locus-tag class description N7988_00005 PF00308 Bacterial dnaA protein N7988_00005 PF08299 Bacterial dnaA protein helix-turn-helix N7988_00005 PF11638 DnaA N-terminal domain N7988_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain N7988_00010 PF02767 DNA polymerase III beta subunit, central domain N7988_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain N7988_00020 PF02463 RecF/RecN/SMC N terminal domain N7988_00025 PF01751 Toprim domain N7988_00025 PF00204 DNA gyrase B N7988_00025 PF00986 DNA gyrase B subunit, carboxyl terminus N7988_00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N7988_00030 PF00521 DNA gyrase/topoisomerase IV, subunit A N7988_00030 PF03989 DNA gyrase C-terminal domain, beta-propeller N7988_00060 PF14175 YaaC-like Protein N7988_00065 PF00571 CBS domain N7988_00065 PF00478 IMP dehydrogenase / GMP reductase domain N7988_00070 PF07943 Penicillin-binding protein 5, C-terminal domain N7988_00070 PF00768 D-alanyl-D-alanine carboxypeptidase N7988_00075 PF01680 SOR/SNZ family N7988_00080 PF01174 SNO glutamine amidotransferase family N7988_00085 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) N7988_00085 PF02403 Seryl-tRNA synthetase N-terminal domain N7988_00100 PF01712 Deoxynucleoside kinase N7988_00105 PF01712 Deoxynucleoside kinase N7988_00110 PF00857 Isochorismatase family N7988_00115 PF14437 MafB19-like deaminase N7988_00125 PF12169 DNA polymerase III subunits gamma and tau domain III N7988_00130 PF02575 YbaB/EbfC DNA-binding family N7988_00135 PF02132 RecR protein N7988_00135 PF13662 Toprim domain N7988_00140 PF10704 Protein of unknown function (DUF2508) N7988_00145 PF07441 SigmaK-factor processing regulatory protein BofA N7988_00180 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain N7988_00180 PF01276 Orn/Lys/Arg decarboxylase, major domain N7988_00185 PF02223 Thymidylate kinase N7988_00190 PF09115 DNA polymerase III, delta subunit, C terminal N7988_00195 PF04468 PSP1 C-terminal conserved region N7988_00200 PF06156 Initiation control protein YabA N7988_00205 PF05175 Methyltransferase small domain N7988_00210 PF01541 GIY-YIG catalytic domain N7988_00215 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases N7988_00220 PF18277 AbrB C-terminal domain N7988_00220 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin N7988_00225 PF01588 Putative tRNA binding domain N7988_00225 PF08264 Anticodon-binding domain of tRNA N7988_00225 PF09334 tRNA synthetases class I (M) N7988_00230 PF01026 TatD related DNase N7988_00235 PF13662 Toprim domain N7988_00235 PF13331 Domain of unknown function (DUF4093) N7988_00240 PF00398 Ribosomal RNA adenine dimethylase N7988_00245 PF05582 YabG peptidase U57 N7988_00250 PF06257 Biofilm formation stimulator VEG N7988_00255 PF00269 Small, acid-soluble spore proteins, alpha/beta type N7988_00260 PF08544 GHMP kinases C terminal N7988_00260 PF00288 GHMP kinases N terminal domain N7988_00265 PF00156 Phosphoribosyl transferase domain N7988_00265 PF09182 Bacterial purine repressor, N-terminal N7988_00270 PF01042 Endoribonuclease L-PSP N7988_00275 PF04026 SpoVG N7988_00280 PF00132 Bacterial transferase hexapeptide (six repeats) N7988_00280 PF00483 Nucleotidyl transferase N7988_00285 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase N7988_00285 PF14572 Phosphoribosyl synthetase-associated domain N7988_00290 PF01195 Peptidyl-tRNA hydrolase N7988_00300 PF00271 Helicase conserved C-terminal domain N7988_00300 PF00270 DEAD/DEAH box helicase N7988_00300 PF03461 TRCF domain N7988_00300 PF17757 UvrB interaction domain N7988_00300 PF02559 CarD-like/TRCF domain N7988_00305 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin N7988_00305 PF15714 Stage V sporulation protein T C-terminal, transcription factor N7988_00310 PF01943 Polysaccharide biosynthesis protein N7988_00310 PF14667 Polysaccharide biosynthesis C-terminal domain N7988_00315 PF03819 MazG nucleotide pyrophosphohydrolase domain N7988_00315 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases N7988_00320 PF01479 S4 domain N7988_00325 PF07873 YabP family N7988_00330 PF09578 Spore cortex protein YabQ (Spore_YabQ) N7988_00340 PF00575 S1 RNA binding domain N7988_00355 PF07228 Stage II sporulation protein E (SpoIIE) N7988_00360 PF09179 TilS substrate binding domain N7988_00360 PF01171 PP-loop family N7988_00360 PF11734 TilS substrate C-terminal domain N7988_00365 PF00156 Phosphoribosyl transferase domain N7988_00370 PF00004 ATPase family associated with various cellular activities (AAA) N7988_00370 PF17862 AAA+ lid domain N7988_00370 PF06480 FtsH Extracellular N7988_00370 PF01434 Peptidase family M41 N7988_00375 PF03309 Type III pantothenate kinase N7988_00380 PF01430 Hsp33 protein N7988_00385 PF00291 Pyridoxal-phosphate dependent enzyme N7988_00390 PF00425 chorismate binding enzyme N7988_00390 PF04715 Anthranilate synthase component I, N terminal region N7988_00395 PF00117 Glutamine amidotransferase class-I N7988_00400 PF01063 Amino-transferase class IV N7988_00405 PF00809 Pterin binding enzyme N7988_00410 PF02152 Dihydroneopterin aldolase N7988_00415 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) N7988_00420 PF01381 Helix-turn-helix N7988_00425 PF01207 Dihydrouridine synthase (Dus) N7988_00430 PF00152 tRNA synthetases class II (D, K and N) N7988_00430 PF01336 OB-fold nucleic acid binding domain N7988_00510 PF17727 CtsR C-terminal dimerization domain N7988_00510 PF05848 CtsR N-terminal HTH domain N7988_00515 PF02151 UvrB/uvrC motif N7988_00520 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain N7988_00525 PF17871 AAA lid domain N7988_00525 PF10431 C-terminal, D2-small domain, of ClpB protein N7988_00525 PF02861 Clp amino terminal domain, pathogenicity island component N7988_00525 PF07724 AAA domain (Cdc48 subfamily) N7988_00525 PF00004 ATPase family associated with various cellular activities (AAA) N7988_00530 PF18073 Rubredoxin metal binding domain N7988_00535 PF02457 DisA bacterial checkpoint controller nucleotide-binding N7988_00535 PF10635 DisA bacterial checkpoint controller linker region N7988_00545 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase N7988_00550 PF02542 YgbB family N7988_00555 PF00749 tRNA synthetases class I (E and Q), catalytic domain N7988_00560 PF06426 Serine acetyltransferase, N-terminal N7988_00560 PF00132 Bacterial transferase hexapeptide (six repeats) N7988_00565 PF01406 tRNA synthetases class I (C) catalytic domain N7988_00565 PF09190 DALR domain N7988_00570 PF00636 Ribonuclease III domain N7988_00575 PF00588 SpoU rRNA Methylase family N7988_00575 PF08032 RNA 2'-O ribose methyltransferase substrate binding N7988_00580 PF05991 YacP-like NYN domain N7988_00585 PF04542 Sigma-70 region 2 N7988_00585 PF08281 Sigma-70, region 4 N7988_00590 PF00471 Ribosomal protein L33 N7988_00595 PF00584 SecE/Sec61-gamma subunits of protein translocation complex N7988_00600 PF00467 KOW motif N7988_00600 PF02357 Transcription termination factor nusG N7988_00605 PF00298 Ribosomal protein L11, RNA binding domain N7988_00605 PF03946 Ribosomal protein L11, N-terminal domain N7988_00610 PF00687 Ribosomal protein L1p/L10e family N7988_00615 PF00466 Ribosomal protein L10 N7988_00620 PF00542 Ribosomal protein L7/L12 C-terminal domain N7988_00620 PF16320 Ribosomal protein L7/L12 dimerisation domain N7988_00625 PF05175 Methyltransferase small domain N7988_00630 PF04560 RNA polymerase Rpb2, domain 7 N7988_00630 PF00562 RNA polymerase Rpb2, domain 6 N7988_00630 PF10385 RNA polymerase beta subunit external 1 domain N7988_00630 PF04561 RNA polymerase Rpb2, domain 2 N7988_00630 PF04563 RNA polymerase beta subunit N7988_00630 PF04565 RNA polymerase Rpb2, domain 3 N7988_00635 PF04997 RNA polymerase Rpb1, domain 1 N7988_00635 PF00623 RNA polymerase Rpb1, domain 2 N7988_00635 PF04983 RNA polymerase Rpb1, domain 3 N7988_00635 PF04998 RNA polymerase Rpb1, domain 5 N7988_00635 PF05000 RNA polymerase Rpb1, domain 4 N7988_00640 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family N7988_00645 PF00164 Ribosomal protein S12/S23 N7988_00650 PF00177 Ribosomal protein S7p/S5e N7988_00655 PF14492 Elongation Factor G, domain II N7988_00655 PF03764 Elongation factor G, domain IV N7988_00655 PF00009 Elongation factor Tu GTP binding domain N7988_00655 PF03144 Elongation factor Tu domain 2 N7988_00655 PF00679 Elongation factor G C-terminus N7988_00660 PF00009 Elongation factor Tu GTP binding domain N7988_00660 PF03143 Elongation factor Tu C-terminal domain N7988_00660 PF03144 Elongation factor Tu domain 2 N7988_00665 PF00338 Ribosomal protein S10p/S20e N7988_00670 PF00297 Ribosomal protein L3 N7988_00675 PF00573 Ribosomal protein L4/L1 family N7988_00680 PF00276 Ribosomal protein L23 N7988_00685 PF03947 Ribosomal Proteins L2, C-terminal domain N7988_00685 PF00181 Ribosomal Proteins L2, RNA binding domain N7988_00690 PF00203 Ribosomal protein S19 N7988_00695 PF00237 Ribosomal protein L22p/L17e N7988_00700 PF00189 Ribosomal protein S3, C-terminal domain N7988_00700 PF07650 KH domain N7988_00705 PF00252 Ribosomal protein L16p/L10e N7988_00710 PF00831 Ribosomal L29 protein N7988_00715 PF00366 Ribosomal protein S17 N7988_00720 PF00238 Ribosomal protein L14p/L23e N7988_00725 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 N7988_00725 PF00467 KOW motif N7988_00730 PF00673 ribosomal L5P family C-terminus N7988_00730 PF00281 Ribosomal protein L5 N7988_00735 PF00253 Ribosomal protein S14p/S29e N7988_00740 PF00410 Ribosomal protein S8 N7988_00745 PF00347 Ribosomal protein L6 N7988_00750 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast N7988_00755 PF03719 Ribosomal protein S5, C-terminal domain N7988_00755 PF00333 Ribosomal protein S5, N-terminal domain N7988_00760 PF00327 Ribosomal protein L30p/L7e N7988_00765 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A N7988_00770 PF00344 SecY translocase N7988_00775 PF05191 Adenylate kinase, active site lid N7988_00780 PF00557 Metallopeptidase family M24 N7988_00785 PF01176 Translation initiation factor 1A / IF-1 N7988_00790 PF00444 Ribosomal protein L36 N7988_00795 PF00416 Ribosomal protein S13/S18 N7988_00800 PF00411 Ribosomal protein S11 N7988_00805 PF01000 RNA polymerase Rpb3/RpoA insert domain N7988_00805 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain N7988_00805 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain N7988_00810 PF01196 Ribosomal protein L17 N7988_00815 PF00005 ABC transporter N7988_00820 PF00005 ABC transporter N7988_00825 PF02361 Cobalt transport protein N7988_00830 PF01416 tRNA pseudouridine synthase N7988_00835 PF00572 Ribosomal protein L13 N7988_00840 PF00380 Ribosomal protein S9/S16 N7988_00850 PF01520 N-acetylmuramoyl-L-alanine amidase N7988_00855 PF10609 NUBPL iron-transfer P-loop NTPase N7988_00860 PF17898 Spore germination GerD central core domain N7988_00865 PF14089 KinB-signalling pathway activation in sporulation N7988_00870 PF01522 Polysaccharide deacetylase N7988_00940 PF02595 Glycerate kinase family N7988_00945 PF00491 Arginase family N7988_00950 PF02457 DisA bacterial checkpoint controller nucleotide-binding N7988_00955 PF07949 YbbR-like protein N7988_00960 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I N7988_00960 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II N7988_00960 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III N7988_00960 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain N7988_00970 PF01380 SIS domain N7988_00975 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region N7988_00975 PF00326 Prolyl oligopeptidase family N7988_00995 PF00528 Binding-protein-dependent transport system inner membrane component N7988_01000 PF09383 NIL domain N7988_01000 PF00005 ABC transporter N7988_01005 PF03180 NLPA lipoprotein N7988_01010 PF00107 Zinc-binding dehydrogenase N7988_01010 PF08240 Alcohol dehydrogenase GroES-like domain N7988_01020 PF01565 FAD binding domain N7988_01025 PF07690 Major Facilitator Superfamily N7988_01035 PF07690 Major Facilitator Superfamily N7988_01065 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle N7988_01070 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle N7988_01075 PF00248 Aldo/keto reductase family N7988_01080 PF03807 NADP oxidoreductase coenzyme F420-dependent N7988_01080 PF14748 Pyrroline-5-carboxylate reductase dimerisation N7988_01085 PF06800 Sugar transport protein N7988_01090 PF00528 Binding-protein-dependent transport system inner membrane component N7988_01100 PF12728 Helix-turn-helix domain N7988_01100 PF12727 PBP superfamily domain N7988_01110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N7988_01110 PF03466 LysR substrate binding domain N7988_01115 PF00892 EamA-like transporter family N7988_01120 PF14142 YrzO-like protein N7988_01130 PF01553 Acyltransferase N7988_01140 PF00356 Bacterial regulatory proteins, lacI family N7988_01140 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family N7988_01150 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) N7988_01150 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 N7988_01165 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) N7988_01190 PF00005 ABC transporter N7988_01190 PF16326 ABC transporter C-terminal domain N7988_01190 PF12848 ABC transporter N7988_01200 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle N7988_01205 PF00528 Binding-protein-dependent transport system inner membrane component N7988_01210 PF00528 Binding-protein-dependent transport system inner membrane component N7988_01210 PF12911 N-terminal TM domain of oligopeptide transport permease C N7988_01215 PF08352 Oligopeptide/dipeptide transporter, C-terminal region N7988_01215 PF00005 ABC transporter N7988_01220 PF08352 Oligopeptide/dipeptide transporter, C-terminal region N7988_01220 PF00005 ABC transporter N7988_01255 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily N7988_01260 PF01557 Fumarylacetoacetate (FAA) hydrolase family N7988_01270 PF13520 Amino acid permease N7988_01275 PF07690 Major Facilitator Superfamily N7988_01280 PF01820 D-ala D-ala ligase N-terminus N7988_01280 PF07478 D-ala D-ala ligase C-terminus N7988_01285 PF08245 Mur ligase middle domain N7988_01285 PF02875 Mur ligase family, glutamate ligase domain N7988_01285 PF01225 Mur ligase family, catalytic domain N7988_01290 PF00271 Helicase conserved C-terminal domain N7988_01290 PF00270 DEAD/DEAH box helicase N7988_01295 PF03851 UV-endonuclease UvdE N7988_01300 PF01694 Rhomboid family N7988_01305 PF01648 4'-phosphopantetheinyl transferase superfamily N7988_01315 PF01168 Alanine racemase, N-terminal domain N7988_01315 PF00842 Alanine racemase, C-terminal domain N7988_01320 PF01402 Ribbon-helix-helix protein, copG family N7988_01325 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system N7988_01330 PF17674 HHH domain N7988_01330 PF00575 S1 RNA binding domain N7988_01330 PF09371 Tex-like protein N-terminal domain N7988_01330 PF16921 Tex protein YqgF-like domain N7988_01340 PF10263 SprT-like family N7988_01340 PF17283 SprT-like zinc ribbon domain N7988_01430 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE N7988_01435 PF00814 Glycoprotease family N7988_01440 PF00583 Acetyltransferase (GNAT) family N7988_01445 PF00814 Glycoprotease family N7988_01450 PF00005 ABC transporter N7988_01450 PF16326 ABC transporter C-terminal domain N7988_01450 PF12848 ABC transporter N7988_01455 PF06971 Putative DNA-binding protein N-terminus N7988_01455 PF02629 CoA binding domain N7988_01465 PF02517 CPBP intramembrane metalloprotease N7988_01470 PF00166 Chaperonin 10 Kd subunit N7988_01475 PF00118 TCP-1/cpn60 chaperonin family N7988_01480 PF00117 Glutamine amidotransferase class-I N7988_01480 PF00958 GMP synthase C terminal domain N7988_01480 PF02540 NAD synthase N7988_01485 PF00860 Permease family N7988_01490 PF00072 Response regulator receiver domain N7988_01490 PF00486 Transcriptional regulatory protein, C terminal N7988_01495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N7988_01495 PF00512 His Kinase A (phospho-acceptor) domain N7988_01495 PF00989 PAS fold N7988_01495 PF16736 Single Cache-like N7988_01520 PF01323 DSBA-like thioredoxin domain N7988_01545 PF02673 Bacitracin resistance protein BacA N7988_01555 PF00005 ABC transporter N7988_01560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N7988_01560 PF00512 His Kinase A (phospho-acceptor) domain N7988_01565 PF00072 Response regulator receiver domain N7988_01565 PF00486 Transcriptional regulatory protein, C terminal N7988_01585 PF05045 Rhamnan synthesis protein F N7988_01585 PF14307 Glycosyltransferase WbsX N7988_01605 PF16363 GDP-mannose 4,6 dehydratase N7988_01615 PF00535 Glycosyl transferase family 2 N7988_01635 PF00892 EamA-like transporter family N7988_01665 PF00731 AIR carboxylase N7988_01670 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain N7988_01670 PF02222 ATP-grasp domain N7988_01675 PF00206 Lyase N7988_01675 PF10397 Adenylosuccinate lyase C-terminus N7988_01680 PF01259 SAICAR synthetase N7988_01685 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase N7988_01695 PF00586 AIR synthase related protein, N-terminal domain N7988_01695 PF02769 AIR synthase related protein, C-terminal domain N7988_01695 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain N7988_01700 PF00156 Phosphoribosyl transferase domain N7988_01705 PF00586 AIR synthase related protein, N-terminal domain N7988_01705 PF02769 AIR synthase related protein, C-terminal domain N7988_01710 PF00551 Formyl transferase N7988_01715 PF01808 AICARFT/IMPCHase bienzyme N7988_01715 PF02142 MGS-like domain N7988_01720 PF02844 Phosphoribosylglycinamide synthetase, N domain N7988_01720 PF02843 Phosphoribosylglycinamide synthetase, C domain N7988_01720 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain N7988_01740 PF01884 PcrB family N7988_01745 PF13361 UvrD-like helicase C-terminal domain N7988_01745 PF00580 UvrD/REP helicase N-terminal domain N7988_01750 PF12826 Helix-hairpin-helix motif N7988_01750 PF01653 NAD-dependent DNA ligase adenylation domain N7988_01750 PF03120 NAD-dependent DNA ligase OB-fold domain N7988_01750 PF03119 NAD-dependent DNA ligase C4 zinc finger domain N7988_01750 PF00533 BRCA1 C Terminus (BRCT) domain N7988_01755 PF07537 CamS sex pheromone cAM373 precursor N7988_01760 PF01925 Sulfite exporter TauE/SafE N7988_01765 PF00171 Aldehyde dehydrogenase family N7988_01770 PF00857 Isochorismatase family N7988_01775 PF09383 NIL domain N7988_01775 PF00005 ABC transporter N7988_01780 PF00528 Binding-protein-dependent transport system inner membrane component N7988_01785 PF03180 NLPA lipoprotein N7988_01800 PF02374 Anion-transporting ATPase N7988_01800 PF17886 HSP20-like domain found in ArsA N7988_01805 PF01047 MarR family N7988_01810 PF05360 yiaA/B two helix domain N7988_01815 PF02686 Glu-tRNAGln amidotransferase C subunit N7988_01820 PF01425 Amidase N7988_01825 PF02934 GatB/GatE catalytic domain N7988_01825 PF02637 GatB domain N7988_01830 PF00781 Diacylglycerol kinase catalytic domain N7988_01835 PF13419 Haloacid dehalogenase-like hydrolase N7988_01840 PF00202 Aminotransferase class-III N7988_01845 PF00158 Sigma-54 interaction domain N7988_01850 PF00171 Aldehyde dehydrogenase family N7988_01855 PF00893 Small Multidrug Resistance protein N7988_01865 PF02073 Thermophilic metalloprotease (M29) N7988_01885 PF07670 Nucleoside recognition N7988_01885 PF07662 Na+ dependent nucleoside transporter C-terminus N7988_01885 PF01773 Na+ dependent nucleoside transporter N-terminus N7988_01890 PF13847 Methyltransferase domain N7988_01890 PF05958 tRNA (Uracil-5-)-methyltransferase N7988_01890 PF01938 TRAM domain N7988_01895 PF01207 Dihydrouridine synthase (Dus) N7988_01900 PF07308 Protein of unknown function (DUF1456) N7988_01915 PF13378 Enolase C-terminal domain-like N7988_01915 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain N7988_01930 PF01546 Peptidase family M20/M25/M40 N7988_01930 PF07687 Peptidase dimerisation domain N7988_01940 PF13192 Thioredoxin domain N7988_01940 PF07992 Pyridine nucleotide-disulphide oxidoreductase N7988_01945 PF00578 AhpC/TSA family N7988_01950 PF01636 Phosphotransferase enzyme family N7988_01955 PF01008 Initiation factor 2 subunit family N7988_01960 PF00596 Class II Aldolase and Adducin N-terminal domain N7988_01965 PF01032 FecCD transport family N7988_01970 PF01032 FecCD transport family N7988_01975 PF01497 Periplasmic binding protein N7988_01980 PF07992 Pyridine nucleotide-disulphide oxidoreductase N7988_01990 PF12728 Helix-turn-helix domain N7988_02015 PF13426 PAS domain N7988_02015 PF13188 PAS domain N7988_02015 PF00989 PAS fold N7988_02015 PF00512 His Kinase A (phospho-acceptor) domain N7988_02015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N7988_02035 PF10127 RNA repair pathway DNA polymerase beta family N7988_02040 PF07690 Major Facilitator Superfamily N7988_02045 PF01266 FAD dependent oxidoreductase N7988_02045 PF00355 Rieske [2Fe-2S] domain N7988_02055 PF00528 Binding-protein-dependent transport system inner membrane component N7988_02060 PF00497 Bacterial extracellular solute-binding proteins, family 3 N7988_02065 PF00005 ABC transporter N7988_02070 PF12729 Four helix bundle sensory module for signal transduction N7988_02070 PF00672 HAMP domain N7988_02070 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N7988_02075 PF01316 Arginine repressor, DNA binding domain N7988_02075 PF02863 Arginine repressor, C-terminal domain N7988_02085 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain N7988_02085 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain N7988_02090 PF13520 Amino acid permease N7988_02095 PF00696 Amino acid kinase family N7988_02100 PF13545 Crp-like helix-turn-helix domain N7988_02100 PF00027 Cyclic nucleotide-binding domain N7988_02115 PF00128 Alpha amylase, catalytic domain N7988_02115 PF16657 Maltogenic Amylase, C-terminal domain N7988_02120 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 N7988_02120 PF00367 phosphotransferase system, EIIB N7988_02120 PF02378 Phosphotransferase system, EIIC N7988_02125 PF03372 Endonuclease/Exonuclease/phosphatase family N7988_02130 PF01061 ABC-2 type transporter N7988_02135 PF01131 DNA topoisomerase N7988_02135 PF01751 Toprim domain N7988_02140 PF02110 Hydroxyethylthiazole kinase family N7988_02145 PF02581 Thiamine monophosphate synthase N7988_02150 PF03605 Anaerobic c4-dicarboxylate membrane transporter N7988_02155 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N7988_02155 PF00672 HAMP domain N7988_02160 PF00550 Phosphopantetheine attachment site N7988_02160 PF00501 AMP-binding enzyme N7988_02160 PF13193 AMP-binding enzyme C-terminal domain N7988_02160 PF00668 Condensation domain N7988_02160 PF00975 Thioesterase domain N7988_02165 PF01910 Thiamine-binding protein N7988_02170 PF00528 Binding-protein-dependent transport system inner membrane component N7988_02180 PF00005 ABC transporter N7988_02185 PF00041 Fibronectin type III domain N7988_02185 PF00704 Glycosyl hydrolases family 18 N7988_02210 PF08360 QacR-like protein, C-terminal region N7988_02210 PF00440 Bacterial regulatory proteins, tetR family N7988_02225 PF11700 Vacuole effluxer Atg22 like N7988_02240 PF09180 Prolyl-tRNA synthetase, C-terminal N7988_02240 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) N7988_02240 PF03129 Anticodon binding domain N7988_02250 PF00480 ROK family N7988_02255 PF02342 TerD domain N7988_02260 PF02342 TerD domain N7988_02265 PF02342 TerD domain N7988_02270 PF03741 Integral membrane protein TerC family N7988_02275 PF14266 Putative component of 'biosynthetic module' N7988_02280 PF05816 Toxic anion resistance protein (TelA) N7988_02285 PF00689 Cation transporting ATPase, C-terminus N7988_02285 PF00690 Cation transporter/ATPase, N-terminus N7988_02290 PF06569 Protein of unknown function (DUF1128) N7988_02295 PF01451 Low molecular weight phosphotyrosine protein phosphatase N7988_02305 PF03631 Virulence factor BrkB N7988_02315 PF00892 EamA-like transporter family N7988_02325 PF10502 Signal peptidase, peptidase S26 N7988_02335 PF09335 SNARE associated Golgi protein N7988_02350 PF16242 Pyridoxamine 5'-phosphate oxidase like N7988_02355 PF01699 Sodium/calcium exchanger protein N7988_02360 PF14167 YfkD-like protein N7988_02365 PF04055 Radical SAM superfamily N7988_02365 PF08756 YfkB-like domain N7988_02375 PF05681 Fumarate hydratase (Fumerase) N7988_02375 PF05683 Fumarase C-terminus N7988_02380 PF01522 Polysaccharide deacetylase N7988_02385 PF00730 HhH-GPD superfamily base excision DNA repair protein N7988_02390 PF05958 tRNA (Uracil-5-)-methyltransferase N7988_02390 PF01938 TRAM domain N7988_02395 PF01416 tRNA pseudouridine synthase N7988_02405 PF02954 Bacterial regulatory protein, Fis family N7988_02405 PF13426 PAS domain N7988_02405 PF00158 Sigma-54 interaction domain N7988_02415 PF00324 Amino acid permease N7988_02445 PF04960 Glutaminase N7988_02450 PF00367 phosphotransferase system, EIIB N7988_02450 PF02378 Phosphotransferase system, EIIC N7988_02455 PF00144 Beta-lactamase N7988_02470 PF00535 Glycosyl transferase family 2 N7988_02475 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain N7988_02475 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain N7988_02475 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain N7988_02480 PF01370 NAD dependent epimerase/dehydratase family N7988_02480 PF02911 Formyl transferase, C-terminal domain N7988_02480 PF00551 Formyl transferase N7988_02485 PF00535 Glycosyl transferase family 2 N7988_02495 PF01228 Glycine radical N7988_02495 PF02901 Pyruvate formate lyase-like N7988_02500 PF04055 Radical SAM superfamily N7988_02505 PF04101 Glycosyltransferase family 28 C-terminal domain N7988_02505 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase N7988_02520 PF01979 Amidohydrolase family N7988_02525 PF08338 Domain of unknown function (DUF1731) N7988_02525 PF01370 NAD dependent epimerase/dehydratase family N7988_02530 PF02631 RecX family N7988_02545 PF08176 Small acid-soluble spore protein K family N7988_02550 PF14043 WVELL protein N7988_02555 PF04307 LexA-binding, inner membrane-associated putative hydrolase N7988_02560 PF14815 NUDIX domain N7988_02560 PF00730 HhH-GPD superfamily base excision DNA repair protein N7988_02570 PF04259 Small, acid-soluble spore protein, gamma-type N7988_02575 PF14182 YgaB-like protein N7988_02580 PF04167 Protein of unknown function (DUF402) N7988_02585 PF00664 ABC transporter transmembrane region N7988_02585 PF00005 ABC transporter N7988_02590 PF06081 Aromatic acid exporter family member 1 N7988_02595 PF00310 Glutamine amidotransferases class-II N7988_02595 PF04898 Glutamate synthase central domain N7988_02595 PF01645 Conserved region in glutamate synthase N7988_02595 PF01493 GXGXG motif N7988_02600 PF00202 Aminotransferase class-III N7988_02605 PF00005 ABC transporter N7988_02620 PF07885 Ion channel N7988_02625 PF00578 AhpC/TSA family N7988_02630 PF01475 Ferric uptake regulator family N7988_02640 PF11023 Zinc-ribbon containing domain N7988_02740 PF01709 Transcriptional regulator N7988_02745 PF00293 NUDIX domain N7988_02745 PF13344 Haloacid dehalogenase-like hydrolase N7988_02750 PF00912 Transglycosylase N7988_02750 PF00905 Penicillin binding protein transpeptidase domain N7988_02755 PF13462 Thioredoxin N7988_02765 PF08331 Domain of unknown function (DUF1730) N7988_02770 PF12671 Putative amidase domain N7988_02775 PF00588 SpoU rRNA Methylase family N7988_02780 PF00990 Diguanylate cyclase, GGDEF domain N7988_02780 PF00498 FHA domain N7988_02780 PF00563 EAL domain N7988_02785 PF06798 PrkA serine protein kinase C-terminal domain N7988_02785 PF08298 PrkA AAA domain N7988_02790 PF04285 Protein of unknown function (DUF444) N7988_02805 PF02028 BCCT, betaine/carnitine/choline family transporter N7988_02810 PF08453 Peptidase family M9 N-terminal N7988_02810 PF01752 Collagenase N7988_02810 PF18496 Collagenase G catalytic helper subdomain N7988_02820 PF15975 Flotillin N7988_02820 PF01145 SPFH domain / Band 7 family N7988_02825 PF00672 HAMP domain N7988_02825 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N7988_02825 PF02743 Cache domain N7988_02830 PF17203 Single cache domain 3 N7988_02830 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain N7988_02830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N7988_02830 PF00989 PAS fold N7988_02835 PF00072 Response regulator receiver domain N7988_02835 PF12431 Transcriptional regulator N7988_02840 PF03600 Citrate transporter N7988_02865 PF04309 Glycerol-3-phosphate responsive antiterminator N7988_02870 PF17912 MalK OB fold domain N7988_02870 PF00005 ABC transporter N7988_02875 PF00528 Binding-protein-dependent transport system inner membrane component N7988_02880 PF00528 Binding-protein-dependent transport system inner membrane component N7988_02885 PF13416 Bacterial extracellular solute-binding protein N7988_02890 PF00149 Calcineurin-like phosphoesterase N7988_02895 PF00486 Transcriptional regulatory protein, C terminal N7988_02895 PF00072 Response regulator receiver domain N7988_02900 PF00512 His Kinase A (phospho-acceptor) domain N7988_02900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N7988_02900 PF00672 HAMP domain N7988_02910 PF13529 Peptidase_C39 like family N7988_02915 PF00672 HAMP domain N7988_02915 PF02743 Cache domain N7988_02915 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N7988_02920 PF17203 Single cache domain 3 N7988_02920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N7988_02920 PF00989 PAS fold N7988_02920 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain N7988_02925 PF00072 Response regulator receiver domain N7988_02930 PF03390 2-hydroxycarboxylate transporter family N7988_02935 PF00390 Malic enzyme, N-terminal domain N7988_02935 PF03949 Malic enzyme, NAD binding domain N7988_02945 PF00892 EamA-like transporter family N7988_02950 PF00155 Aminotransferase class I and II N7988_02950 PF00392 Bacterial regulatory proteins, gntR family N7988_02960 PF00512 His Kinase A (phospho-acceptor) domain N7988_02960 PF00672 HAMP domain N7988_02960 PF00989 PAS fold N7988_02960 PF18698 Histidine kinase sensor domain N7988_02960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N7988_02965 PF00072 Response regulator receiver domain N7988_02965 PF00486 Transcriptional regulatory protein, C terminal N7988_02975 PF13508 Acetyltransferase (GNAT) domain N7988_02975 PF00583 Acetyltransferase (GNAT) family N7988_02980 PF02634 FdhD/NarQ family N7988_02985 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region N7988_02985 PF01568 Molydopterin dinucleotide binding domain N7988_02985 PF00384 Molybdopterin oxidoreductase N7988_02985 PF04879 Molybdopterin oxidoreductase Fe4S4 domain N7988_02985 PF00037 4Fe-4S binding domain N7988_02990 PF07849 Protein of unknown function (DUF1641) N7988_03000 PF05222 Alanine dehydrogenase/PNT, N-terminal domain N7988_03000 PF01262 Alanine dehydrogenase/PNT, C-terminal domain N7988_03005 PF13520 Amino acid permease N7988_03015 PF01022 Bacterial regulatory protein, arsR family N7988_03020 PF00403 Heavy-metal-associated domain N7988_03025 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain N7988_03025 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain N7988_03025 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family N7988_03040 PF02868 Thermolysin metallopeptidase, alpha-helical domain N7988_03040 PF01447 Thermolysin metallopeptidase, catalytic domain N7988_03040 PF07504 Fungalysin/Thermolysin Propeptide Motif N7988_03040 PF03413 Peptidase propeptide and YPEB domain N7988_03060 PF04294 VanW like protein N7988_03065 PF03816 Cell envelope-related transcriptional attenuator domain N7988_03070 PF01773 Na+ dependent nucleoside transporter N-terminus N7988_03070 PF07662 Na+ dependent nucleoside transporter C-terminus N7988_03075 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily N7988_03080 PF00571 CBS domain N7988_03080 PF03471 Transporter associated domain N7988_03080 PF01595 Cyclin M transmembrane N-terminal domain N7988_03085 PF10415 Fumarase C C-terminus N7988_03085 PF00206 Lyase N7988_03090 PF02652 L-lactate permease N7988_03095 PF01022 Bacterial regulatory protein, arsR family N7988_03100 PF08141 Small acid-soluble spore protein H family N7988_03105 PF00854 POT family N7988_03110 PF01497 Periplasmic binding protein N7988_03115 PF01032 FecCD transport family N7988_03120 PF01032 FecCD transport family N7988_03125 PF00005 ABC transporter N7988_03130 PF08241 Methyltransferase domain N7988_03135 PF00155 Aminotransferase class I and II N7988_03140 PF01370 NAD dependent epimerase/dehydratase family N7988_03145 PF13344 Haloacid dehalogenase-like hydrolase N7988_03145 PF00293 NUDIX domain N7988_03150 PF00092 von Willebrand factor type A domain N7988_03155 PF07728 AAA domain (dynein-related subfamily) N7988_03160 PF13396 Phospholipase_D-nuclease N-terminal N7988_03160 PF13091 PLD-like domain N7988_03170 PF03707 Bacterial signalling protein N terminal repeat N7988_03170 PF00563 EAL domain N7988_03170 PF00990 Diguanylate cyclase, GGDEF domain N7988_03175 PF13520 Amino acid permease N7988_03180 PF00392 Bacterial regulatory proteins, gntR family N7988_03180 PF07702 UTRA domain N7988_03185 PF00367 phosphotransferase system, EIIB N7988_03185 PF02378 Phosphotransferase system, EIIC N7988_03190 PF00128 Alpha amylase, catalytic domain N7988_03190 PF16657 Maltogenic Amylase, C-terminal domain N7988_03205 PF03323 Bacillus/Clostridium GerA spore germination protein N7988_03210 PF01636 Phosphotransferase enzyme family N7988_03215 PF01235 Sodium:alanine symporter family N7988_03220 PF00005 ABC transporter N7988_03225 PF00497 Bacterial extracellular solute-binding proteins, family 3 N7988_03230 PF00528 Binding-protein-dependent transport system inner membrane component N7988_03235 PF00528 Binding-protein-dependent transport system inner membrane component N7988_03240 PF00324 Amino acid permease N7988_03255 PF04542 Sigma-70 region 2 N7988_03255 PF08281 Sigma-70, region 4 N7988_03265 PF08279 HTH domain N7988_03265 PF13280 WYL domain N7988_03270 PF01872 RibD C-terminal domain N7988_03275 PF18698 Histidine kinase sensor domain N7988_03275 PF00512 His Kinase A (phospho-acceptor) domain N7988_03275 PF00989 PAS fold N7988_03275 PF00672 HAMP domain N7988_03275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N7988_03280 PF00486 Transcriptional regulatory protein, C terminal N7988_03280 PF00072 Response regulator receiver domain N7988_03295 PF00582 Universal stress protein family N7988_03305 PF07690 Major Facilitator Superfamily N7988_03310 PF01047 MarR family N7988_03315 PF07690 Major Facilitator Superfamily N7988_03320 PF00356 Bacterial regulatory proteins, lacI family N7988_03325 PF00294 pfkB family carbohydrate kinase N7988_03330 PF05025 RbsD / FucU transport protein family N7988_03335 PF00005 ABC transporter N7988_03340 PF02653 Branched-chain amino acid transport system / permease component N7988_03345 PF13407 Periplasmic binding protein domain N7988_03350 PF00923 Transaldolase/Fructose-6-phosphate aldolase N7988_03355 PF05547 Immune inhibitor A peptidase M6 N7988_03375 PF08240 Alcohol dehydrogenase GroES-like domain N7988_03375 PF00107 Zinc-binding dehydrogenase N7988_03385 PF00882 Zinc dependent phospholipase C N7988_03390 PF03372 Endonuclease/Exonuclease/phosphatase family N7988_03420 PF02673 Bacitracin resistance protein BacA N7988_03425 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N7988_03425 PF00672 HAMP domain N7988_03425 PF02743 Cache domain N7988_03430 PF06725 3D domain N7988_03430 PF03990 G5-linked-Ubiquitin-like domain N7988_03430 PF07501 G5 domain N7988_03435 PF01381 Helix-turn-helix N7988_03445 PF04203 Sortase domain N7988_03455 PF00854 POT family N7988_03460 PF05525 Branched-chain amino acid transport protein N7988_03475 PF00324 Amino acid permease N7988_03480 PF00860 Permease family N7988_03495 PF13673 Acetyltransferase (GNAT) domain N7988_03505 PF02254 TrkA-N domain N7988_03505 PF02080 TrkA-C domain N7988_03505 PF00999 Sodium/hydrogen exchanger family N7988_03515 PF00510 Cytochrome c oxidase subunit III N7988_03520 PF00115 Cytochrome C and Quinol oxidase polypeptide I N7988_03525 PF02790 Cytochrome C oxidase subunit II, transmembrane domain N7988_03530 PF00324 Amino acid permease N7988_03535 PF13529 Peptidase_C39 like family N7988_03540 PF01546 Peptidase family M20/M25/M40 N7988_03540 PF07687 Peptidase dimerisation domain N7988_03545 PF11755 Protein of unknown function (DUF3311) N7988_03550 PF00474 Sodium:solute symporter family N7988_03555 PF03323 Bacillus/Clostridium GerA spore germination protein N7988_03560 PF03845 Spore germination protein N7988_03565 PF05504 Spore germination B3/ GerAC like, C-terminal N7988_03575 PF07670 Nucleoside recognition N7988_03575 PF02421 Ferrous iron transport protein B N7988_03575 PF17910 FeoB cytosolic helical domain N7988_03575 PF07664 Ferrous iron transport protein B C terminus N7988_03580 PF17910 FeoB cytosolic helical domain N7988_03580 PF07664 Ferrous iron transport protein B C terminus N7988_03580 PF02421 Ferrous iron transport protein B N7988_03580 PF07670 Nucleoside recognition N7988_03585 PF17910 FeoB cytosolic helical domain N7988_03585 PF02421 Ferrous iron transport protein B N7988_03585 PF07670 Nucleoside recognition N7988_03585 PF04023 FeoA domain N7988_03585 PF07664 Ferrous iron transport protein B C terminus N7988_03590 PF12849 PBP superfamily domain N7988_03595 PF00528 Binding-protein-dependent transport system inner membrane component N7988_03600 PF00528 Binding-protein-dependent transport system inner membrane component N7988_03605 PF00873 AcrB/AcrD/AcrF family N7988_03725 PF00571 CBS domain N7988_03740 PF08239 Bacterial SH3 domain N7988_03740 PF00246 Zinc carboxypeptidase N7988_03745 PF03070 TENA/THI-4/PQQC family N7988_03750 PF00005 ABC transporter N7988_03755 PF00528 Binding-protein-dependent transport system inner membrane component N7988_03760 PF09084 NMT1/THI5 like N7988_03765 PF02581 Thiamine monophosphate synthase N7988_03770 PF01266 FAD dependent oxidoreductase N7988_03775 PF02597 ThiS family N7988_03780 PF05690 Thiazole biosynthesis protein ThiG N7988_03785 PF00899 ThiF family N7988_03790 PF08543 Phosphomethylpyrimidine kinase N7988_03815 PF03814 Potassium-transporting ATPase A subunit N7988_03825 PF02669 K+-transporting ATPase, c chain N7988_03830 PF02702 Osmosensitive K+ channel His kinase sensor domain N7988_03835 PF07690 Major Facilitator Superfamily N7988_03840 PF01047 MarR family N7988_03865 PF00005 ABC transporter N7988_03875 PF00860 Permease family N7988_03885 PF17969 L,D-transpeptidase C-terminal domain N7988_03885 PF03734 L,D-transpeptidase catalytic domain N7988_03900 PF00085 Thioredoxin N7988_03905 PF02600 Disulfide bond formation protein DsbB N7988_03910 PF14148 YhdB-like protein N7988_03920 PF03845 Spore germination protein N7988_03930 PF03323 Bacillus/Clostridium GerA spore germination protein N7988_03940 PF00881 Nitroreductase family N7988_03945 PF04293 SpoVR like protein N7988_03960 PF07992 Pyridine nucleotide-disulphide oxidoreductase N7988_03960 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain N7988_03965 PF02583 Metal-sensitive transcriptional repressor N7988_03970 PF00581 Rhodanese-like domain N7988_03970 PF01206 Sulfurtransferase TusA N7988_03975 PF00581 Rhodanese-like domain N7988_03975 PF00753 Metallo-beta-lactamase superfamily N7988_03980 PF01206 Sulfurtransferase TusA N7988_03985 PF00581 Rhodanese-like domain N7988_03985 PF01206 Sulfurtransferase TusA N7988_03995 PF13686 DsrE/DsrF/DrsH-like family N7988_04000 PF01925 Sulfite exporter TauE/SafE N7988_04010 PF03816 Cell envelope-related transcriptional attenuator domain N7988_04015 PF08240 Alcohol dehydrogenase GroES-like domain N7988_04015 PF00107 Zinc-binding dehydrogenase N7988_04020 PF02690 Na+/Pi-cotransporter N7988_04025 PF07690 Major Facilitator Superfamily N7988_04035 PF08279 HTH domain N7988_04035 PF05043 Mga helix-turn-helix domain N7988_04035 PF00874 PRD domain N7988_04035 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 N7988_04040 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit N7988_04045 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit N7988_04050 PF02378 Phosphotransferase system, EIIC N7988_04070 PF06725 3D domain N7988_04070 PF01476 LysM domain N7988_04075 PF02687 FtsX-like permease family N7988_04075 PF12704 MacB-like periplasmic core domain N7988_04080 PF00005 ABC transporter N7988_04090 PF09529 Integral membrane protein (intg_mem_TP0381) N7988_04105 PF05525 Branched-chain amino acid transport protein N7988_04110 PF05067 Manganese containing catalase N7988_04115 PF12652 CotJB protein N7988_04120 PF11007 Spore coat associated protein JA (CotJA) N7988_04135 PF02735 Ku70/Ku80 beta-barrel domain N7988_04145 PF09335 SNARE associated Golgi protein N7988_04180 PF13520 Amino acid permease N7988_04185 PF00999 Sodium/hydrogen exchanger family N7988_04195 PF01418 Helix-turn-helix domain, rpiR family N7988_04195 PF01380 SIS domain N7988_04200 PF13580 SIS domain N7988_04205 PF02378 Phosphotransferase system, EIIC N7988_04205 PF00367 phosphotransferase system, EIIB N7988_04215 PF07681 DoxX N7988_04230 PF00892 EamA-like transporter family N7988_04235 PF01037 Lrp/AsnC ligand binding domain N7988_04240 PF14698 Argininosuccinate lyase C-terminal N7988_04240 PF00583 Acetyltransferase (GNAT) family N7988_04240 PF00206 Lyase N7988_04245 PF00106 short chain dehydrogenase N7988_04250 PF13411 MerR HTH family regulatory protein N7988_04255 PF00893 Small Multidrug Resistance protein N7988_04265 PF00440 Bacterial regulatory proteins, tetR family N7988_04265 PF17934 Tetracyclin repressor-like, C-terminal domain N7988_04270 PF07690 Major Facilitator Superfamily N7988_04285 PF00072 Response regulator receiver domain N7988_04285 PF00486 Transcriptional regulatory protein, C terminal N7988_04290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N7988_04290 PF00512 His Kinase A (phospho-acceptor) domain N7988_04300 PF00005 ABC transporter N7988_04305 PF02687 FtsX-like permease family N7988_04305 PF12704 MacB-like periplasmic core domain N7988_04310 PF00005 ABC transporter N7988_04315 PF02687 FtsX-like permease family N7988_04330 PF01638 HxlR-like helix-turn-helix N7988_04340 PF02525 Flavodoxin-like fold N7988_04345 PF12793 Sugar transport-related sRNA regulator N-term N7988_04345 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle N7988_04350 PF07690 Major Facilitator Superfamily N7988_04365 PF01965 DJ-1/PfpI family N7988_04370 PF00199 Catalase N7988_04370 PF06628 Catalase-related immune-responsive N7988_04370 PF18011 C-terminal domain found in long catalases N7988_04380 PF13520 Amino acid permease N7988_04395 PF00171 Aldehyde dehydrogenase family N7988_04400 PF00664 ABC transporter transmembrane region N7988_04400 PF00005 ABC transporter N7988_04405 PF00664 ABC transporter transmembrane region N7988_04405 PF00005 ABC transporter N7988_04410 PF00497 Bacterial extracellular solute-binding proteins, family 3 N7988_04415 PF00528 Binding-protein-dependent transport system inner membrane component N7988_04420 PF00005 ABC transporter N7988_04425 PF00269 Small, acid-soluble spore proteins, alpha/beta type N7988_04435 PF14398 YheC/D like ATP-grasp N7988_04445 PF04286 Protein of unknown function (DUF445) N7988_04450 PF06133 Control of competence regulator ComK, YlbF/YmcA N7988_04465 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain N7988_04465 PF00205 Thiamine pyrophosphate enzyme, central domain N7988_04465 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain N7988_04470 PF03306 Alpha-acetolactate decarboxylase N7988_04475 PF02245 Methylpurine-DNA glycosylase (MPG) N7988_04490 PF01510 N-acetylmuramoyl-L-alanine amidase N7988_04490 PF01471 Putative peptidoglycan binding domain N7988_04495 PF04055 Radical SAM superfamily N7988_04500 PF00501 AMP-binding enzyme N7988_04500 PF13193 AMP-binding enzyme C-terminal domain N7988_04515 PF01740 STAS domain N7988_04515 PF00916 Sulfate permease family N7988_04520 PF14667 Polysaccharide biosynthesis C-terminal domain N7988_04520 PF01943 Polysaccharide biosynthesis protein N7988_04540 PF00378 Enoyl-CoA hydratase/isomerase N7988_04560 PF05343 M42 glutamyl aminopeptidase N7988_04565 PF01520 N-acetylmuramoyl-L-alanine amidase N7988_04565 PF00395 S-layer homology domain N7988_04575 PF11121 Protein of unknown function (DUF2639) N7988_04580 PF05544 Proline racemase N7988_04585 PF02423 Ornithine cyclodeaminase/mu-crystallin family N7988_04595 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle N7988_04600 PF00528 Binding-protein-dependent transport system inner membrane component N7988_04605 PF00528 Binding-protein-dependent transport system inner membrane component N7988_04605 PF12911 N-terminal TM domain of oligopeptide transport permease C N7988_04610 PF08352 Oligopeptide/dipeptide transporter, C-terminal region N7988_04610 PF00005 ABC transporter N7988_04615 PF00005 ABC transporter N7988_04615 PF08352 Oligopeptide/dipeptide transporter, C-terminal region N7988_04640 PF16123 Hydroxyacylglutathione hydrolase C-terminus N7988_04640 PF00753 Metallo-beta-lactamase superfamily N7988_04675 PF00083 Sugar (and other) transporter N7988_04680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N7988_04680 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain N7988_04685 PF12431 Transcriptional regulator N7988_04685 PF08279 HTH domain N7988_04685 PF00072 Response regulator receiver domain N7988_04690 PF03401 Tripartite tricarboxylate transporter family receptor N7988_04715 PF05872 Bacterial protein of unknown function (DUF853) N7988_04725 PF13476 AAA domain N7988_04735 PF00266 Aminotransferase class-V N7988_04770 PF13411 MerR HTH family regulatory protein N7988_04770 PF06445 GyrI-like small molecule binding domain N7988_04785 PF00772 DnaB-like helicase N terminal domain N7988_04785 PF03796 DnaB-like helicase C terminal domain N7988_04795 PF01925 Sulfite exporter TauE/SafE N7988_04805 PF00158 Sigma-54 interaction domain N7988_04805 PF02954 Bacterial regulatory protein, Fis family N7988_04805 PF13426 PAS domain N7988_04810 PF07722 Peptidase C26 N7988_04815 PF03606 C4-dicarboxylate anaerobic carrier N7988_04825 PF04012 PspA/IM30 family N7988_04835 PF07690 Major Facilitator Superfamily N7988_04855 PF09680 Family of unknown function N7988_04860 PF13302 Acetyltransferase (GNAT) domain N7988_04945 PF13026 Protein of unknown function (DUF3887) N7988_04945 PF12146 Serine aminopeptidase, S33 N7988_04955 PF01381 Helix-turn-helix N7988_04970 PF00109 Beta-ketoacyl synthase, N-terminal domain N7988_04970 PF02801 Beta-ketoacyl synthase, C-terminal domain N7988_04980 PF01609 Transposase DDE domain N7988_05030 PF01066 CDP-alcohol phosphatidyltransferase N7988_05045 PF07690 Major Facilitator Superfamily N7988_05075 PF01810 LysE type translocator N7988_05085 PF02733 Dak1 domain N7988_05095 PF02733 Dak1 domain N7988_05120 PF00395 S-layer homology domain N7988_05155 PF11181 Heat induced stress protein YflT N7988_05175 PF01740 STAS domain N7988_05180 PF13581 Histidine kinase-like ATPase domain N7988_05185 PF04542 Sigma-70 region 2 N7988_05185 PF04539 Sigma-70 region 3 N7988_05185 PF04545 Sigma-70, region 4 N7988_05195 PF13426 PAS domain N7988_05195 PF07228 Stage II sporulation protein E (SpoIIE) N7988_05200 PF01739 CheR methyltransferase, SAM binding domain N7988_05200 PF03705 CheR methyltransferase, all-alpha domain N7988_05205 PF00512 His Kinase A (phospho-acceptor) domain N7988_05205 PF01627 Hpt domain N7988_05205 PF00072 Response regulator receiver domain N7988_05205 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) N7988_05205 PF00672 HAMP domain N7988_05205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N7988_05230 PF12323 Helix-turn-helix domain N7988_05230 PF01385 Probable transposase N7988_05230 PF07282 Putative transposase DNA-binding domain N7988_05240 PF01906 Putative heavy-metal-binding N7988_05250 PF00107 Zinc-binding dehydrogenase N7988_05250 PF08240 Alcohol dehydrogenase GroES-like domain N7988_05255 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family N7988_05260 PF11121 Protein of unknown function (DUF2639) N7988_05275 PF00149 Calcineurin-like phosphoesterase N7988_05280 PF13514 AAA domain N7988_05285 PF01966 HD domain N7988_05285 PF01336 OB-fold nucleic acid binding domain N7988_05295 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily N7988_05300 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily N7988_05305 PF18801 response regulator aspartate phosphatase H, N terminal N7988_05305 PF17874 MalT-like TPR region N7988_05315 PF08386 TAP-like protein N7988_05315 PF00561 alpha/beta hydrolase fold N7988_05320 PF14147 Sporulation protein YhaL N7988_05335 PF00190 Cupin N7988_05345 PF01381 Helix-turn-helix N7988_05350 PF04309 Glycerol-3-phosphate responsive antiterminator N7988_05355 PF00230 Major intrinsic protein N7988_05360 PF02782 FGGY family of carbohydrate kinases, C-terminal domain N7988_05360 PF00370 FGGY family of carbohydrate kinases, N-terminal domain N7988_05365 PF01266 FAD dependent oxidoreductase N7988_05365 PF16901 C-terminal domain of alpha-glycerophosphate oxidase N7988_05370 PF03551 Transcriptional regulator PadR-like family N7988_05380 PF08281 Sigma-70, region 4 N7988_05380 PF04542 Sigma-70 region 2 N7988_05395 PF13538 UvrD-like helicase C-terminal domain N7988_05415 PF01047 MarR family N7988_05420 PF12732 YtxH-like protein N7988_05425 PF01230 HIT domain N7988_05430 PF00005 ABC transporter N7988_05435 PF05975 Bacterial ABC transporter protein EcsB N7988_05440 PF12787 EcsC protein family N7988_05450 PF17934 Tetracyclin repressor-like, C-terminal domain N7988_05450 PF00440 Bacterial regulatory proteins, tetR family N7988_05460 PF03703 Bacterial PH domain N7988_05465 PF03703 Bacterial PH domain N7988_05490 PF10014 2OG-Fe dioxygenase N7988_05500 PF00892 EamA-like transporter family N7988_05505 PF03703 Bacterial PH domain N7988_05510 PF03703 Bacterial PH domain N7988_05515 PF03992 Antibiotic biosynthesis monooxygenase N7988_05520 PF00905 Penicillin binding protein transpeptidase domain N7988_05520 PF00912 Transglycosylase N7988_05525 PF01208 Uroporphyrinogen decarboxylase (URO-D) N7988_05530 PF00762 Ferrochelatase N7988_05535 PF01593 Flavin containing amine oxidoreductase N7988_05560 PF03965 Penicillinase repressor N7988_05570 PF00440 Bacterial regulatory proteins, tetR family N7988_05570 PF17932 Tetracyclin repressor-like, C-terminal domain N7988_05600 PF00356 Bacterial regulatory proteins, lacI family N7988_05605 PF14149 YhfH-like protein N7988_05610 PF12706 Beta-lactamase superfamily domain N7988_05615 PF10437 Bacterial lipoate protein ligase C-terminus N7988_05615 PF03099 Biotin/lipoate A/B protein ligase family N7988_05625 PF13193 AMP-binding enzyme C-terminal domain N7988_05625 PF00501 AMP-binding enzyme N7988_05630 PF01520 N-acetylmuramoyl-L-alanine amidase N7988_05630 PF00395 S-layer homology domain N7988_05640 PF00528 Binding-protein-dependent transport system inner membrane component N7988_05645 PF00528 Binding-protein-dependent transport system inner membrane component N7988_05650 PF12857 TOBE-like domain N7988_05650 PF00005 ABC transporter N7988_05650 PF17850 CysA C-terminal regulatory domain N7988_05655 PF07968 Leukocidin/Hemolysin toxin family N7988_05660 PF00149 Calcineurin-like phosphoesterase N7988_05665 PF01966 HD domain N7988_05675 PF04542 Sigma-70 region 2 N7988_05675 PF08281 Sigma-70, region 4 N7988_05680 PF12833 Helix-turn-helix domain N7988_05680 PF06445 GyrI-like small molecule binding domain N7988_05690 PF00512 His Kinase A (phospho-acceptor) domain N7988_05690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N7988_05695 PF00072 Response regulator receiver domain N7988_05695 PF00486 Transcriptional regulatory protein, C terminal N7988_05715 PF01435 Peptidase family M48 N7988_05715 PF16491 CAAX prenyl protease N-terminal, five membrane helices N7988_05720 PF00672 HAMP domain N7988_05720 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N7988_05720 PF02743 Cache domain N7988_05725 PF00331 Glycosyl hydrolase family 10 N7988_05725 PF02018 Carbohydrate binding domain N7988_05725 PF06452 Carbohydrate family 9 binding domain-like N7988_05725 PF00395 S-layer homology domain N7988_05735 PF01274 Malate synthase N7988_05740 PF00463 Isocitrate lyase family N7988_05755 PF00313 'Cold-shock' DNA-binding domain N7988_05775 PF09335 SNARE associated Golgi protein N7988_05780 PF10502 Signal peptidase, peptidase S26 N7988_05785 PF12705 PD-(D/E)XK nuclease superfamily N7988_05785 PF13361 UvrD-like helicase C-terminal domain N7988_05790 PF13361 UvrD-like helicase C-terminal domain N7988_05790 PF12705 PD-(D/E)XK nuclease superfamily N7988_05790 PF00580 UvrD/REP helicase N-terminal domain N7988_05800 PF10676 Spore germination protein gerPA/gerPF N7988_05805 PF10970 Spore germination protein GerPE N7988_05815 PF10737 Spore germination protein GerPC N7988_05820 PF10803 Spore germination GerPB N7988_05825 PF10676 Spore germination protein gerPA/gerPF N7988_05830 PF09388 Spo0E like sporulation regulatory protein N7988_05835 PF01557 Fumarylacetoacetate (FAA) hydrolase family N7988_05845 PF00202 Aminotransferase class-III N7988_05850 PF07457 Protein of unknown function (DUF1516) N7988_05860 PF00733 Asparagine synthase N7988_05860 PF13537 Glutamine amidotransferase domain N7988_05865 PF00762 Ferrochelatase N7988_05870 PF00199 Catalase N7988_05870 PF06628 Catalase-related immune-responsive N7988_05880 PF00689 Cation transporting ATPase, C-terminus N7988_05880 PF00690 Cation transporter/ATPase, N-terminus N7988_05905 PF06803 Protein of unknown function (DUF1232) N7988_05910 PF00909 Ammonium Transporter Family N7988_05915 PF00128 Alpha amylase, catalytic domain N7988_05925 PF04461 Protein of unknown function (DUF520) N7988_05930 PF13509 S1 domain N7988_05930 PF17783 CvfB-like winged helix domain N7988_05945 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 N7988_05945 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) N7988_05950 PF12758 Protein of unknown function (DUF3813) N7988_05965 PF14168 YjzC-like protein N7988_05970 PF07724 AAA domain (Cdc48 subfamily) N7988_05970 PF17871 AAA lid domain N7988_05970 PF02861 Clp amino terminal domain, pathogenicity island component N7988_05970 PF10431 C-terminal, D2-small domain, of ClpB protein N7988_05970 PF00004 ATPase family associated with various cellular activities (AAA) N7988_05990 PF10815 ComZ N7988_05995 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III N7988_05995 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal N7988_06000 PF02801 Beta-ketoacyl synthase, C-terminal domain N7988_06000 PF00109 Beta-ketoacyl synthase, N-terminal domain N7988_06005 PF10026 Predicted Zn-dependent protease (DUF2268) N7988_06010 PF12227 Protein of unknown function (DUF3603) N7988_06015 PF00579 tRNA synthetases class I (W and Y) N7988_06025 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle N7988_06030 PF00528 Binding-protein-dependent transport system inner membrane component N7988_06035 PF12911 N-terminal TM domain of oligopeptide transport permease C N7988_06035 PF00528 Binding-protein-dependent transport system inner membrane component N7988_06040 PF08352 Oligopeptide/dipeptide transporter, C-terminal region N7988_06040 PF00005 ABC transporter N7988_06045 PF00005 ABC transporter N7988_06045 PF08352 Oligopeptide/dipeptide transporter, C-terminal region N7988_06050 PF01554 MatE N7988_06055 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle N7988_06065 PF03960 ArsC family N7988_06070 PF03741 Integral membrane protein TerC family N7988_06075 PF05389 Negative regulator of genetic competence (MecA) N7988_06080 PF13091 PLD-like domain N7988_06080 PF13396 Phospholipase_D-nuclease N-terminal N7988_06090 PF01432 Peptidase family M3 N7988_06090 PF08439 Oligopeptidase F N7988_06105 PF01152 Bacterial-like globin N7988_06110 PF01928 CYTH domain N7988_06120 PF04607 Region found in RelA / SpoT proteins N7988_06125 PF01513 ATP-NAD kinase N7988_06130 PF00849 RNA pseudouridylate synthase N7988_06140 PF00149 Calcineurin-like phosphoesterase N7988_06145 PF01098 Cell cycle protein N7988_06150 PF00535 Glycosyl transferase family 2 N7988_06155 PF08241 Methyltransferase domain N7988_06160 PF05711 Macrocin-O-methyltransferase (TylF) N7988_06170 PF00535 Glycosyl transferase family 2 N7988_06170 PF13181 Tetratricopeptide repeat N7988_06190 PF00483 Nucleotidyl transferase N7988_06195 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase N7988_06200 PF16363 GDP-mannose 4,6 dehydratase N7988_06205 PF04321 RmlD substrate binding domain N7988_06225 PF07098 Protein of unknown function (DUF1360) N7988_06245 PF00580 UvrD/REP helicase N-terminal domain N7988_06245 PF13361 UvrD-like helicase C-terminal domain N7988_06250 PF13673 Acetyltransferase (GNAT) domain N7988_06260 PF00756 Putative esterase N7988_06280 PF02368 Bacterial Ig-like domain (group 2) N7988_06285 PF00474 Sodium:solute symporter family N7988_06290 PF04715 Anthranilate synthase component I, N terminal region N7988_06290 PF00425 chorismate binding enzyme N7988_06295 PF00591 Glycosyl transferase family, a/b domain N7988_06295 PF02885 Glycosyl transferase family, helical bundle domain N7988_06295 PF00117 Glutamine amidotransferase class-I N7988_06300 PF02885 Glycosyl transferase family, helical bundle domain N7988_06300 PF00591 Glycosyl transferase family, a/b domain N7988_06305 PF00218 Indole-3-glycerol phosphate synthase N7988_06310 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase N7988_06315 PF00291 Pyridoxal-phosphate dependent enzyme N7988_06320 PF00290 Tryptophan synthase alpha chain N7988_06340 PF02652 L-lactate permease N7988_06345 PF10042 Uncharacterized conserved protein (DUF2278) N7988_06370 PF07992 Pyridine nucleotide-disulphide oxidoreductase N7988_06370 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain N7988_06385 PF08241 Methyltransferase domain N7988_06390 PF00881 Nitroreductase family N7988_06405 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) N7988_06405 PF00364 Biotin-requiring enzyme N7988_06405 PF02817 e3 binding domain N7988_06410 PF00676 Dehydrogenase E1 component N7988_06410 PF02779 Transketolase, pyrimidine binding domain N7988_06410 PF16870 2-oxoglutarate dehydrogenase C-terminal N7988_06415 PF01381 Helix-turn-helix N7988_06450 PF00005 ABC transporter N7988_06450 PF13732 Domain of unknown function (DUF4162) N7988_06480 PF07943 Penicillin-binding protein 5, C-terminal domain N7988_06480 PF00768 D-alanyl-D-alanine carboxypeptidase N7988_06490 PF12389 Camelysin metallo-endopeptidase N7988_06500 PF12389 Camelysin metallo-endopeptidase N7988_06505 PF01381 Helix-turn-helix N7988_06505 PF08671 Anti-repressor SinI N7988_06515 PF05547 Immune inhibitor A peptidase M6 N7988_06520 PF00171 Aldehyde dehydrogenase family N7988_06525 PF08402 TOBE domain N7988_06525 PF00005 ABC transporter N7988_06530 PF00528 Binding-protein-dependent transport system inner membrane component N7988_06535 PF00528 Binding-protein-dependent transport system inner membrane component N7988_06540 PF13416 Bacterial extracellular solute-binding protein N7988_06545 PF01569 PAP2 superfamily N7988_06550 PF03176 MMPL family N7988_06560 PF01479 S4 domain N7988_06560 PF00849 RNA pseudouridylate synthase N7988_06570 PF00188 Cysteine-rich secretory protein family N7988_06575 PF02754 Cysteine-rich domain N7988_06575 PF13183 4Fe-4S dicluster domain N7988_06580 PF01565 FAD binding domain N7988_06580 PF02913 FAD linked oxidases, C-terminal domain N7988_06585 PF17853 GGDEF-like domain N7988_06585 PF13556 PucR C-terminal helix-turn-helix domain N7988_06585 PF05651 Putative sugar diacid recognition N7988_06595 PF00072 Response regulator receiver domain N7988_06595 PF00486 Transcriptional regulatory protein, C terminal N7988_06600 PF00989 PAS fold N7988_06600 PF00512 His Kinase A (phospho-acceptor) domain N7988_06600 PF18698 Histidine kinase sensor domain N7988_06600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N7988_06600 PF00672 HAMP domain N7988_06605 PF00392 Bacterial regulatory proteins, gntR family N7988_06605 PF07729 FCD domain N7988_06610 PF02754 Cysteine-rich domain N7988_06615 PF02589 LUD domain N7988_06615 PF13183 4Fe-4S dicluster domain N7988_06615 PF11870 Domain of unknown function (DUF3390) N7988_06620 PF02589 LUD domain N7988_06625 PF01478 Type IV leader peptidase family N7988_06625 PF06750 Bacterial Peptidase A24 N-terminal domain N7988_06635 PF01226 Formate/nitrite transporter N7988_06640 PF03741 Integral membrane protein TerC family N7988_06645 PF02386 Cation transport protein N7988_06650 PF00269 Small, acid-soluble spore proteins, alpha/beta type N7988_06655 PF01575 MaoC like domain N7988_06680 PF00561 alpha/beta hydrolase fold N7988_06690 PF02386 Cation transport protein N7988_06710 PF08402 TOBE domain N7988_06710 PF00005 ABC transporter N7988_06715 PF00528 Binding-protein-dependent transport system inner membrane component N7988_06720 PF13419 Haloacid dehalogenase-like hydrolase N7988_06725 PF00266 Aminotransferase class-V N7988_06735 PF00455 DeoR C terminal sensor domain N7988_06735 PF08220 DeoR-like helix-turn-helix domain N7988_06745 PF00596 Class II Aldolase and Adducin N-terminal domain N7988_06755 PF04748 Divergent polysaccharide deacetylase N7988_06760 PF09388 Spo0E like sporulation regulatory protein N7988_06765 PF02743 Cache domain N7988_06765 PF00512 His Kinase A (phospho-acceptor) domain N7988_06765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N7988_06770 PF01047 MarR family N7988_06780 PF12867 DinB superfamily N7988_06790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N7988_06790 PF00512 His Kinase A (phospho-acceptor) domain N7988_06790 PF00989 PAS fold N7988_06790 PF13188 PAS domain N7988_06790 PF13426 PAS domain N7988_06795 PF06508 Queuosine biosynthesis protein QueC N7988_06800 PF01242 6-pyruvoyl tetrahydropterin synthase N7988_06805 PF04055 Radical SAM superfamily N7988_06810 PF14489 QueF-like protein N7988_06815 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) N7988_06845 PF07972 NrdI Flavodoxin like N7988_06850 PF08343 Ribonucleotide reductase N-terminal N7988_06850 PF00317 Ribonucleotide reductase, all-alpha domain N7988_06850 PF02867 Ribonucleotide reductase, barrel domain N7988_06865 PF00392 Bacterial regulatory proteins, gntR family N7988_06870 PF00005 ABC transporter N7988_06880 PF00005 ABC transporter N7988_06900 PF01037 Lrp/AsnC ligand binding domain N7988_06910 PF00857 Isochorismatase family N7988_06920 PF02016 LD-carboxypeptidase N-terminal domain N7988_06920 PF17676 LD-carboxypeptidase C-terminal domain N7988_06925 PF03060 Nitronate monooxygenase N7988_06930 PF04914 DltD protein N7988_06935 PF00550 Phosphopantetheine attachment site N7988_06940 PF03062 MBOAT, membrane-bound O-acyltransferase family N7988_06945 PF13193 AMP-binding enzyme C-terminal domain N7988_06945 PF00501 AMP-binding enzyme N7988_06955 PF07687 Peptidase dimerisation domain N7988_06955 PF01546 Peptidase family M20/M25/M40 N7988_06965 PF00258 Flavodoxin N7988_07000 PF01554 MatE N7988_07005 PF02673 Bacitracin resistance protein BacA N7988_07020 PF01047 MarR family N7988_07030 PF00375 Sodium:dicarboxylate symporter family N7988_07035 PF02386 Cation transport protein N7988_07045 PF09579 Sporulation protein YtfJ (Spore_YtfJ) N7988_07055 PF03698 Uncharacterised protein family (UPF0180) N7988_07065 PF01063 Amino-transferase class IV N7988_07070 PF00205 Thiamine pyrophosphate enzyme, central domain N7988_07070 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain N7988_07070 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain N7988_07075 PF10369 Small subunit of acetolactate synthase N7988_07075 PF01842 ACT domain N7988_07080 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain N7988_07080 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain N7988_07085 PF08502 LeuA allosteric (dimerisation) domain N7988_07085 PF00682 HMGL-like N7988_07090 PF00180 Isocitrate/isopropylmalate dehydrogenase N7988_07095 PF00330 Aconitase family (aconitate hydratase) N7988_07100 PF00694 Aconitase C-terminal domain N7988_07105 PF13393 Histidyl-tRNA synthetase N7988_07110 PF01634 ATP phosphoribosyltransferase N7988_07115 PF00815 Histidinol dehydrogenase N7988_07120 PF00475 Imidazoleglycerol-phosphate dehydratase N7988_07125 PF00117 Glutamine amidotransferase class-I N7988_07130 PF00977 Histidine biosynthesis protein N7988_07135 PF00977 Histidine biosynthesis protein N7988_07140 PF01502 Phosphoribosyl-AMP cyclohydrolase N7988_07145 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase N7988_07150 PF02811 PHP domain N7988_07160 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain N7988_07160 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain N7988_07165 PF01066 CDP-alcohol phosphatidyltransferase N7988_07170 PF00884 Sulfatase N7988_07180 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain N7988_07180 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain N7988_07190 PF01507 Phosphoadenosine phosphosulfate reductase family N7988_07195 PF01747 ATP-sulfurylase N7988_07195 PF14306 PUA-like domain N7988_07205 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain N7988_07205 PF01077 Nitrite and sulphite reductase 4Fe-4S domain N7988_07215 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases N7988_07220 PF01903 CbiX N7988_07230 PF00209 Sodium:neurotransmitter symporter family N7988_07245 PF00375 Sodium:dicarboxylate symporter family N7988_07255 PF03553 Na+/H+ antiporter family N7988_07270 PF09922 Cell wall-active antibiotics response 4TMS YvqF N7988_07275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N7988_07275 PF07730 Histidine kinase N7988_07275 PF00672 HAMP domain N7988_07280 PF00196 Bacterial regulatory proteins, luxR family N7988_07280 PF00072 Response regulator receiver domain N7988_07290 PF05525 Branched-chain amino acid transport protein N7988_07300 PF01209 ubiE/COQ5 methyltransferase family N7988_07325 PF00042 Globin N7988_07325 PF00970 Oxidoreductase FAD-binding domain N7988_07325 PF00175 Oxidoreductase NAD-binding domain N7988_07340 PF01925 Sulfite exporter TauE/SafE N7988_07345 PF01384 Phosphate transporter family N7988_07350 PF01865 Protein of unknown function DUF47 N7988_07355 PF00912 Transglycosylase N7988_07355 PF00905 Penicillin binding protein transpeptidase domain N7988_07370 PF00989 PAS fold N7988_07370 PF00512 His Kinase A (phospho-acceptor) domain N7988_07370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N7988_07375 PF01904 Protein of unknown function DUF72 N7988_07385 PF00589 Phage integrase family N7988_07390 PF00512 His Kinase A (phospho-acceptor) domain N7988_07390 PF16736 Single Cache-like N7988_07390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N7988_07390 PF00989 PAS fold N7988_07395 PF01048 Phosphorylase superfamily N7988_07405 PF03706 Lysylphosphatidylglycerol synthase TM region N7988_07405 PF09924 Uncharacterised conserved protein (DUF2156) N7988_07420 PF02777 Iron/manganese superoxide dismutases, C-terminal domain N7988_07420 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain N7988_07425 PF07943 Penicillin-binding protein 5, C-terminal domain N7988_07425 PF00768 D-alanyl-D-alanine carboxypeptidase N7988_07430 PF07670 Nucleoside recognition N7988_07435 PF07670 Nucleoside recognition N7988_07440 PF00849 RNA pseudouridylate synthase N7988_07440 PF01479 S4 domain N7988_07445 PF00578 AhpC/TSA family N7988_07450 PF05140 ResB-like family N7988_07455 PF01578 Cytochrome C assembly protein N7988_07460 PF00486 Transcriptional regulatory protein, C terminal N7988_07460 PF00072 Response regulator receiver domain N7988_07465 PF00989 PAS fold N7988_07465 PF18698 Histidine kinase sensor domain N7988_07465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N7988_07465 PF00672 HAMP domain N7988_07465 PF00512 His Kinase A (phospho-acceptor) domain N7988_07470 PF01923 Cobalamin adenosyltransferase N7988_07485 PF12822 ECF transporter, substrate-specific component N7988_07500 PF00271 Helicase conserved C-terminal domain N7988_07500 PF00270 DEAD/DEAH box helicase N7988_07505 PF02517 CPBP intramembrane metalloprotease N7988_07515 PF00149 Calcineurin-like phosphoesterase N7988_07520 PF13411 MerR HTH family regulatory protein N7988_07525 PF05389 Negative regulator of genetic competence (MecA) N7988_07530 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain N7988_07530 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase N7988_07555 PF17763 Glutaminase/Asparaginase C-terminal domain N7988_07555 PF00710 Asparaginase, N-terminal N7988_07565 PF02224 Cytidylate kinase N7988_07570 PF00575 S1 RNA binding domain N7988_07575 PF01070 FMN-dependent dehydrogenase N7988_07580 PF14140 YpzI-like protein N7988_07590 PF14045 YIEGIA protein N7988_07600 PF01926 50S ribosome-binding GTPase N7988_07600 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal N7988_07605 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus N7988_07605 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus N7988_07615 PF10966 Protein of unknown function (DUF2768) N7988_07625 PF09547 Stage IV sporulation protein A (spore_IV_A) N7988_07630 PF00216 Bacterial DNA-binding protein N7988_07635 PF01227 GTP cyclohydrolase I N7988_07640 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 N7988_07645 PF01209 ubiE/COQ5 methyltransferase family N7988_07650 PF00348 Polyprenyl synthetase N7988_07655 PF00334 Nucleoside diphosphate kinase N7988_07660 PF01264 Chorismate synthase N7988_07665 PF01761 3-dehydroquinate synthase N7988_07670 PF00155 Aminotransferase class I and II N7988_07680 PF08864 UPF0302 domain N7988_07680 PF08858 IDEAL domain N7988_07685 PF10673 Protein of unknown function (DUF2487) N7988_07690 PF00355 Rieske [2Fe-2S] domain N7988_07695 PF00033 Cytochrome b/b6/petB N7988_07700 PF00032 Cytochrome b(C-terminal)/b6/petD N7988_07700 PF13442 Cytochrome C oxidase, cbb3-type, subunit III N7988_07705 PF07187 Protein of unknown function (DUF1405) N7988_07715 PF09577 Sporulation protein YpjB (SpoYpjB) N7988_07720 PF04298 Putative neutral zinc metallopeptidase N7988_07730 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 N7988_07730 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) N7988_07735 PF03819 MazG nucleotide pyrophosphohydrolase domain N7988_07740 PF05173 Dihydrodipicolinate reductase, C-terminus N7988_07740 PF01113 Dihydrodipicolinate reductase, N-terminus N7988_07745 PF02142 MGS-like domain N7988_07750 PF02585 GlcNAc-PI de-N-acetylase N7988_07755 PF13439 Glycosyltransferase Family 4 N7988_07755 PF00534 Glycosyl transferases group 1 N7988_07760 PF01743 Poly A polymerase head domain N7988_07760 PF12627 Probable RNA and SrmB- binding site of polymerase A N7988_07760 PF13735 tRNA nucleotidyltransferase domain 2 putative N7988_07765 PF02237 Biotin protein ligase C terminal domain N7988_07765 PF03099 Biotin/lipoate A/B protein ligase family N7988_07765 PF08279 HTH domain N7988_07775 PF02548 Ketopantoate hydroxymethyltransferase N7988_07780 PF02569 Pantoate-beta-alanine ligase N7988_07785 PF02261 Aspartate decarboxylase N7988_07790 PF00929 Exonuclease N7988_07790 PF04851 Type III restriction enzyme, res subunit N7988_07790 PF13307 Helicase C-terminal domain N7988_07795 PF14084 Protein of unknown function (DUF4264) N7988_07805 PF00155 Aminotransferase class I and II N7988_07810 PF07261 Replication initiation and membrane attachment N7988_07815 PF00730 HhH-GPD superfamily base excision DNA repair protein N7988_07815 PF00633 Helix-hairpin-helix motif N7988_07815 PF10576 Iron-sulfur binding domain of endonuclease III N7988_07825 PF00912 Transglycosylase N7988_07825 PF00905 Penicillin binding protein transpeptidase domain N7988_07830 PF03838 Recombination protein U N7988_07835 PF10720 Protein of unknown function (DUF2515) N7988_07865 PF06908 YspA SLOG family N7988_07870 PF05103 DivIVA protein N7988_07880 PF02926 THUMP domain N7988_07880 PF01170 Putative RNA methylase family UPF0020 N7988_07890 PF13307 Helicase C-terminal domain N7988_07895 PF02074 Carboxypeptidase Taq (M32) metallopeptidase N7988_07905 PF00557 Metallopeptidase family M24 N7988_07910 PF00156 Phosphoribosyl transferase domain N7988_07915 PF00860 Permease family N7988_07920 PF04235 Protein of unknown function (DUF418) N7988_07925 PF00350 Dynamin family N7988_07935 PF00583 Acetyltransferase (GNAT) family N7988_07940 PF10752 Protein of unknown function (DUF2533) N7988_07945 PF00581 Rhodanese-like domain N7988_07980 PF00690 Cation transporter/ATPase, N-terminus N7988_07980 PF00689 Cation transporting ATPase, C-terminus N7988_07985 PF01367 5'-3' exonuclease, C-terminal SAM fold N7988_07985 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain N7988_08000 PF13807 G-rich domain on putative tyrosine kinase N7988_08000 PF02706 Chain length determinant protein N7988_08010 PF02397 Bacterial sugar transferase N7988_08025 PF00535 Glycosyl transferase family 2 N7988_08030 PF13439 Glycosyltransferase Family 4 N7988_08030 PF00534 Glycosyl transferases group 1 N7988_08045 PF13673 Acetyltransferase (GNAT) domain N7988_08045 PF18014 Acetyltransferase (GNAT) domain N7988_08065 PF13456 Reverse transcriptase-like N7988_08070 PF01263 Aldose 1-epimerase N7988_08095 PF00313 'Cold-shock' DNA-binding domain N7988_08100 PF08892 YqcI/YcgG family N7988_08105 PF01810 LysE type translocator N7988_08125 PF00474 Sodium:solute symporter family N7988_08130 PF00202 Aminotransferase class-III N7988_08140 PF00999 Sodium/hydrogen exchanger family N7988_08145 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain N7988_08145 PF00753 Metallo-beta-lactamase superfamily N7988_08145 PF17770 Ribonuclease J C-terminal domain N7988_08150 PF06445 GyrI-like small molecule binding domain N7988_08150 PF13411 MerR HTH family regulatory protein N7988_08160 PF04239 Protein of unknown function (DUF421) N7988_08165 PF02698 DUF218 domain N7988_08175 PF00881 Nitroreductase family N7988_08205 PF17209 Hfq protein N7988_08215 PF01618 MotA/TolQ/ExbB proton channel family N7988_08220 PF00691 OmpA family N7988_08220 PF13677 Membrane MotB of proton-channel complex MotA/MotB N7988_08225 PF00072 Response regulator receiver domain N7988_08230 PF01584 CheW-like domain N7988_08230 PF02895 Signal transducing histidine kinase, homodimeric domain N7988_08230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N7988_08230 PF01627 Hpt domain N7988_08230 PF07194 P2 response regulator binding domain N7988_08235 PF04509 CheC-like family N7988_08235 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term N7988_08250 PF01739 CheR methyltransferase, SAM binding domain N7988_08250 PF03705 CheR methyltransferase, all-alpha domain N7988_08270 PF00460 Flagella basal body rod protein N7988_08270 PF06429 Flagellar basal body rod FlgEFG protein C-terminal N7988_08275 PF00669 Bacterial flagellin N-terminal helical region N7988_08275 PF00700 Bacterial flagellin C-terminal helical region N7988_08295 PF00460 Flagella basal body rod protein N7988_08300 PF00460 Flagella basal body rod protein N7988_08300 PF06429 Flagellar basal body rod FlgEFG protein C-terminal N7988_08305 PF02049 Flagellar hook-basal body complex protein FliE N7988_08310 PF01514 Secretory protein of YscJ/FliF family N7988_08310 PF08345 Flagellar M-ring protein C-terminal N7988_08315 PF01706 FliG C-terminal domain N7988_08315 PF14841 FliG middle domain N7988_08315 PF14842 FliG N-terminal domain N7988_08325 PF18269 T3SS EscN ATPase C-terminal domain N7988_08325 PF02874 ATP synthase alpha/beta family, beta-barrel domain N7988_08325 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain N7988_08345 PF07559 Flagellar basal body protein FlaE N7988_08345 PF00460 Flagella basal body rod protein N7988_08345 PF06429 Flagellar basal body rod FlgEFG protein C-terminal N7988_08360 PF01584 CheW-like domain N7988_08360 PF00072 Response regulator receiver domain N7988_08365 PF12181 DNA binding domain of the motility gene repressor (MogR) N7988_08370 PF00669 Bacterial flagellin N-terminal helical region N7988_08370 PF00700 Bacterial flagellin C-terminal helical region N7988_08375 PF00700 Bacterial flagellin C-terminal helical region N7988_08375 PF00669 Bacterial flagellin N-terminal helical region N7988_08380 PF01464 Transglycosylase SLT domain N7988_08390 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term N7988_08390 PF02154 Flagellar motor switch protein FliM N7988_08395 PF04509 CheC-like family N7988_08395 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term N7988_08405 PF00813 FliP family N7988_08410 PF01313 Bacterial export proteins, family 3 N7988_08420 PF01312 FlhB HrpN YscU SpaS Family N7988_08425 PF00771 FHIPEP family N7988_08430 PF00448 SRP54-type protein, GTPase domain N7988_08435 PF00460 Flagella basal body rod protein N7988_08435 PF06429 Flagellar basal body rod FlgEFG protein C-terminal N7988_08440 PF02272 DHHA1 domain N7988_08440 PF01411 tRNA synthetases class II (A) N7988_08440 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain N7988_08475 PF03992 Antibiotic biosynthesis monooxygenase N7988_08480 PF08141 Small acid-soluble spore protein H family N7988_08500 PF03466 LysR substrate binding domain N7988_08500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N7988_08505 PF08402 TOBE domain N7988_08505 PF00005 ABC transporter N7988_08515 PF00528 Binding-protein-dependent transport system inner membrane component N7988_08530 PF10787 Uncharacterised protein from bacillus cereus group N7988_08550 PF00300 Histidine phosphatase superfamily (branch 1) N7988_08570 PF01047 MarR family N7988_08580 PF13537 Glutamine amidotransferase domain N7988_08580 PF00733 Asparagine synthase N7988_08600 PF01545 Cation efflux family N7988_08600 PF16916 Dimerisation domain of Zinc Transporter N7988_08610 PF07729 FCD domain N7988_08610 PF00392 Bacterial regulatory proteins, gntR family N7988_08615 PF00892 EamA-like transporter family N7988_08625 PF02492 CobW/HypB/UreG, nucleotide-binding domain N7988_08625 PF07683 Cobalamin synthesis protein cobW C-terminal domain N7988_08630 PF03773 Predicted permease N7988_08645 PF03553 Na+/H+ antiporter family N7988_08650 PF13411 MerR HTH family regulatory protein N7988_08660 PF00206 Lyase N7988_08660 PF10415 Fumarase C C-terminus N7988_08680 PF01554 MatE N7988_08685 PF03575 Peptidase family S51 N7988_08710 PF00578 AhpC/TSA family N7988_08715 PF01790 Prolipoprotein diacylglyceryl transferase N7988_08725 PF18801 response regulator aspartate phosphatase H, N terminal N7988_08740 PF00291 Pyridoxal-phosphate dependent enzyme N7988_08745 PF04286 Protein of unknown function (DUF445) N7988_08770 PF00072 Response regulator receiver domain N7988_08770 PF00196 Bacterial regulatory proteins, luxR family N7988_08775 PF13492 GAF domain N7988_08775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N7988_08775 PF13185 GAF domain N7988_08775 PF07730 Histidine kinase N7988_08780 PF00005 ABC transporter N7988_08800 PF13091 PLD-like domain N7988_08805 PF00696 Amino acid kinase family N7988_08810 PF00375 Sodium:dicarboxylate symporter family N7988_08815 PF10415 Fumarase C C-terminus N7988_08815 PF00206 Lyase N7988_08820 PF00390 Malic enzyme, N-terminal domain N7988_08820 PF03949 Malic enzyme, NAD binding domain N7988_08825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N7988_08830 PF00072 Response regulator receiver domain N7988_08830 PF08664 YcbB domain N7988_08835 PF00271 Helicase conserved C-terminal domain N7988_08835 PF00176 SNF2 family N-terminal domain N7988_08835 PF04434 SWIM zinc finger N7988_08845 PF03590 Aspartate-ammonia ligase N7988_08850 PF01381 Helix-turn-helix N7988_08860 PF00696 Amino acid kinase family N7988_08860 PF13840 ACT domain N7988_08870 PF13761 Domain of unknown function (DUF4166) N7988_08875 PF14158 YndJ-like protein N7988_08880 PF00293 NUDIX domain N7988_08880 PF09297 NADH pyrophosphatase zinc ribbon domain N7988_08885 PF07690 Major Facilitator Superfamily N7988_08895 PF03976 Polyphosphate kinase 2 (PPK2) N7988_08900 PF03551 Transcriptional regulator PadR-like family N7988_08900 PF10400 Virulence activator alpha C-term N7988_08905 PF07690 Major Facilitator Superfamily N7988_08910 PF07690 Major Facilitator Superfamily N7988_08915 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal N7988_08915 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III N7988_08920 PF13167 GTP-binding GTPase N-terminal N7988_08920 PF16360 GTP-binding GTPase Middle Region N7988_08920 PF01926 50S ribosome-binding GTPase N7988_08925 PF07690 Major Facilitator Superfamily N7988_08930 PF00291 Pyridoxal-phosphate dependent enzyme N7988_08950 PF00209 Sodium:neurotransmitter symporter family N7988_08960 PF04239 Protein of unknown function (DUF421) N7988_08980 PF01625 Peptide methionine sulfoxide reductase N7988_08990 PF01063 Amino-transferase class IV N7988_08995 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain N7988_08995 PF00205 Thiamine pyrophosphate enzyme, central domain N7988_08995 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain N7988_09005 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain N7988_09005 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain N7988_09010 PF00920 Dehydratase family N7988_09015 PF00585 C-terminal regulatory domain of Threonine dehydratase N7988_09015 PF00291 Pyridoxal-phosphate dependent enzyme N7988_09025 PF09587 Bacterial capsule synthesis protein PGA_cap N7988_09040 PF07690 Major Facilitator Superfamily N7988_09045 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase N7988_09055 PF04397 LytTr DNA-binding domain N7988_09055 PF00072 Response regulator receiver domain N7988_09060 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain N7988_09060 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain N7988_09065 PF13673 Acetyltransferase (GNAT) domain N7988_09075 PF01979 Amidohydrolase family N7988_09080 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle N7988_09085 PF13302 Acetyltransferase (GNAT) domain N7988_09090 PF00072 Response regulator receiver domain N7988_09090 PF00486 Transcriptional regulatory protein, C terminal N7988_09095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N7988_09095 PF00512 His Kinase A (phospho-acceptor) domain N7988_09105 PF01566 Natural resistance-associated macrophage protein N7988_09110 PF00581 Rhodanese-like domain N7988_09110 PF17773 UPF0176 acylphosphatase like domain N7988_09110 PF12368 Rhodanase C-terminal N7988_09120 PF08546 Ketopantoate reductase PanE/ApbA C terminal N7988_09120 PF02558 Ketopantoate reductase PanE/ApbA N7988_09130 PF13520 Amino acid permease N7988_09140 PF05791 Bacillus haemolytic enterotoxin (HBL) N7988_09145 PF05791 Bacillus haemolytic enterotoxin (HBL) N7988_09155 PF01906 Putative heavy-metal-binding N7988_09165 PF00440 Bacterial regulatory proteins, tetR family N7988_09175 PF04198 Putative sugar-binding domain N7988_09180 PF01791 DeoC/LacD family aldolase N7988_09185 PF07662 Na+ dependent nucleoside transporter C-terminus N7988_09185 PF01773 Na+ dependent nucleoside transporter N-terminus N7988_09190 PF02885 Glycosyl transferase family, helical bundle domain N7988_09190 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain N7988_09190 PF00591 Glycosyl transferase family, a/b domain N7988_09195 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region N7988_09205 PF07301 Protein of unknown function (DUF1453) N7988_09210 PF05979 Bacterial protein of unknown function (DUF896) N7988_09230 PF00557 Metallopeptidase family M24 N7988_09230 PF05195 Aminopeptidase P, N-terminal domain N7988_09240 PF07732 Multicopper oxidase N7988_09240 PF00394 Multicopper oxidase N7988_09240 PF07731 Multicopper oxidase N7988_09250 PF01751 Toprim domain N7988_09250 PF01131 DNA topoisomerase N7988_09250 PF01396 Topoisomerase DNA binding C4 zinc finger N7988_09250 PF13342 C-terminal repeat of topoisomerase N7988_09265 PF02525 Flavodoxin-like fold N7988_09270 PF05525 Branched-chain amino acid transport protein N7988_09280 PF04234 CopC domain N7988_09280 PF05425 Copper resistance protein D N7988_09280 PF13115 YtkA-like N7988_09285 PF07987 Domain of unkown function (DUF1775) N7988_09290 PF00892 EamA-like transporter family N7988_09295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N7988_09295 PF03466 LysR substrate binding domain N7988_09300 PF02082 Transcriptional regulator N7988_09305 PF01323 DSBA-like thioredoxin domain N7988_09310 PF00881 Nitroreductase family N7988_09320 PF01425 Amidase N7988_09325 PF01594 AI-2E family transporter N7988_09330 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain N7988_09330 PF00056 lactate/malate dehydrogenase, NAD binding domain N7988_09335 PF01593 Flavin containing amine oxidoreductase N7988_09340 PF07683 Cobalamin synthesis protein cobW C-terminal domain N7988_09340 PF02492 CobW/HypB/UreG, nucleotide-binding domain N7988_09350 PF00005 ABC transporter N7988_09350 PF12399 Branched-chain amino acid ATP-binding cassette transporter N7988_09355 PF00005 ABC transporter N7988_09360 PF02653 Branched-chain amino acid transport system / permease component N7988_09370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N7988_09370 PF03466 LysR substrate binding domain N7988_09380 PF14552 Tautomerase enzyme N7988_09390 PF01047 MarR family N7988_09400 PF01654 Cytochrome bd terminal oxidase subunit I N7988_09405 PF02322 Cytochrome bd terminal oxidase subunit II N7988_09410 PF00664 ABC transporter transmembrane region N7988_09410 PF00005 ABC transporter N7988_09415 PF00664 ABC transporter transmembrane region N7988_09415 PF00005 ABC transporter N7988_09425 PF00535 Glycosyl transferase family 2 N7988_09430 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family N7988_09435 PF00132 Bacterial transferase hexapeptide (six repeats) N7988_09460 PF02016 LD-carboxypeptidase N-terminal domain N7988_09460 PF17676 LD-carboxypeptidase C-terminal domain N7988_09465 PF07943 Penicillin-binding protein 5, C-terminal domain N7988_09465 PF00768 D-alanyl-D-alanine carboxypeptidase N7988_09480 PF01476 LysM domain N7988_09480 PF00877 NlpC/P60 family N7988_09490 PF00005 ABC transporter N7988_09490 PF00664 ABC transporter transmembrane region N7988_09495 PF00486 Transcriptional regulatory protein, C terminal N7988_09495 PF00072 Response regulator receiver domain N7988_09500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N7988_09500 PF00512 His Kinase A (phospho-acceptor) domain N7988_09500 PF00989 PAS fold N7988_09500 PF16736 Single Cache-like N7988_09505 PF00106 short chain dehydrogenase N7988_09510 PF04439 Streptomycin adenylyltransferase N7988_09515 PF01522 Polysaccharide deacetylase N7988_09535 PF03447 Homoserine dehydrogenase, NAD binding domain N7988_09535 PF01842 ACT domain N7988_09535 PF00742 Homoserine dehydrogenase N7988_09540 PF00291 Pyridoxal-phosphate dependent enzyme N7988_09545 PF00288 GHMP kinases N terminal domain N7988_09545 PF08544 GHMP kinases C terminal N7988_09560 PF03816 Cell envelope-related transcriptional attenuator domain N7988_09570 PF00072 Response regulator receiver domain N7988_09570 PF00486 Transcriptional regulatory protein, C terminal N7988_09575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N7988_09575 PF00512 His Kinase A (phospho-acceptor) domain N7988_09575 PF00989 PAS fold N7988_09575 PF16736 Single Cache-like N7988_09580 PF01522 Polysaccharide deacetylase N7988_09590 PF02308 MgtC family N7988_09595 PF00583 Acetyltransferase (GNAT) family N7988_09600 PF06276 Ferric iron reductase FhuF-like transporter N7988_09600 PF04183 IucA / IucC family N7988_09605 PF04183 IucA / IucC family N7988_09605 PF06276 Ferric iron reductase FhuF-like transporter N7988_09610 PF00501 AMP-binding enzyme N7988_09610 PF13193 AMP-binding enzyme C-terminal domain N7988_09625 PF01261 Xylose isomerase-like TIM barrel N7988_09630 PF00269 Small, acid-soluble spore proteins, alpha/beta type N7988_09635 PF07690 Major Facilitator Superfamily N7988_09640 PF01810 LysE type translocator N7988_09645 PF00392 Bacterial regulatory proteins, gntR family N7988_09645 PF00155 Aminotransferase class I and II N7988_09655 PF01734 Patatin-like phospholipase N7988_09680 PF13344 Haloacid dehalogenase-like hydrolase N7988_09680 PF00293 NUDIX domain N7988_09685 PF02540 NAD synthase N7988_09690 PF02687 FtsX-like permease family N7988_09695 PF18277 AbrB C-terminal domain N7988_09695 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin N7988_09700 PF00082 Subtilase family N7988_09705 PF01022 Bacterial regulatory protein, arsR family N7988_09710 PF00248 Aldo/keto reductase family N7988_09715 PF07690 Major Facilitator Superfamily N7988_09735 PF03193 RsgA GTPase N7988_09740 PF00672 HAMP domain N7988_09740 PF02743 Cache domain N7988_09740 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N7988_09760 PF00210 Ferritin-like domain N7988_09775 PF00296 Luciferase-like monooxygenase N7988_09785 PF01593 Flavin containing amine oxidoreductase N7988_09790 PF13302 Acetyltransferase (GNAT) domain N7988_09795 PF00248 Aldo/keto reductase family N7988_09800 PF07683 Cobalamin synthesis protein cobW C-terminal domain N7988_09800 PF02492 CobW/HypB/UreG, nucleotide-binding domain N7988_09805 PF00583 Acetyltransferase (GNAT) family N7988_09810 PF01297 Zinc-uptake complex component A periplasmic N7988_09820 PF13460 NAD(P)H-binding N7988_09825 PF00724 NADH:flavin oxidoreductase / NADH oxidase family N7988_09830 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain N7988_09830 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain N7988_09840 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle N7988_09845 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily N7988_09855 PF00300 Histidine phosphatase superfamily (branch 1) N7988_09865 PF08757 CotH kinase protein N7988_09870 PF00293 NUDIX domain N7988_09875 PF09335 SNARE associated Golgi protein N7988_09880 PF01943 Polysaccharide biosynthesis protein N7988_09880 PF14667 Polysaccharide biosynthesis C-terminal domain N7988_09890 PF03773 Predicted permease N7988_09895 PF09323 Domain of unknown function (DUF1980) N7988_09900 PF03061 Thioesterase superfamily N7988_09910 PF13091 PLD-like domain N7988_09910 PF13396 Phospholipase_D-nuclease N-terminal N7988_09925 PF13460 NAD(P)H-binding N7988_09930 PF04306 Protein of unknown function (DUF456) N7988_09935 PF00571 CBS domain N7988_09935 PF03471 Transporter associated domain N7988_09935 PF01595 Cyclin M transmembrane N-terminal domain N7988_09950 PF05525 Branched-chain amino acid transport protein N7988_09955 PF01588 Putative tRNA binding domain N7988_09975 PF07454 Stage II sporulation protein P (SpoIIP) N7988_09985 PF02557 D-alanyl-D-alanine carboxypeptidase N7988_09995 PF01425 Amidase N7988_10000 PF07690 Major Facilitator Superfamily N7988_10010 PF01145 SPFH domain / Band 7 family N7988_10015 PF07454 Stage II sporulation protein P (SpoIIP) N7988_10040 PF00842 Alanine racemase, C-terminal domain N7988_10040 PF01168 Alanine racemase, N-terminal domain N7988_10060 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase N7988_10065 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) N7988_10065 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 N7988_10070 PF00392 Bacterial regulatory proteins, gntR family N7988_10070 PF00155 Aminotransferase class I and II N7988_10100 PF00583 Acetyltransferase (GNAT) family N7988_10115 PF06013 Proteins of 100 residues with WXG N7988_10130 PF08817 WXG100 protein secretion system (Wss), protein YukD N7988_10135 PF10140 WXG100 protein secretion system (Wss), protein YukC N7988_10140 PF01580 FtsK/SpoIIIE family N7988_10140 PF12538 DNA transporter N7988_10205 PF09579 Sporulation protein YtfJ (Spore_YtfJ) N7988_10230 PF01209 ubiE/COQ5 methyltransferase family N7988_10235 PF01268 Formate--tetrahydrofolate ligase N7988_10245 PF00271 Helicase conserved C-terminal domain N7988_10245 PF00270 DEAD/DEAH box helicase N7988_10250 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily N7988_10260 PF00107 Zinc-binding dehydrogenase N7988_10260 PF08240 Alcohol dehydrogenase GroES-like domain N7988_10265 PF04542 Sigma-70 region 2 N7988_10265 PF08281 Sigma-70, region 4 N7988_10290 PF00255 Glutathione peroxidase N7988_10295 PF01841 Transglutaminase-like superfamily N7988_10295 PF13559 Domain of unknown function (DUF4129) N7988_10295 PF11992 Domain of unknown function (DUF3488) N7988_10300 PF01882 Protein of unknown function DUF58 N7988_10305 PF17863 AAA lid domain N7988_10305 PF07726 ATPase family associated with various cellular activities (AAA) N7988_10310 PF14710 Respiratory nitrate reductase alpha N-terminal N7988_10310 PF00384 Molybdopterin oxidoreductase N7988_10310 PF01568 Molydopterin dinucleotide binding domain N7988_10315 PF14711 Respiratory nitrate reductase beta C-terminal N7988_10315 PF13247 4Fe-4S dicluster domain N7988_10320 PF02613 Nitrate reductase delta subunit N7988_10325 PF02665 Nitrate reductase gamma subunit N7988_10330 PF00027 Cyclic nucleotide-binding domain N7988_10330 PF00325 Bacterial regulatory proteins, crp family N7988_10335 PF04055 Radical SAM superfamily N7988_10335 PF06463 Molybdenum Cofactor Synthesis C N7988_10340 PF00899 ThiF family N7988_10345 PF03453 MoeA N-terminal region (domain I and II) N7988_10345 PF03454 MoeA C-terminal region (domain IV) N7988_10345 PF00994 Probable molybdopterin binding domain N7988_10350 PF02391 MoaE protein N7988_10355 PF02597 ThiS family N7988_10360 PF07690 Major Facilitator Superfamily N7988_10385 PF01903 CbiX N7988_10390 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases N7988_10395 PF00355 Rieske [2Fe-2S] domain N7988_10400 PF18267 Rubredoxin NAD+ reductase C-terminal domain N7988_10400 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain N7988_10400 PF01077 Nitrite and sulphite reductase 4Fe-4S domain N7988_10400 PF04324 BFD-like [2Fe-2S] binding domain N7988_10400 PF07992 Pyridine nucleotide-disulphide oxidoreductase N7988_10405 PF01814 Hemerythrin HHE cation binding domain N7988_10405 PF04405 Domain of Unknown function (DUF542) N7988_10440 PF04232 Stage V sporulation protein S (SpoVS) N7988_10475 PF01966 HD domain N7988_10480 PF00005 ABC transporter N7988_10480 PF16326 ABC transporter C-terminal domain N7988_10480 PF12848 ABC transporter N7988_10495 PF00436 Single-strand binding protein family N7988_10510 PF08712 Scaffold protein Nfu/NifU N terminal N7988_10510 PF13769 Virulence factor N7988_10520 PF06491 Disulphide isomerase N7988_10525 PF04445 Putative SAM-dependent methyltransferase N7988_10530 PF00750 tRNA synthetases class I (R) N7988_10530 PF05746 DALR anticodon binding domain N7988_10530 PF03485 Arginyl tRNA synthetase N terminal domain N7988_10555 PF00133 tRNA synthetases class I (I, L, M and V) N7988_10555 PF08264 Anticodon-binding domain of tRNA N7988_10585 PF00152 tRNA synthetases class II (D, K and N) N7988_10585 PF01336 OB-fold nucleic acid binding domain N7988_10590 PF00209 Sodium:neurotransmitter symporter family N7988_10605 PF10997 Alternate to MurJ N7988_10610 PF13419 Haloacid dehalogenase-like hydrolase N7988_10620 PF00465 Iron-containing alcohol dehydrogenase N7988_10625 PF01177 Asp/Glu/Hydantoin racemase N7988_10630 PF01980 tRNA-methyltransferase O N7988_10635 PF00583 Acetyltransferase (GNAT) family N7988_10640 PF11188 Protein of unknown function (DUF2975) N7988_10645 PF13443 Cro/C1-type HTH DNA-binding domain N7988_10650 PF08645 Polynucleotide kinase 3 phosphatase N7988_10660 PF00005 ABC transporter N7988_10665 PF05975 Bacterial ABC transporter protein EcsB N7988_10670 PF14005 YpjP-like protein N7988_10675 PF13419 Haloacid dehalogenase-like hydrolase N7988_10690 PF07930 D-aminopeptidase, domain B N7988_10690 PF00144 Beta-lactamase N7988_10695 PF00303 Thymidylate synthase N7988_10700 PF00186 Dihydrofolate reductase N7988_10705 PF03717 Penicillin-binding Protein dimerisation domain N7988_10705 PF05223 NTF2-like N-terminal transpeptidase domain N7988_10705 PF00905 Penicillin binding protein transpeptidase domain N7988_10710 PF02525 Flavodoxin-like fold N7988_10715 PF01553 Acyltransferase N7988_10720 PF03006 Haemolysin-III related N7988_10725 PF02416 mttA/Hcf106 family N7988_10730 PF00902 Sec-independent protein translocase protein (TatC) N7988_10740 PF02645 Uncharacterised protein, DegV family COG1307 N7988_10750 PF02630 SCO1/SenC N7988_10755 PF00011 Hsp20/alpha crystallin family N7988_10760 PF00733 Asparagine synthase N7988_10760 PF13537 Glutamine amidotransferase domain N7988_10775 PF01520 N-acetylmuramoyl-L-alanine amidase N7988_10775 PF05036 Sporulation related domain N7988_10780 PF01497 Periplasmic binding protein N7988_10785 PF01063 Amino-transferase class IV N7988_10790 PF00881 Nitroreductase family N7988_10800 PF00857 Isochorismatase family N7988_10810 PF00011 Hsp20/alpha crystallin family N7988_10815 PF00924 Mechanosensitive ion channel N7988_10820 PF13185 GAF domain N7988_10820 PF07730 Histidine kinase N7988_10825 PF00196 Bacterial regulatory proteins, luxR family N7988_10825 PF00072 Response regulator receiver domain N7988_10830 PF01418 Helix-turn-helix domain, rpiR family N7988_10830 PF01380 SIS domain N7988_10835 PF02567 Phenazine biosynthesis-like protein N7988_10840 PF08240 Alcohol dehydrogenase GroES-like domain N7988_10840 PF00107 Zinc-binding dehydrogenase N7988_10855 PF00370 FGGY family of carbohydrate kinases, N-terminal domain N7988_10855 PF02782 FGGY family of carbohydrate kinases, C-terminal domain N7988_10860 PF02447 GntP family permease N7988_10865 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase N7988_10865 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain N7988_10870 PF10924 Protein of unknown function (DUF2711) N7988_10885 PF03358 NADPH-dependent FMN reductase N7988_10900 PF00005 ABC transporter N7988_10900 PF00571 CBS domain N7988_10905 PF00528 Binding-protein-dependent transport system inner membrane component N7988_10910 PF13520 Amino acid permease N7988_10940 PF03471 Transporter associated domain N7988_10940 PF01595 Cyclin M transmembrane N-terminal domain N7988_10940 PF00571 CBS domain N7988_10945 PF00171 Aldehyde dehydrogenase family N7988_10950 PF07997 Protein of unknown function (DUF1694) N7988_10955 PF09385 Histidine kinase N terminal N7988_10965 PF00202 Aminotransferase class-III N7988_10970 PF01144 Coenzyme A transferase N7988_10975 PF01144 Coenzyme A transferase N7988_10980 PF07687 Peptidase dimerisation domain N7988_10980 PF01546 Peptidase family M20/M25/M40 N7988_10985 PF00583 Acetyltransferase (GNAT) family N7988_10990 PF00158 Sigma-54 interaction domain N7988_10990 PF02954 Bacterial regulatory protein, Fis family N7988_10990 PF13426 PAS domain N7988_10995 PF12544 Lysine-2,3-aminomutase N7988_11000 PF14122 YokU-like protein, putative antitoxin N7988_11005 PF06855 YozE SAM-like fold N7988_11015 PF13408 Recombinase zinc beta ribbon domain N7988_11015 PF07508 Recombinase N7988_11015 PF00239 Resolvase, N terminal domain N7988_11080 PF14162 YozD-like protein N7988_11090 PF08239 Bacterial SH3 domain N7988_11090 PF00069 Protein kinase domain N7988_11100 PF01569 PAP2 superfamily N7988_11105 PF16916 Dimerisation domain of Zinc Transporter N7988_11105 PF01545 Cation efflux family N7988_11110 PF00085 Thioredoxin N7988_11170 PF10676 Spore germination protein gerPA/gerPF N7988_11185 PF00106 short chain dehydrogenase N7988_11205 PF00905 Penicillin binding protein transpeptidase domain N7988_11205 PF00912 Transglycosylase N7988_11215 PF07690 Major Facilitator Superfamily N7988_11220 PF01521 Iron-sulphur cluster biosynthesis N7988_11225 PF00285 Citrate synthase, C-terminal domain N7988_11230 PF03972 MmgE/PrpD family N7988_11240 PF02770 Acyl-CoA dehydrogenase, middle domain N7988_11240 PF02771 Acyl-CoA dehydrogenase, N-terminal domain N7988_11240 PF00441 Acyl-CoA dehydrogenase, C-terminal domain N7988_11245 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase N7988_11245 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase N7988_11250 PF00171 Aldehyde dehydrogenase family N7988_11255 PF01810 LysE type translocator N7988_11260 PF00378 Enoyl-CoA hydratase/isomerase N7988_11275 PF00149 Calcineurin-like phosphoesterase N7988_11275 PF12320 Type 5 capsule protein repressor C-terminal domain N7988_11280 PF13476 AAA domain N7988_11290 PF01022 Bacterial regulatory protein, arsR family N7988_11300 PF07690 Major Facilitator Superfamily N7988_11305 PF00106 short chain dehydrogenase N7988_11310 PF00425 chorismate binding enzyme N7988_11315 PF13193 AMP-binding enzyme C-terminal domain N7988_11315 PF00501 AMP-binding enzyme N7988_11320 PF00857 Isochorismatase family N7988_11320 PF00550 Phosphopantetheine attachment site N7988_11325 PF00501 AMP-binding enzyme N7988_11325 PF13193 AMP-binding enzyme C-terminal domain N7988_11325 PF00668 Condensation domain N7988_11325 PF00975 Thioesterase domain N7988_11325 PF00550 Phosphopantetheine attachment site N7988_11330 PF03621 MbtH-like protein N7988_11335 PF07690 Major Facilitator Superfamily N7988_11350 PF00216 Bacterial DNA-binding protein N7988_11360 PF05163 DinB family N7988_11365 PF00082 Subtilase family N7988_11370 PF01235 Sodium:alanine symporter family N7988_11390 PF01479 S4 domain N7988_11390 PF00849 RNA pseudouridylate synthase N7988_11395 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) N7988_11395 PF02824 TGS domain N7988_11395 PF03129 Anticodon binding domain N7988_11395 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain N7988_11400 PF00005 ABC transporter N7988_11415 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain N7988_11415 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain N7988_11415 PF00205 Thiamine pyrophosphate enzyme, central domain N7988_11455 PF00027 Cyclic nucleotide-binding domain N7988_11490 PF03176 MMPL family N7988_11500 PF00302 Chloramphenicol acetyltransferase N7988_11515 PF00583 Acetyltransferase (GNAT) family N7988_11540 PF01593 Flavin containing amine oxidoreductase N7988_11550 PF13302 Acetyltransferase (GNAT) domain N7988_11560 PF00313 'Cold-shock' DNA-binding domain N7988_11580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N7988_11580 PF03466 LysR substrate binding domain N7988_11585 PF01118 Semialdehyde dehydrogenase, NAD binding domain N7988_11585 PF02774 Semialdehyde dehydrogenase, dimerisation domain N7988_11605 PF03466 LysR substrate binding domain N7988_11605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N7988_11610 PF03473 MOSC domain N7988_11610 PF03475 3-alpha domain N7988_11625 PF00005 ABC transporter N7988_11625 PF00664 ABC transporter transmembrane region N7988_11630 PF00005 ABC transporter N7988_11630 PF00664 ABC transporter transmembrane region N7988_11650 PF01810 LysE type translocator N7988_11655 PF01381 Helix-turn-helix N7988_11655 PF07883 Cupin domain N7988_11695 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain N7988_11695 PF07992 Pyridine nucleotide-disulphide oxidoreductase N7988_11700 PF04542 Sigma-70 region 2 N7988_11700 PF08281 Sigma-70, region 4 N7988_11700 PF12680 SnoaL-like domain N7988_11725 PF02638 Glycosyl hydrolase-like 10 N7988_11735 PF02378 Phosphotransferase system, EIIC N7988_11745 PF03702 Anhydro-N-acetylmuramic acid kinase N7988_11750 PF01869 BadF/BadG/BcrA/BcrD ATPase family N7988_11755 PF02660 Glycerol-3-phosphate acyltransferase N7988_11760 PF00266 Aminotransferase class-V N7988_11765 PF00291 Pyridoxal-phosphate dependent enzyme N7988_11770 PF01047 MarR family N7988_11775 PF07690 Major Facilitator Superfamily N7988_11790 PF16123 Hydroxyacylglutathione hydrolase C-terminus N7988_11790 PF00753 Metallo-beta-lactamase superfamily N7988_11800 PF00270 DEAD/DEAH box helicase N7988_11800 PF00271 Helicase conserved C-terminal domain N7988_11810 PF17932 Tetracyclin repressor-like, C-terminal domain N7988_11810 PF00440 Bacterial regulatory proteins, tetR family N7988_11830 PF09313 Domain of unknown function (DUF1971) N7988_11830 PF03848 Tellurite resistance protein TehB N7988_11845 PF00205 Thiamine pyrophosphate enzyme, central domain N7988_11845 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain N7988_11845 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain N7988_11850 PF01047 MarR family N7988_11855 PF00300 Histidine phosphatase superfamily (branch 1) N7988_11860 PF14171 Toxin SpoIISA, type II toxin-antitoxin system N7988_11880 PF01546 Peptidase family M20/M25/M40 N7988_11880 PF07687 Peptidase dimerisation domain N7988_11895 PF00196 Bacterial regulatory proteins, luxR family N7988_11895 PF00072 Response regulator receiver domain N7988_11905 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin N7988_11905 PF18277 AbrB C-terminal domain N7988_11920 PF01925 Sulfite exporter TauE/SafE N7988_11925 PF00132 Bacterial transferase hexapeptide (six repeats) N7988_11930 PF00768 D-alanyl-D-alanine carboxypeptidase N7988_11930 PF07943 Penicillin-binding protein 5, C-terminal domain N7988_11945 PF07690 Major Facilitator Superfamily N7988_11950 PF13193 AMP-binding enzyme C-terminal domain N7988_11950 PF00550 Phosphopantetheine attachment site N7988_11950 PF00501 AMP-binding enzyme N7988_11950 PF00668 Condensation domain N7988_11955 PF00668 Condensation domain N7988_11955 PF00501 AMP-binding enzyme N7988_11955 PF07993 Male sterility protein N7988_11955 PF00550 Phosphopantetheine attachment site N7988_11955 PF13193 AMP-binding enzyme C-terminal domain N7988_11960 PF00501 AMP-binding enzyme N7988_11960 PF13193 AMP-binding enzyme C-terminal domain N7988_11960 PF00668 Condensation domain N7988_11960 PF00550 Phosphopantetheine attachment site N7988_11965 PF01648 4'-phosphopantetheinyl transferase superfamily N7988_11970 PF00975 Thioesterase domain N7988_11990 PF10042 Uncharacterized conserved protein (DUF2278) N7988_11995 PF05139 Erythromycin esterase N7988_12010 PF13302 Acetyltransferase (GNAT) domain N7988_12030 PF14436 Bacterial EndoU nuclease N7988_12030 PF04740 LXG domain of WXG superfamily N7988_12050 PF12323 Helix-turn-helix domain N7988_12050 PF07282 Putative transposase DNA-binding domain N7988_12050 PF01385 Probable transposase N7988_12080 PF00027 Cyclic nucleotide-binding domain N7988_12080 PF01734 Patatin-like phospholipase N7988_12090 PF03315 Serine dehydratase beta chain N7988_12090 PF01842 ACT domain N7988_12095 PF03313 Serine dehydratase alpha chain N7988_12130 PF00282 Pyridoxal-dependent decarboxylase conserved domain N7988_12160 PF01098 Cell cycle protein N7988_12165 PF01769 Divalent cation transporter N7988_12165 PF03448 MgtE intracellular N domain N7988_12165 PF00571 CBS domain N7988_12175 PF05223 NTF2-like N-terminal transpeptidase domain N7988_12175 PF03717 Penicillin-binding Protein dimerisation domain N7988_12175 PF00905 Penicillin binding protein transpeptidase domain N7988_12180 PF08281 Sigma-70, region 4 N7988_12180 PF04542 Sigma-70 region 2 N7988_12190 PF03717 Penicillin-binding Protein dimerisation domain N7988_12190 PF00905 Penicillin binding protein transpeptidase domain N7988_12195 PF03717 Penicillin-binding Protein dimerisation domain N7988_12195 PF00905 Penicillin binding protein transpeptidase domain N7988_12205 PF00149 Calcineurin-like phosphoesterase N7988_12215 PF00005 ABC transporter N7988_12225 PF00440 Bacterial regulatory proteins, tetR family N7988_12225 PF08359 YsiA-like protein, C-terminal region N7988_12240 PF02771 Acyl-CoA dehydrogenase, N-terminal domain N7988_12240 PF02770 Acyl-CoA dehydrogenase, middle domain N7988_12240 PF00441 Acyl-CoA dehydrogenase, C-terminal domain N7988_12245 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain N7988_12245 PF00289 Biotin carboxylase, N-terminal domain N7988_12245 PF02785 Biotin carboxylase C-terminal domain N7988_12250 PF00364 Biotin-requiring enzyme N7988_12255 PF00682 HMGL-like N7988_12260 PF00378 Enoyl-CoA hydratase/isomerase N7988_12265 PF01039 Carboxyl transferase domain N7988_12270 PF13193 AMP-binding enzyme C-terminal domain N7988_12270 PF00501 AMP-binding enzyme N7988_12270 PF16177 Acetyl-coenzyme A synthetase N-terminus N7988_12305 PF00485 Phosphoribulokinase / Uridine kinase family N7988_12325 PF07943 Penicillin-binding protein 5, C-terminal domain N7988_12325 PF00768 D-alanyl-D-alanine carboxypeptidase N7988_12330 PF00512 His Kinase A (phospho-acceptor) domain N7988_12330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N7988_12335 PF00486 Transcriptional regulatory protein, C terminal N7988_12335 PF00072 Response regulator receiver domain N7988_12340 PF01966 HD domain N7988_12350 PF01048 Phosphorylase superfamily N7988_12365 PF02868 Thermolysin metallopeptidase, alpha-helical domain N7988_12365 PF01447 Thermolysin metallopeptidase, catalytic domain N7988_12365 PF03413 Peptidase propeptide and YPEB domain N7988_12365 PF07504 Fungalysin/Thermolysin Propeptide Motif N7988_12370 PF12833 Helix-turn-helix domain N7988_12370 PF17853 GGDEF-like domain N7988_12400 PF09278 MerR, DNA binding N7988_12400 PF00376 MerR family regulatory protein N7988_12410 PF01638 HxlR-like helix-turn-helix N7988_12430 PF13732 Domain of unknown function (DUF4162) N7988_12430 PF00005 ABC transporter N7988_12455 PF00892 EamA-like transporter family N7988_12460 PF00155 Aminotransferase class I and II N7988_12460 PF00392 Bacterial regulatory proteins, gntR family N7988_12465 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal N7988_12465 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal N7988_12480 PF08240 Alcohol dehydrogenase GroES-like domain N7988_12480 PF00107 Zinc-binding dehydrogenase N7988_12490 PF04239 Protein of unknown function (DUF421) N7988_12495 PF01965 DJ-1/PfpI family N7988_12505 PF08450 SMP-30/Gluconolactonase/LRE-like region N7988_12515 PF01921 tRNA synthetases class I (K) N7988_12520 PF07486 Cell Wall Hydrolase N7988_12530 PF00486 Transcriptional regulatory protein, C terminal N7988_12530 PF00072 Response regulator receiver domain N7988_12535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N7988_12540 PF00005 ABC transporter N7988_12540 PF12848 ABC transporter N7988_12550 PF00005 ABC transporter N7988_12555 PF02687 FtsX-like permease family N7988_12575 PF00742 Homoserine dehydrogenase N7988_12575 PF03447 Homoserine dehydrogenase, NAD binding domain N7988_12575 PF01842 ACT domain N7988_12580 PF00155 Aminotransferase class I and II N7988_12580 PF00392 Bacterial regulatory proteins, gntR family N7988_12585 PF07478 D-ala D-ala ligase C-terminus N7988_12585 PF01820 D-ala D-ala ligase N-terminus N7988_12590 PF03070 TENA/THI-4/PQQC family N7988_12620 PF14659 Phage integrase, N-terminal SAM-like domain N7988_12620 PF00589 Phage integrase family N7988_12645 PF01381 Helix-turn-helix N7988_12670 PF18277 AbrB C-terminal domain N7988_12670 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin N7988_12740 PF00589 Phage integrase family N7988_12750 PF00144 Beta-lactamase N7988_12870 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase N7988_12870 PF13457 GW (Gly-Tryp) dipeptide domain N7988_12920 PF00067 Cytochrome P450 N7988_12930 PF00132 Bacterial transferase hexapeptide (six repeats) N7988_12935 PF07561 Domain of Unknown Function (DUF1540) N7988_12945 PF00067 Cytochrome P450 N7988_12960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N7988_12960 PF00512 His Kinase A (phospho-acceptor) domain N7988_12960 PF00989 PAS fold N7988_12960 PF13188 PAS domain N7988_12960 PF13426 PAS domain N7988_12965 PF00905 Penicillin binding protein transpeptidase domain N7988_12965 PF03717 Penicillin-binding Protein dimerisation domain N7988_12970 PF10502 Signal peptidase, peptidase S26 N7988_12975 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase N7988_12980 PF01177 Asp/Glu/Hydantoin racemase N7988_12985 PF07155 ECF-type riboflavin transporter, S component N7988_12990 PF00005 ABC transporter N7988_12990 PF12558 ATP-binding cassette cobalt transporter N7988_13005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N7988_13005 PF00512 His Kinase A (phospho-acceptor) domain N7988_13010 PF14659 Phage integrase, N-terminal SAM-like domain N7988_13010 PF00589 Phage integrase family N7988_13035 PF01545 Cation efflux family N7988_13035 PF16916 Dimerisation domain of Zinc Transporter N7988_13040 PF10676 Spore germination protein gerPA/gerPF N7988_13065 PF04229 GrpB protein N7988_13075 PF00072 Response regulator receiver domain N7988_13075 PF00486 Transcriptional regulatory protein, C terminal N7988_13080 PF18719 ArlS sensor domain N7988_13080 PF00512 His Kinase A (phospho-acceptor) domain N7988_13080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N7988_13085 PF00107 Zinc-binding dehydrogenase N7988_13085 PF08240 Alcohol dehydrogenase GroES-like domain N7988_13090 PF01569 PAP2 superfamily N7988_13095 PF03793 PASTA domain N7988_13095 PF03717 Penicillin-binding Protein dimerisation domain N7988_13095 PF00905 Penicillin binding protein transpeptidase domain N7988_13140 PF07690 Major Facilitator Superfamily N7988_13160 PF03009 Glycerophosphoryl diester phosphodiesterase family N7988_13175 PF00155 Aminotransferase class I and II N7988_13175 PF00392 Bacterial regulatory proteins, gntR family N7988_13180 PF00892 EamA-like transporter family N7988_13185 PF01270 Glycosyl hydrolases family 8 N7988_13190 PF01156 Inosine-uridine preferring nucleoside hydrolase N7988_13200 PF01784 NIF3 (NGG1p interacting factor 3) N7988_13205 PF00293 NUDIX domain N7988_13205 PF13344 Haloacid dehalogenase-like hydrolase N7988_13215 PF00144 Beta-lactamase N7988_13225 PF07690 Major Facilitator Superfamily N7988_13235 PF00293 NUDIX domain N7988_13235 PF09297 NADH pyrophosphatase zinc ribbon domain N7988_13240 PF02767 DNA polymerase III beta subunit, central domain N7988_13240 PF02768 DNA polymerase III beta subunit, C-terminal domain N7988_13240 PF00712 DNA polymerase III beta subunit, N-terminal domain N7988_13260 PF09234 Domain of unknown function (DUF1963) N7988_13285 PF01734 Patatin-like phospholipase N7988_13290 PF08000 Bacterial PH domain N7988_13300 PF12867 DinB superfamily N7988_13315 PF02673 Bacitracin resistance protein BacA N7988_13325 PF01541 GIY-YIG catalytic domain N7988_13365 PF01266 FAD dependent oxidoreductase N7988_13395 PF13419 Haloacid dehalogenase-like hydrolase N7988_13400 PF00072 Response regulator receiver domain N7988_13400 PF00486 Transcriptional regulatory protein, C terminal N7988_13405 PF00989 PAS fold N7988_13405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N7988_13405 PF00512 His Kinase A (phospho-acceptor) domain N7988_13405 PF16736 Single Cache-like N7988_13420 PF00005 ABC transporter N7988_13425 PF02687 FtsX-like permease family N7988_13425 PF12704 MacB-like periplasmic core domain N7988_13435 PF07859 alpha/beta hydrolase fold N7988_13440 PF00282 Pyridoxal-dependent decarboxylase conserved domain N7988_13445 PF00501 AMP-binding enzyme N7988_13445 PF13193 AMP-binding enzyme C-terminal domain N7988_13445 PF00668 Condensation domain N7988_13445 PF00550 Phosphopantetheine attachment site N7988_13455 PF03714 Bacterial pullanase-associated domain N7988_13455 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) N7988_13455 PF00128 Alpha amylase, catalytic domain N7988_13460 PF02868 Thermolysin metallopeptidase, alpha-helical domain N7988_13460 PF01447 Thermolysin metallopeptidase, catalytic domain N7988_13460 PF03413 Peptidase propeptide and YPEB domain N7988_13460 PF07504 Fungalysin/Thermolysin Propeptide Motif N7988_13465 PF02872 5'-nucleotidase, C-terminal domain N7988_13465 PF00149 Calcineurin-like phosphoesterase N7988_13480 PF00344 SecY translocase N7988_13485 PF00892 EamA-like transporter family N7988_13490 PF00155 Aminotransferase class I and II N7988_13490 PF00392 Bacterial regulatory proteins, gntR family N7988_13495 PF00561 alpha/beta hydrolase fold N7988_13520 PF06081 Aromatic acid exporter family member 1 N7988_13520 PF06081 Aromatic acid exporter family member 1 N7988_13535 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) N7988_13540 PF03413 Peptidase propeptide and YPEB domain N7988_13540 PF14620 YpeB sporulation N7988_13545 PF07486 Cell Wall Hydrolase N7988_13545 PF01471 Putative peptidoglycan binding domain N7988_13565 PF03301 Tryptophan 2,3-dioxygenase N7988_13570 PF04199 Putative cyclase N7988_13575 PF00266 Aminotransferase class-V N7988_13580 PF00440 Bacterial regulatory proteins, tetR family N7988_13580 PF08359 YsiA-like protein, C-terminal region N7988_13585 PF13344 Haloacid dehalogenase-like hydrolase N7988_13585 PF00293 NUDIX domain N7988_13610 PF01590 GAF domain N7988_13610 PF02954 Bacterial regulatory protein, Fis family N7988_13610 PF00158 Sigma-54 interaction domain N7988_13620 PF13302 Acetyltransferase (GNAT) domain N7988_13625 PF00455 DeoR C terminal sensor domain N7988_13625 PF08220 DeoR-like helix-turn-helix domain N7988_13640 PF02082 Transcriptional regulator N7988_13655 PF07992 Pyridine nucleotide-disulphide oxidoreductase N7988_13655 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain N7988_13660 PF00364 Biotin-requiring enzyme N7988_13660 PF02817 e3 binding domain N7988_13660 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) N7988_13665 PF02779 Transketolase, pyrimidine binding domain N7988_13665 PF02780 Transketolase, C-terminal domain N7988_13670 PF00676 Dehydrogenase E1 component N7988_13680 PF07690 Major Facilitator Superfamily N7988_13690 PF00106 short chain dehydrogenase N7988_13695 PF13789 Domain of unknown function (DUF4181) N7988_13720 PF00528 Binding-protein-dependent transport system inner membrane component N7988_13725 PF00571 CBS domain N7988_13725 PF00005 ABC transporter N7988_13730 PF04069 Substrate binding domain of ABC-type glycine betaine transport system N7988_13735 PF00574 Clp protease N7988_13750 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) N7988_13755 PF13673 Acetyltransferase (GNAT) domain N7988_13760 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading N7988_13760 PF18416 N-acetylglucosamine binding protein domain 2 N7988_13765 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase N7988_13770 PF03781 Sulfatase-modifying factor enzyme 1 N7988_13785 PF10990 Protein of unknown function (DUF2809) N7988_13790 PF08241 Methyltransferase domain N7988_13795 PF04237 YjbR N7988_13840 PF00583 Acetyltransferase (GNAT) family N7988_13845 PF13538 UvrD-like helicase C-terminal domain N7988_13855 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like N7988_13860 PF09382 RQC domain N7988_13860 PF16124 RecQ zinc-binding N7988_13860 PF00570 HRDC domain N7988_13860 PF00270 DEAD/DEAH box helicase N7988_13860 PF00271 Helicase conserved C-terminal domain N7988_13890 PF12123 N-acetylmuramoyl-l-alanine amidase N7988_13890 PF01510 N-acetylmuramoyl-L-alanine amidase N7988_13910 PF01368 DHH family N7988_13910 PF02833 DHHA2 domain N7988_13915 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading N7988_13915 PF18416 N-acetylglucosamine binding protein domain 2 N7988_13930 PF03193 RsgA GTPase N7988_13935 PF02627 Carboxymuconolactone decarboxylase family N7988_13940 PF01235 Sodium:alanine symporter family N7988_13945 PF00171 Aldehyde dehydrogenase family N7988_13950 PF00701 Dihydrodipicolinate synthetase family N7988_13955 PF05544 Proline racemase N7988_13960 PF05544 Proline racemase N7988_13965 PF01266 FAD dependent oxidoreductase N7988_13970 PF02954 Bacterial regulatory protein, Fis family N7988_13970 PF13426 PAS domain N7988_13970 PF00158 Sigma-54 interaction domain N7988_13975 PF04324 BFD-like [2Fe-2S] binding domain N7988_13975 PF07992 Pyridine nucleotide-disulphide oxidoreductase N7988_13985 PF04324 BFD-like [2Fe-2S] binding domain N7988_13985 PF07992 Pyridine nucleotide-disulphide oxidoreductase N7988_14000 PF08876 Domain of unknown function (DUF1836) N7988_14005 PF09335 SNARE associated Golgi protein N7988_14015 PF04914 DltD protein N7988_14025 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle N7988_14030 PF00877 NlpC/P60 family N7988_14030 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain N7988_14035 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain N7988_14035 PF13378 Enolase C-terminal domain-like N7988_14050 PF00248 Aldo/keto reductase family N7988_14085 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain N7988_14085 PF02129 X-Pro dipeptidyl-peptidase (S15 family) N7988_14095 PF00672 HAMP domain N7988_14095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N7988_14095 PF00512 His Kinase A (phospho-acceptor) domain N7988_14100 PF00072 Response regulator receiver domain N7988_14100 PF00486 Transcriptional regulatory protein, C terminal N7988_14120 PF13419 Haloacid dehalogenase-like hydrolase N7988_14125 PF01048 Phosphorylase superfamily N7988_14130 PF03808 Glycosyl transferase WecB/TagA/CpsF family N7988_14135 PF08439 Oligopeptidase F N7988_14135 PF01432 Peptidase family M3 N7988_14140 PF13520 Amino acid permease N7988_14145 PF01037 Lrp/AsnC ligand binding domain N7988_14150 PF02645 Uncharacterised protein, DegV family COG1307 N7988_14155 PF07552 Spore Coat Protein X and V domain N7988_14190 PF07690 Major Facilitator Superfamily N7988_14200 PF04519 Polymer-forming cytoskeletal N7988_14205 PF13171 Protein of unknown function (DUF4004) N7988_14210 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle N7988_14210 PF12793 Sugar transport-related sRNA regulator N-term N7988_14215 PF07690 Major Facilitator Superfamily N7988_14240 PF04226 Transglycosylase associated protein N7988_14290 PF00155 Aminotransferase class I and II N7988_14295 PF07977 FabA-like domain N7988_14300 PF03630 Fumble N7988_14320 PF00005 ABC transporter N7988_14365 PF01594 AI-2E family transporter N7988_14380 PF00296 Luciferase-like monooxygenase N7988_14385 PF00528 Binding-protein-dependent transport system inner membrane component N7988_14390 PF09084 NMT1/THI5 like N7988_14395 PF00005 ABC transporter N7988_14420 PF02522 Aminoglycoside 3-N-acetyltransferase N7988_14440 PF13536 Putative multidrug resistance efflux transporter N7988_14465 PF08713 DNA alkylation repair enzyme N7988_14470 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily N7988_14475 PF01522 Polysaccharide deacetylase N7988_14480 PF03741 Integral membrane protein TerC family N7988_14485 PF00884 Sulfatase N7988_14490 PF00005 ABC transporter N7988_14490 PF12848 ABC transporter N7988_14495 PF03176 MMPL family N7988_14500 PF00440 Bacterial regulatory proteins, tetR family N7988_14500 PF16295 Tetracyclin repressor-like, C-terminal domain N7988_14510 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) N7988_14515 PF02153 Prephenate dehydrogenase N7988_14515 PF01842 ACT domain N7988_14520 PF00155 Aminotransferase class I and II N7988_14525 PF01264 Chorismate synthase N7988_14530 PF01817 Chorismate mutase type II N7988_14530 PF00793 DAHP synthetase I family N7988_14550 PF01636 Phosphotransferase enzyme family N7988_14575 PF06725 3D domain N7988_14575 PF01476 LysM domain N7988_14585 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily N7988_14590 PF01565 FAD binding domain N7988_14590 PF08031 Berberine and berberine like N7988_14610 PF06039 Malate:quinone oxidoreductase (Mqo) N7988_14615 PF13407 Periplasmic binding protein domain N7988_14620 PF02653 Branched-chain amino acid transport system / permease component N7988_14625 PF02653 Branched-chain amino acid transport system / permease component N7988_14630 PF00005 ABC transporter N7988_14635 PF00325 Bacterial regulatory proteins, crp family N7988_14635 PF04198 Putative sugar-binding domain N7988_14640 PF00370 FGGY family of carbohydrate kinases, N-terminal domain N7988_14640 PF02782 FGGY family of carbohydrate kinases, C-terminal domain N7988_14650 PF01791 DeoC/LacD family aldolase N7988_14660 PF03992 Antibiotic biosynthesis monooxygenase N7988_14680 PF07662 Na+ dependent nucleoside transporter C-terminus N7988_14680 PF01773 Na+ dependent nucleoside transporter N-terminus N7988_14685 PF00171 Aldehyde dehydrogenase family N7988_14690 PF01472 PUA domain N7988_14690 PF00696 Amino acid kinase family N7988_14695 PF03807 NADP oxidoreductase coenzyme F420-dependent N7988_14695 PF14748 Pyrroline-5-carboxylate reductase dimerisation N7988_14700 PF01546 Peptidase family M20/M25/M40 N7988_14705 PF01614 Bacterial transcriptional regulator N7988_14705 PF09339 IclR helix-turn-helix domain N7988_14710 PF00324 Amino acid permease N7988_14720 PF00487 Fatty acid desaturase N7988_14725 PF05547 Immune inhibitor A peptidase M6 N7988_14730 PF04294 VanW like protein N7988_14735 PF00245 Alkaline phosphatase N7988_14740 PF11188 Protein of unknown function (DUF2975) N7988_14745 PF13443 Cro/C1-type HTH DNA-binding domain N7988_14770 PF13302 Acetyltransferase (GNAT) domain N7988_14775 PF12681 Glyoxalase-like domain N7988_14795 PF07726 ATPase family associated with various cellular activities (AAA) N7988_14795 PF17863 AAA lid domain N7988_14815 PF07690 Major Facilitator Superfamily N7988_14825 PF00535 Glycosyl transferase family 2 N7988_14840 PF00535 Glycosyl transferase family 2 N7988_14845 PF00535 Glycosyl transferase family 2 N7988_14855 PF00202 Aminotransferase class-III N7988_14860 PF06628 Catalase-related immune-responsive N7988_14860 PF00199 Catalase N7988_14865 PF04151 Bacterial pre-peptidase C-terminal domain N7988_14865 PF08453 Peptidase family M9 N-terminal N7988_14865 PF01752 Collagenase N7988_14865 PF18496 Collagenase G catalytic helper subdomain N7988_14875 PF01979 Amidohydrolase family N7988_14875 PF13382 Adenine deaminase C-terminal domain N7988_14880 PF00144 Beta-lactamase N7988_14900 PF17863 AAA lid domain N7988_14900 PF07726 ATPase family associated with various cellular activities (AAA) N7988_14910 PF09346 SMI1 / KNR4 family (SUKH-1) N7988_14985 PF14436 Bacterial EndoU nuclease N7988_14985 PF04740 LXG domain of WXG superfamily N7988_15005 PF00881 Nitroreductase family N7988_15010 PF01047 MarR family N7988_15015 PF00679 Elongation factor G C-terminus N7988_15015 PF00009 Elongation factor Tu GTP binding domain N7988_15015 PF03764 Elongation factor G, domain IV N7988_15015 PF14492 Elongation Factor G, domain II N7988_15025 PF00293 NUDIX domain N7988_15030 PF05406 WGR domain N7988_15040 PF16363 GDP-mannose 4,6 dehydratase N7988_15070 PF12833 Helix-turn-helix domain N7988_15075 PF01171 PP-loop family N7988_15075 PF14437 MafB19-like deaminase N7988_15075 PF11734 TilS substrate C-terminal domain N7988_15085 PF00583 Acetyltransferase (GNAT) family N7988_15100 PF00892 EamA-like transporter family N7988_15105 PF00392 Bacterial regulatory proteins, gntR family N7988_15105 PF00155 Aminotransferase class I and II N7988_15110 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 N7988_15115 PF13031 Protein of unknown function (DUF3892) N7988_15145 PF01925 Sulfite exporter TauE/SafE N7988_15155 PF00324 Amino acid permease N7988_15165 PF08713 DNA alkylation repair enzyme N7988_15185 PF10502 Signal peptidase, peptidase S26 N7988_15190 PF03717 Penicillin-binding Protein dimerisation domain N7988_15190 PF00905 Penicillin binding protein transpeptidase domain N7988_15200 PF02146 Sir2 family N7988_15205 PF01470 Pyroglutamyl peptidase N7988_15220 PF03746 LamB/YcsF family N7988_15225 PF02626 Carboxyltransferase domain, subdomain A and B N7988_15230 PF02682 Carboxyltransferase domain, subdomain C and D N7988_15235 PF09339 IclR helix-turn-helix domain N7988_15235 PF01614 Bacterial transcriptional regulator N7988_15240 PF10502 Signal peptidase, peptidase S26 N7988_15245 PF03932 CutC family N7988_15255 PF00271 Helicase conserved C-terminal domain N7988_15255 PF04851 Type III restriction enzyme, res subunit N7988_15265 PF02771 Acyl-CoA dehydrogenase, N-terminal domain N7988_15265 PF02770 Acyl-CoA dehydrogenase, middle domain N7988_15265 PF08028 Acyl-CoA dehydrogenase, C-terminal domain N7988_15280 PF07670 Nucleoside recognition N7988_15295 PF10903 Protein of unknown function (DUF2691) N7988_15300 PF02915 Rubrerythrin N7988_15315 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain N7988_15315 PF00391 PEP-utilising enzyme, mobile domain N7988_15325 PF13537 Glutamine amidotransferase domain N7988_15325 PF00733 Asparagine synthase N7988_15330 PF03466 LysR substrate binding domain N7988_15330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N7988_15360 PF01609 Transposase DDE domain N7988_15375 PF01037 Lrp/AsnC ligand binding domain N7988_15385 PF00753 Metallo-beta-lactamase superfamily N7988_15390 PF10710 Protein of unknown function (DUF2512) N7988_15395 PF11553 Protein of unknown function (DUF3231) N7988_15400 PF00269 Small, acid-soluble spore proteins, alpha/beta type N7988_15405 PF00107 Zinc-binding dehydrogenase N7988_15405 PF08240 Alcohol dehydrogenase GroES-like domain N7988_15405 PF13823 Alcohol dehydrogenase GroES-associated N7988_15415 PF10415 Fumarase C C-terminus N7988_15415 PF00206 Lyase N7988_15420 PF00710 Asparaginase, N-terminal N7988_15420 PF17763 Glutaminase/Asparaginase C-terminal domain N7988_15425 PF01381 Helix-turn-helix N7988_15440 PF05504 Spore germination B3/ GerAC like, C-terminal N7988_15445 PF03845 Spore germination protein N7988_15450 PF03323 Bacillus/Clostridium GerA spore germination protein N7988_15455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N7988_15455 PF00512 His Kinase A (phospho-acceptor) domain N7988_15455 PF00989 PAS fold N7988_15455 PF13188 PAS domain N7988_15455 PF13426 PAS domain N7988_15460 PF05791 Bacillus haemolytic enterotoxin (HBL) N7988_15465 PF05791 Bacillus haemolytic enterotoxin (HBL) N7988_15480 PF17853 GGDEF-like domain N7988_15480 PF12833 Helix-turn-helix domain N7988_15490 PF00269 Small, acid-soluble spore proteins, alpha/beta type N7988_15495 PF12826 Helix-hairpin-helix motif N7988_15495 PF02151 UvrB/uvrC motif N7988_15495 PF08459 UvrC Helix-hairpin-helix N-terminal N7988_15495 PF01541 GIY-YIG catalytic domain N7988_15500 PF13520 Amino acid permease N7988_15505 PF14748 Pyrroline-5-carboxylate reductase dimerisation N7988_15505 PF03807 NADP oxidoreductase coenzyme F420-dependent N7988_15510 PF05504 Spore germination B3/ GerAC like, C-terminal N7988_15515 PF03845 Spore germination protein N7988_15520 PF03323 Bacillus/Clostridium GerA spore germination protein N7988_15525 PF00072 Response regulator receiver domain N7988_15525 PF08664 YcbB domain N7988_15530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N7988_15535 PF04960 Glutaminase N7988_15540 PF01235 Sodium:alanine symporter family N7988_15555 PF00144 Beta-lactamase N7988_15560 PF00149 Calcineurin-like phosphoesterase N7988_15560 PF17936 Bacterial Ig domain N7988_15560 PF02872 5'-nucleotidase, C-terminal domain N7988_15565 PF00561 alpha/beta hydrolase fold N7988_15570 PF00857 Isochorismatase family N7988_15585 PF01979 Amidohydrolase family N7988_15590 PF03466 LysR substrate binding domain N7988_15590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N7988_15595 PF01544 CorA-like Mg2+ transporter protein N7988_15610 PF11181 Heat induced stress protein YflT N7988_15615 PF12146 Serine aminopeptidase, S33 N7988_15615 PF13026 Protein of unknown function (DUF3887) N7988_15630 PF03073 TspO/MBR family N7988_15635 PF03441 FAD binding domain of DNA photolyase N7988_15635 PF00875 DNA photolyase N7988_15655 PF00512 His Kinase A (phospho-acceptor) domain N7988_15655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N7988_15660 PF00072 Response regulator receiver domain N7988_15660 PF00486 Transcriptional regulatory protein, C terminal N7988_15670 PF07690 Major Facilitator Superfamily N7988_15680 PF07859 alpha/beta hydrolase fold N7988_15690 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) N7988_15695 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus N7988_15695 PF00361 Proton-conducting membrane transporter N7988_15700 PF10057 Uncharacterized conserved protein (DUF2294) N7988_15705 PF07690 Major Facilitator Superfamily N7988_15725 PF01522 Polysaccharide deacetylase N7988_15730 PF00583 Acetyltransferase (GNAT) family N7988_15735 PF01040 UbiA prenyltransferase family N7988_15740 PF12833 Helix-turn-helix domain N7988_15740 PF01965 DJ-1/PfpI family N7988_15755 PF01451 Low molecular weight phosphotyrosine protein phosphatase N7988_15760 PF01758 Sodium Bile acid symporter family N7988_15765 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily N7988_15770 PF01022 Bacterial regulatory protein, arsR family N7988_15780 PF02517 CPBP intramembrane metalloprotease N7988_15785 PF01609 Transposase DDE domain N7988_15820 PF00550 Phosphopantetheine attachment site N7988_15820 PF07993 Male sterility protein N7988_15825 PF00440 Bacterial regulatory proteins, tetR family N7988_15825 PF18665 Tetracyclin repressor-like, C-terminal domain N7988_15830 PF07690 Major Facilitator Superfamily N7988_15835 PF00440 Bacterial regulatory proteins, tetR family N7988_15845 PF01037 Lrp/AsnC ligand binding domain N7988_15860 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily N7988_15905 PF01810 LysE type translocator N7988_15965 PF00258 Flavodoxin N7988_15965 PF00175 Oxidoreductase NAD-binding domain N7988_15965 PF00067 Cytochrome P450 N7988_15965 PF00667 FAD binding domain N7988_15970 PF07690 Major Facilitator Superfamily N7988_15985 PF00291 Pyridoxal-phosphate dependent enzyme N7988_15995 PF01139 tRNA-splicing ligase RtcB N7988_16005 PF04072 Leucine carboxyl methyltransferase N7988_16020 PF00005 ABC transporter N7988_16025 PF02687 FtsX-like permease family N7988_16030 PF00672 HAMP domain N7988_16030 PF00512 His Kinase A (phospho-acceptor) domain N7988_16030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N7988_16035 PF00486 Transcriptional regulatory protein, C terminal N7988_16035 PF00072 Response regulator receiver domain N7988_16040 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) N7988_16040 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 N7988_16070 PF01842 ACT domain N7988_16070 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain N7988_16070 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain N7988_16075 PF00266 Aminotransferase class-V N7988_16105 PF01471 Putative peptidoglycan binding domain N7988_16105 PF01476 LysM domain N7988_16105 PF01510 N-acetylmuramoyl-L-alanine amidase N7988_16330 PF04493 Endonuclease V N7988_16400 PF02557 D-alanyl-D-alanine carboxypeptidase N7988_16405 PF09587 Bacterial capsule synthesis protein PGA_cap N7988_16410 PF14044 NETI protein N7988_16415 PF07690 Major Facilitator Superfamily N7988_16425 PF12697 Alpha/beta hydrolase family N7988_16430 PF01047 MarR family N7988_16435 PF07690 Major Facilitator Superfamily N7988_16450 PF02667 Short chain fatty acid transporter N7988_16480 PF14256 YwiC-like protein N7988_16490 PF00005 ABC transporter N7988_16510 PF03737 Aldolase/RraA N7988_16515 PF03606 C4-dicarboxylate anaerobic carrier N7988_16520 PF04231 Endonuclease I N7988_16535 PF04073 Aminoacyl-tRNA editing domain N7988_16540 PF03129 Anticodon binding domain N7988_16540 PF13393 Histidyl-tRNA synthetase N7988_16545 PF01638 HxlR-like helix-turn-helix N7988_16550 PF00881 Nitroreductase family N7988_16560 PF02887 Pyruvate kinase, alpha/beta domain N7988_16560 PF00391 PEP-utilising enzyme, mobile domain N7988_16560 PF00224 Pyruvate kinase, barrel domain N7988_16590 PF00005 ABC transporter N7988_16615 PF13419 Haloacid dehalogenase-like hydrolase N7988_16625 PF13350 Tyrosine phosphatase family N7988_16645 PF13344 Haloacid dehalogenase-like hydrolase N7988_16645 PF00293 NUDIX domain N7988_16650 PF00579 tRNA synthetases class I (W and Y) N7988_16655 PF13288 DXP reductoisomerase C-terminal domain N7988_16655 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain N7988_16655 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase N7988_16660 PF01594 AI-2E family transporter N7988_16690 PF08003 Protein of unknown function (DUF1698) N7988_16700 PF07690 Major Facilitator Superfamily N7988_16720 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) N7988_16730 PF01595 Cyclin M transmembrane N-terminal domain N7988_16730 PF03471 Transporter associated domain N7988_16730 PF00571 CBS domain N7988_16735 PF13411 MerR HTH family regulatory protein N7988_16745 PF00483 Nucleotidyl transferase N7988_16750 PF16363 GDP-mannose 4,6 dehydratase N7988_16755 PF08421 Putative zinc binding domain N7988_16755 PF08484 C-methyltransferase C-terminal domain N7988_16760 PF01370 NAD dependent epimerase/dehydratase family N7988_16775 PF00892 EamA-like transporter family N7988_16785 PF00805 Pentapeptide repeats (8 copies) N7988_16790 PF06906 Protein of unknown function (DUF1272) N7988_16795 PF10282 Lactonase, 7-bladed beta-propeller N7988_16800 PF02782 FGGY family of carbohydrate kinases, C-terminal domain N7988_16800 PF00370 FGGY family of carbohydrate kinases, N-terminal domain N7988_16805 PF02447 GntP family permease N7988_16810 PF00923 Transaldolase/Fructose-6-phosphate aldolase N7988_16815 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain N7988_16815 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase N7988_16820 PF02779 Transketolase, pyrimidine binding domain N7988_16820 PF02780 Transketolase, C-terminal domain N7988_16820 PF00456 Transketolase, thiamine diphosphate binding domain N7988_16825 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain N7988_16825 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain N7988_16835 PF02801 Beta-ketoacyl synthase, C-terminal domain N7988_16835 PF08659 KR domain N7988_16835 PF00550 Phosphopantetheine attachment site N7988_16835 PF14765 Polyketide synthase dehydratase N7988_16835 PF16197 Ketoacyl-synthetase C-terminal extension N7988_16835 PF00107 Zinc-binding dehydrogenase N7988_16835 PF08240 Alcohol dehydrogenase GroES-like domain N7988_16835 PF00109 Beta-ketoacyl synthase, N-terminal domain N7988_16835 PF00698 Acyl transferase domain N7988_16840 PF02868 Thermolysin metallopeptidase, alpha-helical domain N7988_16840 PF01447 Thermolysin metallopeptidase, catalytic domain N7988_16840 PF03413 Peptidase propeptide and YPEB domain N7988_16840 PF07504 Fungalysin/Thermolysin Propeptide Motif N7988_16850 PF00672 HAMP domain N7988_16850 PF12729 Four helix bundle sensory module for signal transduction N7988_16850 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N7988_16855 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) N7988_16860 PF01872 RibD C-terminal domain N7988_16860 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region N7988_16865 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase N7988_16865 PF00925 GTP cyclohydrolase II N7988_16870 PF01638 HxlR-like helix-turn-helix N7988_16880 PF03928 Haem-degrading N7988_16895 PF03831 PhnA domain N7988_16895 PF08274 PhnA Zinc-Ribbon N7988_16900 PF01740 STAS domain N7988_16900 PF00916 Sulfate permease family N7988_16940 PF03960 ArsC family N7988_16945 PF00392 Bacterial regulatory proteins, gntR family N7988_16945 PF07702 UTRA domain N7988_16950 PF02894 Oxidoreductase family, C-terminal alpha/beta domain N7988_16950 PF01408 Oxidoreductase family, NAD-binding Rossmann fold N7988_16990 PF02567 Phenazine biosynthesis-like protein N7988_17010 PF13302 Acetyltransferase (GNAT) domain N7988_17015 PF00501 AMP-binding enzyme N7988_17015 PF13193 AMP-binding enzyme C-terminal domain N7988_17020 PF02525 Flavodoxin-like fold N7988_17025 PF01638 HxlR-like helix-turn-helix N7988_17035 PF01022 Bacterial regulatory protein, arsR family N7988_17040 PF01522 Polysaccharide deacetylase N7988_17045 PF12791 Anti-sigma factor N-terminus N7988_17050 PF04542 Sigma-70 region 2 N7988_17055 PF00535 Glycosyl transferase family 2 N7988_17055 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 N7988_17085 PF05656 Protein of unknown function (DUF805) N7988_17090 PF01061 ABC-2 type transporter N7988_17095 PF13732 Domain of unknown function (DUF4162) N7988_17095 PF00005 ABC transporter N7988_17115 PF03063 Prismane/CO dehydrogenase family N7988_17120 PF00753 Metallo-beta-lactamase superfamily N7988_17140 PF00144 Beta-lactamase N7988_17180 PF00753 Metallo-beta-lactamase superfamily N7988_17190 PF00324 Amino acid permease N7988_17195 PF07690 Major Facilitator Superfamily N7988_17220 PF02585 GlcNAc-PI de-N-acetylase N7988_17225 PF08830 Protein of unknown function (DUF1806) N7988_17230 PF03600 Citrate transporter N7988_17240 PF00583 Acetyltransferase (GNAT) family N7988_17245 PF01497 Periplasmic binding protein N7988_17250 PF01032 FecCD transport family N7988_17255 PF01032 FecCD transport family N7988_17265 PF13170 Protein of unknown function (DUF4003) N7988_17295 PF13302 Acetyltransferase (GNAT) domain N7988_17300 PF10901 Protein of unknown function (DUF2690) N7988_17310 PF03466 LysR substrate binding domain N7988_17310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N7988_17315 PF08240 Alcohol dehydrogenase GroES-like domain N7988_17315 PF00107 Zinc-binding dehydrogenase N7988_17320 PF05175 Methyltransferase small domain N7988_17320 PF17827 PrmC N-terminal domain N7988_17335 PF01713 Smr domain N7988_17335 PF00488 MutS domain V N7988_17340 PF00128 Alpha amylase, catalytic domain N7988_17340 PF09154 Domain of unknown function (DUF1939) N7988_17345 PF00797 N-acetyltransferase N7988_17350 PF08439 Oligopeptidase F N7988_17350 PF01432 Peptidase family M3 N7988_17355 PF04371 Porphyromonas-type peptidyl-arginine deiminase N7988_17370 PF04371 Porphyromonas-type peptidyl-arginine deiminase N7988_17375 PF00144 Beta-lactamase N7988_17390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N7988_17390 PF03466 LysR substrate binding domain N7988_17400 PF03009 Glycerophosphoryl diester phosphodiesterase family N7988_17405 PF01494 FAD binding domain N7988_17415 PF01022 Bacterial regulatory protein, arsR family N7988_17420 PF08240 Alcohol dehydrogenase GroES-like domain N7988_17420 PF00107 Zinc-binding dehydrogenase N7988_17425 PF02696 Uncharacterized ACR, YdiU/UPF0061 family N7988_17435 PF18801 response regulator aspartate phosphatase H, N terminal N7988_17445 PF01758 Sodium Bile acid symporter family N7988_17450 PF01565 FAD binding domain N7988_17450 PF02913 FAD linked oxidases, C-terminal domain N7988_17475 PF01066 CDP-alcohol phosphatidyltransferase N7988_17480 PF00753 Metallo-beta-lactamase superfamily N7988_17480 PF00581 Rhodanese-like domain N7988_17485 PF07992 Pyridine nucleotide-disulphide oxidoreductase N7988_17495 PF00388 Phosphatidylinositol-specific phospholipase C, X domain N7988_17500 PF18416 N-acetylglucosamine binding protein domain 2 N7988_17500 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading N7988_17510 PF03323 Bacillus/Clostridium GerA spore germination protein N7988_17530 PF00483 Nucleotidyl transferase N7988_17540 PF01370 NAD dependent epimerase/dehydratase family N7988_17545 PF16363 GDP-mannose 4,6 dehydratase N7988_17550 PF18801 response regulator aspartate phosphatase H, N terminal N7988_17560 PF00672 HAMP domain N7988_17560 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N7988_17560 PF02743 Cache domain N7988_17590 PF00553 Cellulose binding domain N7988_17590 PF00041 Fibronectin type III domain N7988_17590 PF00704 Glycosyl hydrolases family 18 N7988_17610 PF03707 Bacterial signalling protein N terminal repeat N7988_17610 PF00990 Diguanylate cyclase, GGDEF domain N7988_17610 PF00563 EAL domain N7988_17615 PF16326 ABC transporter C-terminal domain N7988_17615 PF00005 ABC transporter N7988_17645 PF00512 His Kinase A (phospho-acceptor) domain N7988_17645 PF00989 PAS fold N7988_17645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N7988_17650 PF18496 Collagenase G catalytic helper subdomain N7988_17650 PF01752 Collagenase N7988_17650 PF08453 Peptidase family M9 N-terminal N7988_17655 PF02308 MgtC family N7988_17665 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily N7988_17670 PF04294 VanW like protein N7988_17680 PF13037 Domain of unknown function (DUF3898) N7988_17680 PF13039 Protein of unknown function (DUF3900) N7988_17695 PF00313 'Cold-shock' DNA-binding domain N7988_17705 PF00258 Flavodoxin N7988_17720 PF00293 NUDIX domain N7988_17730 PF00132 Bacterial transferase hexapeptide (six repeats) N7988_17740 PF00106 short chain dehydrogenase N7988_17750 PF14698 Argininosuccinate lyase C-terminal N7988_17750 PF00206 Lyase N7988_17760 PF01156 Inosine-uridine preferring nucleoside hydrolase N7988_17765 PF00474 Sodium:solute symporter family N7988_17775 PF00171 Aldehyde dehydrogenase family N7988_17785 PF14151 YfhD-like protein N7988_17790 PF13243 Squalene-hopene cyclase C-terminal domain N7988_17790 PF13249 Squalene-hopene cyclase N-terminal domain N7988_17795 PF02681 Divergent PAP2 family N7988_17800 PF00892 EamA-like transporter family N7988_17805 PF06961 Protein of unknown function (DUF1294) N7988_17820 PF10609 NUBPL iron-transfer P-loop NTPase N7988_17830 PF02391 MoaE protein N7988_17835 PF00994 Probable molybdopterin binding domain N7988_17835 PF03454 MoeA C-terminal region (domain IV) N7988_17835 PF03453 MoeA N-terminal region (domain I and II) N7988_17840 PF00899 ThiF family N7988_17845 PF01226 Formate/nitrite transporter N7988_17850 PF04055 Radical SAM superfamily N7988_17850 PF06463 Molybdenum Cofactor Synthesis C N7988_17855 PF02634 FdhD/NarQ family N7988_17860 PF10057 Uncharacterized conserved protein (DUF2294) N7988_17865 PF07849 Protein of unknown function (DUF1641) N7988_17870 PF04879 Molybdopterin oxidoreductase Fe4S4 domain N7988_17870 PF00384 Molybdopterin oxidoreductase N7988_17870 PF01568 Molydopterin dinucleotide binding domain N7988_17870 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region N7988_17870 PF00037 4Fe-4S binding domain N7988_17875 PF03323 Bacillus/Clostridium GerA spore germination protein N7988_17890 PF13520 Amino acid permease N7988_17925 PF08241 Methyltransferase domain N7988_17930 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle N7988_17935 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle N7988_17940 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle N7988_17955 PF04542 Sigma-70 region 2 N7988_17955 PF08281 Sigma-70, region 4 N7988_17965 PF13732 Domain of unknown function (DUF4162) N7988_17965 PF00005 ABC transporter N7988_17985 PF02894 Oxidoreductase family, C-terminal alpha/beta domain N7988_17985 PF01408 Oxidoreductase family, NAD-binding Rossmann fold N7988_17990 PF03989 DNA gyrase C-terminal domain, beta-propeller N7988_17990 PF00521 DNA gyrase/topoisomerase IV, subunit A N7988_17995 PF00204 DNA gyrase B N7988_17995 PF00986 DNA gyrase B subunit, carboxyl terminus N7988_17995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N7988_17995 PF01751 Toprim domain N7988_18000 PF13380 CoA binding domain N7988_18005 PF13180 PDZ domain N7988_18010 PF00072 Response regulator receiver domain N7988_18010 PF00486 Transcriptional regulatory protein, C terminal N7988_18015 PF04055 Radical SAM superfamily N7988_18020 PF03477 ATP cone domain N7988_18020 PF13597 Anaerobic ribonucleoside-triphosphate reductase N7988_18025 PF02660 Glycerol-3-phosphate acyltransferase N7988_18030 PF01521 Iron-sulphur cluster biosynthesis N7988_18035 PF03061 Thioesterase superfamily N7988_18040 PF07282 Putative transposase DNA-binding domain N7988_18040 PF01385 Probable transposase N7988_18040 PF12323 Helix-turn-helix domain N7988_18045 PF00704 Glycosyl hydrolases family 18 N7988_18045 PF01476 LysM domain N7988_18055 PF08177 Small acid-soluble spore protein N family N7988_18060 PF13040 Fur-regulated basic protein B N7988_18065 PF01336 OB-fold nucleic acid binding domain N7988_18065 PF00929 Exonuclease N7988_18065 PF02811 PHP domain N7988_18065 PF14579 Helix-hairpin-helix motif N7988_18065 PF17657 Bacterial DNA polymerase III alpha subunit finger domain N7988_18065 PF07733 Bacterial DNA polymerase III alpha NTPase domain N7988_18065 PF11490 DNA polymerase III polC-type N-terminus II N7988_18070 PF00578 AhpC/TSA family N7988_18085 PF00005 ABC transporter N7988_18085 PF00664 ABC transporter transmembrane region N7988_18090 PF00330 Aconitase family (aconitate hydratase) N7988_18090 PF00694 Aconitase C-terminal domain N7988_18100 PF01522 Polysaccharide deacetylase N7988_18110 PF08179 Small acid-soluble spore protein P family N7988_18120 PF07690 Major Facilitator Superfamily N7988_18130 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain N7988_18130 PF01411 tRNA synthetases class II (A) N7988_18130 PF02272 DHHA1 domain N7988_18135 PF13344 Haloacid dehalogenase-like hydrolase N7988_18135 PF00293 NUDIX domain N7988_18145 PF02803 Thiolase, C-terminal domain N7988_18145 PF00108 Thiolase, N-terminal domain N7988_18150 PF00501 AMP-binding enzyme N7988_18150 PF13193 AMP-binding enzyme C-terminal domain N7988_18155 PF02632 BioY family N7988_18160 PF13193 AMP-binding enzyme C-terminal domain N7988_18160 PF00501 AMP-binding enzyme N7988_18165 PF01381 Helix-turn-helix N7988_18185 PF05532 CsbD-like N7988_18190 PF03824 High-affinity nickel-transport protein N7988_18195 PF02293 AmiS/UreI family transporter N7988_18200 PF01774 UreD urease accessory protein N7988_18205 PF02492 CobW/HypB/UreG, nucleotide-binding domain N7988_18210 PF01730 UreF N7988_18215 PF05194 UreE urease accessory protein, C-terminal domain N7988_18215 PF02814 UreE urease accessory protein, N-terminal domain N7988_18220 PF00449 Urease alpha-subunit, N-terminal domain N7988_18220 PF01979 Amidohydrolase family N7988_18225 PF00699 Urease beta subunit N7988_18230 PF00547 Urease, gamma subunit N7988_18250 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 N7988_18250 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) N7988_18260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N7988_18260 PF00512 His Kinase A (phospho-acceptor) domain N7988_18260 PF00989 PAS fold N7988_18260 PF13426 PAS domain N7988_18260 PF13188 PAS domain N7988_18265 PF01738 Dienelactone hydrolase family N7988_18270 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily N7988_18280 PF01645 Conserved region in glutamate synthase N7988_18285 PF00724 NADH:flavin oxidoreductase / NADH oxidase family N7988_18290 PF02559 CarD-like/TRCF domain N7988_18295 PF00491 Arginase family N7988_18300 PF01979 Amidohydrolase family N7988_18305 PF17392 Urocanase C-terminal domain N7988_18305 PF01175 Urocanase Rossmann-like domain N7988_18305 PF17391 Urocanase N-terminal domain N7988_18310 PF00221 Aromatic amino acid lyase N7988_18315 PF09021 HutP N7988_18320 PF01209 ubiE/COQ5 methyltransferase family N7988_18340 PF11084 Protein of unknown function (DUF2621) N7988_18345 PF07301 Protein of unknown function (DUF1453) N7988_18350 PF02683 Cytochrome C biogenesis protein transmembrane region N7988_18360 PF07687 Peptidase dimerisation domain N7988_18360 PF01546 Peptidase family M20/M25/M40 N7988_18370 PF00005 ABC transporter N7988_18385 PF03466 LysR substrate binding domain N7988_18385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N7988_18390 PF03788 LrgA family N7988_18395 PF04172 LrgB-like family N7988_18400 PF00293 NUDIX domain N7988_18400 PF13344 Haloacid dehalogenase-like hydrolase N7988_18410 PF01925 Sulfite exporter TauE/SafE N7988_18430 PF01183 Glycosyl hydrolases family 25 N7988_18430 PF08239 Bacterial SH3 domain N7988_18435 PF00664 ABC transporter transmembrane region N7988_18435 PF00005 ABC transporter N7988_18440 PF00664 ABC transporter transmembrane region N7988_18440 PF00005 ABC transporter N7988_18445 PF03672 Uncharacterised protein family (UPF0154) N7988_18450 PF10747 Sporulation inhibitor of replication protein SirA N7988_18455 PF02779 Transketolase, pyrimidine binding domain N7988_18455 PF00456 Transketolase, thiamine diphosphate binding domain N7988_18455 PF02780 Transketolase, C-terminal domain N7988_18460 PF00528 Binding-protein-dependent transport system inner membrane component N7988_18465 PF00528 Binding-protein-dependent transport system inner membrane component N7988_18470 PF00005 ABC transporter N7988_18475 PF00497 Bacterial extracellular solute-binding proteins, family 3 N7988_18480 PF02872 5'-nucleotidase, C-terminal domain N7988_18480 PF00149 Calcineurin-like phosphoesterase N7988_18485 PF05979 Bacterial protein of unknown function (DUF896) N7988_18490 PF00239 Resolvase, N terminal domain N7988_18495 PF01726 LexA DNA binding domain N7988_18495 PF00717 Peptidase S24-like N7988_18510 PF03551 Transcriptional regulator PadR-like family N7988_18520 PF01551 Peptidase family M23 N7988_18520 PF10145 Phage-related minor tail protein N7988_18520 PF01464 Transglycosylase SLT domain N7988_18560 PF01726 LexA DNA binding domain N7988_18560 PF00717 Peptidase S24-like N7988_18565 PF03951 Glutamine synthetase, beta-Grasp domain N7988_18565 PF00120 Glutamine synthetase, catalytic domain N7988_18570 PF13411 MerR HTH family regulatory protein N7988_18575 PF06838 Methionine gamma-lyase N7988_18580 PF01926 50S ribosome-binding GTPase N7988_18580 PF13167 GTP-binding GTPase N-terminal N7988_18580 PF16360 GTP-binding GTPase Middle Region N7988_18585 PF03458 UPF0126 domain N7988_18595 PF17866 AAA lid domain N7988_18595 PF00004 ATPase family associated with various cellular activities (AAA) N7988_18610 PF17209 Hfq protein N7988_18625 PF06725 3D domain N7988_18625 PF01476 LysM domain N7988_18630 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 N7988_18630 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit N7988_18635 PF00294 pfkB family carbohydrate kinase N7988_18640 PF08220 DeoR-like helix-turn-helix domain N7988_18640 PF00455 DeoR C terminal sensor domain N7988_18645 PF00465 Iron-containing alcohol dehydrogenase N7988_18650 PF04238 Protein of unknown function (DUF420) N7988_18660 PF00324 Amino acid permease N7988_18665 PF00704 Glycosyl hydrolases family 18 N7988_18665 PF00041 Fibronectin type III domain N7988_18670 PF10518 TAT (twin-arginine translocation) pathway signal sequence N7988_18670 PF00149 Calcineurin-like phosphoesterase N7988_18675 PF01226 Formate/nitrite transporter N7988_18680 PF00216 Bacterial DNA-binding protein N7988_18690 PF00403 Heavy-metal-associated domain N7988_18695 PF00403 Heavy-metal-associated domain N7988_18700 PF02583 Metal-sensitive transcriptional repressor N7988_18710 PF00756 Putative esterase N7988_18715 PF00005 ABC transporter N7988_18720 PF01032 FecCD transport family N7988_18725 PF01032 FecCD transport family N7988_18730 PF01497 Periplasmic binding protein N7988_18740 PF12833 Helix-turn-helix domain N7988_18740 PF02805 Metal binding domain of Ada N7988_18745 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain N7988_18745 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain N7988_18750 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain N7988_18750 PF00730 HhH-GPD superfamily base excision DNA repair protein N7988_18755 PF01546 Peptidase family M20/M25/M40 N7988_18755 PF07687 Peptidase dimerisation domain N7988_18770 PF00561 alpha/beta hydrolase fold N7988_18775 PF03707 Bacterial signalling protein N terminal repeat N7988_18775 PF00563 EAL domain N7988_18775 PF00990 Diguanylate cyclase, GGDEF domain N7988_18780 PF04101 Glycosyltransferase family 28 C-terminal domain N7988_18780 PF03033 Glycosyltransferase family 28 N-terminal domain N7988_18790 PF16363 GDP-mannose 4,6 dehydratase N7988_18795 PF02719 Polysaccharide biosynthesis protein N7988_18795 PF08485 Polysaccharide biosynthesis protein C-terminal N7988_18810 PF10787 Uncharacterised protein from bacillus cereus group N7988_18815 PF04172 LrgB-like family N7988_18820 PF03788 LrgA family N7988_18825 PF00155 Aminotransferase class I and II N7988_18825 PF00392 Bacterial regulatory proteins, gntR family N7988_18835 PF00392 Bacterial regulatory proteins, gntR family N7988_18835 PF07702 UTRA domain N7988_18840 PF00232 Glycosyl hydrolase family 1 N7988_18845 PF00388 Phosphatidylinositol-specific phospholipase C, X domain N7988_18850 PF00082 Subtilase family N7988_18855 PF07486 Cell Wall Hydrolase N7988_18865 PF00884 Sulfatase N7988_18870 PF00350 Dynamin family N7988_18880 PF01119 DNA mismatch repair protein, C-terminal domain N7988_18880 PF08676 MutL C terminal dimerisation domain N7988_18885 PF01624 MutS domain I N7988_18885 PF00488 MutS domain V N7988_18885 PF05190 MutS family domain IV N7988_18885 PF05192 MutS domain III N7988_18885 PF05188 MutS domain II N7988_18890 PF10628 Outer spore coat protein E (CotE) N7988_18895 PF06133 Control of competence regulator ComK, YlbF/YmcA N7988_18900 PF04055 Radical SAM superfamily N7988_18900 PF01938 TRAM domain N7988_18900 PF00919 Uncharacterized protein family UPF0004 N7988_18905 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain N7988_18910 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase N7988_18910 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg N7988_18910 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II N7988_18915 PF01244 Membrane dipeptidase (Peptidase family M19) N7988_18920 PF04232 Stage V sporulation protein S (SpoVS) N7988_18925 PF13277 YmdB-like protein N7988_18930 PF01966 HD domain N7988_18930 PF00013 KH domain N7988_18930 PF12072 Domain of unknown function (DUF3552) N7988_18950 PF02464 Competence-damaged protein N7988_18950 PF00994 Probable molybdopterin binding domain N7988_18950 PF18146 Damage-inducible protein CinA KH domain N7988_18955 PF01066 CDP-alcohol phosphatidyltransferase N7988_18960 PF13464 Domain of unknown function (DUF4115) N7988_18965 PF11868 Protein of unknown function (DUF3388) N7988_18970 PF11588 Protein of unknown function (DUF3243) N7988_18980 PF05193 Peptidase M16 inactive domain N7988_18980 PF00675 Insulinase (Peptidase family M16) N7988_18985 PF05193 Peptidase M16 inactive domain N7988_18990 PF02653 Branched-chain amino acid transport system / permease component N7988_18995 PF02653 Branched-chain amino acid transport system / permease component N7988_19000 PF00005 ABC transporter N7988_19005 PF02608 ABC transporter substrate-binding protein PnrA-like N7988_19010 PF00392 Bacterial regulatory proteins, gntR family N7988_19010 PF07702 UTRA domain N7988_19015 PF01580 FtsK/SpoIIIE family N7988_19015 PF09397 Ftsk gamma domain N7988_19015 PF17854 FtsK alpha domain N7988_19020 PF14035 YlzJ-like protein N7988_19025 PF00574 Clp protease N7988_19030 PF17770 Ribonuclease J C-terminal domain N7988_19030 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain N7988_19030 PF00753 Metallo-beta-lactamase superfamily N7988_19035 PF00701 Dihydrodipicolinate synthetase family N7988_19040 PF13840 ACT domain N7988_19040 PF00696 Amino acid kinase family N7988_19045 PF02774 Semialdehyde dehydrogenase, dimerisation domain N7988_19045 PF01118 Semialdehyde dehydrogenase, NAD binding domain N7988_19050 PF02441 Flavoprotein N7988_19055 PF01262 Alanine dehydrogenase/PNT, C-terminal domain N7988_19055 PF16924 Dipicolinate synthase subunit A N-terminal domain N7988_19060 PF05239 PRC-barrel domain N7988_19065 PF00675 Insulinase (Peptidase family M16) N7988_19065 PF05193 Peptidase M16 inactive domain N7988_19070 PF01522 Polysaccharide deacetylase N7988_19075 PF00013 KH domain N7988_19075 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain N7988_19075 PF01138 3' exoribonuclease family, domain 1 N7988_19075 PF03725 3' exoribonuclease family, domain 2 N7988_19075 PF00575 S1 RNA binding domain N7988_19080 PF00312 Ribosomal protein S15 N7988_19085 PF06574 FAD synthetase N7988_19085 PF01687 Riboflavin kinase N7988_19090 PF01509 TruB family pseudouridylate synthase (N terminal domain) N7988_19090 PF16198 tRNA pseudouridylate synthase B C-terminal domain N7988_19095 PF02033 Ribosome-binding factor A N7988_19100 PF04456 Protein of unknown function (DUF503) N7988_19105 PF11987 Translation-initiation factor 2 N7988_19105 PF00009 Elongation factor Tu GTP binding domain N7988_19105 PF04760 Translation initiation factor IF-2, N-terminal region N7988_19110 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family N7988_19115 PF04296 Protein of unknown function (DUF448) N7988_19120 PF13184 NusA-like KH domain N7988_19120 PF08529 NusA N-terminal domain N7988_19120 PF00575 S1 RNA binding domain N7988_19125 PF17384 RimP C-terminal SH3 domain N7988_19125 PF02576 RimP N-terminal domain N7988_19130 PF17657 Bacterial DNA polymerase III alpha subunit finger domain N7988_19130 PF14579 Helix-hairpin-helix motif N7988_19130 PF02811 PHP domain N7988_19130 PF00929 Exonuclease N7988_19130 PF11490 DNA polymerase III polC-type N-terminus II N7988_19130 PF07733 Bacterial DNA polymerase III alpha NTPase domain N7988_19130 PF14480 DNA polymerase III polC-type N-terminus I N7988_19135 PF03129 Anticodon binding domain N7988_19135 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) N7988_19135 PF04073 Aminoacyl-tRNA editing domain N7988_19140 PF17820 PDZ domain N7988_19140 PF02163 Peptidase family M50 N7988_19145 PF13288 DXP reductoisomerase C-terminal domain N7988_19145 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain N7988_19145 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase N7988_19155 PF01255 Putative undecaprenyl diphosphate synthase N7988_19160 PF01765 Ribosome recycling factor N7988_19165 PF00696 Amino acid kinase family N7988_19170 PF00889 Elongation factor TS N7988_19175 PF00318 Ribosomal protein S2 N7988_19180 PF06018 CodY GAF-like domain N7988_19180 PF08222 CodY helix-turn-helix domain N7988_19185 PF00004 ATPase family associated with various cellular activities (AAA) N7988_19185 PF07724 AAA domain (Cdc48 subfamily) N7988_19185 PF10431 C-terminal, D2-small domain, of ClpB protein N7988_19190 PF00227 Proteasome subunit N7988_19195 PF02899 Phage integrase, N-terminal SAM-like domain N7988_19195 PF00589 Phage integrase family N7988_19200 PF01134 Glucose inhibited division protein A N7988_19205 PF01131 DNA topoisomerase N7988_19205 PF01751 Toprim domain N7988_19205 PF01396 Topoisomerase DNA binding C4 zinc finger N7988_19210 PF02481 DNA recombination-mediator protein A N7988_19215 PF02629 CoA binding domain N7988_19215 PF00549 CoA-ligase N7988_19220 PF00549 CoA-ligase N7988_19220 PF08442 ATP-grasp domain N7988_19225 PF01351 Ribonuclease HII N7988_19230 PF01926 50S ribosome-binding GTPase N7988_19235 PF10502 Signal peptidase, peptidase S26 N7988_19240 PF01245 Ribosomal protein L19 N7988_19245 PF01746 tRNA (Guanine-1)-methyltransferase N7988_19250 PF05239 PRC-barrel domain N7988_19250 PF01782 RimM N-terminal domain N7988_19260 PF00886 Ribosomal protein S16 N7988_19265 PF02978 Signal peptide binding domain N7988_19265 PF00448 SRP54-type protein, GTPase domain N7988_19265 PF02881 SRP54-type protein, helical bundle domain N7988_19270 PF04297 Putative helix-turn-helix protein, YlxM / p13 like N7988_19275 PF00448 SRP54-type protein, GTPase domain N7988_19275 PF02881 SRP54-type protein, helical bundle domain N7988_19280 PF06470 SMC proteins Flexible Hinge Domain N7988_19280 PF02463 RecF/RecN/SMC N terminal domain N7988_19285 PF00035 Double-stranded RNA binding motif N7988_19285 PF14622 Ribonuclease-III-like N7988_19290 PF00550 Phosphopantetheine attachment site N7988_19300 PF00698 Acyl transferase domain N7988_19305 PF02504 Fatty acid synthesis protein N7988_19310 PF03061 Thioesterase superfamily N7988_19315 PF17191 RecG wedge domain N7988_19315 PF00270 DEAD/DEAH box helicase N7988_19315 PF00271 Helicase conserved C-terminal domain N7988_19320 PF13684 Dihydroxyacetone kinase family N7988_19320 PF02734 DAK2 domain N7988_19325 PF03780 Asp23 family, cell envelope-related function N7988_19330 PF00830 Ribosomal L28 family N7988_19335 PF08183 Stage V sporulation protein family N7988_19340 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain N7988_19340 PF04263 Thiamin pyrophosphokinase, catalytic domain N7988_19345 PF00834 Ribulose-phosphate 3 epimerase family N7988_19350 PF16745 RsgA N-terminal domain N7988_19350 PF03193 RsgA GTPase N7988_19355 PF00069 Protein kinase domain N7988_19355 PF03793 PASTA domain N7988_19365 PF04055 Radical SAM superfamily N7988_19370 PF01189 16S rRNA methyltransferase RsmB/F N7988_19370 PF01029 NusB family N7988_19375 PF00551 Formyl transferase N7988_19375 PF02911 Formyl transferase, C-terminal domain N7988_19380 PF01327 Polypeptide deformylase N7988_19385 PF18074 Primosomal protein N C-terminal domain N7988_19385 PF17764 3′ DNA-binding domain (3′BD) N7988_19385 PF00271 Helicase conserved C-terminal domain N7988_19385 PF18319 PriA DNA helicase Cys-rich region (CRR) domain N7988_19385 PF04851 Type III restriction enzyme, res subunit N7988_19390 PF04127 DNA / pantothenate metabolism flavoprotein N7988_19390 PF02441 Flavoprotein N7988_19395 PF01192 RNA polymerase Rpb6 N7988_19400 PF00625 Guanylate kinase N7988_19405 PF04025 Domain of unknown function (DUF370) N7988_19410 PF03755 YicC-like family, N-terminal region N7988_19410 PF08340 Domain of unknown function (DUF1732) N7988_19415 PF00690 Cation transporter/ATPase, N-terminus N7988_19415 PF00689 Cation transporting ATPase, C-terminus N7988_19420 PF05670 NFACT protein RNA binding domain N7988_19430 PF01321 Creatinase/Prolidase N-terminal domain N7988_19430 PF00557 Metallopeptidase family M24 N7988_19455 PF13419 Haloacid dehalogenase-like hydrolase N7988_19460 PF00156 Phosphoribosyl transferase domain N7988_19465 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family N7988_19470 PF01180 Dihydroorotate dehydrogenase N7988_19475 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B N7988_19480 PF02142 MGS-like domain N7988_19480 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain N7988_19480 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain N7988_19485 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain N7988_19485 PF00117 Glutamine amidotransferase class-I N7988_19490 PF01979 Amidohydrolase family N7988_19495 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain N7988_19495 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain N7988_19500 PF00860 Permease family N7988_19505 PF00156 Phosphoribosyl transferase domain N7988_19510 PF00849 RNA pseudouridylate synthase N7988_19510 PF01479 S4 domain N7988_19515 PF01252 Signal peptidase (SPase) II N7988_19525 PF08264 Anticodon-binding domain of tRNA N7988_19525 PF00133 tRNA synthetases class I (I, L, M and V) N7988_19525 PF06827 Zinc finger found in FPG and IleRS N7988_19530 PF05103 DivIVA protein N7988_19535 PF01479 S4 domain N7988_19535 PF17774 Putative RNA-binding domain in YlmH N7988_19540 PF02325 YGGT family N7988_19545 PF04472 Cell division protein SepF N7988_19550 PF01168 Alanine racemase, N-terminal domain N7988_19555 PF02578 Multi-copper polyphenol oxidoreductase laccase N7988_19560 PF05239 PRC-barrel domain N7988_19565 PF04542 Sigma-70 region 2 N7988_19565 PF04539 Sigma-70 region 3 N7988_19565 PF04545 Sigma-70, region 4 N7988_19575 PF04542 Sigma-70 region 2 N7988_19575 PF04545 Sigma-70, region 4 N7988_19580 PF03419 Sporulation factor SpoIIGA N7988_19585 PF12327 FtsZ family, C-terminal domain N7988_19585 PF00091 Tubulin/FtsZ family, GTPase domain N7988_19590 PF02491 SHS2 domain inserted in FTSA N7988_19595 PF08478 POTRA domain, FtsQ-type N7988_19595 PF03799 Cell division protein FtsQ N7988_19600 PF01565 FAD binding domain N7988_19600 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain N7988_19605 PF04101 Glycosyltransferase family 28 C-terminal domain N7988_19605 PF03033 Glycosyltransferase family 28 N-terminal domain N7988_19610 PF01098 Cell cycle protein N7988_19615 PF02875 Mur ligase family, glutamate ligase domain N7988_19615 PF08245 Mur ligase middle domain N7988_19620 PF00953 Glycosyl transferase family 4 N7988_19620 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 N7988_19625 PF01225 Mur ligase family, catalytic domain N7988_19625 PF02875 Mur ligase family, glutamate ligase domain N7988_19625 PF08245 Mur ligase middle domain N7988_19630 PF00905 Penicillin binding protein transpeptidase domain N7988_19630 PF03717 Penicillin-binding Protein dimerisation domain N7988_19630 PF03793 PASTA domain N7988_19635 PF03793 PASTA domain N7988_19635 PF03717 Penicillin-binding Protein dimerisation domain N7988_19635 PF00905 Penicillin binding protein transpeptidase domain N7988_19640 PF04977 Septum formation initiator N7988_19645 PF01795 MraW methylase family N7988_19650 PF10079 Bacillithiol biosynthesis BshC N7988_19655 PF02558 Ketopantoate reductase PanE/ApbA N7988_19655 PF08546 Ketopantoate reductase PanE/ApbA C terminal N7988_19660 PF00583 Acetyltransferase (GNAT) family N7988_19670 PF01783 Ribosomal L32p protein family N7988_19675 PF02620 Large ribosomal RNA subunit accumulation protein YceD N7988_19680 PF05636 HIGH Nucleotidyl Transferase N7988_19685 PF05362 Lon protease (S16) C-terminal proteolytic domain N7988_19685 PF13180 PDZ domain N7988_19690 PF01734 Patatin-like phospholipase N7988_19695 PF07670 Nucleoside recognition N7988_19700 PF01467 Cytidylyltransferase-like N7988_19715 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) N7988_19720 PF06133 Control of competence regulator ComK, YlbF/YmcA N7988_19725 PF00300 Histidine phosphatase superfamily (branch 1) N7988_19730 PF14003 YlbE-like protein N7988_19735 PF14071 Putative coat protein N7988_19740 PF00188 Cysteine-rich secretory protein family N7988_19740 PF14504 CAP-associated N-terminal N7988_19745 PF08868 YugN-like family N7988_19750 PF00795 Carbon-nitrogen hydrolase N7988_19755 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) N7988_19760 PF03626 Prokaryotic Cytochrome C oxidase subunit IV N7988_19765 PF00510 Cytochrome c oxidase subunit III N7988_19770 PF00115 Cytochrome C and Quinol oxidase polypeptide I N7988_19775 PF00034 Cytochrome c N7988_19775 PF00116 Cytochrome C oxidase subunit II, periplasmic domain N7988_19775 PF02790 Cytochrome C oxidase subunit II, transmembrane domain N7988_19780 PF01040 UbiA prenyltransferase family N7988_19785 PF02628 Cytochrome oxidase assembly protein N7988_19790 PF02785 Biotin carboxylase C-terminal domain N7988_19790 PF00289 Biotin carboxylase, N-terminal domain N7988_19790 PF00364 Biotin-requiring enzyme N7988_19790 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain N7988_19790 PF00682 HMGL-like N7988_19790 PF02436 Conserved carboxylase domain N7988_19795 PF01098 Cell cycle protein N7988_19800 PF07408 Protein of unknown function (DUF1507) N7988_19810 PF02562 PhoH-like protein N7988_19810 PF13638 PIN domain N7988_19820 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) N7988_19830 PF14036 YlaH-like protein N7988_19835 PF00679 Elongation factor G C-terminus N7988_19835 PF03144 Elongation factor Tu domain 2 N7988_19835 PF00009 Elongation factor Tu GTP binding domain N7988_19835 PF14492 Elongation Factor G, domain II N7988_19845 PF00459 Inositol monophosphatase family N7988_19855 PF06335 Protein of unknown function (DUF1054) N7988_19860 PF05256 Uncharacterised protein family (UPF0223) N7988_19865 PF01276 Orn/Lys/Arg decarboxylase, major domain N7988_19865 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain N7988_19905 PF07992 Pyridine nucleotide-disulphide oxidoreductase N7988_19905 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain N7988_19910 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) N7988_19910 PF00364 Biotin-requiring enzyme N7988_19910 PF02817 e3 binding domain N7988_19915 PF02779 Transketolase, pyrimidine binding domain N7988_19915 PF02780 Transketolase, C-terminal domain N7988_19920 PF00676 Dehydrogenase E1 component N7988_19930 PF01327 Polypeptide deformylase N7988_19940 PF07288 Protein of unknown function (DUF1447) N7988_19945 PF17770 Ribonuclease J C-terminal domain N7988_19945 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain N7988_19945 PF00753 Metallo-beta-lactamase superfamily N7988_19950 PF02254 TrkA-N domain N7988_19950 PF02080 TrkA-C domain N7988_19960 PF07687 Peptidase dimerisation domain N7988_19960 PF01546 Peptidase family M20/M25/M40 N7988_19965 PF14602 Hexapeptide repeat of succinyl-transferase N7988_19965 PF00132 Bacterial transferase hexapeptide (six repeats) N7988_19965 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal N7988_19970 PF03466 LysR substrate binding domain N7988_19970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N7988_19985 PF04308 Ribonuclease H-like N7988_19995 PF08796 Protein of unknown function (DUF1797) N7988_20010 PF10388 EAL-domain associated signalling protein domain N7988_20010 PF00563 EAL domain N7988_20020 PF00149 Calcineurin-like phosphoesterase N7988_20020 PF10518 TAT (twin-arginine translocation) pathway signal sequence N7988_20030 PF02503 Polyphosphate kinase middle domain N7988_20030 PF13090 Polyphosphate kinase C-terminal domain 2 N7988_20030 PF17941 Polyphosphate kinase C-terminal domain 1 N7988_20030 PF13089 Polyphosphate kinase N-terminal domain N7988_20035 PF02541 Ppx/GppA phosphatase family N7988_20040 PF14177 YkyB-like protein N7988_20065 PF07690 Major Facilitator Superfamily N7988_20075 PF08267 Cobalamin-independent synthase, N-terminal domain N7988_20075 PF01717 Cobalamin-independent synthase, Catalytic domain N7988_20085 PF14040 Deoxyribonuclease NucA/NucB N7988_20095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N7988_20095 PF00512 His Kinase A (phospho-acceptor) domain N7988_20105 PF00155 Aminotransferase class I and II N7988_20110 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family N7988_20110 PF00356 Bacterial regulatory proteins, lacI family N7988_20115 PF00528 Binding-protein-dependent transport system inner membrane component N7988_20120 PF00528 Binding-protein-dependent transport system inner membrane component N7988_20125 PF13416 Bacterial extracellular solute-binding protein N7988_20130 PF00128 Alpha amylase, catalytic domain N7988_20130 PF02903 Alpha amylase, N-terminal ig-like domain N7988_20130 PF16657 Maltogenic Amylase, C-terminal domain N7988_20135 PF00128 Alpha amylase, catalytic domain N7988_20135 PF16657 Maltogenic Amylase, C-terminal domain N7988_20140 PF17912 MalK OB fold domain N7988_20140 PF00005 ABC transporter N7988_20140 PF03459 TOBE domain N7988_20180 PF02803 Thiolase, C-terminal domain N7988_20180 PF00108 Thiolase, N-terminal domain N7988_20185 PF00293 NUDIX domain N7988_20215 PF03551 Transcriptional regulator PadR-like family N7988_20230 PF01008 Initiation factor 2 subunit family N7988_20235 PF01636 Phosphotransferase enzyme family N7988_20240 PF00795 Carbon-nitrogen hydrolase N7988_20245 PF00155 Aminotransferase class I and II N7988_20250 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain N7988_20250 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain N7988_20260 PF00596 Class II Aldolase and Adducin N-terminal domain N7988_20265 PF03079 ARD/ARD' family N7988_20280 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase N7988_20280 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase N7988_20285 PF00144 Beta-lactamase N7988_20290 PF00990 Diguanylate cyclase, GGDEF domain N7988_20290 PF08448 PAS fold N7988_20295 PF00881 Nitroreductase family N7988_20310 PF05524 PEP-utilising enzyme, N-terminal N7988_20310 PF00391 PEP-utilising enzyme, mobile domain N7988_20310 PF02896 PEP-utilising enzyme, TIM barrel domain N7988_20315 PF00381 PTS HPr component phosphorylation site N7988_20320 PF02378 Phosphotransferase system, EIIC N7988_20320 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 N7988_20320 PF00367 phosphotransferase system, EIIB N7988_20325 PF03123 CAT RNA binding domain N7988_20325 PF00874 PRD domain N7988_20335 PF07702 UTRA domain N7988_20335 PF00392 Bacterial regulatory proteins, gntR family N7988_20340 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase N7988_20345 PF01979 Amidohydrolase family N7988_20355 PF04079 Segregation and condensation complex subunit ScpB N7988_20360 PF02616 Segregation and condensation protein ScpA N7988_20370 PF03745 Domain of unknown function (DUF309) N7988_20375 PF00583 Acetyltransferase (GNAT) family N7988_20380 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD N7988_20385 PF06207 Protein of unknown function (DUF1002) N7988_20395 PF03323 Bacillus/Clostridium GerA spore germination protein N7988_20400 PF14097 Stage V sporulation protein AE1 N7988_20405 PF03862 SpoVAC/SpoVAEB sporulation membrane protein N7988_20410 PF07451 Stage V sporulation protein AD (SpoVAD) N7988_20415 PF03862 SpoVAC/SpoVAEB sporulation membrane protein N7988_20420 PF13782 Stage V sporulation protein AB N7988_20425 PF12164 Stage V sporulation protein AA N7988_20435 PF00209 Sodium:neurotransmitter symporter family N7988_20440 PF04539 Sigma-70 region 3 N7988_20440 PF04542 Sigma-70 region 2 N7988_20440 PF04545 Sigma-70, region 4 N7988_20445 PF13581 Histidine kinase-like ATPase domain N7988_20450 PF01740 STAS domain N7988_20455 PF00768 D-alanyl-D-alanine carboxypeptidase N7988_20455 PF07943 Penicillin-binding protein 5, C-terminal domain N7988_20460 PF00392 Bacterial regulatory proteins, gntR family N7988_20465 PF00005 ABC transporter N7988_20485 PF01047 MarR family N7988_20495 PF00860 Permease family N7988_20500 PF01544 CorA-like Mg2+ transporter protein N7988_20505 PF02885 Glycosyl transferase family, helical bundle domain N7988_20505 PF00591 Glycosyl transferase family, a/b domain N7988_20505 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain N7988_20510 PF01048 Phosphorylase superfamily N7988_20515 PF01676 Metalloenzyme superfamily N7988_20520 PF13115 YtkA-like N7988_20525 PF02899 Phage integrase, N-terminal SAM-like domain N7988_20525 PF00589 Phage integrase family N7988_20530 PF14004 Protein of unknown function (DUF4227) N7988_20535 PF01475 Ferric uptake regulator family N7988_20540 PF01944 Stage II sporulation protein M N7988_20550 PF00293 NUDIX domain N7988_20555 PF13072 Mother cell inhibitor of FtsZ N7988_20560 PF00248 Aldo/keto reductase family N7988_20565 PF00248 Aldo/keto reductase family N7988_20570 PF13673 Acetyltransferase (GNAT) domain N7988_20570 PF04229 GrpB protein N7988_20580 PF02872 5'-nucleotidase, C-terminal domain N7988_20580 PF00746 LPXTG cell wall anchor motif N7988_20580 PF00149 Calcineurin-like phosphoesterase N7988_20580 PF00565 Staphylococcal nuclease homologue N7988_20590 PF12146 Serine aminopeptidase, S33 N7988_20595 PF13726 Na+-H+ antiporter family N7988_20595 PF03553 Na+/H+ antiporter family N7988_20600 PF00356 Bacterial regulatory proteins, lacI family N7988_20605 PF00583 Acetyltransferase (GNAT) family N7988_20610 PF12146 Serine aminopeptidase, S33 N7988_20615 PF10827 Protein of unknown function (DUF2552) N7988_20625 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region N7988_20625 PF01872 RibD C-terminal domain N7988_20630 PF00677 Lumazine binding domain N7988_20635 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase N7988_20635 PF00925 GTP cyclohydrolase II N7988_20640 PF00885 6,7-dimethyl-8-ribityllumazine synthase N7988_20650 PF06968 Biotin and Thiamin Synthesis associated domain N7988_20650 PF04055 Radical SAM superfamily N7988_20655 PF13847 Methyltransferase domain N7988_20660 PF12697 Alpha/beta hydrolase family N7988_20660 PF08241 Methyltransferase domain N7988_20665 PF00155 Aminotransferase class I and II N7988_20675 PF00202 Aminotransferase class-III N7988_20685 PF03553 Na+/H+ antiporter family N7988_20690 PF00149 Calcineurin-like phosphoesterase N7988_20690 PF02872 5'-nucleotidase, C-terminal domain N7988_20700 PF13404 AsnC-type helix-turn-helix domain N7988_20700 PF01037 Lrp/AsnC ligand binding domain N7988_20715 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain N7988_20715 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain N7988_20720 PF00202 Aminotransferase class-III N7988_20725 PF00696 Amino acid kinase family N7988_20730 PF01960 ArgJ family N7988_20735 PF01118 Semialdehyde dehydrogenase, NAD binding domain N7988_20735 PF02774 Semialdehyde dehydrogenase, dimerisation domain N7988_20745 PF00106 short chain dehydrogenase N7988_20750 PF00753 Metallo-beta-lactamase superfamily N7988_20755 PF03807 NADP oxidoreductase coenzyme F420-dependent N7988_20755 PF14748 Pyrroline-5-carboxylate reductase dimerisation N7988_20760 PF03313 Serine dehydratase alpha chain N7988_20765 PF01842 ACT domain N7988_20765 PF03315 Serine dehydratase beta chain N7988_20775 PF00753 Metallo-beta-lactamase superfamily N7988_20775 PF12706 Beta-lactamase superfamily domain N7988_20790 PF00689 Cation transporting ATPase, C-terminus N7988_20790 PF00690 Cation transporter/ATPase, N-terminus N7988_20800 PF11799 impB/mucB/samB family C-terminal domain N7988_20800 PF11798 IMS family HHH motif N7988_20800 PF00817 impB/mucB/samB family N7988_20805 PF07687 Peptidase dimerisation domain N7988_20805 PF01546 Peptidase family M20/M25/M40 N7988_20810 PF13302 Acetyltransferase (GNAT) domain N7988_20825 PF03734 L,D-transpeptidase catalytic domain N7988_20830 PF11728 Putative aromatic acid exporter C-terminal domain N7988_20830 PF06081 Aromatic acid exporter family member 1 N7988_20835 PF00005 ABC transporter N7988_20840 PF00528 Binding-protein-dependent transport system inner membrane component N7988_20845 PF00497 Bacterial extracellular solute-binding proteins, family 3 N7988_20850 PF06491 Disulphide isomerase N7988_20855 PF11208 Protein of unknown function (DUF2992) N7988_20860 PF09297 NADH pyrophosphatase zinc ribbon domain N7988_20860 PF00293 NUDIX domain N7988_20865 PF04239 Protein of unknown function (DUF421) N7988_20870 PF01098 Cell cycle protein N7988_20875 PF02817 e3 binding domain N7988_20875 PF00364 Biotin-requiring enzyme N7988_20875 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) N7988_20880 PF02780 Transketolase, C-terminal domain N7988_20880 PF02779 Transketolase, pyrimidine binding domain N7988_20885 PF00676 Dehydrogenase E1 component N7988_20890 PF07992 Pyridine nucleotide-disulphide oxidoreductase N7988_20890 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain N7988_20895 PF00871 Acetokinase family N7988_20900 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase N7988_20900 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain N7988_20905 PF01515 Phosphate acetyl/butaryl transferase N7988_20910 PF02954 Bacterial regulatory protein, Fis family N7988_20910 PF00989 PAS fold N7988_20910 PF00158 Sigma-54 interaction domain N7988_20920 PF03009 Glycerophosphoryl diester phosphodiesterase family N7988_20925 PF14174 YycC-like protein N7988_20935 PF08769 Sporulation initiation factor Spo0A C terminal N7988_20935 PF00072 Response regulator receiver domain N7988_20940 PF05580 SpoIVB peptidase S55 N7988_20940 PF17820 PDZ domain N7988_20945 PF13476 AAA domain N7988_20950 PF01316 Arginine repressor, DNA binding domain N7988_20950 PF02863 Arginine repressor, C-terminal domain N7988_20955 PF01728 FtsJ-like methyltransferase N7988_20955 PF01479 S4 domain N7988_20960 PF13292 1-deoxy-D-xylulose-5-phosphate synthase N7988_20960 PF02780 Transketolase, C-terminal domain N7988_20960 PF02779 Transketolase, pyrimidine binding domain N7988_20965 PF00348 Polyprenyl synthetase N7988_20970 PF02609 Exonuclease VII small subunit N7988_20975 PF02601 Exonuclease VII, large subunit N7988_20975 PF13742 OB-fold nucleic acid binding domain N7988_20980 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain N7988_20980 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain N7988_20985 PF01029 NusB family N7988_20990 PF03780 Asp23 family, cell envelope-related function N7988_20995 PF02785 Biotin carboxylase C-terminal domain N7988_20995 PF00289 Biotin carboxylase, N-terminal domain N7988_20995 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain N7988_21000 PF00364 Biotin-requiring enzyme N7988_21010 PF12685 SpoIIIAH-like protein N7988_21020 PF09581 Stage III sporulation protein AF (Spore_III_AF) N7988_21025 PF09546 Stage III sporulation protein AE (spore_III_AE) N7988_21030 PF06686 Stage III sporulation protein AC/AD protein family N7988_21035 PF06686 Stage III sporulation protein AC/AD protein family N7988_21040 PF09548 Stage III sporulation protein AB (spore_III_AB) N7988_21065 PF01132 Elongation factor P (EF-P) OB domain N7988_21065 PF08207 Elongation factor P (EF-P) KOW-like domain N7988_21065 PF09285 Elongation factor P, C-terminal N7988_21070 PF01321 Creatinase/Prolidase N-terminal domain N7988_21070 PF00557 Metallopeptidase family M24 N7988_21075 PF01220 Dehydroquinase class II N7988_21080 PF11085 Conserved membrane protein YqhR N7988_21085 PF07136 Protein of unknown function (DUF1385) N7988_21095 PF13419 Haloacid dehalogenase-like hydrolase N7988_21100 PF01325 Iron dependent repressor, N-terminal DNA binding domain N7988_21100 PF02742 Iron dependent repressor, metal binding and dimerisation domain N7988_21125 PF03099 Biotin/lipoate A/B protein ligase family N7988_21130 PF00581 Rhodanese-like domain N7988_21140 PF00356 Bacterial regulatory proteins, lacI family N7988_21140 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family N7988_21150 PF00893 Small Multidrug Resistance protein N7988_21155 PF00893 Small Multidrug Resistance protein N7988_21185 PF00005 ABC transporter N7988_21190 PF00392 Bacterial regulatory proteins, gntR family N7988_21205 PF02347 Glycine cleavage system P-protein N7988_21210 PF02347 Glycine cleavage system P-protein N7988_21215 PF08669 Glycine cleavage T-protein C-terminal barrel domain N7988_21215 PF01571 Aminomethyltransferase folate-binding domain N7988_21220 PF00176 SNF2 family N-terminal domain N7988_21220 PF00271 Helicase conserved C-terminal domain N7988_21225 PF11079 Bacterial protein YqhG of unknown function N7988_21250 PF14038 YqzE-like protein N7988_21255 PF01202 Shikimate kinase N7988_21290 PF00482 Type II secretion system (T2SS), protein F N7988_21295 PF00437 Type II/IV secretion system protein N7988_21305 PF11117 Protein of unknown function (DUF2626) N7988_21310 PF00375 Sodium:dicarboxylate symporter family N7988_21345 PF03033 Glycosyltransferase family 28 N-terminal domain N7988_21345 PF04101 Glycosyltransferase family 28 C-terminal domain N7988_21350 PF02310 B12 binding domain N7988_21350 PF02607 B12 binding domain N7988_21350 PF02965 Vitamin B12 dependent methionine synthase, activation domain N7988_21350 PF00809 Pterin binding enzyme N7988_21350 PF02574 Homocysteine S-methyltransferase N7988_21355 PF02574 Homocysteine S-methyltransferase N7988_21355 PF02219 Methylenetetrahydrofolate reductase N7988_21360 PF01053 Cys/Met metabolism PLP-dependent enzyme N7988_21365 PF01053 Cys/Met metabolism PLP-dependent enzyme N7988_21375 PF01022 Bacterial regulatory protein, arsR family N7988_21385 PF00753 Metallo-beta-lactamase superfamily N7988_21390 PF10958 Protein of unknown function (DUF2759) N7988_21395 PF00480 ROK family N7988_21400 PF06014 Bacterial protein of unknown function (DUF910) N7988_21405 PF01812 5-formyltetrahydrofolate cyclo-ligase family N7988_21410 PF00471 Ribosomal protein L33 N7988_21415 PF00483 Nucleotidyl transferase N7988_21420 PF01895 PhoU domain N7988_21425 PF00005 ABC transporter N7988_21430 PF00528 Binding-protein-dependent transport system inner membrane component N7988_21435 PF00528 Binding-protein-dependent transport system inner membrane component N7988_21440 PF12849 PBP superfamily domain N7988_21445 PF03717 Penicillin-binding Protein dimerisation domain N7988_21445 PF00905 Penicillin binding protein transpeptidase domain N7988_21450 PF07690 Major Facilitator Superfamily N7988_21455 PF02777 Iron/manganese superoxide dismutases, C-terminal domain N7988_21455 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain N7988_21465 PF06691 Protein of unknown function (DUF1189) N7988_21475 PF04551 GcpE protein N7988_21480 PF01475 Ferric uptake regulator family N7988_21485 PF00950 ABC 3 transport family N7988_21490 PF00005 ABC transporter N7988_21495 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 N7988_21495 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) N7988_21500 PF11116 Protein of unknown function (DUF2624) N7988_21505 PF01261 Xylose isomerase-like TIM barrel N7988_21510 PF00271 Helicase conserved C-terminal domain N7988_21510 PF00270 DEAD/DEAH box helicase N7988_21520 PF02401 LytB protein N7988_21525 PF01784 NIF3 (NGG1p interacting factor 3) N7988_21530 PF04816 tRNA (adenine(22)-N(1))-methyltransferase N7988_21535 PF13442 Cytochrome C oxidase, cbb3-type, subunit III N7988_21540 PF04542 Sigma-70 region 2 N7988_21540 PF03979 Sigma-70 factor, region 1.1 N7988_21540 PF00140 Sigma-70 factor, region 1.2 N7988_21540 PF04539 Sigma-70 region 3 N7988_21540 PF04545 Sigma-70, region 4 N7988_21545 PF10410 DnaB-helicase binding domain of primase N7988_21545 PF01807 CHC2 zinc finger N7988_21545 PF08275 DNA primase catalytic core, N-terminal domain N7988_21555 PF03618 Kinase/pyrophosphorylase N7988_21560 PF00571 CBS domain N7988_21560 PF08279 HTH domain N7988_21565 PF02565 Recombination protein O C terminal N7988_21565 PF11967 Recombination protein O N terminal N7988_21575 PF07650 KH domain N7988_21575 PF01926 50S ribosome-binding GTPase N7988_21580 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region N7988_21585 PF01219 Prokaryotic diacylglycerol kinase N7988_21590 PF02130 Uncharacterized protein family UPF0054 N7988_21595 PF07698 7TM receptor with intracellular HD hydrolase N7988_21595 PF07697 7TM-HD extracellular N7988_21595 PF01966 HD domain N7988_21600 PF02562 PhoH-like protein N7988_21605 PF06898 Putative stage IV sporulation protein YqfD N7988_21610 PF07873 YabP family N7988_21615 PF09424 Yqey-like protein N7988_21620 PF01165 Ribosomal protein S21 N7988_21625 PF00919 Uncharacterized protein family UPF0004 N7988_21625 PF01938 TRAM domain N7988_21625 PF04055 Radical SAM superfamily N7988_21630 PF04452 RNA methyltransferase N7988_21640 PF00226 DnaJ domain N7988_21640 PF00684 DnaJ central domain N7988_21640 PF01556 DnaJ C terminal domain N7988_21645 PF00012 Hsp70 protein N7988_21650 PF01025 GrpE N7988_21655 PF01628 HrcA protein C terminal domain N7988_21660 PF04055 Radical SAM superfamily N7988_21660 PF06969 HemN C-terminal domain N7988_21665 PF01638 HxlR-like helix-turn-helix N7988_21670 PF03144 Elongation factor Tu domain 2 N7988_21670 PF00679 Elongation factor G C-terminus N7988_21670 PF00009 Elongation factor Tu GTP binding domain N7988_21670 PF06421 GTP-binding protein LepA C-terminus N7988_21680 PF03418 Germination protease N7988_21685 PF01649 Ribosomal protein S20 N7988_21690 PF06144 DNA polymerase III, delta subunit N7988_21695 PF14141 YqzM-like protein N7988_21705 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region N7988_21710 PF10531 SLBB domain N7988_21715 PF03807 NADP oxidoreductase coenzyme F420-dependent N7988_21715 PF14748 Pyrroline-5-carboxylate reductase dimerisation N7988_21720 PF13649 Methyltransferase domain N7988_21730 PF01966 HD domain N7988_21735 PF01467 Cytidylyltransferase-like N7988_21740 PF01985 CRS1 / YhbY (CRM) domain N7988_21745 PF18317 Shikimate 5'-dehydrogenase C-terminal domain N7988_21745 PF08501 Shikimate dehydrogenase substrate binding domain N7988_21745 PF01488 Shikimate / quinate 5-dehydrogenase N7988_21750 PF01926 50S ribosome-binding GTPase N7988_21765 PF02666 Phosphatidylserine decarboxylase N7988_21770 PF04542 Sigma-70 region 2 N7988_21770 PF04545 Sigma-70, region 4 N7988_21780 PF16244 Domain of unknown function (DUF4901) N7988_21785 PF00471 Ribosomal protein L33 N7988_21790 PF00881 Nitroreductase family N7988_21795 PF04607 Region found in RelA / SpoT proteins N7988_21805 PF00245 Alkaline phosphatase N7988_21810 PF00583 Acetyltransferase (GNAT) family N7988_21815 PF08386 TAP-like protein N7988_21815 PF00561 alpha/beta hydrolase fold N7988_21850 PF00082 Subtilase family N7988_21850 PF05922 Peptidase inhibitor I9 N7988_21850 PF13860 FlgD Ig-like domain N7988_21850 PF02225 PA domain N7988_21855 PF00351 Biopterin-dependent aromatic amino acid hydroxylase N7988_21865 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily N7988_21870 PF07681 DoxX N7988_21900 PF00005 ABC transporter N7988_21905 PF01032 FecCD transport family N7988_21910 PF01497 Periplasmic binding protein N7988_21915 PF14143 YrhC-like protein N7988_21920 PF00171 Aldehyde dehydrogenase family N7988_21920 PF00465 Iron-containing alcohol dehydrogenase N7988_21925 PF01053 Cys/Met metabolism PLP-dependent enzyme N7988_21930 PF00291 Pyridoxal-phosphate dependent enzyme N7988_21935 PF01048 Phosphorylase superfamily N7988_21940 PF08241 Methyltransferase domain N7988_21955 PF03717 Penicillin-binding Protein dimerisation domain N7988_21955 PF00905 Penicillin binding protein transpeptidase domain N7988_21965 PF03449 Transcription elongation factor, N-terminal N7988_21965 PF01272 Transcription elongation factor, GreA/GreB, C-term N7988_21970 PF00485 Phosphoribulokinase / Uridine kinase family N7988_21975 PF01136 Peptidase family U32 N7988_21975 PF16325 Peptidase family U32 C-terminal domain N7988_21980 PF01136 Peptidase family U32 N7988_21985 PF01596 O-methyltransferase N7988_21990 PF02618 YceG-like family N7988_21995 PF06949 Protein of unknown function (DUF1292) N7988_22000 PF03652 Holliday junction resolvase N7988_22005 PF06135 IreB regulatory phosphoprotein N7988_22010 PF01411 tRNA synthetases class II (A) N7988_22010 PF02272 DHHA1 domain N7988_22010 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain N7988_22020 PF01594 AI-2E family transporter N7988_22040 PF13538 UvrD-like helicase C-terminal domain N7988_22040 PF14490 Helix-hairpin-helix containing domain N7988_22040 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain N7988_22055 PF00266 Aminotransferase class-V N7988_22060 PF02082 Transcriptional regulator N7988_22065 PF12002 MgsA AAA+ ATPase C terminal N7988_22065 PF05496 Holliday junction DNA helicase RuvB P-loop domain N7988_22065 PF16193 AAA C-terminal domain N7988_22075 PF00899 ThiF family N7988_22080 PF02938 GAD domain N7988_22080 PF01336 OB-fold nucleic acid binding domain N7988_22080 PF00152 tRNA synthetases class II (D, K and N) N7988_22085 PF03129 Anticodon binding domain N7988_22085 PF13393 Histidyl-tRNA synthetase N7988_22095 PF02580 D-Tyr-tRNA(Tyr) deacylase N7988_22100 PF04607 Region found in RelA / SpoT proteins N7988_22100 PF02824 TGS domain N7988_22100 PF13291 ACT domain N7988_22105 PF00156 Phosphoribosyl transferase domain N7988_22110 PF02272 DHHA1 domain N7988_22110 PF10141 Single-strand DNA-specific exonuclease, C terminal domain N7988_22110 PF17768 RecJ OB domain N7988_22110 PF01368 DHH family N7988_22115 PF16916 Dimerisation domain of Zinc Transporter N7988_22115 PF01545 Cation efflux family N7988_22120 PF02355 Protein export membrane protein N7988_22120 PF07549 SecD/SecF GG Motif N7988_22125 PF13797 Post-transcriptional regulator N7988_22130 PF14667 Polysaccharide biosynthesis C-terminal domain N7988_22130 PF01943 Polysaccharide biosynthesis protein N7988_22135 PF04239 Protein of unknown function (DUF421) N7988_22145 PF02699 Preprotein translocase subunit N7988_22150 PF01702 Queuine tRNA-ribosyltransferase N7988_22155 PF02547 Queuosine biosynthesis protein N7988_22160 PF11146 Protein of unknown function (DUF2905) N7988_22165 PF17864 RuvB AAA lid domain N7988_22165 PF05491 RuvB C-terminal winged helix domain N7988_22165 PF05496 Holliday junction DNA helicase RuvB P-loop domain N7988_22170 PF01330 RuvA N terminal domain N7988_22170 PF07499 RuvA, C-terminal domain N7988_22175 PF01497 Periplasmic binding protein N7988_22185 PF00892 EamA-like transporter family N7988_22190 PF01022 Bacterial regulatory protein, arsR family N7988_22205 PF01476 LysM domain N7988_22210 PF02445 Quinolinate synthetase A protein N7988_22215 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain N7988_22215 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain N7988_22220 PF00890 FAD binding domain N7988_22220 PF02910 Fumarate reductase flavoprotein C-term N7988_22225 PF00266 Aminotransferase class-V N7988_22230 PF02829 3H domain N7988_22230 PF08279 HTH domain N7988_22235 PF03475 3-alpha domain N7988_22235 PF03473 MOSC domain N7988_22240 PF01842 ACT domain N7988_22240 PF00800 Prephenate dehydratase N7988_22245 PF02687 FtsX-like permease family N7988_22250 PF02687 FtsX-like permease family N7988_22255 PF00005 ABC transporter N7988_22260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N7988_22265 PF00486 Transcriptional regulatory protein, C terminal N7988_22265 PF00072 Response regulator receiver domain N7988_22270 PF01018 GTP1/OBG N7988_22270 PF09269 Domain of unknown function (DUF1967) N7988_22270 PF01926 50S ribosome-binding GTPase N7988_22275 PF14682 Sporulation initiation phospho-transferase B, C-terminal N7988_22275 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain N7988_22280 PF01016 Ribosomal L27 protein N7988_22285 PF04327 Cysteine protease Prp N7988_22290 PF00829 Ribosomal prokaryotic L21 protein N7988_22295 PF00575 S1 RNA binding domain N7988_22295 PF10150 Ribonuclease E/G family N7988_22300 PF02163 Peptidase family M50 N7988_22305 PF01551 Peptidase family M23 N7988_22310 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain N7988_22315 PF03775 Septum formation inhibitor MinC, C-terminal domain N7988_22325 PF04085 rod shape-determining protein MreC N7988_22335 PF04002 RadC-like JAB domain N7988_22340 PF02545 Maf-like protein N7988_22350 PF08245 Mur ligase middle domain N7988_22350 PF02875 Mur ligase family, glutamate ligase domain N7988_22355 PF08264 Anticodon-binding domain of tRNA N7988_22355 PF00133 tRNA synthetases class I (I, L, M and V) N7988_22355 PF10458 Valyl tRNA synthetase tRNA binding arm N7988_22365 PF01476 LysM domain N7988_22370 PF00202 Aminotransferase class-III N7988_22375 PF00490 Delta-aminolevulinic acid dehydratase N7988_22380 PF02602 Uroporphyrinogen-III synthase HemD N7988_22385 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain N7988_22385 PF03900 Porphobilinogen deaminase, C-terminal domain N7988_22390 PF01578 Cytochrome C assembly protein N7988_22395 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain N7988_22395 PF01488 Shikimate / quinate 5-dehydrogenase N7988_22395 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain N7988_22400 PF01047 MarR family N7988_22405 PF02566 OsmC-like protein N7988_22410 PF01926 50S ribosome-binding GTPase N7988_22415 PF02190 ATP-dependent protease La (LON) substrate-binding domain N7988_22415 PF05362 Lon protease (S16) C-terminal proteolytic domain N7988_22415 PF00004 ATPase family associated with various cellular activities (AAA) N7988_22420 PF05362 Lon protease (S16) C-terminal proteolytic domain N7988_22420 PF00004 ATPase family associated with various cellular activities (AAA) N7988_22425 PF07724 AAA domain (Cdc48 subfamily) N7988_22425 PF06689 ClpX C4-type zinc finger N7988_22425 PF10431 C-terminal, D2-small domain, of ClpB protein N7988_22430 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase N7988_22430 PF05697 Bacterial trigger factor protein (TF) N7988_22430 PF05698 Bacterial trigger factor protein (TF) C-terminus N7988_22445 PF08000 Bacterial PH domain N7988_22445 PF11724 YvbH-like oligomerisation region N7988_22465 PF12850 Calcineurin-like phosphoesterase superfamily domain N7988_22470 PF01725 Ham1 family N7988_22475 PF01138 3' exoribonuclease family, domain 1 N7988_22475 PF03725 3' exoribonuclease family, domain 2 N7988_22480 PF10646 Sporulation and spore germination N7988_22485 PF01177 Asp/Glu/Hydantoin racemase N7988_22495 PF00196 Bacterial regulatory proteins, luxR family N7988_22500 PF00860 Permease family N7988_22505 PF07969 Amidohydrolase family N7988_22510 PF04024 PspC domain N7988_22515 PF01381 Helix-turn-helix N7988_22515 PF07883 Cupin domain N7988_22520 PF13536 Putative multidrug resistance efflux transporter N7988_22525 PF00230 Major intrinsic protein N7988_22530 PF02082 Transcriptional regulator N7988_22540 PF13732 Domain of unknown function (DUF4162) N7988_22540 PF00005 ABC transporter N7988_22545 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) N7988_22550 PF13677 Membrane MotB of proton-channel complex MotA/MotB N7988_22550 PF00691 OmpA family N7988_22555 PF01618 MotA/TolQ/ExbB proton channel family N7988_22560 PF02557 D-alanyl-D-alanine carboxypeptidase N7988_22565 PF03061 Thioesterase superfamily N7988_22570 PF13085 2Fe-2S iron-sulfur cluster binding domain N7988_22570 PF13183 4Fe-4S dicluster domain N7988_22575 PF00890 FAD binding domain N7988_22575 PF02910 Fumarate reductase flavoprotein C-term N7988_22580 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit N7988_22585 PF10702 Protein of unknown function (DUF2507) N7988_22590 PF01541 GIY-YIG catalytic domain N7988_22590 PF02151 UvrB/uvrC motif N7988_22590 PF08459 UvrC Helix-hairpin-helix N-terminal N7988_22595 PF00085 Thioredoxin N7988_22600 PF00766 Electron transfer flavoprotein FAD-binding domain N7988_22600 PF01012 Electron transfer flavoprotein domain N7988_22605 PF01012 Electron transfer flavoprotein domain N7988_22610 PF00378 Enoyl-CoA hydratase/isomerase N7988_22615 PF08359 YsiA-like protein, C-terminal region N7988_22615 PF00440 Bacterial regulatory proteins, tetR family N7988_22620 PF00501 AMP-binding enzyme N7988_22620 PF13193 AMP-binding enzyme C-terminal domain N7988_22640 PF05163 DinB family N7988_22670 PF00005 ABC transporter N7988_22675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N7988_22675 PF00512 His Kinase A (phospho-acceptor) domain N7988_22680 PF00072 Response regulator receiver domain N7988_22680 PF00486 Transcriptional regulatory protein, C terminal N7988_22690 PF09962 Uncharacterized conserved protein (DUF2196) N7988_22695 PF10672 S-adenosylmethionine-dependent methyltransferase N7988_22695 PF17785 PUA-like domain N7988_22700 PF03992 Antibiotic biosynthesis monooxygenase N7988_22705 PF04203 Sortase domain N7988_22710 PF00005 ABC transporter N7988_22715 PF01032 FecCD transport family N7988_22720 PF01497 Periplasmic binding protein N7988_22725 PF05031 Iron Transport-associated domain N7988_22735 PF05031 Iron Transport-associated domain N7988_22740 PF05525 Branched-chain amino acid transport protein N7988_22745 PF01479 S4 domain N7988_22745 PF00849 RNA pseudouridylate synthase N7988_22750 PF01713 Smr domain N7988_22750 PF00488 MutS domain V N7988_22755 PF02811 PHP domain N7988_22755 PF14716 Helix-hairpin-helix domain N7988_22755 PF14791 DNA polymerase beta thumb N7988_22760 PF02674 Colicin V production protein N7988_22765 PF05164 Cell division protein ZapA N7988_22770 PF01351 Ribonuclease HII N7988_22770 PF11858 Domain of unknown function (DUF3378) N7988_22790 PF01336 OB-fold nucleic acid binding domain N7988_22790 PF00152 tRNA synthetases class II (D, K and N) N7988_22795 PF03483 B3/4 domain N7988_22795 PF03484 tRNA synthetase B5 domain N7988_22795 PF03147 Ferredoxin-fold anticodon binding domain N7988_22795 PF01588 Putative tRNA binding domain N7988_22795 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain N7988_22800 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain N7988_22800 PF01409 tRNA synthetases class II core domain (F) N7988_22805 PF00588 SpoU rRNA Methylase family N7988_22805 PF08032 RNA 2'-O ribose methyltransferase substrate binding N7988_22810 PF14098 Small, acid-soluble spore protein I N7988_22815 PF01966 HD domain N7988_22835 PF07690 Major Facilitator Superfamily N7988_22845 PF16859 Tetracyclin repressor-like, C-terminal domain N7988_22845 PF00440 Bacterial regulatory proteins, tetR family N7988_22850 PF05343 M42 glutamyl aminopeptidase N7988_22860 PF00453 Ribosomal protein L20 N7988_22865 PF01632 Ribosomal protein L35 N7988_22870 PF00707 Translation initiation factor IF-3, C-terminal domain N7988_22870 PF05198 Translation initiation factor IF-3, N-terminal domain N7988_22875 PF02824 TGS domain N7988_22875 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) N7988_22875 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain N7988_22875 PF03129 Anticodon binding domain N7988_22880 PF08812 YtxC-like family N7988_22885 PF13783 Domain of unknown function (DUF4177) N7988_22890 PF07319 Primosomal protein DnaI N-terminus N7988_22890 PF01695 IstB-like ATP binding protein N7988_22895 PF07261 Replication initiation and membrane attachment N7988_22900 PF03477 ATP cone domain N7988_22905 PF02675 S-adenosylmethionine decarboxylase N7988_22910 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain N7988_22910 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain N7988_22915 PF01121 Dephospho-CoA kinase N7988_22920 PF02659 Putative manganese efflux pump N7988_22925 PF06827 Zinc finger found in FPG and IleRS N7988_22925 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain N7988_22925 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain N7988_22930 PF01367 5'-3' exonuclease, C-terminal SAM fold N7988_22930 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain N7988_22930 PF00476 DNA polymerase family A N7988_22935 PF16736 Single Cache-like N7988_22935 PF00989 PAS fold N7988_22935 PF00512 His Kinase A (phospho-acceptor) domain N7988_22935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N7988_22940 PF00486 Transcriptional regulatory protein, C terminal N7988_22940 PF00072 Response regulator receiver domain N7988_22960 PF00056 lactate/malate dehydrogenase, NAD binding domain N7988_22960 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain N7988_22965 PF00180 Isocitrate/isopropylmalate dehydrogenase N7988_22970 PF00285 Citrate synthase, C-terminal domain N7988_22975 PF04284 Protein of unknown function (DUF441) N7988_22980 PF01594 AI-2E family transporter N7988_22985 PF04186 FxsA cytoplasmic membrane protein N7988_22990 PF00224 Pyruvate kinase, barrel domain N7988_22990 PF02887 Pyruvate kinase, alpha/beta domain N7988_22990 PF00391 PEP-utilising enzyme, mobile domain N7988_22995 PF00365 Phosphofructokinase N7988_23000 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit N7988_23005 PF01039 Carboxyl transferase domain N7988_23005 PF17848 Acetyl-coA carboxylase zinc finger domain N7988_23010 PF00392 Bacterial regulatory proteins, gntR family N7988_23015 PF03949 Malic enzyme, NAD binding domain N7988_23015 PF00390 Malic enzyme, N-terminal domain N7988_23020 PF01336 OB-fold nucleic acid binding domain N7988_23020 PF02811 PHP domain N7988_23020 PF14579 Helix-hairpin-helix motif N7988_23020 PF17657 Bacterial DNA polymerase III alpha subunit finger domain N7988_23020 PF07733 Bacterial DNA polymerase III alpha NTPase domain N7988_23025 PF14034 Sporulation protein YtrH N7988_23035 PF01368 DHH family N7988_23035 PF02272 DHHA1 domain N7988_23040 PF14007 YtpI-like protein N7988_23050 PF03061 Thioesterase superfamily N7988_23050 PF00571 CBS domain N7988_23050 PF07085 DRTGG domain N7988_23050 PF00392 Bacterial regulatory proteins, gntR family N7988_23065 PF01321 Creatinase/Prolidase N-terminal domain N7988_23065 PF00557 Metallopeptidase family M24 N7988_23115 PF07883 Cupin domain N7988_23125 PF05222 Alanine dehydrogenase/PNT, N-terminal domain N7988_23125 PF01262 Alanine dehydrogenase/PNT, C-terminal domain N7988_23135 PF00582 Universal stress protein family N7988_23155 PF14698 Argininosuccinate lyase C-terminal N7988_23155 PF00206 Lyase N7988_23160 PF00764 Arginosuccinate synthase N7988_23175 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) N7988_23175 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 N7988_23180 PF12787 EcsC protein family N7988_23195 PF00871 Acetokinase family N7988_23200 PF02384 N-6 DNA Methylase N7988_23205 PF08534 Redoxin N7988_23210 PF09579 Sporulation protein YtfJ (Spore_YtfJ) N7988_23220 PF01513 ATP-NAD kinase N7988_23225 PF07969 Amidohydrolase family N7988_23235 PF00501 AMP-binding enzyme N7988_23235 PF13193 AMP-binding enzyme C-terminal domain N7988_23240 PF00269 Small, acid-soluble spore proteins, alpha/beta type N7988_23245 PF02568 Thiamine biosynthesis protein (ThiI) N7988_23245 PF02926 THUMP domain N7988_23250 PF00266 Aminotransferase class-V N7988_23255 PF06160 Septation ring formation regulator, EzrA N7988_23260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N7988_23260 PF03466 LysR substrate binding domain N7988_23265 PF00892 EamA-like transporter family N7988_23270 PF00440 Bacterial regulatory proteins, tetR family N7988_23275 PF13185 GAF domain N7988_23280 PF01053 Cys/Met metabolism PLP-dependent enzyme N7988_23285 PF00163 Ribosomal protein S4/S9 N-terminal domain N7988_23285 PF01479 S4 domain N7988_23315 PF01479 S4 domain N7988_23315 PF00579 tRNA synthetases class I (W and Y) N7988_23325 PF04542 Sigma-70 region 2 N7988_23325 PF08281 Sigma-70, region 4 N7988_23335 PF14602 Hexapeptide repeat of succinyl-transferase N7988_23335 PF12464 Maltose acetyltransferase N7988_23340 PF00501 AMP-binding enzyme N7988_23340 PF13193 AMP-binding enzyme C-terminal domain N7988_23345 PF00583 Acetyltransferase (GNAT) family N7988_23350 PF00571 CBS domain N7988_23355 PF00850 Histone deacetylase domain N7988_23370 PF00486 Transcriptional regulatory protein, C terminal N7988_23370 PF00072 Response regulator receiver domain N7988_23375 PF16736 Single Cache-like N7988_23375 PF00989 PAS fold N7988_23375 PF00512 His Kinase A (phospho-acceptor) domain N7988_23375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N7988_23380 PF12796 Ankyrin repeats (3 copies) N7988_23385 PF06580 Histidine kinase N7988_23385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N7988_23405 PF00072 Response regulator receiver domain N7988_23405 PF04397 LytTr DNA-binding domain N7988_23410 PF01408 Oxidoreductase family, NAD-binding Rossmann fold N7988_23415 PF01741 Large-conductance mechanosensitive channel, MscL N7988_23430 PF00356 Bacterial regulatory proteins, lacI family N7988_23435 PF01817 Chorismate mutase type II N7988_23435 PF00793 DAHP synthetase I family N7988_23440 PF07537 CamS sex pheromone cAM373 precursor N7988_23445 PF11009 Protein of unknown function (DUF2847) N7988_23455 PF02073 Thermophilic metalloprotease (M29) N7988_23470 PF13302 Acetyltransferase (GNAT) domain N7988_23475 PF01225 Mur ligase family, catalytic domain N7988_23475 PF02875 Mur ligase family, glutamate ligase domain N7988_23475 PF08245 Mur ligase middle domain N7988_23485 PF17854 FtsK alpha domain N7988_23485 PF09397 Ftsk gamma domain N7988_23485 PF01580 FtsK/SpoIIIE family N7988_23490 PF08239 Bacterial SH3 domain N7988_23490 PF01520 N-acetylmuramoyl-L-alanine amidase N7988_23500 PF01588 Putative tRNA binding domain N7988_23500 PF14794 Domain of unknown function (DUF4479) N7988_23505 PF07285 Protein of unknown function (DUF1444) N7988_23510 PF00085 Thioredoxin N7988_23515 PF01931 Protein of unknown function DUF84 N7988_23520 PF05343 M42 glutamyl aminopeptidase N7988_23530 PF00753 Metallo-beta-lactamase superfamily N7988_23535 PF02390 Putative methyltransferase N7988_23540 PF14165 YtzH-like protein N7988_23545 PF01636 Phosphotransferase enzyme family N7988_23550 PF00128 Alpha amylase, catalytic domain N7988_23550 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) N7988_23550 PF17999 Pullulanase N1-terminal domain N7988_23555 PF02834 LigT like Phosphoesterase N7988_23560 PF01546 Peptidase family M20/M25/M40 N7988_23565 PF08220 DeoR-like helix-turn-helix domain N7988_23570 PF00849 RNA pseudouridylate synthase N7988_23570 PF01479 S4 domain N7988_23575 PF01943 Polysaccharide biosynthesis protein N7988_23575 PF14667 Polysaccharide biosynthesis C-terminal domain N7988_23585 PF07690 Major Facilitator Superfamily N7988_23590 PF01022 Bacterial regulatory protein, arsR family N7988_23595 PF08327 Activator of Hsp90 ATPase homolog 1-like protein N7988_23605 PF10957 Sporulation protein Cse60 N7988_23615 PF02559 CarD-like/TRCF domain N7988_23625 PF06800 Sugar transport protein N7988_23640 PF02391 MoaE protein N7988_23645 PF03205 Molybdopterin guanine dinucleotide synthesis protein B N7988_23650 PF00994 Probable molybdopterin binding domain N7988_23650 PF03453 MoeA N-terminal region (domain I and II) N7988_23650 PF03454 MoeA C-terminal region (domain IV) N7988_23655 PF01967 MoaC family N7988_23660 PF00899 ThiF family N7988_23665 PF06463 Molybdenum Cofactor Synthesis C N7988_23665 PF04055 Radical SAM superfamily N7988_23685 PF00581 Rhodanese-like domain N7988_23695 PF00561 alpha/beta hydrolase fold N7988_23700 PF03323 Bacillus/Clostridium GerA spore germination protein N7988_23705 PF03845 Spore germination protein N7988_23735 PF00133 tRNA synthetases class I (I, L, M and V) N7988_23735 PF13603 Leucyl-tRNA synthetase, Domain 2 N7988_23735 PF09334 tRNA synthetases class I (M) N7988_23735 PF08264 Anticodon-binding domain of tRNA N7988_23740 PF07690 Major Facilitator Superfamily N7988_23745 PF00999 Sodium/hydrogen exchanger family N7988_23750 PF02080 TrkA-C domain N7988_23755 PF00589 Phage integrase family N7988_23765 PF00005 ABC transporter N7988_23770 PF07786 Protein of unknown function (DUF1624) N7988_23770 PF04235 Protein of unknown function (DUF418) N7988_23780 PF10732 Protein of unknown function (DUF2524) N7988_23785 PF16199 Radical_SAM C-terminal domain N7988_23785 PF04055 Radical SAM superfamily N7988_23790 PF06962 Putative rRNA methylase N7988_23795 PF13732 Domain of unknown function (DUF4162) N7988_23795 PF00005 ABC transporter N7988_23805 PF01177 Asp/Glu/Hydantoin racemase N7988_23815 PF10776 Protein of unknown function (DUF2600) N7988_23820 PF12146 Serine aminopeptidase, S33 N7988_23825 PF00132 Bacterial transferase hexapeptide (six repeats) N7988_23830 PF01569 PAP2 superfamily N7988_23835 PF13439 Glycosyltransferase Family 4 N7988_23835 PF00534 Glycosyl transferases group 1 N7988_23840 PF12804 MobA-like NTP transferase domain N7988_23845 PF00994 Probable molybdopterin binding domain N7988_23860 PF13302 Acetyltransferase (GNAT) domain N7988_23865 PF02773 S-adenosylmethionine synthetase, C-terminal domain N7988_23865 PF02772 S-adenosylmethionine synthetase, central domain N7988_23865 PF00438 S-adenosylmethionine synthetase, N-terminal domain N7988_23870 PF01293 Phosphoenolpyruvate carboxykinase N7988_23900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N7988_23900 PF13426 PAS domain N7988_23900 PF00512 His Kinase A (phospho-acceptor) domain N7988_23900 PF13188 PAS domain N7988_23900 PF00989 PAS fold N7988_23905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N7988_23905 PF00512 His Kinase A (phospho-acceptor) domain N7988_23905 PF02743 Cache domain N7988_23910 PF08386 TAP-like protein N7988_23910 PF00561 alpha/beta hydrolase fold N7988_23915 PF00884 Sulfatase N7988_23945 PF00005 ABC transporter N7988_23950 PF00528 Binding-protein-dependent transport system inner membrane component N7988_23965 PF13419 Haloacid dehalogenase-like hydrolase N7988_23975 PF00293 NUDIX domain N7988_24005 PF02664 S-Ribosylhomocysteinase (LuxS) N7988_24010 PF01809 Putative membrane protein insertion efficiency factor N7988_24015 PF00484 Carbonic anhydrase N7988_24020 PF01654 Cytochrome bd terminal oxidase subunit I N7988_24025 PF02322 Cytochrome bd terminal oxidase subunit II N7988_24030 PF10676 Spore germination protein gerPA/gerPF N7988_24040 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 N7988_24040 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) N7988_24060 PF04012 PspA/IM30 family N7988_24075 PF02421 Ferrous iron transport protein B N7988_24075 PF07670 Nucleoside recognition N7988_24075 PF07664 Ferrous iron transport protein B C terminus N7988_24075 PF17910 FeoB cytosolic helical domain N7988_24085 PF09515 Thiamine transporter protein (Thia_YuaJ) N7988_24090 PF00512 His Kinase A (phospho-acceptor) domain N7988_24090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N7988_24090 PF00672 HAMP domain N7988_24095 PF00072 Response regulator receiver domain N7988_24095 PF00486 Transcriptional regulatory protein, C terminal N7988_24120 PF00156 Phosphoribosyl transferase domain N7988_24125 PF00781 Diacylglycerol kinase catalytic domain N7988_24150 PF09335 SNARE associated Golgi protein N7988_24155 PF00398 Ribosomal RNA adenine dimethylase N7988_24160 PF02687 FtsX-like permease family N7988_24165 PF00005 ABC transporter N7988_24170 PF06445 GyrI-like small molecule binding domain N7988_24170 PF12833 Helix-turn-helix domain N7988_24190 PF07853 Protein of unknown function (DUF1648) N7988_24190 PF13630 SdpI/YhfL protein family N7988_24195 PF01022 Bacterial regulatory protein, arsR family N7988_24200 PF00072 Response regulator receiver domain N7988_24200 PF00486 Transcriptional regulatory protein, C terminal N7988_24205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N7988_24210 PF02687 FtsX-like permease family N7988_24215 PF02687 FtsX-like permease family N7988_24220 PF00005 ABC transporter N7988_24225 PF02687 FtsX-like permease family N7988_24235 PF00440 Bacterial regulatory proteins, tetR family N7988_24235 PF13977 BetI-type transcriptional repressor, C-terminal N7988_24245 PF02447 GntP family permease N7988_24250 PF00392 Bacterial regulatory proteins, gntR family N7988_24250 PF07702 UTRA domain N7988_24260 PF07071 KDGP aldolase N7988_24265 PF03841 L-seryl-tRNA selenium transferase N7988_24270 PF01979 Amidohydrolase family N7988_24275 PF02557 D-alanyl-D-alanine carboxypeptidase N7988_24280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N7988_24280 PF00512 His Kinase A (phospho-acceptor) domain N7988_24285 PF00072 Response regulator receiver domain N7988_24285 PF00486 Transcriptional regulatory protein, C terminal N7988_24290 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain N7988_24290 PF13378 Enolase C-terminal domain-like N7988_24295 PF12323 Helix-turn-helix domain N7988_24295 PF07282 Putative transposase DNA-binding domain N7988_24295 PF01385 Probable transposase N7988_24305 PF00501 AMP-binding enzyme N7988_24305 PF13193 AMP-binding enzyme C-terminal domain N7988_24310 PF00378 Enoyl-CoA hydratase/isomerase N7988_24315 PF12697 Alpha/beta hydrolase family N7988_24320 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain N7988_24320 PF16582 Middle domain of thiamine pyrophosphate N7988_24320 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain N7988_24325 PF00425 chorismate binding enzyme N7988_24330 PF01040 UbiA prenyltransferase family N7988_24335 PF01258 Prokaryotic dksA/traR C4-type zinc finger N7988_24340 PF00313 'Cold-shock' DNA-binding domain N7988_24365 PF00343 Carbohydrate phosphorylase N7988_24370 PF08323 Starch synthase catalytic domain N7988_24370 PF00534 Glycosyl transferases group 1 N7988_24375 PF00483 Nucleotidyl transferase N7988_24380 PF00483 Nucleotidyl transferase N7988_24385 PF02806 Alpha amylase, C-terminal all-beta domain N7988_24385 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) N7988_24385 PF00128 Alpha amylase, catalytic domain N7988_24395 PF00056 lactate/malate dehydrogenase, NAD binding domain N7988_24395 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain N7988_24490 PF05698 Bacterial trigger factor protein (TF) C-terminus N7988_24490 PF05697 Bacterial trigger factor protein (TF) N7988_24525 PF02308 MgtC family N7988_24530 PF07885 Ion channel N7988_24530 PF02254 TrkA-N domain N7988_24535 PF08868 YugN-like family N7988_24540 PF00342 Phosphoglucose isomerase N7988_24545 PF04070 Domain of unknown function (DUF378) N7988_24550 PF00575 S1 RNA binding domain N7988_24555 PF00155 Aminotransferase class I and II N7988_24560 PF01037 Lrp/AsnC ligand binding domain N7988_24565 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain N7988_24565 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain N7988_24570 PF00561 alpha/beta hydrolase fold N7988_24570 PF08386 TAP-like protein N7988_24580 PF00155 Aminotransferase class I and II N7988_24595 PF08810 Kinase associated protein B N7988_24600 PF00929 Exonuclease N7988_24605 PF03600 Citrate transporter N7988_24620 PF03129 Anticodon binding domain N7988_24620 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) N7988_24625 PF03061 Thioesterase superfamily N7988_24635 PF02632 BioY family N7988_24640 PF00483 Nucleotidyl transferase N7988_24645 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I N7988_24645 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II N7988_24645 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III N7988_24645 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain N7988_24650 PF02457 DisA bacterial checkpoint controller nucleotide-binding N7988_24650 PF10372 Bacterial membrane-spanning protein N-terminus N7988_24655 PF00883 Cytosol aminopeptidase family, catalytic domain N7988_24655 PF02789 Cytosol aminopeptidase family, N-terminal domain N7988_24660 PF06725 3D domain N7988_24670 PF00293 NUDIX domain N7988_24670 PF13344 Haloacid dehalogenase-like hydrolase N7988_24675 PF07992 Pyridine nucleotide-disulphide oxidoreductase N7988_24680 PF07992 Pyridine nucleotide-disulphide oxidoreductase N7988_24690 PF06445 GyrI-like small molecule binding domain N7988_24705 PF04463 Protein of unknown function (DUF523) N7988_24725 PF01521 Iron-sulphur cluster biosynthesis N7988_24730 PF01678 Diaminopimelate epimerase N7988_24735 PF07293 Protein of unknown function (DUF1450) N7988_24740 PF07992 Pyridine nucleotide-disulphide oxidoreductase N7988_24750 PF00005 ABC transporter N7988_24750 PF09383 NIL domain N7988_24755 PF03649 Uncharacterised protein family (UPF0014) N7988_24760 PF08274 PhnA Zinc-Ribbon N7988_24760 PF03831 PhnA domain N7988_24785 PF07315 Protein of unknown function (DUF1462) N7988_24790 PF01106 NifU-like domain N7988_24805 PF04608 Phosphatidylglycerophosphatase A N7988_24825 PF15608 PELOTA RNA binding domain N7988_24825 PF11202 Phosphoribosyl transferase (PRTase) N7988_24835 PF02525 Flavodoxin-like fold N7988_24840 PF13344 Haloacid dehalogenase-like hydrolase N7988_24850 PF01934 Protein of unknown function DUF86 N7988_24855 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded N7988_24870 PF06265 Protein of unknown function (DUF1027) N7988_24875 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) N7988_24880 PF13411 MerR HTH family regulatory protein N7988_24880 PF07739 TipAS antibiotic-recognition domain N7988_24885 PF10086 YhfC intramembrane metalloprotease N7988_24905 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family N7988_24905 PF04055 Radical SAM superfamily N7988_24910 PF01551 Peptidase family M23 N7988_24915 PF09560 Sporulation protein YunB (Spo_YunB) N7988_24920 PF08827 Domain of unknown function (DUF1805) N7988_24925 PF02872 5'-nucleotidase, C-terminal domain N7988_24930 PF01458 Uncharacterized protein family (UPF0051) N7988_24935 PF01592 NifU-like N terminal domain N7988_24940 PF00266 Aminotransferase class-V N7988_24945 PF01458 Uncharacterized protein family (UPF0051) N7988_24950 PF00005 ABC transporter N7988_24955 PF03180 NLPA lipoprotein N7988_24960 PF03180 NLPA lipoprotein N7988_24965 PF00528 Binding-protein-dependent transport system inner membrane component N7988_24970 PF00005 ABC transporter N7988_24970 PF09383 NIL domain N7988_24980 PF00085 Thioredoxin N7988_24985 PF01751 Toprim domain N7988_24990 PF01597 Glycine cleavage H-protein N7988_24995 PF03960 ArsC family N7988_25015 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain N7988_25015 PF00056 lactate/malate dehydrogenase, NAD binding domain N7988_25030 PF00440 Bacterial regulatory proteins, tetR family N7988_25030 PF13305 Tetracyclin repressor-like, C-terminal domain N7988_25035 PF00753 Metallo-beta-lactamase superfamily N7988_25040 PF00441 Acyl-CoA dehydrogenase, C-terminal domain N7988_25040 PF02770 Acyl-CoA dehydrogenase, middle domain N7988_25040 PF02771 Acyl-CoA dehydrogenase, N-terminal domain N7988_25045 PF02803 Thiolase, C-terminal domain N7988_25045 PF00108 Thiolase, N-terminal domain N7988_25050 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain N7988_25050 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain N7988_25050 PF00378 Enoyl-CoA hydratase/isomerase N7988_25055 PF14115 YuzL-like protein N7988_25060 PF07943 Penicillin-binding protein 5, C-terminal domain N7988_25060 PF00768 D-alanyl-D-alanine carboxypeptidase N7988_25065 PF01619 Proline dehydrogenase N7988_25070 PF10835 Protein of unknown function (DUF2573) N7988_25075 PF01910 Thiamine-binding protein N7988_25080 PF00672 HAMP domain N7988_25080 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N7988_25080 PF02743 Cache domain N7988_25095 PF07690 Major Facilitator Superfamily N7988_25100 PF13520 Amino acid permease N7988_25110 PF02096 60Kd inner membrane protein N7988_25120 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 N7988_25120 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) N7988_25155 PF09335 SNARE associated Golgi protein N7988_25165 PF17969 L,D-transpeptidase C-terminal domain N7988_25165 PF03734 L,D-transpeptidase catalytic domain N7988_25170 PF00486 Transcriptional regulatory protein, C terminal N7988_25170 PF00072 Response regulator receiver domain N7988_25175 PF00512 His Kinase A (phospho-acceptor) domain N7988_25175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N7988_25175 PF00989 PAS fold N7988_25175 PF16736 Single Cache-like N7988_25190 PF08264 Anticodon-binding domain of tRNA N7988_25190 PF09334 tRNA synthetases class I (M) N7988_25200 PF02743 Cache domain N7988_25200 PF00672 HAMP domain N7988_25200 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N7988_25205 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N7988_25205 PF00672 HAMP domain N7988_25205 PF02743 Cache domain N7988_25210 PF01883 Iron-sulfur cluster assembly protein N7988_25215 PF02868 Thermolysin metallopeptidase, alpha-helical domain N7988_25215 PF03413 Peptidase propeptide and YPEB domain N7988_25215 PF01447 Thermolysin metallopeptidase, catalytic domain N7988_25215 PF07504 Fungalysin/Thermolysin Propeptide Motif N7988_25220 PF02678 Pirin N7988_25220 PF17954 Quercetinase C-terminal cupin domain N7988_25225 PF01047 MarR family N7988_25235 PF09335 SNARE associated Golgi protein N7988_25240 PF00999 Sodium/hydrogen exchanger family N7988_25245 PF02080 TrkA-C domain N7988_25250 PF01235 Sodium:alanine symporter family N7988_25255 PF00210 Ferritin-like domain N7988_25270 PF03641 Possible lysine decarboxylase N7988_25280 PF00210 Ferritin-like domain N7988_25285 PF04235 Protein of unknown function (DUF418) N7988_25285 PF07786 Protein of unknown function (DUF1624) N7988_25290 PF07662 Na+ dependent nucleoside transporter C-terminus N7988_25290 PF01773 Na+ dependent nucleoside transporter N-terminus N7988_25295 PF01773 Na+ dependent nucleoside transporter N-terminus N7988_25295 PF07662 Na+ dependent nucleoside transporter C-terminus N7988_25300 PF01235 Sodium:alanine symporter family N7988_25305 PF01235 Sodium:alanine symporter family N7988_25310 PF13460 NAD(P)H-binding N7988_25325 PF00248 Aldo/keto reductase family N7988_25330 PF07690 Major Facilitator Superfamily N7988_25335 PF01638 HxlR-like helix-turn-helix N7988_25340 PF07849 Protein of unknown function (DUF1641) N7988_25345 PF07992 Pyridine nucleotide-disulphide oxidoreductase N7988_25350 PF01479 S4 domain N7988_25350 PF00579 tRNA synthetases class I (W and Y) N7988_25355 PF01565 FAD binding domain N7988_25355 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain N7988_25365 PF17202 Single cache domain 3 N7988_25365 PF00672 HAMP domain N7988_25365 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N7988_25375 PF02537 CrcB-like protein, Camphor Resistance (CrcB) N7988_25380 PF02537 CrcB-like protein, Camphor Resistance (CrcB) N7988_25395 PF07690 Major Facilitator Superfamily N7988_25400 PF00005 ABC transporter N7988_25400 PF12848 ABC transporter N7988_25405 PF13302 Acetyltransferase (GNAT) domain N7988_25410 PF06146 Phosphate-starvation-inducible E N7988_25425 PF17440 Thiol-activated cytolysin beta sandwich domain N7988_25425 PF01289 Thiol-activated cytolysin N7988_25430 PF00005 ABC transporter N7988_25435 PF01032 FecCD transport family N7988_25440 PF01032 FecCD transport family N7988_25450 PF00072 Response regulator receiver domain N7988_25450 PF00486 Transcriptional regulatory protein, C terminal N7988_25460 PF01668 SmpB protein N7988_25465 PF00773 RNB domain N7988_25465 PF00575 S1 RNA binding domain N7988_25465 PF17876 Cold shock domain N7988_25465 PF08206 Ribonuclease B OB domain N7988_25470 PF12146 Serine aminopeptidase, S33 N7988_25475 PF03840 Preprotein translocase SecG subunit N7988_25480 PF04172 LrgB-like family N7988_25485 PF03788 LrgA family N7988_25490 PF01156 Inosine-uridine preferring nucleoside hydrolase N7988_25495 PF00113 Enolase, C-terminal TIM barrel domain N7988_25495 PF03952 Enolase, N-terminal domain N7988_25500 PF01676 Metalloenzyme superfamily N7988_25500 PF06415 BPG-independent PGAM N-terminus (iPGM_N) N7988_25505 PF00121 Triosephosphate isomerase N7988_25510 PF00162 Phosphoglycerate kinase N7988_25515 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain N7988_25515 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain N7988_25520 PF04198 Putative sugar-binding domain N7988_25530 PF04552 Sigma-54, DNA binding domain N7988_25530 PF04963 Sigma-54 factor, core binding domain N7988_25530 PF00309 Sigma-54 factor, Activator interacting domain (AID) N7988_25550 PF03862 SpoVAC/SpoVAEB sporulation membrane protein N7988_25555 PF07451 Stage V sporulation protein AD (SpoVAD) N7988_25560 PF03862 SpoVAC/SpoVAEB sporulation membrane protein N7988_25570 PF04239 Protein of unknown function (DUF421) N7988_25575 PF00574 Clp protease N7988_25580 PF00381 PTS HPr component phosphorylation site N7988_25585 PF02650 WhiA C-terminal HTH domain N7988_25585 PF10298 WhiA N-terminal LAGLIDADG-like domain N7988_25585 PF14527 WhiA LAGLIDADG-like domain N7988_25590 PF01933 Uncharacterised protein family UPF0052 N7988_25595 PF03668 P-loop ATPase protein family N7988_25600 PF00293 NUDIX domain N7988_25610 PF07992 Pyridine nucleotide-disulphide oxidoreductase N7988_25620 PF14602 Hexapeptide repeat of succinyl-transferase N7988_25625 PF13419 Haloacid dehalogenase-like hydrolase N7988_25630 PF01790 Prolipoprotein diacylglyceryl transferase N7988_25635 PF02603 HPr Serine kinase N terminus N7988_25635 PF07475 HPr Serine kinase C-terminal domain N7988_25640 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV N7988_25650 PF17760 UvrA interaction domain N7988_25650 PF00005 ABC transporter N7988_25650 PF17755 UvrA DNA-binding domain N7988_25655 PF17757 UvrB interaction domain N7988_25655 PF12344 Ultra-violet resistance protein B N7988_25655 PF02151 UvrB/uvrC motif N7988_25655 PF04851 Type III restriction enzyme, res subunit N7988_25655 PF00271 Helicase conserved C-terminal domain N7988_25670 PF07739 TipAS antibiotic-recognition domain N7988_25670 PF13411 MerR HTH family regulatory protein N7988_25685 PF03601 Conserved hypothetical protein 698 N7988_25690 PF03466 LysR substrate binding domain N7988_25690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N7988_25695 PF09278 MerR, DNA binding N7988_25695 PF00376 MerR family regulatory protein N7988_25700 PF03358 NADPH-dependent FMN reductase N7988_25705 PF00005 ABC transporter N7988_25705 PF12848 ABC transporter N7988_25710 PF01906 Putative heavy-metal-binding N7988_25715 PF00664 ABC transporter transmembrane region N7988_25715 PF00005 ABC transporter N7988_25720 PF17820 PDZ domain N7988_25725 PF01471 Putative peptidoglycan binding domain N7988_25725 PF03572 Peptidase family S41 N7988_25725 PF17820 PDZ domain N7988_25730 PF02687 FtsX-like permease family N7988_25730 PF18075 FtsX extracellular domain N7988_25735 PF00005 ABC transporter N7988_25740 PF13442 Cytochrome C oxidase, cbb3-type, subunit III N7988_25750 PF02810 SEC-C motif N7988_25750 PF01043 SecA preprotein cross-linking domain N7988_25750 PF07516 SecA Wing and Scaffold domain N7988_25750 PF07517 SecA DEAD-like domain N7988_25760 PF00005 ABC transporter N7988_25790 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus N7988_25790 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein N7988_25795 PF00313 'Cold-shock' DNA-binding domain N7988_25805 PF00271 Helicase conserved C-terminal domain N7988_25805 PF04851 Type III restriction enzyme, res subunit N7988_25810 PF01476 LysM domain N7988_25810 PF00877 NlpC/P60 family N7988_25815 PF01638 HxlR-like helix-turn-helix N7988_25820 PF02645 Uncharacterised protein, DegV family COG1307 N7988_25825 PF09186 Domain of unknown function (DUF1949) N7988_25825 PF01205 Uncharacterized protein family UPF0029 N7988_25830 PF03816 Cell envelope-related transcriptional attenuator domain N7988_25835 PF02350 UDP-N-acetylglucosamine 2-epimerase N7988_25840 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain N7988_25840 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain N7988_25840 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain N7988_25845 PF00953 Glycosyl transferase family 4 N7988_25850 PF01522 Polysaccharide deacetylase N7988_25855 PF00158 Sigma-54 interaction domain N7988_25855 PF00874 PRD domain N7988_25855 PF03610 PTS system fructose IIA component N7988_25865 PF02417 Chromate transporter N7988_25870 PF04794 YdjC-like protein N7988_25875 PF02056 Family 4 glycosyl hydrolase N7988_25875 PF11975 Family 4 glycosyl hydrolase C-terminal domain N7988_25880 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit N7988_25885 PF02378 Phosphotransferase system, EIIC N7988_25890 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit N7988_25895 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit N7988_25900 PF02378 Phosphotransferase system, EIIC N7988_25905 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit N7988_25910 PF00375 Sodium:dicarboxylate symporter family N7988_25930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N7988_25930 PF03466 LysR substrate binding domain N7988_25945 PF01654 Cytochrome bd terminal oxidase subunit I N7988_25950 PF02322 Cytochrome bd terminal oxidase subunit II N7988_25955 PF02040 Arsenical pump membrane protein N7988_25960 PF13667 ThiC-associated domain N7988_25960 PF01964 Radical SAM ThiC family N7988_25965 PF02652 L-lactate permease N7988_25975 PF09988 Uncharacterized metal-binding protein (DUF2227) N7988_25985 PF00884 Sulfatase N7988_25990 PF01063 Amino-transferase class IV N7988_25995 PF00877 NlpC/P60 family N7988_25995 PF01476 LysM domain N7988_26000 PF01773 Na+ dependent nucleoside transporter N-terminus N7988_26000 PF07662 Na+ dependent nucleoside transporter C-terminus N7988_26015 PF02028 BCCT, betaine/carnitine/choline family transporter N7988_26020 PF01476 LysM domain N7988_26020 PF06725 3D domain N7988_26045 PF04434 SWIM zinc finger N7988_26050 PF00176 SNF2 family N-terminal domain N7988_26050 PF12419 SNF2 Helicase protein N7988_26050 PF00271 Helicase conserved C-terminal domain N7988_26080 PF04545 Sigma-70, region 4 N7988_26080 PF04542 Sigma-70 region 2 N7988_26085 PF04893 Yip1 domain N7988_26090 PF12704 MacB-like periplasmic core domain N7988_26090 PF02687 FtsX-like permease family N7988_26095 PF00005 ABC transporter N7988_26115 PF07690 Major Facilitator Superfamily N7988_26130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N7988_26130 PF00512 His Kinase A (phospho-acceptor) domain N7988_26130 PF00989 PAS fold N7988_26130 PF16736 Single Cache-like N7988_26135 PF00072 Response regulator receiver domain N7988_26135 PF00486 Transcriptional regulatory protein, C terminal N7988_26145 PF03816 Cell envelope-related transcriptional attenuator domain N7988_26150 PF16363 GDP-mannose 4,6 dehydratase N7988_26160 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain N7988_26160 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain N7988_26160 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain N7988_26165 PF01943 Polysaccharide biosynthesis protein N7988_26170 PF00535 Glycosyl transferase family 2 N7988_26175 PF00535 Glycosyl transferase family 2 N7988_26195 PF00535 Glycosyl transferase family 2 N7988_26200 PF02397 Bacterial sugar transferase N7988_26205 PF00483 Nucleotidyl transferase N7988_26215 PF13614 AAA domain N7988_26220 PF13807 G-rich domain on putative tyrosine kinase N7988_26220 PF02706 Chain length determinant protein N7988_26225 PF13614 AAA domain N7988_26230 PF07977 FabA-like domain N7988_26240 PF12116 Stage III sporulation protein D N7988_26250 PF01551 Peptidase family M23 N7988_26260 PF00005 ABC transporter N7988_26265 PF00005 ABC transporter N7988_26270 PF08486 Stage II sporulation protein N7988_26275 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) N7988_26285 PF06612 Protein of unknown function (DUF1146) N7988_26290 PF00361 Proton-conducting membrane transporter N7988_26295 PF00361 Proton-conducting membrane transporter N7988_26300 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus N7988_26300 PF00361 Proton-conducting membrane transporter N7988_26300 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus N7988_26305 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L N7988_26310 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 N7988_26320 PF00146 NADH dehydrogenase N7988_26325 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit N7988_26330 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit N7988_26335 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit N7988_26340 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 N7988_26345 PF00990 Diguanylate cyclase, GGDEF domain N7988_26345 PF00563 EAL domain N7988_26345 PF03707 Bacterial signalling protein N terminal repeat N7988_26360 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain N7988_26360 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain N7988_26365 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain N7988_26365 PF02874 ATP synthase alpha/beta family, beta-barrel domain N7988_26370 PF00231 ATP synthase N7988_26375 PF00306 ATP synthase alpha/beta chain, C terminal domain N7988_26375 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain N7988_26375 PF02874 ATP synthase alpha/beta family, beta-barrel domain N7988_26380 PF00213 ATP synthase delta (OSCP) subunit N7988_26385 PF00430 ATP synthase B/B' CF(0) N7988_26390 PF00137 ATP synthase subunit C N7988_26395 PF00119 ATP synthase A chain N7988_26400 PF03899 ATP synthase I chain N7988_26420 PF00464 Serine hydroxymethyltransferase N7988_26425 PF04260 Protein of unknown function (DUF436) N7988_26430 PF02502 Ribose/Galactose Isomerase N7988_26435 PF01451 Low molecular weight phosphotyrosine protein phosphatase N7988_26440 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 N7988_26445 PF07681 DoxX N7988_26450 PF01613 Flavin reductase like domain N7988_26465 PF02659 Putative manganese efflux pump N7988_26470 PF01300 Telomere recombination N7988_26470 PF03481 Putative GTP-binding controlling metal-binding N7988_26480 PF09551 Stage II sporulation protein R (spore_II_R) N7988_26485 PF17827 PrmC N-terminal domain N7988_26485 PF13847 Methyltransferase domain N7988_26490 PF00472 RF-1 domain N7988_26490 PF03462 PCRF domain N7988_26495 PF00265 Thymidine kinase N7988_26500 PF01197 Ribosomal protein L31 N7988_26505 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain N7988_26505 PF07498 Rho termination factor, N-terminal domain N7988_26505 PF07497 Rho termination factor, RNA-binding domain N7988_26510 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded N7988_26515 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) N7988_26520 PF01116 Fructose-bisphosphate aldolase class-II N7988_26525 PF00072 Response regulator receiver domain N7988_26530 PF10740 Domain of unknown function (DUF2529) N7988_26535 PF06418 CTP synthase N-terminus N7988_26535 PF00117 Glutamine amidotransferase class-I N7988_26540 PF05066 HB1, ASXL, restriction endonuclease HTH domain N7988_26550 PF00441 Acyl-CoA dehydrogenase, C-terminal domain N7988_26550 PF02770 Acyl-CoA dehydrogenase, middle domain N7988_26550 PF02771 Acyl-CoA dehydrogenase, N-terminal domain N7988_26555 PF00441 Acyl-CoA dehydrogenase, C-terminal domain N7988_26555 PF02770 Acyl-CoA dehydrogenase, middle domain N7988_26555 PF02771 Acyl-CoA dehydrogenase, N-terminal domain N7988_26560 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain N7988_26560 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain N7988_26565 PF00108 Thiolase, N-terminal domain N7988_26565 PF02803 Thiolase, C-terminal domain N7988_26570 PF02754 Cysteine-rich domain N7988_26570 PF13183 4Fe-4S dicluster domain N7988_26575 PF13091 PLD-like domain N7988_26580 PF03851 UV-endonuclease UvdE N7988_26585 PF00990 Diguanylate cyclase, GGDEF domain N7988_26585 PF03707 Bacterial signalling protein N terminal repeat N7988_26585 PF00563 EAL domain N7988_26600 PF02868 Thermolysin metallopeptidase, alpha-helical domain N7988_26600 PF01447 Thermolysin metallopeptidase, catalytic domain N7988_26600 PF03413 Peptidase propeptide and YPEB domain N7988_26600 PF07504 Fungalysin/Thermolysin Propeptide Motif N7988_26605 PF00196 Bacterial regulatory proteins, luxR family N7988_26605 PF00072 Response regulator receiver domain N7988_26610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N7988_26610 PF07730 Histidine kinase N7988_26620 PF00005 ABC transporter N7988_26625 PF00557 Metallopeptidase family M24 N7988_26635 PF04389 Peptidase family M28 N7988_26635 PF02225 PA domain N7988_26660 PF04542 Sigma-70 region 2 N7988_26660 PF08281 Sigma-70, region 4 N7988_26665 PF03485 Arginyl tRNA synthetase N terminal domain N7988_26665 PF00750 tRNA synthetases class I (R) N7988_26665 PF05746 DALR anticodon binding domain N7988_26670 PF09148 Domain of unknown function (DUF1934) N7988_26675 PF17676 LD-carboxypeptidase C-terminal domain N7988_26675 PF02016 LD-carboxypeptidase N-terminal domain N7988_26690 PF00491 Arginase family N7988_26695 PF17284 Spermidine synthase tetramerisation domain N7988_26700 PF07690 Major Facilitator Superfamily N7988_26705 PF13411 MerR HTH family regulatory protein N7988_26710 PF03009 Glycerophosphoryl diester phosphodiesterase family N7988_26715 PF00912 Transglycosylase N7988_26715 PF00905 Penicillin binding protein transpeptidase domain N7988_26720 PF08741 YwhD family N7988_26725 PF02163 Peptidase family M50 N7988_26730 PF01361 Tautomerase enzyme N7988_26735 PF01966 HD domain N7988_26740 PF01497 Periplasmic binding protein N7988_26745 PF00005 ABC transporter N7988_26750 PF01032 FecCD transport family N7988_26755 PF01032 FecCD transport family N7988_26760 PF07293 Protein of unknown function (DUF1450) N7988_26770 PF03099 Biotin/lipoate A/B protein ligase family N7988_26775 PF01515 Phosphate acetyl/butaryl transferase N7988_26780 PF06778 Chlorite dismutase N7988_26785 PF00768 D-alanyl-D-alanine carboxypeptidase N7988_26785 PF07943 Penicillin-binding protein 5, C-terminal domain N7988_26790 PF07486 Cell Wall Hydrolase N7988_26795 PF09671 Spore coat protein (Spore_GerQ) N7988_26800 PF04241 Protein of unknown function (DUF423) N7988_26810 PF07885 Ion channel N7988_26810 PF02254 TrkA-N domain N7988_26815 PF00860 Permease family N7988_26825 PF12823 Domain of unknown function (DUF3817) N7988_26830 PF03167 Uracil DNA glycosylase superfamily N7988_26835 PF12679 ABC-2 family transporter protein N7988_26840 PF00005 ABC transporter N7988_26845 PF13472 GDSL-like Lipase/Acylhydrolase family N7988_26850 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family N7988_26850 PF00356 Bacterial regulatory proteins, lacI family N7988_26860 PF03447 Homoserine dehydrogenase, NAD binding domain N7988_26860 PF00742 Homoserine dehydrogenase N7988_26860 PF01842 ACT domain N7988_26865 PF04204 Homoserine O-succinyltransferase N7988_26870 PF01053 Cys/Met metabolism PLP-dependent enzyme N7988_26880 PF13419 Haloacid dehalogenase-like hydrolase N7988_26885 PF00027 Cyclic nucleotide-binding domain N7988_26890 PF02525 Flavodoxin-like fold N7988_26895 PF00196 Bacterial regulatory proteins, luxR family N7988_26895 PF00072 Response regulator receiver domain N7988_26900 PF13185 GAF domain N7988_26900 PF07730 Histidine kinase N7988_26905 PF08543 Phosphomethylpyrimidine kinase N7988_26910 PF00990 Diguanylate cyclase, GGDEF domain N7988_26910 PF07694 5TMR of 5TMR-LYT N7988_26915 PF04328 Selenoprotein, putative N7988_26920 PF13722 5TM C-terminal transporter carbon starvation CstA N7988_26920 PF02554 Carbon starvation protein CstA N7988_26925 PF00072 Response regulator receiver domain N7988_26925 PF04397 LytTr DNA-binding domain N7988_26930 PF07690 Major Facilitator Superfamily N7988_26935 PF03808 Glycosyl transferase WecB/TagA/CpsF family N7988_26940 PF13439 Glycosyltransferase Family 4 N7988_26940 PF00534 Glycosyl transferases group 1 N7988_26950 PF03458 UPF0126 domain N7988_26955 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N7988_26965 PF03061 Thioesterase superfamily N7988_26970 PF00535 Glycosyl transferase family 2 N7988_26985 PF00535 Glycosyl transferase family 2 N7988_26995 PF09586 Bacterial membrane protein YfhO N7988_27000 PF00535 Glycosyl transferase family 2 N7988_27005 PF00005 ABC transporter N7988_27005 PF12848 ABC transporter N7988_27010 PF00440 Bacterial regulatory proteins, tetR family N7988_27015 PF00873 AcrB/AcrD/AcrF family N7988_27020 PF01625 Peptide methionine sulfoxide reductase N7988_27020 PF01641 SelR domain N7988_27025 PF01594 AI-2E family transporter N7988_27030 PF04172 LrgB-like family N7988_27035 PF03788 LrgA family N7988_27040 PF04397 LytTr DNA-binding domain N7988_27040 PF00072 Response regulator receiver domain N7988_27045 PF13492 GAF domain N7988_27045 PF07694 5TMR of 5TMR-LYT N7988_27045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N7988_27045 PF06580 Histidine kinase N7988_27050 PF07690 Major Facilitator Superfamily N7988_27055 PF02028 BCCT, betaine/carnitine/choline family transporter N7988_27060 PF02898 Nitric oxide synthase, oxygenase domain N7988_27065 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain N7988_27065 PF02777 Iron/manganese superoxide dismutases, C-terminal domain N7988_27075 PF02293 AmiS/UreI family transporter N7988_27080 PF16363 GDP-mannose 4,6 dehydratase N7988_27085 PF03006 Haemolysin-III related N7988_27095 PF00271 Helicase conserved C-terminal domain N7988_27095 PF00270 DEAD/DEAH box helicase N7988_27095 PF03880 DbpA RNA binding domain N7988_27100 PF00478 IMP dehydrogenase / GMP reductase domain N7988_27120 PF13426 PAS domain N7988_27120 PF00989 PAS fold N7988_27120 PF00512 His Kinase A (phospho-acceptor) domain N7988_27120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N7988_27120 PF13188 PAS domain N7988_27125 PF02590 Predicted SPOUT methyltransferase N7988_27135 PF13180 PDZ domain N7988_27140 PF00753 Metallo-beta-lactamase superfamily N7988_27145 PF09648 YycH protein N7988_27155 PF13426 PAS domain N7988_27155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N7988_27155 PF00672 HAMP domain N7988_27155 PF00512 His Kinase A (phospho-acceptor) domain N7988_27160 PF00486 Transcriptional regulatory protein, C terminal N7988_27160 PF00072 Response regulator receiver domain N7988_27185 PF00709 Adenylosuccinate synthetase N7988_27190 PF03796 DnaB-like helicase C terminal domain N7988_27190 PF00772 DnaB-like helicase N terminal domain N7988_27195 PF03948 Ribosomal protein L9, C-terminal domain N7988_27195 PF01281 Ribosomal protein L9, N-terminal domain N7988_27200 PF01368 DHH family N7988_27200 PF02272 DHHA1 domain N7988_27205 PF09991 Predicted membrane protein (DUF2232) N7988_27210 PF01084 Ribosomal protein S18 N7988_27215 PF00436 Single-strand binding protein family N7988_27220 PF01250 Ribosomal protein S6 N7988_27225 PF01926 50S ribosome-binding GTPase N7988_27225 PF06071 Protein of unknown function (DUF933) N7988_27230 PF06107 Bacterial protein of unknown function (DUF951) N7988_27235 PF00924 Mechanosensitive ion channel N7988_27240 PF06866 Protein of unknown function (DUF1256) N7988_27245 PF17762 HTH domain found in ParB protein N7988_27245 PF02195 ParB-like nuclease domain N7988_27250 PF13614 AAA domain N7988_27255 PF17762 HTH domain found in ParB protein N7988_27255 PF02195 ParB-like nuclease domain N7988_27260 PF02527 rRNA small subunit methyltransferase G N7988_27265 PF01134 Glucose inhibited division protein A N7988_27265 PF13932 GidA associated domain N7988_27270 PF01926 50S ribosome-binding GTPase N7988_27270 PF12631 MnmE helical domain N7988_27270 PF10396 GTP-binding protein TrmE N-terminus N7988_27275 PF14804 Jag N-terminus N7988_27275 PF01424 R3H domain N7988_27280 PF02096 60Kd inner membrane protein N7988_27285 PF00825 Ribonuclease P N7988_27290 PF00468 Ribosomal protein L34 N7988_27305 PF01580 FtsK/SpoIIIE family N7988_27305 PF09397 Ftsk gamma domain N7988_27305 PF17854 FtsK alpha domain N7988_27345 PF07282 Putative transposase DNA-binding domain N7988_27345 PF01385 Probable transposase N7988_27345 PF12323 Helix-turn-helix domain N7988_27435 PF00672 HAMP domain N7988_27435 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N7988_27440 PF00269 Small, acid-soluble spore proteins, alpha/beta type N7988_27465 PF18801 response regulator aspartate phosphatase H, N terminal N7988_27480 PF06414 Zeta toxin N7988_27515 PF00535 Glycosyl transferase family 2 N7988_27525 PF00664 ABC transporter transmembrane region N7988_27525 PF00005 ABC transporter N7988_27525 PF03412 Peptidase C39 family N7988_27570 PF04225 Opacity-associated protein A LysM-like domain N7988_27570 PF01551 Peptidase family M23 N7988_27575 PF01510 N-acetylmuramoyl-L-alanine amidase N7988_27575 PF01471 Putative peptidoglycan binding domain N7988_27575 PF01476 LysM domain N7988_27590 PF01510 N-acetylmuramoyl-L-alanine amidase N7988_27625 PF01385 Probable transposase N7988_27625 PF12323 Helix-turn-helix domain N7988_27625 PF07282 Putative transposase DNA-binding domain N7988_27690 PF04740 LXG domain of WXG superfamily N7988_27690 PF14436 Bacterial EndoU nuclease N7988_27725 PF12323 Helix-turn-helix domain N7988_27725 PF01385 Probable transposase N7988_27725 PF07282 Putative transposase DNA-binding domain N7988_27735 PF00395 S-layer homology domain N7988_27735 PF01520 N-acetylmuramoyl-L-alanine amidase N7988_27740 PF01381 Helix-turn-helix N7988_27750 PF01522 Polysaccharide deacetylase N7988_27790 PF00005 ABC transporter N7988_27845 PF01609 Transposase DDE domain N7988_27850 PF00486 Transcriptional regulatory protein, C terminal N7988_27850 PF00072 Response regulator receiver domain N7988_27855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N7988_27860 PF00005 ABC transporter N7988_27865 PF02687 FtsX-like permease family N7988_27890 PF01037 Lrp/AsnC ligand binding domain N7988_27895 PF12706 Beta-lactamase superfamily domain N7988_27900 PF13302 Acetyltransferase (GNAT) domain N7988_27905 PF00216 Bacterial DNA-binding protein N7988_27940 PF12323 Helix-turn-helix domain N7988_27940 PF01385 Probable transposase N7988_27940 PF07282 Putative transposase DNA-binding domain N7988_27960 PF00202 Aminotransferase class-III N7988_27970 PF00107 Zinc-binding dehydrogenase N7988_27970 PF08240 Alcohol dehydrogenase GroES-like domain N7988_27995 PF18801 response regulator aspartate phosphatase H, N terminal N7988_27995 PF17874 MalT-like TPR region N7988_28015 PF00264 Common central domain of tyrosinase N7988_28020 PF10042 Uncharacterized conserved protein (DUF2278) N7988_28045 PF12102 Domain of unknown function (DUF3578) N7988_28045 PF07728 AAA domain (dynein-related subfamily) N7988_28105 PF14659 Phage integrase, N-terminal SAM-like domain N7988_28105 PF00589 Phage integrase family N7988_28135 PF06114 IrrE N-terminal-like domain N7988_28135 PF01381 Helix-turn-helix N7988_28135 PF09856 Predicted transcriptional regulator (DUF2083) N7988_28150 PF01381 Helix-turn-helix N7988_28165 PF07690 Major Facilitator Superfamily N7988_28170 PF00378 Enoyl-CoA hydratase/isomerase N7988_28175 PF00535 Glycosyl transferase family 2 N7988_28180 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family N7988_28185 PF00132 Bacterial transferase hexapeptide (six repeats) N7988_28190 PF03009 Glycerophosphoryl diester phosphodiesterase family N7988_28230 PF18801 response regulator aspartate phosphatase H, N terminal N7988_28245 PF03707 Bacterial signalling protein N terminal repeat N7988_28245 PF00563 EAL domain N7988_28245 PF00990 Diguanylate cyclase, GGDEF domain N7988_28250 PF07282 Putative transposase DNA-binding domain N7988_28250 PF01385 Probable transposase N7988_28250 PF12323 Helix-turn-helix domain N7988_28280 PF00005 ABC transporter N7988_28290 PF00589 Phage integrase family N7988_28300 PF00817 impB/mucB/samB family N7988_28300 PF11799 impB/mucB/samB family C-terminal domain N7988_28300 PF11798 IMS family HHH motif N7988_28310 PF12323 Helix-turn-helix domain N7988_28310 PF01385 Probable transposase N7988_28310 PF07282 Putative transposase DNA-binding domain N7988_28335 PF08378 Nuclease-related domain N7988_28340 PF02677 Epoxyqueuosine reductase QueH N7988_28355 PF00953 Glycosyl transferase family 4 N7988_28355 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 N7988_28360 PF02600 Disulfide bond formation protein DsbB N7988_28365 PF01022 Bacterial regulatory protein, arsR family N7988_28370 PF05593 RHS Repeat N7988_28395 PF12323 Helix-turn-helix domain N7988_28395 PF01385 Probable transposase N7988_28395 PF07282 Putative transposase DNA-binding domain N7988_28400 PF01022 Bacterial regulatory protein, arsR family N7988_28405 PF00293 NUDIX domain N7988_28440 PF01385 Probable transposase N7988_28440 PF07282 Putative transposase DNA-binding domain N7988_28440 PF12323 Helix-turn-helix domain N7988_28470 PF12323 Helix-turn-helix domain N7988_28470 PF01385 Probable transposase N7988_28470 PF07282 Putative transposase DNA-binding domain N7988_28500 PF00005 ABC transporter N7988_28500 PF00664 ABC transporter transmembrane region N7988_28505 PF00664 ABC transporter transmembrane region N7988_28505 PF00005 ABC transporter N7988_28560 PF07282 Putative transposase DNA-binding domain N7988_28560 PF12323 Helix-turn-helix domain N7988_28560 PF01385 Probable transposase N7988_28565 PF01494 FAD binding domain N7988_28585 PF00561 alpha/beta hydrolase fold N7988_28610 PF00202 Aminotransferase class-III N7988_28625 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain N7988_28625 PF00591 Glycosyl transferase family, a/b domain N7988_28625 PF02885 Glycosyl transferase family, helical bundle domain N7988_28630 PF00550 Phosphopantetheine attachment site N7988_28635 PF00501 AMP-binding enzyme N7988_28635 PF13193 AMP-binding enzyme C-terminal domain N7988_28645 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain N7988_28645 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain N7988_28650 PF02668 Taurine catabolism dioxygenase TauD, TfdA family N7988_28655 PF13495 Phage integrase, N-terminal SAM-like domain N7988_28655 PF00589 Phage integrase family N7988_28700 PF18801 response regulator aspartate phosphatase H, N terminal N7988_28710 PF17209 Hfq protein N7988_28715 PF01022 Bacterial regulatory protein, arsR family N7988_28720 PF02600 Disulfide bond formation protein DsbB N7988_28770 PF00005 ABC transporter N7988_28795 PF00583 Acetyltransferase (GNAT) family N7988_28825 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 N7988_28825 PF00535 Glycosyl transferase family 2 N7988_28845 PF00483 Nucleotidyl transferase N7988_28850 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain N7988_28850 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain N7988_28850 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain N7988_28855 PF01370 NAD dependent epimerase/dehydratase family N7988_28860 PF00534 Glycosyl transferases group 1 N7988_28860 PF13439 Glycosyltransferase Family 4 N7988_28880 PF13439 Glycosyltransferase Family 4 N7988_28880 PF00534 Glycosyl transferases group 1 N7988_28885 PF01636 Phosphotransferase enzyme family N7988_28905 PF08453 Peptidase family M9 N-terminal N7988_28905 PF01752 Collagenase N7988_28905 PF18496 Collagenase G catalytic helper subdomain N7988_28915 PF03313 Serine dehydratase alpha chain N7988_28920 PF03315 Serine dehydratase beta chain N7988_28920 PF01842 ACT domain N7988_28925 PF02743 Cache domain N7988_28925 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N7988_28925 PF00672 HAMP domain N7988_28960 PF03965 Penicillinase repressor N7988_28975 PF01510 N-acetylmuramoyl-L-alanine amidase N7988_28975 PF01471 Putative peptidoglycan binding domain N7988_29025 PF00027 Cyclic nucleotide-binding domain N7988_29025 PF01734 Patatin-like phospholipase N7988_29045 PF12323 Helix-turn-helix domain N7988_29045 PF01385 Probable transposase N7988_29045 PF07282 Putative transposase DNA-binding domain N7988_29050 PF00892 EamA-like transporter family N7988_29055 PF00155 Aminotransferase class I and II N7988_29055 PF00392 Bacterial regulatory proteins, gntR family N7988_29065 PF00854 POT family N7988_29085 PF00144 Beta-lactamase N7988_29090 PF00144 Beta-lactamase N7988_29115 PF00005 ABC transporter N7988_29145 PF18801 response regulator aspartate phosphatase H, N terminal N7988_29160 PF18277 AbrB C-terminal domain N7988_29160 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin N7988_29165 PF01609 Transposase DDE domain N7988_29170 PF07690 Major Facilitator Superfamily N7988_29175 PF00440 Bacterial regulatory proteins, tetR family N7988_29175 PF16859 Tetracyclin repressor-like, C-terminal domain N7988_29185 PF01434 Peptidase family M41 N7988_29185 PF17862 AAA+ lid domain N7988_29185 PF00004 ATPase family associated with various cellular activities (AAA) N7988_29200 PF04055 Radical SAM superfamily N7988_29230 PF04235 Protein of unknown function (DUF418) N7988_29235 PF01609 Transposase DDE domain N7988_29250 PF07282 Putative transposase DNA-binding domain N7988_29250 PF01385 Probable transposase N7988_29250 PF12323 Helix-turn-helix domain N7988_29360 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) N7988_29660 PF00091 Tubulin/FtsZ family, GTPase domain N7988_29700 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin N7988_29700 PF18277 AbrB C-terminal domain N7988_29720 PF13344 Haloacid dehalogenase-like hydrolase N7988_29720 PF00293 NUDIX domain N7988_29730 PF03551 Transcriptional regulator PadR-like family N7988_29770 PF12389 Camelysin metallo-endopeptidase N7988_29775 PF00817 impB/mucB/samB family N7988_29775 PF11799 impB/mucB/samB family C-terminal domain N7988_29775 PF11798 IMS family HHH motif N7988_29805 PF00486 Transcriptional regulatory protein, C terminal N7988_29805 PF00072 Response regulator receiver domain N7988_29810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N7988_29815 PF00005 ABC transporter N7988_29820 PF02687 FtsX-like permease family N7988_29840 PF08281 Sigma-70, region 4 N7988_29840 PF04542 Sigma-70 region 2 N7988_29850 PF03717 Penicillin-binding Protein dimerisation domain N7988_29850 PF00905 Penicillin binding protein transpeptidase domain N7988_29880 PF01098 Cell cycle protein N7988_29910 PF01609 Transposase DDE domain N7988_29915 PF13419 Haloacid dehalogenase-like hydrolase N7988_29920 PF00455 DeoR C terminal sensor domain N7988_29920 PF08220 DeoR-like helix-turn-helix domain N7988_29925 PF12704 MacB-like periplasmic core domain N7988_29925 PF02687 FtsX-like permease family N7988_29960 PF12802 MarR family N7988_29995 PF03323 Bacillus/Clostridium GerA spore germination protein N7988_30005 PF05525 Branched-chain amino acid transport protein N7988_30010 PF01235 Sodium:alanine symporter family N7988_30015 PF04960 Glutaminase N7988_30040 PF14307 Glycosyltransferase WbsX N7988_30040 PF05045 Rhamnan synthesis protein F N7988_30045 PF00005 ABC transporter N7988_30060 PF00698 Acyl transferase domain N7988_30070 PF00550 Phosphopantetheine attachment site N7988_30075 PF07977 FabA-like domain N7988_30090 PF08669 Glycine cleavage T-protein C-terminal barrel domain N7988_30090 PF01571 Aminomethyltransferase folate-binding domain N7988_30095 PF02801 Beta-ketoacyl synthase, C-terminal domain N7988_30095 PF00109 Beta-ketoacyl synthase, N-terminal domain N7988_30100 PF00483 Nucleotidyl transferase N7988_30105 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase N7988_30110 PF16363 GDP-mannose 4,6 dehydratase N7988_30115 PF04321 RmlD substrate binding domain N7988_30120 PF07690 Major Facilitator Superfamily N7988_30125 PF16859 Tetracyclin repressor-like, C-terminal domain N7988_30125 PF00440 Bacterial regulatory proteins, tetR family N7988_30130 PF05163 DinB family N7988_30140 PF00269 Small, acid-soluble spore proteins, alpha/beta type N7988_30150 PF00072 Response regulator receiver domain N7988_30150 PF00486 Transcriptional regulatory protein, C terminal N7988_30155 PF16736 Single Cache-like N7988_30155 PF00989 PAS fold N7988_30155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N7988_30155 PF00512 His Kinase A (phospho-acceptor) domain N7988_30160 PF14200 Ricin-type beta-trefoil lectin domain-like N7988_30160 PF01400 Astacin (Peptidase family M12A) N7988_30170 PF00899 ThiF family N7988_30175 PF00899 ThiF family N7988_30175 PF00581 Rhodanese-like domain N7988_30180 PF04284 Protein of unknown function (DUF441) N7988_30190 PF00682 HMGL-like N7988_30215 PF00005 ABC transporter N7988_30250 PF00072 Response regulator receiver domain N7988_30250 PF00486 Transcriptional regulatory protein, C terminal N7988_30255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N7988_30255 PF00512 His Kinase A (phospho-acceptor) domain N7988_30255 PF16736 Single Cache-like N7988_30255 PF00989 PAS fold N7988_30300 PF10842 Protein of unknown function (DUF2642) N7988_30310 PF00589 Phage integrase family N7988_30310 PF13495 Phage integrase, N-terminal SAM-like domain N7988_30315 PF02557 D-alanyl-D-alanine carboxypeptidase N7988_30345 PF01022 Bacterial regulatory protein, arsR family N7988_30355 PF02574 Homocysteine S-methyltransferase N7988_30360 PF00324 Amino acid permease N7988_30365 PF00690 Cation transporter/ATPase, N-terminus N7988_30365 PF00689 Cation transporting ATPase, C-terminus N7988_30370 PF01769 Divalent cation transporter N7988_30370 PF00571 CBS domain N7988_30370 PF03448 MgtE intracellular N domain N7988_30375 PF01238 Phosphomannose isomerase type I N7988_30380 PF02378 Phosphotransferase system, EIIC N7988_30380 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 N7988_30380 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit N7988_30385 PF08279 HTH domain N7988_30385 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 N7988_30385 PF05043 Mga helix-turn-helix domain N7988_30385 PF00874 PRD domain N7988_30390 PF01316 Arginine repressor, DNA binding domain N7988_30390 PF02863 Arginine repressor, C-terminal domain N7988_30415 PF00905 Penicillin binding protein transpeptidase domain N7988_30415 PF00912 Transglycosylase N7988_30420 PF00291 Pyridoxal-phosphate dependent enzyme N7988_30425 PF01262 Alanine dehydrogenase/PNT, C-terminal domain N7988_30425 PF05222 Alanine dehydrogenase/PNT, N-terminal domain N7988_30435 PF09397 Ftsk gamma domain N7988_30435 PF01580 FtsK/SpoIIIE family N7988_30435 PF17854 FtsK alpha domain N7988_30450 PF00704 Glycosyl hydrolases family 18 N7988_30450 PF00041 Fibronectin type III domain N7988_30455 PF00797 N-acetyltransferase N7988_30490 PF00072 Response regulator receiver domain N7988_30490 PF00196 Bacterial regulatory proteins, luxR family N7988_30495 PF00144 Beta-lactamase N7988_30515 PF00005 ABC transporter N7988_30520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N7988_30520 PF00512 His Kinase A (phospho-acceptor) domain N7988_30525 PF00486 Transcriptional regulatory protein, C terminal N7988_30525 PF00072 Response regulator receiver domain N7988_30530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N7988_30535 PF00486 Transcriptional regulatory protein, C terminal N7988_30535 PF00072 Response regulator receiver domain N7988_30540 PF02687 FtsX-like permease family N7988_30545 PF00005 ABC transporter N7988_30565 PF01925 Sulfite exporter TauE/SafE N7988_30580 PF17209 Hfq protein N7988_30590 PF18277 AbrB C-terminal domain N7988_30590 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin N7988_30605 PF02687 FtsX-like permease family N7988_30630 PF01510 N-acetylmuramoyl-L-alanine amidase N7988_30630 PF01476 LysM domain N7988_30630 PF01471 Putative peptidoglycan binding domain N7988_30640 PF03613 PTS system mannose/fructose/sorbose family IID component N7988_30645 PF03609 PTS system sorbose-specific iic component N7988_30650 PF03610 PTS system fructose IIA component N7988_30650 PF03830 PTS system sorbose subfamily IIB component N7988_30655 PF00230 Major intrinsic protein N7988_30660 PF00381 PTS HPr component phosphorylation site N7988_30665 PF02734 DAK2 domain N7988_30670 PF02733 Dak1 domain N7988_30675 PF13185 GAF domain N7988_30675 PF02954 Bacterial regulatory protein, Fis family N7988_30675 PF00158 Sigma-54 interaction domain N7988_30680 PF00465 Iron-containing alcohol dehydrogenase N7988_30685 PF02839 Carbohydrate binding domain N7988_30695 PF00392 Bacterial regulatory proteins, gntR family N7988_30695 PF00155 Aminotransferase class I and II N7988_30700 PF00005 ABC transporter N7988_30715 PF00388 Phosphatidylinositol-specific phospholipase C, X domain N7988_30720 PF01385 Probable transposase N7988_30720 PF12323 Helix-turn-helix domain N7988_30720 PF07282 Putative transposase DNA-binding domain N7988_30730 PF00216 Bacterial DNA-binding protein N7988_30735 PF00005 ABC transporter N7988_30740 PF12704 MacB-like periplasmic core domain N7988_30740 PF02687 FtsX-like permease family N7988_30750 PF00005 ABC transporter N7988_30755 PF12704 MacB-like periplasmic core domain N7988_30755 PF02687 FtsX-like permease family N7988_30760 PF13180 PDZ domain N7988_30770 PF00486 Transcriptional regulatory protein, C terminal N7988_30770 PF00072 Response regulator receiver domain N7988_30775 PF16736 Single Cache-like N7988_30775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N7988_30775 PF00512 His Kinase A (phospho-acceptor) domain N7988_30775 PF00989 PAS fold N7988_30785 PF03060 Nitronate monooxygenase N7988_30810 PF00082 Subtilase family N7988_30820 PF13520 Amino acid permease N7988_30825 PF00291 Pyridoxal-phosphate dependent enzyme N7988_30830 PF05222 Alanine dehydrogenase/PNT, N-terminal domain N7988_30830 PF01262 Alanine dehydrogenase/PNT, C-terminal domain N7988_30835 PF13520 Amino acid permease N7988_30845 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain N7988_30845 PF00056 lactate/malate dehydrogenase, NAD binding domain N7988_30850 PF01226 Formate/nitrite transporter N7988_30855 PF04324 BFD-like [2Fe-2S] binding domain N7988_30855 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain N7988_30855 PF07992 Pyridine nucleotide-disulphide oxidoreductase N7988_30855 PF18267 Rubredoxin NAD+ reductase C-terminal domain N7988_30860 PF13529 Peptidase_C39 like family N7988_30865 PF07282 Putative transposase DNA-binding domain N7988_30865 PF01385 Probable transposase N7988_30865 PF12323 Helix-turn-helix domain N7988_30875 PF13597 Anaerobic ribonucleoside-triphosphate reductase N7988_30875 PF03477 ATP cone domain N7988_30885 PF04055 Radical SAM superfamily N7988_30885 PF13186 Iron-sulfur cluster-binding domain N7988_30895 PF00171 Aldehyde dehydrogenase family N7988_30895 PF00465 Iron-containing alcohol dehydrogenase