locus-tag class description BF33_100 PF00437 Type II/IV secretion system protein BF33_1000 PF13419 Haloacid dehalogenase-like hydrolase BF33_1005 PF00005 ABC transporter BF33_1009 PF02887 Pyruvate kinase, alpha/beta domain BF33_1009 PF00224 Pyruvate kinase, barrel domain BF33_1009 PF00391 PEP-utilising enzyme, mobile domain BF33_1011 PF00881 Nitroreductase family BF33_1012 PF01638 HxlR-like helix-turn-helix BF33_1015 PF13393 Histidyl-tRNA synthetase BF33_1015 PF03129 Anticodon binding domain BF33_1016 PF04073 Aminoacyl-tRNA editing domain BF33_1017 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) BF33_1018 PF00293 NUDIX domain BF33_1019 PF01230 HIT domain BF33_1020 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) BF33_1023 PF00440 Bacterial regulatory proteins, tetR family BF33_1024 PF07690 Major Facilitator Superfamily BF33_1027 PF03606 C4-dicarboxylate anaerobic carrier BF33_1028 PF03737 Aldolase/RraA BF33_1031 PF02361 Cobalt transport protein BF33_1032 PF00005 ABC transporter BF33_1034 PF14256 YwiC-like protein BF33_1038 PF02525 Flavodoxin-like fold BF33_1040 PF02667 Short chain fatty acid transporter BF33_1041 PF01289 Thiol-activated cytolysin BF33_1041 PF17440 Thiol-activated cytolysin beta sandwich domain BF33_1042 PF00440 Bacterial regulatory proteins, tetR family BF33_1043 PF00893 Small Multidrug Resistance protein BF33_1044 PF17314 Family of unknown function (DUF5360) BF33_1046 PF07690 Major Facilitator Superfamily BF33_1047 PF01047 MarR family BF33_1048 PF12697 Alpha/beta hydrolase family BF33_1049 PF07690 Major Facilitator Superfamily BF33_1050 PF14044 NETI protein BF33_1057 PF01510 N-acetylmuramoyl-L-alanine amidase BF33_1057 PF01476 LysM domain BF33_1057 PF01471 Putative peptidoglycan binding domain BF33_1060 PF01804 Penicillin amidase BF33_1061 PF12833 Helix-turn-helix domain BF33_1061 PF01497 Periplasmic binding protein BF33_1062 PF07883 Cupin domain BF33_1065 PF08281 Sigma-70, region 4 BF33_1065 PF04542 Sigma-70 region 2 BF33_1068 PF00266 Aminotransferase class-V BF33_1069 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BF33_1069 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BF33_1069 PF01842 ACT domain BF33_1072 PF13520 Amino acid permease BF33_1073 PF01037 Lrp/AsnC ligand binding domain BF33_1074 PF00857 Isochorismatase family BF33_1075 PF00586 AIR synthase related protein, N-terminal domain BF33_1075 PF02769 AIR synthase related protein, C-terminal domain BF33_1076 PF07503 HypF finger BF33_1076 PF01300 Telomere recombination BF33_1076 PF17788 HypF Kae1-like domain BF33_1076 PF00708 Acylphosphatase BF33_1077 PF00202 Aminotransferase class-III BF33_1078 PF03315 Serine dehydratase beta chain BF33_1078 PF01842 ACT domain BF33_1079 PF03313 Serine dehydratase alpha chain BF33_1082 PF13302 Acetyltransferase (GNAT) domain BF33_1083 PF02743 Cache domain BF33_1083 PF00672 HAMP domain BF33_1083 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BF33_1086 PF11799 impB/mucB/samB family C-terminal domain BF33_1086 PF11798 IMS family HHH motif BF33_1086 PF00817 impB/mucB/samB family BF33_1090 PF18801 response regulator aspartate phosphatase H, N terminal BF33_1091 PF00356 Bacterial regulatory proteins, lacI family BF33_1092 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BF33_1093 PF05116 Sucrose-6F-phosphate phosphohydrolase BF33_1094 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BF33_1094 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BF33_1095 PF07690 Major Facilitator Superfamily BF33_1099 PF02016 LD-carboxypeptidase N-terminal domain BF33_1099 PF17676 LD-carboxypeptidase C-terminal domain BF33_11 PF01926 50S ribosome-binding GTPase BF33_1101 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BF33_1101 PF03466 LysR substrate binding domain BF33_1102 PF02754 Cysteine-rich domain BF33_1103 PF02589 LUD domain BF33_1103 PF13183 4Fe-4S dicluster domain BF33_1103 PF11870 Domain of unknown function (DUF3390) BF33_1104 PF02589 LUD domain BF33_1105 PF07690 Major Facilitator Superfamily BF33_1106 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BF33_1106 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BF33_1107 PF00072 Response regulator receiver domain BF33_1107 PF00486 Transcriptional regulatory protein, C terminal BF33_1108 PF00672 HAMP domain BF33_1108 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF33_1108 PF00512 His Kinase A (phospho-acceptor) domain BF33_1111 PF02687 FtsX-like permease family BF33_1112 PF00005 ABC transporter BF33_1115 PF04072 Leucine carboxyl methyltransferase BF33_1119 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BF33_1119 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BF33_1121 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family BF33_1122 PF00753 Metallo-beta-lactamase superfamily BF33_1125 PF00144 Beta-lactamase BF33_1127 PF00291 Pyridoxal-phosphate dependent enzyme BF33_1132 PF00512 His Kinase A (phospho-acceptor) domain BF33_1132 PF00672 HAMP domain BF33_1132 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF33_1133 PF00486 Transcriptional regulatory protein, C terminal BF33_1133 PF00072 Response regulator receiver domain BF33_1138 PF07690 Major Facilitator Superfamily BF33_1139 PF00258 Flavodoxin BF33_1139 PF00067 Cytochrome P450 BF33_1139 PF00175 Oxidoreductase NAD-binding domain BF33_1139 PF00667 FAD binding domain BF33_1140 PF12802 MarR family BF33_1143 PF13276 HTH-like domain BF33_1143 PF00665 Integrase core domain BF33_1143 PF13333 Integrase core domain BF33_1145 PF00144 Beta-lactamase BF33_1147 PF12833 Helix-turn-helix domain BF33_1147 PF02805 Metal binding domain of Ada BF33_1151 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BF33_1154 PF01037 Lrp/AsnC ligand binding domain BF33_1156 PF18665 Tetracyclin repressor-like, C-terminal domain BF33_1156 PF00440 Bacterial regulatory proteins, tetR family BF33_1157 PF07993 Male sterility protein BF33_1157 PF00550 Phosphopantetheine attachment site BF33_1158 PF00583 Acetyltransferase (GNAT) family BF33_1159 PF00486 Transcriptional regulatory protein, C terminal BF33_1159 PF00072 Response regulator receiver domain BF33_1160 PF00672 HAMP domain BF33_1160 PF00512 His Kinase A (phospho-acceptor) domain BF33_1160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF33_1161 PF04892 VanZ like family BF33_1164 PF01022 Bacterial regulatory protein, arsR family BF33_1165 PF01758 Sodium Bile acid symporter family BF33_1166 PF01451 Low molecular weight phosphotyrosine protein phosphatase BF33_1170 PF00005 ABC transporter BF33_1171 PF12996 DUF based on E. rectale Gene description (DUF3880) BF33_1172 PF00561 alpha/beta hydrolase fold BF33_1173 PF01040 UbiA prenyltransferase family BF33_1175 PF10057 Uncharacterized conserved protein (DUF2294) BF33_1176 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BF33_1176 PF00361 Proton-conducting membrane transporter BF33_1177 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) BF33_1179 PF03441 FAD binding domain of DNA photolyase BF33_1179 PF00875 DNA photolyase BF33_1180 PF03073 TspO/MBR family BF33_1183 PF11181 Heat induced stress protein YflT BF33_1186 PF01544 CorA-like Mg2+ transporter protein BF33_1187 PF01047 MarR family BF33_1188 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BF33_1188 PF03466 LysR substrate binding domain BF33_1189 PF01979 Amidohydrolase family BF33_1192 PF00857 Isochorismatase family BF33_1193 PF00561 alpha/beta hydrolase fold BF33_1194 PF00199 Catalase BF33_1194 PF06628 Catalase-related immune-responsive BF33_1195 PF17936 Bacterial Ig domain BF33_1195 PF00149 Calcineurin-like phosphoesterase BF33_1195 PF02872 5'-nucleotidase, C-terminal domain BF33_1197 PF01235 Sodium:alanine symporter family BF33_1198 PF04960 Glutaminase BF33_1199 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF33_12 PF08501 Shikimate dehydrogenase substrate binding domain BF33_12 PF18317 Shikimate 5'-dehydrogenase C-terminal domain BF33_12 PF01488 Shikimate / quinate 5-dehydrogenase BF33_1200 PF08664 YcbB domain BF33_1200 PF00072 Response regulator receiver domain BF33_1201 PF03323 Bacillus/Clostridium GerA spore germination protein BF33_1202 PF03845 Spore germination protein BF33_1203 PF05504 Spore germination B3/ GerAC like, C-terminal BF33_1205 PF13564 DoxX-like family BF33_1206 PF14748 Pyrroline-5-carboxylate reductase dimerisation BF33_1206 PF03807 NADP oxidoreductase coenzyme F420-dependent BF33_1207 PF05525 Branched-chain amino acid transport protein BF33_1208 PF13520 Amino acid permease BF33_1209 PF12826 Helix-hairpin-helix motif BF33_1209 PF02151 UvrB/uvrC motif BF33_1209 PF01541 GIY-YIG catalytic domain BF33_1209 PF08459 UvrC Helix-hairpin-helix N-terminal BF33_1211 PF01381 Helix-turn-helix BF33_1212 PF17763 Glutaminase/Asparaginase C-terminal domain BF33_1212 PF00710 Asparaginase, N-terminal BF33_1213 PF10415 Fumarase C C-terminus BF33_1213 PF00206 Lyase BF33_1215 PF00107 Zinc-binding dehydrogenase BF33_1215 PF13823 Alcohol dehydrogenase GroES-associated BF33_1215 PF08240 Alcohol dehydrogenase GroES-like domain BF33_1216 PF00269 Small, acid-soluble spore proteins, alpha/beta type BF33_1217 PF11553 Protein of unknown function (DUF3231) BF33_1218 PF10710 Protein of unknown function (DUF2512) BF33_1219 PF00269 Small, acid-soluble spore proteins, alpha/beta type BF33_1221 PF00324 Amino acid permease BF33_1222 PF01810 LysE type translocator BF33_1223 PF08892 YqcI/YcgG family BF33_1225 PF07875 Coat F domain BF33_1228 PF00753 Metallo-beta-lactamase superfamily BF33_1230 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain BF33_1230 PF00391 PEP-utilising enzyme, mobile domain BF33_1231 PF00440 Bacterial regulatory proteins, tetR family BF33_1233 PF02915 Rubrerythrin BF33_124 PF00437 Type II/IV secretion system protein BF33_1240 PF08028 Acyl-CoA dehydrogenase, C-terminal domain BF33_1240 PF02770 Acyl-CoA dehydrogenase, middle domain BF33_1240 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BF33_1243 PF07454 Stage II sporulation protein P (SpoIIP) BF33_1244 PF03932 CutC family BF33_1245 PF10502 Signal peptidase, peptidase S26 BF33_1246 PF09339 IclR helix-turn-helix domain BF33_1246 PF01614 Bacterial transcriptional regulator BF33_1247 PF02682 Carboxyltransferase domain, subdomain C and D BF33_1248 PF02626 Carboxyltransferase domain, subdomain A and B BF33_1249 PF03746 LamB/YcsF family BF33_125 PF00482 Type II secretion system (T2SS), protein F BF33_1253 PF01470 Pyroglutamyl peptidase BF33_1254 PF02146 Sir2 family BF33_1257 PF10502 Signal peptidase, peptidase S26 BF33_1259 PF00293 NUDIX domain BF33_1261 PF10898 Protein of unknown function (DUF2716) BF33_1262 PF08713 DNA alkylation repair enzyme BF33_1264 PF00324 Amino acid permease BF33_1265 PF13302 Acetyltransferase (GNAT) domain BF33_1266 PF01925 Sulfite exporter TauE/SafE BF33_127 PF07963 Prokaryotic N-terminal methylation motif BF33_1273 PF13031 Protein of unknown function (DUF3892) BF33_1274 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 BF33_1275 PF00392 Bacterial regulatory proteins, gntR family BF33_1275 PF00155 Aminotransferase class I and II BF33_1276 PF00892 EamA-like transporter family BF33_1279 PF00583 Acetyltransferase (GNAT) family BF33_1280 PF12833 Helix-turn-helix domain BF33_1285 PF00005 ABC transporter BF33_1287 PF00392 Bacterial regulatory proteins, gntR family BF33_1288 PF00005 ABC transporter BF33_1291 PF00293 NUDIX domain BF33_1293 PF07969 Amidohydrolase family BF33_1294 PF07690 Major Facilitator Superfamily BF33_1295 PF17853 GGDEF-like domain BF33_1295 PF13556 PucR C-terminal helix-turn-helix domain BF33_1295 PF07905 Purine catabolism regulatory protein-like family BF33_1297 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BF33_13 PF01985 CRS1 / YhbY (CRM) domain BF33_1300 PF02378 Phosphotransferase system, EIIC BF33_1301 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit BF33_1302 PF00232 Glycosyl hydrolase family 1 BF33_1303 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BF33_1303 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BF33_1304 PF00378 Enoyl-CoA hydratase/isomerase BF33_1305 PF00108 Thiolase, N-terminal domain BF33_1305 PF02803 Thiolase, C-terminal domain BF33_1306 PF13193 AMP-binding enzyme C-terminal domain BF33_1306 PF00501 AMP-binding enzyme BF33_1308 PF01494 FAD binding domain BF33_1310 PF01557 Fumarylacetoacetate (FAA) hydrolase family BF33_1312 PF07883 Cupin domain BF33_1313 PF03764 Elongation factor G, domain IV BF33_1313 PF00679 Elongation factor G C-terminus BF33_1313 PF14492 Elongation Factor G, domain II BF33_1313 PF00009 Elongation factor Tu GTP binding domain BF33_1314 PF01047 MarR family BF33_1315 PF00881 Nitroreductase family BF33_132 PF01202 Shikimate kinase BF33_1320 PF00144 Beta-lactamase BF33_1321 PF13382 Adenine deaminase C-terminal domain BF33_1321 PF01979 Amidohydrolase family BF33_1323 PF06628 Catalase-related immune-responsive BF33_1323 PF00199 Catalase BF33_1324 PF00202 Aminotransferase class-III BF33_1326 PF00535 Glycosyl transferase family 2 BF33_1327 PF00535 Glycosyl transferase family 2 BF33_133 PF14038 YqzE-like protein BF33_1330 PF00535 Glycosyl transferase family 2 BF33_1332 PF07690 Major Facilitator Superfamily BF33_1335 PF17863 AAA lid domain BF33_1335 PF07726 ATPase family associated with various cellular activities (AAA) BF33_1340 PF12681 Glyoxalase-like domain BF33_1341 PF13302 Acetyltransferase (GNAT) domain BF33_1343 PF04397 LytTr DNA-binding domain BF33_1343 PF00072 Response regulator receiver domain BF33_1345 PF10086 YhfC intramembrane metalloprotease BF33_1348 PF13443 Cro/C1-type HTH DNA-binding domain BF33_1349 PF11188 Protein of unknown function (DUF2975) BF33_1350 PF00245 Alkaline phosphatase BF33_1351 PF00487 Fatty acid desaturase BF33_1352 PF01139 tRNA-splicing ligase RtcB BF33_1353 PF00324 Amino acid permease BF33_1354 PF09339 IclR helix-turn-helix domain BF33_1354 PF01614 Bacterial transcriptional regulator BF33_1355 PF01546 Peptidase family M20/M25/M40 BF33_1358 PF00665 Integrase core domain BF33_1358 PF13276 HTH-like domain BF33_1358 PF13333 Integrase core domain BF33_1360 PF14748 Pyrroline-5-carboxylate reductase dimerisation BF33_1360 PF03807 NADP oxidoreductase coenzyme F420-dependent BF33_1361 PF00696 Amino acid kinase family BF33_1361 PF01472 PUA domain BF33_1362 PF00171 Aldehyde dehydrogenase family BF33_1363 PF07662 Na+ dependent nucleoside transporter C-terminus BF33_1363 PF01773 Na+ dependent nucleoside transporter N-terminus BF33_1367 PF03992 Antibiotic biosynthesis monooxygenase BF33_137 PF11079 Bacterial protein YqhG of unknown function BF33_1372 PF01791 DeoC/LacD family aldolase BF33_1374 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BF33_1374 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BF33_1375 PF04198 Putative sugar-binding domain BF33_1375 PF00325 Bacterial regulatory proteins, crp family BF33_1376 PF00005 ABC transporter BF33_1377 PF02653 Branched-chain amino acid transport system / permease component BF33_1378 PF02653 Branched-chain amino acid transport system / permease component BF33_1379 PF13407 Periplasmic binding protein domain BF33_138 PF00271 Helicase conserved C-terminal domain BF33_138 PF00176 SNF2 family N-terminal domain BF33_1380 PF06039 Malate:quinone oxidoreductase (Mqo) BF33_1383 PF00158 Sigma-54 interaction domain BF33_1383 PF02954 Bacterial regulatory protein, Fis family BF33_1383 PF00989 PAS fold BF33_1384 PF00501 AMP-binding enzyme BF33_1384 PF13193 AMP-binding enzyme C-terminal domain BF33_1385 PF00378 Enoyl-CoA hydratase/isomerase BF33_1388 PF01476 LysM domain BF33_1388 PF06725 3D domain BF33_139 PF01571 Aminomethyltransferase folate-binding domain BF33_139 PF08669 Glycine cleavage T-protein C-terminal barrel domain BF33_1391 PF01636 Phosphotransferase enzyme family BF33_1395 PF01817 Chorismate mutase type II BF33_1395 PF00793 DAHP synthetase I family BF33_1396 PF01264 Chorismate synthase BF33_1397 PF00155 Aminotransferase class I and II BF33_1398 PF02153 Prephenate dehydrogenase BF33_1398 PF01842 ACT domain BF33_1399 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BF33_14 PF01467 Cytidylyltransferase-like BF33_140 PF02347 Glycine cleavage system P-protein BF33_1401 PF00440 Bacterial regulatory proteins, tetR family BF33_1401 PF16295 Tetracyclin repressor-like, C-terminal domain BF33_1402 PF03176 MMPL family BF33_1404 PF00005 ABC transporter BF33_1404 PF12848 ABC transporter BF33_1405 PF00884 Sulfatase BF33_1406 PF03741 Integral membrane protein TerC family BF33_1408 PF01522 Polysaccharide deacetylase BF33_141 PF02347 Glycine cleavage system P-protein BF33_1410 PF08713 DNA alkylation repair enzyme BF33_1414 PF12867 DinB superfamily BF33_1415 PF13536 Putative multidrug resistance efflux transporter BF33_1420 PF02522 Aminoglycoside 3-N-acetyltransferase BF33_1428 PF00005 ABC transporter BF33_1429 PF09084 NMT1/THI5 like BF33_1430 PF00528 Binding-protein-dependent transport system inner membrane component BF33_1431 PF00296 Luciferase-like monooxygenase BF33_1433 PF01594 AI-2E family transporter BF33_144 PF00392 Bacterial regulatory proteins, gntR family BF33_1442 PF00005 ABC transporter BF33_1446 PF03630 Fumble BF33_1447 PF07977 FabA-like domain BF33_1448 PF00155 Aminotransferase class I and II BF33_145 PF00005 ABC transporter BF33_1455 PF08241 Methyltransferase domain BF33_1457 PF01156 Inosine-uridine preferring nucleoside hydrolase BF33_1458 PF04226 Transglycosylase associated protein BF33_1462 PF07690 Major Facilitator Superfamily BF33_1463 PF12793 Sugar transport-related sRNA regulator N-term BF33_1463 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BF33_1464 PF13171 Protein of unknown function (DUF4004) BF33_1465 PF04519 Polymer-forming cytoskeletal BF33_1467 PF07690 Major Facilitator Superfamily BF33_1471 PF02645 Uncharacterised protein, DegV family COG1307 BF33_1473 PF08439 Oligopeptidase F BF33_1473 PF01432 Peptidase family M3 BF33_1474 PF03808 Glycosyl transferase WecB/TagA/CpsF family BF33_1476 PF01048 Phosphorylase superfamily BF33_1480 PF00072 Response regulator receiver domain BF33_1480 PF00486 Transcriptional regulatory protein, C terminal BF33_1481 PF00512 His Kinase A (phospho-acceptor) domain BF33_1481 PF16736 Single Cache-like BF33_1481 PF00989 PAS fold BF33_1481 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF33_1482 PF02129 X-Pro dipeptidyl-peptidase (S15 family) BF33_1482 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain BF33_1489 PF13378 Enolase C-terminal domain-like BF33_1489 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BF33_1490 PF00877 NlpC/P60 family BF33_1490 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain BF33_1491 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BF33_1492 PF13673 Acetyltransferase (GNAT) domain BF33_1492 PF03352 Methyladenine glycosylase BF33_1492 PF00958 GMP synthase C terminal domain BF33_1492 PF00117 Glutamine amidotransferase class-I BF33_1492 PF13302 Acetyltransferase (GNAT) domain BF33_1493 PF04914 DltD protein BF33_1496 PF09335 SNARE associated Golgi protein BF33_1497 PF08876 Domain of unknown function (DUF1836) BF33_15 PF01966 HD domain BF33_1500 PF04324 BFD-like [2Fe-2S] binding domain BF33_1500 PF07992 Pyridine nucleotide-disulphide oxidoreductase BF33_1502 PF07992 Pyridine nucleotide-disulphide oxidoreductase BF33_1502 PF04324 BFD-like [2Fe-2S] binding domain BF33_1503 PF00158 Sigma-54 interaction domain BF33_1503 PF13188 PAS domain BF33_1503 PF02954 Bacterial regulatory protein, Fis family BF33_1504 PF01266 FAD dependent oxidoreductase BF33_1505 PF05544 Proline racemase BF33_1506 PF05544 Proline racemase BF33_1507 PF00701 Dihydrodipicolinate synthetase family BF33_1508 PF00171 Aldehyde dehydrogenase family BF33_1509 PF01235 Sodium:alanine symporter family BF33_1510 PF02627 Carboxymuconolactone decarboxylase family BF33_1512 PF18416 N-acetylglucosamine binding protein domain 2 BF33_1512 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading BF33_1513 PF01368 DHH family BF33_1513 PF02833 DHHA2 domain BF33_152 PF00893 Small Multidrug Resistance protein BF33_1521 PF16124 RecQ zinc-binding BF33_1521 PF09382 RQC domain BF33_1521 PF00570 HRDC domain BF33_1521 PF00270 DEAD/DEAH box helicase BF33_1521 PF00271 Helicase conserved C-terminal domain BF33_1522 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like BF33_1525 PF13538 UvrD-like helicase C-terminal domain BF33_153 PF00893 Small Multidrug Resistance protein BF33_1536 PF13567 Domain of unknown function (DUF4131) BF33_1536 PF03772 Competence protein BF33_1536 PF00753 Metallo-beta-lactamase superfamily BF33_1540 PF08241 Methyltransferase domain BF33_1541 PF10990 Protein of unknown function (DUF2809) BF33_1543 PF03781 Sulfatase-modifying factor enzyme 1 BF33_1544 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase BF33_1545 PF18416 N-acetylglucosamine binding protein domain 2 BF33_1545 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading BF33_1546 PF13673 Acetyltransferase (GNAT) domain BF33_1547 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) BF33_155 PF00356 Bacterial regulatory proteins, lacI family BF33_155 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BF33_1550 PF00574 Clp protease BF33_1551 PF04069 Substrate binding domain of ABC-type glycine betaine transport system BF33_1552 PF00571 CBS domain BF33_1552 PF00005 ABC transporter BF33_1553 PF00528 Binding-protein-dependent transport system inner membrane component BF33_156 PF00581 Rhodanese-like domain BF33_1561 PF13673 Acetyltransferase (GNAT) domain BF33_1561 PF04229 GrpB protein BF33_1562 PF00106 short chain dehydrogenase BF33_1564 PF00676 Dehydrogenase E1 component BF33_1565 PF02780 Transketolase, C-terminal domain BF33_1565 PF02779 Transketolase, pyrimidine binding domain BF33_1566 PF00364 Biotin-requiring enzyme BF33_1566 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BF33_1566 PF02817 e3 binding domain BF33_1567 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BF33_1567 PF07992 Pyridine nucleotide-disulphide oxidoreductase BF33_157 PF03099 Biotin/lipoate A/B protein ligase family BF33_1571 PF00455 DeoR C terminal sensor domain BF33_1571 PF08220 DeoR-like helix-turn-helix domain BF33_1572 PF13302 Acetyltransferase (GNAT) domain BF33_1575 PF01590 GAF domain BF33_1575 PF02954 Bacterial regulatory protein, Fis family BF33_1575 PF00158 Sigma-54 interaction domain BF33_1579 PF00440 Bacterial regulatory proteins, tetR family BF33_1579 PF08359 YsiA-like protein, C-terminal region BF33_1580 PF00266 Aminotransferase class-V BF33_1581 PF04199 Putative cyclase BF33_1582 PF03301 Tryptophan 2,3-dioxygenase BF33_1585 PF01471 Putative peptidoglycan binding domain BF33_1585 PF07486 Cell Wall Hydrolase BF33_1586 PF03413 Peptidase propeptide and YPEB domain BF33_1586 PF14620 YpeB sporulation BF33_1587 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) BF33_1590 PF06081 Aromatic acid exporter family member 1 BF33_1595 PF00561 alpha/beta hydrolase fold BF33_1596 PF00155 Aminotransferase class I and II BF33_1596 PF00392 Bacterial regulatory proteins, gntR family BF33_1597 PF00892 EamA-like transporter family BF33_1598 PF11638 DnaA N-terminal domain BF33_1598 PF08299 Bacterial dnaA protein helix-turn-helix BF33_1598 PF00308 Bacterial dnaA protein BF33_1599 PF00344 SecY translocase BF33_160 PF02742 Iron dependent repressor, metal binding and dimerisation domain BF33_160 PF01325 Iron dependent repressor, N-terminal DNA binding domain BF33_1603 PF07504 Fungalysin/Thermolysin Propeptide Motif BF33_1603 PF01447 Thermolysin metallopeptidase, catalytic domain BF33_1603 PF02868 Thermolysin metallopeptidase, alpha-helical domain BF33_1603 PF03413 Peptidase propeptide and YPEB domain BF33_1604 PF03714 Bacterial pullanase-associated domain BF33_1604 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BF33_1604 PF00128 Alpha amylase, catalytic domain BF33_1606 PF00501 AMP-binding enzyme BF33_1606 PF00550 Phosphopantetheine attachment site BF33_1606 PF00668 Condensation domain BF33_1606 PF13193 AMP-binding enzyme C-terminal domain BF33_1607 PF00282 Pyridoxal-dependent decarboxylase conserved domain BF33_1608 PF07859 alpha/beta hydrolase fold BF33_1617 PF01266 FAD dependent oxidoreductase BF33_162 PF13419 Haloacid dehalogenase-like hydrolase BF33_1625 PF01541 GIY-YIG catalytic domain BF33_1627 PF02673 Bacitracin resistance protein BacA BF33_163 PF07136 Protein of unknown function (DUF1385) BF33_1630 PF12867 DinB superfamily BF33_1632 PF08000 Bacterial PH domain BF33_1633 PF01734 Patatin-like phospholipase BF33_1637 PF09234 Domain of unknown function (DUF1963) BF33_164 PF11085 Conserved membrane protein YqhR BF33_1641 PF12706 Beta-lactamase superfamily domain BF33_1645 PF00293 NUDIX domain BF33_1646 PF02768 DNA polymerase III beta subunit, C-terminal domain BF33_1646 PF02767 DNA polymerase III beta subunit, central domain BF33_1646 PF00712 DNA polymerase III beta subunit, N-terminal domain BF33_1647 PF09297 NADH pyrophosphatase zinc ribbon domain BF33_1647 PF00293 NUDIX domain BF33_165 PF01220 Dehydroquinase class II BF33_1650 PF07690 Major Facilitator Superfamily BF33_1654 PF00293 NUDIX domain BF33_1657 PF01270 Glycosyl hydrolases family 8 BF33_1658 PF00892 EamA-like transporter family BF33_1659 PF00155 Aminotransferase class I and II BF33_1659 PF00392 Bacterial regulatory proteins, gntR family BF33_166 PF01321 Creatinase/Prolidase N-terminal domain BF33_166 PF00557 Metallopeptidase family M24 BF33_1662 PF03009 Glycerophosphoryl diester phosphodiesterase family BF33_1666 PF07690 Major Facilitator Superfamily BF33_1668 PF00144 Beta-lactamase BF33_167 PF09285 Elongation factor P, C-terminal BF33_167 PF08207 Elongation factor P (EF-P) KOW-like domain BF33_167 PF01132 Elongation factor P (EF-P) OB domain BF33_1671 PF01965 DJ-1/PfpI family BF33_1677 PF11954 Domain of unknown function (DUF3471) BF33_1677 PF00144 Beta-lactamase BF33_1680 PF01569 PAP2 superfamily BF33_1681 PF08240 Alcohol dehydrogenase GroES-like domain BF33_1681 PF00107 Zinc-binding dehydrogenase BF33_1684 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF33_1684 PF00512 His Kinase A (phospho-acceptor) domain BF33_1687 PF00005 ABC transporter BF33_1687 PF12558 ATP-binding cassette cobalt transporter BF33_1688 PF07155 ECF-type riboflavin transporter, S component BF33_1689 PF01177 Asp/Glu/Hydantoin racemase BF33_1690 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase BF33_1692 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF33_1692 PF00512 His Kinase A (phospho-acceptor) domain BF33_1692 PF00989 PAS fold BF33_1692 PF13188 PAS domain BF33_1692 PF13426 PAS domain BF33_1695 PF00067 Cytochrome P450 BF33_1697 PF07561 Domain of Unknown Function (DUF1540) BF33_1698 PF00132 Bacterial transferase hexapeptide (six repeats) BF33_17 PF13649 Methyltransferase domain BF33_1700 PF00067 Cytochrome P450 BF33_1709 PF01510 N-acetylmuramoyl-L-alanine amidase BF33_172 PF09548 Stage III sporulation protein AB (spore_III_AB) BF33_173 PF06686 Stage III sporulation protein AC/AD protein family BF33_1731 PF00589 Phage integrase family BF33_174 PF06686 Stage III sporulation protein AC/AD protein family BF33_1741 PF07883 Cupin domain BF33_175 PF09546 Stage III sporulation protein AE (spore_III_AE) BF33_1751 PF01695 IstB-like ATP binding protein BF33_1751 PF07319 Primosomal protein DnaI N-terminus BF33_176 PF09581 Stage III sporulation protein AF (Spore_III_AF) BF33_1761 PF14659 Phage integrase, N-terminal SAM-like domain BF33_1761 PF00589 Phage integrase family BF33_1769 PF03070 TENA/THI-4/PQQC family BF33_1770 PF01820 D-ala D-ala ligase N-terminus BF33_1770 PF07478 D-ala D-ala ligase C-terminus BF33_1771 PF00155 Aminotransferase class I and II BF33_1771 PF00392 Bacterial regulatory proteins, gntR family BF33_1772 PF01842 ACT domain BF33_1772 PF00742 Homoserine dehydrogenase BF33_1772 PF03447 Homoserine dehydrogenase, NAD binding domain BF33_1776 PF02687 FtsX-like permease family BF33_1777 PF00005 ABC transporter BF33_178 PF12685 SpoIIIAH-like protein BF33_1782 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF33_1783 PF00486 Transcriptional regulatory protein, C terminal BF33_1783 PF00072 Response regulator receiver domain BF33_1785 PF07486 Cell Wall Hydrolase BF33_1786 PF01921 tRNA synthetases class I (K) BF33_1788 PF08450 SMP-30/Gluconolactonase/LRE-like region BF33_1792 PF08240 Alcohol dehydrogenase GroES-like domain BF33_1792 PF00107 Zinc-binding dehydrogenase BF33_1795 PF00392 Bacterial regulatory proteins, gntR family BF33_1795 PF00155 Aminotransferase class I and II BF33_1798 PF12833 Helix-turn-helix domain BF33_1799 PF01636 Phosphotransferase enzyme family BF33_18 PF14748 Pyrroline-5-carboxylate reductase dimerisation BF33_18 PF03807 NADP oxidoreductase coenzyme F420-dependent BF33_180 PF00364 Biotin-requiring enzyme BF33_1803 PF07690 Major Facilitator Superfamily BF33_1804 PF00376 MerR family regulatory protein BF33_1804 PF09278 MerR, DNA binding BF33_1805 PF00144 Beta-lactamase BF33_181 PF00289 Biotin carboxylase, N-terminal domain BF33_181 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BF33_181 PF02785 Biotin carboxylase C-terminal domain BF33_1811 PF01447 Thermolysin metallopeptidase, catalytic domain BF33_1811 PF02868 Thermolysin metallopeptidase, alpha-helical domain BF33_1811 PF07504 Fungalysin/Thermolysin Propeptide Motif BF33_1811 PF03413 Peptidase propeptide and YPEB domain BF33_1815 PF01048 Phosphorylase superfamily BF33_1816 PF13021 Domain of unknown function (DUF3885) BF33_1817 PF01966 HD domain BF33_1818 PF00486 Transcriptional regulatory protein, C terminal BF33_1818 PF00072 Response regulator receiver domain BF33_1819 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF33_1819 PF00512 His Kinase A (phospho-acceptor) domain BF33_182 PF03780 Asp23 family, cell envelope-related function BF33_1820 PF00768 D-alanyl-D-alanine carboxypeptidase BF33_1820 PF07943 Penicillin-binding protein 5, C-terminal domain BF33_1821 PF05163 DinB family BF33_1823 PF00485 Phosphoribulokinase / Uridine kinase family BF33_1824 PF00583 Acetyltransferase (GNAT) family BF33_1826 PF00501 AMP-binding enzyme BF33_1826 PF16177 Acetyl-coenzyme A synthetase N-terminus BF33_1826 PF13193 AMP-binding enzyme C-terminal domain BF33_1827 PF01039 Carboxyl transferase domain BF33_1828 PF00378 Enoyl-CoA hydratase/isomerase BF33_1829 PF00682 HMGL-like BF33_183 PF01029 NusB family BF33_1830 PF00364 Biotin-requiring enzyme BF33_1831 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BF33_1831 PF00289 Biotin carboxylase, N-terminal domain BF33_1831 PF02785 Biotin carboxylase C-terminal domain BF33_1832 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BF33_1832 PF02770 Acyl-CoA dehydrogenase, middle domain BF33_1832 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BF33_1835 PF00440 Bacterial regulatory proteins, tetR family BF33_1835 PF08359 YsiA-like protein, C-terminal region BF33_1837 PF00005 ABC transporter BF33_184 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain BF33_184 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain BF33_1840 PF00581 Rhodanese-like domain BF33_1841 PF07992 Pyridine nucleotide-disulphide oxidoreductase BF33_1843 PF03707 Bacterial signalling protein N terminal repeat BF33_1843 PF00563 EAL domain BF33_1843 PF00990 Diguanylate cyclase, GGDEF domain BF33_1845 PF00440 Bacterial regulatory proteins, tetR family BF33_1846 PF07968 Leukocidin/Hemolysin toxin family BF33_1847 PF01520 N-acetylmuramoyl-L-alanine amidase BF33_1847 PF00395 S-layer homology domain BF33_1849 PF02557 D-alanyl-D-alanine carboxypeptidase BF33_185 PF02601 Exonuclease VII, large subunit BF33_185 PF13742 OB-fold nucleic acid binding domain BF33_1852 PF01381 Helix-turn-helix BF33_1853 PF18801 response regulator aspartate phosphatase H, N terminal BF33_1855 PF02872 5'-nucleotidase, C-terminal domain BF33_1855 PF00149 Calcineurin-like phosphoesterase BF33_1858 PF04962 KduI/IolB family BF33_1859 PF01116 Fructose-bisphosphate aldolase class-II BF33_186 PF02609 Exonuclease VII small subunit BF33_1860 PF01261 Xylose isomerase-like TIM barrel BF33_1861 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BF33_1861 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BF33_1861 PF00205 Thiamine pyrophosphate enzyme, central domain BF33_1862 PF00171 Aldehyde dehydrogenase family BF33_1863 PF00294 pfkB family carbohydrate kinase BF33_1864 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BF33_1864 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BF33_1865 PF07690 Major Facilitator Superfamily BF33_1866 PF00356 Bacterial regulatory proteins, lacI family BF33_1867 PF01569 PAP2 superfamily BF33_187 PF00348 Polyprenyl synthetase BF33_1872 PF04542 Sigma-70 region 2 BF33_1872 PF08281 Sigma-70, region 4 BF33_1875 PF01546 Peptidase family M20/M25/M40 BF33_1875 PF07687 Peptidase dimerisation domain BF33_188 PF02779 Transketolase, pyrimidine binding domain BF33_188 PF02780 Transketolase, C-terminal domain BF33_188 PF13292 1-deoxy-D-xylulose-5-phosphate synthase BF33_1880 PF14171 Toxin SpoIISA, type II toxin-antitoxin system BF33_1881 PF00300 Histidine phosphatase superfamily (branch 1) BF33_1882 PF12802 MarR family BF33_1883 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BF33_1883 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BF33_1883 PF00205 Thiamine pyrophosphate enzyme, central domain BF33_1884 PF08241 Methyltransferase domain BF33_1886 PF03848 Tellurite resistance protein TehB BF33_1886 PF09313 Domain of unknown function (DUF1971) BF33_1887 PF02687 FtsX-like permease family BF33_1887 PF00005 ABC transporter BF33_1887 PF12704 MacB-like periplasmic core domain BF33_189 PF01479 S4 domain BF33_189 PF01728 FtsJ-like methyltransferase BF33_1890 PF00440 Bacterial regulatory proteins, tetR family BF33_1890 PF17932 Tetracyclin repressor-like, C-terminal domain BF33_1893 PF00270 DEAD/DEAH box helicase BF33_1893 PF00271 Helicase conserved C-terminal domain BF33_1896 PF16123 Hydroxyacylglutathione hydrolase C-terminus BF33_1896 PF00753 Metallo-beta-lactamase superfamily BF33_19 PF10531 SLBB domain BF33_190 PF01316 Arginine repressor, DNA binding domain BF33_190 PF02863 Arginine repressor, C-terminal domain BF33_1900 PF00291 Pyridoxal-phosphate dependent enzyme BF33_1901 PF00266 Aminotransferase class-V BF33_1902 PF02660 Glycerol-3-phosphate acyltransferase BF33_1903 PF01869 BadF/BadG/BcrA/BcrD ATPase family BF33_1904 PF03702 Anhydro-N-acetylmuramic acid kinase BF33_1906 PF02378 Phosphotransferase system, EIIC BF33_1908 PF02638 Glycosyl hydrolase-like 10 BF33_191 PF13476 AAA domain BF33_1913 PF12680 SnoaL-like domain BF33_1913 PF04542 Sigma-70 region 2 BF33_1913 PF08281 Sigma-70, region 4 BF33_1914 PF00890 FAD binding domain BF33_1916 PF13291 ACT domain BF33_1916 PF04607 Region found in RelA / SpoT proteins BF33_1916 PF02824 TGS domain BF33_192 PF05580 SpoIVB peptidase S55 BF33_192 PF17820 PDZ domain BF33_1923 PF07883 Cupin domain BF33_1923 PF01381 Helix-turn-helix BF33_1924 PF01810 LysE type translocator BF33_1927 PF00005 ABC transporter BF33_1927 PF00664 ABC transporter transmembrane region BF33_1928 PF00005 ABC transporter BF33_1928 PF00664 ABC transporter transmembrane region BF33_193 PF08769 Sporulation initiation factor Spo0A C terminal BF33_193 PF00072 Response regulator receiver domain BF33_1931 PF03475 3-alpha domain BF33_1931 PF03473 MOSC domain BF33_1932 PF03466 LysR substrate binding domain BF33_1932 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BF33_1935 PF01118 Semialdehyde dehydrogenase, NAD binding domain BF33_1935 PF02774 Semialdehyde dehydrogenase, dimerisation domain BF33_1936 PF03466 LysR substrate binding domain BF33_1936 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BF33_1947 PF00313 'Cold-shock' DNA-binding domain BF33_1949 PF13302 Acetyltransferase (GNAT) domain BF33_195 PF14174 YycC-like protein BF33_1957 PF00583 Acetyltransferase (GNAT) family BF33_196 PF03009 Glycerophosphoryl diester phosphodiesterase family BF33_1960 PF00302 Chloramphenicol acetyltransferase BF33_1962 PF03176 MMPL family BF33_1964 PF00753 Metallo-beta-lactamase superfamily BF33_1964 PF16123 Hydroxyacylglutathione hydrolase C-terminus BF33_1971 PF13649 Methyltransferase domain BF33_1975 PF12146 Serine aminopeptidase, S33 BF33_1977 PF00005 ABC transporter BF33_1978 PF02824 TGS domain BF33_1978 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BF33_1978 PF03129 Anticodon binding domain BF33_1978 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BF33_1979 PF01479 S4 domain BF33_1979 PF00849 RNA pseudouridylate synthase BF33_198 PF00989 PAS fold BF33_198 PF00158 Sigma-54 interaction domain BF33_198 PF02954 Bacterial regulatory protein, Fis family BF33_1980 PF16291 Domain of unknown function (DUF4937 BF33_1983 PF01235 Sodium:alanine symporter family BF33_1984 PF00082 Subtilase family BF33_1985 PF05163 DinB family BF33_1987 PF00216 Bacterial DNA-binding protein BF33_199 PF01515 Phosphate acetyl/butaryl transferase BF33_1990 PF07690 Major Facilitator Superfamily BF33_1991 PF03621 MbtH-like protein BF33_1992 PF00550 Phosphopantetheine attachment site BF33_1992 PF00668 Condensation domain BF33_1992 PF13193 AMP-binding enzyme C-terminal domain BF33_1992 PF00975 Thioesterase domain BF33_1992 PF00501 AMP-binding enzyme BF33_1993 PF00857 Isochorismatase family BF33_1993 PF00550 Phosphopantetheine attachment site BF33_1994 PF00501 AMP-binding enzyme BF33_1994 PF13193 AMP-binding enzyme C-terminal domain BF33_1995 PF00425 chorismate binding enzyme BF33_1996 PF00106 short chain dehydrogenase BF33_1997 PF07690 Major Facilitator Superfamily BF33_1999 PF01022 Bacterial regulatory protein, arsR family BF33_2 PF04607 Region found in RelA / SpoT proteins BF33_20 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BF33_200 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BF33_200 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BF33_2001 PF13476 AAA domain BF33_2002 PF12320 Type 5 capsule protein repressor C-terminal domain BF33_2002 PF00149 Calcineurin-like phosphoesterase BF33_2003 PF10763 Protein of unknown function (DUF2584) BF33_2005 PF00378 Enoyl-CoA hydratase/isomerase BF33_2006 PF01810 LysE type translocator BF33_2007 PF00171 Aldehyde dehydrogenase family BF33_2008 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BF33_2008 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BF33_2009 PF02770 Acyl-CoA dehydrogenase, middle domain BF33_2009 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BF33_2009 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BF33_201 PF00871 Acetokinase family BF33_2011 PF03972 MmgE/PrpD family BF33_2012 PF00285 Citrate synthase, C-terminal domain BF33_2013 PF01521 Iron-sulphur cluster biosynthesis BF33_2014 PF07690 Major Facilitator Superfamily BF33_2015 PF00905 Penicillin binding protein transpeptidase domain BF33_2015 PF00912 Transglycosylase BF33_2019 PF10676 Spore germination protein gerPA/gerPF BF33_202 PF07992 Pyridine nucleotide-disulphide oxidoreductase BF33_202 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BF33_203 PF00676 Dehydrogenase E1 component BF33_2039 PF04471 Restriction endonuclease BF33_204 PF02779 Transketolase, pyrimidine binding domain BF33_204 PF02780 Transketolase, C-terminal domain BF33_2042 PF03424 Carbohydrate binding domain (family 17/28) BF33_2042 PF00395 S-layer homology domain BF33_2042 PF00150 Cellulase (glycosyl hydrolase family 5) BF33_2043 PF14436 Bacterial EndoU nuclease BF33_2043 PF04740 LXG domain of WXG superfamily BF33_2045 PF00085 Thioredoxin BF33_2046 PF01569 PAP2 superfamily BF33_2047 PF16916 Dimerisation domain of Zinc Transporter BF33_2047 PF01545 Cation efflux family BF33_2048 PF07070 SpoOM protein BF33_205 PF02817 e3 binding domain BF33_205 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BF33_205 PF00364 Biotin-requiring enzyme BF33_2051 PF14162 YozD-like protein BF33_2054 PF06855 YozE SAM-like fold BF33_2055 PF14122 YokU-like protein, putative antitoxin BF33_2056 PF12544 Lysine-2,3-aminomutase BF33_2057 PF02954 Bacterial regulatory protein, Fis family BF33_2057 PF13426 PAS domain BF33_2057 PF00158 Sigma-54 interaction domain BF33_2058 PF00583 Acetyltransferase (GNAT) family BF33_2059 PF07687 Peptidase dimerisation domain BF33_2059 PF01546 Peptidase family M20/M25/M40 BF33_206 PF01098 Cell cycle protein BF33_2060 PF01144 Coenzyme A transferase BF33_2061 PF01144 Coenzyme A transferase BF33_2062 PF00202 Aminotransferase class-III BF33_2064 PF09385 Histidine kinase N terminal BF33_2065 PF07997 Protein of unknown function (DUF1694) BF33_2066 PF00171 Aldehyde dehydrogenase family BF33_2067 PF01595 Cyclin M transmembrane N-terminal domain BF33_2067 PF03471 Transporter associated domain BF33_2067 PF00571 CBS domain BF33_207 PF00293 NUDIX domain BF33_207 PF09297 NADH pyrophosphatase zinc ribbon domain BF33_2073 PF13520 Amino acid permease BF33_2074 PF00528 Binding-protein-dependent transport system inner membrane component BF33_2075 PF00571 CBS domain BF33_2075 PF00005 ABC transporter BF33_2078 PF03358 NADPH-dependent FMN reductase BF33_208 PF11208 Protein of unknown function (DUF2992) BF33_2081 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BF33_2081 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BF33_2082 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BF33_2082 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BF33_2084 PF00144 Beta-lactamase BF33_2087 PF00107 Zinc-binding dehydrogenase BF33_2087 PF08240 Alcohol dehydrogenase GroES-like domain BF33_2088 PF01418 Helix-turn-helix domain, rpiR family BF33_2088 PF01380 SIS domain BF33_209 PF06491 Disulphide isomerase BF33_2090 PF00072 Response regulator receiver domain BF33_2090 PF00196 Bacterial regulatory proteins, luxR family BF33_2091 PF13185 GAF domain BF33_2091 PF07730 Histidine kinase BF33_2092 PF00924 Mechanosensitive ion channel BF33_2093 PF00011 Hsp20/alpha crystallin family BF33_2094 PF00293 NUDIX domain BF33_2095 PF00857 Isochorismatase family BF33_2098 PF00881 Nitroreductase family BF33_2099 PF01063 Amino-transferase class IV BF33_21 PF03772 Competence protein BF33_21 PF13567 Domain of unknown function (DUF4131) BF33_21 PF00753 Metallo-beta-lactamase superfamily BF33_210 PF00497 Bacterial extracellular solute-binding proteins, family 3 BF33_2100 PF01497 Periplasmic binding protein BF33_2104 PF00733 Asparagine synthase BF33_2104 PF13537 Glutamine amidotransferase domain BF33_2105 PF00011 Hsp20/alpha crystallin family BF33_2106 PF02630 SCO1/SenC BF33_2108 PF02645 Uncharacterised protein, DegV family COG1307 BF33_211 PF00528 Binding-protein-dependent transport system inner membrane component BF33_2110 PF00902 Sec-independent protein translocase protein (TatC) BF33_2111 PF02416 mttA/Hcf106 family BF33_2112 PF03006 Haemolysin-III related BF33_2113 PF01553 Acyltransferase BF33_2114 PF02525 Flavodoxin-like fold BF33_2115 PF03717 Penicillin-binding Protein dimerisation domain BF33_2115 PF00905 Penicillin binding protein transpeptidase domain BF33_2115 PF05223 NTF2-like N-terminal transpeptidase domain BF33_2116 PF00186 Dihydrofolate reductase BF33_2117 PF00303 Thymidylate synthase BF33_2118 PF07930 D-aminopeptidase, domain B BF33_2118 PF00144 Beta-lactamase BF33_212 PF00005 ABC transporter BF33_2121 PF13419 Haloacid dehalogenase-like hydrolase BF33_2122 PF14005 YpjP-like protein BF33_2123 PF05975 Bacterial ABC transporter protein EcsB BF33_2124 PF00005 ABC transporter BF33_2127 PF00583 Acetyltransferase (GNAT) family BF33_2128 PF01980 tRNA-methyltransferase O BF33_2129 PF01177 Asp/Glu/Hydantoin racemase BF33_213 PF06081 Aromatic acid exporter family member 1 BF33_213 PF11728 Putative aromatic acid exporter C-terminal domain BF33_2130 PF00465 Iron-containing alcohol dehydrogenase BF33_2132 PF13419 Haloacid dehalogenase-like hydrolase BF33_2133 PF10997 Alternate to MurJ BF33_2136 PF00209 Sodium:neurotransmitter symporter family BF33_2139 PF00512 His Kinase A (phospho-acceptor) domain BF33_2139 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF33_2139 PF00672 HAMP domain BF33_214 PF03734 L,D-transpeptidase catalytic domain BF33_2140 PF00486 Transcriptional regulatory protein, C terminal BF33_2140 PF00072 Response regulator receiver domain BF33_2141 PF00939 Sodium:sulfate symporter transmembrane region BF33_2142 PF02595 Glycerate kinase family BF33_2153 PF01580 FtsK/SpoIIIE family BF33_2153 PF12538 DNA transporter BF33_2157 PF01336 OB-fold nucleic acid binding domain BF33_2157 PF00152 tRNA synthetases class II (D, K and N) BF33_2158 PF08245 Mur ligase middle domain BF33_2158 PF01225 Mur ligase family, catalytic domain BF33_2158 PF02875 Mur ligase family, glutamate ligase domain BF33_216 PF13302 Acetyltransferase (GNAT) domain BF33_2161 PF08264 Anticodon-binding domain of tRNA BF33_2161 PF00133 tRNA synthetases class I (I, L, M and V) BF33_2165 PF05746 DALR anticodon binding domain BF33_2165 PF00750 tRNA synthetases class I (R) BF33_2165 PF03485 Arginyl tRNA synthetase N terminal domain BF33_2166 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) BF33_2166 PF01348 Type II intron maturase BF33_2168 PF06491 Disulphide isomerase BF33_217 PF01546 Peptidase family M20/M25/M40 BF33_217 PF07687 Peptidase dimerisation domain BF33_2170 PF13769 Virulence factor BF33_2170 PF08712 Scaffold protein Nfu/NifU N terminal BF33_2171 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) BF33_2172 PF00436 Single-strand binding protein family BF33_2175 PF00005 ABC transporter BF33_2175 PF16326 ABC transporter C-terminal domain BF33_2175 PF12848 ABC transporter BF33_2176 PF01966 HD domain BF33_2180 PF04232 Stage V sporulation protein S (SpoVS) BF33_2187 PF04405 Domain of Unknown function (DUF542) BF33_2187 PF01814 Hemerythrin HHE cation binding domain BF33_2188 PF18267 Rubredoxin NAD+ reductase C-terminal domain BF33_2188 PF07992 Pyridine nucleotide-disulphide oxidoreductase BF33_2188 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BF33_2188 PF04324 BFD-like [2Fe-2S] binding domain BF33_2188 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BF33_2189 PF00355 Rieske [2Fe-2S] domain BF33_219 PF11799 impB/mucB/samB family C-terminal domain BF33_219 PF00817 impB/mucB/samB family BF33_219 PF11798 IMS family HHH motif BF33_2190 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BF33_2191 PF01903 CbiX BF33_2194 PF07690 Major Facilitator Superfamily BF33_2196 PF02391 MoaE protein BF33_2197 PF03454 MoeA C-terminal region (domain IV) BF33_2197 PF00994 Probable molybdopterin binding domain BF33_2197 PF03453 MoeA N-terminal region (domain I and II) BF33_2198 PF00899 ThiF family BF33_2199 PF04055 Radical SAM superfamily BF33_2199 PF06463 Molybdenum Cofactor Synthesis C BF33_22 PF14141 YqzM-like protein BF33_2200 PF00027 Cyclic nucleotide-binding domain BF33_2200 PF00325 Bacterial regulatory proteins, crp family BF33_2203 PF00857 Isochorismatase family BF33_2204 PF02566 OsmC-like protein BF33_2205 PF01521 Iron-sulphur cluster biosynthesis BF33_2206 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BF33_2206 PF07992 Pyridine nucleotide-disulphide oxidoreductase BF33_2207 PF00085 Thioredoxin BF33_2208 PF02082 Transcriptional regulator BF33_221 PF12706 Beta-lactamase superfamily domain BF33_221 PF00753 Metallo-beta-lactamase superfamily BF33_2210 PF02665 Nitrate reductase gamma subunit BF33_2211 PF02613 Nitrate reductase delta subunit BF33_2212 PF13247 4Fe-4S dicluster domain BF33_2212 PF14711 Respiratory nitrate reductase beta C-terminal BF33_2213 PF14710 Respiratory nitrate reductase alpha N-terminal BF33_2213 PF00384 Molybdopterin oxidoreductase BF33_2213 PF01568 Molydopterin dinucleotide binding domain BF33_2214 PF07726 ATPase family associated with various cellular activities (AAA) BF33_2214 PF17863 AAA lid domain BF33_2215 PF01882 Protein of unknown function DUF58 BF33_2216 PF01841 Transglutaminase-like superfamily BF33_2216 PF13559 Domain of unknown function (DUF4129) BF33_2216 PF11992 Domain of unknown function (DUF3488) BF33_2217 PF00255 Glutathione peroxidase BF33_222 PF03315 Serine dehydratase beta chain BF33_222 PF01842 ACT domain BF33_2221 PF03109 ABC1 family BF33_2223 PF04542 Sigma-70 region 2 BF33_2223 PF08281 Sigma-70, region 4 BF33_2224 PF00107 Zinc-binding dehydrogenase BF33_2224 PF08240 Alcohol dehydrogenase GroES-like domain BF33_2226 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BF33_2227 PF01261 Xylose isomerase-like TIM barrel BF33_2228 PF00270 DEAD/DEAH box helicase BF33_2228 PF00271 Helicase conserved C-terminal domain BF33_223 PF03313 Serine dehydratase alpha chain BF33_2230 PF01268 Formate--tetrahydrofolate ligase BF33_2231 PF01209 ubiE/COQ5 methyltransferase family BF33_2236 PF09579 Sporulation protein YtfJ (Spore_YtfJ) BF33_2238 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) BF33_224 PF14748 Pyrroline-5-carboxylate reductase dimerisation BF33_224 PF03807 NADP oxidoreductase coenzyme F420-dependent BF33_225 PF00753 Metallo-beta-lactamase superfamily BF33_2250 PF00583 Acetyltransferase (GNAT) family BF33_2256 PF00392 Bacterial regulatory proteins, gntR family BF33_2256 PF00155 Aminotransferase class I and II BF33_2257 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BF33_2257 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BF33_2258 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase BF33_226 PF00106 short chain dehydrogenase BF33_2262 PF00842 Alanine racemase, C-terminal domain BF33_2262 PF01168 Alanine racemase, N-terminal domain BF33_2265 PF00300 Histidine phosphatase superfamily (branch 1) BF33_2266 PF01145 SPFH domain / Band 7 family BF33_2268 PF07690 Major Facilitator Superfamily BF33_2269 PF01425 Amidase BF33_2271 PF02557 D-alanyl-D-alanine carboxypeptidase BF33_2273 PF07454 Stage II sporulation protein P (SpoIIP) BF33_2277 PF01588 Putative tRNA binding domain BF33_2278 PF05525 Branched-chain amino acid transport protein BF33_228 PF01118 Semialdehyde dehydrogenase, NAD binding domain BF33_228 PF02774 Semialdehyde dehydrogenase, dimerisation domain BF33_2281 PF01595 Cyclin M transmembrane N-terminal domain BF33_2281 PF03471 Transporter associated domain BF33_2281 PF00571 CBS domain BF33_2282 PF04306 Protein of unknown function (DUF456) BF33_2283 PF13460 NAD(P)H-binding BF33_2286 PF13396 Phospholipase_D-nuclease N-terminal BF33_2286 PF13091 PLD-like domain BF33_2287 PF03061 Thioesterase superfamily BF33_2288 PF09323 Domain of unknown function (DUF1980) BF33_2289 PF03773 Predicted permease BF33_229 PF01960 ArgJ family BF33_2291 PF14667 Polysaccharide biosynthesis C-terminal domain BF33_2291 PF01943 Polysaccharide biosynthesis protein BF33_2292 PF09335 SNARE associated Golgi protein BF33_2293 PF00293 NUDIX domain BF33_2294 PF08757 CotH kinase protein BF33_2296 PF00300 Histidine phosphatase superfamily (branch 1) BF33_2298 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BF33_2299 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BF33_23 PF06144 DNA polymerase III, delta subunit BF33_230 PF00696 Amino acid kinase family BF33_2301 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BF33_2301 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain BF33_2302 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BF33_2303 PF13460 NAD(P)H-binding BF33_2305 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment BF33_2305 PF01297 Zinc-uptake complex component A periplasmic BF33_231 PF00202 Aminotransferase class-III BF33_2316 PF00583 Acetyltransferase (GNAT) family BF33_2317 PF07683 Cobalamin synthesis protein cobW C-terminal domain BF33_2317 PF02492 CobW/HypB/UreG, nucleotide-binding domain BF33_2318 PF00248 Aldo/keto reductase family BF33_232 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BF33_232 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BF33_2320 PF01593 Flavin containing amine oxidoreductase BF33_2322 PF00296 Luciferase-like monooxygenase BF33_2325 PF00210 Ferritin-like domain BF33_2329 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BF33_2329 PF02743 Cache domain BF33_2329 PF00672 HAMP domain BF33_2330 PF03193 RsgA GTPase BF33_2334 PF07690 Major Facilitator Superfamily BF33_2335 PF00248 Aldo/keto reductase family BF33_2336 PF01022 Bacterial regulatory protein, arsR family BF33_2337 PF00082 Subtilase family BF33_2338 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin BF33_2338 PF18277 AbrB C-terminal domain BF33_2339 PF02687 FtsX-like permease family BF33_2340 PF02540 NAD synthase BF33_2341 PF13344 Haloacid dehalogenase-like hydrolase BF33_2341 PF00293 NUDIX domain BF33_2346 PF01734 Patatin-like phospholipase BF33_2348 PF01810 LysE type translocator BF33_2349 PF07690 Major Facilitator Superfamily BF33_235 PF01037 Lrp/AsnC ligand binding domain BF33_235 PF13404 AsnC-type helix-turn-helix domain BF33_2350 PF00269 Small, acid-soluble spore proteins, alpha/beta type BF33_2351 PF01261 Xylose isomerase-like TIM barrel BF33_2354 PF00501 AMP-binding enzyme BF33_2354 PF13193 AMP-binding enzyme C-terminal domain BF33_2355 PF04183 IucA / IucC family BF33_2355 PF06276 Ferric iron reductase FhuF-like transporter BF33_2356 PF04183 IucA / IucC family BF33_2356 PF06276 Ferric iron reductase FhuF-like transporter BF33_2357 PF00583 Acetyltransferase (GNAT) family BF33_2358 PF02308 MgtC family BF33_2360 PF01522 Polysaccharide deacetylase BF33_2361 PF16736 Single Cache-like BF33_2361 PF00989 PAS fold BF33_2361 PF00512 His Kinase A (phospho-acceptor) domain BF33_2361 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF33_2362 PF00072 Response regulator receiver domain BF33_2362 PF00486 Transcriptional regulatory protein, C terminal BF33_2364 PF03816 Cell envelope-related transcriptional attenuator domain BF33_2367 PF00288 GHMP kinases N terminal domain BF33_2367 PF08544 GHMP kinases C terminal BF33_2368 PF00291 Pyridoxal-phosphate dependent enzyme BF33_2369 PF03447 Homoserine dehydrogenase, NAD binding domain BF33_2369 PF00742 Homoserine dehydrogenase BF33_2369 PF01842 ACT domain BF33_237 PF00149 Calcineurin-like phosphoesterase BF33_237 PF02872 5'-nucleotidase, C-terminal domain BF33_2372 PF13630 SdpI/YhfL protein family BF33_2373 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain BF33_2373 PF01522 Polysaccharide deacetylase BF33_2374 PF04439 Streptomycin adenylyltransferase BF33_2375 PF00106 short chain dehydrogenase BF33_2377 PF00512 His Kinase A (phospho-acceptor) domain BF33_2377 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF33_2377 PF16736 Single Cache-like BF33_2377 PF00989 PAS fold BF33_2378 PF00072 Response regulator receiver domain BF33_2378 PF00486 Transcriptional regulatory protein, C terminal BF33_2379 PF00005 ABC transporter BF33_2379 PF00664 ABC transporter transmembrane region BF33_2381 PF01476 LysM domain BF33_2381 PF00877 NlpC/P60 family BF33_2383 PF00768 D-alanyl-D-alanine carboxypeptidase BF33_2383 PF07943 Penicillin-binding protein 5, C-terminal domain BF33_2384 PF02016 LD-carboxypeptidase N-terminal domain BF33_2384 PF17676 LD-carboxypeptidase C-terminal domain BF33_2387 PF00664 ABC transporter transmembrane region BF33_2387 PF00005 ABC transporter BF33_2388 PF00005 ABC transporter BF33_2388 PF00664 ABC transporter transmembrane region BF33_2389 PF02322 Cytochrome bd terminal oxidase subunit II BF33_2390 PF01654 Cytochrome bd terminal oxidase subunit I BF33_2392 PF01047 MarR family BF33_2394 PF14552 Tautomerase enzyme BF33_2396 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BF33_2396 PF03466 LysR substrate binding domain BF33_2398 PF02653 Branched-chain amino acid transport system / permease component BF33_2399 PF00005 ABC transporter BF33_24 PF01649 Ribosomal protein S20 BF33_240 PF00202 Aminotransferase class-III BF33_2400 PF00005 ABC transporter BF33_2400 PF12399 Branched-chain amino acid ATP-binding cassette transporter BF33_2402 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BF33_2402 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BF33_2403 PF01575 MaoC like domain BF33_2404 PF13193 AMP-binding enzyme C-terminal domain BF33_2404 PF00501 AMP-binding enzyme BF33_2407 PF02492 CobW/HypB/UreG, nucleotide-binding domain BF33_2407 PF07683 Cobalamin synthesis protein cobW C-terminal domain BF33_2408 PF01593 Flavin containing amine oxidoreductase BF33_2409 PF00056 lactate/malate dehydrogenase, NAD binding domain BF33_2409 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BF33_2410 PF01594 AI-2E family transporter BF33_2411 PF01425 Amidase BF33_2414 PF00881 Nitroreductase family BF33_2415 PF01323 DSBA-like thioredoxin domain BF33_2416 PF02082 Transcriptional regulator BF33_2417 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BF33_2417 PF03466 LysR substrate binding domain BF33_2418 PF00892 EamA-like transporter family BF33_2419 PF07987 Domain of unkown function (DUF1775) BF33_242 PF00155 Aminotransferase class I and II BF33_2420 PF13115 YtkA-like BF33_2420 PF04234 CopC domain BF33_2420 PF05425 Copper resistance protein D BF33_2422 PF05525 Branched-chain amino acid transport protein BF33_2423 PF02525 Flavodoxin-like fold BF33_2428 PF01551 Peptidase family M23 BF33_2429 PF07731 Multicopper oxidase BF33_2429 PF00394 Multicopper oxidase BF33_2429 PF07732 Multicopper oxidase BF33_243 PF12697 Alpha/beta hydrolase family BF33_243 PF08241 Methyltransferase domain BF33_2430 PF05195 Aminopeptidase P, N-terminal domain BF33_2430 PF00557 Metallopeptidase family M24 BF33_2434 PF05979 Bacterial protein of unknown function (DUF896) BF33_2435 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BF33_2436 PF00591 Glycosyl transferase family, a/b domain BF33_2436 PF02885 Glycosyl transferase family, helical bundle domain BF33_2436 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain BF33_2437 PF01773 Na+ dependent nucleoside transporter N-terminus BF33_2437 PF07662 Na+ dependent nucleoside transporter C-terminus BF33_2438 PF01791 DeoC/LacD family aldolase BF33_2439 PF04198 Putative sugar-binding domain BF33_244 PF13847 Methyltransferase domain BF33_2441 PF05791 Bacillus haemolytic enterotoxin (HBL) BF33_2442 PF05791 Bacillus haemolytic enterotoxin (HBL) BF33_2444 PF13520 Amino acid permease BF33_2446 PF02558 Ketopantoate reductase PanE/ApbA BF33_2446 PF08546 Ketopantoate reductase PanE/ApbA C terminal BF33_2449 PF01566 Natural resistance-associated macrophage protein BF33_245 PF06968 Biotin and Thiamin Synthesis associated domain BF33_245 PF04055 Radical SAM superfamily BF33_2451 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF33_2451 PF00512 His Kinase A (phospho-acceptor) domain BF33_2452 PF00072 Response regulator receiver domain BF33_2452 PF00486 Transcriptional regulatory protein, C terminal BF33_2453 PF13302 Acetyltransferase (GNAT) domain BF33_2454 PF13186 Iron-sulfur cluster-binding domain BF33_2454 PF04055 Radical SAM superfamily BF33_2458 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BF33_2459 PF01979 Amidohydrolase family BF33_2462 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain BF33_2462 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain BF33_2463 PF04397 LytTr DNA-binding domain BF33_2463 PF00072 Response regulator receiver domain BF33_2465 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase BF33_2466 PF07690 Major Facilitator Superfamily BF33_2469 PF09587 Bacterial capsule synthesis protein PGA_cap BF33_247 PF00885 6,7-dimethyl-8-ribityllumazine synthase BF33_2471 PF00585 C-terminal regulatory domain of Threonine dehydratase BF33_2471 PF00291 Pyridoxal-phosphate dependent enzyme BF33_2472 PF00920 Dehydratase family BF33_2473 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain BF33_2473 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain BF33_2474 PF10369 Small subunit of acetolactate synthase BF33_2475 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BF33_2475 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BF33_2475 PF00205 Thiamine pyrophosphate enzyme, central domain BF33_2476 PF01063 Amino-transferase class IV BF33_2478 PF01625 Peptide methionine sulfoxide reductase BF33_248 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase BF33_248 PF00925 GTP cyclohydrolase II BF33_2482 PF04239 Protein of unknown function (DUF421) BF33_2484 PF00457 Glycosyl hydrolases family 11 BF33_2484 PF03422 Carbohydrate binding module (family 6) BF33_2484 PF01522 Polysaccharide deacetylase BF33_2485 PF00209 Sodium:neurotransmitter symporter family BF33_2486 PF01943 Polysaccharide biosynthesis protein BF33_2486 PF14667 Polysaccharide biosynthesis C-terminal domain BF33_2489 PF00291 Pyridoxal-phosphate dependent enzyme BF33_249 PF00677 Lumazine binding domain BF33_2490 PF07690 Major Facilitator Superfamily BF33_2491 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BF33_2492 PF13167 GTP-binding GTPase N-terminal BF33_2492 PF01926 50S ribosome-binding GTPase BF33_2492 PF16360 GTP-binding GTPase Middle Region BF33_2494 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BF33_2494 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BF33_2495 PF07690 Major Facilitator Superfamily BF33_2496 PF03976 Polyphosphate kinase 2 (PPK2) BF33_2497 PF02554 Carbon starvation protein CstA BF33_25 PF03418 Germination protease BF33_250 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BF33_250 PF01872 RibD C-terminal domain BF33_2500 PF07690 Major Facilitator Superfamily BF33_2502 PF00395 S-layer homology domain BF33_2502 PF13205 Bacterial Ig-like domain BF33_2502 PF02368 Bacterial Ig-like domain (group 2) BF33_2503 PF00293 NUDIX domain BF33_2504 PF14158 YndJ-like protein BF33_2505 PF13761 Domain of unknown function (DUF4166) BF33_2507 PF13840 ACT domain BF33_2507 PF00696 Amino acid kinase family BF33_2511 PF03590 Aspartate-ammonia ligase BF33_2513 PF04434 SWIM zinc finger BF33_2513 PF00176 SNF2 family N-terminal domain BF33_2513 PF00271 Helicase conserved C-terminal domain BF33_2514 PF08664 YcbB domain BF33_2514 PF00072 Response regulator receiver domain BF33_2515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF33_2516 PF00390 Malic enzyme, N-terminal domain BF33_2516 PF03949 Malic enzyme, NAD binding domain BF33_2517 PF00206 Lyase BF33_2517 PF10415 Fumarase C C-terminus BF33_2518 PF00375 Sodium:dicarboxylate symporter family BF33_2519 PF00696 Amino acid kinase family BF33_252 PF10827 Protein of unknown function (DUF2552) BF33_2520 PF13091 PLD-like domain BF33_2523 PF00005 ABC transporter BF33_2524 PF13185 GAF domain BF33_2524 PF07730 Histidine kinase BF33_2524 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF33_2524 PF13492 GAF domain BF33_2525 PF00072 Response regulator receiver domain BF33_2525 PF00196 Bacterial regulatory proteins, luxR family BF33_253 PF12146 Serine aminopeptidase, S33 BF33_2530 PF04286 Protein of unknown function (DUF445) BF33_2531 PF00291 Pyridoxal-phosphate dependent enzyme BF33_2535 PF00578 AhpC/TSA family BF33_2536 PF02683 Cytochrome C biogenesis protein transmembrane region BF33_254 PF00583 Acetyltransferase (GNAT) family BF33_2540 PF03575 Peptidase family S51 BF33_2541 PF01554 MatE BF33_2545 PF10415 Fumarase C C-terminus BF33_2545 PF00206 Lyase BF33_2547 PF13411 MerR HTH family regulatory protein BF33_2548 PF03553 Na+/H+ antiporter family BF33_2549 PF00535 Glycosyl transferase family 2 BF33_255 PF00356 Bacterial regulatory proteins, lacI family BF33_2551 PF03773 Predicted permease BF33_2552 PF02492 CobW/HypB/UreG, nucleotide-binding domain BF33_2552 PF07683 Cobalamin synthesis protein cobW C-terminal domain BF33_2553 PF00892 EamA-like transporter family BF33_2554 PF00392 Bacterial regulatory proteins, gntR family BF33_2554 PF07729 FCD domain BF33_2556 PF16916 Dimerisation domain of Zinc Transporter BF33_2556 PF01545 Cation efflux family BF33_256 PF13726 Na+-H+ antiporter family BF33_256 PF03553 Na+/H+ antiporter family BF33_2560 PF00733 Asparagine synthase BF33_2560 PF13537 Glutamine amidotransferase domain BF33_2562 PF01047 MarR family BF33_2566 PF00300 Histidine phosphatase superfamily (branch 1) BF33_2568 PF07943 Penicillin-binding protein 5, C-terminal domain BF33_2568 PF00768 D-alanyl-D-alanine carboxypeptidase BF33_257 PF12146 Serine aminopeptidase, S33 BF33_2571 PF10787 Uncharacterised protein from bacillus cereus group BF33_2573 PF12706 Beta-lactamase superfamily domain BF33_2573 PF00753 Metallo-beta-lactamase superfamily BF33_2574 PF00528 Binding-protein-dependent transport system inner membrane component BF33_2576 PF08402 TOBE domain BF33_2576 PF00005 ABC transporter BF33_2581 PF08141 Small acid-soluble spore protein H family BF33_2582 PF03992 Antibiotic biosynthesis monooxygenase BF33_2589 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BF33_2589 PF01411 tRNA synthetases class II (A) BF33_2589 PF02272 DHHA1 domain BF33_259 PF00565 Staphylococcal nuclease homologue BF33_259 PF00149 Calcineurin-like phosphoesterase BF33_259 PF00746 LPXTG cell wall anchor motif BF33_259 PF02872 5'-nucleotidase, C-terminal domain BF33_2590 PF00460 Flagella basal body rod protein BF33_2590 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BF33_2591 PF00448 SRP54-type protein, GTPase domain BF33_2592 PF00771 FHIPEP family BF33_2593 PF01312 FlhB HrpN YscU SpaS Family BF33_2595 PF01313 Bacterial export proteins, family 3 BF33_2596 PF00813 FliP family BF33_2598 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BF33_2598 PF04509 CheC-like family BF33_2599 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BF33_2599 PF02154 Flagellar motor switch protein FliM BF33_2601 PF01464 Transglycosylase SLT domain BF33_2602 PF00669 Bacterial flagellin N-terminal helical region BF33_2602 PF00700 Bacterial flagellin C-terminal helical region BF33_2603 PF00669 Bacterial flagellin N-terminal helical region BF33_2603 PF00700 Bacterial flagellin C-terminal helical region BF33_2604 PF12181 DNA binding domain of the motility gene repressor (MogR) BF33_2605 PF01584 CheW-like domain BF33_2605 PF00072 Response regulator receiver domain BF33_2608 PF07559 Flagellar basal body protein FlaE BF33_2608 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BF33_2608 PF00460 Flagella basal body rod protein BF33_261 PF13673 Acetyltransferase (GNAT) domain BF33_261 PF04229 GrpB protein BF33_2612 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BF33_2612 PF02874 ATP synthase alpha/beta family, beta-barrel domain BF33_2612 PF18269 T3SS EscN ATPase C-terminal domain BF33_2614 PF01706 FliG C-terminal domain BF33_2614 PF14841 FliG middle domain BF33_2614 PF14842 FliG N-terminal domain BF33_2615 PF01514 Secretory protein of YscJ/FliF family BF33_2615 PF08345 Flagellar M-ring protein C-terminal BF33_2616 PF02049 Flagellar hook-basal body complex protein FliE BF33_2617 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BF33_2617 PF00460 Flagella basal body rod protein BF33_2618 PF00460 Flagella basal body rod protein BF33_262 PF00248 Aldo/keto reductase family BF33_2621 PF02465 Flagellar hook-associated protein 2 N-terminus BF33_2621 PF07196 Flagellin hook IN motif BF33_2621 PF07195 Flagellar hook-associated protein 2 C-terminus BF33_2622 PF00700 Bacterial flagellin C-terminal helical region BF33_2622 PF00669 Bacterial flagellin N-terminal helical region BF33_2623 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BF33_2623 PF00460 Flagella basal body rod protein BF33_2627 PF01739 CheR methyltransferase, SAM binding domain BF33_2627 PF03705 CheR methyltransferase, all-alpha domain BF33_263 PF00248 Aldo/keto reductase family BF33_2630 PF04509 CheC-like family BF33_2630 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BF33_2631 PF02895 Signal transducing histidine kinase, homodimeric domain BF33_2631 PF01627 Hpt domain BF33_2631 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF33_2631 PF07194 P2 response regulator binding domain BF33_2631 PF01584 CheW-like domain BF33_2632 PF01627 Hpt domain BF33_2632 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF33_2632 PF02895 Signal transducing histidine kinase, homodimeric domain BF33_2632 PF01584 CheW-like domain BF33_2632 PF07194 P2 response regulator binding domain BF33_2633 PF00072 Response regulator receiver domain BF33_2634 PF13677 Membrane MotB of proton-channel complex MotA/MotB BF33_2634 PF00691 OmpA family BF33_2635 PF01618 MotA/TolQ/ExbB proton channel family BF33_2637 PF17209 Hfq protein BF33_264 PF13072 Mother cell inhibitor of FtsZ BF33_2646 PF00881 Nitroreductase family BF33_2648 PF02698 DUF218 domain BF33_2649 PF04239 Protein of unknown function (DUF421) BF33_265 PF00293 NUDIX domain BF33_2651 PF13411 MerR HTH family regulatory protein BF33_2651 PF06445 GyrI-like small molecule binding domain BF33_2652 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain BF33_2652 PF00753 Metallo-beta-lactamase superfamily BF33_2652 PF17770 Ribonuclease J C-terminal domain BF33_2653 PF00999 Sodium/hydrogen exchanger family BF33_2655 PF00202 Aminotransferase class-III BF33_2656 PF00474 Sodium:solute symporter family BF33_2657 PF04341 Protein of unknown function, DUF485 BF33_2660 PF01810 LysE type translocator BF33_2661 PF08892 YqcI/YcgG family BF33_2662 PF00313 'Cold-shock' DNA-binding domain BF33_2667 PF01263 Aldose 1-epimerase BF33_2668 PF13456 Reverse transcriptase-like BF33_267 PF01944 Stage II sporulation protein M BF33_2672 PF13673 Acetyltransferase (GNAT) domain BF33_2672 PF18014 Acetyltransferase (GNAT) domain BF33_2675 PF13439 Glycosyltransferase Family 4 BF33_2675 PF00534 Glycosyl transferases group 1 BF33_2676 PF00535 Glycosyl transferase family 2 BF33_2679 PF02397 Bacterial sugar transferase BF33_268 PF01475 Ferric uptake regulator family BF33_2684 PF01367 5'-3' exonuclease, C-terminal SAM fold BF33_2684 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BF33_2685 PF00690 Cation transporter/ATPase, N-terminus BF33_2685 PF00689 Cation transporting ATPase, C-terminus BF33_2687 PF03738 Glutathionylspermidine synthase preATP-grasp BF33_269 PF14004 Protein of unknown function (DUF4227) BF33_2690 PF00581 Rhodanese-like domain BF33_2691 PF10752 Protein of unknown function (DUF2533) BF33_2692 PF00583 Acetyltransferase (GNAT) family BF33_2694 PF00350 Dynamin family BF33_2696 PF04235 Protein of unknown function (DUF418) BF33_2697 PF00860 Permease family BF33_2698 PF00156 Phosphoribosyl transferase domain BF33_2699 PF00557 Metallopeptidase family M24 BF33_27 PF03144 Elongation factor Tu domain 2 BF33_27 PF00679 Elongation factor G C-terminus BF33_27 PF00009 Elongation factor Tu GTP binding domain BF33_27 PF06421 GTP-binding protein LepA C-terminus BF33_270 PF00589 Phage integrase family BF33_270 PF02899 Phage integrase, N-terminal SAM-like domain BF33_2700 PF01636 Phosphotransferase enzyme family BF33_2702 PF02074 Carboxypeptidase Taq (M32) metallopeptidase BF33_2703 PF13307 Helicase C-terminal domain BF33_2705 PF01170 Putative RNA methylase family UPF0020 BF33_2705 PF02926 THUMP domain BF33_2706 PF05103 DivIVA protein BF33_2707 PF06908 YspA SLOG family BF33_2714 PF10720 Protein of unknown function (DUF2515) BF33_2715 PF03838 Recombination protein U BF33_2716 PF00905 Penicillin binding protein transpeptidase domain BF33_2716 PF00912 Transglycosylase BF33_2718 PF00633 Helix-hairpin-helix motif BF33_2718 PF10576 Iron-sulfur binding domain of endonuclease III BF33_2718 PF00730 HhH-GPD superfamily base excision DNA repair protein BF33_2719 PF07261 Replication initiation and membrane attachment BF33_272 PF01676 Metalloenzyme superfamily BF33_2720 PF00155 Aminotransferase class I and II BF33_2722 PF14084 Protein of unknown function (DUF4264) BF33_2723 PF00929 Exonuclease BF33_2723 PF04851 Type III restriction enzyme, res subunit BF33_2723 PF13307 Helicase C-terminal domain BF33_2724 PF02261 Aspartate decarboxylase BF33_2725 PF02569 Pantoate-beta-alanine ligase BF33_2726 PF02548 Ketopantoate hydroxymethyltransferase BF33_2728 PF08279 HTH domain BF33_2728 PF02237 Biotin protein ligase C terminal domain BF33_2728 PF03099 Biotin/lipoate A/B protein ligase family BF33_2729 PF12627 Probable RNA and SrmB- binding site of polymerase A BF33_2729 PF13735 tRNA nucleotidyltransferase domain 2 putative BF33_2729 PF01743 Poly A polymerase head domain BF33_273 PF01048 Phosphorylase superfamily BF33_2730 PF13439 Glycosyltransferase Family 4 BF33_2730 PF00534 Glycosyl transferases group 1 BF33_2731 PF02585 GlcNAc-PI de-N-acetylase BF33_2732 PF02142 MGS-like domain BF33_2733 PF01113 Dihydrodipicolinate reductase, N-terminus BF33_2733 PF05173 Dihydrodipicolinate reductase, C-terminus BF33_2734 PF03819 MazG nucleotide pyrophosphohydrolase domain BF33_2735 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BF33_2735 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BF33_2737 PF04298 Putative neutral zinc metallopeptidase BF33_2738 PF09577 Sporulation protein YpjB (SpoYpjB) BF33_274 PF02885 Glycosyl transferase family, helical bundle domain BF33_274 PF00591 Glycosyl transferase family, a/b domain BF33_274 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain BF33_2740 PF07187 Protein of unknown function (DUF1405) BF33_2741 PF00032 Cytochrome b(C-terminal)/b6/petD BF33_2741 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BF33_2742 PF00033 Cytochrome b/b6/petB BF33_2743 PF00355 Rieske [2Fe-2S] domain BF33_2744 PF10673 Protein of unknown function (DUF2487) BF33_2745 PF08864 UPF0302 domain BF33_2745 PF08858 IDEAL domain BF33_2747 PF00155 Aminotransferase class I and II BF33_2748 PF01761 3-dehydroquinate synthase BF33_2749 PF01264 Chorismate synthase BF33_275 PF01544 CorA-like Mg2+ transporter protein BF33_2750 PF00334 Nucleoside diphosphate kinase BF33_2751 PF00348 Polyprenyl synthetase BF33_2752 PF01209 ubiE/COQ5 methyltransferase family BF33_2753 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 BF33_2754 PF01227 GTP cyclohydrolase I BF33_2755 PF00216 Bacterial DNA-binding protein BF33_2756 PF09547 Stage IV sporulation protein A (spore_IV_A) BF33_2758 PF10966 Protein of unknown function (DUF2768) BF33_276 PF00860 Permease family BF33_2760 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus BF33_2760 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus BF33_2761 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal BF33_2761 PF01926 50S ribosome-binding GTPase BF33_2763 PF14045 YIEGIA protein BF33_2765 PF14140 YpzI-like protein BF33_2766 PF01070 FMN-dependent dehydrogenase BF33_2767 PF00575 S1 RNA binding domain BF33_2768 PF02224 Cytidylate kinase BF33_2770 PF17763 Glutaminase/Asparaginase C-terminal domain BF33_2770 PF00710 Asparaginase, N-terminal BF33_2775 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BF33_2775 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BF33_2776 PF05389 Negative regulator of genetic competence (MecA) BF33_2777 PF02310 B12 binding domain BF33_2777 PF02607 B12 binding domain BF33_2777 PF13411 MerR HTH family regulatory protein BF33_2778 PF00149 Calcineurin-like phosphoesterase BF33_278 PF01047 MarR family BF33_2780 PF02517 CPBP intramembrane metalloprotease BF33_2781 PF00270 DEAD/DEAH box helicase BF33_2781 PF00271 Helicase conserved C-terminal domain BF33_2784 PF12822 ECF transporter, substrate-specific component BF33_2786 PF01551 Peptidase family M23 BF33_2787 PF01923 Cobalamin adenosyltransferase BF33_2788 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF33_2788 PF00512 His Kinase A (phospho-acceptor) domain BF33_2788 PF00989 PAS fold BF33_2788 PF00672 HAMP domain BF33_2788 PF18698 Histidine kinase sensor domain BF33_2789 PF00486 Transcriptional regulatory protein, C terminal BF33_2789 PF00072 Response regulator receiver domain BF33_2790 PF01578 Cytochrome C assembly protein BF33_2791 PF05140 ResB-like family BF33_2792 PF00578 AhpC/TSA family BF33_2793 PF01479 S4 domain BF33_2793 PF00849 RNA pseudouridylate synthase BF33_2794 PF07670 Nucleoside recognition BF33_2795 PF07670 Nucleoside recognition BF33_2796 PF07943 Penicillin-binding protein 5, C-terminal domain BF33_2796 PF00768 D-alanyl-D-alanine carboxypeptidase BF33_2797 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BF33_2797 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BF33_28 PF01638 HxlR-like helix-turn-helix BF33_2800 PF09924 Uncharacterised conserved protein (DUF2156) BF33_2800 PF03706 Lysylphosphatidylglycerol synthase TM region BF33_2803 PF01048 Phosphorylase superfamily BF33_2804 PF00512 His Kinase A (phospho-acceptor) domain BF33_2804 PF16736 Single Cache-like BF33_2804 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF33_2804 PF00989 PAS fold BF33_2805 PF00589 Phage integrase family BF33_2807 PF01904 Protein of unknown function DUF72 BF33_2808 PF00989 PAS fold BF33_2808 PF00512 His Kinase A (phospho-acceptor) domain BF33_2808 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF33_281 PF00005 ABC transporter BF33_2811 PF00912 Transglycosylase BF33_2811 PF00905 Penicillin binding protein transpeptidase domain BF33_2812 PF01865 Protein of unknown function DUF47 BF33_2813 PF01384 Phosphate transporter family BF33_2814 PF01925 Sulfite exporter TauE/SafE BF33_2817 PF00970 Oxidoreductase FAD-binding domain BF33_2817 PF00042 Globin BF33_2817 PF00175 Oxidoreductase NAD-binding domain BF33_282 PF00392 Bacterial regulatory proteins, gntR family BF33_2822 PF08241 Methyltransferase domain BF33_2824 PF05525 Branched-chain amino acid transport protein BF33_2826 PF00072 Response regulator receiver domain BF33_2826 PF00196 Bacterial regulatory proteins, luxR family BF33_2827 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF33_2827 PF07730 Histidine kinase BF33_2827 PF00672 HAMP domain BF33_2828 PF09922 Cell wall-active antibiotics response 4TMS YvqF BF33_283 PF07943 Penicillin-binding protein 5, C-terminal domain BF33_283 PF00768 D-alanyl-D-alanine carboxypeptidase BF33_2831 PF03553 Na+/H+ antiporter family BF33_2833 PF00375 Sodium:dicarboxylate symporter family BF33_2835 PF00209 Sodium:neurotransmitter symporter family BF33_2837 PF01903 CbiX BF33_2838 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BF33_284 PF01740 STAS domain BF33_2840 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BF33_2840 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BF33_2842 PF01747 ATP-sulfurylase BF33_2842 PF14306 PUA-like domain BF33_2843 PF01507 Phosphoadenosine phosphosulfate reductase family BF33_2845 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain BF33_2845 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BF33_2847 PF00884 Sulfatase BF33_2848 PF01066 CDP-alcohol phosphatidyltransferase BF33_2849 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BF33_2849 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BF33_285 PF13581 Histidine kinase-like ATPase domain BF33_2851 PF02811 PHP domain BF33_2852 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase BF33_2853 PF01502 Phosphoribosyl-AMP cyclohydrolase BF33_2854 PF00977 Histidine biosynthesis protein BF33_2855 PF00977 Histidine biosynthesis protein BF33_2856 PF00117 Glutamine amidotransferase class-I BF33_2857 PF00475 Imidazoleglycerol-phosphate dehydratase BF33_2858 PF00815 Histidinol dehydrogenase BF33_2859 PF01634 ATP phosphoribosyltransferase BF33_286 PF04545 Sigma-70, region 4 BF33_286 PF04542 Sigma-70 region 2 BF33_286 PF04539 Sigma-70 region 3 BF33_2860 PF13393 Histidyl-tRNA synthetase BF33_2861 PF00694 Aconitase C-terminal domain BF33_2862 PF00330 Aconitase family (aconitate hydratase) BF33_2863 PF00180 Isocitrate/isopropylmalate dehydrogenase BF33_2864 PF08502 LeuA allosteric (dimerisation) domain BF33_2864 PF00682 HMGL-like BF33_2865 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain BF33_2865 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain BF33_2866 PF01842 ACT domain BF33_2866 PF10369 Small subunit of acetolactate synthase BF33_2867 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BF33_2867 PF00205 Thiamine pyrophosphate enzyme, central domain BF33_2867 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BF33_2868 PF01063 Amino-transferase class IV BF33_287 PF00209 Sodium:neurotransmitter symporter family BF33_2870 PF03698 Uncharacterised protein family (UPF0180) BF33_2872 PF09579 Sporulation protein YtfJ (Spore_YtfJ) BF33_2874 PF02386 Cation transport protein BF33_2875 PF00375 Sodium:dicarboxylate symporter family BF33_2877 PF01047 MarR family BF33_2880 PF02673 Bacitracin resistance protein BacA BF33_2881 PF01554 MatE BF33_2885 PF01636 Phosphotransferase enzyme family BF33_2888 PF00258 Flavodoxin BF33_289 PF12164 Stage V sporulation protein AA BF33_2890 PF01546 Peptidase family M20/M25/M40 BF33_2890 PF07687 Peptidase dimerisation domain BF33_2892 PF00501 AMP-binding enzyme BF33_2892 PF13193 AMP-binding enzyme C-terminal domain BF33_2893 PF03062 MBOAT, membrane-bound O-acyltransferase family BF33_2894 PF00550 Phosphopantetheine attachment site BF33_2895 PF04914 DltD protein BF33_2896 PF03060 Nitronate monooxygenase BF33_2897 PF02016 LD-carboxypeptidase N-terminal domain BF33_2897 PF17676 LD-carboxypeptidase C-terminal domain BF33_2899 PF00857 Isochorismatase family BF33_29 PF04055 Radical SAM superfamily BF33_29 PF06969 HemN C-terminal domain BF33_290 PF13782 Stage V sporulation protein AB BF33_2901 PF01037 Lrp/AsnC ligand binding domain BF33_2903 PF02517 CPBP intramembrane metalloprotease BF33_2905 PF00005 ABC transporter BF33_2907 PF00005 ABC transporter BF33_2908 PF00392 Bacterial regulatory proteins, gntR family BF33_2909 PF00268 Ribonucleotide reductase, small chain BF33_291 PF03862 SpoVAC/SpoVAEB sporulation membrane protein BF33_2910 PF08343 Ribonucleotide reductase N-terminal BF33_2910 PF00317 Ribonucleotide reductase, all-alpha domain BF33_2910 PF02867 Ribonucleotide reductase, barrel domain BF33_2912 PF02867 Ribonucleotide reductase, barrel domain BF33_2912 PF00317 Ribonucleotide reductase, all-alpha domain BF33_2912 PF08343 Ribonucleotide reductase N-terminal BF33_2913 PF07972 NrdI Flavodoxin like BF33_2919 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) BF33_292 PF07451 Stage V sporulation protein AD (SpoVAD) BF33_2920 PF14489 QueF-like protein BF33_2921 PF04055 Radical SAM superfamily BF33_2922 PF01242 6-pyruvoyl tetrahydropterin synthase BF33_2923 PF06508 Queuosine biosynthesis protein QueC BF33_2924 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF33_2924 PF00512 His Kinase A (phospho-acceptor) domain BF33_2924 PF00989 PAS fold BF33_2924 PF13188 PAS domain BF33_2924 PF13426 PAS domain BF33_2926 PF12867 DinB superfamily BF33_2928 PF01047 MarR family BF33_2929 PF02743 Cache domain BF33_2929 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF33_2929 PF00512 His Kinase A (phospho-acceptor) domain BF33_293 PF03862 SpoVAC/SpoVAEB sporulation membrane protein BF33_2930 PF09388 Spo0E like sporulation regulatory protein BF33_2931 PF04748 Divergent polysaccharide deacetylase BF33_2933 PF00596 Class II Aldolase and Adducin N-terminal domain BF33_2934 PF00395 S-layer homology domain BF33_2934 PF01520 N-acetylmuramoyl-L-alanine amidase BF33_2936 PF08220 DeoR-like helix-turn-helix domain BF33_2936 PF00455 DeoR C terminal sensor domain BF33_2938 PF00266 Aminotransferase class-V BF33_2939 PF13419 Haloacid dehalogenase-like hydrolase BF33_294 PF14097 Stage V sporulation protein AE1 BF33_2940 PF00528 Binding-protein-dependent transport system inner membrane component BF33_2941 PF00005 ABC transporter BF33_2941 PF08402 TOBE domain BF33_2945 PF02386 Cation transport protein BF33_2947 PF00561 alpha/beta hydrolase fold BF33_295 PF03323 Bacillus/Clostridium GerA spore germination protein BF33_2952 PF01575 MaoC like domain BF33_2953 PF00269 Small, acid-soluble spore proteins, alpha/beta type BF33_2954 PF02386 Cation transport protein BF33_2955 PF03741 Integral membrane protein TerC family BF33_2956 PF01226 Formate/nitrite transporter BF33_2958 PF01478 Type IV leader peptidase family BF33_2958 PF06750 Bacterial Peptidase A24 N-terminal domain BF33_2959 PF02589 LUD domain BF33_2960 PF02589 LUD domain BF33_2960 PF13183 4Fe-4S dicluster domain BF33_2960 PF11870 Domain of unknown function (DUF3390) BF33_2961 PF02754 Cysteine-rich domain BF33_2962 PF00392 Bacterial regulatory proteins, gntR family BF33_2962 PF07729 FCD domain BF33_2963 PF00672 HAMP domain BF33_2963 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF33_2963 PF18698 Histidine kinase sensor domain BF33_2963 PF00512 His Kinase A (phospho-acceptor) domain BF33_2963 PF00989 PAS fold BF33_2964 PF00072 Response regulator receiver domain BF33_2964 PF00486 Transcriptional regulatory protein, C terminal BF33_2966 PF05651 Putative sugar diacid recognition BF33_2966 PF17853 GGDEF-like domain BF33_2966 PF13556 PucR C-terminal helix-turn-helix domain BF33_2967 PF02913 FAD linked oxidases, C-terminal domain BF33_2967 PF01565 FAD binding domain BF33_2968 PF02754 Cysteine-rich domain BF33_2968 PF13183 4Fe-4S dicluster domain BF33_2969 PF00188 Cysteine-rich secretory protein family BF33_297 PF06207 Protein of unknown function (DUF1002) BF33_2971 PF00849 RNA pseudouridylate synthase BF33_2971 PF01479 S4 domain BF33_2973 PF03176 MMPL family BF33_2975 PF13416 Bacterial extracellular solute-binding protein BF33_2976 PF00528 Binding-protein-dependent transport system inner membrane component BF33_2977 PF00528 Binding-protein-dependent transport system inner membrane component BF33_2978 PF08402 TOBE domain BF33_2978 PF00005 ABC transporter BF33_2979 PF00171 Aldehyde dehydrogenase family BF33_298 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BF33_2980 PF05547 Immune inhibitor A peptidase M6 BF33_2981 PF08671 Anti-repressor SinI BF33_2981 PF01381 Helix-turn-helix BF33_2982 PF12389 Camelysin metallo-endopeptidase BF33_2984 PF12389 Camelysin metallo-endopeptidase BF33_2986 PF00768 D-alanyl-D-alanine carboxypeptidase BF33_2986 PF07943 Penicillin-binding protein 5, C-terminal domain BF33_2988 PF13649 Methyltransferase domain BF33_299 PF00583 Acetyltransferase (GNAT) family BF33_2991 PF02899 Phage integrase, N-terminal SAM-like domain BF33_2991 PF00589 Phage integrase family BF33_2995 PF04860 Phage portal protein BF33_2999 PF13392 HNH endonuclease BF33_3 PF00881 Nitroreductase family BF33_30 PF01628 HrcA protein C terminal domain BF33_300 PF03745 Domain of unknown function (DUF309) BF33_302 PF02616 Segregation and condensation protein ScpA BF33_3022 PF01381 Helix-turn-helix BF33_3023 PF00676 Dehydrogenase E1 component BF33_3023 PF16870 2-oxoglutarate dehydrogenase C-terminal BF33_3023 PF02779 Transketolase, pyrimidine binding domain BF33_3024 PF00364 Biotin-requiring enzyme BF33_3024 PF02817 e3 binding domain BF33_3024 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BF33_303 PF04079 Segregation and condensation complex subunit ScpB BF33_3030 PF07992 Pyridine nucleotide-disulphide oxidoreductase BF33_3030 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BF33_3036 PF10042 Uncharacterized conserved protein (DUF2278) BF33_3037 PF02652 L-lactate permease BF33_3039 PF00290 Tryptophan synthase alpha chain BF33_3040 PF00291 Pyridoxal-phosphate dependent enzyme BF33_3041 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase BF33_3042 PF00218 Indole-3-glycerol phosphate synthase BF33_3043 PF00591 Glycosyl transferase family, a/b domain BF33_3043 PF02885 Glycosyl transferase family, helical bundle domain BF33_3044 PF02885 Glycosyl transferase family, helical bundle domain BF33_3044 PF00117 Glutamine amidotransferase class-I BF33_3044 PF00591 Glycosyl transferase family, a/b domain BF33_3046 PF00474 Sodium:solute symporter family BF33_3047 PF02368 Bacterial Ig-like domain (group 2) BF33_305 PF01979 Amidohydrolase family BF33_3050 PF00756 Putative esterase BF33_3052 PF13673 Acetyltransferase (GNAT) domain BF33_3053 PF13361 UvrD-like helicase C-terminal domain BF33_3053 PF00580 UvrD/REP helicase N-terminal domain BF33_3056 PF07098 Protein of unknown function (DUF1360) BF33_306 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase BF33_3060 PF04321 RmlD substrate binding domain BF33_3061 PF16363 GDP-mannose 4,6 dehydratase BF33_3062 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase BF33_3063 PF00483 Nucleotidyl transferase BF33_3067 PF13181 Tetratricopeptide repeat BF33_3067 PF00535 Glycosyl transferase family 2 BF33_3069 PF05711 Macrocin-O-methyltransferase (TylF) BF33_3070 PF08241 Methyltransferase domain BF33_3071 PF00535 Glycosyl transferase family 2 BF33_3072 PF01098 Cell cycle protein BF33_3073 PF00149 Calcineurin-like phosphoesterase BF33_3075 PF00849 RNA pseudouridylate synthase BF33_3076 PF01513 ATP-NAD kinase BF33_3077 PF04607 Region found in RelA / SpoT proteins BF33_3079 PF01928 CYTH domain BF33_3080 PF01152 Bacterial-like globin BF33_3083 PF08439 Oligopeptidase F BF33_3083 PF01432 Peptidase family M3 BF33_3085 PF13396 Phospholipase_D-nuclease N-terminal BF33_3085 PF13091 PLD-like domain BF33_3086 PF05389 Negative regulator of genetic competence (MecA) BF33_3087 PF03741 Integral membrane protein TerC family BF33_3088 PF03960 ArsC family BF33_309 PF03123 CAT RNA binding domain BF33_309 PF00874 PRD domain BF33_3090 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BF33_3091 PF01554 MatE BF33_3092 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BF33_3092 PF00005 ABC transporter BF33_3093 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BF33_3093 PF00005 ABC transporter BF33_3094 PF00528 Binding-protein-dependent transport system inner membrane component BF33_3094 PF12911 N-terminal TM domain of oligopeptide transport permease C BF33_3095 PF00528 Binding-protein-dependent transport system inner membrane component BF33_3096 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BF33_3098 PF00579 tRNA synthetases class I (W and Y) BF33_3099 PF12227 Protein of unknown function (DUF3603) BF33_31 PF01025 GrpE BF33_310 PF02378 Phosphotransferase system, EIIC BF33_310 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BF33_310 PF00367 phosphotransferase system, EIIB BF33_3100 PF10026 Predicted Zn-dependent protease (DUF2268) BF33_3101 PF00109 Beta-ketoacyl synthase, N-terminal domain BF33_3101 PF02801 Beta-ketoacyl synthase, C-terminal domain BF33_3102 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BF33_3102 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BF33_3103 PF10815 ComZ BF33_3107 PF00004 ATPase family associated with various cellular activities (AAA) BF33_3107 PF17871 AAA lid domain BF33_3107 PF02861 Clp amino terminal domain, pathogenicity island component BF33_3107 PF10431 C-terminal, D2-small domain, of ClpB protein BF33_3107 PF07724 AAA domain (Cdc48 subfamily) BF33_3108 PF14168 YjzC-like protein BF33_311 PF00381 PTS HPr component phosphorylation site BF33_3111 PF12758 Protein of unknown function (DUF3813) BF33_3112 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BF33_3112 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BF33_3114 PF00639 PPIC-type PPIASE domain BF33_3116 PF13509 S1 domain BF33_3116 PF17783 CvfB-like winged helix domain BF33_3117 PF04461 Protein of unknown function (DUF520) BF33_3119 PF00128 Alpha amylase, catalytic domain BF33_312 PF02896 PEP-utilising enzyme, TIM barrel domain BF33_312 PF05524 PEP-utilising enzyme, N-terminal BF33_312 PF00391 PEP-utilising enzyme, mobile domain BF33_3120 PF00909 Ammonium Transporter Family BF33_3121 PF06628 Catalase-related immune-responsive BF33_3121 PF00199 Catalase BF33_3123 PF00733 Asparagine synthase BF33_3123 PF13537 Glutamine amidotransferase domain BF33_3125 PF07457 Protein of unknown function (DUF1516) BF33_3126 PF00202 Aminotransferase class-III BF33_3128 PF01557 Fumarylacetoacetate (FAA) hydrolase family BF33_3129 PF09388 Spo0E like sporulation regulatory protein BF33_3130 PF10676 Spore germination protein gerPA/gerPF BF33_3131 PF10803 Spore germination GerPB BF33_3132 PF10737 Spore germination protein GerPC BF33_3134 PF10970 Spore germination protein GerPE BF33_3135 PF10676 Spore germination protein gerPA/gerPF BF33_3137 PF13361 UvrD-like helicase C-terminal domain BF33_3137 PF00580 UvrD/REP helicase N-terminal domain BF33_3137 PF12705 PD-(D/E)XK nuclease superfamily BF33_3138 PF12705 PD-(D/E)XK nuclease superfamily BF33_3138 PF13361 UvrD-like helicase C-terminal domain BF33_3139 PF10502 Signal peptidase, peptidase S26 BF33_3140 PF09335 SNARE associated Golgi protein BF33_3142 PF06338 ComK protein BF33_3146 PF00313 'Cold-shock' DNA-binding domain BF33_3148 PF00463 Isocitrate lyase family BF33_3149 PF01274 Malate synthase BF33_315 PF00881 Nitroreductase family BF33_3150 PF00395 S-layer homology domain BF33_3152 PF00150 Cellulase (glycosyl hydrolase family 5) BF33_3152 PF03424 Carbohydrate binding domain (family 17/28) BF33_3152 PF00395 S-layer homology domain BF33_3153 PF00892 EamA-like transporter family BF33_3154 PF16491 CAAX prenyl protease N-terminal, five membrane helices BF33_3154 PF01435 Peptidase family M48 BF33_3159 PF00486 Transcriptional regulatory protein, C terminal BF33_3159 PF00072 Response regulator receiver domain BF33_316 PF00990 Diguanylate cyclase, GGDEF domain BF33_3160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF33_3160 PF00512 His Kinase A (phospho-acceptor) domain BF33_3163 PF06445 GyrI-like small molecule binding domain BF33_3163 PF12833 Helix-turn-helix domain BF33_3164 PF08281 Sigma-70, region 4 BF33_3164 PF04542 Sigma-70 region 2 BF33_3166 PF01966 HD domain BF33_3168 PF00149 Calcineurin-like phosphoesterase BF33_3169 PF07968 Leukocidin/Hemolysin toxin family BF33_317 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BF33_317 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BF33_3176 PF05593 RHS Repeat BF33_3179 PF05593 RHS Repeat BF33_3180 PF00395 S-layer homology domain BF33_3180 PF01520 N-acetylmuramoyl-L-alanine amidase BF33_3186 PF00664 ABC transporter transmembrane region BF33_3186 PF03412 Peptidase C39 family BF33_3186 PF00005 ABC transporter BF33_3188 PF13193 AMP-binding enzyme C-terminal domain BF33_3188 PF00501 AMP-binding enzyme BF33_3190 PF10437 Bacterial lipoate protein ligase C-terminus BF33_3190 PF03099 Biotin/lipoate A/B protein ligase family BF33_3191 PF12706 Beta-lactamase superfamily domain BF33_3192 PF14149 YhfH-like protein BF33_3193 PF00356 Bacterial regulatory proteins, lacI family BF33_3194 PF13280 WYL domain BF33_3194 PF08279 HTH domain BF33_32 PF00012 Hsp70 protein BF33_320 PF03079 ARD/ARD' family BF33_3201 PF00440 Bacterial regulatory proteins, tetR family BF33_3201 PF17932 Tetracyclin repressor-like, C-terminal domain BF33_3209 PF01208 Uroporphyrinogen decarboxylase (URO-D) BF33_321 PF00596 Class II Aldolase and Adducin N-terminal domain BF33_3210 PF00905 Penicillin binding protein transpeptidase domain BF33_3210 PF00912 Transglycosylase BF33_3211 PF03992 Antibiotic biosynthesis monooxygenase BF33_3212 PF03703 Bacterial PH domain BF33_3213 PF03703 Bacterial PH domain BF33_3221 PF03703 Bacterial PH domain BF33_3222 PF03703 Bacterial PH domain BF33_3224 PF00440 Bacterial regulatory proteins, tetR family BF33_3224 PF17934 Tetracyclin repressor-like, C-terminal domain BF33_323 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain BF33_323 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain BF33_3234 PF12787 EcsC protein family BF33_3235 PF05975 Bacterial ABC transporter protein EcsB BF33_3236 PF00005 ABC transporter BF33_3237 PF01230 HIT domain BF33_3238 PF12732 YtxH-like protein BF33_3239 PF01047 MarR family BF33_324 PF00155 Aminotransferase class I and II BF33_3243 PF13538 UvrD-like helicase C-terminal domain BF33_3245 PF07690 Major Facilitator Superfamily BF33_3246 PF07690 Major Facilitator Superfamily BF33_3249 PF01098 Cell cycle protein BF33_325 PF00795 Carbon-nitrogen hydrolase BF33_3251 PF04542 Sigma-70 region 2 BF33_3251 PF08281 Sigma-70, region 4 BF33_3253 PF13276 HTH-like domain BF33_3253 PF13333 Integrase core domain BF33_3253 PF00665 Integrase core domain BF33_3255 PF01266 FAD dependent oxidoreductase BF33_3255 PF16901 C-terminal domain of alpha-glycerophosphate oxidase BF33_3256 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BF33_3256 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BF33_3257 PF00230 Major intrinsic protein BF33_3258 PF04309 Glycerol-3-phosphate responsive antiterminator BF33_326 PF01636 Phosphotransferase enzyme family BF33_3262 PF08386 TAP-like protein BF33_3262 PF00561 alpha/beta hydrolase fold BF33_3264 PF17874 MalT-like TPR region BF33_3264 PF18801 response regulator aspartate phosphatase H, N terminal BF33_3265 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BF33_3266 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BF33_3269 PF14449 Pre-toxin TG BF33_3269 PF04740 LXG domain of WXG superfamily BF33_3269 PF14431 YwqJ-like deaminase BF33_3272 PF01336 OB-fold nucleic acid binding domain BF33_3272 PF01966 HD domain BF33_3273 PF13514 AAA domain BF33_3274 PF00149 Calcineurin-like phosphoesterase BF33_3277 PF11121 Protein of unknown function (DUF2639) BF33_3280 PF00107 Zinc-binding dehydrogenase BF33_3280 PF08240 Alcohol dehydrogenase GroES-like domain BF33_3283 PF01906 Putative heavy-metal-binding BF33_3288 PF00512 His Kinase A (phospho-acceptor) domain BF33_3288 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF33_3288 PF00497 Bacterial extracellular solute-binding proteins, family 3 BF33_3288 PF00072 Response regulator receiver domain BF33_3288 PF01627 Hpt domain BF33_3289 PF01739 CheR methyltransferase, SAM binding domain BF33_3289 PF03705 CheR methyltransferase, all-alpha domain BF33_3290 PF07228 Stage II sporulation protein E (SpoIIE) BF33_3290 PF13426 PAS domain BF33_3292 PF04545 Sigma-70, region 4 BF33_3292 PF04542 Sigma-70 region 2 BF33_3292 PF04539 Sigma-70 region 3 BF33_3293 PF13581 Histidine kinase-like ATPase domain BF33_3294 PF01740 STAS domain BF33_3297 PF05532 CsbD-like BF33_3298 PF11181 Heat induced stress protein YflT BF33_33 PF01556 DnaJ C terminal domain BF33_33 PF00226 DnaJ domain BF33_33 PF00684 DnaJ central domain BF33_330 PF03551 Transcriptional regulator PadR-like family BF33_3303 PF00395 S-layer homology domain BF33_3307 PF01966 HD domain BF33_3307 PF00672 HAMP domain BF33_3309 PF02733 Dak1 domain BF33_3311 PF02733 Dak1 domain BF33_3317 PF01066 CDP-alcohol phosphatidyltransferase BF33_3333 PF07690 Major Facilitator Superfamily BF33_3335 PF01925 Sulfite exporter TauE/SafE BF33_3337 PF00772 DnaB-like helicase N terminal domain BF33_3337 PF03796 DnaB-like helicase C terminal domain BF33_3342 PF12008 Type I restriction and modification enzyme - subunit R C terminal BF33_3342 PF18766 SWI2/SNF2 ATPase BF33_3342 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) BF33_3344 PF12161 HsdM N-terminal domain BF33_3344 PF02384 N-6 DNA Methylase BF33_3347 PF08463 EcoEI R protein C-terminal BF33_3347 PF04851 Type III restriction enzyme, res subunit BF33_3347 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) BF33_3347 PF00271 Helicase conserved C-terminal domain BF33_3348 PF00293 NUDIX domain BF33_3349 PF03401 Tripartite tricarboxylate transporter family receptor BF33_3350 PF12431 Transcriptional regulator BF33_3350 PF08279 HTH domain BF33_3350 PF00072 Response regulator receiver domain BF33_3351 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain BF33_3351 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF33_3352 PF00083 Sugar (and other) transporter BF33_3355 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BF33_3355 PF00005 ABC transporter BF33_3356 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BF33_3356 PF00005 ABC transporter BF33_3357 PF12911 N-terminal TM domain of oligopeptide transport permease C BF33_3357 PF00528 Binding-protein-dependent transport system inner membrane component BF33_3358 PF00528 Binding-protein-dependent transport system inner membrane component BF33_3359 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BF33_336 PF00293 NUDIX domain BF33_3363 PF18593 CdiI immunity protein BF33_3364 PF02423 Ornithine cyclodeaminase/mu-crystallin family BF33_3365 PF05544 Proline racemase BF33_3366 PF11121 Protein of unknown function (DUF2639) BF33_3368 PF01520 N-acetylmuramoyl-L-alanine amidase BF33_3368 PF00395 S-layer homology domain BF33_3369 PF05343 M42 glutamyl aminopeptidase BF33_337 PF02803 Thiolase, C-terminal domain BF33_337 PF00108 Thiolase, N-terminal domain BF33_3373 PF00378 Enoyl-CoA hydratase/isomerase BF33_3376 PF03062 MBOAT, membrane-bound O-acyltransferase family BF33_3377 PF03062 MBOAT, membrane-bound O-acyltransferase family BF33_3379 PF00395 S-layer homology domain BF33_3380 PF02368 Bacterial Ig-like domain (group 2) BF33_3380 PF00395 S-layer homology domain BF33_3380 PF13205 Bacterial Ig-like domain BF33_3382 PF14667 Polysaccharide biosynthesis C-terminal domain BF33_3382 PF01943 Polysaccharide biosynthesis protein BF33_3383 PF01043 SecA preprotein cross-linking domain BF33_3383 PF07516 SecA Wing and Scaffold domain BF33_3383 PF07517 SecA DEAD-like domain BF33_3387 PF01740 STAS domain BF33_3387 PF00916 Sulfate permease family BF33_3389 PF13193 AMP-binding enzyme C-terminal domain BF33_3389 PF00501 AMP-binding enzyme BF33_3390 PF04055 Radical SAM superfamily BF33_3391 PF01471 Putative peptidoglycan binding domain BF33_3391 PF01510 N-acetylmuramoyl-L-alanine amidase BF33_3394 PF02245 Methylpurine-DNA glycosylase (MPG) BF33_3395 PF03306 Alpha-acetolactate decarboxylase BF33_3396 PF00205 Thiamine pyrophosphate enzyme, central domain BF33_3396 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BF33_3396 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BF33_3399 PF06133 Control of competence regulator ComK, YlbF/YmcA BF33_3400 PF04286 Protein of unknown function (DUF445) BF33_3402 PF14398 YheC/D like ATP-grasp BF33_3404 PF00269 Small, acid-soluble spore proteins, alpha/beta type BF33_3405 PF00005 ABC transporter BF33_3406 PF00528 Binding-protein-dependent transport system inner membrane component BF33_3407 PF00497 Bacterial extracellular solute-binding proteins, family 3 BF33_3408 PF00005 ABC transporter BF33_3408 PF00664 ABC transporter transmembrane region BF33_3409 PF00005 ABC transporter BF33_3409 PF00664 ABC transporter transmembrane region BF33_3410 PF00171 Aldehyde dehydrogenase family BF33_3412 PF01177 Asp/Glu/Hydantoin racemase BF33_3413 PF13520 Amino acid permease BF33_3415 PF18011 C-terminal domain found in long catalases BF33_3415 PF06628 Catalase-related immune-responsive BF33_3415 PF00199 Catalase BF33_3416 PF01965 DJ-1/PfpI family BF33_3418 PF07690 Major Facilitator Superfamily BF33_3419 PF12793 Sugar transport-related sRNA regulator N-term BF33_3419 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BF33_3421 PF02525 Flavodoxin-like fold BF33_3423 PF01638 HxlR-like helix-turn-helix BF33_3424 PF07690 Major Facilitator Superfamily BF33_3425 PF00440 Bacterial regulatory proteins, tetR family BF33_3425 PF17934 Tetracyclin repressor-like, C-terminal domain BF33_3426 PF00893 Small Multidrug Resistance protein BF33_3427 PF00893 Small Multidrug Resistance protein BF33_3429 PF01037 Lrp/AsnC ligand binding domain BF33_3430 PF00892 EamA-like transporter family BF33_3433 PF07681 DoxX BF33_3435 PF00367 phosphotransferase system, EIIB BF33_3435 PF02378 Phosphotransferase system, EIIC BF33_3436 PF01380 SIS domain BF33_3437 PF01380 SIS domain BF33_3437 PF01418 Helix-turn-helix domain, rpiR family BF33_3439 PF00999 Sodium/hydrogen exchanger family BF33_3440 PF13520 Amino acid permease BF33_3447 PF09335 SNARE associated Golgi protein BF33_3449 PF02735 Ku70/Ku80 beta-barrel domain BF33_345 PF00005 ABC transporter BF33_345 PF17912 MalK OB fold domain BF33_345 PF03459 TOBE domain BF33_3452 PF11007 Spore coat associated protein JA (CotJA) BF33_3453 PF12652 CotJB protein BF33_3454 PF05067 Manganese containing catalase BF33_3455 PF05525 Branched-chain amino acid transport protein BF33_3458 PF09529 Integral membrane protein (intg_mem_TP0381) BF33_346 PF16657 Maltogenic Amylase, C-terminal domain BF33_346 PF00128 Alpha amylase, catalytic domain BF33_3460 PF00005 ABC transporter BF33_3461 PF12704 MacB-like periplasmic core domain BF33_3461 PF02687 FtsX-like permease family BF33_3462 PF06725 3D domain BF33_3462 PF01476 LysM domain BF33_3465 PF02378 Phosphotransferase system, EIIC BF33_3466 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BF33_3467 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit BF33_3468 PF05043 Mga helix-turn-helix domain BF33_3468 PF00874 PRD domain BF33_3468 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BF33_3468 PF08279 HTH domain BF33_347 PF02903 Alpha amylase, N-terminal ig-like domain BF33_347 PF16657 Maltogenic Amylase, C-terminal domain BF33_347 PF00128 Alpha amylase, catalytic domain BF33_3470 PF07690 Major Facilitator Superfamily BF33_3471 PF02690 Na+/Pi-cotransporter BF33_3472 PF00107 Zinc-binding dehydrogenase BF33_3472 PF08240 Alcohol dehydrogenase GroES-like domain BF33_3473 PF03816 Cell envelope-related transcriptional attenuator domain BF33_3475 PF01925 Sulfite exporter TauE/SafE BF33_3476 PF13686 DsrE/DsrF/DrsH-like family BF33_3478 PF00581 Rhodanese-like domain BF33_3479 PF01206 Sulfurtransferase TusA BF33_348 PF13416 Bacterial extracellular solute-binding protein BF33_3480 PF00581 Rhodanese-like domain BF33_3480 PF00753 Metallo-beta-lactamase superfamily BF33_3481 PF01206 Sulfurtransferase TusA BF33_3481 PF00581 Rhodanese-like domain BF33_3482 PF02583 Metal-sensitive transcriptional repressor BF33_3483 PF07992 Pyridine nucleotide-disulphide oxidoreductase BF33_3483 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BF33_3485 PF00089 Trypsin BF33_3487 PF04293 SpoVR like protein BF33_3488 PF00881 Nitroreductase family BF33_349 PF00528 Binding-protein-dependent transport system inner membrane component BF33_3490 PF03323 Bacillus/Clostridium GerA spore germination protein BF33_3492 PF03845 Spore germination protein BF33_3494 PF14148 YhdB-like protein BF33_3495 PF02600 Disulfide bond formation protein DsbB BF33_3496 PF00085 Thioredoxin BF33_3499 PF03734 L,D-transpeptidase catalytic domain BF33_3499 PF17969 L,D-transpeptidase C-terminal domain BF33_35 PF04452 RNA methyltransferase BF33_350 PF00528 Binding-protein-dependent transport system inner membrane component BF33_3501 PF00860 Permease family BF33_3504 PF01047 MarR family BF33_3505 PF07690 Major Facilitator Superfamily BF33_3506 PF02702 Osmosensitive K+ channel His kinase sensor domain BF33_3507 PF02669 K+-transporting ATPase, c chain BF33_3509 PF03814 Potassium-transporting ATPase A subunit BF33_351 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BF33_351 PF00356 Bacterial regulatory proteins, lacI family BF33_3513 PF08543 Phosphomethylpyrimidine kinase BF33_3514 PF00899 ThiF family BF33_3515 PF05690 Thiazole biosynthesis protein ThiG BF33_3516 PF02597 ThiS family BF33_3517 PF01266 FAD dependent oxidoreductase BF33_3518 PF02581 Thiamine monophosphate synthase BF33_3519 PF09084 NMT1/THI5 like BF33_352 PF00155 Aminotransferase class I and II BF33_3520 PF00528 Binding-protein-dependent transport system inner membrane component BF33_3521 PF00005 ABC transporter BF33_3522 PF03070 TENA/THI-4/PQQC family BF33_3523 PF00246 Zinc carboxypeptidase BF33_3523 PF08239 Bacterial SH3 domain BF33_3526 PF00571 CBS domain BF33_354 PF00512 His Kinase A (phospho-acceptor) domain BF33_354 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF33_3551 PF00873 AcrB/AcrD/AcrF family BF33_3552 PF00528 Binding-protein-dependent transport system inner membrane component BF33_3553 PF00528 Binding-protein-dependent transport system inner membrane component BF33_3554 PF12849 PBP superfamily domain BF33_3555 PF02421 Ferrous iron transport protein B BF33_3555 PF04023 FeoA domain BF33_3555 PF07664 Ferrous iron transport protein B C terminus BF33_3555 PF07670 Nucleoside recognition BF33_3555 PF17910 FeoB cytosolic helical domain BF33_3556 PF07670 Nucleoside recognition BF33_3556 PF02421 Ferrous iron transport protein B BF33_3556 PF17910 FeoB cytosolic helical domain BF33_3556 PF07664 Ferrous iron transport protein B C terminus BF33_3557 PF17910 FeoB cytosolic helical domain BF33_3557 PF02421 Ferrous iron transport protein B BF33_3557 PF07670 Nucleoside recognition BF33_3557 PF07664 Ferrous iron transport protein B C terminus BF33_3558 PF05504 Spore germination B3/ GerAC like, C-terminal BF33_3559 PF03845 Spore germination protein BF33_356 PF14040 Deoxyribonuclease NucA/NucB BF33_3560 PF03323 Bacillus/Clostridium GerA spore germination protein BF33_3561 PF00474 Sodium:solute symporter family BF33_3562 PF11755 Protein of unknown function (DUF3311) BF33_3563 PF01546 Peptidase family M20/M25/M40 BF33_3563 PF07687 Peptidase dimerisation domain BF33_3564 PF13529 Peptidase_C39 like family BF33_3565 PF02790 Cytochrome C oxidase subunit II, transmembrane domain BF33_3566 PF00115 Cytochrome C and Quinol oxidase polypeptide I BF33_3567 PF00510 Cytochrome c oxidase subunit III BF33_3569 PF00999 Sodium/hydrogen exchanger family BF33_3569 PF02080 TrkA-C domain BF33_3569 PF02254 TrkA-N domain BF33_3571 PF13673 Acetyltransferase (GNAT) domain BF33_3574 PF00860 Permease family BF33_3575 PF00324 Amino acid permease BF33_3578 PF05525 Branched-chain amino acid transport protein BF33_3579 PF00854 POT family BF33_358 PF01717 Cobalamin-independent synthase, Catalytic domain BF33_358 PF08267 Cobalamin-independent synthase, N-terminal domain BF33_3580 PF04203 Sortase domain BF33_3582 PF01381 Helix-turn-helix BF33_3583 PF07501 G5 domain BF33_3583 PF03990 G5-linked-Ubiquitin-like domain BF33_3583 PF06725 3D domain BF33_3584 PF00672 HAMP domain BF33_3584 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BF33_3584 PF02743 Cache domain BF33_3585 PF02673 Bacitracin resistance protein BacA BF33_3590 PF03372 Endonuclease/Exonuclease/phosphatase family BF33_3591 PF00882 Zinc dependent phospholipase C BF33_3593 PF00107 Zinc-binding dehydrogenase BF33_3593 PF08240 Alcohol dehydrogenase GroES-like domain BF33_3595 PF05547 Immune inhibitor A peptidase M6 BF33_3596 PF00923 Transaldolase/Fructose-6-phosphate aldolase BF33_3597 PF13407 Periplasmic binding protein domain BF33_3598 PF02653 Branched-chain amino acid transport system / permease component BF33_3599 PF00005 ABC transporter BF33_36 PF04055 Radical SAM superfamily BF33_36 PF00919 Uncharacterized protein family UPF0004 BF33_36 PF01938 TRAM domain BF33_360 PF07690 Major Facilitator Superfamily BF33_3600 PF05025 RbsD / FucU transport protein family BF33_3601 PF00294 pfkB family carbohydrate kinase BF33_3602 PF00356 Bacterial regulatory proteins, lacI family BF33_3603 PF07690 Major Facilitator Superfamily BF33_3604 PF01047 MarR family BF33_3605 PF07690 Major Facilitator Superfamily BF33_3606 PF00005 ABC transporter BF33_3606 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BF33_3607 PF00005 ABC transporter BF33_3607 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BF33_3608 PF00528 Binding-protein-dependent transport system inner membrane component BF33_3609 PF00528 Binding-protein-dependent transport system inner membrane component BF33_3610 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BF33_3612 PF00582 Universal stress protein family BF33_3613 PF01740 STAS domain BF33_3613 PF00916 Sulfate permease family BF33_3615 PF00486 Transcriptional regulatory protein, C terminal BF33_3615 PF00072 Response regulator receiver domain BF33_3616 PF18698 Histidine kinase sensor domain BF33_3616 PF00989 PAS fold BF33_3616 PF00672 HAMP domain BF33_3616 PF00512 His Kinase A (phospho-acceptor) domain BF33_3616 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF33_3617 PF01872 RibD C-terminal domain BF33_3618 PF13280 WYL domain BF33_3618 PF08279 HTH domain BF33_3620 PF08281 Sigma-70, region 4 BF33_3620 PF04542 Sigma-70 region 2 BF33_3623 PF00324 Amino acid permease BF33_3624 PF00528 Binding-protein-dependent transport system inner membrane component BF33_3625 PF00528 Binding-protein-dependent transport system inner membrane component BF33_3626 PF00497 Bacterial extracellular solute-binding proteins, family 3 BF33_3627 PF00005 ABC transporter BF33_3628 PF01235 Sodium:alanine symporter family BF33_3629 PF01636 Phosphotransferase enzyme family BF33_3631 PF03323 Bacillus/Clostridium GerA spore germination protein BF33_3634 PF16657 Maltogenic Amylase, C-terminal domain BF33_3634 PF00128 Alpha amylase, catalytic domain BF33_3635 PF00367 phosphotransferase system, EIIB BF33_3635 PF02378 Phosphotransferase system, EIIC BF33_3636 PF07702 UTRA domain BF33_3636 PF00392 Bacterial regulatory proteins, gntR family BF33_3637 PF13520 Amino acid permease BF33_3638 PF00990 Diguanylate cyclase, GGDEF domain BF33_3638 PF03707 Bacterial signalling protein N terminal repeat BF33_3638 PF00563 EAL domain BF33_3641 PF13396 Phospholipase_D-nuclease N-terminal BF33_3641 PF13091 PLD-like domain BF33_3642 PF07728 AAA domain (dynein-related subfamily) BF33_3643 PF00092 von Willebrand factor type A domain BF33_3644 PF13344 Haloacid dehalogenase-like hydrolase BF33_3644 PF00293 NUDIX domain BF33_3645 PF01370 NAD dependent epimerase/dehydratase family BF33_3646 PF00155 Aminotransferase class I and II BF33_3647 PF00005 ABC transporter BF33_3648 PF01032 FecCD transport family BF33_3649 PF01032 FecCD transport family BF33_365 PF14177 YkyB-like protein BF33_3650 PF01497 Periplasmic binding protein BF33_3651 PF00854 POT family BF33_3652 PF08141 Small acid-soluble spore protein H family BF33_3653 PF01022 Bacterial regulatory protein, arsR family BF33_3654 PF02652 L-lactate permease BF33_3655 PF00206 Lyase BF33_3655 PF10415 Fumarase C C-terminus BF33_3656 PF00571 CBS domain BF33_3656 PF03471 Transporter associated domain BF33_3656 PF01595 Cyclin M transmembrane N-terminal domain BF33_3657 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BF33_3658 PF01773 Na+ dependent nucleoside transporter N-terminus BF33_3658 PF07662 Na+ dependent nucleoside transporter C-terminus BF33_3659 PF03816 Cell envelope-related transcriptional attenuator domain BF33_366 PF02541 Ppx/GppA phosphatase family BF33_3660 PF04294 VanW like protein BF33_3664 PF07504 Fungalysin/Thermolysin Propeptide Motif BF33_3664 PF02868 Thermolysin metallopeptidase, alpha-helical domain BF33_3664 PF03413 Peptidase propeptide and YPEB domain BF33_3664 PF01447 Thermolysin metallopeptidase, catalytic domain BF33_3667 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family BF33_3667 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain BF33_3667 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain BF33_3668 PF00403 Heavy-metal-associated domain BF33_3669 PF01022 Bacterial regulatory protein, arsR family BF33_367 PF17941 Polyphosphate kinase C-terminal domain 1 BF33_367 PF13089 Polyphosphate kinase N-terminal domain BF33_367 PF13090 Polyphosphate kinase C-terminal domain 2 BF33_367 PF02503 Polyphosphate kinase middle domain BF33_3670 PF13520 Amino acid permease BF33_3671 PF05222 Alanine dehydrogenase/PNT, N-terminal domain BF33_3671 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BF33_3673 PF07849 Protein of unknown function (DUF1641) BF33_3674 PF00037 4Fe-4S binding domain BF33_3674 PF01568 Molydopterin dinucleotide binding domain BF33_3674 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BF33_3674 PF00384 Molybdopterin oxidoreductase BF33_3674 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BF33_3675 PF02634 FdhD/NarQ family BF33_3676 PF00583 Acetyltransferase (GNAT) family BF33_3676 PF13508 Acetyltransferase (GNAT) domain BF33_3678 PF00486 Transcriptional regulatory protein, C terminal BF33_3678 PF00072 Response regulator receiver domain BF33_3679 PF18698 Histidine kinase sensor domain BF33_3679 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF33_3679 PF00512 His Kinase A (phospho-acceptor) domain BF33_3679 PF00672 HAMP domain BF33_3679 PF00989 PAS fold BF33_3681 PF00155 Aminotransferase class I and II BF33_3681 PF00392 Bacterial regulatory proteins, gntR family BF33_3682 PF00892 EamA-like transporter family BF33_3684 PF00390 Malic enzyme, N-terminal domain BF33_3684 PF03949 Malic enzyme, NAD binding domain BF33_3685 PF03390 2-hydroxycarboxylate transporter family BF33_3686 PF00072 Response regulator receiver domain BF33_3687 PF00989 PAS fold BF33_3687 PF17203 Single cache domain 3 BF33_3687 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF33_3687 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain BF33_3688 PF02743 Cache domain BF33_3688 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BF33_3688 PF00672 HAMP domain BF33_3689 PF13529 Peptidase_C39 like family BF33_369 PF10518 TAT (twin-arginine translocation) pathway signal sequence BF33_369 PF00149 Calcineurin-like phosphoesterase BF33_3691 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF33_3691 PF00512 His Kinase A (phospho-acceptor) domain BF33_3692 PF00486 Transcriptional regulatory protein, C terminal BF33_3692 PF00072 Response regulator receiver domain BF33_3693 PF00149 Calcineurin-like phosphoesterase BF33_3694 PF13416 Bacterial extracellular solute-binding protein BF33_3695 PF00528 Binding-protein-dependent transport system inner membrane component BF33_3696 PF00528 Binding-protein-dependent transport system inner membrane component BF33_3697 PF00005 ABC transporter BF33_3697 PF17912 MalK OB fold domain BF33_3698 PF04309 Glycerol-3-phosphate responsive antiterminator BF33_37 PF01165 Ribosomal protein S21 BF33_3702 PF03600 Citrate transporter BF33_3703 PF12431 Transcriptional regulator BF33_3703 PF00072 Response regulator receiver domain BF33_3704 PF17203 Single cache domain 3 BF33_3704 PF00989 PAS fold BF33_3704 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF33_3704 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain BF33_3705 PF00672 HAMP domain BF33_3705 PF02743 Cache domain BF33_3705 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BF33_3706 PF01145 SPFH domain / Band 7 family BF33_3706 PF15975 Flotillin BF33_3708 PF18496 Collagenase G catalytic helper subdomain BF33_3708 PF01752 Collagenase BF33_3708 PF08453 Peptidase family M9 N-terminal BF33_3709 PF02028 BCCT, betaine/carnitine/choline family transporter BF33_371 PF10388 EAL-domain associated signalling protein domain BF33_371 PF00563 EAL domain BF33_3715 PF08239 Bacterial SH3 domain BF33_3715 PF01520 N-acetylmuramoyl-L-alanine amidase BF33_3716 PF04688 SPP1 phage holin BF33_3735 PF03354 Phage Terminase BF33_374 PF08796 Protein of unknown function (DUF1797) BF33_3740 PF00589 Phage integrase family BF33_3744 PF01555 DNA methylase BF33_3750 PF00692 dUTPase BF33_3755 PF00772 DnaB-like helicase N terminal domain BF33_3755 PF03796 DnaB-like helicase C terminal domain BF33_376 PF04308 Ribonuclease H-like BF33_3763 PF01381 Helix-turn-helix BF33_3767 PF04285 Protein of unknown function (DUF444) BF33_3769 PF08298 PrkA AAA domain BF33_3769 PF06798 PrkA serine protein kinase C-terminal domain BF33_3771 PF03707 Bacterial signalling protein N terminal repeat BF33_3771 PF00990 Diguanylate cyclase, GGDEF domain BF33_3771 PF00563 EAL domain BF33_3772 PF00588 SpoU rRNA Methylase family BF33_3773 PF12671 Putative amidase domain BF33_3774 PF08331 Domain of unknown function (DUF1730) BF33_3776 PF13462 Thioredoxin BF33_3777 PF00905 Penicillin binding protein transpeptidase domain BF33_3777 PF00912 Transglycosylase BF33_3778 PF13344 Haloacid dehalogenase-like hydrolase BF33_3778 PF00293 NUDIX domain BF33_3779 PF01709 Transcriptional regulator BF33_379 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BF33_379 PF03466 LysR substrate binding domain BF33_38 PF09424 Yqey-like protein BF33_380 PF14602 Hexapeptide repeat of succinyl-transferase BF33_380 PF00132 Bacterial transferase hexapeptide (six repeats) BF33_380 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal BF33_3800 PF11023 Zinc-ribbon containing domain BF33_3801 PF01475 Ferric uptake regulator family BF33_3802 PF00578 AhpC/TSA family BF33_3803 PF07885 Ion channel BF33_3806 PF00005 ABC transporter BF33_3807 PF00202 Aminotransferase class-III BF33_3808 PF00310 Glutamine amidotransferases class-II BF33_3808 PF01493 GXGXG motif BF33_3808 PF01645 Conserved region in glutamate synthase BF33_3808 PF04898 Glutamate synthase central domain BF33_3809 PF06081 Aromatic acid exporter family member 1 BF33_381 PF01546 Peptidase family M20/M25/M40 BF33_381 PF07687 Peptidase dimerisation domain BF33_3810 PF00005 ABC transporter BF33_3810 PF00664 ABC transporter transmembrane region BF33_3811 PF04167 Protein of unknown function (DUF402) BF33_3812 PF14182 YgaB-like protein BF33_3813 PF04259 Small, acid-soluble spore protein, gamma-type BF33_3815 PF14815 NUDIX domain BF33_3815 PF00730 HhH-GPD superfamily base excision DNA repair protein BF33_3816 PF04307 LexA-binding, inner membrane-associated putative hydrolase BF33_3817 PF14043 WVELL protein BF33_3818 PF08176 Small acid-soluble spore protein K family BF33_3821 PF02631 RecX family BF33_3822 PF08338 Domain of unknown function (DUF1731) BF33_3822 PF01370 NAD dependent epimerase/dehydratase family BF33_3823 PF01979 Amidohydrolase family BF33_3826 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase BF33_3826 PF04101 Glycosyltransferase family 28 C-terminal domain BF33_3827 PF04055 Radical SAM superfamily BF33_3828 PF01228 Glycine radical BF33_3828 PF02901 Pyruvate formate lyase-like BF33_3829 PF00535 Glycosyl transferase family 2 BF33_383 PF02080 TrkA-C domain BF33_383 PF02254 TrkA-N domain BF33_3830 PF02911 Formyl transferase, C-terminal domain BF33_3830 PF01370 NAD dependent epimerase/dehydratase family BF33_3830 PF00551 Formyl transferase BF33_3831 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BF33_3831 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BF33_3831 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BF33_3832 PF00535 Glycosyl transferase family 2 BF33_3835 PF00144 Beta-lactamase BF33_3836 PF02378 Phosphotransferase system, EIIC BF33_3836 PF00367 phosphotransferase system, EIIB BF33_3837 PF04960 Glutaminase BF33_384 PF17770 Ribonuclease J C-terminal domain BF33_384 PF00753 Metallo-beta-lactamase superfamily BF33_384 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain BF33_3842 PF01546 Peptidase family M20/M25/M40 BF33_3842 PF07687 Peptidase dimerisation domain BF33_3844 PF01416 tRNA pseudouridine synthase BF33_3845 PF01938 TRAM domain BF33_3845 PF05958 tRNA (Uracil-5-)-methyltransferase BF33_3846 PF00730 HhH-GPD superfamily base excision DNA repair protein BF33_3847 PF01522 Polysaccharide deacetylase BF33_3848 PF05683 Fumarase C-terminus BF33_3848 PF05681 Fumarate hydratase (Fumerase) BF33_3850 PF08756 YfkB-like domain BF33_3850 PF04055 Radical SAM superfamily BF33_3851 PF14167 YfkD-like protein BF33_3852 PF01699 Sodium/calcium exchanger protein BF33_3853 PF16242 Pyridoxamine 5'-phosphate oxidase like BF33_3856 PF09335 SNARE associated Golgi protein BF33_3858 PF10502 Signal peptidase, peptidase S26 BF33_3861 PF00892 EamA-like transporter family BF33_3863 PF03631 Virulence factor BrkB BF33_3865 PF01451 Low molecular weight phosphotyrosine protein phosphatase BF33_3866 PF06569 Protein of unknown function (DUF1128) BF33_3867 PF00690 Cation transporter/ATPase, N-terminus BF33_3867 PF00689 Cation transporting ATPase, C-terminus BF33_3868 PF05816 Toxic anion resistance protein (TelA) BF33_3869 PF14266 Putative component of 'biosynthetic module' BF33_387 PF01327 Polypeptide deformylase BF33_3870 PF03741 Integral membrane protein TerC family BF33_3871 PF02342 TerD domain BF33_3872 PF02342 TerD domain BF33_3873 PF02342 TerD domain BF33_3874 PF00480 ROK family BF33_3876 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BF33_3876 PF09180 Prolyl-tRNA synthetase, C-terminal BF33_3876 PF03129 Anticodon binding domain BF33_3879 PF11700 Vacuole effluxer Atg22 like BF33_3883 PF00440 Bacterial regulatory proteins, tetR family BF33_3883 PF08360 QacR-like protein, C-terminal region BF33_3889 PF00041 Fibronectin type III domain BF33_3889 PF00704 Glycosyl hydrolases family 18 BF33_389 PF00676 Dehydrogenase E1 component BF33_3890 PF00005 ABC transporter BF33_3890 PF12848 ABC transporter BF33_3891 PF00005 ABC transporter BF33_3893 PF00528 Binding-protein-dependent transport system inner membrane component BF33_3894 PF01910 Thiamine-binding protein BF33_3895 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BF33_3895 PF00672 HAMP domain BF33_3896 PF03605 Anaerobic c4-dicarboxylate membrane transporter BF33_3897 PF02581 Thiamine monophosphate synthase BF33_3898 PF02110 Hydroxyethylthiazole kinase family BF33_3899 PF01751 Toprim domain BF33_3899 PF01131 DNA topoisomerase BF33_39 PF07873 YabP family BF33_390 PF02780 Transketolase, C-terminal domain BF33_390 PF02779 Transketolase, pyrimidine binding domain BF33_3900 PF01061 ABC-2 type transporter BF33_3901 PF03372 Endonuclease/Exonuclease/phosphatase family BF33_3902 PF02378 Phosphotransferase system, EIIC BF33_3902 PF00367 phosphotransferase system, EIIB BF33_3902 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BF33_3903 PF16657 Maltogenic Amylase, C-terminal domain BF33_3903 PF00128 Alpha amylase, catalytic domain BF33_3906 PF00696 Amino acid kinase family BF33_3907 PF13520 Amino acid permease BF33_3908 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BF33_3908 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BF33_391 PF00364 Biotin-requiring enzyme BF33_391 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BF33_391 PF02817 e3 binding domain BF33_3910 PF02863 Arginine repressor, C-terminal domain BF33_3910 PF01316 Arginine repressor, DNA binding domain BF33_3911 PF12729 Four helix bundle sensory module for signal transduction BF33_3911 PF00672 HAMP domain BF33_3911 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BF33_3912 PF00005 ABC transporter BF33_3913 PF00497 Bacterial extracellular solute-binding proteins, family 3 BF33_3914 PF00528 Binding-protein-dependent transport system inner membrane component BF33_3916 PF00355 Rieske [2Fe-2S] domain BF33_3916 PF01266 FAD dependent oxidoreductase BF33_3917 PF07690 Major Facilitator Superfamily BF33_3918 PF10127 RNA repair pathway DNA polymerase beta family BF33_392 PF07992 Pyridine nucleotide-disulphide oxidoreductase BF33_392 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BF33_3928 PF12728 Helix-turn-helix domain BF33_3930 PF07992 Pyridine nucleotide-disulphide oxidoreductase BF33_3931 PF01497 Periplasmic binding protein BF33_3932 PF01032 FecCD transport family BF33_3933 PF01032 FecCD transport family BF33_3934 PF00596 Class II Aldolase and Adducin N-terminal domain BF33_3936 PF01636 Phosphotransferase enzyme family BF33_3937 PF00578 AhpC/TSA family BF33_3938 PF13192 Thioredoxin domain BF33_3938 PF07992 Pyridine nucleotide-disulphide oxidoreductase BF33_3940 PF01546 Peptidase family M20/M25/M40 BF33_3940 PF07687 Peptidase dimerisation domain BF33_3943 PF13378 Enolase C-terminal domain-like BF33_3943 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BF33_3946 PF07308 Protein of unknown function (DUF1456) BF33_3948 PF01207 Dihydrouridine synthase (Dus) BF33_3949 PF01938 TRAM domain BF33_3949 PF05958 tRNA (Uracil-5-)-methyltransferase BF33_3949 PF02475 Met-10+ like-protein BF33_3950 PF07670 Nucleoside recognition BF33_3950 PF07662 Na+ dependent nucleoside transporter C-terminus BF33_3950 PF01773 Na+ dependent nucleoside transporter N-terminus BF33_3953 PF02073 Thermophilic metalloprotease (M29) BF33_3954 PF00893 Small Multidrug Resistance protein BF33_3955 PF00171 Aldehyde dehydrogenase family BF33_3956 PF00158 Sigma-54 interaction domain BF33_3957 PF00202 Aminotransferase class-III BF33_3958 PF13419 Haloacid dehalogenase-like hydrolase BF33_3959 PF00781 Diacylglycerol kinase catalytic domain BF33_3960 PF02637 GatB domain BF33_3960 PF02934 GatB/GatE catalytic domain BF33_3961 PF01425 Amidase BF33_3962 PF02686 Glu-tRNAGln amidotransferase C subunit BF33_3963 PF05360 yiaA/B two helix domain BF33_3964 PF01047 MarR family BF33_3965 PF17886 HSP20-like domain found in ArsA BF33_3965 PF02374 Anion-transporting ATPase BF33_3968 PF03180 NLPA lipoprotein BF33_3969 PF00528 Binding-protein-dependent transport system inner membrane component BF33_3970 PF00005 ABC transporter BF33_3970 PF09383 NIL domain BF33_3971 PF00857 Isochorismatase family BF33_3973 PF00171 Aldehyde dehydrogenase family BF33_3974 PF01925 Sulfite exporter TauE/SafE BF33_3975 PF07537 CamS sex pheromone cAM373 precursor BF33_3976 PF03119 NAD-dependent DNA ligase C4 zinc finger domain BF33_3976 PF12826 Helix-hairpin-helix motif BF33_3976 PF00533 BRCA1 C Terminus (BRCT) domain BF33_3976 PF01653 NAD-dependent DNA ligase adenylation domain BF33_3976 PF03120 NAD-dependent DNA ligase OB-fold domain BF33_3977 PF13361 UvrD-like helicase C-terminal domain BF33_3977 PF00580 UvrD/REP helicase N-terminal domain BF33_3978 PF01884 PcrB family BF33_3982 PF02844 Phosphoribosylglycinamide synthetase, N domain BF33_3982 PF02843 Phosphoribosylglycinamide synthetase, C domain BF33_3982 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain BF33_3983 PF01808 AICARFT/IMPCHase bienzyme BF33_3983 PF02142 MGS-like domain BF33_3984 PF00551 Formyl transferase BF33_3985 PF02769 AIR synthase related protein, C-terminal domain BF33_3985 PF00586 AIR synthase related protein, N-terminal domain BF33_3986 PF00156 Phosphoribosyl transferase domain BF33_3987 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain BF33_3987 PF02769 AIR synthase related protein, C-terminal domain BF33_3987 PF00586 AIR synthase related protein, N-terminal domain BF33_3989 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase BF33_3990 PF01259 SAICAR synthetase BF33_3991 PF00206 Lyase BF33_3991 PF10397 Adenylosuccinate lyase C-terminus BF33_3992 PF02222 ATP-grasp domain BF33_3992 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain BF33_3993 PF00731 AIR carboxylase BF33_3999 PF00892 EamA-like transporter family BF33_4 PF00471 Ribosomal protein L33 BF33_40 PF06898 Putative stage IV sporulation protein YqfD BF33_400 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain BF33_400 PF01276 Orn/Lys/Arg decarboxylase, major domain BF33_4004 PF00072 Response regulator receiver domain BF33_4004 PF00486 Transcriptional regulatory protein, C terminal BF33_4005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF33_4005 PF00512 His Kinase A (phospho-acceptor) domain BF33_4006 PF00005 ABC transporter BF33_4008 PF02673 Bacitracin resistance protein BacA BF33_401 PF05256 Uncharacterised protein family (UPF0223) BF33_4013 PF01323 DSBA-like thioredoxin domain BF33_4019 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF33_4019 PF00989 PAS fold BF33_4019 PF00512 His Kinase A (phospho-acceptor) domain BF33_4019 PF16736 Single Cache-like BF33_402 PF06335 Protein of unknown function (DUF1054) BF33_4020 PF00486 Transcriptional regulatory protein, C terminal BF33_4020 PF00072 Response regulator receiver domain BF33_4021 PF00860 Permease family BF33_4022 PF00117 Glutamine amidotransferase class-I BF33_4022 PF00958 GMP synthase C terminal domain BF33_4022 PF02540 NAD synthase BF33_4023 PF00118 TCP-1/cpn60 chaperonin family BF33_4024 PF00166 Chaperonin 10 Kd subunit BF33_4025 PF02517 CPBP intramembrane metalloprotease BF33_4027 PF02629 CoA binding domain BF33_4027 PF06971 Putative DNA-binding protein N-terminus BF33_4028 PF00005 ABC transporter BF33_4028 PF12848 ABC transporter BF33_4028 PF16326 ABC transporter C-terminal domain BF33_4029 PF00814 Glycoprotease family BF33_4030 PF00583 Acetyltransferase (GNAT) family BF33_4031 PF00814 Glycoprotease family BF33_4032 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE BF33_404 PF00459 Inositol monophosphatase family BF33_4050 PF17283 SprT-like zinc ribbon domain BF33_4050 PF10263 SprT-like family BF33_4051 PF00575 S1 RNA binding domain BF33_4051 PF17674 HHH domain BF33_4051 PF09371 Tex-like protein N-terminal domain BF33_4051 PF16921 Tex protein YqgF-like domain BF33_4052 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system BF33_4053 PF01402 Ribbon-helix-helix protein, copG family BF33_4054 PF01168 Alanine racemase, N-terminal domain BF33_4054 PF00842 Alanine racemase, C-terminal domain BF33_4056 PF01648 4'-phosphopantetheinyl transferase superfamily BF33_4057 PF03851 UV-endonuclease UvdE BF33_4058 PF01694 Rhomboid family BF33_4059 PF00270 DEAD/DEAH box helicase BF33_4059 PF00271 Helicase conserved C-terminal domain BF33_4060 PF08245 Mur ligase middle domain BF33_4060 PF02875 Mur ligase family, glutamate ligase domain BF33_4060 PF01225 Mur ligase family, catalytic domain BF33_4061 PF01820 D-ala D-ala ligase N-terminus BF33_4061 PF07478 D-ala D-ala ligase C-terminus BF33_4062 PF07690 Major Facilitator Superfamily BF33_4064 PF01557 Fumarylacetoacetate (FAA) hydrolase family BF33_4065 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BF33_407 PF14036 YlaH-like protein BF33_4072 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BF33_4072 PF00005 ABC transporter BF33_4073 PF00005 ABC transporter BF33_4073 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BF33_4074 PF00528 Binding-protein-dependent transport system inner membrane component BF33_4074 PF12911 N-terminal TM domain of oligopeptide transport permease C BF33_4075 PF00528 Binding-protein-dependent transport system inner membrane component BF33_4076 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BF33_4081 PF00005 ABC transporter BF33_4082 PF00196 Bacterial regulatory proteins, luxR family BF33_4082 PF00072 Response regulator receiver domain BF33_4083 PF07730 Histidine kinase BF33_4084 PF00005 ABC transporter BF33_4084 PF12848 ABC transporter BF33_4084 PF16326 ABC transporter C-terminal domain BF33_4088 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) BF33_4089 PF01026 TatD related DNase BF33_409 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) BF33_4092 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BF33_4092 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BF33_4094 PF00356 Bacterial regulatory proteins, lacI family BF33_4094 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BF33_4096 PF01553 Acyltransferase BF33_4098 PF14142 YrzO-like protein BF33_4099 PF00892 EamA-like transporter family BF33_41 PF02562 PhoH-like protein BF33_4100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BF33_4100 PF03466 LysR substrate binding domain BF33_4103 PF12727 PBP superfamily domain BF33_4103 PF12728 Helix-turn-helix domain BF33_4105 PF00528 Binding-protein-dependent transport system inner membrane component BF33_4106 PF06800 Sugar transport protein BF33_4107 PF04973 Nicotinamide mononucleotide transporter BF33_4108 PF03807 NADP oxidoreductase coenzyme F420-dependent BF33_4108 PF14748 Pyrroline-5-carboxylate reductase dimerisation BF33_4109 PF00248 Aldo/keto reductase family BF33_411 PF13638 PIN domain BF33_411 PF02562 PhoH-like protein BF33_4110 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BF33_4111 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BF33_4113 PF00440 Bacterial regulatory proteins, tetR family BF33_4115 PF12833 Helix-turn-helix domain BF33_4117 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BF33_4118 PF00005 ABC transporter BF33_4118 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BF33_4119 PF00005 ABC transporter BF33_4119 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BF33_4120 PF12911 N-terminal TM domain of oligopeptide transport permease C BF33_4120 PF00528 Binding-protein-dependent transport system inner membrane component BF33_4121 PF00528 Binding-protein-dependent transport system inner membrane component BF33_4124 PF07690 Major Facilitator Superfamily BF33_4126 PF07690 Major Facilitator Superfamily BF33_4127 PF01565 FAD binding domain BF33_413 PF07408 Protein of unknown function (DUF1507) BF33_4130 PF03180 NLPA lipoprotein BF33_4131 PF09383 NIL domain BF33_4131 PF00005 ABC transporter BF33_4132 PF00528 Binding-protein-dependent transport system inner membrane component BF33_4139 PF00326 Prolyl oligopeptidase family BF33_4139 PF07676 WD40-like Beta Propeller Repeat BF33_414 PF01098 Cell cycle protein BF33_4140 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain BF33_4140 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BF33_4141 PF02447 GntP family permease BF33_4142 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BF33_4142 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BF33_4143 PF07729 FCD domain BF33_4143 PF00392 Bacterial regulatory proteins, gntR family BF33_4144 PF00561 alpha/beta hydrolase fold BF33_4145 PF00144 Beta-lactamase BF33_4146 PF01380 SIS domain BF33_4147 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BF33_4147 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BF33_4147 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BF33_4147 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BF33_4148 PF07949 YbbR-like protein BF33_4149 PF02457 DisA bacterial checkpoint controller nucleotide-binding BF33_415 PF02785 Biotin carboxylase C-terminal domain BF33_415 PF00289 Biotin carboxylase, N-terminal domain BF33_415 PF02436 Conserved carboxylase domain BF33_415 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BF33_415 PF00682 HMGL-like BF33_415 PF00364 Biotin-requiring enzyme BF33_4150 PF00491 Arginase family BF33_4151 PF02595 Glycerate kinase family BF33_416 PF02628 Cytochrome oxidase assembly protein BF33_4166 PF01522 Polysaccharide deacetylase BF33_4167 PF14089 KinB-signalling pathway activation in sporulation BF33_4168 PF17898 Spore germination GerD central core domain BF33_4169 PF10609 NUBPL iron-transfer P-loop NTPase BF33_417 PF01040 UbiA prenyltransferase family BF33_4170 PF01520 N-acetylmuramoyl-L-alanine amidase BF33_4172 PF00380 Ribosomal protein S9/S16 BF33_4173 PF00572 Ribosomal protein L13 BF33_4174 PF01416 tRNA pseudouridine synthase BF33_4175 PF02361 Cobalt transport protein BF33_4176 PF00005 ABC transporter BF33_4177 PF00005 ABC transporter BF33_4178 PF01196 Ribosomal protein L17 BF33_4179 PF01000 RNA polymerase Rpb3/RpoA insert domain BF33_4179 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain BF33_4179 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain BF33_418 PF00116 Cytochrome C oxidase subunit II, periplasmic domain BF33_418 PF02790 Cytochrome C oxidase subunit II, transmembrane domain BF33_418 PF00034 Cytochrome c BF33_4180 PF00411 Ribosomal protein S11 BF33_4181 PF00416 Ribosomal protein S13/S18 BF33_4182 PF00444 Ribosomal protein L36 BF33_4183 PF01176 Translation initiation factor 1A / IF-1 BF33_4184 PF00557 Metallopeptidase family M24 BF33_4185 PF05191 Adenylate kinase, active site lid BF33_4186 PF00344 SecY translocase BF33_4187 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A BF33_4188 PF00327 Ribosomal protein L30p/L7e BF33_4189 PF00333 Ribosomal protein S5, N-terminal domain BF33_4189 PF03719 Ribosomal protein S5, C-terminal domain BF33_419 PF00115 Cytochrome C and Quinol oxidase polypeptide I BF33_4190 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast BF33_4191 PF00347 Ribosomal protein L6 BF33_4192 PF00410 Ribosomal protein S8 BF33_4193 PF00253 Ribosomal protein S14p/S29e BF33_4194 PF00673 ribosomal L5P family C-terminus BF33_4194 PF00281 Ribosomal protein L5 BF33_4195 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 BF33_4195 PF00467 KOW motif BF33_4196 PF00238 Ribosomal protein L14p/L23e BF33_4197 PF00366 Ribosomal protein S17 BF33_4198 PF00831 Ribosomal L29 protein BF33_4199 PF00252 Ribosomal protein L16p/L10e BF33_42 PF07698 7TM receptor with intracellular HD hydrolase BF33_42 PF07697 7TM-HD extracellular BF33_42 PF01966 HD domain BF33_420 PF00510 Cytochrome c oxidase subunit III BF33_4200 PF07650 KH domain BF33_4200 PF00189 Ribosomal protein S3, C-terminal domain BF33_4201 PF00237 Ribosomal protein L22p/L17e BF33_4202 PF00203 Ribosomal protein S19 BF33_4203 PF03947 Ribosomal Proteins L2, C-terminal domain BF33_4203 PF00181 Ribosomal Proteins L2, RNA binding domain BF33_4204 PF00276 Ribosomal protein L23 BF33_4205 PF00573 Ribosomal protein L4/L1 family BF33_4206 PF00297 Ribosomal protein L3 BF33_4207 PF00338 Ribosomal protein S10p/S20e BF33_4208 PF03144 Elongation factor Tu domain 2 BF33_4208 PF03143 Elongation factor Tu C-terminal domain BF33_4208 PF00009 Elongation factor Tu GTP binding domain BF33_4209 PF00009 Elongation factor Tu GTP binding domain BF33_4209 PF03764 Elongation factor G, domain IV BF33_4209 PF14492 Elongation Factor G, domain II BF33_4209 PF00679 Elongation factor G C-terminus BF33_4209 PF03144 Elongation factor Tu domain 2 BF33_421 PF03626 Prokaryotic Cytochrome C oxidase subunit IV BF33_4210 PF00177 Ribosomal protein S7p/S5e BF33_4211 PF00164 Ribosomal protein S12/S23 BF33_4212 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family BF33_4213 PF04997 RNA polymerase Rpb1, domain 1 BF33_4213 PF00623 RNA polymerase Rpb1, domain 2 BF33_4213 PF04983 RNA polymerase Rpb1, domain 3 BF33_4213 PF05000 RNA polymerase Rpb1, domain 4 BF33_4213 PF04998 RNA polymerase Rpb1, domain 5 BF33_4214 PF04563 RNA polymerase beta subunit BF33_4214 PF04561 RNA polymerase Rpb2, domain 2 BF33_4214 PF10385 RNA polymerase beta subunit external 1 domain BF33_4214 PF04560 RNA polymerase Rpb2, domain 7 BF33_4214 PF00562 RNA polymerase Rpb2, domain 6 BF33_4214 PF04565 RNA polymerase Rpb2, domain 3 BF33_4215 PF05175 Methyltransferase small domain BF33_4216 PF16320 Ribosomal protein L7/L12 dimerisation domain BF33_4216 PF00542 Ribosomal protein L7/L12 C-terminal domain BF33_4217 PF00466 Ribosomal protein L10 BF33_4218 PF00687 Ribosomal protein L1p/L10e family BF33_4219 PF03946 Ribosomal protein L11, N-terminal domain BF33_4219 PF00298 Ribosomal protein L11, RNA binding domain BF33_422 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) BF33_4220 PF00467 KOW motif BF33_4220 PF02357 Transcription termination factor nusG BF33_4221 PF00584 SecE/Sec61-gamma subunits of protein translocation complex BF33_4222 PF08281 Sigma-70, region 4 BF33_4222 PF04542 Sigma-70 region 2 BF33_4223 PF05991 YacP-like NYN domain BF33_4224 PF00588 SpoU rRNA Methylase family BF33_4224 PF08032 RNA 2'-O ribose methyltransferase substrate binding BF33_4225 PF00636 Ribonuclease III domain BF33_4226 PF09190 DALR domain BF33_4226 PF01406 tRNA synthetases class I (C) catalytic domain BF33_4227 PF06426 Serine acetyltransferase, N-terminal BF33_4227 PF00132 Bacterial transferase hexapeptide (six repeats) BF33_4228 PF00749 tRNA synthetases class I (E and Q), catalytic domain BF33_4229 PF02542 YgbB family BF33_423 PF00795 Carbon-nitrogen hydrolase BF33_4230 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase BF33_4232 PF02457 DisA bacterial checkpoint controller nucleotide-binding BF33_4232 PF10635 DisA bacterial checkpoint controller linker region BF33_4233 PF18073 Rubredoxin metal binding domain BF33_4234 PF17871 AAA lid domain BF33_4234 PF00004 ATPase family associated with various cellular activities (AAA) BF33_4234 PF02861 Clp amino terminal domain, pathogenicity island component BF33_4234 PF07724 AAA domain (Cdc48 subfamily) BF33_4234 PF10431 C-terminal, D2-small domain, of ClpB protein BF33_4235 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain BF33_4236 PF02151 UvrB/uvrC motif BF33_4237 PF05848 CtsR N-terminal HTH domain BF33_4237 PF17727 CtsR C-terminal dimerization domain BF33_424 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) BF33_425 PF00795 Carbon-nitrogen hydrolase BF33_4255 PF00152 tRNA synthetases class II (D, K and N) BF33_4255 PF01336 OB-fold nucleic acid binding domain BF33_4256 PF01207 Dihydrouridine synthase (Dus) BF33_4257 PF01381 Helix-turn-helix BF33_4258 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) BF33_4259 PF02152 Dihydroneopterin aldolase BF33_426 PF08868 YugN-like family BF33_4260 PF00809 Pterin binding enzyme BF33_4261 PF01063 Amino-transferase class IV BF33_4262 PF00117 Glutamine amidotransferase class-I BF33_4263 PF00425 chorismate binding enzyme BF33_4263 PF04715 Anthranilate synthase component I, N terminal region BF33_4264 PF00291 Pyridoxal-phosphate dependent enzyme BF33_4265 PF01430 Hsp33 protein BF33_4266 PF03309 Type III pantothenate kinase BF33_4267 PF17862 AAA+ lid domain BF33_4267 PF01434 Peptidase family M41 BF33_4267 PF00004 ATPase family associated with various cellular activities (AAA) BF33_4267 PF06480 FtsH Extracellular BF33_4269 PF01171 PP-loop family BF33_4269 PF09179 TilS substrate binding domain BF33_4269 PF11734 TilS substrate C-terminal domain BF33_427 PF00188 Cysteine-rich secretory protein family BF33_427 PF14504 CAP-associated N-terminal BF33_4270 PF07228 Stage II sporulation protein E (SpoIIE) BF33_4273 PF00575 S1 RNA binding domain BF33_4275 PF09578 Spore cortex protein YabQ (Spore_YabQ) BF33_4276 PF07873 YabP family BF33_4277 PF01479 S4 domain BF33_4278 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BF33_4278 PF03819 MazG nucleotide pyrophosphohydrolase domain BF33_4279 PF14667 Polysaccharide biosynthesis C-terminal domain BF33_4279 PF01943 Polysaccharide biosynthesis protein BF33_428 PF14071 Putative coat protein BF33_4280 PF15714 Stage V sporulation protein T C-terminal, transcription factor BF33_4280 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin BF33_4281 PF03461 TRCF domain BF33_4281 PF00271 Helicase conserved C-terminal domain BF33_4281 PF17757 UvrB interaction domain BF33_4281 PF00270 DEAD/DEAH box helicase BF33_4281 PF02559 CarD-like/TRCF domain BF33_4283 PF01195 Peptidyl-tRNA hydrolase BF33_4284 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase BF33_4284 PF14572 Phosphoribosyl synthetase-associated domain BF33_4285 PF00483 Nucleotidyl transferase BF33_4285 PF00132 Bacterial transferase hexapeptide (six repeats) BF33_4286 PF04026 SpoVG BF33_4287 PF01042 Endoribonuclease L-PSP BF33_4288 PF00156 Phosphoribosyl transferase domain BF33_4288 PF09182 Bacterial purine repressor, N-terminal BF33_4289 PF08544 GHMP kinases C terminal BF33_4289 PF00288 GHMP kinases N terminal domain BF33_429 PF14003 YlbE-like protein BF33_4290 PF00269 Small, acid-soluble spore proteins, alpha/beta type BF33_4291 PF06257 Biofilm formation stimulator VEG BF33_4292 PF05582 YabG peptidase U57 BF33_4293 PF00398 Ribosomal RNA adenine dimethylase BF33_4294 PF13662 Toprim domain BF33_4294 PF13331 Domain of unknown function (DUF4093) BF33_4295 PF01026 TatD related DNase BF33_4296 PF08264 Anticodon-binding domain of tRNA BF33_4296 PF01588 Putative tRNA binding domain BF33_4296 PF09334 tRNA synthetases class I (M) BF33_4297 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin BF33_4297 PF18277 AbrB C-terminal domain BF33_4298 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BF33_4299 PF01541 GIY-YIG catalytic domain BF33_43 PF02130 Uncharacterized protein family UPF0054 BF33_430 PF00300 Histidine phosphatase superfamily (branch 1) BF33_4300 PF05175 Methyltransferase small domain BF33_4301 PF06156 Initiation control protein YabA BF33_4302 PF04468 PSP1 C-terminal conserved region BF33_4303 PF09115 DNA polymerase III, delta subunit, C terminal BF33_4304 PF02223 Thymidylate kinase BF33_4305 PF01276 Orn/Lys/Arg decarboxylase, major domain BF33_4305 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain BF33_431 PF06133 Control of competence regulator ComK, YlbF/YmcA BF33_4313 PF07441 SigmaK-factor processing regulatory protein BofA BF33_4314 PF10704 Protein of unknown function (DUF2508) BF33_4315 PF02132 RecR protein BF33_4315 PF13662 Toprim domain BF33_4316 PF02575 YbaB/EbfC DNA-binding family BF33_4317 PF12169 DNA polymerase III subunits gamma and tau domain III BF33_4318 PF14437 MafB19-like deaminase BF33_4319 PF00857 Isochorismatase family BF33_432 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) BF33_4320 PF01712 Deoxynucleoside kinase BF33_4321 PF01712 Deoxynucleoside kinase BF33_4324 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BF33_4324 PF02403 Seryl-tRNA synthetase N-terminal domain BF33_4325 PF01174 SNO glutamine amidotransferase family BF33_4326 PF01680 SOR/SNZ family BF33_4327 PF00768 D-alanyl-D-alanine carboxypeptidase BF33_4327 PF07943 Penicillin-binding protein 5, C-terminal domain BF33_4328 PF00478 IMP dehydrogenase / GMP reductase domain BF33_4328 PF00571 CBS domain BF33_4329 PF14175 YaaC-like Protein BF33_4336 PF03989 DNA gyrase C-terminal domain, beta-propeller BF33_4336 PF00521 DNA gyrase/topoisomerase IV, subunit A BF33_4337 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF33_4337 PF01751 Toprim domain BF33_4337 PF00986 DNA gyrase B subunit, carboxyl terminus BF33_4337 PF00204 DNA gyrase B BF33_4338 PF02463 RecF/RecN/SMC N terminal domain BF33_4340 PF00712 DNA polymerase III beta subunit, N-terminal domain BF33_4340 PF02767 DNA polymerase III beta subunit, central domain BF33_4340 PF02768 DNA polymerase III beta subunit, C-terminal domain BF33_4341 PF00308 Bacterial dnaA protein BF33_4341 PF11638 DnaA N-terminal domain BF33_4341 PF08299 Bacterial dnaA protein helix-turn-helix BF33_4342 PF00468 Ribosomal protein L34 BF33_4343 PF00825 Ribonuclease P BF33_4344 PF02096 60Kd inner membrane protein BF33_4345 PF01424 R3H domain BF33_4345 PF14804 Jag N-terminus BF33_4346 PF10396 GTP-binding protein TrmE N-terminus BF33_4346 PF12631 MnmE helical domain BF33_4346 PF01926 50S ribosome-binding GTPase BF33_4347 PF01134 Glucose inhibited division protein A BF33_4347 PF13932 GidA associated domain BF33_4348 PF02527 rRNA small subunit methyltransferase G BF33_4349 PF02195 ParB-like nuclease domain BF33_4349 PF17762 HTH domain found in ParB protein BF33_435 PF07670 Nucleoside recognition BF33_4350 PF13614 AAA domain BF33_4351 PF17762 HTH domain found in ParB protein BF33_4351 PF02195 ParB-like nuclease domain BF33_4352 PF06866 Protein of unknown function (DUF1256) BF33_4353 PF00924 Mechanosensitive ion channel BF33_4354 PF06107 Bacterial protein of unknown function (DUF951) BF33_4355 PF01926 50S ribosome-binding GTPase BF33_4355 PF06071 Protein of unknown function (DUF933) BF33_4356 PF01250 Ribosomal protein S6 BF33_4357 PF00436 Single-strand binding protein family BF33_4358 PF01084 Ribosomal protein S18 BF33_4359 PF09991 Predicted membrane protein (DUF2232) BF33_436 PF01467 Cytidylyltransferase-like BF33_4360 PF02272 DHHA1 domain BF33_4360 PF01368 DHH family BF33_4361 PF03948 Ribosomal protein L9, C-terminal domain BF33_4361 PF01281 Ribosomal protein L9, N-terminal domain BF33_4362 PF00772 DnaB-like helicase N terminal domain BF33_4362 PF03796 DnaB-like helicase C terminal domain BF33_4363 PF00709 Adenylosuccinate synthetase BF33_4368 PF00486 Transcriptional regulatory protein, C terminal BF33_4368 PF00072 Response regulator receiver domain BF33_4369 PF00672 HAMP domain BF33_4369 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF33_4369 PF00512 His Kinase A (phospho-acceptor) domain BF33_4369 PF13426 PAS domain BF33_437 PF01734 Patatin-like phospholipase BF33_4370 PF07435 YycH protein BF33_4371 PF09648 YycH protein BF33_4372 PF00753 Metallo-beta-lactamase superfamily BF33_4373 PF13180 PDZ domain BF33_4375 PF02590 Predicted SPOUT methyltransferase BF33_4377 PF01432 Peptidase family M3 BF33_4377 PF08439 Oligopeptidase F BF33_4378 PF00478 IMP dehydrogenase / GMP reductase domain BF33_438 PF05362 Lon protease (S16) C-terminal proteolytic domain BF33_438 PF13180 PDZ domain BF33_4380 PF00270 DEAD/DEAH box helicase BF33_4380 PF00271 Helicase conserved C-terminal domain BF33_4380 PF03880 DbpA RNA binding domain BF33_4382 PF03006 Haemolysin-III related BF33_4383 PF16363 GDP-mannose 4,6 dehydratase BF33_4385 PF02293 AmiS/UreI family transporter BF33_4387 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BF33_4387 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BF33_4388 PF02898 Nitric oxide synthase, oxygenase domain BF33_4389 PF02028 BCCT, betaine/carnitine/choline family transporter BF33_439 PF05636 HIGH Nucleotidyl Transferase BF33_4390 PF07690 Major Facilitator Superfamily BF33_4391 PF06580 Histidine kinase BF33_4391 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF33_4391 PF07694 5TMR of 5TMR-LYT BF33_4391 PF13492 GAF domain BF33_4392 PF00072 Response regulator receiver domain BF33_4392 PF04397 LytTr DNA-binding domain BF33_4393 PF03788 LrgA family BF33_4394 PF04172 LrgB-like family BF33_4395 PF01594 AI-2E family transporter BF33_4396 PF01625 Peptide methionine sulfoxide reductase BF33_4396 PF01641 SelR domain BF33_4397 PF00873 AcrB/AcrD/AcrF family BF33_4398 PF00440 Bacterial regulatory proteins, tetR family BF33_4399 PF00535 Glycosyl transferase family 2 BF33_44 PF01219 Prokaryotic diacylglycerol kinase BF33_440 PF02620 Large ribosomal RNA subunit accumulation protein YceD BF33_4403 PF00005 ABC transporter BF33_4403 PF12848 ABC transporter BF33_4404 PF00535 Glycosyl transferase family 2 BF33_4406 PF03061 Thioesterase superfamily BF33_4408 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BF33_4409 PF03458 UPF0126 domain BF33_441 PF01783 Ribosomal L32p protein family BF33_4412 PF03808 Glycosyl transferase WecB/TagA/CpsF family BF33_4413 PF07690 Major Facilitator Superfamily BF33_4414 PF00072 Response regulator receiver domain BF33_4414 PF04397 LytTr DNA-binding domain BF33_4415 PF02554 Carbon starvation protein CstA BF33_4415 PF13722 5TM C-terminal transporter carbon starvation CstA BF33_4416 PF04328 Selenoprotein, putative BF33_4417 PF07694 5TMR of 5TMR-LYT BF33_4417 PF00990 Diguanylate cyclase, GGDEF domain BF33_4418 PF08543 Phosphomethylpyrimidine kinase BF33_4419 PF13185 GAF domain BF33_4419 PF07730 Histidine kinase BF33_4420 PF00196 Bacterial regulatory proteins, luxR family BF33_4420 PF00072 Response regulator receiver domain BF33_4421 PF02525 Flavodoxin-like fold BF33_4422 PF00027 Cyclic nucleotide-binding domain BF33_4423 PF13419 Haloacid dehalogenase-like hydrolase BF33_4425 PF01053 Cys/Met metabolism PLP-dependent enzyme BF33_4426 PF04204 Homoserine O-succinyltransferase BF33_4427 PF00742 Homoserine dehydrogenase BF33_4427 PF01842 ACT domain BF33_4427 PF03447 Homoserine dehydrogenase, NAD binding domain BF33_4429 PF00356 Bacterial regulatory proteins, lacI family BF33_4429 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BF33_443 PF00583 Acetyltransferase (GNAT) family BF33_4430 PF13472 GDSL-like Lipase/Acylhydrolase family BF33_4431 PF00005 ABC transporter BF33_4432 PF12679 ABC-2 family transporter protein BF33_4433 PF03167 Uracil DNA glycosylase superfamily BF33_4434 PF12823 Domain of unknown function (DUF3817) BF33_4436 PF00860 Permease family BF33_4437 PF02254 TrkA-N domain BF33_4437 PF07885 Ion channel BF33_4439 PF04241 Protein of unknown function (DUF423) BF33_444 PF08546 Ketopantoate reductase PanE/ApbA C terminal BF33_444 PF02558 Ketopantoate reductase PanE/ApbA BF33_4440 PF09671 Spore coat protein (Spore_GerQ) BF33_4441 PF07486 Cell Wall Hydrolase BF33_4442 PF00768 D-alanyl-D-alanine carboxypeptidase BF33_4442 PF07943 Penicillin-binding protein 5, C-terminal domain BF33_4444 PF01515 Phosphate acetyl/butaryl transferase BF33_4446 PF03099 Biotin/lipoate A/B protein ligase family BF33_4449 PF07293 Protein of unknown function (DUF1450) BF33_445 PF10079 Bacillithiol biosynthesis BshC BF33_4450 PF01032 FecCD transport family BF33_4451 PF01032 FecCD transport family BF33_4452 PF00005 ABC transporter BF33_4453 PF01497 Periplasmic binding protein BF33_4454 PF01966 HD domain BF33_4455 PF01361 Tautomerase enzyme BF33_4456 PF02163 Peptidase family M50 BF33_4457 PF08741 YwhD family BF33_4458 PF00912 Transglycosylase BF33_4458 PF00905 Penicillin binding protein transpeptidase domain BF33_4459 PF03009 Glycerophosphoryl diester phosphodiesterase family BF33_446 PF01795 MraW methylase family BF33_4460 PF13411 MerR HTH family regulatory protein BF33_4461 PF07690 Major Facilitator Superfamily BF33_4462 PF17284 Spermidine synthase tetramerisation domain BF33_4463 PF00491 Arginase family BF33_4466 PF02016 LD-carboxypeptidase N-terminal domain BF33_4466 PF17676 LD-carboxypeptidase C-terminal domain BF33_4467 PF09148 Domain of unknown function (DUF1934) BF33_4468 PF03485 Arginyl tRNA synthetase N terminal domain BF33_4468 PF05746 DALR anticodon binding domain BF33_4468 PF00750 tRNA synthetases class I (R) BF33_4469 PF08281 Sigma-70, region 4 BF33_4469 PF04542 Sigma-70 region 2 BF33_447 PF04977 Septum formation initiator BF33_4473 PF04389 Peptidase family M28 BF33_4473 PF02225 PA domain BF33_4475 PF00557 Metallopeptidase family M24 BF33_4476 PF00005 ABC transporter BF33_4477 PF00196 Bacterial regulatory proteins, luxR family BF33_4477 PF00072 Response regulator receiver domain BF33_4480 PF03707 Bacterial signalling protein N terminal repeat BF33_4480 PF00563 EAL domain BF33_4480 PF00990 Diguanylate cyclase, GGDEF domain BF33_4481 PF03851 UV-endonuclease UvdE BF33_4482 PF13091 PLD-like domain BF33_4483 PF13183 4Fe-4S dicluster domain BF33_4483 PF02754 Cysteine-rich domain BF33_4484 PF02803 Thiolase, C-terminal domain BF33_4484 PF00108 Thiolase, N-terminal domain BF33_4485 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BF33_4485 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BF33_4486 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BF33_4486 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BF33_4486 PF02770 Acyl-CoA dehydrogenase, middle domain BF33_4487 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BF33_4487 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BF33_4487 PF02770 Acyl-CoA dehydrogenase, middle domain BF33_4489 PF05066 HB1, ASXL, restriction endonuclease HTH domain BF33_449 PF03793 PASTA domain BF33_449 PF00905 Penicillin binding protein transpeptidase domain BF33_449 PF03717 Penicillin-binding Protein dimerisation domain BF33_4490 PF06418 CTP synthase N-terminus BF33_4490 PF00117 Glutamine amidotransferase class-I BF33_4491 PF10740 Domain of unknown function (DUF2529) BF33_4492 PF00072 Response regulator receiver domain BF33_4493 PF01116 Fructose-bisphosphate aldolase class-II BF33_4494 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BF33_4495 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded BF33_4496 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BF33_4496 PF07498 Rho termination factor, N-terminal domain BF33_4496 PF07497 Rho termination factor, RNA-binding domain BF33_4497 PF01197 Ribosomal protein L31 BF33_4498 PF00265 Thymidine kinase BF33_4499 PF03462 PCRF domain BF33_4499 PF00472 RF-1 domain BF33_45 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BF33_450 PF01225 Mur ligase family, catalytic domain BF33_450 PF08245 Mur ligase middle domain BF33_450 PF02875 Mur ligase family, glutamate ligase domain BF33_4500 PF13847 Methyltransferase domain BF33_4500 PF17827 PrmC N-terminal domain BF33_4501 PF09551 Stage II sporulation protein R (spore_II_R) BF33_4503 PF01300 Telomere recombination BF33_4503 PF03481 Putative GTP-binding controlling metal-binding BF33_4504 PF02659 Putative manganese efflux pump BF33_4506 PF01613 Flavin reductase like domain BF33_4507 PF07681 DoxX BF33_4508 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BF33_4509 PF01451 Low molecular weight phosphotyrosine protein phosphatase BF33_451 PF00953 Glycosyl transferase family 4 BF33_451 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 BF33_4510 PF02502 Ribose/Galactose Isomerase BF33_4511 PF04260 Protein of unknown function (DUF436) BF33_4512 PF00464 Serine hydroxymethyltransferase BF33_4515 PF03899 ATP synthase I chain BF33_4516 PF00119 ATP synthase A chain BF33_4517 PF00137 ATP synthase subunit C BF33_4518 PF00430 ATP synthase B/B' CF(0) BF33_4519 PF00213 ATP synthase delta (OSCP) subunit BF33_452 PF02875 Mur ligase family, glutamate ligase domain BF33_452 PF08245 Mur ligase middle domain BF33_4520 PF02874 ATP synthase alpha/beta family, beta-barrel domain BF33_4520 PF00306 ATP synthase alpha/beta chain, C terminal domain BF33_4520 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BF33_4521 PF00231 ATP synthase BF33_4522 PF02874 ATP synthase alpha/beta family, beta-barrel domain BF33_4522 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BF33_4523 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain BF33_4523 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain BF33_4526 PF03707 Bacterial signalling protein N terminal repeat BF33_4526 PF00990 Diguanylate cyclase, GGDEF domain BF33_4526 PF00563 EAL domain BF33_4527 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 BF33_4528 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit BF33_4529 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit BF33_453 PF01098 Cell cycle protein BF33_4530 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit BF33_4531 PF00146 NADH dehydrogenase BF33_4533 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 BF33_4534 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L BF33_4535 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BF33_4535 PF00361 Proton-conducting membrane transporter BF33_4535 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus BF33_4536 PF00361 Proton-conducting membrane transporter BF33_4537 PF00361 Proton-conducting membrane transporter BF33_4538 PF06612 Protein of unknown function (DUF1146) BF33_454 PF04101 Glycosyltransferase family 28 C-terminal domain BF33_454 PF03033 Glycosyltransferase family 28 N-terminal domain BF33_4540 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BF33_4541 PF08486 Stage II sporulation protein BF33_4542 PF00072 Response regulator receiver domain BF33_4542 PF04397 LytTr DNA-binding domain BF33_4543 PF00005 ABC transporter BF33_4545 PF01551 Peptidase family M23 BF33_4546 PF14883 Hypothetical glycosyl hydrolase family 13 BF33_4546 PF01522 Polysaccharide deacetylase BF33_4547 PF12116 Stage III sporulation protein D BF33_4549 PF01467 Cytidylyltransferase-like BF33_455 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain BF33_455 PF01565 FAD binding domain BF33_4550 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase BF33_4551 PF00535 Glycosyl transferase family 2 BF33_4551 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase BF33_4552 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase BF33_4553 PF01061 ABC-2 type transporter BF33_4554 PF08239 Bacterial SH3 domain BF33_4554 PF00005 ABC transporter BF33_4555 PF00535 Glycosyl transferase family 2 BF33_4555 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase BF33_4556 PF02350 UDP-N-acetylglucosamine 2-epimerase BF33_4557 PF07977 FabA-like domain BF33_4558 PF03816 Cell envelope-related transcriptional attenuator domain BF33_4559 PF16363 GDP-mannose 4,6 dehydratase BF33_456 PF08478 POTRA domain, FtsQ-type BF33_456 PF03799 Cell division protein FtsQ BF33_4560 PF00072 Response regulator receiver domain BF33_4560 PF00486 Transcriptional regulatory protein, C terminal BF33_4561 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF33_4561 PF16736 Single Cache-like BF33_4561 PF00989 PAS fold BF33_4561 PF00512 His Kinase A (phospho-acceptor) domain BF33_4564 PF07690 Major Facilitator Superfamily BF33_4566 PF00005 ABC transporter BF33_4567 PF12704 MacB-like periplasmic core domain BF33_4567 PF02687 FtsX-like permease family BF33_4568 PF04893 Yip1 domain BF33_4569 PF04893 Yip1 domain BF33_457 PF02491 SHS2 domain inserted in FTSA BF33_4570 PF04542 Sigma-70 region 2 BF33_4570 PF04545 Sigma-70, region 4 BF33_4576 PF00176 SNF2 family N-terminal domain BF33_4576 PF00271 Helicase conserved C-terminal domain BF33_4576 PF12419 SNF2 Helicase protein BF33_4577 PF04434 SWIM zinc finger BF33_458 PF00091 Tubulin/FtsZ family, GTPase domain BF33_458 PF12327 FtsZ family, C-terminal domain BF33_4582 PF01476 LysM domain BF33_4582 PF06725 3D domain BF33_4583 PF02028 BCCT, betaine/carnitine/choline family transporter BF33_4587 PF01773 Na+ dependent nucleoside transporter N-terminus BF33_4587 PF07662 Na+ dependent nucleoside transporter C-terminus BF33_4588 PF00877 NlpC/P60 family BF33_4588 PF01476 LysM domain BF33_4589 PF01063 Amino-transferase class IV BF33_459 PF03419 Sporulation factor SpoIIGA BF33_4590 PF00884 Sulfatase BF33_4592 PF09988 Uncharacterized metal-binding protein (DUF2227) BF33_4594 PF02652 L-lactate permease BF33_4596 PF02652 L-lactate permease BF33_4597 PF13667 ThiC-associated domain BF33_4597 PF01964 Radical SAM ThiC family BF33_4598 PF02040 Arsenical pump membrane protein BF33_4599 PF02322 Cytochrome bd terminal oxidase subunit II BF33_46 PF01926 50S ribosome-binding GTPase BF33_46 PF07650 KH domain BF33_460 PF04545 Sigma-70, region 4 BF33_460 PF04542 Sigma-70 region 2 BF33_4600 PF01654 Cytochrome bd terminal oxidase subunit I BF33_4603 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BF33_4603 PF03466 LysR substrate binding domain BF33_4605 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BF33_4607 PF00375 Sodium:dicarboxylate symporter family BF33_4608 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BF33_4609 PF02378 Phosphotransferase system, EIIC BF33_461 PF04542 Sigma-70 region 2 BF33_461 PF04545 Sigma-70, region 4 BF33_461 PF04539 Sigma-70 region 3 BF33_4610 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit BF33_4611 PF02675 S-adenosylmethionine decarboxylase BF33_4613 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BF33_4614 PF02378 Phosphotransferase system, EIIC BF33_4615 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit BF33_4616 PF11975 Family 4 glycosyl hydrolase C-terminal domain BF33_4616 PF02056 Family 4 glycosyl hydrolase BF33_4617 PF04794 YdjC-like protein BF33_4618 PF02417 Chromate transporter BF33_462 PF05239 PRC-barrel domain BF33_4620 PF00874 PRD domain BF33_4620 PF00158 Sigma-54 interaction domain BF33_4620 PF03610 PTS system fructose IIA component BF33_4621 PF11738 Protein of unknown function (DUF3298) BF33_4621 PF01522 Polysaccharide deacetylase BF33_4621 PF13739 Deacetylase PdaC BF33_4622 PF00953 Glycosyl transferase family 4 BF33_4623 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BF33_4623 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BF33_4623 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BF33_4624 PF02350 UDP-N-acetylglucosamine 2-epimerase BF33_4625 PF03816 Cell envelope-related transcriptional attenuator domain BF33_4626 PF09186 Domain of unknown function (DUF1949) BF33_4626 PF01205 Uncharacterized protein family UPF0029 BF33_4627 PF02645 Uncharacterised protein, DegV family COG1307 BF33_4628 PF01638 HxlR-like helix-turn-helix BF33_4629 PF00877 NlpC/P60 family BF33_4629 PF01476 LysM domain BF33_4630 PF04851 Type III restriction enzyme, res subunit BF33_4630 PF00271 Helicase conserved C-terminal domain BF33_4632 PF00313 'Cold-shock' DNA-binding domain BF33_4633 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein BF33_4633 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus BF33_4634 PF07517 SecA DEAD-like domain BF33_4634 PF02810 SEC-C motif BF33_4634 PF07516 SecA Wing and Scaffold domain BF33_4634 PF01043 SecA preprotein cross-linking domain BF33_4635 PF00472 RF-1 domain BF33_4635 PF03462 PCRF domain BF33_4636 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BF33_4637 PF00005 ABC transporter BF33_4638 PF18075 FtsX extracellular domain BF33_4638 PF02687 FtsX-like permease family BF33_4639 PF03572 Peptidase family S41 BF33_4639 PF17820 PDZ domain BF33_4639 PF01471 Putative peptidoglycan binding domain BF33_464 PF01168 Alanine racemase, N-terminal domain BF33_4640 PF17820 PDZ domain BF33_4641 PF00005 ABC transporter BF33_4641 PF00664 ABC transporter transmembrane region BF33_4642 PF01906 Putative heavy-metal-binding BF33_4644 PF03358 NADPH-dependent FMN reductase BF33_4645 PF09278 MerR, DNA binding BF33_4645 PF00376 MerR family regulatory protein BF33_4646 PF03466 LysR substrate binding domain BF33_4646 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BF33_4647 PF03601 Conserved hypothetical protein 698 BF33_465 PF04472 Cell division protein SepF BF33_4653 PF13411 MerR HTH family regulatory protein BF33_4653 PF07739 TipAS antibiotic-recognition domain BF33_4656 PF17757 UvrB interaction domain BF33_4656 PF04851 Type III restriction enzyme, res subunit BF33_4656 PF00271 Helicase conserved C-terminal domain BF33_4656 PF02151 UvrB/uvrC motif BF33_4656 PF12344 Ultra-violet resistance protein B BF33_4657 PF17755 UvrA DNA-binding domain BF33_4657 PF17760 UvrA interaction domain BF33_4657 PF00005 ABC transporter BF33_4659 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV BF33_466 PF02325 YGGT family BF33_4660 PF07475 HPr Serine kinase C-terminal domain BF33_4660 PF02603 HPr Serine kinase N terminus BF33_4661 PF01790 Prolipoprotein diacylglyceryl transferase BF33_4662 PF13419 Haloacid dehalogenase-like hydrolase BF33_4663 PF14602 Hexapeptide repeat of succinyl-transferase BF33_4665 PF07992 Pyridine nucleotide-disulphide oxidoreductase BF33_4667 PF00293 NUDIX domain BF33_4668 PF03668 P-loop ATPase protein family BF33_4669 PF01933 Uncharacterised protein family UPF0052 BF33_467 PF01479 S4 domain BF33_467 PF17774 Putative RNA-binding domain in YlmH BF33_4670 PF02650 WhiA C-terminal HTH domain BF33_4670 PF14527 WhiA LAGLIDADG-like domain BF33_4670 PF10298 WhiA N-terminal LAGLIDADG-like domain BF33_4671 PF00381 PTS HPr component phosphorylation site BF33_4672 PF00574 Clp protease BF33_4673 PF04239 Protein of unknown function (DUF421) BF33_4675 PF03862 SpoVAC/SpoVAEB sporulation membrane protein BF33_4676 PF07451 Stage V sporulation protein AD (SpoVAD) BF33_4677 PF03862 SpoVAC/SpoVAEB sporulation membrane protein BF33_468 PF05103 DivIVA protein BF33_4681 PF04552 Sigma-54, DNA binding domain BF33_4681 PF04963 Sigma-54 factor, core binding domain BF33_4681 PF00309 Sigma-54 factor, Activator interacting domain (AID) BF33_4683 PF04198 Putative sugar-binding domain BF33_4684 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BF33_4684 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BF33_4685 PF00162 Phosphoglycerate kinase BF33_4686 PF00121 Triosephosphate isomerase BF33_4687 PF06415 BPG-independent PGAM N-terminus (iPGM_N) BF33_4687 PF01676 Metalloenzyme superfamily BF33_4688 PF00113 Enolase, C-terminal TIM barrel domain BF33_4688 PF03952 Enolase, N-terminal domain BF33_4689 PF01156 Inosine-uridine preferring nucleoside hydrolase BF33_469 PF08264 Anticodon-binding domain of tRNA BF33_469 PF00133 tRNA synthetases class I (I, L, M and V) BF33_469 PF06827 Zinc finger found in FPG and IleRS BF33_4690 PF03788 LrgA family BF33_4691 PF04172 LrgB-like family BF33_4692 PF03840 Preprotein translocase SecG subunit BF33_4693 PF12146 Serine aminopeptidase, S33 BF33_4694 PF08206 Ribonuclease B OB domain BF33_4694 PF00773 RNB domain BF33_4694 PF17876 Cold shock domain BF33_4694 PF00575 S1 RNA binding domain BF33_4695 PF01668 SmpB protein BF33_4697 PF00072 Response regulator receiver domain BF33_4697 PF00486 Transcriptional regulatory protein, C terminal BF33_4699 PF01032 FecCD transport family BF33_4700 PF01032 FecCD transport family BF33_4701 PF00005 ABC transporter BF33_4704 PF06146 Phosphate-starvation-inducible E BF33_4705 PF13302 Acetyltransferase (GNAT) domain BF33_4708 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BF33_4709 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BF33_471 PF01252 Signal peptidase (SPase) II BF33_4711 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BF33_4711 PF17202 Single cache domain 3 BF33_4711 PF00672 HAMP domain BF33_4715 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain BF33_4715 PF01565 FAD binding domain BF33_4716 PF01479 S4 domain BF33_4716 PF00579 tRNA synthetases class I (W and Y) BF33_4717 PF07992 Pyridine nucleotide-disulphide oxidoreductase BF33_4718 PF07849 Protein of unknown function (DUF1641) BF33_4719 PF01638 HxlR-like helix-turn-helix BF33_472 PF01479 S4 domain BF33_472 PF00849 RNA pseudouridylate synthase BF33_4720 PF07690 Major Facilitator Superfamily BF33_4721 PF00248 Aldo/keto reductase family BF33_4725 PF13460 NAD(P)H-binding BF33_4726 PF01235 Sodium:alanine symporter family BF33_4727 PF01773 Na+ dependent nucleoside transporter N-terminus BF33_4727 PF07662 Na+ dependent nucleoside transporter C-terminus BF33_4728 PF07662 Na+ dependent nucleoside transporter C-terminus BF33_4728 PF01773 Na+ dependent nucleoside transporter N-terminus BF33_473 PF00156 Phosphoribosyl transferase domain BF33_4730 PF00210 Ferritin-like domain BF33_4732 PF03641 Possible lysine decarboxylase BF33_4735 PF00210 Ferritin-like domain BF33_4736 PF01235 Sodium:alanine symporter family BF33_4737 PF02080 TrkA-C domain BF33_4738 PF00999 Sodium/hydrogen exchanger family BF33_474 PF00860 Permease family BF33_4740 PF01047 MarR family BF33_4741 PF17954 Quercetinase C-terminal cupin domain BF33_4741 PF02678 Pirin BF33_4742 PF02868 Thermolysin metallopeptidase, alpha-helical domain BF33_4742 PF01447 Thermolysin metallopeptidase, catalytic domain BF33_4742 PF03413 Peptidase propeptide and YPEB domain BF33_4742 PF07504 Fungalysin/Thermolysin Propeptide Motif BF33_4743 PF01883 Iron-sulfur cluster assembly protein BF33_4744 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BF33_4744 PF00672 HAMP domain BF33_4744 PF02743 Cache domain BF33_4745 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BF33_4745 PF00672 HAMP domain BF33_4745 PF02743 Cache domain BF33_4747 PF08264 Anticodon-binding domain of tRNA BF33_4747 PF09334 tRNA synthetases class I (M) BF33_4749 PF00512 His Kinase A (phospho-acceptor) domain BF33_4749 PF16736 Single Cache-like BF33_4749 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF33_4749 PF00989 PAS fold BF33_475 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BF33_475 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BF33_4750 PF00486 Transcriptional regulatory protein, C terminal BF33_4750 PF00072 Response regulator receiver domain BF33_4751 PF17969 L,D-transpeptidase C-terminal domain BF33_4751 PF03734 L,D-transpeptidase catalytic domain BF33_4753 PF09335 SNARE associated Golgi protein BF33_476 PF01979 Amidohydrolase family BF33_4761 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BF33_4761 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BF33_4763 PF02096 60Kd inner membrane protein BF33_4765 PF13520 Amino acid permease BF33_4766 PF07690 Major Facilitator Superfamily BF33_477 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain BF33_477 PF00117 Glutamine amidotransferase class-I BF33_4770 PF02743 Cache domain BF33_4770 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BF33_4770 PF00672 HAMP domain BF33_4771 PF01910 Thiamine-binding protein BF33_4772 PF10835 Protein of unknown function (DUF2573) BF33_4773 PF01619 Proline dehydrogenase BF33_4774 PF00768 D-alanyl-D-alanine carboxypeptidase BF33_4774 PF07943 Penicillin-binding protein 5, C-terminal domain BF33_4775 PF14115 YuzL-like protein BF33_4776 PF00378 Enoyl-CoA hydratase/isomerase BF33_4776 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BF33_4776 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BF33_4777 PF02803 Thiolase, C-terminal domain BF33_4777 PF00108 Thiolase, N-terminal domain BF33_4778 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BF33_4778 PF02770 Acyl-CoA dehydrogenase, middle domain BF33_4778 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BF33_4779 PF00753 Metallo-beta-lactamase superfamily BF33_478 PF02142 MGS-like domain BF33_478 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BF33_478 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BF33_4780 PF00440 Bacterial regulatory proteins, tetR family BF33_4780 PF13305 Tetracyclin repressor-like, C-terminal domain BF33_4781 PF08671 Anti-repressor SinI BF33_4781 PF01381 Helix-turn-helix BF33_4787 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BF33_4787 PF00056 lactate/malate dehydrogenase, NAD binding domain BF33_479 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B BF33_479 PF00175 Oxidoreductase NAD-binding domain BF33_4795 PF03960 ArsC family BF33_4796 PF01597 Glycine cleavage H-protein BF33_4797 PF01751 Toprim domain BF33_4798 PF00085 Thioredoxin BF33_48 PF11967 Recombination protein O N terminal BF33_48 PF02565 Recombination protein O C terminal BF33_480 PF01180 Dihydroorotate dehydrogenase BF33_4800 PF09383 NIL domain BF33_4800 PF00005 ABC transporter BF33_4801 PF00528 Binding-protein-dependent transport system inner membrane component BF33_4802 PF03180 NLPA lipoprotein BF33_4803 PF03180 NLPA lipoprotein BF33_4804 PF00005 ABC transporter BF33_4805 PF01458 Uncharacterized protein family (UPF0051) BF33_4806 PF00266 Aminotransferase class-V BF33_4807 PF01592 NifU-like N terminal domain BF33_4808 PF01458 Uncharacterized protein family (UPF0051) BF33_4809 PF02872 5'-nucleotidase, C-terminal domain BF33_481 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family BF33_4810 PF08827 Domain of unknown function (DUF1805) BF33_4812 PF01551 Peptidase family M23 BF33_4813 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family BF33_4813 PF04055 Radical SAM superfamily BF33_4817 PF10086 YhfC intramembrane metalloprotease BF33_4818 PF07739 TipAS antibiotic-recognition domain BF33_4818 PF13411 MerR HTH family regulatory protein BF33_4819 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) BF33_482 PF00156 Phosphoribosyl transferase domain BF33_4820 PF06265 Protein of unknown function (DUF1027) BF33_4823 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded BF33_4824 PF01934 Protein of unknown function DUF86 BF33_4826 PF13344 Haloacid dehalogenase-like hydrolase BF33_4828 PF02525 Flavodoxin-like fold BF33_4830 PF04608 Phosphatidylglycerophosphatase A BF33_4833 PF01106 NifU-like domain BF33_4834 PF07315 Protein of unknown function (DUF1462) BF33_4838 PF08274 PhnA Zinc-Ribbon BF33_4838 PF03831 PhnA domain BF33_4839 PF03649 Uncharacterised protein family (UPF0014) BF33_4840 PF00005 ABC transporter BF33_4840 PF03412 Peptidase C39 family BF33_4840 PF00664 ABC transporter transmembrane region BF33_4841 PF07992 Pyridine nucleotide-disulphide oxidoreductase BF33_4842 PF07293 Protein of unknown function (DUF1450) BF33_4843 PF01678 Diaminopimelate epimerase BF33_4844 PF01521 Iron-sulphur cluster biosynthesis BF33_4846 PF04463 Protein of unknown function (DUF523) BF33_4849 PF06445 GyrI-like small molecule binding domain BF33_4851 PF07992 Pyridine nucleotide-disulphide oxidoreductase BF33_4852 PF07992 Pyridine nucleotide-disulphide oxidoreductase BF33_4853 PF00293 NUDIX domain BF33_4853 PF13344 Haloacid dehalogenase-like hydrolase BF33_4855 PF06725 3D domain BF33_4856 PF00883 Cytosol aminopeptidase family, catalytic domain BF33_4856 PF02789 Cytosol aminopeptidase family, N-terminal domain BF33_4857 PF02457 DisA bacterial checkpoint controller nucleotide-binding BF33_4857 PF10372 Bacterial membrane-spanning protein N-terminus BF33_4858 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BF33_4858 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BF33_4858 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BF33_4858 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BF33_4859 PF00483 Nucleotidyl transferase BF33_4860 PF02632 BioY family BF33_4862 PF03061 Thioesterase superfamily BF33_4863 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BF33_4863 PF03129 Anticodon binding domain BF33_4866 PF03600 Citrate transporter BF33_4867 PF00929 Exonuclease BF33_4868 PF08810 Kinase associated protein B BF33_4871 PF00155 Aminotransferase class I and II BF33_4873 PF00561 alpha/beta hydrolase fold BF33_4873 PF08386 TAP-like protein BF33_4874 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BF33_4874 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BF33_4875 PF01037 Lrp/AsnC ligand binding domain BF33_4876 PF00155 Aminotransferase class I and II BF33_4877 PF00575 S1 RNA binding domain BF33_4878 PF04070 Domain of unknown function (DUF378) BF33_4879 PF00342 Phosphoglucose isomerase BF33_488 PF00557 Metallopeptidase family M24 BF33_488 PF01321 Creatinase/Prolidase N-terminal domain BF33_4880 PF07885 Ion channel BF33_4880 PF02254 TrkA-N domain BF33_4881 PF08868 YugN-like family BF33_4882 PF02308 MgtC family BF33_4890 PF05697 Bacterial trigger factor protein (TF) BF33_4890 PF05698 Bacterial trigger factor protein (TF) C-terminus BF33_49 PF08279 HTH domain BF33_49 PF00571 CBS domain BF33_490 PF00689 Cation transporting ATPase, C-terminus BF33_490 PF00690 Cation transporter/ATPase, N-terminus BF33_4909 PF04542 Sigma-70 region 2 BF33_4909 PF08281 Sigma-70, region 4 BF33_491 PF08340 Domain of unknown function (DUF1732) BF33_491 PF03755 YicC-like family, N-terminal region BF33_4911 PF00056 lactate/malate dehydrogenase, NAD binding domain BF33_4911 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BF33_4913 PF00128 Alpha amylase, catalytic domain BF33_4913 PF02806 Alpha amylase, C-terminal all-beta domain BF33_4913 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BF33_4914 PF00483 Nucleotidyl transferase BF33_4915 PF00483 Nucleotidyl transferase BF33_4916 PF00534 Glycosyl transferases group 1 BF33_4916 PF08323 Starch synthase catalytic domain BF33_4917 PF00343 Carbohydrate phosphorylase BF33_492 PF04025 Domain of unknown function (DUF370) BF33_4921 PF00313 'Cold-shock' DNA-binding domain BF33_4922 PF01258 Prokaryotic dksA/traR C4-type zinc finger BF33_4923 PF01040 UbiA prenyltransferase family BF33_4924 PF00425 chorismate binding enzyme BF33_4925 PF16582 Middle domain of thiamine pyrophosphate BF33_4925 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BF33_4925 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BF33_4926 PF00561 alpha/beta hydrolase fold BF33_4927 PF00378 Enoyl-CoA hydratase/isomerase BF33_4928 PF00501 AMP-binding enzyme BF33_4928 PF13193 AMP-binding enzyme C-terminal domain BF33_4929 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BF33_4929 PF13378 Enolase C-terminal domain-like BF33_493 PF00625 Guanylate kinase BF33_4930 PF00486 Transcriptional regulatory protein, C terminal BF33_4930 PF00072 Response regulator receiver domain BF33_4931 PF00512 His Kinase A (phospho-acceptor) domain BF33_4931 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF33_4932 PF02557 D-alanyl-D-alanine carboxypeptidase BF33_4935 PF01979 Amidohydrolase family BF33_4936 PF03841 L-seryl-tRNA selenium transferase BF33_4937 PF07071 KDGP aldolase BF33_494 PF01192 RNA polymerase Rpb6 BF33_4940 PF02447 GntP family permease BF33_4941 PF02447 GntP family permease BF33_4943 PF02687 FtsX-like permease family BF33_4944 PF00005 ABC transporter BF33_4945 PF02687 FtsX-like permease family BF33_4946 PF02687 FtsX-like permease family BF33_4947 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF33_4948 PF00486 Transcriptional regulatory protein, C terminal BF33_4948 PF00072 Response regulator receiver domain BF33_4949 PF06445 GyrI-like small molecule binding domain BF33_4949 PF12833 Helix-turn-helix domain BF33_495 PF04127 DNA / pantothenate metabolism flavoprotein BF33_495 PF02441 Flavoprotein BF33_4950 PF00005 ABC transporter BF33_4951 PF02687 FtsX-like permease family BF33_4952 PF00398 Ribosomal RNA adenine dimethylase BF33_4953 PF09335 SNARE associated Golgi protein BF33_4958 PF00781 Diacylglycerol kinase catalytic domain BF33_496 PF04851 Type III restriction enzyme, res subunit BF33_496 PF18074 Primosomal protein N C-terminal domain BF33_496 PF17764 3′ DNA-binding domain (3′BD) BF33_496 PF18319 PriA DNA helicase Cys-rich region (CRR) domain BF33_496 PF00271 Helicase conserved C-terminal domain BF33_4964 PF00486 Transcriptional regulatory protein, C terminal BF33_4964 PF00072 Response regulator receiver domain BF33_4965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF33_4965 PF00512 His Kinase A (phospho-acceptor) domain BF33_4965 PF00672 HAMP domain BF33_4966 PF09515 Thiamine transporter protein (Thia_YuaJ) BF33_4968 PF02421 Ferrous iron transport protein B BF33_4968 PF17910 FeoB cytosolic helical domain BF33_4968 PF07664 Ferrous iron transport protein B C terminus BF33_4968 PF07670 Nucleoside recognition BF33_497 PF01327 Polypeptide deformylase BF33_4973 PF04012 PspA/IM30 family BF33_4978 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BF33_4978 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BF33_498 PF00551 Formyl transferase BF33_498 PF02911 Formyl transferase, C-terminal domain BF33_4981 PF10676 Spore germination protein gerPA/gerPF BF33_4982 PF02322 Cytochrome bd terminal oxidase subunit II BF33_4983 PF01654 Cytochrome bd terminal oxidase subunit I BF33_4984 PF01809 Putative membrane protein insertion efficiency factor BF33_4985 PF00484 Carbonic anhydrase BF33_4986 PF02664 S-Ribosylhomocysteinase (LuxS) BF33_499 PF01189 16S rRNA methyltransferase RsmB/F BF33_499 PF01029 NusB family BF33_4991 PF00293 NUDIX domain BF33_4993 PF13419 Haloacid dehalogenase-like hydrolase BF33_4996 PF00528 Binding-protein-dependent transport system inner membrane component BF33_4997 PF00005 ABC transporter BF33_5 PF16244 Domain of unknown function (DUF4901) BF33_50 PF03618 Kinase/pyrophosphorylase BF33_500 PF04055 Radical SAM superfamily BF33_5001 PF00884 Sulfatase BF33_5002 PF08386 TAP-like protein BF33_5002 PF00561 alpha/beta hydrolase fold BF33_5003 PF08447 PAS fold BF33_5003 PF00989 PAS fold BF33_5003 PF00512 His Kinase A (phospho-acceptor) domain BF33_5003 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF33_5004 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF33_5004 PF00512 His Kinase A (phospho-acceptor) domain BF33_5004 PF00989 PAS fold BF33_5004 PF13188 PAS domain BF33_5004 PF13426 PAS domain BF33_5005 PF01784 NIF3 (NGG1p interacting factor 3) BF33_5011 PF01293 Phosphoenolpyruvate carboxykinase BF33_5012 PF00438 S-adenosylmethionine synthetase, N-terminal domain BF33_5012 PF02773 S-adenosylmethionine synthetase, C-terminal domain BF33_5012 PF02772 S-adenosylmethionine synthetase, central domain BF33_5015 PF00994 Probable molybdopterin binding domain BF33_5016 PF12804 MobA-like NTP transferase domain BF33_5017 PF13439 Glycosyltransferase Family 4 BF33_5017 PF00534 Glycosyl transferases group 1 BF33_5018 PF01569 PAP2 superfamily BF33_5019 PF00132 Bacterial transferase hexapeptide (six repeats) BF33_502 PF03793 PASTA domain BF33_502 PF00069 Protein kinase domain BF33_5020 PF12146 Serine aminopeptidase, S33 BF33_5021 PF10776 Protein of unknown function (DUF2600) BF33_5024 PF01177 Asp/Glu/Hydantoin racemase BF33_5026 PF00005 ABC transporter BF33_5027 PF06962 Putative rRNA methylase BF33_5028 PF04055 Radical SAM superfamily BF33_5028 PF16199 Radical_SAM C-terminal domain BF33_5029 PF10732 Protein of unknown function (DUF2524) BF33_503 PF03193 RsgA GTPase BF33_503 PF16745 RsgA N-terminal domain BF33_5031 PF04235 Protein of unknown function (DUF418) BF33_5031 PF07786 Protein of unknown function (DUF1624) BF33_5032 PF00005 ABC transporter BF33_5034 PF00589 Phage integrase family BF33_5035 PF02080 TrkA-C domain BF33_5036 PF00999 Sodium/hydrogen exchanger family BF33_5037 PF07690 Major Facilitator Superfamily BF33_5038 PF08264 Anticodon-binding domain of tRNA BF33_5038 PF13603 Leucyl-tRNA synthetase, Domain 2 BF33_5038 PF09334 tRNA synthetases class I (M) BF33_5038 PF00133 tRNA synthetases class I (I, L, M and V) BF33_504 PF00834 Ribulose-phosphate 3 epimerase family BF33_5043 PF03845 Spore germination protein BF33_5044 PF03323 Bacillus/Clostridium GerA spore germination protein BF33_5045 PF00561 alpha/beta hydrolase fold BF33_5047 PF00581 Rhodanese-like domain BF33_505 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain BF33_505 PF04263 Thiamin pyrophosphokinase, catalytic domain BF33_5051 PF06463 Molybdenum Cofactor Synthesis C BF33_5051 PF04055 Radical SAM superfamily BF33_5052 PF00899 ThiF family BF33_5053 PF01967 MoaC family BF33_5054 PF03453 MoeA N-terminal region (domain I and II) BF33_5054 PF03454 MoeA C-terminal region (domain IV) BF33_5054 PF00994 Probable molybdopterin binding domain BF33_5055 PF03205 Molybdopterin guanine dinucleotide synthesis protein B BF33_5056 PF02391 MoaE protein BF33_5059 PF06800 Sugar transport protein BF33_506 PF00830 Ribosomal L28 family BF33_5061 PF02559 CarD-like/TRCF domain BF33_5063 PF10957 Sporulation protein Cse60 BF33_5065 PF08327 Activator of Hsp90 ATPase homolog 1-like protein BF33_5066 PF01022 Bacterial regulatory protein, arsR family BF33_5067 PF07690 Major Facilitator Superfamily BF33_5069 PF14667 Polysaccharide biosynthesis C-terminal domain BF33_5069 PF01943 Polysaccharide biosynthesis protein BF33_507 PF03780 Asp23 family, cell envelope-related function BF33_5070 PF00849 RNA pseudouridylate synthase BF33_5070 PF01479 S4 domain BF33_5071 PF08220 DeoR-like helix-turn-helix domain BF33_5072 PF01546 Peptidase family M20/M25/M40 BF33_5073 PF02834 LigT like Phosphoesterase BF33_5074 PF17999 Pullulanase N1-terminal domain BF33_5074 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BF33_5074 PF00128 Alpha amylase, catalytic domain BF33_5075 PF01636 Phosphotransferase enzyme family BF33_5076 PF14165 YtzH-like protein BF33_5077 PF02390 Putative methyltransferase BF33_5078 PF00753 Metallo-beta-lactamase superfamily BF33_508 PF13684 Dihydroxyacetone kinase family BF33_508 PF02734 DAK2 domain BF33_5080 PF05343 M42 glutamyl aminopeptidase BF33_5081 PF01931 Protein of unknown function DUF84 BF33_5082 PF00085 Thioredoxin BF33_5083 PF07285 Protein of unknown function (DUF1444) BF33_5084 PF14794 Domain of unknown function (DUF4479) BF33_5084 PF01588 Putative tRNA binding domain BF33_5086 PF17854 FtsK alpha domain BF33_5086 PF09397 Ftsk gamma domain BF33_5086 PF01580 FtsK/SpoIIIE family BF33_5088 PF02875 Mur ligase family, glutamate ligase domain BF33_5088 PF01225 Mur ligase family, catalytic domain BF33_5088 PF08245 Mur ligase middle domain BF33_5089 PF13302 Acetyltransferase (GNAT) domain BF33_509 PF00271 Helicase conserved C-terminal domain BF33_509 PF00270 DEAD/DEAH box helicase BF33_509 PF17191 RecG wedge domain BF33_5093 PF02073 Thermophilic metalloprotease (M29) BF33_5095 PF11009 Protein of unknown function (DUF2847) BF33_5096 PF07537 CamS sex pheromone cAM373 precursor BF33_5097 PF00356 Bacterial regulatory proteins, lacI family BF33_51 PF01807 CHC2 zinc finger BF33_51 PF08275 DNA primase catalytic core, N-terminal domain BF33_51 PF10410 DnaB-helicase binding domain of primase BF33_510 PF03061 Thioesterase superfamily BF33_5102 PF01741 Large-conductance mechanosensitive channel, MscL BF33_5103 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BF33_5104 PF12796 Ankyrin repeats (3 copies) BF33_5105 PF16736 Single Cache-like BF33_5105 PF00989 PAS fold BF33_5105 PF00512 His Kinase A (phospho-acceptor) domain BF33_5105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF33_5106 PF00072 Response regulator receiver domain BF33_5106 PF00486 Transcriptional regulatory protein, C terminal BF33_5108 PF00561 alpha/beta hydrolase fold BF33_5109 PF00850 Histone deacetylase domain BF33_511 PF02504 Fatty acid synthesis protein BF33_5110 PF00571 CBS domain BF33_5111 PF00583 Acetyltransferase (GNAT) family BF33_5112 PF00501 AMP-binding enzyme BF33_5112 PF13193 AMP-binding enzyme C-terminal domain BF33_5114 PF08281 Sigma-70, region 4 BF33_5114 PF04542 Sigma-70 region 2 BF33_5116 PF01479 S4 domain BF33_5116 PF00579 tRNA synthetases class I (W and Y) BF33_5119 PF00163 Ribosomal protein S4/S9 N-terminal domain BF33_5119 PF01479 S4 domain BF33_512 PF00698 Acyl transferase domain BF33_5120 PF01053 Cys/Met metabolism PLP-dependent enzyme BF33_5121 PF13185 GAF domain BF33_5122 PF00440 Bacterial regulatory proteins, tetR family BF33_5123 PF00892 EamA-like transporter family BF33_5124 PF03466 LysR substrate binding domain BF33_5124 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BF33_5125 PF06160 Septation ring formation regulator, EzrA BF33_5126 PF00266 Aminotransferase class-V BF33_5127 PF02568 Thiamine biosynthesis protein (ThiI) BF33_5127 PF02926 THUMP domain BF33_5128 PF00269 Small, acid-soluble spore proteins, alpha/beta type BF33_5129 PF13193 AMP-binding enzyme C-terminal domain BF33_5129 PF00501 AMP-binding enzyme BF33_5131 PF07969 Amidohydrolase family BF33_5132 PF01513 ATP-NAD kinase BF33_5134 PF09579 Sporulation protein YtfJ (Spore_YtfJ) BF33_5135 PF08534 Redoxin BF33_5136 PF02384 N-6 DNA Methylase BF33_5137 PF00871 Acetokinase family BF33_514 PF00550 Phosphopantetheine attachment site BF33_5140 PF12787 EcsC protein family BF33_5141 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BF33_5141 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BF33_5145 PF00764 Arginosuccinate synthase BF33_5146 PF14698 Argininosuccinate lyase C-terminal BF33_5146 PF00206 Lyase BF33_515 PF14622 Ribonuclease-III-like BF33_515 PF00035 Double-stranded RNA binding motif BF33_5150 PF00582 Universal stress protein family BF33_5152 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BF33_5152 PF05222 Alanine dehydrogenase/PNT, N-terminal domain BF33_5154 PF01381 Helix-turn-helix BF33_5156 PF07883 Cupin domain BF33_5159 PF08281 Sigma-70, region 4 BF33_5159 PF04542 Sigma-70 region 2 BF33_516 PF02463 RecF/RecN/SMC N terminal domain BF33_516 PF06470 SMC proteins Flexible Hinge Domain BF33_5164 PF11518 Protein of unknown function (DUF3221) BF33_5165 PF01321 Creatinase/Prolidase N-terminal domain BF33_5165 PF00557 Metallopeptidase family M24 BF33_5168 PF07085 DRTGG domain BF33_5168 PF00571 CBS domain BF33_5168 PF00392 Bacterial regulatory proteins, gntR family BF33_5168 PF03061 Thioesterase superfamily BF33_517 PF00448 SRP54-type protein, GTPase domain BF33_517 PF02881 SRP54-type protein, helical bundle domain BF33_5171 PF14007 YtpI-like protein BF33_5172 PF01368 DHH family BF33_5172 PF02272 DHHA1 domain BF33_5174 PF14034 Sporulation protein YtrH BF33_5175 PF02811 PHP domain BF33_5175 PF14579 Helix-hairpin-helix motif BF33_5175 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BF33_5175 PF07733 Bacterial DNA polymerase III alpha NTPase domain BF33_5175 PF01336 OB-fold nucleic acid binding domain BF33_5176 PF00390 Malic enzyme, N-terminal domain BF33_5176 PF03949 Malic enzyme, NAD binding domain BF33_5177 PF00392 Bacterial regulatory proteins, gntR family BF33_5178 PF17848 Acetyl-coA carboxylase zinc finger domain BF33_5178 PF01039 Carboxyl transferase domain BF33_5179 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit BF33_518 PF04297 Putative helix-turn-helix protein, YlxM / p13 like BF33_5180 PF00365 Phosphofructokinase BF33_5181 PF02887 Pyruvate kinase, alpha/beta domain BF33_5181 PF00224 Pyruvate kinase, barrel domain BF33_5181 PF00391 PEP-utilising enzyme, mobile domain BF33_5182 PF04186 FxsA cytoplasmic membrane protein BF33_5183 PF01594 AI-2E family transporter BF33_5184 PF04284 Protein of unknown function (DUF441) BF33_5185 PF00285 Citrate synthase, C-terminal domain BF33_5186 PF00180 Isocitrate/isopropylmalate dehydrogenase BF33_5187 PF00056 lactate/malate dehydrogenase, NAD binding domain BF33_5187 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BF33_519 PF02978 Signal peptide binding domain BF33_519 PF00448 SRP54-type protein, GTPase domain BF33_519 PF02881 SRP54-type protein, helical bundle domain BF33_5191 PF00072 Response regulator receiver domain BF33_5191 PF00486 Transcriptional regulatory protein, C terminal BF33_5192 PF16736 Single Cache-like BF33_5192 PF00989 PAS fold BF33_5192 PF00512 His Kinase A (phospho-acceptor) domain BF33_5192 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF33_5193 PF00476 DNA polymerase family A BF33_5193 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BF33_5193 PF01367 5'-3' exonuclease, C-terminal SAM fold BF33_5194 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain BF33_5194 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain BF33_5194 PF06827 Zinc finger found in FPG and IleRS BF33_5195 PF02659 Putative manganese efflux pump BF33_5196 PF01121 Dephospho-CoA kinase BF33_5197 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BF33_5197 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BF33_5198 PF02675 S-adenosylmethionine decarboxylase BF33_5199 PF03477 ATP cone domain BF33_52 PF03979 Sigma-70 factor, region 1.1 BF33_52 PF00140 Sigma-70 factor, region 1.2 BF33_52 PF04542 Sigma-70 region 2 BF33_52 PF04539 Sigma-70 region 3 BF33_52 PF04545 Sigma-70, region 4 BF33_520 PF00886 Ribosomal protein S16 BF33_5200 PF07261 Replication initiation and membrane attachment BF33_5201 PF07319 Primosomal protein DnaI N-terminus BF33_5201 PF01695 IstB-like ATP binding protein BF33_5202 PF08812 YtxC-like family BF33_5203 PF03129 Anticodon binding domain BF33_5203 PF02824 TGS domain BF33_5203 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BF33_5203 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BF33_5204 PF00707 Translation initiation factor IF-3, C-terminal domain BF33_5204 PF05198 Translation initiation factor IF-3, N-terminal domain BF33_5205 PF01632 Ribosomal protein L35 BF33_5206 PF00453 Ribosomal protein L20 BF33_5208 PF05343 M42 glutamyl aminopeptidase BF33_5209 PF00440 Bacterial regulatory proteins, tetR family BF33_5209 PF16859 Tetracyclin repressor-like, C-terminal domain BF33_5211 PF07690 Major Facilitator Superfamily BF33_5216 PF01966 HD domain BF33_5217 PF14098 Small, acid-soluble spore protein I BF33_5218 PF00588 SpoU rRNA Methylase family BF33_5218 PF08032 RNA 2'-O ribose methyltransferase substrate binding BF33_5219 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain BF33_5219 PF01409 tRNA synthetases class II core domain (F) BF33_522 PF05239 PRC-barrel domain BF33_522 PF01782 RimM N-terminal domain BF33_5220 PF03484 tRNA synthetase B5 domain BF33_5220 PF03483 B3/4 domain BF33_5220 PF03147 Ferredoxin-fold anticodon binding domain BF33_5220 PF01588 Putative tRNA binding domain BF33_5220 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain BF33_5221 PF00152 tRNA synthetases class II (D, K and N) BF33_5221 PF01336 OB-fold nucleic acid binding domain BF33_5225 PF11858 Domain of unknown function (DUF3378) BF33_5225 PF01351 Ribonuclease HII BF33_5226 PF05164 Cell division protein ZapA BF33_5227 PF02674 Colicin V production protein BF33_5228 PF14791 DNA polymerase beta thumb BF33_5228 PF14716 Helix-hairpin-helix domain BF33_5228 PF02811 PHP domain BF33_5229 PF00488 MutS domain V BF33_5229 PF01713 Smr domain BF33_523 PF01746 tRNA (Guanine-1)-methyltransferase BF33_5231 PF00849 RNA pseudouridylate synthase BF33_5231 PF01479 S4 domain BF33_5232 PF05525 Branched-chain amino acid transport protein BF33_5233 PF05031 Iron Transport-associated domain BF33_5235 PF05031 Iron Transport-associated domain BF33_5236 PF01497 Periplasmic binding protein BF33_5237 PF01032 FecCD transport family BF33_5238 PF00005 ABC transporter BF33_5239 PF04203 Sortase domain BF33_524 PF01245 Ribosomal protein L19 BF33_5240 PF03992 Antibiotic biosynthesis monooxygenase BF33_5242 PF10672 S-adenosylmethionine-dependent methyltransferase BF33_5242 PF17785 PUA-like domain BF33_5243 PF09962 Uncharacterized conserved protein (DUF2196) BF33_5245 PF00072 Response regulator receiver domain BF33_5245 PF00486 Transcriptional regulatory protein, C terminal BF33_5246 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF33_5246 PF00512 His Kinase A (phospho-acceptor) domain BF33_5247 PF00005 ABC transporter BF33_525 PF10502 Signal peptidase, peptidase S26 BF33_5252 PF05163 DinB family BF33_5253 PF01032 FecCD transport family BF33_5254 PF01497 Periplasmic binding protein BF33_5256 PF00501 AMP-binding enzyme BF33_5256 PF13193 AMP-binding enzyme C-terminal domain BF33_5257 PF00440 Bacterial regulatory proteins, tetR family BF33_5257 PF08359 YsiA-like protein, C-terminal region BF33_5258 PF00378 Enoyl-CoA hydratase/isomerase BF33_5259 PF01012 Electron transfer flavoprotein domain BF33_526 PF01926 50S ribosome-binding GTPase BF33_5260 PF01012 Electron transfer flavoprotein domain BF33_5260 PF00766 Electron transfer flavoprotein FAD-binding domain BF33_5261 PF00085 Thioredoxin BF33_5262 PF01541 GIY-YIG catalytic domain BF33_5262 PF02151 UvrB/uvrC motif BF33_5262 PF08459 UvrC Helix-hairpin-helix N-terminal BF33_5263 PF10702 Protein of unknown function (DUF2507) BF33_5264 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit BF33_5265 PF00890 FAD binding domain BF33_5265 PF02910 Fumarate reductase flavoprotein C-term BF33_5266 PF13085 2Fe-2S iron-sulfur cluster binding domain BF33_5266 PF13183 4Fe-4S dicluster domain BF33_5267 PF03061 Thioesterase superfamily BF33_5268 PF02557 D-alanyl-D-alanine carboxypeptidase BF33_5269 PF01618 MotA/TolQ/ExbB proton channel family BF33_527 PF01351 Ribonuclease HII BF33_5270 PF00691 OmpA family BF33_5270 PF13677 Membrane MotB of proton-channel complex MotA/MotB BF33_5271 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) BF33_5272 PF13732 Domain of unknown function (DUF4162) BF33_5272 PF00005 ABC transporter BF33_5274 PF02082 Transcriptional regulator BF33_5275 PF00230 Major intrinsic protein BF33_5276 PF13536 Putative multidrug resistance efflux transporter BF33_5277 PF01381 Helix-turn-helix BF33_5277 PF07883 Cupin domain BF33_5278 PF04024 PspC domain BF33_528 PF08442 ATP-grasp domain BF33_528 PF00549 CoA-ligase BF33_5280 PF04397 LytTr DNA-binding domain BF33_5280 PF00072 Response regulator receiver domain BF33_5281 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF33_5281 PF07694 5TMR of 5TMR-LYT BF33_5281 PF06580 Histidine kinase BF33_5282 PF00005 ABC transporter BF33_5282 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BF33_5283 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BF33_5283 PF00005 ABC transporter BF33_5284 PF00528 Binding-protein-dependent transport system inner membrane component BF33_5286 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BF33_5287 PF07969 Amidohydrolase family BF33_5288 PF07969 Amidohydrolase family BF33_529 PF02629 CoA binding domain BF33_529 PF00549 CoA-ligase BF33_5290 PF00860 Permease family BF33_5291 PF00196 Bacterial regulatory proteins, luxR family BF33_5296 PF17768 RecJ OB domain BF33_5296 PF01368 DHH family BF33_5296 PF10141 Single-strand DNA-specific exonuclease, C terminal domain BF33_5296 PF02272 DHHA1 domain BF33_53 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BF33_530 PF02481 DNA recombination-mediator protein A BF33_5301 PF01758 Sodium Bile acid symporter family BF33_5304 PF01022 Bacterial regulatory protein, arsR family BF33_5305 PF01451 Low molecular weight phosphotyrosine protein phosphatase BF33_5306 PF06953 Arsenical resistance operon trans-acting repressor ArsD BF33_5307 PF02374 Anion-transporting ATPase BF33_5309 PF08281 Sigma-70, region 4 BF33_5309 PF04542 Sigma-70 region 2 BF33_531 PF01396 Topoisomerase DNA binding C4 zinc finger BF33_531 PF01751 Toprim domain BF33_531 PF01131 DNA topoisomerase BF33_5310 PF13847 Methyltransferase domain BF33_5318 PF01965 DJ-1/PfpI family BF33_5319 PF00440 Bacterial regulatory proteins, tetR family BF33_532 PF01134 Glucose inhibited division protein A BF33_5321 PF07690 Major Facilitator Superfamily BF33_5322 PF01177 Asp/Glu/Hydantoin racemase BF33_5323 PF10646 Sporulation and spore germination BF33_5324 PF01138 3' exoribonuclease family, domain 1 BF33_5324 PF03725 3' exoribonuclease family, domain 2 BF33_5325 PF01725 Ham1 family BF33_5326 PF12850 Calcineurin-like phosphoesterase superfamily domain BF33_533 PF02899 Phage integrase, N-terminal SAM-like domain BF33_533 PF00589 Phage integrase family BF33_5330 PF11724 YvbH-like oligomerisation region BF33_5330 PF08000 Bacterial PH domain BF33_5335 PF05698 Bacterial trigger factor protein (TF) C-terminus BF33_5335 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BF33_5335 PF05697 Bacterial trigger factor protein (TF) BF33_5336 PF06689 ClpX C4-type zinc finger BF33_5336 PF07724 AAA domain (Cdc48 subfamily) BF33_5336 PF10431 C-terminal, D2-small domain, of ClpB protein BF33_5337 PF00004 ATPase family associated with various cellular activities (AAA) BF33_5337 PF05362 Lon protease (S16) C-terminal proteolytic domain BF33_5338 PF00004 ATPase family associated with various cellular activities (AAA) BF33_5338 PF05362 Lon protease (S16) C-terminal proteolytic domain BF33_5338 PF02190 ATP-dependent protease La (LON) substrate-binding domain BF33_5339 PF01926 50S ribosome-binding GTPase BF33_534 PF00227 Proteasome subunit BF33_5340 PF02566 OsmC-like protein BF33_5341 PF01047 MarR family BF33_5342 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain BF33_5342 PF01488 Shikimate / quinate 5-dehydrogenase BF33_5342 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain BF33_5343 PF01578 Cytochrome C assembly protein BF33_5344 PF03900 Porphobilinogen deaminase, C-terminal domain BF33_5344 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain BF33_5345 PF02602 Uroporphyrinogen-III synthase HemD BF33_5346 PF00490 Delta-aminolevulinic acid dehydratase BF33_5347 PF00202 Aminotransferase class-III BF33_5348 PF01476 LysM domain BF33_535 PF00004 ATPase family associated with various cellular activities (AAA) BF33_535 PF07724 AAA domain (Cdc48 subfamily) BF33_535 PF10431 C-terminal, D2-small domain, of ClpB protein BF33_5350 PF08264 Anticodon-binding domain of tRNA BF33_5350 PF00133 tRNA synthetases class I (I, L, M and V) BF33_5350 PF10458 Valyl tRNA synthetase tRNA binding arm BF33_5351 PF08245 Mur ligase middle domain BF33_5351 PF02875 Mur ligase family, glutamate ligase domain BF33_5353 PF02545 Maf-like protein BF33_5354 PF04002 RadC-like JAB domain BF33_5356 PF04085 rod shape-determining protein MreC BF33_5358 PF03775 Septum formation inhibitor MinC, C-terminal domain BF33_5359 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BF33_536 PF06018 CodY GAF-like domain BF33_536 PF08222 CodY helix-turn-helix domain BF33_5360 PF01551 Peptidase family M23 BF33_5361 PF02163 Peptidase family M50 BF33_5362 PF10150 Ribonuclease E/G family BF33_5362 PF00575 S1 RNA binding domain BF33_5363 PF00829 Ribosomal prokaryotic L21 protein BF33_5364 PF04327 Cysteine protease Prp BF33_5365 PF01016 Ribosomal L27 protein BF33_5366 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain BF33_5366 PF14682 Sporulation initiation phospho-transferase B, C-terminal BF33_5367 PF01926 50S ribosome-binding GTPase BF33_5367 PF01018 GTP1/OBG BF33_5367 PF09269 Domain of unknown function (DUF1967) BF33_5368 PF00486 Transcriptional regulatory protein, C terminal BF33_5368 PF00072 Response regulator receiver domain BF33_5369 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF33_537 PF00318 Ribosomal protein S2 BF33_5370 PF00005 ABC transporter BF33_5371 PF02687 FtsX-like permease family BF33_5372 PF02687 FtsX-like permease family BF33_5373 PF01842 ACT domain BF33_5373 PF00800 Prephenate dehydratase BF33_5374 PF03475 3-alpha domain BF33_5374 PF03473 MOSC domain BF33_5375 PF02829 3H domain BF33_5375 PF08279 HTH domain BF33_5376 PF00266 Aminotransferase class-V BF33_5377 PF02910 Fumarate reductase flavoprotein C-term BF33_5377 PF00890 FAD binding domain BF33_5378 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain BF33_5378 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain BF33_5379 PF02445 Quinolinate synthetase A protein BF33_538 PF00889 Elongation factor TS BF33_5380 PF01476 LysM domain BF33_5384 PF01497 Periplasmic binding protein BF33_5385 PF07499 RuvA, C-terminal domain BF33_5385 PF01330 RuvA N terminal domain BF33_5386 PF17864 RuvB AAA lid domain BF33_5386 PF05496 Holliday junction DNA helicase RuvB P-loop domain BF33_5386 PF05491 RuvB C-terminal winged helix domain BF33_5387 PF11146 Protein of unknown function (DUF2905) BF33_5388 PF02547 Queuosine biosynthesis protein BF33_5389 PF01702 Queuine tRNA-ribosyltransferase BF33_539 PF00696 Amino acid kinase family BF33_5390 PF02699 Preprotein translocase subunit BF33_5392 PF04239 Protein of unknown function (DUF421) BF33_5393 PF01943 Polysaccharide biosynthesis protein BF33_5393 PF14667 Polysaccharide biosynthesis C-terminal domain BF33_5394 PF13797 Post-transcriptional regulator BF33_5395 PF02355 Protein export membrane protein BF33_5395 PF07549 SecD/SecF GG Motif BF33_5396 PF16916 Dimerisation domain of Zinc Transporter BF33_5396 PF01545 Cation efflux family BF33_5397 PF10141 Single-strand DNA-specific exonuclease, C terminal domain BF33_5397 PF17768 RecJ OB domain BF33_5397 PF02272 DHHA1 domain BF33_5397 PF01368 DHH family BF33_5398 PF00156 Phosphoribosyl transferase domain BF33_5399 PF13291 ACT domain BF33_5399 PF02824 TGS domain BF33_5399 PF04607 Region found in RelA / SpoT proteins BF33_54 PF04816 tRNA (adenine(22)-N(1))-methyltransferase BF33_540 PF01765 Ribosome recycling factor BF33_5400 PF02580 D-Tyr-tRNA(Tyr) deacylase BF33_5403 PF13393 Histidyl-tRNA synthetase BF33_5403 PF03129 Anticodon binding domain BF33_5404 PF01336 OB-fold nucleic acid binding domain BF33_5404 PF02938 GAD domain BF33_5404 PF00152 tRNA synthetases class II (D, K and N) BF33_5405 PF00899 ThiF family BF33_5407 PF16193 AAA C-terminal domain BF33_5407 PF12002 MgsA AAA+ ATPase C terminal BF33_5407 PF05496 Holliday junction DNA helicase RuvB P-loop domain BF33_5408 PF02082 Transcriptional regulator BF33_5409 PF00266 Aminotransferase class-V BF33_541 PF01255 Putative undecaprenyl diphosphate synthase BF33_5412 PF14490 Helix-hairpin-helix containing domain BF33_5412 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain BF33_5412 PF13538 UvrD-like helicase C-terminal domain BF33_5416 PF01594 AI-2E family transporter BF33_5418 PF02272 DHHA1 domain BF33_5418 PF01411 tRNA synthetases class II (A) BF33_5418 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BF33_5419 PF06135 IreB regulatory phosphoprotein BF33_5420 PF03652 Holliday junction resolvase BF33_5421 PF06949 Protein of unknown function (DUF1292) BF33_5422 PF02618 YceG-like family BF33_5426 PF00485 Phosphoribulokinase / Uridine kinase family BF33_5427 PF01272 Transcription elongation factor, GreA/GreB, C-term BF33_5427 PF03449 Transcription elongation factor, N-terminal BF33_5428 PF03717 Penicillin-binding Protein dimerisation domain BF33_5428 PF00905 Penicillin binding protein transpeptidase domain BF33_543 PF13288 DXP reductoisomerase C-terminal domain BF33_543 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase BF33_543 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain BF33_5431 PF08241 Methyltransferase domain BF33_5432 PF01048 Phosphorylase superfamily BF33_5433 PF00291 Pyridoxal-phosphate dependent enzyme BF33_5434 PF01053 Cys/Met metabolism PLP-dependent enzyme BF33_5435 PF00465 Iron-containing alcohol dehydrogenase BF33_5435 PF00171 Aldehyde dehydrogenase family BF33_5436 PF14143 YrhC-like protein BF33_5437 PF01497 Periplasmic binding protein BF33_5438 PF01032 FecCD transport family BF33_5439 PF00005 ABC transporter BF33_544 PF17820 PDZ domain BF33_544 PF02163 Peptidase family M50 BF33_5445 PF07681 DoxX BF33_5446 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BF33_5448 PF00351 Biopterin-dependent aromatic amino acid hydroxylase BF33_5449 PF02225 PA domain BF33_5449 PF05922 Peptidase inhibitor I9 BF33_5449 PF13860 FlgD Ig-like domain BF33_5449 PF00082 Subtilase family BF33_545 PF03129 Anticodon binding domain BF33_545 PF04073 Aminoacyl-tRNA editing domain BF33_545 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BF33_5456 PF00561 alpha/beta hydrolase fold BF33_5456 PF08386 TAP-like protein BF33_5458 PF00245 Alkaline phosphatase BF33_5459 PF03845 Spore germination protein BF33_546 PF14579 Helix-hairpin-helix motif BF33_546 PF07733 Bacterial DNA polymerase III alpha NTPase domain BF33_546 PF00929 Exonuclease BF33_546 PF02811 PHP domain BF33_546 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BF33_546 PF11490 DNA polymerase III polC-type N-terminus II BF33_546 PF14480 DNA polymerase III polC-type N-terminus I BF33_5461 PF02796 Helix-turn-helix domain of resolvase BF33_5461 PF00239 Resolvase, N terminal domain BF33_5462 PF00574 Clp protease BF33_5463 PF04239 Protein of unknown function (DUF421) BF33_5465 PF03862 SpoVAC/SpoVAEB sporulation membrane protein BF33_5466 PF07451 Stage V sporulation protein AD (SpoVAD) BF33_5467 PF03862 SpoVAC/SpoVAEB sporulation membrane protein BF33_547 PF02576 RimP N-terminal domain BF33_547 PF17384 RimP C-terminal SH3 domain BF33_5470 PF02899 Phage integrase, N-terminal SAM-like domain BF33_5470 PF00589 Phage integrase family BF33_5472 PF03323 Bacillus/Clostridium GerA spore germination protein BF33_5473 PF01520 N-acetylmuramoyl-L-alanine amidase BF33_5473 PF05036 Sporulation related domain BF33_5475 PF02796 Helix-turn-helix domain of resolvase BF33_5475 PF00239 Resolvase, N terminal domain BF33_5477 PF00239 Resolvase, N terminal domain BF33_5477 PF02796 Helix-turn-helix domain of resolvase BF33_5478 PF00665 Integrase core domain BF33_5478 PF09299 Mu transposase, C-terminal BF33_5479 PF13401 AAA domain BF33_548 PF13184 NusA-like KH domain BF33_548 PF08529 NusA N-terminal domain BF33_548 PF00575 S1 RNA binding domain BF33_5480 PF00239 Resolvase, N terminal domain BF33_5480 PF02796 Helix-turn-helix domain of resolvase BF33_5481 PF12833 Helix-turn-helix domain BF33_5481 PF06445 GyrI-like small molecule binding domain BF33_5482 PF03845 Spore germination protein BF33_5483 PF03323 Bacillus/Clostridium GerA spore germination protein BF33_5486 PF00857 Isochorismatase family BF33_5489 PF05504 Spore germination B3/ GerAC like, C-terminal BF33_549 PF04296 Protein of unknown function (DUF448) BF33_5491 PF01609 Transposase DDE domain BF33_5493 PF13700 Domain of unknown function (DUF4158) BF33_5493 PF01526 Tn3 transposase DDE domain BF33_5494 PF13419 Haloacid dehalogenase-like hydrolase BF33_5496 PF00269 Small, acid-soluble spore proteins, alpha/beta type BF33_55 PF01784 NIF3 (NGG1p interacting factor 3) BF33_550 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family BF33_5503 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) BF33_5507 PF00392 Bacterial regulatory proteins, gntR family BF33_5507 PF00155 Aminotransferase class I and II BF33_5508 PF00117 Glutamine amidotransferase class-I BF33_551 PF00009 Elongation factor Tu GTP binding domain BF33_551 PF11987 Translation-initiation factor 2 BF33_551 PF04760 Translation initiation factor IF-2, N-terminal region BF33_5510 PF08808 RES domain BF33_5517 PF07972 NrdI Flavodoxin like BF33_552 PF04456 Protein of unknown function (DUF503) BF33_553 PF02033 Ribosome-binding factor A BF33_5536 PF01348 Type II intron maturase BF33_5536 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) BF33_554 PF01509 TruB family pseudouridylate synthase (N terminal domain) BF33_554 PF16198 tRNA pseudouridylate synthase B C-terminal domain BF33_5545 PF10502 Signal peptidase, peptidase S26 BF33_555 PF06574 FAD synthetase BF33_555 PF01687 Riboflavin kinase BF33_5550 PF06144 DNA polymerase III, delta subunit BF33_5552 PF04545 Sigma-70, region 4 BF33_5552 PF04539 Sigma-70 region 3 BF33_5552 PF04542 Sigma-70 region 2 BF33_5552 PF00140 Sigma-70 factor, region 1.2 BF33_5552 PF03979 Sigma-70 factor, region 1.1 BF33_5555 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) BF33_556 PF00312 Ribosomal protein S15 BF33_5567 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) BF33_5567 PF01348 Type II intron maturase BF33_557 PF00575 S1 RNA binding domain BF33_557 PF03725 3' exoribonuclease family, domain 2 BF33_557 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain BF33_557 PF00013 KH domain BF33_557 PF01138 3' exoribonuclease family, domain 1 BF33_558 PF01522 Polysaccharide deacetylase BF33_5582 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) BF33_5586 PF00877 NlpC/P60 family BF33_5589 PF00005 ABC transporter BF33_559 PF05193 Peptidase M16 inactive domain BF33_559 PF00675 Insulinase (Peptidase family M16) BF33_5593 PF06463 Molybdenum Cofactor Synthesis C BF33_5593 PF04055 Radical SAM superfamily BF33_5598 PF13333 Integrase core domain BF33_5598 PF13276 HTH-like domain BF33_5598 PF00665 Integrase core domain BF33_56 PF02401 LytB protein BF33_560 PF05239 PRC-barrel domain BF33_5609 PF05163 DinB family BF33_561 PF16924 Dipicolinate synthase subunit A N-terminal domain BF33_561 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BF33_5616 PF12323 Helix-turn-helix domain BF33_5616 PF01385 Probable transposase BF33_5616 PF07282 Putative transposase DNA-binding domain BF33_562 PF02441 Flavoprotein BF33_5623 PF01494 FAD binding domain BF33_563 PF02774 Semialdehyde dehydrogenase, dimerisation domain BF33_563 PF01118 Semialdehyde dehydrogenase, NAD binding domain BF33_564 PF00696 Amino acid kinase family BF33_564 PF13840 ACT domain BF33_5644 PF17854 FtsK alpha domain BF33_5644 PF09397 Ftsk gamma domain BF33_5644 PF01580 FtsK/SpoIIIE family BF33_5647 PF01381 Helix-turn-helix BF33_565 PF00701 Dihydrodipicolinate synthetase family BF33_5653 PF12169 DNA polymerase III subunits gamma and tau domain III BF33_5655 PF00580 UvrD/REP helicase N-terminal domain BF33_5655 PF13361 UvrD-like helicase C-terminal domain BF33_5656 PF09115 DNA polymerase III, delta subunit, C terminal BF33_566 PF17770 Ribonuclease J C-terminal domain BF33_566 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain BF33_566 PF00753 Metallo-beta-lactamase superfamily BF33_5660 PF00092 von Willebrand factor type A domain BF33_5661 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin BF33_5661 PF18277 AbrB C-terminal domain BF33_5667 PF00665 Integrase core domain BF33_5667 PF13333 Integrase core domain BF33_5667 PF13276 HTH-like domain BF33_5668 PF02557 D-alanyl-D-alanine carboxypeptidase BF33_567 PF00574 Clp protease BF33_5672 PF02374 Anion-transporting ATPase BF33_5673 PF06953 Arsenical resistance operon trans-acting repressor ArsD BF33_5674 PF01451 Low molecular weight phosphotyrosine protein phosphatase BF33_5675 PF01758 Sodium Bile acid symporter family BF33_5676 PF01022 Bacterial regulatory protein, arsR family BF33_568 PF14035 YlzJ-like protein BF33_5680 PF02492 CobW/HypB/UreG, nucleotide-binding domain BF33_5680 PF07683 Cobalamin synthesis protein cobW C-terminal domain BF33_5681 PF00230 Major intrinsic protein BF33_5683 PF01381 Helix-turn-helix BF33_5684 PF01384 Phosphate transporter family BF33_5685 PF01022 Bacterial regulatory protein, arsR family BF33_5686 PF02655 ATP-grasp domain BF33_5686 PF00206 Lyase BF33_5688 PF01047 MarR family BF33_569 PF09397 Ftsk gamma domain BF33_569 PF01580 FtsK/SpoIIIE family BF33_569 PF17854 FtsK alpha domain BF33_5697 PF00403 Heavy-metal-associated domain BF33_5698 PF00403 Heavy-metal-associated domain BF33_5699 PF02583 Metal-sensitive transcriptional repressor BF33_570 PF07702 UTRA domain BF33_570 PF00392 Bacterial regulatory proteins, gntR family BF33_5700 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment BF33_5700 PF01297 Zinc-uptake complex component A periplasmic BF33_5704 PF00578 AhpC/TSA family BF33_5705 PF01790 Prolipoprotein diacylglyceryl transferase BF33_5706 PF03860 Domain of Unknown Function (DUF326) BF33_5707 PF01522 Polysaccharide deacetylase BF33_5717 PF00291 Pyridoxal-phosphate dependent enzyme BF33_5724 PF00085 Thioredoxin BF33_5728 PF00005 ABC transporter BF33_5729 PF00264 Common central domain of tyrosinase BF33_5730 PF00394 Multicopper oxidase BF33_5730 PF07731 Multicopper oxidase BF33_5730 PF07732 Multicopper oxidase BF33_5731 PF00072 Response regulator receiver domain BF33_5731 PF00486 Transcriptional regulatory protein, C terminal BF33_5732 PF00512 His Kinase A (phospho-acceptor) domain BF33_5732 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF33_5732 PF16736 Single Cache-like BF33_5732 PF00989 PAS fold BF33_5734 PF07454 Stage II sporulation protein P (SpoIIP) BF33_5744 PF04262 Glutamate-cysteine ligase BF33_5744 PF18419 ATP-grasp-like domain BF33_5744 PF02655 ATP-grasp domain BF33_5746 PF00756 Putative esterase BF33_5747 PF08240 Alcohol dehydrogenase GroES-like domain BF33_5747 PF00107 Zinc-binding dehydrogenase BF33_5748 PF01638 HxlR-like helix-turn-helix BF33_5749 PF01526 Tn3 transposase DDE domain BF33_5749 PF13700 Domain of unknown function (DUF4158) BF33_575 PF05193 Peptidase M16 inactive domain BF33_5752 PF03323 Bacillus/Clostridium GerA spore germination protein BF33_5756 PF03796 DnaB-like helicase C terminal domain BF33_5756 PF00772 DnaB-like helicase N terminal domain BF33_576 PF05193 Peptidase M16 inactive domain BF33_576 PF00675 Insulinase (Peptidase family M16) BF33_5776 PF05866 Endodeoxyribonuclease RusA BF33_578 PF11588 Protein of unknown function (DUF3243) BF33_5783 PF10668 Phage terminase small subunit BF33_5785 PF04860 Phage portal protein BF33_5786 PF04233 Phage Mu protein F like protein BF33_5787 PF14550 Putative phage serine protease XkdF BF33_5788 PF05065 Phage capsid family BF33_579 PF11868 Protein of unknown function (DUF3388) BF33_5792 PF04883 Bacteriophage HK97-gp10, putative tail-component BF33_58 PF00271 Helicase conserved C-terminal domain BF33_58 PF00270 DEAD/DEAH box helicase BF33_580 PF13464 Domain of unknown function (DUF4115) BF33_5806 PF01510 N-acetylmuramoyl-L-alanine amidase BF33_5809 PF01541 GIY-YIG catalytic domain BF33_581 PF01066 CDP-alcohol phosphatidyltransferase BF33_5815 PF13152 Protein of unknown function (DUF3967) BF33_5815 PF13411 MerR HTH family regulatory protein BF33_5818 PF13614 AAA domain BF33_582 PF00994 Probable molybdopterin binding domain BF33_582 PF18146 Damage-inducible protein CinA KH domain BF33_582 PF02464 Competence-damaged protein BF33_5826 PF01381 Helix-turn-helix BF33_583 PF00154 recA bacterial DNA recombination protein BF33_5832 PF09588 YqaJ-like viral recombinase domain BF33_5833 PF03837 RecT family BF33_5836 PF00239 Resolvase, N terminal domain BF33_5836 PF02796 Helix-turn-helix domain of resolvase BF33_584 PF00154 recA bacterial DNA recombination protein BF33_585 PF01966 HD domain BF33_585 PF00013 KH domain BF33_585 PF12072 Domain of unknown function (DUF3552) BF33_586 PF13277 YmdB-like protein BF33_587 PF04232 Stage V sporulation protein S (SpoVS) BF33_588 PF01244 Membrane dipeptidase (Peptidase family M19) BF33_589 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II BF33_589 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase BF33_589 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg BF33_59 PF01261 Xylose isomerase-like TIM barrel BF33_590 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BF33_591 PF01938 TRAM domain BF33_591 PF04055 Radical SAM superfamily BF33_591 PF00919 Uncharacterized protein family UPF0004 BF33_592 PF06133 Control of competence regulator ComK, YlbF/YmcA BF33_593 PF10628 Outer spore coat protein E (CotE) BF33_594 PF00488 MutS domain V BF33_594 PF01624 MutS domain I BF33_594 PF05188 MutS domain II BF33_594 PF05192 MutS domain III BF33_594 PF05190 MutS family domain IV BF33_595 PF01119 DNA mismatch repair protein, C-terminal domain BF33_595 PF08676 MutL C terminal dimerisation domain BF33_596 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family BF33_598 PF00350 Dynamin family BF33_599 PF00884 Sulfatase BF33_60 PF11116 Protein of unknown function (DUF2624) BF33_600 PF03275 UDP-galactopyranose mutase BF33_601 PF07486 Cell Wall Hydrolase BF33_602 PF00082 Subtilase family BF33_603 PF00388 Phosphatidylinositol-specific phospholipase C, X domain BF33_605 PF02585 GlcNAc-PI de-N-acetylase BF33_606 PF00364 Biotin-requiring enzyme BF33_606 PF00561 alpha/beta hydrolase fold BF33_607 PF00392 Bacterial regulatory proteins, gntR family BF33_607 PF00155 Aminotransferase class I and II BF33_608 PF03788 LrgA family BF33_609 PF04172 LrgB-like family BF33_61 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BF33_61 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BF33_610 PF10787 Uncharacterised protein from bacillus cereus group BF33_612 PF03707 Bacterial signalling protein N terminal repeat BF33_612 PF00990 Diguanylate cyclase, GGDEF domain BF33_612 PF00563 EAL domain BF33_613 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BF33_614 PF00561 alpha/beta hydrolase fold BF33_618 PF01546 Peptidase family M20/M25/M40 BF33_618 PF07687 Peptidase dimerisation domain BF33_619 PF00730 HhH-GPD superfamily base excision DNA repair protein BF33_619 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain BF33_62 PF00005 ABC transporter BF33_620 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain BF33_620 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BF33_621 PF12833 Helix-turn-helix domain BF33_621 PF02805 Metal binding domain of Ada BF33_622 PF03372 Endonuclease/Exonuclease/phosphatase family BF33_623 PF01497 Periplasmic binding protein BF33_624 PF01032 FecCD transport family BF33_625 PF01032 FecCD transport family BF33_626 PF00005 ABC transporter BF33_627 PF00756 Putative esterase BF33_629 PF02583 Metal-sensitive transcriptional repressor BF33_63 PF00950 ABC 3 transport family BF33_630 PF00403 Heavy-metal-associated domain BF33_631 PF00403 Heavy-metal-associated domain BF33_632 PF00216 Bacterial DNA-binding protein BF33_633 PF01226 Formate/nitrite transporter BF33_634 PF10518 TAT (twin-arginine translocation) pathway signal sequence BF33_634 PF00149 Calcineurin-like phosphoesterase BF33_636 PF00041 Fibronectin type III domain BF33_636 PF00704 Glycosyl hydrolases family 18 BF33_637 PF00324 Amino acid permease BF33_64 PF01475 Ferric uptake regulator family BF33_640 PF04238 Protein of unknown function (DUF420) BF33_641 PF00465 Iron-containing alcohol dehydrogenase BF33_642 PF08220 DeoR-like helix-turn-helix domain BF33_642 PF00455 DeoR C terminal sensor domain BF33_643 PF00294 pfkB family carbohydrate kinase BF33_644 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BF33_644 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BF33_645 PF01476 LysM domain BF33_645 PF06725 3D domain BF33_648 PF17209 Hfq protein BF33_65 PF04551 GcpE protein BF33_651 PF17866 AAA lid domain BF33_651 PF00004 ATPase family associated with various cellular activities (AAA) BF33_653 PF03458 UPF0126 domain BF33_654 PF01926 50S ribosome-binding GTPase BF33_654 PF13167 GTP-binding GTPase N-terminal BF33_654 PF16360 GTP-binding GTPase Middle Region BF33_655 PF06838 Methionine gamma-lyase BF33_656 PF13411 MerR HTH family regulatory protein BF33_657 PF03951 Glutamine synthetase, beta-Grasp domain BF33_657 PF00120 Glutamine synthetase, catalytic domain BF33_660 PF14449 Pre-toxin TG BF33_660 PF14431 YwqJ-like deaminase BF33_660 PF04740 LXG domain of WXG superfamily BF33_663 PF03551 Transcriptional regulator PadR-like family BF33_666 PF01726 LexA DNA binding domain BF33_666 PF00717 Peptidase S24-like BF33_667 PF00239 Resolvase, N terminal domain BF33_668 PF05979 Bacterial protein of unknown function (DUF896) BF33_669 PF02872 5'-nucleotidase, C-terminal domain BF33_669 PF00149 Calcineurin-like phosphoesterase BF33_671 PF00005 ABC transporter BF33_672 PF00528 Binding-protein-dependent transport system inner membrane component BF33_673 PF00528 Binding-protein-dependent transport system inner membrane component BF33_674 PF07282 Putative transposase DNA-binding domain BF33_674 PF01385 Probable transposase BF33_674 PF12323 Helix-turn-helix domain BF33_675 PF02780 Transketolase, C-terminal domain BF33_675 PF00456 Transketolase, thiamine diphosphate binding domain BF33_675 PF02779 Transketolase, pyrimidine binding domain BF33_676 PF10747 Sporulation inhibitor of replication protein SirA BF33_677 PF03672 Uncharacterised protein family (UPF0154) BF33_678 PF00005 ABC transporter BF33_678 PF00664 ABC transporter transmembrane region BF33_679 PF00005 ABC transporter BF33_679 PF00664 ABC transporter transmembrane region BF33_682 PF01510 N-acetylmuramoyl-L-alanine amidase BF33_682 PF01471 Putative peptidoglycan binding domain BF33_684 PF01925 Sulfite exporter TauE/SafE BF33_686 PF13344 Haloacid dehalogenase-like hydrolase BF33_686 PF00293 NUDIX domain BF33_687 PF04172 LrgB-like family BF33_688 PF03788 LrgA family BF33_689 PF03466 LysR substrate binding domain BF33_689 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BF33_69 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BF33_69 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BF33_691 PF00005 ABC transporter BF33_695 PF02683 Cytochrome C biogenesis protein transmembrane region BF33_696 PF07301 Protein of unknown function (DUF1453) BF33_699 PF11084 Protein of unknown function (DUF2621) BF33_7 PF04545 Sigma-70, region 4 BF33_7 PF04542 Sigma-70 region 2 BF33_70 PF07690 Major Facilitator Superfamily BF33_702 PF01209 ubiE/COQ5 methyltransferase family BF33_704 PF09021 HutP BF33_705 PF00221 Aromatic amino acid lyase BF33_706 PF17391 Urocanase N-terminal domain BF33_706 PF01175 Urocanase Rossmann-like domain BF33_706 PF17392 Urocanase C-terminal domain BF33_707 PF01979 Amidohydrolase family BF33_708 PF00491 Arginase family BF33_709 PF02559 CarD-like/TRCF domain BF33_710 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BF33_711 PF01645 Conserved region in glutamate synthase BF33_712 PF00474 Sodium:solute symporter family BF33_713 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BF33_714 PF01738 Dienelactone hydrolase family BF33_715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF33_715 PF00512 His Kinase A (phospho-acceptor) domain BF33_715 PF00989 PAS fold BF33_715 PF13188 PAS domain BF33_715 PF13426 PAS domain BF33_717 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BF33_717 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BF33_72 PF12849 PBP superfamily domain BF33_723 PF05532 CsbD-like BF33_724 PF05532 CsbD-like BF33_727 PF13193 AMP-binding enzyme C-terminal domain BF33_727 PF00501 AMP-binding enzyme BF33_728 PF02632 BioY family BF33_729 PF00501 AMP-binding enzyme BF33_729 PF13193 AMP-binding enzyme C-terminal domain BF33_73 PF00528 Binding-protein-dependent transport system inner membrane component BF33_730 PF00108 Thiolase, N-terminal domain BF33_730 PF02803 Thiolase, C-terminal domain BF33_732 PF13344 Haloacid dehalogenase-like hydrolase BF33_732 PF00293 NUDIX domain BF33_733 PF01411 tRNA synthetases class II (A) BF33_733 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BF33_733 PF02272 DHHA1 domain BF33_735 PF07690 Major Facilitator Superfamily BF33_737 PF08179 Small acid-soluble spore protein P family BF33_739 PF01522 Polysaccharide deacetylase BF33_74 PF00528 Binding-protein-dependent transport system inner membrane component BF33_741 PF00330 Aconitase family (aconitate hydratase) BF33_741 PF00694 Aconitase C-terminal domain BF33_742 PF03412 Peptidase C39 family BF33_742 PF00005 ABC transporter BF33_742 PF00664 ABC transporter transmembrane region BF33_744 PF00578 AhpC/TSA family BF33_745 PF02811 PHP domain BF33_745 PF11490 DNA polymerase III polC-type N-terminus II BF33_745 PF07733 Bacterial DNA polymerase III alpha NTPase domain BF33_745 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BF33_745 PF14579 Helix-hairpin-helix motif BF33_745 PF00929 Exonuclease BF33_746 PF13040 Fur-regulated basic protein B BF33_747 PF08177 Small acid-soluble spore protein N family BF33_749 PF01476 LysM domain BF33_749 PF00704 Glycosyl hydrolases family 18 BF33_75 PF00005 ABC transporter BF33_750 PF03061 Thioesterase superfamily BF33_751 PF01521 Iron-sulphur cluster biosynthesis BF33_752 PF02660 Glycerol-3-phosphate acyltransferase BF33_753 PF03477 ATP cone domain BF33_753 PF13597 Anaerobic ribonucleoside-triphosphate reductase BF33_754 PF04055 Radical SAM superfamily BF33_755 PF00072 Response regulator receiver domain BF33_755 PF00486 Transcriptional regulatory protein, C terminal BF33_756 PF13180 PDZ domain BF33_757 PF13380 CoA binding domain BF33_758 PF01751 Toprim domain BF33_758 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BF33_758 PF00986 DNA gyrase B subunit, carboxyl terminus BF33_758 PF00204 DNA gyrase B BF33_759 PF03989 DNA gyrase C-terminal domain, beta-propeller BF33_759 PF00521 DNA gyrase/topoisomerase IV, subunit A BF33_76 PF01895 PhoU domain BF33_760 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BF33_760 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BF33_762 PF00005 ABC transporter BF33_762 PF13732 Domain of unknown function (DUF4162) BF33_764 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BF33_766 PF08281 Sigma-70, region 4 BF33_766 PF04542 Sigma-70 region 2 BF33_768 PF03816 Cell envelope-related transcriptional attenuator domain BF33_769 PF00375 Sodium:dicarboxylate symporter family BF33_77 PF00483 Nucleotidyl transferase BF33_770 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BF33_771 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BF33_772 PF13333 Integrase core domain BF33_772 PF00665 Integrase core domain BF33_772 PF13276 HTH-like domain BF33_775 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BF33_776 PF08241 Methyltransferase domain BF33_78 PF00471 Ribosomal protein L33 BF33_784 PF03323 Bacillus/Clostridium GerA spore germination protein BF33_786 PF00037 4Fe-4S binding domain BF33_786 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BF33_786 PF00384 Molybdopterin oxidoreductase BF33_786 PF01568 Molydopterin dinucleotide binding domain BF33_786 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BF33_787 PF07849 Protein of unknown function (DUF1641) BF33_788 PF10057 Uncharacterized conserved protein (DUF2294) BF33_789 PF02634 FdhD/NarQ family BF33_79 PF01812 5-formyltetrahydrofolate cyclo-ligase family BF33_790 PF06463 Molybdenum Cofactor Synthesis C BF33_790 PF04055 Radical SAM superfamily BF33_791 PF01226 Formate/nitrite transporter BF33_792 PF00899 ThiF family BF33_793 PF03453 MoeA N-terminal region (domain I and II) BF33_793 PF03454 MoeA C-terminal region (domain IV) BF33_793 PF00994 Probable molybdopterin binding domain BF33_794 PF02391 MoaE protein BF33_796 PF10609 NUBPL iron-transfer P-loop NTPase BF33_799 PF00892 EamA-like transporter family BF33_8 PF02666 Phosphatidylserine decarboxylase BF33_80 PF06014 Bacterial protein of unknown function (DUF910) BF33_800 PF02681 Divergent PAP2 family BF33_801 PF13249 Squalene-hopene cyclase N-terminal domain BF33_801 PF13243 Squalene-hopene cyclase C-terminal domain BF33_803 PF00171 Aldehyde dehydrogenase family BF33_805 PF00474 Sodium:solute symporter family BF33_806 PF01156 Inosine-uridine preferring nucleoside hydrolase BF33_808 PF14698 Argininosuccinate lyase C-terminal BF33_808 PF00206 Lyase BF33_81 PF00480 ROK family BF33_810 PF00106 short chain dehydrogenase BF33_812 PF00132 Bacterial transferase hexapeptide (six repeats) BF33_814 PF00293 NUDIX domain BF33_816 PF00258 Flavodoxin BF33_818 PF00313 'Cold-shock' DNA-binding domain BF33_82 PF10958 Protein of unknown function (DUF2759) BF33_822 PF13037 Domain of unknown function (DUF3898) BF33_822 PF13039 Protein of unknown function (DUF3900) BF33_824 PF04294 VanW like protein BF33_825 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BF33_828 PF02308 MgtC family BF33_829 PF01752 Collagenase BF33_829 PF18496 Collagenase G catalytic helper subdomain BF33_829 PF08453 Peptidase family M9 N-terminal BF33_83 PF00753 Metallo-beta-lactamase superfamily BF33_830 PF00378 Enoyl-CoA hydratase/isomerase BF33_831 PF00535 Glycosyl transferase family 2 BF33_832 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BF33_833 PF00132 Bacterial transferase hexapeptide (six repeats) BF33_839 PF01758 Sodium Bile acid symporter family BF33_841 PF04229 GrpB protein BF33_842 PF04299 Putative FMN-binding domain BF33_844 PF18801 response regulator aspartate phosphatase H, N terminal BF33_845 PF02696 Uncharacterized ACR, YdiU/UPF0061 family BF33_846 PF08240 Alcohol dehydrogenase GroES-like domain BF33_846 PF00107 Zinc-binding dehydrogenase BF33_847 PF01022 Bacterial regulatory protein, arsR family BF33_848 PF01494 FAD binding domain BF33_85 PF01022 Bacterial regulatory protein, arsR family BF33_851 PF03009 Glycerophosphoryl diester phosphodiesterase family BF33_854 PF03466 LysR substrate binding domain BF33_854 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BF33_855 PF07690 Major Facilitator Superfamily BF33_857 PF00144 Beta-lactamase BF33_858 PF01432 Peptidase family M3 BF33_858 PF08439 Oligopeptidase F BF33_859 PF00797 N-acetyltransferase BF33_860 PF09154 Domain of unknown function (DUF1939) BF33_860 PF00128 Alpha amylase, catalytic domain BF33_862 PF00488 MutS domain V BF33_862 PF01713 Smr domain BF33_865 PF08240 Alcohol dehydrogenase GroES-like domain BF33_865 PF00107 Zinc-binding dehydrogenase BF33_866 PF03466 LysR substrate binding domain BF33_866 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BF33_868 PF10901 Protein of unknown function (DUF2690) BF33_87 PF01053 Cys/Met metabolism PLP-dependent enzyme BF33_872 PF13170 Protein of unknown function (DUF4003) BF33_873 PF02567 Phenazine biosynthesis-like protein BF33_874 PF05675 Protein of unknown function (DUF817) BF33_875 PF01032 FecCD transport family BF33_876 PF01032 FecCD transport family BF33_877 PF01497 Periplasmic binding protein BF33_88 PF01053 Cys/Met metabolism PLP-dependent enzyme BF33_880 PF03600 Citrate transporter BF33_881 PF08830 Protein of unknown function (DUF1806) BF33_882 PF02585 GlcNAc-PI de-N-acetylase BF33_887 PF07690 Major Facilitator Superfamily BF33_888 PF00324 Amino acid permease BF33_889 PF08240 Alcohol dehydrogenase GroES-like domain BF33_889 PF00107 Zinc-binding dehydrogenase BF33_89 PF02574 Homocysteine S-methyltransferase BF33_89 PF02219 Methylenetetrahydrofolate reductase BF33_890 PF00753 Metallo-beta-lactamase superfamily BF33_898 PF00144 Beta-lactamase BF33_90 PF02574 Homocysteine S-methyltransferase BF33_90 PF00809 Pterin binding enzyme BF33_90 PF02965 Vitamin B12 dependent methionine synthase, activation domain BF33_90 PF02607 B12 binding domain BF33_90 PF02310 B12 binding domain BF33_904 PF00753 Metallo-beta-lactamase superfamily BF33_907 PF03063 Prismane/CO dehydrogenase family BF33_91 PF03033 Glycosyltransferase family 28 N-terminal domain BF33_91 PF04101 Glycosyltransferase family 28 C-terminal domain BF33_910 PF13732 Domain of unknown function (DUF4162) BF33_910 PF00005 ABC transporter BF33_911 PF01061 ABC-2 type transporter BF33_912 PF05656 Protein of unknown function (DUF805) BF33_916 PF00440 Bacterial regulatory proteins, tetR family BF33_918 PF00535 Glycosyl transferase family 2 BF33_918 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 BF33_919 PF04542 Sigma-70 region 2 BF33_920 PF12791 Anti-sigma factor N-terminus BF33_921 PF01522 Polysaccharide deacetylase BF33_921 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain BF33_922 PF01022 Bacterial regulatory protein, arsR family BF33_923 PF01638 HxlR-like helix-turn-helix BF33_924 PF02525 Flavodoxin-like fold BF33_925 PF00501 AMP-binding enzyme BF33_925 PF13193 AMP-binding enzyme C-terminal domain BF33_926 PF13302 Acetyltransferase (GNAT) domain BF33_930 PF02567 Phenazine biosynthesis-like protein BF33_936 PF00248 Aldo/keto reductase family BF33_937 PF01638 HxlR-like helix-turn-helix BF33_938 PF01638 HxlR-like helix-turn-helix BF33_940 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BF33_940 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BF33_941 PF07702 UTRA domain BF33_941 PF00392 Bacterial regulatory proteins, gntR family BF33_942 PF03960 ArsC family BF33_950 PF03928 Haem-degrading BF33_951 PF00248 Aldo/keto reductase family BF33_955 PF03413 Peptidase propeptide and YPEB domain BF33_955 PF07504 Fungalysin/Thermolysin Propeptide Motif BF33_955 PF01447 Thermolysin metallopeptidase, catalytic domain BF33_955 PF02868 Thermolysin metallopeptidase, alpha-helical domain BF33_956 PF00106 short chain dehydrogenase BF33_958 PF00107 Zinc-binding dehydrogenase BF33_958 PF08240 Alcohol dehydrogenase GroES-like domain BF33_959 PF00296 Luciferase-like monooxygenase BF33_961 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain BF33_961 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain BF33_962 PF02780 Transketolase, C-terminal domain BF33_962 PF00456 Transketolase, thiamine diphosphate binding domain BF33_962 PF02779 Transketolase, pyrimidine binding domain BF33_963 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain BF33_963 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BF33_964 PF00923 Transaldolase/Fructose-6-phosphate aldolase BF33_965 PF02447 GntP family permease BF33_966 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BF33_966 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BF33_967 PF10282 Lactonase, 7-bladed beta-propeller BF33_968 PF06906 Protein of unknown function (DUF1272) BF33_969 PF00805 Pentapeptide repeats (8 copies) BF33_97 PF00375 Sodium:dicarboxylate symporter family BF33_970 PF00892 EamA-like transporter family BF33_971 PF13411 MerR HTH family regulatory protein BF33_972 PF00571 CBS domain BF33_972 PF01595 Cyclin M transmembrane N-terminal domain BF33_972 PF03471 Transporter associated domain BF33_974 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BF33_978 PF07690 Major Facilitator Superfamily BF33_98 PF11117 Protein of unknown function (DUF2626) BF33_980 PF08241 Methyltransferase domain BF33_984 PF01594 AI-2E family transporter BF33_985 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain BF33_985 PF13288 DXP reductoisomerase C-terminal domain BF33_985 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase BF33_986 PF00579 tRNA synthetases class I (W and Y) BF33_988 PF02687 FtsX-like permease family BF33_988 PF00005 ABC transporter BF33_988 PF12704 MacB-like periplasmic core domain BF33_990 PF14602 Hexapeptide repeat of succinyl-transferase BF33_990 PF12464 Maltose acetyltransferase BF33_991 PF07690 Major Facilitator Superfamily BF33_992 PF00480 ROK family BF33_993 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BF33_995 PF13344 Haloacid dehalogenase-like hydrolase BF33_995 PF00293 NUDIX domain