Peptidase family M20/M25/M40 BCQ_3537 PF07687 Peptidase dimerisation domain BCQ_3540 PF03707 Bacterial signalling protein N terminal repeat BCQ_3540 PF00990 Diguanylate cyclase, GGDEF domain BCQ_3540 PF00563 EAL domain BCQ_3542 PF10787 Uncharacterised protein from bacillus cereus group BCQ_3543 PF03788 LrgA family BCQ_3544 PF00392 Bacterial regulatory proteins, gntR family BCQ_3544 PF00155 Aminotransferase class I and II BCQ_3547 PF00388 Phosphatidylinositol-specific phospholipase C, X domain BCQ_3548 PF07486 Cell Wall Hydrolase BCQ_3550 PF00884 Sulfatase BCQ_3551 PF00350 Dynamin family BCQ_3553 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family BCQ_3554 PF08676 MutL C terminal dimerisation domain BCQ_3554 PF01119 DNA mismatch repair protein, C-terminal domain BCQ_3555 PF05188 MutS domain II BCQ_3555 PF01624 MutS domain I BCQ_3555 PF05192 MutS domain III BCQ_3555 PF00488 MutS domain V BCQ_3555 PF05190 MutS family domain IV BCQ_3556 PF10628 Outer spore coat protein E (CotE) BCQ_3557 PF06133 Control of competence regulator ComK, YlbF/YmcA BCQ_3558 PF04055 Radical SAM superfamily BCQ_3558 PF01938 TRAM domain BCQ_3558 PF00919 Uncharacterized protein family UPF0004 BCQ_3559 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BCQ_3560 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg BCQ_3560 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase BCQ_3560 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II BCQ_3561 PF01244 Membrane dipeptidase (Peptidase family M19) BCQ_3562 PF04232 Stage V sporulation protein S (SpoVS) BCQ_3563 PF13277 YmdB-like protein BCQ_3565 PF00154 recA bacterial DNA recombination protein BCQ_3566 PF00154 recA bacterial DNA recombination protein BCQ_3567 PF18146 Damage-inducible protein CinA KH domain BCQ_3567 PF00994 Probable molybdopterin binding domain BCQ_3567 PF02464 Competence-damaged protein BCQ_3568 PF01066 CDP-alcohol phosphatidyltransferase BCQ_3569 PF13464 Domain of unknown function (DUF4115) BCQ_3570 PF11868 Protein of unknown function (DUF3388) BCQ_3571 PF11588 Protein of unknown function (DUF3243) BCQ_3573 PF00675 Insulinase (Peptidase family M16) BCQ_3573 PF05193 Peptidase M16 inactive domain BCQ_3574 PF05193 Peptidase M16 inactive domain BCQ_3579 PF00392 Bacterial regulatory proteins, gntR family BCQ_3579 PF07702 UTRA domain BCQ_3580 PF17854 FtsK alpha domain BCQ_3580 PF09397 Ftsk gamma domain BCQ_3580 PF01580 FtsK/SpoIIIE family BCQ_3581 PF14035 YlzJ-like protein BCQ_3582 PF00574 Clp protease BCQ_3583 PF00753 Metallo-beta-lactamase superfamily BCQ_3583 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain BCQ_3583 PF17770 Ribonuclease J C-terminal domain BCQ_3584 PF00701 Dihydrodipicolinate synthetase family BCQ_3585 PF13840 ACT domain BCQ_3585 PF00696 Amino acid kinase family BCQ_3586 PF02774 Semialdehyde dehydrogenase, dimerisation domain BCQ_3586 PF01118 Semialdehyde dehydrogenase, NAD binding domain BCQ_3587 PF02441 Flavoprotein BCQ_3588 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BCQ_3588 PF16924 Dipicolinate synthase subunit A N-terminal domain BCQ_3589 PF05239 PRC-barrel domain BCQ_3590 PF05193 Peptidase M16 inactive domain BCQ_3590 PF00675 Insulinase (Peptidase family M16) BCQ_3591 PF01522 Polysaccharide deacetylase BCQ_3592 PF03725 3' exoribonuclease family, domain 2 BCQ_3592 PF00575 S1 RNA binding domain BCQ_3592 PF00013 KH domain BCQ_3592 PF01138 3' exoribonuclease family, domain 1 BCQ_3592 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain BCQ_3593 PF01687 Riboflavin kinase BCQ_3593 PF06574 FAD synthetase BCQ_3594 PF01509 TruB family pseudouridylate synthase (N terminal domain) BCQ_3594 PF16198 tRNA pseudouridylate synthase B C-terminal domain BCQ_3595 PF02033 Ribosome-binding factor A BCQ_3596 PF04456 Protein of unknown function (DUF503) BCQ_3597 PF04760 Translation initiation factor IF-2, N-terminal region BCQ_3597 PF11987 Translation-initiation factor 2 BCQ_3597 PF00009 Elongation factor Tu GTP binding domain BCQ_3598 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family BCQ_3599 PF04296 Protein of unknown function (DUF448) BCQ_3600 PF13184 NusA-like KH domain BCQ_3600 PF08529 NusA N-terminal domain BCQ_3600 PF00575 S1 RNA binding domain BCQ_3601 PF02576 RimP N-terminal domain BCQ_3601 PF17384 RimP C-terminal SH3 domain BCQ_3602 PF02811 PHP domain BCQ_3602 PF14579 Helix-hairpin-helix motif BCQ_3602 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BCQ_3602 PF00929 Exonuclease BCQ_3602 PF07733 Bacterial DNA polymerase III alpha NTPase domain BCQ_3602 PF14480 DNA polymerase III polC-type N-terminus I BCQ_3602 PF11490 DNA polymerase III polC-type N-terminus II BCQ_3604 PF04073 Aminoacyl-tRNA editing domain BCQ_3604 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BCQ_3604 PF03129 Anticodon binding domain BCQ_3605 PF02163 Peptidase family M50 BCQ_3605 PF17820 PDZ domain BCQ_3606 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain BCQ_3606 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase BCQ_3606 PF13288 DXP reductoisomerase C-terminal domain BCQ_3608 PF01255 Putative undecaprenyl diphosphate synthase BCQ_3609 PF01765 Ribosome recycling factor BCQ_3610 PF00696 Amino acid kinase family BCQ_3611 PF00889 Elongation factor TS BCQ_3612 PF00318 Ribosomal protein S2 BCQ_3613 PF06018 CodY GAF-like domain BCQ_3613 PF08222 CodY helix-turn-helix domain BCQ_3614 PF07724 AAA domain (Cdc48 subfamily) BCQ_3614 PF10431 C-terminal, D2-small domain, of ClpB protein BCQ_3614 PF00004 ATPase family associated with various cellular activities (AAA) BCQ_3615 PF00227 Proteasome subunit BCQ_3616 PF00589 Phage integrase family BCQ_3616 PF02899 Phage integrase, N-terminal SAM-like domain BCQ_3617 PF01134 Glucose inhibited division protein A BCQ_3618 PF01396 Topoisomerase DNA binding C4 zinc finger BCQ_3618 PF01751 Toprim domain BCQ_3618 PF01131 DNA topoisomerase BCQ_3619 PF02481 DNA recombination-mediator protein A BCQ_3620 PF02629 CoA binding domain BCQ_3620 PF00549 CoA-ligase BCQ_3621 PF08442 ATP-grasp domain BCQ_3621 PF00549 CoA-ligase BCQ_3622 PF01351 Ribonuclease HII BCQ_3623 PF01926 50S ribosome-binding GTPase BCQ_3624 PF10502 Signal peptidase, peptidase S26 BCQ_3625 PF01245 Ribosomal protein L19 BCQ_3626 PF01746 tRNA (Guanine-1)-methyltransferase BCQ_3627 PF01782 RimM N-terminal domain BCQ_3627 PF05239 PRC-barrel domain BCQ_3629 PF00886 Ribosomal protein S16 BCQ_3630 PF02978 Signal peptide binding domain BCQ_3630 PF00448 SRP54-type protein, GTPase domain BCQ_3630 PF02881 SRP54-type protein, helical bundle domain BCQ_3631 PF04297 Putative helix-turn-helix protein, YlxM / p13 like BCQ_3632 PF02881 SRP54-type protein, helical bundle domain BCQ_3632 PF00448 SRP54-type protein, GTPase domain BCQ_3633 PF02463 RecF/RecN/SMC N terminal domain BCQ_3633 PF06470 SMC proteins Flexible Hinge Domain BCQ_3634 PF00035 Double-stranded RNA binding motif BCQ_3634 PF14622 Ribonuclease-III-like BCQ_3635 PF00550 Phosphopantetheine attachment site BCQ_3637 PF00698 Acyl transferase domain BCQ_3638 PF02504 Fatty acid synthesis protein BCQ_3639 PF03061 Thioesterase superfamily BCQ_3640 PF17191 RecG wedge domain BCQ_3640 PF00270 DEAD/DEAH box helicase BCQ_3640 PF00271 Helicase conserved C-terminal domain BCQ_3641 PF02734 DAK2 domain BCQ_3641 PF13684 Dihydroxyacetone kinase family BCQ_3642 PF03780 Asp23 family, cell envelope-related function BCQ_3643 PF00830 Ribosomal L28 family BCQ_3644 PF04263 Thiamin pyrophosphokinase, catalytic domain BCQ_3644 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain BCQ_3645 PF00834 Ribulose-phosphate 3 epimerase family BCQ_3646 PF03193 RsgA GTPase BCQ_3646 PF16745 RsgA N-terminal domain BCQ_3647 PF00069 Protein kinase domain BCQ_3647 PF03793 PASTA domain BCQ_3649 PF04055 Radical SAM superfamily BCQ_3650 PF01189 16S rRNA methyltransferase RsmB/F BCQ_3650 PF01029 NusB family BCQ_3651 PF00551 Formyl transferase BCQ_3651 PF02911 Formyl transferase, C-terminal domain BCQ_3652 PF01327 Polypeptide deformylase BCQ_3653 PF18319 PriA DNA helicase Cys-rich region (CRR) domain BCQ_3653 PF00271 Helicase conserved C-terminal domain BCQ_3653 PF18074 Primosomal protein N C-terminal domain BCQ_3653 PF17764 3′ DNA-binding domain (3′BD) BCQ_3653 PF04851 Type III restriction enzyme, res subunit BCQ_3654 PF04127 DNA / pantothenate metabolism flavoprotein BCQ_3654 PF02441 Flavoprotein BCQ_3655 PF01192 RNA polymerase Rpb6 BCQ_3656 PF00625 Guanylate kinase BCQ_3657 PF04025 Domain of unknown function (DUF370) BCQ_3658 PF03755 YicC-like family, N-terminal region BCQ_3658 PF08340 Domain of unknown function (DUF1732) BCQ_3659 PF00689 Cation transporting ATPase, C-terminus BCQ_3659 PF00690 Cation transporter/ATPase, N-terminus BCQ_3661 PF00557 Metallopeptidase family M24 BCQ_3661 PF01321 Creatinase/Prolidase N-terminal domain BCQ_3668 PF00156 Phosphoribosyl transferase domain BCQ_3669 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family BCQ_3670 PF01180 Dihydroorotate dehydrogenase BCQ_3671 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B BCQ_3671 PF00175 Oxidoreductase NAD-binding domain BCQ_3672 PF02142 MGS-like domain BCQ_3672 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BCQ_3672 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BCQ_3673 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain BCQ_3673 PF00117 Glutamine amidotransferase class-I BCQ_3674 PF01979 Amidohydrolase family BCQ_3675 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BCQ_3675 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BCQ_3676 PF00860 Permease family BCQ_3677 PF00156 Phosphoribosyl transferase domain BCQ_3678 PF01479 S4 domain BCQ_3678 PF00849 RNA pseudouridylate synthase BCQ_3679 PF01252 Signal peptidase (SPase) II BCQ_3681 PF06827 Zinc finger found in FPG and IleRS BCQ_3681 PF08264 Anticodon-binding domain of tRNA BCQ_3681 PF00133 tRNA synthetases class I (I, L, M and V) BCQ_3682 PF05103 DivIVA protein BCQ_3683 PF01479 S4 domain BCQ_3683 PF17774 Putative RNA-binding domain in YlmH BCQ_3684 PF02325 YGGT family BCQ_3685 PF04472 Cell division protein SepF BCQ_3686 PF01168 Alanine racemase, N-terminal domain BCQ_3688 PF05239 PRC-barrel domain BCQ_3689 PF04542 Sigma-70 region 2 BCQ_3689 PF04539 Sigma-70 region 3 BCQ_3689 PF04545 Sigma-70, region 4 BCQ_3690 PF04542 Sigma-70 region 2 BCQ_3690 PF04545 Sigma-70, region 4 BCQ_3691 PF03419 Sporulation factor SpoIIGA BCQ_3692 PF12327 FtsZ family, C-terminal domain BCQ_3692 PF00091 Tubulin/FtsZ family, GTPase domain BCQ_3693 PF02491 SHS2 domain inserted in FTSA BCQ_3694 PF08478 POTRA domain, FtsQ-type BCQ_3694 PF03799 Cell division protein FtsQ BCQ_3695 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain BCQ_3695 PF01565 FAD binding domain BCQ_3696 PF04101 Glycosyltransferase family 28 C-terminal domain BCQ_3696 PF03033 Glycosyltransferase family 28 N-terminal domain BCQ_3697 PF01098 Cell cycle protein BCQ_3698 PF08245 Mur ligase middle domain BCQ_3698 PF02875 Mur ligase family, glutamate ligase domain BCQ_3699 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 BCQ_3699 PF00953 Glycosyl transferase family 4 BCQ_3700 PF08245 Mur ligase middle domain BCQ_3700 PF01225 Mur ligase family, catalytic domain BCQ_3700 PF02875 Mur ligase family, glutamate ligase domain BCQ_3701 PF03717 Penicillin-binding Protein dimerisation domain BCQ_3701 PF03793 PASTA domain BCQ_3701 PF00905 Penicillin binding protein transpeptidase domain BCQ_3703 PF04977 Septum formation initiator BCQ_3704 PF01795 MraW methylase family BCQ_3705 PF10079 Bacillithiol biosynthesis BshC BCQ_3706 PF02558 Ketopantoate reductase PanE/ApbA BCQ_3706 PF08546 Ketopantoate reductase PanE/ApbA C terminal BCQ_3708 PF00583 Acetyltransferase (GNAT) family BCQ_3710 PF02620 Large ribosomal RNA subunit accumulation protein YceD BCQ_3711 PF05636 HIGH Nucleotidyl Transferase BCQ_3712 PF05362 Lon protease (S16) C-terminal proteolytic domain BCQ_3712 PF13180 PDZ domain BCQ_3713 PF01734 Patatin-like phospholipase BCQ_3714 PF07670 Nucleoside recognition BCQ_3716 PF01467 Cytidylyltransferase-like BCQ_3719 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) BCQ_3721 PF06133 Control of competence regulator ComK, YlbF/YmcA BCQ_3722 PF00300 Histidine phosphatase superfamily (branch 1) BCQ_3723 PF14003 YlbE-like protein BCQ_3724 PF14071 Putative coat protein BCQ_3725 PF14504 CAP-associated N-terminal BCQ_3725 PF00188 Cysteine-rich secretory protein family BCQ_3726 PF08868 YugN-like family BCQ_3727 PF00795 Carbon-nitrogen hydrolase BCQ_3728 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) BCQ_3729 PF03626 Prokaryotic Cytochrome C oxidase subunit IV BCQ_3730 PF00510 Cytochrome c oxidase subunit III BCQ_3731 PF00115 Cytochrome C and Quinol oxidase polypeptide I BCQ_3732 PF00116 Cytochrome C oxidase subunit II, periplasmic domain BCQ_3732 PF00034 Cytochrome c BCQ_3732 PF02790 Cytochrome C oxidase subunit II, transmembrane domain BCQ_3733 PF01040 UbiA prenyltransferase family BCQ_3734 PF02628 Cytochrome oxidase assembly protein BCQ_3735 PF02785 Biotin carboxylase C-terminal domain BCQ_3735 PF00289 Biotin carboxylase, N-terminal domain BCQ_3735 PF00682 HMGL-like BCQ_3735 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BCQ_3735 PF02436 Conserved carboxylase domain BCQ_3735 PF00364 Biotin-requiring enzyme BCQ_3736 PF01098 Cell cycle protein BCQ_3737 PF07408 Protein of unknown function (DUF1507) BCQ_3739 PF02562 PhoH-like protein BCQ_3739 PF13638 PIN domain BCQ_3741 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) BCQ_3743 PF14036 YlaH-like protein BCQ_3746 PF00459 Inositol monophosphatase family BCQ_3747 PF00459 Inositol monophosphatase family BCQ_3749 PF06335 Protein of unknown function (DUF1054) BCQ_3750 PF05256 Uncharacterised protein family (UPF0223) BCQ_3751 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain BCQ_3751 PF01276 Orn/Lys/Arg decarboxylase, major domain BCQ_3758 PF07992 Pyridine nucleotide-disulphide oxidoreductase BCQ_3758 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BCQ_3759 PF00364 Biotin-requiring enzyme BCQ_3759 PF02817 e3 binding domain BCQ_3759 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BCQ_3760 PF02779 Transketolase, pyrimidine binding domain BCQ_3760 PF02780 Transketolase, C-terminal domain BCQ_3761 PF00676 Dehydrogenase E1 component BCQ_3763 PF01327 Polypeptide deformylase BCQ_3766 PF17770 Ribonuclease J C-terminal domain BCQ_3766 PF00753 Metallo-beta-lactamase superfamily BCQ_3766 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain BCQ_3767 PF02080 TrkA-C domain BCQ_3767 PF02254 TrkA-N domain BCQ_3769 PF01546 Peptidase family M20/M25/M40 BCQ_3769 PF07687 Peptidase dimerisation domain BCQ_3770 PF14602 Hexapeptide repeat of succinyl-transferase BCQ_3770 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal BCQ_3770 PF00132 Bacterial transferase hexapeptide (six repeats) BCQ_3771 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BCQ_3771 PF03466 LysR substrate binding domain BCQ_3774 PF04308 Ribonuclease H-like BCQ_3777 PF10388 EAL-domain associated signalling protein domain BCQ_3777 PF00563 EAL domain BCQ_3779 PF10518 TAT (twin-arginine translocation) pathway signal sequence BCQ_3779 PF00149 Calcineurin-like phosphoesterase BCQ_3780 PF13089 Polyphosphate kinase N-terminal domain BCQ_3780 PF17941 Polyphosphate kinase C-terminal domain 1 BCQ_3780 PF13090 Polyphosphate kinase C-terminal domain 2 BCQ_3780 PF02503 Polyphosphate kinase middle domain BCQ_3781 PF02503 Polyphosphate kinase middle domain BCQ_3781 PF17941 Polyphosphate kinase C-terminal domain 1 BCQ_3781 PF13089 Polyphosphate kinase N-terminal domain BCQ_3781 PF13090 Polyphosphate kinase C-terminal domain 2 BCQ_3782 PF02541 Ppx/GppA phosphatase family BCQ_3783 PF14177 YkyB-like protein BCQ_3788 PF07690 Major Facilitator Superfamily BCQ_3791 PF01717 Cobalamin-independent synthase, Catalytic domain BCQ_3791 PF08267 Cobalamin-independent synthase, N-terminal domain BCQ_3793 PF14040 Deoxyribonuclease NucA/NucB BCQ_3796 PF00512 His Kinase A (phospho-acceptor) domain BCQ_3796 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCQ_3798 PF00155 Aminotransferase class I and II BCQ_3799 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BCQ_3799 PF00356 Bacterial regulatory proteins, lacI family BCQ_3800 PF00528 Binding-protein-dependent transport system inner membrane component BCQ_3801 PF00528 Binding-protein-dependent transport system inner membrane component BCQ_3802 PF13416 Bacterial extracellular solute-binding protein BCQ_3803 PF00128 Alpha amylase, catalytic domain BCQ_3803 PF02903 Alpha amylase, N-terminal ig-like domain BCQ_3803 PF16657 Maltogenic Amylase, C-terminal domain BCQ_3804 PF16657 Maltogenic Amylase, C-terminal domain BCQ_3804 PF00128 Alpha amylase, catalytic domain BCQ_3805 PF00005 ABC transporter BCQ_3805 PF03459 TOBE domain BCQ_3805 PF17912 MalK OB fold domain BCQ_3812 PF02463 RecF/RecN/SMC N terminal domain BCQ_3813 PF00108 Thiolase, N-terminal domain BCQ_3813 PF02803 Thiolase, C-terminal domain BCQ_3814 PF00293 NUDIX domain BCQ_3819 PF03551 Transcriptional regulator PadR-like family BCQ_3823 PF01636 Phosphotransferase enzyme family BCQ_3824 PF00155 Aminotransferase class I and II BCQ_3825 PF00795 Carbon-nitrogen hydrolase BCQ_3826 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain BCQ_3826 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain BCQ_3828 PF00596 Class II Aldolase and Adducin N-terminal domain BCQ_3829 PF03079 ARD/ARD' family BCQ_3832 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BCQ_3832 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BCQ_3833 PF00144 Beta-lactamase BCQ_3834 PF00990 Diguanylate cyclase, GGDEF domain BCQ_3835 PF00881 Nitroreductase family BCQ_3838 PF00391 PEP-utilising enzyme, mobile domain BCQ_3838 PF05524 PEP-utilising enzyme, N-terminal BCQ_3838 PF02896 PEP-utilising enzyme, TIM barrel domain BCQ_3839 PF00381 PTS HPr component phosphorylation site BCQ_3840 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BCQ_3840 PF02378 Phosphotransferase system, EIIC BCQ_3840 PF00367 phosphotransferase system, EIIB BCQ_3841 PF00874 PRD domain BCQ_3841 PF03123 CAT RNA binding domain BCQ_3844 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase BCQ_3845 PF01979 Amidohydrolase family BCQ_3847 PF04079 Segregation and condensation complex subunit ScpB BCQ_3848 PF02616 Segregation and condensation protein ScpA BCQ_3850 PF03745 Domain of unknown function (DUF309) BCQ_3851 PF00583 Acetyltransferase (GNAT) family BCQ_3852 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BCQ_3853 PF06207 Protein of unknown function (DUF1002) BCQ_3855 PF03323 Bacillus/Clostridium GerA spore germination protein BCQ_3856 PF14097 Stage V sporulation protein AE1 BCQ_3857 PF03862 SpoVAC/SpoVAEB sporulation membrane protein BCQ_3858 PF07451 Stage V sporulation protein AD (SpoVAD) BCQ_3859 PF03862 SpoVAC/SpoVAEB sporulation membrane protein BCQ_3860 PF13782 Stage V sporulation protein AB BCQ_3861 PF12164 Stage V sporulation protein AA BCQ_3862 PF00209 Sodium:neurotransmitter symporter family BCQ_3863 PF04545 Sigma-70, region 4 BCQ_3863 PF04539 Sigma-70 region 3 BCQ_3863 PF04542 Sigma-70 region 2 BCQ_3864 PF13581 Histidine kinase-like ATPase domain BCQ_3865 PF01740 STAS domain BCQ_3866 PF07943 Penicillin-binding protein 5, C-terminal domain BCQ_3866 PF00768 D-alanyl-D-alanine carboxypeptidase BCQ_3867 PF00392 Bacterial regulatory proteins, gntR family BCQ_3868 PF00005 ABC transporter BCQ_3872 PF01047 MarR family BCQ_3874 PF00860 Permease family BCQ_3875 PF01544 CorA-like Mg2+ transporter protein BCQ_3876 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain BCQ_3876 PF00591 Glycosyl transferase family, a/b domain BCQ_3876 PF02885 Glycosyl transferase family, helical bundle domain BCQ_3877 PF01048 Phosphorylase superfamily BCQ_3878 PF01676 Metalloenzyme superfamily BCQ_3880 PF00589 Phage integrase family BCQ_3880 PF02899 Phage integrase, N-terminal SAM-like domain BCQ_3881 PF14004 Protein of unknown function (DUF4227) BCQ_3882 PF01475 Ferric uptake regulator family BCQ_3883 PF01944 Stage II sporulation protein M BCQ_3885 PF00293 NUDIX domain BCQ_3886 PF13072 Mother cell inhibitor of FtsZ BCQ_3887 PF00248 Aldo/keto reductase family BCQ_3888 PF00248 Aldo/keto reductase family BCQ_3889 PF13673 Acetyltransferase (GNAT) domain BCQ_3889 PF04229 GrpB protein BCQ_3891 PF02872 5'-nucleotidase, C-terminal domain BCQ_3891 PF00746 LPXTG cell wall anchor motif BCQ_3891 PF00149 Calcineurin-like phosphoesterase BCQ_3891 PF00565 Staphylococcal nuclease homologue BCQ_3893 PF12146 Serine aminopeptidase, S33 BCQ_3894 PF03553 Na+/H+ antiporter family BCQ_3894 PF13726 Na+-H+ antiporter family BCQ_3895 PF00356 Bacterial regulatory proteins, lacI family BCQ_3896 PF00583 Acetyltransferase (GNAT) family BCQ_3897 PF12146 Serine aminopeptidase, S33 BCQ_3898 PF10827 Protein of unknown function (DUF2552) BCQ_3899 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BCQ_3899 PF01872 RibD C-terminal domain BCQ_3900 PF00677 Lumazine binding domain BCQ_3901 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase BCQ_3901 PF00925 GTP cyclohydrolase II BCQ_3902 PF00885 6,7-dimethyl-8-ribityllumazine synthase BCQ_3904 PF04055 Radical SAM superfamily BCQ_3904 PF06968 Biotin and Thiamin Synthesis associated domain BCQ_3905 PF13847 Methyltransferase domain BCQ_3906 PF08241 Methyltransferase domain BCQ_3906 PF12697 Alpha/beta hydrolase family BCQ_3907 PF00155 Aminotransferase class I and II BCQ_3909 PF00202 Aminotransferase class-III BCQ_3913 PF02872 5'-nucleotidase, C-terminal domain BCQ_3913 PF00149 Calcineurin-like phosphoesterase BCQ_3915 PF01037 Lrp/AsnC ligand binding domain BCQ_3915 PF13404 AsnC-type helix-turn-helix domain BCQ_3918 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BCQ_3918 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BCQ_3919 PF00202 Aminotransferase class-III BCQ_3920 PF00696 Amino acid kinase family BCQ_3921 PF01960 ArgJ family BCQ_3922 PF02774 Semialdehyde dehydrogenase, dimerisation domain BCQ_3922 PF01118 Semialdehyde dehydrogenase, NAD binding domain BCQ_3924 PF00106 short chain dehydrogenase BCQ_3925 PF00753 Metallo-beta-lactamase superfamily BCQ_3926 PF14748 Pyrroline-5-carboxylate reductase dimerisation BCQ_3926 PF03807 NADP oxidoreductase coenzyme F420-dependent BCQ_3927 PF03313 Serine dehydratase alpha chain BCQ_3928 PF01842 ACT domain BCQ_3928 PF03315 Serine dehydratase beta chain BCQ_3930 PF12706 Beta-lactamase superfamily domain BCQ_3930 PF00753 Metallo-beta-lactamase superfamily BCQ_3933 PF11799 impB/mucB/samB family C-terminal domain BCQ_3933 PF11798 IMS family HHH motif BCQ_3933 PF00817 impB/mucB/samB family BCQ_3934 PF01546 Peptidase family M20/M25/M40 BCQ_3934 PF07687 Peptidase dimerisation domain BCQ_3935 PF13302 Acetyltransferase (GNAT) domain BCQ_3938 PF03734 L,D-transpeptidase catalytic domain BCQ_3939 PF11728 Putative aromatic acid exporter C-terminal domain BCQ_3939 PF06081 Aromatic acid exporter family member 1 BCQ_3940 PF00005 ABC transporter BCQ_3941 PF00528 Binding-protein-dependent transport system inner membrane component BCQ_3942 PF00497 Bacterial extracellular solute-binding proteins, family 3 BCQ_3943 PF06491 Disulphide isomerase BCQ_3944 PF09297 NADH pyrophosphatase zinc ribbon domain BCQ_3944 PF00293 NUDIX domain BCQ_3945 PF04239 Protein of unknown function (DUF421) BCQ_3946 PF01098 Cell cycle protein BCQ_3947 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BCQ_3947 PF00364 Biotin-requiring enzyme BCQ_3947 PF02817 e3 binding domain BCQ_3948 PF02779 Transketolase, pyrimidine binding domain BCQ_3948 PF02780 Transketolase, C-terminal domain BCQ_3949 PF00676 Dehydrogenase E1 component BCQ_3950 PF07992 Pyridine nucleotide-disulphide oxidoreductase BCQ_3950 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BCQ_3951 PF00871 Acetokinase family BCQ_3952 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BCQ_3952 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BCQ_3953 PF01515 Phosphate acetyl/butaryl transferase BCQ_3954 PF02954 Bacterial regulatory protein, Fis family BCQ_3954 PF00989 PAS fold BCQ_3954 PF00158 Sigma-54 interaction domain BCQ_3956 PF03009 Glycerophosphoryl diester phosphodiesterase family BCQ_3957 PF14174 YycC-like protein BCQ_3958 PF08769 Sporulation initiation factor Spo0A C terminal BCQ_3958 PF00072 Response regulator receiver domain BCQ_3959 PF17820 PDZ domain BCQ_3959 PF05580 SpoIVB peptidase S55 BCQ_3960 PF13476 AAA domain BCQ_3961 PF01316 Arginine repressor, DNA binding domain BCQ_3961 PF02863 Arginine repressor, C-terminal domain BCQ_3962 PF01479 S4 domain BCQ_3962 PF01728 FtsJ-like methyltransferase BCQ_3963 PF02779 Transketolase, pyrimidine binding domain BCQ_3963 PF02780 Transketolase, C-terminal domain BCQ_3963 PF13292 1-deoxy-D-xylulose-5-phosphate synthase BCQ_3964 PF00348 Polyprenyl synthetase BCQ_3965 PF02609 Exonuclease VII small subunit BCQ_3966 PF13742 OB-fold nucleic acid binding domain BCQ_3966 PF02601 Exonuclease VII, large subunit BCQ_3967 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain BCQ_3967 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain BCQ_3968 PF01029 NusB family BCQ_3969 PF03780 Asp23 family, cell envelope-related function BCQ_3970 PF00289 Biotin carboxylase, N-terminal domain BCQ_3970 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BCQ_3970 PF02785 Biotin carboxylase C-terminal domain BCQ_3971 PF00364 Biotin-requiring enzyme BCQ_3973 PF12685 SpoIIIAH-like protein BCQ_3975 PF09581 Stage III sporulation protein AF (Spore_III_AF) BCQ_3976 PF09546 Stage III sporulation protein AE (spore_III_AE) BCQ_3977 PF06686 Stage III sporulation protein AC/AD protein family BCQ_3978 PF06686 Stage III sporulation protein AC/AD protein family BCQ_3979 PF09548 Stage III sporulation protein AB (spore_III_AB) BCQ_3984 PF01132 Elongation factor P (EF-P) OB domain BCQ_3984 PF08207 Elongation factor P (EF-P) KOW-like domain BCQ_3984 PF09285 Elongation factor P, C-terminal BCQ_3985 PF00557 Metallopeptidase family M24 BCQ_3985 PF01321 Creatinase/Prolidase N-terminal domain BCQ_3986 PF01220 Dehydroquinase class II BCQ_3987 PF11085 Conserved membrane protein YqhR BCQ_3988 PF07136 Protein of unknown function (DUF1385) BCQ_3991 PF01325 Iron dependent repressor, N-terminal DNA binding domain BCQ_3991 PF02742 Iron dependent repressor, metal binding and dimerisation domain BCQ_3995 PF03099 Biotin/lipoate A/B protein ligase family BCQ_3996 PF00581 Rhodanese-like domain BCQ_3997 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BCQ_3997 PF00356 Bacterial regulatory proteins, lacI family BCQ_3999 PF00893 Small Multidrug Resistance protein BCQ_4000 PF00893 Small Multidrug Resistance protein BCQ_4006 PF00005 ABC transporter BCQ_4007 PF00392 Bacterial regulatory proteins, gntR family BCQ_4010 PF02347 Glycine cleavage system P-protein BCQ_4011 PF02347 Glycine cleavage system P-protein BCQ_4012 PF08669 Glycine cleavage T-protein C-terminal barrel domain BCQ_4012 PF01571 Aminomethyltransferase folate-binding domain BCQ_4013 PF00176 SNF2 family N-terminal domain BCQ_4013 PF00271 Helicase conserved C-terminal domain BCQ_4014 PF11079 Bacterial protein YqhG of unknown function BCQ_4018 PF14038 YqzE-like protein BCQ_4019 PF01202 Shikimate kinase BCQ_4024 PF07963 Prokaryotic N-terminal methylation motif BCQ_4026 PF00482 Type II secretion system (T2SS), protein F BCQ_4027 PF00437 Type II/IV secretion system protein BCQ_4029 PF11117 Protein of unknown function (DUF2626) BCQ_4030 PF00375 Sodium:dicarboxylate symporter family BCQ_4037 PF04101 Glycosyltransferase family 28 C-terminal domain BCQ_4037 PF03033 Glycosyltransferase family 28 N-terminal domain BCQ_4038 PF02965 Vitamin B12 dependent methionine synthase, activation domain BCQ_4038 PF02574 Homocysteine S-methyltransferase BCQ_4038 PF02310 B12 binding domain BCQ_4038 PF02607 B12 binding domain BCQ_4038 PF00809 Pterin binding enzyme BCQ_4039 PF02219 Methylenetetrahydrofolate reductase BCQ_4039 PF02574 Homocysteine S-methyltransferase BCQ_4041 PF01053 Cys/Met metabolism PLP-dependent enzyme BCQ_4042 PF01053 Cys/Met metabolism PLP-dependent enzyme BCQ_4044 PF01022 Bacterial regulatory protein, arsR family BCQ_4046 PF10958 Protein of unknown function (DUF2759) BCQ_4047 PF00753 Metallo-beta-lactamase superfamily BCQ_4048 PF00480 ROK family BCQ_4049 PF06014 Bacterial protein of unknown function (DUF910) BCQ_4050 PF01812 5-formyltetrahydrofolate cyclo-ligase family BCQ_4052 PF00483 Nucleotidyl transferase BCQ_4053 PF01895 PhoU domain BCQ_4054 PF00005 ABC transporter BCQ_4055 PF00528 Binding-protein-dependent transport system inner membrane component BCQ_4056 PF00528 Binding-protein-dependent transport system inner membrane component BCQ_4057 PF12849 PBP superfamily domain BCQ_4059 PF07690 Major Facilitator Superfamily BCQ_4060 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BCQ_4060 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BCQ_4064 PF04551 GcpE protein BCQ_4065 PF01475 Ferric uptake regulator family BCQ_4066 PF00950 ABC 3 transport family BCQ_4067 PF00005 ABC transporter BCQ_4068 PF00005 ABC transporter BCQ_4069 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BCQ_4069 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BCQ_4070 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BCQ_4070 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BCQ_4071 PF11116 Protein of unknown function (DUF2624) BCQ_4072 PF01261 Xylose isomerase-like TIM barrel BCQ_4073 PF00271 Helicase conserved C-terminal domain BCQ_4073 PF00270 DEAD/DEAH box helicase BCQ_4075 PF02401 LytB protein BCQ_4076 PF01784 NIF3 (NGG1p interacting factor 3) BCQ_4077 PF04816 tRNA (adenine(22)-N(1))-methyltransferase BCQ_4078 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BCQ_4079 PF04539 Sigma-70 region 3 BCQ_4079 PF04542 Sigma-70 region 2 BCQ_4079 PF03979 Sigma-70 factor, region 1.1 BCQ_4079 PF00140 Sigma-70 factor, region 1.2 BCQ_4079 PF04545 Sigma-70, region 4 BCQ_4080 PF10410 DnaB-helicase binding domain of primase BCQ_4080 PF08275 DNA primase catalytic core, N-terminal domain BCQ_4080 PF01807 CHC2 zinc finger BCQ_4082 PF03618 Kinase/pyrophosphorylase BCQ_4083 PF08279 HTH domain BCQ_4083 PF00571 CBS domain BCQ_4084 PF02565 Recombination protein O C terminal BCQ_4084 PF11967 Recombination protein O N terminal BCQ_4086 PF01926 50S ribosome-binding GTPase BCQ_4086 PF07650 KH domain BCQ_4087 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BCQ_4088 PF01219 Prokaryotic diacylglycerol kinase BCQ_4089 PF02130 Uncharacterized protein family UPF0054 BCQ_4090 PF01966 HD domain BCQ_4090 PF07697 7TM-HD extracellular BCQ_4090 PF07698 7TM receptor with intracellular HD hydrolase BCQ_4091 PF02562 PhoH-like protein BCQ_4092 PF06898 Putative stage IV sporulation protein YqfD BCQ_4094 PF09424 Yqey-like protein BCQ_4095 PF01165 Ribosomal protein S21 BCQ_4096 PF00919 Uncharacterized protein family UPF0004 BCQ_4096 PF01938 TRAM domain BCQ_4096 PF04055 Radical SAM superfamily BCQ_4097 PF04452 RNA methyltransferase BCQ_4099 PF00684 DnaJ central domain BCQ_4099 PF01556 DnaJ C terminal domain BCQ_4099 PF00226 DnaJ domain BCQ_4100 PF00012 Hsp70 protein BCQ_4101 PF01025 GrpE BCQ_4102 PF01628 HrcA protein C terminal domain BCQ_4103 PF04055 Radical SAM superfamily BCQ_4103 PF06969 HemN C-terminal domain BCQ_4104 PF01638 HxlR-like helix-turn-helix BCQ_4105 PF06421 GTP-binding protein LepA C-terminus BCQ_4105 PF00679 Elongation factor G C-terminus BCQ_4105 PF00009 Elongation factor Tu GTP binding domain BCQ_4105 PF03144 Elongation factor Tu domain 2 BCQ_4107 PF03418 Germination protease BCQ_4108 PF01649 Ribosomal protein S20 BCQ_4109 PF06144 DNA polymerase III, delta subunit BCQ_4110 PF14141 YqzM-like protein BCQ_4111 PF00753 Metallo-beta-lactamase superfamily BCQ_4111 PF13567 Domain of unknown function (DUF4131) BCQ_4111 PF03772 Competence protein BCQ_4112 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BCQ_4113 PF10531 SLBB domain BCQ_4114 PF03807 NADP oxidoreductase coenzyme F420-dependent BCQ_4114 PF14748 Pyrroline-5-carboxylate reductase dimerisation BCQ_4115 PF13649 Methyltransferase domain BCQ_4117 PF01966 HD domain BCQ_4118 PF01467 Cytidylyltransferase-like BCQ_4119 PF01985 CRS1 / YhbY (CRM) domain BCQ_4120 PF08501 Shikimate dehydrogenase substrate binding domain BCQ_4120 PF01488 Shikimate / quinate 5-dehydrogenase BCQ_4120 PF18317 Shikimate 5'-dehydrogenase C-terminal domain BCQ_4121 PF01926 50S ribosome-binding GTPase BCQ_4124 PF02666 Phosphatidylserine decarboxylase BCQ_4125 PF04542 Sigma-70 region 2 BCQ_4125 PF04545 Sigma-70, region 4 BCQ_4127 PF16244 Domain of unknown function (DUF4901) BCQ_4128 PF00471 Ribosomal protein L33 BCQ_4129 PF04607 Region found in RelA / SpoT proteins BCQ_4131 PF00245 Alkaline phosphatase BCQ_4133 PF00583 Acetyltransferase (GNAT) family BCQ_4134 PF00561 alpha/beta hydrolase fold BCQ_4134 PF08386 TAP-like protein BCQ_4141 PF13860 FlgD Ig-like domain BCQ_4141 PF02225 PA domain BCQ_4141 PF05922 Peptidase inhibitor I9 BCQ_4141 PF00082 Subtilase family BCQ_4142 PF00351 Biopterin-dependent aromatic amino acid hydroxylase BCQ_4144 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BCQ_4145 PF07681 DoxX BCQ_4151 PF00005 ABC transporter BCQ_4152 PF01032 FecCD transport family BCQ_4153 PF01497 Periplasmic binding protein BCQ_4155 PF00171 Aldehyde dehydrogenase family BCQ_4155 PF00465 Iron-containing alcohol dehydrogenase BCQ_4156 PF01053 Cys/Met metabolism PLP-dependent enzyme BCQ_4157 PF00291 Pyridoxal-phosphate dependent enzyme BCQ_4158 PF01048 Phosphorylase superfamily BCQ_4159 PF08241 Methyltransferase domain BCQ_4162 PF00905 Penicillin binding protein transpeptidase domain BCQ_4162 PF03717 Penicillin-binding Protein dimerisation domain BCQ_4163 PF03449 Transcription elongation factor, N-terminal BCQ_4163 PF01272 Transcription elongation factor, GreA/GreB, C-term BCQ_4164 PF00485 Phosphoribulokinase / Uridine kinase family BCQ_4168 PF02618 YceG-like family BCQ_4169 PF06949 Protein of unknown function (DUF1292) BCQ_4170 PF03652 Holliday junction resolvase BCQ_4171 PF06135 IreB regulatory phosphoprotein BCQ_4172 PF01411 tRNA synthetases class II (A) BCQ_4172 PF02272 DHHA1 domain BCQ_4172 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BCQ_4174 PF01594 AI-2E family transporter BCQ_4178 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain BCQ_4178 PF14490 Helix-hairpin-helix containing domain BCQ_4178 PF13538 UvrD-like helicase C-terminal domain BCQ_4181 PF00266 Aminotransferase class-V BCQ_4182 PF02082 Transcriptional regulator BCQ_4183 PF05496 Holliday junction DNA helicase RuvB P-loop domain BCQ_4183 PF16193 AAA C-terminal domain BCQ_4183 PF12002 MgsA AAA+ ATPase C terminal BCQ_4184 PF16193 AAA C-terminal domain BCQ_4184 PF12002 MgsA AAA+ ATPase C terminal BCQ_4184 PF05496 Holliday junction DNA helicase RuvB P-loop domain BCQ_4186 PF00899 ThiF family BCQ_4187 PF01336 OB-fold nucleic acid binding domain BCQ_4187 PF00152 tRNA synthetases class II (D, K and N) BCQ_4187 PF02938 GAD domain BCQ_4188 PF13393 Histidyl-tRNA synthetase BCQ_4188 PF03129 Anticodon binding domain BCQ_4192 PF02580 D-Tyr-tRNA(Tyr) deacylase BCQ_4193 PF02824 TGS domain BCQ_4193 PF04607 Region found in RelA / SpoT proteins BCQ_4193 PF13291 ACT domain BCQ_4194 PF00156 Phosphoribosyl transferase domain BCQ_4195 PF10141 Single-strand DNA-specific exonuclease, C terminal domain BCQ_4195 PF17768 RecJ OB domain BCQ_4195 PF02272 DHHA1 domain BCQ_4195 PF01368 DHH family BCQ_4196 PF01545 Cation efflux family BCQ_4196 PF16916 Dimerisation domain of Zinc Transporter BCQ_4197 PF02355 Protein export membrane protein BCQ_4197 PF07549 SecD/SecF GG Motif BCQ_4198 PF13797 Post-transcriptional regulator BCQ_4199 PF14667 Polysaccharide biosynthesis C-terminal domain BCQ_4199 PF01943 Polysaccharide biosynthesis protein BCQ_4200 PF04239 Protein of unknown function (DUF421) BCQ_4202 PF02699 Preprotein translocase subunit BCQ_4203 PF01702 Queuine tRNA-ribosyltransferase BCQ_4204 PF02547 Queuosine biosynthesis protein BCQ_4205 PF11146 Protein of unknown function (DUF2905) BCQ_4206 PF05496 Holliday junction DNA helicase RuvB P-loop domain BCQ_4206 PF05491 RuvB C-terminal winged helix domain BCQ_4206 PF17864 RuvB AAA lid domain BCQ_4207 PF07499 RuvA, C-terminal domain BCQ_4207 PF01330 RuvA N terminal domain BCQ_4208 PF01497 Periplasmic binding protein BCQ_4210 PF00892 EamA-like transporter family BCQ_4211 PF01022 Bacterial regulatory protein, arsR family BCQ_4215 PF01476 LysM domain BCQ_4216 PF02445 Quinolinate synthetase A protein BCQ_4217 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain BCQ_4217 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain BCQ_4218 PF02910 Fumarate reductase flavoprotein C-term BCQ_4218 PF00890 FAD binding domain BCQ_4219 PF00266 Aminotransferase class-V BCQ_4220 PF02829 3H domain BCQ_4220 PF08279 HTH domain BCQ_4221 PF03473 MOSC domain BCQ_4221 PF03475 3-alpha domain BCQ_4222 PF01842 ACT domain BCQ_4222 PF00800 Prephenate dehydratase BCQ_4223 PF02687 FtsX-like permease family BCQ_4224 PF02687 FtsX-like permease family BCQ_4225 PF00005 ABC transporter BCQ_4226 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCQ_4227 PF00072 Response regulator receiver domain BCQ_4227 PF00486 Transcriptional regulatory protein, C terminal BCQ_4228 PF09269 Domain of unknown function (DUF1967) BCQ_4228 PF01018 GTP1/OBG BCQ_4228 PF01926 50S ribosome-binding GTPase BCQ_4229 PF14682 Sporulation initiation phospho-transferase B, C-terminal BCQ_4229 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain BCQ_4230 PF01016 Ribosomal L27 protein BCQ_4231 PF04327 Cysteine protease Prp BCQ_4232 PF00829 Ribosomal prokaryotic L21 protein BCQ_4233 PF00575 S1 RNA binding domain BCQ_4233 PF10150 Ribonuclease E/G family BCQ_4234 PF02163 Peptidase family M50 BCQ_4235 PF01551 Peptidase family M23 BCQ_4236 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BCQ_4237 PF03775 Septum formation inhibitor MinC, C-terminal domain BCQ_4239 PF04085 rod shape-determining protein MreC BCQ_4241 PF04002 RadC-like JAB domain BCQ_4242 PF02545 Maf-like protein BCQ_4244 PF08245 Mur ligase middle domain BCQ_4244 PF02875 Mur ligase family, glutamate ligase domain BCQ_4245 PF08264 Anticodon-binding domain of tRNA BCQ_4245 PF10458 Valyl tRNA synthetase tRNA binding arm BCQ_4245 PF00133 tRNA synthetases class I (I, L, M and V) BCQ_4247 PF01476 LysM domain BCQ_4248 PF00202 Aminotransferase class-III BCQ_4249 PF00490 Delta-aminolevulinic acid dehydratase BCQ_4250 PF02602 Uroporphyrinogen-III synthase HemD BCQ_4251 PF03900 Porphobilinogen deaminase, C-terminal domain BCQ_4251 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain BCQ_4252 PF01578 Cytochrome C assembly protein BCQ_4253 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain BCQ_4253 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain BCQ_4253 PF01488 Shikimate / quinate 5-dehydrogenase BCQ_4254 PF01047 MarR family BCQ_4255 PF02566 OsmC-like protein BCQ_4256 PF01926 50S ribosome-binding GTPase BCQ_4257 PF00004 ATPase family associated with various cellular activities (AAA) BCQ_4257 PF05362 Lon protease (S16) C-terminal proteolytic domain BCQ_4257 PF02190 ATP-dependent protease La (LON) substrate-binding domain BCQ_4258 PF00004 ATPase family associated with various cellular activities (AAA) BCQ_4258 PF05362 Lon protease (S16) C-terminal proteolytic domain BCQ_4259 PF06689 ClpX C4-type zinc finger BCQ_4259 PF10431 C-terminal, D2-small domain, of ClpB protein BCQ_4259 PF07724 AAA domain (Cdc48 subfamily) BCQ_4260 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BCQ_4260 PF05698 Bacterial trigger factor protein (TF) C-terminus BCQ_4260 PF05697 Bacterial trigger factor protein (TF) BCQ_4264 PF08000 Bacterial PH domain BCQ_4264 PF11724 YvbH-like oligomerisation region BCQ_4274 PF02796 Helix-turn-helix domain of resolvase BCQ_4274 PF00239 Resolvase, N terminal domain BCQ_4276 PF07261 Replication initiation and membrane attachment BCQ_4281 PF02899 Phage integrase, N-terminal SAM-like domain BCQ_4281 PF00589 Phage integrase family BCQ_4284 PF12850 Calcineurin-like phosphoesterase superfamily domain BCQ_4285 PF01725 Ham1 family BCQ_4286 PF01138 3' exoribonuclease family, domain 1 BCQ_4286 PF03725 3' exoribonuclease family, domain 2 BCQ_4287 PF10646 Sporulation and spore germination BCQ_4288 PF01177 Asp/Glu/Hydantoin racemase BCQ_4289 PF07690 Major Facilitator Superfamily BCQ_4291 PF00440 Bacterial regulatory proteins, tetR family BCQ_4292 PF01965 DJ-1/PfpI family BCQ_4294 PF00196 Bacterial regulatory proteins, luxR family BCQ_4303 PF01368 DHH family BCQ_4303 PF02272 DHHA1 domain BCQ_4303 PF17768 RecJ OB domain BCQ_4303 PF10141 Single-strand DNA-specific exonuclease, C terminal domain BCQ_4311 PF00860 Permease family BCQ_4312 PF07969 Amidohydrolase family BCQ_4313 PF01381 Helix-turn-helix BCQ_4313 PF07883 Cupin domain BCQ_4314 PF13536 Putative multidrug resistance efflux transporter BCQ_4315 PF00230 Major intrinsic protein BCQ_4316 PF02082 Transcriptional regulator BCQ_4318 PF13732 Domain of unknown function (DUF4162) BCQ_4318 PF00005 ABC transporter BCQ_4319 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) BCQ_4320 PF00691 OmpA family BCQ_4320 PF13677 Membrane MotB of proton-channel complex MotA/MotB BCQ_4321 PF01618 MotA/TolQ/ExbB proton channel family BCQ_4322 PF02557 D-alanyl-D-alanine carboxypeptidase BCQ_4323 PF03061 Thioesterase superfamily BCQ_4324 PF13183 4Fe-4S dicluster domain BCQ_4324 PF13085 2Fe-2S iron-sulfur cluster binding domain BCQ_4325 PF02910 Fumarate reductase flavoprotein C-term BCQ_4325 PF00890 FAD binding domain BCQ_4326 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit BCQ_4327 PF10702 Protein of unknown function (DUF2507) BCQ_4328 PF01541 GIY-YIG catalytic domain BCQ_4328 PF02151 UvrB/uvrC motif BCQ_4328 PF08459 UvrC Helix-hairpin-helix N-terminal BCQ_4329 PF00085 Thioredoxin BCQ_4330 PF00766 Electron transfer flavoprotein FAD-binding domain BCQ_4330 PF01012 Electron transfer flavoprotein domain BCQ_4331 PF01012 Electron transfer flavoprotein domain BCQ_4332 PF00378 Enoyl-CoA hydratase/isomerase BCQ_4333 PF08359 YsiA-like protein, C-terminal region BCQ_4333 PF00440 Bacterial regulatory proteins, tetR family BCQ_4334 PF00501 AMP-binding enzyme BCQ_4334 PF13193 AMP-binding enzyme C-terminal domain BCQ_4337 PF05163 DinB family BCQ_4341 PF00005 ABC transporter BCQ_4342 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCQ_4342 PF00512 His Kinase A (phospho-acceptor) domain BCQ_4343 PF00072 Response regulator receiver domain BCQ_4343 PF00486 Transcriptional regulatory protein, C terminal BCQ_4345 PF09962 Uncharacterized conserved protein (DUF2196) BCQ_4346 PF17785 PUA-like domain BCQ_4346 PF10672 S-adenosylmethionine-dependent methyltransferase BCQ_4348 PF03992 Antibiotic biosynthesis monooxygenase BCQ_4349 PF04203 Sortase domain BCQ_4350 PF00005 ABC transporter BCQ_4351 PF01032 FecCD transport family BCQ_4352 PF01497 Periplasmic binding protein BCQ_4353 PF05031 Iron Transport-associated domain BCQ_4354 PF05031 Iron Transport-associated domain BCQ_4355 PF05525 Branched-chain amino acid transport protein BCQ_4356 PF00849 RNA pseudouridylate synthase BCQ_4356 PF01479 S4 domain BCQ_4358 PF00488 MutS domain V BCQ_4358 PF01713 Smr domain BCQ_4359 PF02811 PHP domain BCQ_4359 PF14716 Helix-hairpin-helix domain BCQ_4359 PF14791 DNA polymerase beta thumb BCQ_4360 PF02674 Colicin V production protein BCQ_4361 PF05164 Cell division protein ZapA BCQ_4362 PF11858 Domain of unknown function (DUF3378) BCQ_4362 PF01351 Ribonuclease HII BCQ_4365 PF00152 tRNA synthetases class II (D, K and N) BCQ_4365 PF01336 OB-fold nucleic acid binding domain BCQ_4366 PF01588 Putative tRNA binding domain BCQ_4366 PF03484 tRNA synthetase B5 domain BCQ_4366 PF03483 B3/4 domain BCQ_4366 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain BCQ_4366 PF03147 Ferredoxin-fold anticodon binding domain BCQ_4367 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain BCQ_4367 PF01409 tRNA synthetases class II core domain (F) BCQ_4368 PF08032 RNA 2'-O ribose methyltransferase substrate binding BCQ_4368 PF00588 SpoU rRNA Methylase family BCQ_4369 PF14098 Small, acid-soluble spore protein I BCQ_4370 PF01966 HD domain BCQ_4372 PF07690 Major Facilitator Superfamily BCQ_4374 PF00440 Bacterial regulatory proteins, tetR family BCQ_4374 PF16859 Tetracyclin repressor-like, C-terminal domain BCQ_4375 PF05343 M42 glutamyl aminopeptidase BCQ_4377 PF00453 Ribosomal protein L20 BCQ_4378 PF01632 Ribosomal protein L35 BCQ_4379 PF00707 Translation initiation factor IF-3, C-terminal domain BCQ_4379 PF05198 Translation initiation factor IF-3, N-terminal domain BCQ_4380 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BCQ_4380 PF02824 TGS domain BCQ_4380 PF03129 Anticodon binding domain BCQ_4380 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BCQ_4381 PF08812 YtxC-like family BCQ_4382 PF01695 IstB-like ATP binding protein BCQ_4382 PF07319 Primosomal protein DnaI N-terminus BCQ_4383 PF07261 Replication initiation and membrane attachment BCQ_4384 PF03477 ATP cone domain BCQ_4385 PF02675 S-adenosylmethionine decarboxylase BCQ_4386 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BCQ_4386 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BCQ_4387 PF01121 Dephospho-CoA kinase BCQ_4388 PF02659 Putative manganese efflux pump BCQ_4389 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain BCQ_4389 PF06827 Zinc finger found in FPG and IleRS BCQ_4389 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain BCQ_4390 PF00476 DNA polymerase family A BCQ_4390 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BCQ_4390 PF01367 5'-3' exonuclease, C-terminal SAM fold BCQ_4391 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCQ_4391 PF16736 Single Cache-like BCQ_4391 PF00512 His Kinase A (phospho-acceptor) domain BCQ_4391 PF00989 PAS fold BCQ_4392 PF00072 Response regulator receiver domain BCQ_4392 PF00486 Transcriptional regulatory protein, C terminal BCQ_4396 PF00056 lactate/malate dehydrogenase, NAD binding domain BCQ_4396 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BCQ_4397 PF00180 Isocitrate/isopropylmalate dehydrogenase BCQ_4398 PF00285 Citrate synthase, C-terminal domain BCQ_4399 PF04284 Protein of unknown function (DUF441) BCQ_4400 PF01594 AI-2E family transporter BCQ_4401 PF04186 FxsA cytoplasmic membrane protein BCQ_4402 PF00224 Pyruvate kinase, barrel domain BCQ_4402 PF00391 PEP-utilising enzyme, mobile domain BCQ_4402 PF02887 Pyruvate kinase, alpha/beta domain BCQ_4403 PF00365 Phosphofructokinase BCQ_4404 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit BCQ_4405 PF17848 Acetyl-coA carboxylase zinc finger domain BCQ_4405 PF01039 Carboxyl transferase domain BCQ_4406 PF00392 Bacterial regulatory proteins, gntR family BCQ_4407 PF00390 Malic enzyme, N-terminal domain BCQ_4407 PF03949 Malic enzyme, NAD binding domain BCQ_4408 PF02811 PHP domain BCQ_4408 PF07733 Bacterial DNA polymerase III alpha NTPase domain BCQ_4408 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BCQ_4408 PF14579 Helix-hairpin-helix motif BCQ_4408 PF01336 OB-fold nucleic acid binding domain BCQ_4409 PF14034 Sporulation protein YtrH BCQ_4411 PF02272 DHHA1 domain BCQ_4411 PF01368 DHH family BCQ_4412 PF14007 YtpI-like protein BCQ_4416 PF00392 Bacterial regulatory proteins, gntR family BCQ_4416 PF03061 Thioesterase superfamily BCQ_4416 PF00571 CBS domain BCQ_4416 PF07085 DRTGG domain BCQ_4419 PF01321 Creatinase/Prolidase N-terminal domain BCQ_4419 PF00557 Metallopeptidase family M24 BCQ_4420 PF11518 Protein of unknown function (DUF3221) BCQ_4424 PF08281 Sigma-70, region 4 BCQ_4424 PF04542 Sigma-70 region 2 BCQ_4426 PF12746 GNAT acetyltransferase BCQ_4427 PF07883 Cupin domain BCQ_4430 PF13276 HTH-like domain BCQ_4430 PF13333 Integrase core domain BCQ_4430 PF00665 Integrase core domain BCQ_4431 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BCQ_4431 PF05222 Alanine dehydrogenase/PNT, N-terminal domain BCQ_4433 PF00582 Universal stress protein family BCQ_4439 PF02796 Helix-turn-helix domain of resolvase BCQ_4439 PF00665 Integrase core domain BCQ_4440 PF01695 IstB-like ATP binding protein BCQ_4444 PF00206 Lyase BCQ_4444 PF14698 Argininosuccinate lyase C-terminal BCQ_4445 PF00764 Arginosuccinate synthase BCQ_4449 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BCQ_4449 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BCQ_4450 PF12787 EcsC protein family BCQ_4453 PF00871 Acetokinase family BCQ_4454 PF02384 N-6 DNA Methylase BCQ_4455 PF08534 Redoxin BCQ_4456 PF09579 Sporulation protein YtfJ (Spore_YtfJ) BCQ_4458 PF01513 ATP-NAD kinase BCQ_4459 PF07969 Amidohydrolase family BCQ_4461 PF13193 AMP-binding enzyme C-terminal domain BCQ_4461 PF00501 AMP-binding enzyme BCQ_4462 PF00269 Small, acid-soluble spore proteins, alpha/beta type BCQ_4463 PF02568 Thiamine biosynthesis protein (ThiI) BCQ_4463 PF02926 THUMP domain BCQ_4464 PF00266 Aminotransferase class-V BCQ_4465 PF06160 Septation ring formation regulator, EzrA BCQ_4466 PF03466 LysR substrate binding domain BCQ_4466 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BCQ_4467 PF00892 EamA-like transporter family BCQ_4468 PF00440 Bacterial regulatory proteins, tetR family BCQ_4469 PF13185 GAF domain BCQ_4470 PF01053 Cys/Met metabolism PLP-dependent enzyme BCQ_4471 PF00163 Ribosomal protein S4/S9 N-terminal domain BCQ_4471 PF01479 S4 domain BCQ_4474 PF00579 tRNA synthetases class I (W and Y) BCQ_4474 PF01479 S4 domain BCQ_4476 PF04542 Sigma-70 region 2 BCQ_4476 PF08281 Sigma-70, region 4 BCQ_4478 PF00501 AMP-binding enzyme BCQ_4478 PF13193 AMP-binding enzyme C-terminal domain BCQ_4479 PF00583 Acetyltransferase (GNAT) family BCQ_4480 PF00571 CBS domain BCQ_4481 PF00850 Histone deacetylase domain BCQ_4482 PF00561 alpha/beta hydrolase fold BCQ_4484 PF00072 Response regulator receiver domain BCQ_4484 PF00486 Transcriptional regulatory protein, C terminal BCQ_4485 PF13426 PAS domain BCQ_4485 PF00512 His Kinase A (phospho-acceptor) domain BCQ_4485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCQ_4485 PF00672 HAMP domain BCQ_4487 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BCQ_4488 PF01741 Large-conductance mechanosensitive channel, MscL BCQ_4492 PF00356 Bacterial regulatory proteins, lacI family BCQ_4493 PF07537 CamS sex pheromone cAM373 precursor BCQ_4494 PF11009 Protein of unknown function (DUF2847) BCQ_4497 PF02073 Thermophilic metalloprotease (M29) BCQ_4500 PF13302 Acetyltransferase (GNAT) domain BCQ_4501 PF01225 Mur ligase family, catalytic domain BCQ_4501 PF02875 Mur ligase family, glutamate ligase domain BCQ_4501 PF08245 Mur ligase middle domain BCQ_4503 PF01580 FtsK/SpoIIIE family BCQ_4503 PF17854 FtsK alpha domain BCQ_4503 PF09397 Ftsk gamma domain BCQ_4505 PF01588 Putative tRNA binding domain BCQ_4505 PF14794 Domain of unknown function (DUF4479) BCQ_4506 PF07285 Protein of unknown function (DUF1444) BCQ_4507 PF00085 Thioredoxin BCQ_4508 PF01931 Protein of unknown function DUF84 BCQ_4509 PF05343 M42 glutamyl aminopeptidase BCQ_4511 PF00753 Metallo-beta-lactamase superfamily BCQ_4512 PF02390 Putative methyltransferase BCQ_4513 PF14165 YtzH-like protein BCQ_4514 PF01636 Phosphotransferase enzyme family BCQ_4515 PF00128 Alpha amylase, catalytic domain BCQ_4515 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BCQ_4515 PF17999 Pullulanase N1-terminal domain BCQ_4516 PF02834 LigT like Phosphoesterase BCQ_4517 PF01546 Peptidase family M20/M25/M40 BCQ_4518 PF08220 DeoR-like helix-turn-helix domain BCQ_4519 PF00849 RNA pseudouridylate synthase BCQ_4519 PF01479 S4 domain BCQ_4520 PF01943 Polysaccharide biosynthesis protein BCQ_4520 PF14667 Polysaccharide biosynthesis C-terminal domain BCQ_4523 PF07690 Major Facilitator Superfamily BCQ_4524 PF01022 Bacterial regulatory protein, arsR family BCQ_4525 PF08327 Activator of Hsp90 ATPase homolog 1-like protein BCQ_4527 PF10957 Sporulation protein Cse60 BCQ_4528 PF02559 CarD-like/TRCF domain BCQ_4530 PF06800 Sugar transport protein BCQ_4533 PF02391 MoaE protein BCQ_4534 PF12323 Helix-turn-helix domain BCQ_4534 PF07282 Putative transposase DNA-binding domain BCQ_4534 PF01385 Probable transposase BCQ_4536 PF03205 Molybdopterin guanine dinucleotide synthesis protein B BCQ_4537 PF00994 Probable molybdopterin binding domain BCQ_4537 PF03454 MoeA C-terminal region (domain IV) BCQ_4537 PF03453 MoeA N-terminal region (domain I and II) BCQ_4538 PF01967 MoaC family BCQ_4539 PF00899 ThiF family BCQ_4540 PF06463 Molybdenum Cofactor Synthesis C BCQ_4540 PF04055 Radical SAM superfamily BCQ_4544 PF00581 Rhodanese-like domain BCQ_4546 PF00561 alpha/beta hydrolase fold BCQ_4547 PF03323 Bacillus/Clostridium GerA spore germination protein BCQ_4548 PF03845 Spore germination protein BCQ_4553 PF13603 Leucyl-tRNA synthetase, Domain 2 BCQ_4553 PF08264 Anticodon-binding domain of tRNA BCQ_4553 PF09334 tRNA synthetases class I (M) BCQ_4553 PF00133 tRNA synthetases class I (I, L, M and V) BCQ_4554 PF07690 Major Facilitator Superfamily BCQ_4555 PF00999 Sodium/hydrogen exchanger family BCQ_4556 PF02080 TrkA-C domain BCQ_4557 PF00589 Phage integrase family BCQ_4559 PF00005 ABC transporter BCQ_4560 PF04235 Protein of unknown function (DUF418) BCQ_4560 PF07786 Protein of unknown function (DUF1624) BCQ_4562 PF10732 Protein of unknown function (DUF2524) BCQ_4563 PF16199 Radical_SAM C-terminal domain BCQ_4563 PF04055 Radical SAM superfamily BCQ_4564 PF06962 Putative rRNA methylase BCQ_4565 PF13732 Domain of unknown function (DUF4162) BCQ_4565 PF00005 ABC transporter BCQ_4567 PF01177 Asp/Glu/Hydantoin racemase BCQ_4572 PF10776 Protein of unknown function (DUF2600) BCQ_4573 PF12146 Serine aminopeptidase, S33 BCQ_4574 PF00132 Bacterial transferase hexapeptide (six repeats) BCQ_4575 PF01569 PAP2 superfamily BCQ_4576 PF13439 Glycosyltransferase Family 4 BCQ_4576 PF00534 Glycosyl transferases group 1 BCQ_4577 PF12804 MobA-like NTP transferase domain BCQ_4578 PF00994 Probable molybdopterin binding domain BCQ_4581 PF13302 Acetyltransferase (GNAT) domain BCQ_4582 PF02772 S-adenosylmethionine synthetase, central domain BCQ_4582 PF00438 S-adenosylmethionine synthetase, N-terminal domain BCQ_4582 PF02773 S-adenosylmethionine synthetase, C-terminal domain BCQ_4583 PF01293 Phosphoenolpyruvate carboxykinase BCQ_4589 PF00512 His Kinase A (phospho-acceptor) domain BCQ_4589 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCQ_4589 PF13426 PAS domain BCQ_4589 PF00989 PAS fold BCQ_4589 PF13188 PAS domain BCQ_4590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCQ_4590 PF00512 His Kinase A (phospho-acceptor) domain BCQ_4590 PF00989 PAS fold BCQ_4590 PF08447 PAS fold BCQ_4591 PF08386 TAP-like protein BCQ_4591 PF00561 alpha/beta hydrolase fold BCQ_4592 PF00884 Sulfatase BCQ_4597 PF00005 ABC transporter BCQ_4598 PF00528 Binding-protein-dependent transport system inner membrane component BCQ_4601 PF13419 Haloacid dehalogenase-like hydrolase BCQ_4603 PF00293 NUDIX domain BCQ_4606 PF02664 S-Ribosylhomocysteinase (LuxS) BCQ_4607 PF01809 Putative membrane protein insertion efficiency factor BCQ_4608 PF00484 Carbonic anhydrase BCQ_4609 PF01654 Cytochrome bd terminal oxidase subunit I BCQ_4610 PF02322 Cytochrome bd terminal oxidase subunit II BCQ_4611 PF10676 Spore germination protein gerPA/gerPF BCQ_4615 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BCQ_4615 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BCQ_4620 PF04012 PspA/IM30 family BCQ_4622 PF07664 Ferrous iron transport protein B C terminus BCQ_4622 PF17910 FeoB cytosolic helical domain BCQ_4622 PF02421 Ferrous iron transport protein B BCQ_4622 PF07670 Nucleoside recognition BCQ_4624 PF09515 Thiamine transporter protein (Thia_YuaJ) BCQ_4625 PF00672 HAMP domain BCQ_4625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCQ_4625 PF00512 His Kinase A (phospho-acceptor) domain BCQ_4626 PF00486 Transcriptional regulatory protein, C terminal BCQ_4626 PF00072 Response regulator receiver domain BCQ_4629 PF01520 N-acetylmuramoyl-L-alanine amidase BCQ_4629 PF00395 S-layer homology domain BCQ_4633 PF00781 Diacylglycerol kinase catalytic domain BCQ_4637 PF02687 FtsX-like permease family BCQ_4638 PF00005 ABC transporter BCQ_4641 PF09335 SNARE associated Golgi protein BCQ_4642 PF00398 Ribosomal RNA adenine dimethylase BCQ_4643 PF12833 Helix-turn-helix domain BCQ_4643 PF02311 AraC-like ligand binding domain BCQ_4645 PF13333 Integrase core domain BCQ_4645 PF00665 Integrase core domain BCQ_4645 PF13276 HTH-like domain BCQ_4647 PF02687 FtsX-like permease family BCQ_4648 PF00005 ABC transporter BCQ_4649 PF06445 GyrI-like small molecule binding domain BCQ_4649 PF12833 Helix-turn-helix domain BCQ_4650 PF07853 Protein of unknown function (DUF1648) BCQ_4650 PF13630 SdpI/YhfL protein family BCQ_4651 PF01022 Bacterial regulatory protein, arsR family BCQ_4652 PF00072 Response regulator receiver domain BCQ_4652 PF00486 Transcriptional regulatory protein, C terminal BCQ_4653 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCQ_4654 PF02687 FtsX-like permease family BCQ_4655 PF02687 FtsX-like permease family BCQ_4656 PF00005 ABC transporter BCQ_4657 PF02687 FtsX-like permease family BCQ_4659 PF02447 GntP family permease BCQ_4662 PF07071 KDGP aldolase BCQ_4663 PF03841 L-seryl-tRNA selenium transferase BCQ_4664 PF01979 Amidohydrolase family BCQ_4665 PF02557 D-alanyl-D-alanine carboxypeptidase BCQ_4666 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCQ_4666 PF00512 His Kinase A (phospho-acceptor) domain BCQ_4667 PF00486 Transcriptional regulatory protein, C terminal BCQ_4667 PF00072 Response regulator receiver domain BCQ_4668 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BCQ_4668 PF13378 Enolase C-terminal domain-like BCQ_4669 PF13193 AMP-binding enzyme C-terminal domain BCQ_4669 PF00501 AMP-binding enzyme BCQ_4671 PF00378 Enoyl-CoA hydratase/isomerase BCQ_4672 PF00561 alpha/beta hydrolase fold BCQ_4673 PF16582 Middle domain of thiamine pyrophosphate BCQ_4673 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BCQ_4673 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BCQ_4674 PF00425 chorismate binding enzyme BCQ_4675 PF01040 UbiA prenyltransferase family BCQ_4676 PF01258 Prokaryotic dksA/traR C4-type zinc finger BCQ_4677 PF00313 'Cold-shock' DNA-binding domain BCQ_4681 PF00343 Carbohydrate phosphorylase BCQ_4682 PF00534 Glycosyl transferases group 1 BCQ_4682 PF08323 Starch synthase catalytic domain BCQ_4683 PF00483 Nucleotidyl transferase BCQ_4684 PF00483 Nucleotidyl transferase BCQ_4685 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BCQ_4685 PF00128 Alpha amylase, catalytic domain BCQ_4685 PF02806 Alpha amylase, C-terminal all-beta domain BCQ_4688 PF02225 PA domain BCQ_4688 PF00082 Subtilase family BCQ_4688 PF05922 Peptidase inhibitor I9 BCQ_4688 PF13860 FlgD Ig-like domain BCQ_4689 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BCQ_4689 PF00056 lactate/malate dehydrogenase, NAD binding domain BCQ_4708 PF05697 Bacterial trigger factor protein (TF) BCQ_4708 PF05698 Bacterial trigger factor protein (TF) C-terminus BCQ_4717 PF02308 MgtC family BCQ_4718 PF02254 TrkA-N domain BCQ_4718 PF07885 Ion channel BCQ_4719 PF08868 YugN-like family BCQ_4720 PF00342 Phosphoglucose isomerase BCQ_4721 PF04070 Domain of unknown function (DUF378) BCQ_4722 PF00575 S1 RNA binding domain BCQ_4723 PF00155 Aminotransferase class I and II BCQ_4724 PF01037 Lrp/AsnC ligand binding domain BCQ_4725 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BCQ_4725 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BCQ_4726 PF00561 alpha/beta hydrolase fold BCQ_4726 PF08386 TAP-like protein BCQ_4728 PF00155 Aminotransferase class I and II BCQ_4731 PF08810 Kinase associated protein B BCQ_4732 PF00929 Exonuclease BCQ_4733 PF03600 Citrate transporter BCQ_4736 PF03129 Anticodon binding domain BCQ_4736 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BCQ_4737 PF03061 Thioesterase superfamily BCQ_4739 PF02632 BioY family BCQ_4740 PF00483 Nucleotidyl transferase BCQ_4741 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BCQ_4741 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BCQ_4741 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BCQ_4741 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BCQ_4742 PF10372 Bacterial membrane-spanning protein N-terminus BCQ_4742 PF02457 DisA bacterial checkpoint controller nucleotide-binding BCQ_4743 PF00883 Cytosol aminopeptidase family, catalytic domain BCQ_4743 PF02789 Cytosol aminopeptidase family, N-terminal domain BCQ_4744 PF06725 3D domain BCQ_4746 PF00293 NUDIX domain BCQ_4746 PF13344 Haloacid dehalogenase-like hydrolase BCQ_4747 PF07992 Pyridine nucleotide-disulphide oxidoreductase BCQ_4748 PF07992 Pyridine nucleotide-disulphide oxidoreductase BCQ_4749 PF06445 GyrI-like small molecule binding domain BCQ_4752 PF04463 Protein of unknown function (DUF523) BCQ_4755 PF01521 Iron-sulphur cluster biosynthesis BCQ_4756 PF01678 Diaminopimelate epimerase BCQ_4757 PF07293 Protein of unknown function (DUF1450) BCQ_4758 PF07992 Pyridine nucleotide-disulphide oxidoreductase BCQ_4759 PF00005 ABC transporter BCQ_4759 PF09383 NIL domain BCQ_4760 PF03649 Uncharacterised protein family (UPF0014) BCQ_4761 PF03831 PhnA domain BCQ_4761 PF08274 PhnA Zinc-Ribbon BCQ_4769 PF07315 Protein of unknown function (DUF1462) BCQ_4770 PF01106 NifU-like domain BCQ_4773 PF04608 Phosphatidylglycerophosphatase A BCQ_4775 PF02525 Flavodoxin-like fold BCQ_4777 PF13344 Haloacid dehalogenase-like hydrolase BCQ_4779 PF01934 Protein of unknown function DUF86 BCQ_4780 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded BCQ_4783 PF06265 Protein of unknown function (DUF1027) BCQ_4784 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) BCQ_4785 PF13411 MerR HTH family regulatory protein BCQ_4785 PF07739 TipAS antibiotic-recognition domain BCQ_4786 PF10086 YhfC intramembrane metalloprotease BCQ_4790 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family BCQ_4790 PF04055 Radical SAM superfamily BCQ_4791 PF01551 Peptidase family M23 BCQ_4793 PF08827 Domain of unknown function (DUF1805) BCQ_4794 PF02872 5'-nucleotidase, C-terminal domain BCQ_4795 PF01458 Uncharacterized protein family (UPF0051) BCQ_4796 PF01592 NifU-like N terminal domain BCQ_4797 PF00266 Aminotransferase class-V BCQ_4798 PF01458 Uncharacterized protein family (UPF0051) BCQ_4799 PF00005 ABC transporter BCQ_4801 PF03180 NLPA lipoprotein BCQ_4802 PF03180 NLPA lipoprotein BCQ_4803 PF00528 Binding-protein-dependent transport system inner membrane component BCQ_4804 PF00005 ABC transporter BCQ_4804 PF09383 NIL domain BCQ_4806 PF00085 Thioredoxin BCQ_4807 PF01751 Toprim domain BCQ_4808 PF01597 Glycine cleavage H-protein BCQ_4809 PF03960 ArsC family BCQ_4814 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BCQ_4814 PF00056 lactate/malate dehydrogenase, NAD binding domain BCQ_4819 PF01381 Helix-turn-helix BCQ_4819 PF08671 Anti-repressor SinI BCQ_4821 PF13305 Tetracyclin repressor-like, C-terminal domain BCQ_4821 PF00440 Bacterial regulatory proteins, tetR family BCQ_4822 PF00753 Metallo-beta-lactamase superfamily BCQ_4823 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BCQ_4823 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BCQ_4823 PF02770 Acyl-CoA dehydrogenase, middle domain BCQ_4824 PF02803 Thiolase, C-terminal domain BCQ_4824 PF00108 Thiolase, N-terminal domain BCQ_4825 PF00378 Enoyl-CoA hydratase/isomerase BCQ_4825 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BCQ_4825 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BCQ_4827 PF14115 YuzL-like protein BCQ_4828 PF00768 D-alanyl-D-alanine carboxypeptidase BCQ_4828 PF07943 Penicillin-binding protein 5, C-terminal domain BCQ_4829 PF01619 Proline dehydrogenase BCQ_4830 PF10835 Protein of unknown function (DUF2573) BCQ_4831 PF01910 Thiamine-binding protein BCQ_4832 PF00672 HAMP domain BCQ_4832 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BCQ_4832 PF02743 Cache domain BCQ_4833 PF01385 Probable transposase BCQ_4833 PF12323 Helix-turn-helix domain BCQ_4833 PF07282 Putative transposase DNA-binding domain BCQ_4837 PF07690 Major Facilitator Superfamily BCQ_4838 PF13520 Amino acid permease BCQ_4841 PF02096 60Kd inner membrane protein BCQ_4843 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BCQ_4843 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BCQ_4850 PF09335 SNARE associated Golgi protein BCQ_4852 PF03734 L,D-transpeptidase catalytic domain BCQ_4852 PF17969 L,D-transpeptidase C-terminal domain BCQ_4853 PF00486 Transcriptional regulatory protein, C terminal BCQ_4853 PF00072 Response regulator receiver domain BCQ_4854 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCQ_4854 PF00512 His Kinase A (phospho-acceptor) domain BCQ_4854 PF16736 Single Cache-like BCQ_4854 PF00989 PAS fold BCQ_4856 PF09334 tRNA synthetases class I (M) BCQ_4856 PF08264 Anticodon-binding domain of tRNA BCQ_4858 PF02743 Cache domain BCQ_4858 PF00672 HAMP domain BCQ_4858 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BCQ_4859 PF02743 Cache domain BCQ_4859 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BCQ_4859 PF00672 HAMP domain BCQ_4860 PF01883 Iron-sulfur cluster assembly protein BCQ_4861 PF01447 Thermolysin metallopeptidase, catalytic domain BCQ_4861 PF02868 Thermolysin metallopeptidase, alpha-helical domain BCQ_4861 PF03413 Peptidase propeptide and YPEB domain BCQ_4861 PF07504 Fungalysin/Thermolysin Propeptide Motif BCQ_4862 PF02678 Pirin BCQ_4862 PF17954 Quercetinase C-terminal cupin domain BCQ_4863 PF01047 MarR family BCQ_4865 PF00999 Sodium/hydrogen exchanger family BCQ_4866 PF02080 TrkA-C domain BCQ_4867 PF01235 Sodium:alanine symporter family BCQ_4868 PF00210 Ferritin-like domain BCQ_4871 PF03641 Possible lysine decarboxylase BCQ_4873 PF00210 Ferritin-like domain BCQ_4875 PF01773 Na+ dependent nucleoside transporter N-terminus BCQ_4875 PF07662 Na+ dependent nucleoside transporter C-terminus BCQ_4876 PF01773 Na+ dependent nucleoside transporter N-terminus BCQ_4876 PF07662 Na+ dependent nucleoside transporter C-terminus BCQ_4877 PF01235 Sodium:alanine symporter family BCQ_4878 PF01235 Sodium:alanine symporter family BCQ_4879 PF13460 NAD(P)H-binding BCQ_4882 PF00248 Aldo/keto reductase family BCQ_4883 PF07690 Major Facilitator Superfamily BCQ_4884 PF01638 HxlR-like helix-turn-helix BCQ_4885 PF07849 Protein of unknown function (DUF1641) BCQ_4886 PF07992 Pyridine nucleotide-disulphide oxidoreductase BCQ_4887 PF00579 tRNA synthetases class I (W and Y) BCQ_4887 PF01479 S4 domain BCQ_4888 PF01565 FAD binding domain BCQ_4888 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain BCQ_4892 PF17202 Single cache domain 3 BCQ_4892 PF00672 HAMP domain BCQ_4892 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BCQ_4894 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BCQ_4895 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BCQ_4898 PF07690 Major Facilitator Superfamily BCQ_4899 PF12848 ABC transporter BCQ_4899 PF00005 ABC transporter BCQ_4900 PF13302 Acetyltransferase (GNAT) domain BCQ_4901 PF06146 Phosphate-starvation-inducible E BCQ_4903 PF00005 ABC transporter BCQ_4904 PF01032 FecCD transport family BCQ_4905 PF01032 FecCD transport family BCQ_4907 PF00486 Transcriptional regulatory protein, C terminal BCQ_4907 PF00072 Response regulator receiver domain BCQ_4910 PF00005 ABC transporter BCQ_4912 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCQ_4912 PF00512 His Kinase A (phospho-acceptor) domain BCQ_4913 PF00486 Transcriptional regulatory protein, C terminal BCQ_4913 PF00072 Response regulator receiver domain BCQ_4914 PF09335 SNARE associated Golgi protein BCQ_4915 PF13649 Methyltransferase domain BCQ_4918 PF00005 ABC transporter BCQ_4923 PF00692 dUTPase BCQ_4924 PF12833 Helix-turn-helix domain BCQ_4924 PF06445 GyrI-like small molecule binding domain BCQ_4927 PF00551 Formyl transferase BCQ_4927 PF02911 Formyl transferase, C-terminal domain BCQ_4931 PF04235 Protein of unknown function (DUF418) BCQ_4933 PF01668 SmpB protein BCQ_4934 PF17876 Cold shock domain BCQ_4934 PF08206 Ribonuclease B OB domain BCQ_4934 PF00773 RNB domain BCQ_4934 PF00575 S1 RNA binding domain BCQ_4935 PF12146 Serine aminopeptidase, S33 BCQ_4936 PF03840 Preprotein translocase SecG subunit BCQ_4937 PF04172 LrgB-like family BCQ_4938 PF03788 LrgA family BCQ_4939 PF01156 Inosine-uridine preferring nucleoside hydrolase BCQ_4940 PF00113 Enolase, C-terminal TIM barrel domain BCQ_4940 PF03952 Enolase, N-terminal domain BCQ_4941 PF06415 BPG-independent PGAM N-terminus (iPGM_N) BCQ_4941 PF01676 Metalloenzyme superfamily BCQ_4942 PF00121 Triosephosphate isomerase BCQ_4943 PF00162 Phosphoglycerate kinase BCQ_4944 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BCQ_4944 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BCQ_4945 PF04198 Putative sugar-binding domain BCQ_4947 PF04963 Sigma-54 factor, core binding domain BCQ_4947 PF00309 Sigma-54 factor, Activator interacting domain (AID) BCQ_4947 PF04552 Sigma-54, DNA binding domain BCQ_4949 PF13732 Domain of unknown function (DUF4162) BCQ_4949 PF00005 ABC transporter BCQ_4950 PF00082 Subtilase family BCQ_4951 PF03412 Peptidase C39 family BCQ_4951 PF00664 ABC transporter transmembrane region BCQ_4951 PF00005 ABC transporter BCQ_4952 PF00196 Bacterial regulatory proteins, luxR family BCQ_4952 PF00072 Response regulator receiver domain BCQ_4953 PF00348 Polyprenyl synthetase BCQ_4954 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCQ_4954 PF07730 Histidine kinase BCQ_4955 PF00072 Response regulator receiver domain BCQ_4955 PF00196 Bacterial regulatory proteins, luxR family BCQ_4967 PF03862 SpoVAC/SpoVAEB sporulation membrane protein BCQ_4968 PF07451 Stage V sporulation protein AD (SpoVAD) BCQ_4969 PF03862 SpoVAC/SpoVAEB sporulation membrane protein BCQ_4971 PF04239 Protein of unknown function (DUF421) BCQ_4972 PF00574 Clp protease BCQ_4973 PF00381 PTS HPr component phosphorylation site BCQ_4974 PF10298 WhiA N-terminal LAGLIDADG-like domain BCQ_4974 PF02650 WhiA C-terminal HTH domain BCQ_4974 PF14527 WhiA LAGLIDADG-like domain BCQ_4975 PF01933 Uncharacterised protein family UPF0052 BCQ_4976 PF03668 P-loop ATPase protein family BCQ_4977 PF00293 NUDIX domain BCQ_4979 PF07992 Pyridine nucleotide-disulphide oxidoreductase BCQ_4981 PF14602 Hexapeptide repeat of succinyl-transferase BCQ_4982 PF13419 Haloacid dehalogenase-like hydrolase BCQ_4983 PF01790 Prolipoprotein diacylglyceryl transferase BCQ_4984 PF02603 HPr Serine kinase N terminus BCQ_4984 PF07475 HPr Serine kinase C-terminal domain BCQ_4985 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV BCQ_4988 PF17760 UvrA interaction domain BCQ_4988 PF17755 UvrA DNA-binding domain BCQ_4988 PF00005 ABC transporter BCQ_4989 PF00271 Helicase conserved C-terminal domain BCQ_4989 PF02151 UvrB/uvrC motif BCQ_4989 PF12344 Ultra-violet resistance protein B BCQ_4989 PF17757 UvrB interaction domain BCQ_4989 PF04851 Type III restriction enzyme, res subunit BCQ_4991 PF13411 MerR HTH family regulatory protein BCQ_4991 PF07739 TipAS antibiotic-recognition domain BCQ_4997 PF03601 Conserved hypothetical protein 698 BCQ_4998 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BCQ_4998 PF03466 LysR substrate binding domain BCQ_4999 PF09278 MerR, DNA binding BCQ_4999 PF00376 MerR family regulatory protein BCQ_5000 PF03358 NADPH-dependent FMN reductase BCQ_5001 PF16326 ABC transporter C-terminal domain BCQ_5001 PF00005 ABC transporter BCQ_5001 PF12848 ABC transporter BCQ_5002 PF01906 Putative heavy-metal-binding BCQ_5003 PF00005 ABC transporter BCQ_5003 PF00664 ABC transporter transmembrane region BCQ_5004 PF17820 PDZ domain BCQ_5005 PF17820 PDZ domain BCQ_5005 PF01471 Putative peptidoglycan binding domain BCQ_5005 PF03572 Peptidase family S41 BCQ_5006 PF02687 FtsX-like permease family BCQ_5006 PF18075 FtsX extracellular domain BCQ_5007 PF00005 ABC transporter BCQ_5008 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BCQ_5009 PF03462 PCRF domain BCQ_5009 PF00472 RF-1 domain BCQ_5010 PF01043 SecA preprotein cross-linking domain BCQ_5010 PF07517 SecA DEAD-like domain BCQ_5010 PF02810 SEC-C motif BCQ_5010 PF07516 SecA Wing and Scaffold domain BCQ_5011 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein BCQ_5011 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus BCQ_5012 PF00313 'Cold-shock' DNA-binding domain BCQ_5014 PF04851 Type III restriction enzyme, res subunit BCQ_5014 PF00271 Helicase conserved C-terminal domain BCQ_5015 PF01476 LysM domain BCQ_5015 PF00877 NlpC/P60 family BCQ_5016 PF01638 HxlR-like helix-turn-helix BCQ_5018 PF02645 Uncharacterised protein, DegV family COG1307 BCQ_5019 PF01205 Uncharacterized protein family UPF0029 BCQ_5019 PF09186 Domain of unknown function (DUF1949) BCQ_5020 PF03816 Cell envelope-related transcriptional attenuator domain BCQ_5021 PF02350 UDP-N-acetylglucosamine 2-epimerase BCQ_5022 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BCQ_5022 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BCQ_5022 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BCQ_5024 PF00953 Glycosyl transferase family 4 BCQ_5027 PF00874 PRD domain BCQ_5027 PF00158 Sigma-54 interaction domain BCQ_5027 PF03610 PTS system fructose IIA component BCQ_5029 PF02417 Chromate transporter BCQ_5030 PF04794 YdjC-like protein BCQ_5031 PF02056 Family 4 glycosyl hydrolase BCQ_5031 PF11975 Family 4 glycosyl hydrolase C-terminal domain BCQ_5032 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit BCQ_5033 PF02378 Phosphotransferase system, EIIC BCQ_5034 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BCQ_5036 PF02675 S-adenosylmethionine decarboxylase BCQ_5039 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit BCQ_5040 PF02378 Phosphotransferase system, EIIC BCQ_5041 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BCQ_5042 PF00375 Sodium:dicarboxylate symporter family BCQ_5044 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BCQ_5049 PF03466 LysR substrate binding domain BCQ_5049 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BCQ_5052 PF01654 Cytochrome bd terminal oxidase subunit I BCQ_5053 PF02322 Cytochrome bd terminal oxidase subunit II BCQ_5054 PF02040 Arsenical pump membrane protein BCQ_5055 PF01964 Radical SAM ThiC family BCQ_5055 PF13667 ThiC-associated domain BCQ_5056 PF02652 L-lactate permease BCQ_5058 PF09988 Uncharacterized metal-binding protein (DUF2227) BCQ_5060 PF00884 Sulfatase BCQ_5062 PF01063 Amino-transferase class IV BCQ_5063 PF00877 NlpC/P60 family BCQ_5063 PF01476 LysM domain BCQ_5064 PF01773 Na+ dependent nucleoside transporter N-terminus BCQ_5064 PF07662 Na+ dependent nucleoside transporter C-terminus BCQ_5068 PF02028 BCCT, betaine/carnitine/choline family transporter BCQ_5069 PF06725 3D domain BCQ_5069 PF01476 LysM domain BCQ_5074 PF04434 SWIM zinc finger BCQ_5075 PF00176 SNF2 family N-terminal domain BCQ_5075 PF00271 Helicase conserved C-terminal domain BCQ_5075 PF12419 SNF2 Helicase protein BCQ_5081 PF04542 Sigma-70 region 2 BCQ_5081 PF04545 Sigma-70, region 4 BCQ_5082 PF04893 Yip1 domain BCQ_5083 PF12704 MacB-like periplasmic core domain BCQ_5083 PF02687 FtsX-like permease family BCQ_5084 PF00005 ABC transporter BCQ_5086 PF07690 Major Facilitator Superfamily BCQ_5089 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCQ_5089 PF00512 His Kinase A (phospho-acceptor) domain BCQ_5089 PF00989 PAS fold BCQ_5089 PF16736 Single Cache-like BCQ_5090 PF00486 Transcriptional regulatory protein, C terminal BCQ_5090 PF00072 Response regulator receiver domain BCQ_5091 PF01238 Phosphomannose isomerase type I BCQ_5092 PF02378 Phosphotransferase system, EIIC BCQ_5092 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BCQ_5092 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BCQ_5093 PF00874 PRD domain BCQ_5093 PF05043 Mga helix-turn-helix domain BCQ_5093 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BCQ_5093 PF08279 HTH domain BCQ_5094 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BCQ_5094 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BCQ_5094 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BCQ_5094 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BCQ_5095 PF16363 GDP-mannose 4,6 dehydratase BCQ_5096 PF16363 GDP-mannose 4,6 dehydratase BCQ_5097 PF12804 MobA-like NTP transferase domain BCQ_5098 PF00892 EamA-like transporter family BCQ_5102 PF04991 LicD family BCQ_5105 PF01238 Phosphomannose isomerase type I BCQ_5106 PF00483 Nucleotidyl transferase BCQ_5106 PF01050 Mannose-6-phosphate isomerase BCQ_5108 PF00534 Glycosyl transferases group 1 BCQ_5108 PF13439 Glycosyltransferase Family 4 BCQ_5110 PF00535 Glycosyl transferase family 2 BCQ_5111 PF02397 Bacterial sugar transferase BCQ_5112 PF00483 Nucleotidyl transferase BCQ_5114 PF13614 AAA domain BCQ_5115 PF13807 G-rich domain on putative tyrosine kinase BCQ_5115 PF02706 Chain length determinant protein BCQ_5116 PF13614 AAA domain BCQ_5117 PF07977 FabA-like domain BCQ_5120 PF12116 Stage III sporulation protein D BCQ_5122 PF01551 Peptidase family M23 BCQ_5124 PF00005 ABC transporter BCQ_5125 PF04397 LytTr DNA-binding domain BCQ_5125 PF00072 Response regulator receiver domain BCQ_5126 PF08486 Stage II sporulation protein BCQ_5127 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BCQ_5129 PF06612 Protein of unknown function (DUF1146) BCQ_5130 PF00361 Proton-conducting membrane transporter BCQ_5131 PF00361 Proton-conducting membrane transporter BCQ_5132 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BCQ_5132 PF00361 Proton-conducting membrane transporter BCQ_5132 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus BCQ_5133 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L BCQ_5134 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 BCQ_5136 PF00146 NADH dehydrogenase BCQ_5137 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit BCQ_5138 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit BCQ_5139 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit BCQ_5140 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 BCQ_5141 PF00990 Diguanylate cyclase, GGDEF domain BCQ_5141 PF00563 EAL domain BCQ_5141 PF03707 Bacterial signalling protein N terminal repeat BCQ_5144 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain BCQ_5144 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain BCQ_5145 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BCQ_5145 PF02874 ATP synthase alpha/beta family, beta-barrel domain BCQ_5146 PF00231 ATP synthase BCQ_5147 PF02874 ATP synthase alpha/beta family, beta-barrel domain BCQ_5147 PF00306 ATP synthase alpha/beta chain, C terminal domain BCQ_5147 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BCQ_5148 PF00213 ATP synthase delta (OSCP) subunit BCQ_5149 PF00430 ATP synthase B/B' CF(0) BCQ_5150 PF00137 ATP synthase subunit C BCQ_5151 PF00119 ATP synthase A chain BCQ_5152 PF03899 ATP synthase I chain BCQ_5156 PF00464 Serine hydroxymethyltransferase BCQ_5157 PF04260 Protein of unknown function (DUF436) BCQ_5158 PF02502 Ribose/Galactose Isomerase BCQ_5159 PF01451 Low molecular weight phosphotyrosine protein phosphatase BCQ_5160 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BCQ_5161 PF07681 DoxX BCQ_5162 PF01613 Flavin reductase like domain BCQ_5165 PF02659 Putative manganese efflux pump BCQ_5166 PF01300 Telomere recombination BCQ_5166 PF03481 Putative GTP-binding controlling metal-binding BCQ_5168 PF09551 Stage II sporulation protein R (spore_II_R) BCQ_5169 PF17827 PrmC N-terminal domain BCQ_5169 PF13847 Methyltransferase domain BCQ_5170 PF03462 PCRF domain BCQ_5170 PF00472 RF-1 domain BCQ_5171 PF00265 Thymidine kinase BCQ_5172 PF07498 Rho termination factor, N-terminal domain BCQ_5172 PF07497 Rho termination factor, RNA-binding domain BCQ_5172 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BCQ_5173 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded BCQ_5175 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BCQ_5176 PF01116 Fructose-bisphosphate aldolase class-II BCQ_5177 PF00072 Response regulator receiver domain BCQ_5178 PF10740 Domain of unknown function (DUF2529) BCQ_5179 PF00117 Glutamine amidotransferase class-I BCQ_5179 PF06418 CTP synthase N-terminus BCQ_5180 PF05066 HB1, ASXL, restriction endonuclease HTH domain BCQ_5182 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BCQ_5182 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BCQ_5182 PF02770 Acyl-CoA dehydrogenase, middle domain BCQ_5183 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BCQ_5183 PF02770 Acyl-CoA dehydrogenase, middle domain BCQ_5183 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BCQ_5184 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BCQ_5184 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BCQ_5185 PF02803 Thiolase, C-terminal domain BCQ_5185 PF00108 Thiolase, N-terminal domain BCQ_5186 PF13183 4Fe-4S dicluster domain BCQ_5186 PF02754 Cysteine-rich domain BCQ_5187 PF13091 PLD-like domain BCQ_5188 PF03851 UV-endonuclease UvdE BCQ_5189 PF00563 EAL domain BCQ_5189 PF00990 Diguanylate cyclase, GGDEF domain BCQ_5189 PF03707 Bacterial signalling protein N terminal repeat BCQ_5193 PF00196 Bacterial regulatory proteins, luxR family BCQ_5193 PF00072 Response regulator receiver domain BCQ_5194 PF07730 Histidine kinase BCQ_5194 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCQ_5196 PF00005 ABC transporter BCQ_5197 PF00557 Metallopeptidase family M24 BCQ_5198 PF01473 Putative cell wall binding repeat BCQ_5198 PF02324 Glycosyl hydrolase family 70 BCQ_5199 PF04389 Peptidase family M28 BCQ_5199 PF02225 PA domain BCQ_5203 PF08281 Sigma-70, region 4 BCQ_5203 PF04542 Sigma-70 region 2 BCQ_5204 PF03485 Arginyl tRNA synthetase N terminal domain BCQ_5204 PF05746 DALR anticodon binding domain BCQ_5204 PF00750 tRNA synthetases class I (R) BCQ_5205 PF09148 Domain of unknown function (DUF1934) BCQ_5206 PF17676 LD-carboxypeptidase C-terminal domain BCQ_5206 PF02016 LD-carboxypeptidase N-terminal domain BCQ_5209 PF00491 Arginase family BCQ_5210 PF17284 Spermidine synthase tetramerisation domain BCQ_5211 PF07690 Major Facilitator Superfamily BCQ_5212 PF13411 MerR HTH family regulatory protein BCQ_5213 PF03009 Glycerophosphoryl diester phosphodiesterase family BCQ_5214 PF00912 Transglycosylase BCQ_5214 PF00905 Penicillin binding protein transpeptidase domain BCQ_5215 PF08741 YwhD family BCQ_5216 PF02163 Peptidase family M50 BCQ_5217 PF01361 Tautomerase enzyme BCQ_5219 PF01966 HD domain BCQ_5220 PF01497 Periplasmic binding protein BCQ_5221 PF00005 ABC transporter BCQ_5222 PF01032 FecCD transport family BCQ_5223 PF01032 FecCD transport family BCQ_5224 PF07293 Protein of unknown function (DUF1450) BCQ_5227 PF03099 Biotin/lipoate A/B protein ligase family BCQ_5228 PF01515 Phosphate acetyl/butaryl transferase BCQ_5230 PF00768 D-alanyl-D-alanine carboxypeptidase BCQ_5230 PF07943 Penicillin-binding protein 5, C-terminal domain BCQ_5231 PF07486 Cell Wall Hydrolase BCQ_5232 PF09671 Spore coat protein (Spore_GerQ) BCQ_5233 PF04241 Protein of unknown function (DUF423) BCQ_5235 PF02254 TrkA-N domain BCQ_5235 PF07885 Ion channel BCQ_5236 PF00860 Permease family BCQ_5239 PF12823 Domain of unknown function (DUF3817) BCQ_5240 PF03167 Uracil DNA glycosylase superfamily BCQ_5241 PF12679 ABC-2 family transporter protein BCQ_5242 PF00005 ABC transporter BCQ_5243 PF13472 GDSL-like Lipase/Acylhydrolase family BCQ_5244 PF00356 Bacterial regulatory proteins, lacI family BCQ_5244 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BCQ_5246 PF00742 Homoserine dehydrogenase BCQ_5246 PF03447 Homoserine dehydrogenase, NAD binding domain BCQ_5246 PF01842 ACT domain BCQ_5247 PF04204 Homoserine O-succinyltransferase BCQ_5248 PF01053 Cys/Met metabolism PLP-dependent enzyme BCQ_5249 PF13419 Haloacid dehalogenase-like hydrolase BCQ_5250 PF00027 Cyclic nucleotide-binding domain BCQ_5251 PF02525 Flavodoxin-like fold BCQ_5252 PF00072 Response regulator receiver domain BCQ_5252 PF00196 Bacterial regulatory proteins, luxR family BCQ_5253 PF07730 Histidine kinase BCQ_5253 PF13185 GAF domain BCQ_5254 PF08543 Phosphomethylpyrimidine kinase BCQ_5255 PF07694 5TMR of 5TMR-LYT BCQ_5255 PF00990 Diguanylate cyclase, GGDEF domain BCQ_5256 PF04328 Selenoprotein, putative BCQ_5257 PF13722 5TM C-terminal transporter carbon starvation CstA BCQ_5257 PF02554 Carbon starvation protein CstA BCQ_5258 PF04397 LytTr DNA-binding domain BCQ_5258 PF00072 Response regulator receiver domain BCQ_5259 PF07690 Major Facilitator Superfamily BCQ_5260 PF03808 Glycosyl transferase WecB/TagA/CpsF family BCQ_5261 PF00534 Glycosyl transferases group 1 BCQ_5261 PF13439 Glycosyltransferase Family 4 BCQ_5263 PF03458 UPF0126 domain BCQ_5264 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BCQ_5266 PF03061 Thioesterase superfamily BCQ_5267 PF00535 Glycosyl transferase family 2 BCQ_5270 PF00535 Glycosyl transferase family 2 BCQ_5273 PF00005 ABC transporter BCQ_5273 PF12848 ABC transporter BCQ_5275 PF00665 Integrase core domain BCQ_5275 PF02796 Helix-turn-helix domain of resolvase BCQ_5276 PF01695 IstB-like ATP binding protein BCQ_5277 PF00440 Bacterial regulatory proteins, tetR family BCQ_5278 PF00873 AcrB/AcrD/AcrF family BCQ_5279 PF01625 Peptide methionine sulfoxide reductase BCQ_5279 PF01641 SelR domain BCQ_5280 PF01594 AI-2E family transporter BCQ_5281 PF04172 LrgB-like family BCQ_5282 PF03788 LrgA family BCQ_5283 PF00072 Response regulator receiver domain BCQ_5283 PF04397 LytTr DNA-binding domain BCQ_5284 PF06580 Histidine kinase BCQ_5284 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCQ_5284 PF07694 5TMR of 5TMR-LYT BCQ_5284 PF13492 GAF domain BCQ_5285 PF07690 Major Facilitator Superfamily BCQ_5286 PF07690 Major Facilitator Superfamily BCQ_5287 PF02028 BCCT, betaine/carnitine/choline family transporter BCQ_5288 PF02898 Nitric oxide synthase, oxygenase domain BCQ_5289 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BCQ_5289 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BCQ_5291 PF02293 AmiS/UreI family transporter BCQ_5298 PF16363 GDP-mannose 4,6 dehydratase BCQ_5299 PF03006 Haemolysin-III related BCQ_5301 PF00271 Helicase conserved C-terminal domain BCQ_5301 PF03880 DbpA RNA binding domain BCQ_5301 PF00270 DEAD/DEAH box helicase BCQ_5302 PF00478 IMP dehydrogenase / GMP reductase domain BCQ_5303 PF01432 Peptidase family M3 BCQ_5303 PF08439 Oligopeptidase F BCQ_5305 PF02590 Predicted SPOUT methyltransferase BCQ_5307 PF13180 PDZ domain BCQ_5308 PF00753 Metallo-beta-lactamase superfamily BCQ_5309 PF09648 YycH protein BCQ_5310 PF07435 YycH protein BCQ_5311 PF00672 HAMP domain BCQ_5311 PF13426 PAS domain BCQ_5311 PF00512 His Kinase A (phospho-acceptor) domain BCQ_5311 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BCQ_5312 PF00486 Transcriptional regulatory protein, C terminal BCQ_5312 PF00072 Response regulator receiver domain BCQ_5317 PF00709 Adenylosuccinate synthetase BCQ_5318 PF00772 DnaB-like helicase N terminal domain BCQ_5318 PF03796 DnaB-like helicase C terminal domain BCQ_5319 PF03948 Ribosomal protein L9, C-terminal domain BCQ_5319 PF01281 Ribosomal protein L9, N-terminal domain BCQ_5320 PF02272 DHHA1 domain BCQ_5320 PF01368 DHH family BCQ_5321 PF09991 Predicted membrane protein (DUF2232) BCQ_5322 PF01084 Ribosomal protein S18 BCQ_5323 PF00436 Single-strand binding protein family BCQ_5324 PF01250 Ribosomal protein S6 BCQ_5325 PF06071 Protein of unknown function (DUF933) BCQ_5325 PF01926 50S ribosome-binding GTPase BCQ_5326 PF06107 Bacterial protein of unknown function (DUF951) BCQ_5327 PF00924 Mechanosensitive ion channel BCQ_5328 PF06866 Protein of unknown function (DUF1256) BCQ_5329 PF02195 ParB-like nuclease domain BCQ_5329 PF17762 HTH domain found in ParB protein BCQ_5330 PF13614 AAA domain BCQ_5331 PF17762 HTH domain found in ParB protein BCQ_5331 PF02195 ParB-like nuclease domain BCQ_5332 PF02527 rRNA small subunit methyltransferase G BCQ_5333 PF13932 GidA associated domain BCQ_5333 PF01134 Glucose inhibited division protein A BCQ_5334 PF01926 50S ribosome-binding GTPase BCQ_5334 PF10396 GTP-binding protein TrmE N-terminus BCQ_5334 PF12631 MnmE helical domain BCQ_5335 PF14804 Jag N-terminus BCQ_5335 PF01424 R3H domain BCQ_5336 PF02096 60Kd inner membrane protein BCQ_5337 PF00825 Ribonuclease P BCQ_5338 PF00468 Ribosomal protein L34 BCQ_PI011 PF01348 Type II intron maturase BCQ_PI011 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) BCQ_PI025 PF00082 Subtilase family BCQ_PI026 PF00440 Bacterial regulatory proteins, tetR family BCQ_PI030 PF00067 Cytochrome P450 BCQ_PI031 PF04439 Streptomycin adenylyltransferase BCQ_PI032 PF13302 Acetyltransferase (GNAT) domain BCQ_PI033 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase BCQ_PI034 PF12697 Alpha/beta hydrolase family BCQ_PI038 PF13276 HTH-like domain BCQ_PI038 PF00665 Integrase core domain BCQ_PI042 PF13276 HTH-like domain BCQ_PI042 PF00665 Integrase core domain BCQ_PI044 PF17418 Sporulation delaying protein SdpA BCQ_PI048 PF01037 Lrp/AsnC ligand binding domain BCQ_PI050 PF01609 Transposase DDE domain BCQ_PI051 PF04239 Protein of unknown function (DUF421) BCQ_PI052 PF13396 Phospholipase_D-nuclease N-terminal BCQ_PI052 PF13091 PLD-like domain BCQ_PI054 PF03323 Bacillus/Clostridium GerA spore germination protein BCQ_PI056 PF00239 Resolvase, N terminal domain BCQ_PI056 PF02796 Helix-turn-helix domain of resolvase BCQ_PI057 PF01526 Tn3 transposase DDE domain BCQ_PI057 PF13700 Domain of unknown function (DUF4158) BCQ_PI059 PF02899 Phage integrase, N-terminal SAM-like domain BCQ_PI059 PF00589 Phage integrase family BCQ_PI064 PF04740 LXG domain of WXG superfamily BCQ_PI064 PF14436 Bacterial EndoU nuclease BCQ_PI067 PF03323 Bacillus/Clostridium GerA spore germination protein BCQ_PI068 PF03845 Spore germination protein BCQ_PI072 PF02796 Helix-turn-helix domain of resolvase BCQ_PI072 PF00239 Resolvase, N terminal domain BCQ_PI073 PF13700 Domain of unknown function (DUF4158) BCQ_PI073 PF01526 Tn3 transposase DDE domain BCQ_PI074 PF05504 Spore germination B3/ GerAC like, C-terminal BCQ_PI078 PF00857 Isochorismatase family BCQ_PI082 PF00144 Beta-lactamase BCQ_PI086 PF13495 Phage integrase, N-terminal SAM-like domain BCQ_PI086 PF00589 Phage integrase family BCQ_PI089 PF18801 response regulator aspartate phosphatase H, N terminal BCQ_PI096 PF01022 Bacterial regulatory protein, arsR family BCQ_PI098 PF00565 Staphylococcal nuclease homologue BCQ_PI100 PF00664 ABC transporter transmembrane region BCQ_PI100 PF00005 ABC transporter BCQ_PI101 PF06463 Molybdenum Cofactor Synthesis C BCQ_PI101 PF04055 Radical SAM superfamily BCQ_PI104 PF00005 ABC transporter BCQ_PI106 PF00082 Subtilase family BCQ_PI108 PF01695 IstB-like ATP binding protein BCQ_PI109 PF00665 Integrase core domain BCQ_PI109 PF02796 Helix-turn-helix domain of resolvase BCQ_PI112 PF08378 Nuclease-related domain BCQ_PI119 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) BCQ_PI121 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) BCQ_PI125 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) BCQ_PI132 PF00665 Integrase core domain BCQ_PI132 PF13276 HTH-like domain BCQ_PI133 PF01022 Bacterial regulatory protein, arsR family BCQ_PI135 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading BCQ_PI135 PF18416 N-acetylglucosamine binding protein domain 2 BCQ_PI137 PF00269 Small, acid-soluble spore proteins, alpha/beta type BCQ_PI138 PF13426 PAS domain BCQ_PI138 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BCQ_PI138 PF08447 PAS fold BCQ_PI139 PF03413 Peptidase propeptide and YPEB domain BCQ_PI139 PF02868 Thermolysin metallopeptidase, alpha-helical domain BCQ_PI139 PF01447 Thermolysin metallopeptidase, catalytic domain BCQ_PI139 PF07504 Fungalysin/Thermolysin Propeptide Motif BCQ_PI142 PF08239 Bacterial SH3 domain BCQ_PI142 PF01476 LysM domain BCQ_PI142 PF00877 NlpC/P60 family BCQ_PI143 PF13276 HTH-like domain BCQ_PI143 PF00665 Integrase core domain BCQ_PI148 PF18801 response regulator aspartate phosphatase H, N terminal BCQ_PI153 PF13700 Domain of unknown function (DUF4158) BCQ_PI153 PF01526 Tn3 transposase DDE domain BCQ_PI155 PF02796 Helix-turn-helix domain of resolvase BCQ_PI155 PF00239 Resolvase, N terminal domain BCQ_PI156 PF01526 Tn3 transposase DDE domain BCQ_PI156 PF13700 Domain of unknown function (DUF4158) BCQ_PI160 PF01609 Transposase DDE domain BCQ_PI161 PF13333 Integrase core domain BCQ_PI161 PF00665 Integrase core domain BCQ_PI161 PF13276 HTH-like domain BCQ_PI164 PF03323 Bacillus/Clostridium GerA spore germination protein BCQ_PI165 PF03845 Spore germination protein BCQ_PI167 PF04239 Protein of unknown function (DUF421) BCQ_PI169 PF03862 SpoVAC/SpoVAEB sporulation membrane protein BCQ_PI170 PF07451 Stage V sporulation protein AD (SpoVAD) BCQ_PI171 PF03862 SpoVAC/SpoVAEB sporulation membrane protein BCQ_PI174 PF00589 Phage integrase family BCQ_PI174 PF02899 Phage integrase, N-terminal SAM-like domain BCQ_PI175 PF01609 Transposase DDE domain BCQ_PI177 PF18419 ATP-grasp-like domain BCQ_PI177 PF02655 ATP-grasp domain BCQ_PI177 PF04262 Glutamate-cysteine ligase BCQ_PI179 PF00756 Putative esterase BCQ_PI180 PF01638 HxlR-like helix-turn-helix BCQ_PI181 PF08240 Alcohol dehydrogenase GroES-like domain BCQ_PI181 PF00107 Zinc-binding dehydrogenase BCQ_PI182 PF00239 Resolvase, N terminal domain BCQ_PI182 PF02796 Helix-turn-helix domain of resolvase BCQ_PI184 PF00216 Bacterial DNA-binding protein BCQ_PI185 PF17209 Hfq protein BCQ_PI186 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin BCQ_PI186 PF18277 AbrB C-terminal domain BCQ_PI187 PF01022 Bacterial regulatory protein, arsR family BCQ_PI189 PF01526 Tn3 transposase DDE domain BCQ_PI189 PF13700 Domain of unknown function (DUF4158) BCQ_PI190 PF01609 Transposase DDE domain BCQ_PI194 PF01037 Lrp/AsnC ligand binding domain BCQ_PI196 PF00892 EamA-like transporter family BCQ_PI197 PF01588 Putative tRNA binding domain BCQ_PI200 PF04235 Protein of unknown function (DUF418) BCQ_PI202 PF13276 HTH-like domain BCQ_PI202 PF00665 Integrase core domain BCQ_PI202 PF13333 Integrase core domain BCQ_PI206 PF01385 Probable transposase BCQ_PI206 PF12323 Helix-turn-helix domain BCQ_PI206 PF07282 Putative transposase DNA-binding domain BCQ_PI212 PF12323 Helix-turn-helix domain BCQ_PI212 PF01385 Probable transposase BCQ_PI212 PF07282 Putative transposase DNA-binding domain BCQ_PI219 PF01348 Type II intron maturase BCQ_PI219 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) BCQ_PI220 PF09397 Ftsk gamma domain BCQ_PI220 PF01580 FtsK/SpoIIIE family BCQ_PI220 PF17854 FtsK alpha domain BCQ_PI228 PF04098 Rad52/22 family double-strand break repair protein BCQ_PT05 PF02811 PHP domain BCQ_PT05 PF14579 Helix-hairpin-helix motif BCQ_PT05 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BCQ_PT05 PF07733 Bacterial DNA polymerase III alpha NTPase domain BCQ_PT05 PF11490 DNA polymerase III polC-type N-terminus II BCQ_PT05 PF00929 Exonuclease BCQ_PT15 PF13457 GW (Gly-Tryp) dipeptide domain BCQ_PT15 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase BCQ_PT35 PF05065 Phage capsid family BCQ_PT36 PF14550 Putative phage serine protease XkdF BCQ_PT39 PF04466 Phage terminase large subunit BCQ_PT39 PF17288 Terminase RNAseH like domain BCQ_PT40 PF10668 Phage terminase small subunit BCQ_PT41 PF02796 Helix-turn-helix domain of resolvase BCQ_PT41 PF00239 Resolvase, N terminal domain BCQ_PT47 PF03838 Recombination protein U