locus-tag class description HLK66_00005 PF00308 Bacterial dnaA protein HLK66_00005 PF11638 DnaA N-terminal domain HLK66_00005 PF08299 Bacterial dnaA protein helix-turn-helix HLK66_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain HLK66_00010 PF02767 DNA polymerase III beta subunit, central domain HLK66_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain HLK66_00020 PF02463 RecF/RecN/SMC N terminal domain HLK66_00025 PF04025 Domain of unknown function (DUF370) HLK66_00030 PF00204 DNA gyrase B HLK66_00030 PF01751 Toprim domain HLK66_00030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HLK66_00030 PF00986 DNA gyrase B subunit, carboxyl terminus HLK66_00035 PF03989 DNA gyrase C-terminal domain, beta-propeller HLK66_00035 PF00521 DNA gyrase/topoisomerase IV, subunit A HLK66_00040 PF01966 HD domain HLK66_00075 PF00571 CBS domain HLK66_00075 PF00478 IMP dehydrogenase / GMP reductase domain HLK66_00080 PF07943 Penicillin-binding protein 5, C-terminal domain HLK66_00080 PF00768 D-alanyl-D-alanine carboxypeptidase HLK66_00085 PF01680 SOR/SNZ family HLK66_00090 PF01174 SNO glutamine amidotransferase family HLK66_00105 PF01712 Deoxynucleoside kinase HLK66_00110 PF01712 Deoxynucleoside kinase HLK66_00115 PF02581 Thiamine monophosphate synthase HLK66_00120 PF01266 FAD dependent oxidoreductase HLK66_00125 PF02597 ThiS family HLK66_00130 PF05690 Thiazole biosynthesis protein ThiG HLK66_00135 PF00899 ThiF family HLK66_00140 PF00704 Glycosyl hydrolases family 18 HLK66_00140 PF01476 LysM domain HLK66_00145 PF00857 Isochorismatase family HLK66_00150 PF14437 MafB19-like deaminase HLK66_00160 PF12169 DNA polymerase III subunits gamma and tau domain III HLK66_00165 PF02575 YbaB/EbfC DNA-binding family HLK66_00170 PF02132 RecR protein HLK66_00170 PF13662 Toprim domain HLK66_00175 PF10704 Protein of unknown function (DUF2508) HLK66_00180 PF07441 SigmaK-factor processing regulatory protein BofA HLK66_00210 PF10764 Inhibitor of sigma-G Gin HLK66_00215 PF01276 Orn/Lys/Arg decarboxylase, major domain HLK66_00215 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain HLK66_00220 PF02223 Thymidylate kinase HLK66_00225 PF06153 Cyclic-di-AMP receptor HLK66_00230 PF03885 Protein of unknown function (DUF327) HLK66_00235 PF09115 DNA polymerase III, delta subunit, C terminal HLK66_00240 PF04468 PSP1 C-terminal conserved region HLK66_00245 PF06156 Initiation control protein YabA HLK66_00250 PF05175 Methyltransferase small domain HLK66_00255 PF01541 GIY-YIG catalytic domain HLK66_00260 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HLK66_00265 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin HLK66_00265 PF18277 AbrB C-terminal domain HLK66_00270 PF01588 Putative tRNA binding domain HLK66_00270 PF09334 tRNA synthetases class I (M) HLK66_00270 PF08264 Anticodon-binding domain of tRNA HLK66_00275 PF01026 TatD related DNase HLK66_00280 PF06725 3D domain HLK66_00280 PF03990 G5-linked-Ubiquitin-like domain HLK66_00280 PF07501 G5 domain HLK66_00285 PF13662 Toprim domain HLK66_00285 PF13331 Domain of unknown function (DUF4093) HLK66_00290 PF00398 Ribosomal RNA adenine dimethylase HLK66_00295 PF05582 YabG peptidase U57 HLK66_00300 PF06257 Biofilm formation stimulator VEG HLK66_00305 PF00269 Small, acid-soluble spore proteins, alpha/beta type HLK66_00310 PF00288 GHMP kinases N terminal domain HLK66_00310 PF08544 GHMP kinases C terminal HLK66_00315 PF00156 Phosphoribosyl transferase domain HLK66_00315 PF09182 Bacterial purine repressor, N-terminal HLK66_00320 PF01042 Endoribonuclease L-PSP HLK66_00325 PF04026 SpoVG HLK66_00330 PF00483 Nucleotidyl transferase HLK66_00330 PF00132 Bacterial transferase hexapeptide (six repeats) HLK66_00335 PF14572 Phosphoribosyl synthetase-associated domain HLK66_00335 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase HLK66_00340 PF14693 Ribosomal protein TL5, C-terminal domain HLK66_00340 PF01386 Ribosomal L25p family HLK66_00345 PF01195 Peptidyl-tRNA hydrolase HLK66_00350 PF10955 Protein of unknown function (DUF2757) HLK66_00355 PF02559 CarD-like/TRCF domain HLK66_00355 PF17757 UvrB interaction domain HLK66_00355 PF00271 Helicase conserved C-terminal domain HLK66_00355 PF03461 TRCF domain HLK66_00355 PF00270 DEAD/DEAH box helicase HLK66_00360 PF15714 Stage V sporulation protein T C-terminal, transcription factor HLK66_00360 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin HLK66_00365 PF00392 Bacterial regulatory proteins, gntR family HLK66_00365 PF07702 UTRA domain HLK66_00375 PF01943 Polysaccharide biosynthesis protein HLK66_00375 PF14667 Polysaccharide biosynthesis C-terminal domain HLK66_00380 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HLK66_00380 PF03819 MazG nucleotide pyrophosphohydrolase domain HLK66_00385 PF01479 S4 domain HLK66_00390 PF07873 YabP family HLK66_00395 PF09578 Spore cortex protein YabQ (Spore_YabQ) HLK66_00400 PF04977 Septum formation initiator HLK66_00405 PF00575 S1 RNA binding domain HLK66_00415 PF07228 Stage II sporulation protein E (SpoIIE) HLK66_00420 PF00092 von Willebrand factor type A domain HLK66_00425 PF00069 Protein kinase domain HLK66_00430 PF09179 TilS substrate binding domain HLK66_00430 PF11734 TilS substrate C-terminal domain HLK66_00430 PF01171 PP-loop family HLK66_00445 PF03309 Type III pantothenate kinase HLK66_00450 PF01430 Hsp33 protein HLK66_00455 PF00291 Pyridoxal-phosphate dependent enzyme HLK66_00460 PF00425 chorismate binding enzyme HLK66_00460 PF04715 Anthranilate synthase component I, N terminal region HLK66_00465 PF00117 Glutamine amidotransferase class-I HLK66_00470 PF01063 Amino-transferase class IV HLK66_00475 PF00809 Pterin binding enzyme HLK66_00480 PF02152 Dihydroneopterin aldolase HLK66_00485 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) HLK66_00490 PF01381 Helix-turn-helix HLK66_00495 PF01207 Dihydrouridine synthase (Dus) HLK66_00500 PF01336 OB-fold nucleic acid binding domain HLK66_00500 PF00152 tRNA synthetases class II (D, K and N) HLK66_00580 PF17727 CtsR C-terminal dimerization domain HLK66_00580 PF05848 CtsR N-terminal HTH domain HLK66_00585 PF02151 UvrB/uvrC motif HLK66_00590 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain HLK66_00595 PF00004 ATPase family associated with various cellular activities (AAA) HLK66_00595 PF10431 C-terminal, D2-small domain, of ClpB protein HLK66_00595 PF02861 Clp amino terminal domain, pathogenicity island component HLK66_00595 PF17871 AAA lid domain HLK66_00595 PF07724 AAA domain (Cdc48 subfamily) HLK66_00600 PF18073 Rubredoxin metal binding domain HLK66_00610 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase HLK66_00615 PF02542 YgbB family HLK66_00620 PF00749 tRNA synthetases class I (E and Q), catalytic domain HLK66_00625 PF00132 Bacterial transferase hexapeptide (six repeats) HLK66_00630 PF09190 DALR domain HLK66_00630 PF01406 tRNA synthetases class I (C) catalytic domain HLK66_00635 PF00636 Ribonuclease III domain HLK66_00640 PF08032 RNA 2'-O ribose methyltransferase substrate binding HLK66_00640 PF00588 SpoU rRNA Methylase family HLK66_00645 PF05991 YacP-like NYN domain HLK66_00650 PF04542 Sigma-70 region 2 HLK66_00650 PF08281 Sigma-70, region 4 HLK66_00655 PF00471 Ribosomal protein L33 HLK66_00660 PF00584 SecE/Sec61-gamma subunits of protein translocation complex HLK66_00665 PF00467 KOW motif HLK66_00665 PF02357 Transcription termination factor nusG HLK66_00670 PF03946 Ribosomal protein L11, N-terminal domain HLK66_00670 PF00298 Ribosomal protein L11, RNA binding domain HLK66_00675 PF00687 Ribosomal protein L1p/L10e family HLK66_00680 PF00466 Ribosomal protein L10 HLK66_00685 PF16320 Ribosomal protein L7/L12 dimerisation domain HLK66_00685 PF00542 Ribosomal protein L7/L12 C-terminal domain HLK66_00690 PF05175 Methyltransferase small domain HLK66_00695 PF00562 RNA polymerase Rpb2, domain 6 HLK66_00695 PF10385 RNA polymerase beta subunit external 1 domain HLK66_00695 PF04565 RNA polymerase Rpb2, domain 3 HLK66_00695 PF04561 RNA polymerase Rpb2, domain 2 HLK66_00695 PF04563 RNA polymerase beta subunit HLK66_00695 PF04560 RNA polymerase Rpb2, domain 7 HLK66_00700 PF04998 RNA polymerase Rpb1, domain 5 HLK66_00700 PF04983 RNA polymerase Rpb1, domain 3 HLK66_00700 PF05000 RNA polymerase Rpb1, domain 4 HLK66_00700 PF00623 RNA polymerase Rpb1, domain 2 HLK66_00700 PF04997 RNA polymerase Rpb1, domain 1 HLK66_00705 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family HLK66_00710 PF00164 Ribosomal protein S12/S23 HLK66_00715 PF00177 Ribosomal protein S7p/S5e HLK66_00720 PF03144 Elongation factor Tu domain 2 HLK66_00720 PF00009 Elongation factor Tu GTP binding domain HLK66_00720 PF14492 Elongation Factor G, domain II HLK66_00720 PF00679 Elongation factor G C-terminus HLK66_00720 PF03764 Elongation factor G, domain IV HLK66_00725 PF03144 Elongation factor Tu domain 2 HLK66_00725 PF00009 Elongation factor Tu GTP binding domain HLK66_00725 PF03143 Elongation factor Tu C-terminal domain HLK66_00730 PF00338 Ribosomal protein S10p/S20e HLK66_00735 PF00297 Ribosomal protein L3 HLK66_00740 PF00573 Ribosomal protein L4/L1 family HLK66_00745 PF00276 Ribosomal protein L23 HLK66_00750 PF03947 Ribosomal Proteins L2, C-terminal domain HLK66_00750 PF00181 Ribosomal Proteins L2, RNA binding domain HLK66_00755 PF00203 Ribosomal protein S19 HLK66_00760 PF00237 Ribosomal protein L22p/L17e HLK66_00765 PF07650 KH domain HLK66_00765 PF00189 Ribosomal protein S3, C-terminal domain HLK66_00770 PF00252 Ribosomal protein L16p/L10e HLK66_00775 PF00831 Ribosomal L29 protein HLK66_00780 PF00366 Ribosomal protein S17 HLK66_00785 PF00238 Ribosomal protein L14p/L23e HLK66_00790 PF00467 KOW motif HLK66_00790 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 HLK66_00795 PF00673 ribosomal L5P family C-terminus HLK66_00795 PF00281 Ribosomal protein L5 HLK66_00800 PF00253 Ribosomal protein S14p/S29e HLK66_00805 PF00410 Ribosomal protein S8 HLK66_00810 PF00347 Ribosomal protein L6 HLK66_00815 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast HLK66_00820 PF00333 Ribosomal protein S5, N-terminal domain HLK66_00820 PF03719 Ribosomal protein S5, C-terminal domain HLK66_00825 PF00327 Ribosomal protein L30p/L7e HLK66_00830 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A HLK66_00835 PF00344 SecY translocase HLK66_00840 PF05191 Adenylate kinase, active site lid HLK66_00845 PF01176 Translation initiation factor 1A / IF-1 HLK66_00850 PF00444 Ribosomal protein L36 HLK66_00855 PF00416 Ribosomal protein S13/S18 HLK66_00860 PF00411 Ribosomal protein S11 HLK66_00865 PF01000 RNA polymerase Rpb3/RpoA insert domain HLK66_00865 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain HLK66_00865 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain HLK66_00870 PF01196 Ribosomal protein L17 HLK66_00875 PF00005 ABC transporter HLK66_00880 PF00005 ABC transporter HLK66_00885 PF02361 Cobalt transport protein HLK66_00890 PF01416 tRNA pseudouridine synthase HLK66_00895 PF00572 Ribosomal protein L13 HLK66_00900 PF00380 Ribosomal protein S9/S16 HLK66_00905 PF00589 Phage integrase family HLK66_00925 PF17854 FtsK alpha domain HLK66_00925 PF09397 Ftsk gamma domain HLK66_00925 PF01580 FtsK/SpoIIIE family HLK66_00955 PF00232 Glycosyl hydrolase family 1 HLK66_00960 PF02378 Phosphotransferase system, EIIC HLK66_00960 PF00367 phosphotransferase system, EIIB HLK66_00960 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 HLK66_00970 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 HLK66_01010 PF01520 N-acetylmuramoyl-L-alanine amidase HLK66_01015 PF10609 NUBPL iron-transfer P-loop NTPase HLK66_01020 PF17898 Spore germination GerD central core domain HLK66_01025 PF01522 Polysaccharide deacetylase HLK66_01090 PF00491 Arginase family HLK66_01100 PF04542 Sigma-70 region 2 HLK66_01100 PF08281 Sigma-70, region 4 HLK66_01105 PF13490 Putative zinc-finger HLK66_01110 PF02457 DisA bacterial checkpoint controller nucleotide-binding HLK66_01115 PF07949 YbbR-like protein HLK66_01120 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HLK66_01120 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HLK66_01120 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HLK66_01120 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HLK66_01125 PF01380 SIS domain HLK66_01150 PF01047 MarR family HLK66_01165 PF00881 Nitroreductase family HLK66_01180 PF00486 Transcriptional regulatory protein, C terminal HLK66_01180 PF00072 Response regulator receiver domain HLK66_01185 PF00512 His Kinase A (phospho-acceptor) domain HLK66_01185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HLK66_01190 PF12704 MacB-like periplasmic core domain HLK66_01190 PF02687 FtsX-like permease family HLK66_01190 PF00005 ABC transporter HLK66_01210 PF00072 Response regulator receiver domain HLK66_01210 PF00486 Transcriptional regulatory protein, C terminal HLK66_01215 PF00672 HAMP domain HLK66_01215 PF00512 His Kinase A (phospho-acceptor) domain HLK66_01220 PF00005 ABC transporter HLK66_01235 PF01638 HxlR-like helix-turn-helix HLK66_01240 PF08240 Alcohol dehydrogenase GroES-like domain HLK66_01240 PF00107 Zinc-binding dehydrogenase HLK66_01245 PF00171 Aldehyde dehydrogenase family HLK66_01255 PF00107 Zinc-binding dehydrogenase HLK66_01255 PF08240 Alcohol dehydrogenase GroES-like domain HLK66_01260 PF03608 PTS system enzyme II sorbitol-specific factor HLK66_01265 PF03612 Sorbitol phosphotransferase enzyme II N-terminus HLK66_01265 PF07663 Sorbitol phosphotransferase enzyme II C-terminus HLK66_01270 PF03829 PTS system glucitol/sorbitol-specific IIA component HLK66_01280 PF00248 Aldo/keto reductase family HLK66_01290 PF07702 UTRA domain HLK66_01290 PF00392 Bacterial regulatory proteins, gntR family HLK66_01295 PF03830 PTS system sorbose subfamily IIB component HLK66_01295 PF03610 PTS system fructose IIA component HLK66_01300 PF03830 PTS system sorbose subfamily IIB component HLK66_01300 PF03610 PTS system fructose IIA component HLK66_01310 PF03613 PTS system mannose/fructose/sorbose family IID component HLK66_01315 PF07690 Major Facilitator Superfamily HLK66_01320 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) HLK66_01340 PF07690 Major Facilitator Superfamily HLK66_01350 PF01497 Periplasmic binding protein HLK66_01355 PF01032 FecCD transport family HLK66_01360 PF01032 FecCD transport family HLK66_01365 PF00005 ABC transporter HLK66_01370 PF02386 Cation transport protein HLK66_01380 PF01925 Sulfite exporter TauE/SafE HLK66_01390 PF04439 Streptomycin adenylyltransferase HLK66_01395 PF13686 DsrE/DsrF/DrsH-like family HLK66_01405 PF05525 Branched-chain amino acid transport protein HLK66_01410 PF08279 HTH domain HLK66_01410 PF13280 WYL domain HLK66_01420 PF00117 Glutamine amidotransferase class-I HLK66_01420 PF00958 GMP synthase C terminal domain HLK66_01420 PF13673 Acetyltransferase (GNAT) domain HLK66_01420 PF13302 Acetyltransferase (GNAT) domain HLK66_01420 PF03352 Methyladenine glycosylase HLK66_01425 PF16360 GTP-binding GTPase Middle Region HLK66_01425 PF13167 GTP-binding GTPase N-terminal HLK66_01425 PF01926 50S ribosome-binding GTPase HLK66_01435 PF08281 Sigma-70, region 4 HLK66_01435 PF04542 Sigma-70 region 2 HLK66_01440 PF07992 Pyridine nucleotide-disulphide oxidoreductase HLK66_01455 PF00583 Acetyltransferase (GNAT) family HLK66_01480 PF08281 Sigma-70, region 4 HLK66_01480 PF04542 Sigma-70 region 2 HLK66_01490 PF03816 Cell envelope-related transcriptional attenuator domain HLK66_01500 PF00583 Acetyltransferase (GNAT) family HLK66_01505 PF02525 Flavodoxin-like fold HLK66_01525 PF13419 Haloacid dehalogenase-like hydrolase HLK66_01535 PF00356 Bacterial regulatory proteins, lacI family HLK66_01540 PF13416 Bacterial extracellular solute-binding protein HLK66_01545 PF00528 Binding-protein-dependent transport system inner membrane component HLK66_01550 PF00528 Binding-protein-dependent transport system inner membrane component HLK66_01555 PF02449 Beta-galactosidase HLK66_01555 PF08532 Beta-galactosidase trimerisation domain HLK66_01555 PF08533 Beta-galactosidase C-terminal domain HLK66_01570 PF01077 Nitrite and sulphite reductase 4Fe-4S domain HLK66_01570 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain HLK66_01575 PF00667 FAD binding domain HLK66_01575 PF00258 Flavodoxin HLK66_01575 PF00175 Oxidoreductase NAD-binding domain HLK66_01580 PF03466 LysR substrate binding domain HLK66_01580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HLK66_01595 PF01507 Phosphoadenosine phosphosulfate reductase family HLK66_01600 PF01384 Phosphate transporter family HLK66_01605 PF14306 PUA-like domain HLK66_01605 PF01747 ATP-sulfurylase HLK66_01615 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HLK66_01620 PF01903 CbiX HLK66_01625 PF14824 Sirohaem biosynthesis protein central HLK66_01635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HLK66_01635 PF00512 His Kinase A (phospho-acceptor) domain HLK66_01635 PF09308 LuxQ, periplasmic HLK66_01635 PF00072 Response regulator receiver domain HLK66_01640 PF13426 PAS domain HLK66_01640 PF00989 PAS fold HLK66_01640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HLK66_01640 PF00512 His Kinase A (phospho-acceptor) domain HLK66_01640 PF13188 PAS domain HLK66_01650 PF01047 MarR family HLK66_01655 PF08240 Alcohol dehydrogenase GroES-like domain HLK66_01655 PF00107 Zinc-binding dehydrogenase HLK66_01665 PF08264 Anticodon-binding domain of tRNA HLK66_01665 PF00133 tRNA synthetases class I (I, L, M and V) HLK66_01675 PF13249 Squalene-hopene cyclase N-terminal domain HLK66_01675 PF13243 Squalene-hopene cyclase C-terminal domain HLK66_01680 PF00152 tRNA synthetases class II (D, K and N) HLK66_01680 PF01336 OB-fold nucleic acid binding domain HLK66_01685 PF08450 SMP-30/Gluconolactonase/LRE-like region HLK66_01695 PF01740 STAS domain HLK66_01695 PF00916 Sulfate permease family HLK66_01700 PF00239 Resolvase, N terminal domain HLK66_01700 PF02796 Helix-turn-helix domain of resolvase HLK66_01705 PF01381 Helix-turn-helix HLK66_01710 PF11975 Family 4 glycosyl hydrolase C-terminal domain HLK66_01710 PF02056 Family 4 glycosyl hydrolase HLK66_01715 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 HLK66_01715 PF02378 Phosphotransferase system, EIIC HLK66_01715 PF00367 phosphotransferase system, EIIB HLK66_01720 PF01380 SIS domain HLK66_01720 PF01418 Helix-turn-helix domain, rpiR family HLK66_01735 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HLK66_01740 PF02378 Phosphotransferase system, EIIC HLK66_01755 PF00872 Transposase, Mutator family HLK66_01765 PF00528 Binding-protein-dependent transport system inner membrane component HLK66_01775 PF00701 Dihydrodipicolinate synthetase family HLK66_01800 PF00348 Polyprenyl synthetase HLK66_01810 PF07992 Pyridine nucleotide-disulphide oxidoreductase HLK66_01815 PF02424 ApbE family HLK66_01825 PF00005 ABC transporter HLK66_01830 PF00005 ABC transporter HLK66_01835 PF02361 Cobalt transport protein HLK66_01840 PF02397 Bacterial sugar transferase HLK66_01845 PF01943 Polysaccharide biosynthesis protein HLK66_01845 PF14667 Polysaccharide biosynthesis C-terminal domain HLK66_01850 PF00534 Glycosyl transferases group 1 HLK66_01850 PF13439 Glycosyltransferase Family 4 HLK66_01855 PF16363 GDP-mannose 4,6 dehydratase HLK66_01860 PF04932 O-Antigen ligase HLK66_01865 PF02706 Chain length determinant protein HLK66_01870 PF00535 Glycosyl transferase family 2 HLK66_01880 PF02082 Transcriptional regulator HLK66_01890 PF17151 Periplasmic sensor domain HLK66_01890 PF00990 Diguanylate cyclase, GGDEF domain HLK66_01900 PF04951 D-aminopeptidase HLK66_01905 PF00528 Binding-protein-dependent transport system inner membrane component HLK66_01910 PF00528 Binding-protein-dependent transport system inner membrane component HLK66_01910 PF12911 N-terminal TM domain of oligopeptide transport permease C HLK66_01915 PF00005 ABC transporter HLK66_01915 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HLK66_01920 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HLK66_01925 PF02016 LD-carboxypeptidase N-terminal domain HLK66_01925 PF17676 LD-carboxypeptidase C-terminal domain HLK66_01930 PF13378 Enolase C-terminal domain-like HLK66_01930 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain HLK66_01935 PF00877 NlpC/P60 family HLK66_01940 PF00005 ABC transporter HLK66_01940 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HLK66_01950 PF00005 ABC transporter HLK66_01955 PF01565 FAD binding domain HLK66_01955 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain HLK66_01965 PF00248 Aldo/keto reductase family HLK66_01970 PF00920 Dehydratase family HLK66_01975 PF01594 AI-2E family transporter HLK66_01980 PF13411 MerR HTH family regulatory protein HLK66_01985 PF01595 Cyclin M transmembrane N-terminal domain HLK66_01985 PF03471 Transporter associated domain HLK66_01985 PF00571 CBS domain HLK66_01990 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HLK66_01990 PF02378 Phosphotransferase system, EIIC HLK66_01995 PF08279 HTH domain HLK66_01995 PF05043 Mga helix-turn-helix domain HLK66_01995 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HLK66_01995 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HLK66_01995 PF00874 PRD domain HLK66_02000 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HLK66_02005 PF08125 Mannitol dehydrogenase C-terminal domain HLK66_02005 PF01232 Mannitol dehydrogenase Rossmann domain HLK66_02010 PF00905 Penicillin binding protein transpeptidase domain HLK66_02010 PF00912 Transglycosylase HLK66_02015 PF02790 Cytochrome C oxidase subunit II, transmembrane domain HLK66_02020 PF00115 Cytochrome C and Quinol oxidase polypeptide I HLK66_02025 PF00510 Cytochrome c oxidase subunit III HLK66_02035 PF01032 FecCD transport family HLK66_02040 PF01032 FecCD transport family HLK66_02045 PF00005 ABC transporter HLK66_02050 PF01497 Periplasmic binding protein HLK66_02055 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HLK66_02055 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HLK66_02060 PF00480 ROK family HLK66_02065 PF00512 His Kinase A (phospho-acceptor) domain HLK66_02065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HLK66_02065 PF00672 HAMP domain HLK66_02070 PF13180 PDZ domain HLK66_02075 PF05698 Bacterial trigger factor protein (TF) C-terminus HLK66_02100 PF08402 TOBE domain HLK66_02100 PF00005 ABC transporter HLK66_02105 PF00528 Binding-protein-dependent transport system inner membrane component HLK66_02110 PF00528 Binding-protein-dependent transport system inner membrane component HLK66_02115 PF13416 Bacterial extracellular solute-binding protein HLK66_02120 PF04748 Divergent polysaccharide deacetylase HLK66_02125 PF05552 Conserved TM helix HLK66_02130 PF02254 TrkA-N domain HLK66_02130 PF02080 TrkA-C domain HLK66_02135 PF00210 Ferritin-like domain HLK66_02140 PF01098 Cell cycle protein HLK66_02145 PF01769 Divalent cation transporter HLK66_02145 PF03448 MgtE intracellular N domain HLK66_02145 PF00571 CBS domain HLK66_02150 PF01979 Amidohydrolase family HLK66_02160 PF03749 Sugar fermentation stimulation protein RE domain HLK66_02160 PF17746 SfsA N-terminal OB domain HLK66_02165 PF01497 Periplasmic binding protein HLK66_02175 PF00005 ABC transporter HLK66_02180 PF03186 CobD/Cbib protein HLK66_02185 PF00155 Aminotransferase class I and II HLK66_02195 PF07685 CobB/CobQ-like glutamine amidotransferase domain HLK66_02200 PF02654 Cobalamin-5-phosphate synthase HLK66_02205 PF00300 Histidine phosphatase superfamily (branch 1) HLK66_02210 PF01923 Cobalamin adenosyltransferase HLK66_02225 PF01820 D-ala D-ala ligase N-terminus HLK66_02225 PF07478 D-ala D-ala ligase C-terminus HLK66_02230 PF01225 Mur ligase family, catalytic domain HLK66_02230 PF02875 Mur ligase family, glutamate ligase domain HLK66_02230 PF08245 Mur ligase middle domain HLK66_02235 PF12146 Serine aminopeptidase, S33 HLK66_02240 PF00271 Helicase conserved C-terminal domain HLK66_02240 PF00270 DEAD/DEAH box helicase HLK66_02245 PF03703 Bacterial PH domain HLK66_02250 PF03703 Bacterial PH domain HLK66_02255 PF01694 Rhomboid family HLK66_02260 PF01648 4'-phosphopantetheinyl transferase superfamily HLK66_02275 PF01402 Ribbon-helix-helix protein, copG family HLK66_02280 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system HLK66_02285 PF01740 STAS domain HLK66_02290 PF13581 Histidine kinase-like ATPase domain HLK66_02295 PF07228 Stage II sporulation protein E (SpoIIE) HLK66_02295 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain HLK66_02300 PF01740 STAS domain HLK66_02305 PF13581 Histidine kinase-like ATPase domain HLK66_02310 PF04539 Sigma-70 region 3 HLK66_02310 PF04542 Sigma-70 region 2 HLK66_02310 PF04545 Sigma-70, region 4 HLK66_02315 PF07228 Stage II sporulation protein E (SpoIIE) HLK66_02320 PF09371 Tex-like protein N-terminal domain HLK66_02320 PF00575 S1 RNA binding domain HLK66_02320 PF17674 HHH domain HLK66_02320 PF16921 Tex protein YqgF-like domain HLK66_02330 PF10263 SprT-like family HLK66_02410 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE HLK66_02415 PF00814 Glycoprotease family HLK66_02420 PF00583 Acetyltransferase (GNAT) family HLK66_02425 PF00814 Glycoprotease family HLK66_02430 PF00005 ABC transporter HLK66_02430 PF12848 ABC transporter HLK66_02430 PF16326 ABC transporter C-terminal domain HLK66_02435 PF01967 MoaC family HLK66_02440 PF02629 CoA binding domain HLK66_02440 PF06971 Putative DNA-binding protein N-terminus HLK66_02450 PF02517 CPBP intramembrane metalloprotease HLK66_02455 PF00166 Chaperonin 10 Kd subunit HLK66_02460 PF00118 TCP-1/cpn60 chaperonin family HLK66_02500 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HLK66_02505 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HLK66_02505 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HLK66_02505 PF02378 Phosphotransferase system, EIIC HLK66_02510 PF02378 Phosphotransferase system, EIIC HLK66_02510 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HLK66_02515 PF00834 Ribulose-phosphate 3 epimerase family HLK66_02520 PF02779 Transketolase, pyrimidine binding domain HLK66_02520 PF00456 Transketolase, thiamine diphosphate binding domain HLK66_02520 PF02780 Transketolase, C-terminal domain HLK66_02530 PF03830 PTS system sorbose subfamily IIB component HLK66_02530 PF03610 PTS system fructose IIA component HLK66_02535 PF03609 PTS system sorbose-specific iic component HLK66_02540 PF03613 PTS system mannose/fructose/sorbose family IID component HLK66_02545 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HLK66_02545 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HLK66_02550 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain HLK66_02550 PF17770 Ribonuclease J C-terminal domain HLK66_02550 PF00753 Metallo-beta-lactamase superfamily HLK66_02555 PF04030 D-arabinono-1,4-lactone oxidase HLK66_02555 PF01565 FAD binding domain HLK66_02570 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HLK66_02570 PF12729 Four helix bundle sensory module for signal transduction HLK66_02570 PF00672 HAMP domain HLK66_02575 PF00209 Sodium:neurotransmitter symporter family HLK66_02590 PF00072 Response regulator receiver domain HLK66_02595 PF03812 2-keto-3-deoxygluconate permease HLK66_02610 PF01975 Survival protein SurE HLK66_02620 PF00528 Binding-protein-dependent transport system inner membrane component HLK66_02625 PF08402 TOBE domain HLK66_02625 PF00005 ABC transporter HLK66_02630 PF02811 PHP domain HLK66_02640 PF11132 Transcriptional regulator protein (SplA) HLK66_02645 PF02627 Carboxymuconolactone decarboxylase family HLK66_02650 PF16242 Pyridoxamine 5'-phosphate oxidase like HLK66_02655 PF03851 UV-endonuclease UvdE HLK66_02660 PF03851 UV-endonuclease UvdE HLK66_02670 PF07690 Major Facilitator Superfamily HLK66_02680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HLK66_02680 PF03466 LysR substrate binding domain HLK66_02685 PF01546 Peptidase family M20/M25/M40 HLK66_02690 PF03606 C4-dicarboxylate anaerobic carrier HLK66_02700 PF13460 NAD(P)H-binding HLK66_02705 PF07702 UTRA domain HLK66_02705 PF00392 Bacterial regulatory proteins, gntR family HLK66_02710 PF01380 SIS domain HLK66_02715 PF00294 pfkB family carbohydrate kinase HLK66_02720 PF03605 Anaerobic c4-dicarboxylate membrane transporter HLK66_02740 PF00294 pfkB family carbohydrate kinase HLK66_02745 PF00392 Bacterial regulatory proteins, gntR family HLK66_02745 PF07729 FCD domain HLK66_02750 PF03786 D-mannonate dehydratase (UxuA) HLK66_02760 PF02614 Glucuronate isomerase HLK66_02770 PF00367 phosphotransferase system, EIIB HLK66_02770 PF02378 Phosphotransferase system, EIIC HLK66_02770 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 HLK66_02775 PF00232 Glycosyl hydrolase family 1 HLK66_02780 PF00874 PRD domain HLK66_02780 PF03123 CAT RNA binding domain HLK66_02790 PF02342 TerD domain HLK66_02795 PF17863 AAA lid domain HLK66_02795 PF07726 ATPase family associated with various cellular activities (AAA) HLK66_02800 PF01882 Protein of unknown function DUF58 HLK66_02805 PF11992 Domain of unknown function (DUF3488) HLK66_02805 PF01841 Transglutaminase-like superfamily HLK66_02805 PF13559 Domain of unknown function (DUF4129) HLK66_02810 PF02540 NAD synthase HLK66_02810 PF00958 GMP synthase C terminal domain HLK66_02810 PF00117 Glutamine amidotransferase class-I HLK66_02815 PF01925 Sulfite exporter TauE/SafE HLK66_02820 PF03618 Kinase/pyrophosphorylase HLK66_02825 PF08279 HTH domain HLK66_02825 PF00571 CBS domain HLK66_02830 PF02896 PEP-utilising enzyme, TIM barrel domain HLK66_02830 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain HLK66_02830 PF00391 PEP-utilising enzyme, mobile domain HLK66_02835 PF00860 Permease family HLK66_02840 PF00874 PRD domain HLK66_02840 PF03123 CAT RNA binding domain HLK66_02845 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 HLK66_02845 PF02378 Phosphotransferase system, EIIC HLK66_02845 PF00367 phosphotransferase system, EIIB HLK66_02865 PF00144 Beta-lactamase HLK66_02865 PF11954 Domain of unknown function (DUF3471) HLK66_02910 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) HLK66_02915 PF14044 NETI protein HLK66_02920 PF00731 AIR carboxylase HLK66_02925 PF02222 ATP-grasp domain HLK66_02925 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain HLK66_02930 PF00206 Lyase HLK66_02930 PF10397 Adenylosuccinate lyase C-terminus HLK66_02935 PF01259 SAICAR synthetase HLK66_02940 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase HLK66_02950 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain HLK66_02950 PF02769 AIR synthase related protein, C-terminal domain HLK66_02950 PF00586 AIR synthase related protein, N-terminal domain HLK66_02955 PF00156 Phosphoribosyl transferase domain HLK66_02960 PF02769 AIR synthase related protein, C-terminal domain HLK66_02960 PF00586 AIR synthase related protein, N-terminal domain HLK66_02965 PF00551 Formyl transferase HLK66_02970 PF02142 MGS-like domain HLK66_02970 PF01808 AICARFT/IMPCHase bienzyme HLK66_02975 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain HLK66_02975 PF02843 Phosphoribosylglycinamide synthetase, C domain HLK66_02975 PF02844 Phosphoribosylglycinamide synthetase, N domain HLK66_02990 PF13382 Adenine deaminase C-terminal domain HLK66_02990 PF01979 Amidohydrolase family HLK66_02995 PF11258 Protein of unknown function (DUF3048) N-terminal domain HLK66_02995 PF17479 Protein of unknown function (DUF3048) C-terminal domain HLK66_03000 PF01371 Trp repressor protein HLK66_03005 PF01884 PcrB family HLK66_03010 PF13361 UvrD-like helicase C-terminal domain HLK66_03010 PF00580 UvrD/REP helicase N-terminal domain HLK66_03015 PF03119 NAD-dependent DNA ligase C4 zinc finger domain HLK66_03015 PF01653 NAD-dependent DNA ligase adenylation domain HLK66_03015 PF12826 Helix-hairpin-helix motif HLK66_03015 PF03120 NAD-dependent DNA ligase OB-fold domain HLK66_03015 PF00533 BRCA1 C Terminus (BRCT) domain HLK66_03020 PF07537 CamS sex pheromone cAM373 precursor HLK66_03025 PF07997 Protein of unknown function (DUF1694) HLK66_03030 PF02566 OsmC-like protein HLK66_03035 PF01047 MarR family HLK66_03045 PF02686 Glu-tRNAGln amidotransferase C subunit HLK66_03050 PF01425 Amidase HLK66_03055 PF02934 GatB/GatE catalytic domain HLK66_03055 PF02637 GatB domain HLK66_03065 PF02660 Glycerol-3-phosphate acyltransferase HLK66_03075 PF08281 Sigma-70, region 4 HLK66_03075 PF04542 Sigma-70 region 2 HLK66_03095 PF00781 Diacylglycerol kinase catalytic domain HLK66_03100 PF05958 tRNA (Uracil-5-)-methyltransferase HLK66_03100 PF01938 TRAM domain HLK66_03100 PF02475 Met-10+ like-protein HLK66_03110 PF00440 Bacterial regulatory proteins, tetR family HLK66_03110 PF13977 BetI-type transcriptional repressor, C-terminal HLK66_03120 PF01636 Phosphotransferase enzyme family HLK66_03135 PF04439 Streptomycin adenylyltransferase HLK66_03140 PF00302 Chloramphenicol acetyltransferase HLK66_03150 PF13649 Methyltransferase domain HLK66_03165 PF08241 Methyltransferase domain HLK66_03180 PF02463 RecF/RecN/SMC N terminal domain HLK66_03185 PF13361 UvrD-like helicase C-terminal domain HLK66_03185 PF00580 UvrD/REP helicase N-terminal domain HLK66_03195 PF00069 Protein kinase domain HLK66_03195 PF07238 PilZ domain HLK66_03205 PF07690 Major Facilitator Superfamily HLK66_03210 PF08240 Alcohol dehydrogenase GroES-like domain HLK66_03210 PF00107 Zinc-binding dehydrogenase HLK66_03220 PF01207 Dihydrouridine synthase (Dus) HLK66_03225 PF09855 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) HLK66_03230 PF10990 Protein of unknown function (DUF2809) HLK66_03235 PF00009 Elongation factor Tu GTP binding domain HLK66_03235 PF03764 Elongation factor G, domain IV HLK66_03235 PF00679 Elongation factor G C-terminus HLK66_03235 PF14492 Elongation Factor G, domain II HLK66_03240 PF00583 Acetyltransferase (GNAT) family HLK66_03245 PF01476 LysM domain HLK66_03245 PF06725 3D domain HLK66_03255 PF00528 Binding-protein-dependent transport system inner membrane component HLK66_03260 PF00528 Binding-protein-dependent transport system inner membrane component HLK66_03265 PF00672 HAMP domain HLK66_03265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HLK66_03265 PF02743 Cache domain HLK66_03265 PF06580 Histidine kinase HLK66_03270 PF00072 Response regulator receiver domain HLK66_03270 PF12833 Helix-turn-helix domain HLK66_03280 PF00563 EAL domain HLK66_03280 PF00990 Diguanylate cyclase, GGDEF domain HLK66_03280 PF03707 Bacterial signalling protein N terminal repeat HLK66_03290 PF12728 Helix-turn-helix domain HLK66_03295 PF01638 HxlR-like helix-turn-helix HLK66_03300 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HLK66_03305 PF01740 STAS domain HLK66_03310 PF08139 Prokaryotic membrane lipoprotein lipid attachment site HLK66_03310 PF11611 Domain of unknown function (DUF4352) HLK66_03315 PF00245 Alkaline phosphatase HLK66_03320 PF01177 Asp/Glu/Hydantoin racemase HLK66_03325 PF00155 Aminotransferase class I and II HLK66_03325 PF00392 Bacterial regulatory proteins, gntR family HLK66_03330 PF05362 Lon protease (S16) C-terminal proteolytic domain HLK66_03330 PF13180 PDZ domain HLK66_03340 PF00072 Response regulator receiver domain HLK66_03340 PF04397 LytTr DNA-binding domain HLK66_03360 PF03551 Transcriptional regulator PadR-like family HLK66_03375 PF01695 IstB-like ATP binding protein HLK66_03400 PF00005 ABC transporter HLK66_03400 PF00664 ABC transporter transmembrane region HLK66_03415 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain HLK66_03415 PF00749 tRNA synthetases class I (E and Q), catalytic domain HLK66_03425 PF03591 AzlC protein HLK66_03435 PF07690 Major Facilitator Superfamily HLK66_03440 PF13840 ACT domain HLK66_03440 PF00696 Amino acid kinase family HLK66_03450 PF00528 Binding-protein-dependent transport system inner membrane component HLK66_03455 PF00005 ABC transporter HLK66_03465 PF07687 Peptidase dimerisation domain HLK66_03465 PF01546 Peptidase family M20/M25/M40 HLK66_03470 PF01546 Peptidase family M20/M25/M40 HLK66_03470 PF07687 Peptidase dimerisation domain HLK66_03475 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HLK66_03475 PF00005 ABC transporter HLK66_03480 PF00005 ABC transporter HLK66_03480 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HLK66_03485 PF00528 Binding-protein-dependent transport system inner membrane component HLK66_03490 PF00528 Binding-protein-dependent transport system inner membrane component HLK66_03490 PF12911 N-terminal TM domain of oligopeptide transport permease C HLK66_03495 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HLK66_03500 PF00005 ABC transporter HLK66_03500 PF00664 ABC transporter transmembrane region HLK66_03505 PF00005 ABC transporter HLK66_03505 PF00664 ABC transporter transmembrane region HLK66_03510 PF04607 Region found in RelA / SpoT proteins HLK66_03515 PF00270 DEAD/DEAH box helicase HLK66_03515 PF00271 Helicase conserved C-terminal domain HLK66_03530 PF03845 Spore germination protein HLK66_03535 PF03323 Bacillus/Clostridium GerA spore germination protein HLK66_03540 PF05504 Spore germination B3/ GerAC like, C-terminal HLK66_03565 PF07730 Histidine kinase HLK66_03565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HLK66_03570 PF00196 Bacterial regulatory proteins, luxR family HLK66_03570 PF00072 Response regulator receiver domain HLK66_03575 PF01943 Polysaccharide biosynthesis protein HLK66_03590 PF01544 CorA-like Mg2+ transporter protein HLK66_03595 PF03061 Thioesterase superfamily HLK66_03605 PF01027 Inhibitor of apoptosis-promoting Bax1 HLK66_03610 PF01741 Large-conductance mechanosensitive channel, MscL HLK66_03615 PF00708 Acylphosphatase HLK66_03625 PF02073 Thermophilic metalloprotease (M29) HLK66_03630 PF13419 Haloacid dehalogenase-like hydrolase HLK66_03635 PF01131 DNA topoisomerase HLK66_03635 PF01751 Toprim domain HLK66_03645 PF09350 Domain of unknown function (DUF1992) HLK66_03650 PF01618 MotA/TolQ/ExbB proton channel family HLK66_03655 PF00691 OmpA family HLK66_03655 PF13677 Membrane MotB of proton-channel complex MotA/MotB HLK66_03660 PF01797 Transposase IS200 like HLK66_03665 PF00294 pfkB family carbohydrate kinase HLK66_03670 PF04227 Indigoidine synthase A like protein HLK66_03675 PF08671 Anti-repressor SinI HLK66_03675 PF01381 Helix-turn-helix HLK66_03690 PF08671 Anti-repressor SinI HLK66_03690 PF01381 Helix-turn-helix HLK66_03695 PF07702 UTRA domain HLK66_03695 PF00392 Bacterial regulatory proteins, gntR family HLK66_03705 PF00557 Metallopeptidase family M24 HLK66_03710 PF06569 Protein of unknown function (DUF1128) HLK66_03715 PF01451 Low molecular weight phosphotyrosine protein phosphatase HLK66_03725 PF03631 Virulence factor BrkB HLK66_03735 PF07690 Major Facilitator Superfamily HLK66_03740 PF01699 Sodium/calcium exchanger protein HLK66_03750 PF14167 YfkD-like protein HLK66_03755 PF08756 YfkB-like domain HLK66_03755 PF04055 Radical SAM superfamily HLK66_03770 PF00440 Bacterial regulatory proteins, tetR family HLK66_03780 PF05683 Fumarase C-terminus HLK66_03780 PF05681 Fumarate hydratase (Fumerase) HLK66_03785 PF01522 Polysaccharide deacetylase HLK66_03790 PF00730 HhH-GPD superfamily base excision DNA repair protein HLK66_03795 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) HLK66_03795 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 HLK66_03800 PF00970 Oxidoreductase FAD-binding domain HLK66_03800 PF00042 Globin HLK66_03800 PF00175 Oxidoreductase NAD-binding domain HLK66_03805 PF02082 Transcriptional regulator HLK66_03820 PF00440 Bacterial regulatory proteins, tetR family HLK66_03825 PF05958 tRNA (Uracil-5-)-methyltransferase HLK66_03825 PF01938 TRAM domain HLK66_03830 PF13408 Recombinase zinc beta ribbon domain HLK66_03830 PF07508 Recombinase HLK66_03890 PF00580 UvrD/REP helicase N-terminal domain HLK66_03890 PF13361 UvrD-like helicase C-terminal domain HLK66_03915 PF03845 Spore germination protein HLK66_03950 PF06013 Proteins of 100 residues with WXG HLK66_03955 PF08817 WXG100 protein secretion system (Wss), protein YukD HLK66_03960 PF10140 WXG100 protein secretion system (Wss), protein YukC HLK66_03965 PF01580 FtsK/SpoIIIE family HLK66_03965 PF12538 DNA transporter HLK66_03980 PF12848 ABC transporter HLK66_03980 PF00005 ABC transporter HLK66_03985 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain HLK66_03985 PF04616 Glycosyl hydrolases family 43 HLK66_03990 PF01810 LysE type translocator HLK66_03995 PF02872 5'-nucleotidase, C-terminal domain HLK66_03995 PF00149 Calcineurin-like phosphoesterase HLK66_04000 PF01373 Glycosyl hydrolase family 14 HLK66_04000 PF03423 Carbohydrate binding domain (family 25) HLK66_04000 PF00128 Alpha amylase, catalytic domain HLK66_04010 PF00072 Response regulator receiver domain HLK66_04010 PF00486 Transcriptional regulatory protein, C terminal HLK66_04015 PF00512 His Kinase A (phospho-acceptor) domain HLK66_04015 PF09456 RcsC Alpha-Beta-Loop (ABL) HLK66_04015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HLK66_04015 PF00072 Response regulator receiver domain HLK66_04020 PF00005 ABC transporter HLK66_04040 PF08447 PAS fold HLK66_04040 PF00989 PAS fold HLK66_04040 PF00512 His Kinase A (phospho-acceptor) domain HLK66_04040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HLK66_04045 PF00665 Integrase core domain HLK66_04045 PF13276 HTH-like domain HLK66_04045 PF13333 Integrase core domain HLK66_04060 PF07308 Protein of unknown function (DUF1456) HLK66_04070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HLK66_04070 PF03466 LysR substrate binding domain HLK66_04075 PF00107 Zinc-binding dehydrogenase HLK66_04075 PF08240 Alcohol dehydrogenase GroES-like domain HLK66_04095 PF00005 ABC transporter HLK66_04095 PF00571 CBS domain HLK66_04100 PF00528 Binding-protein-dependent transport system inner membrane component HLK66_04115 PF12849 PBP superfamily domain HLK66_04120 PF00528 Binding-protein-dependent transport system inner membrane component HLK66_04125 PF00528 Binding-protein-dependent transport system inner membrane component HLK66_04130 PF00005 ABC transporter HLK66_04135 PF01895 PhoU domain HLK66_04145 PF06580 Histidine kinase HLK66_04150 PF00072 Response regulator receiver domain HLK66_04150 PF12833 Helix-turn-helix domain HLK66_04155 PF13407 Periplasmic binding protein domain HLK66_04160 PF00005 ABC transporter HLK66_04165 PF02653 Branched-chain amino acid transport system / permease component HLK66_04170 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III HLK66_04170 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal HLK66_04175 PF07690 Major Facilitator Superfamily HLK66_04195 PF02801 Beta-ketoacyl synthase, C-terminal domain HLK66_04195 PF00109 Beta-ketoacyl synthase, N-terminal domain HLK66_04205 PF05368 NmrA-like family HLK66_04210 PF01638 HxlR-like helix-turn-helix HLK66_04215 PF00005 ABC transporter HLK66_04220 PF00528 Binding-protein-dependent transport system inner membrane component HLK66_04235 PF17676 LD-carboxypeptidase C-terminal domain HLK66_04235 PF02016 LD-carboxypeptidase N-terminal domain HLK66_04240 PF08459 UvrC Helix-hairpin-helix N-terminal HLK66_04240 PF02151 UvrB/uvrC motif HLK66_04240 PF01541 GIY-YIG catalytic domain HLK66_04240 PF12826 Helix-hairpin-helix motif HLK66_04255 PF03707 Bacterial signalling protein N terminal repeat HLK66_04255 PF00990 Diguanylate cyclase, GGDEF domain HLK66_04255 PF00563 EAL domain HLK66_04260 PF02696 Uncharacterized ACR, YdiU/UPF0061 family HLK66_04265 PF08271 TFIIB zinc-binding HLK66_04270 PF04536 TPM domain HLK66_04275 PF13421 SPFH domain-Band 7 family HLK66_04280 PF01047 MarR family HLK66_04285 PF01554 MatE HLK66_04300 PF08532 Beta-galactosidase trimerisation domain HLK66_04300 PF08533 Beta-galactosidase C-terminal domain HLK66_04300 PF02449 Beta-galactosidase HLK66_04310 PF06964 Alpha-L-arabinofuranosidase C-terminal domain HLK66_04315 PF07972 NrdI Flavodoxin like HLK66_04320 PF00317 Ribonucleotide reductase, all-alpha domain HLK66_04320 PF08343 Ribonucleotide reductase N-terminal HLK66_04320 PF02867 Ribonucleotide reductase, barrel domain HLK66_04325 PF00268 Ribonucleotide reductase, small chain HLK66_04330 PF08281 Sigma-70, region 4 HLK66_04330 PF04542 Sigma-70 region 2 HLK66_04335 PF13800 Sigma factor regulator N-terminal HLK66_04335 PF13791 Sigma factor regulator C-terminal HLK66_04345 PF00664 ABC transporter transmembrane region HLK66_04345 PF00005 ABC transporter HLK66_04350 PF00664 ABC transporter transmembrane region HLK66_04350 PF00005 ABC transporter HLK66_04355 PF01212 Beta-eliminating lyase HLK66_04375 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HLK66_04375 PF12729 Four helix bundle sensory module for signal transduction HLK66_04375 PF00672 HAMP domain HLK66_04385 PF07690 Major Facilitator Superfamily HLK66_04400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HLK66_04400 PF07694 5TMR of 5TMR-LYT HLK66_04400 PF06580 Histidine kinase HLK66_04405 PF04397 LytTr DNA-binding domain HLK66_04405 PF00072 Response regulator receiver domain HLK66_04410 PF07690 Major Facilitator Superfamily HLK66_04415 PF10112 5-bromo-4-chloroindolyl phosphate hydrolysis protein HLK66_04420 PF05816 Toxic anion resistance protein (TelA) HLK66_04425 PF02567 Phenazine biosynthesis-like protein HLK66_04430 PF06177 QueT transporter HLK66_04440 PF00005 ABC transporter HLK66_04445 PF12704 MacB-like periplasmic core domain HLK66_04445 PF02687 FtsX-like permease family HLK66_04445 PF00005 ABC transporter HLK66_04455 PF00512 His Kinase A (phospho-acceptor) domain HLK66_04455 PF00672 HAMP domain HLK66_04455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HLK66_04460 PF03061 Thioesterase superfamily HLK66_04470 PF13458 Periplasmic binding protein HLK66_04475 PF02653 Branched-chain amino acid transport system / permease component HLK66_04480 PF02653 Branched-chain amino acid transport system / permease component HLK66_04480 PF11862 Domain of unknown function (DUF3382) HLK66_04485 PF00005 ABC transporter HLK66_04485 PF12399 Branched-chain amino acid ATP-binding cassette transporter HLK66_04490 PF00005 ABC transporter HLK66_04495 PF10282 Lactonase, 7-bladed beta-propeller HLK66_04500 PF04616 Glycosyl hydrolases family 43 HLK66_04500 PF16369 C-terminal lipocalin-like domain HLK66_04510 PF02631 RecX family HLK66_04515 PF08838 Protein of unknown function (DUF1811) HLK66_04520 PF08176 Small acid-soluble spore protein K family HLK66_04525 PF14043 WVELL protein HLK66_04530 PF04307 LexA-binding, inner membrane-associated putative hydrolase HLK66_04535 PF14815 NUDIX domain HLK66_04535 PF00730 HhH-GPD superfamily base excision DNA repair protein HLK66_04560 PF04167 Protein of unknown function (DUF402) HLK66_04565 PF00005 ABC transporter HLK66_04565 PF00664 ABC transporter transmembrane region HLK66_04570 PF06081 Aromatic acid exporter family member 1 HLK66_04575 PF00202 Aminotransferase class-III HLK66_04580 PF07885 Ion channel HLK66_04585 PF00578 AhpC/TSA family HLK66_04590 PF01475 Ferric uptake regulator family HLK66_04595 PF14540 Nucleotidyltransferase-like HLK66_04595 PF18576 Helix-turn-helix domain HLK66_04690 PF02899 Phage integrase, N-terminal SAM-like domain HLK66_04690 PF00589 Phage integrase family HLK66_04795 PF09335 SNARE associated Golgi protein HLK66_04800 PF00072 Response regulator receiver domain HLK66_04800 PF00486 Transcriptional regulatory protein, C terminal HLK66_04805 PF00512 His Kinase A (phospho-acceptor) domain HLK66_04810 PF01446 Replication protein HLK66_04820 PF00664 ABC transporter transmembrane region HLK66_04820 PF00005 ABC transporter HLK66_04825 PF08378 Nuclease-related domain HLK66_04830 PF00155 Aminotransferase class I and II HLK66_04830 PF00392 Bacterial regulatory proteins, gntR family HLK66_04840 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit HLK66_04845 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HLK66_04855 PF02378 Phosphotransferase system, EIIC HLK66_04860 PF00232 Glycosyl hydrolase family 1 HLK66_04865 PF08279 HTH domain HLK66_04865 PF05043 Mga helix-turn-helix domain HLK66_04865 PF00874 PRD domain HLK66_04865 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HLK66_04885 PF00005 ABC transporter HLK66_04885 PF13732 Domain of unknown function (DUF4162) HLK66_04890 PF01061 ABC-2 type transporter HLK66_04905 PF10509 Galactokinase galactose-binding signature HLK66_04905 PF08544 GHMP kinases C terminal HLK66_04905 PF00288 GHMP kinases N terminal domain HLK66_04915 PF08544 GHMP kinases C terminal HLK66_04915 PF00288 GHMP kinases N terminal domain HLK66_04920 PF01070 FMN-dependent dehydrogenase HLK66_04930 PF01047 MarR family HLK66_04940 PF02909 Tetracyclin repressor-like, C-terminal domain HLK66_04940 PF00440 Bacterial regulatory proteins, tetR family HLK66_04945 PF07690 Major Facilitator Superfamily HLK66_04950 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment HLK66_04955 PF01297 Zinc-uptake complex component A periplasmic HLK66_04955 PF01297 Zinc-uptake complex component A periplasmic HLK66_04975 PF04229 GrpB protein HLK66_04975 PF13673 Acetyltransferase (GNAT) domain HLK66_04980 PF13411 MerR HTH family regulatory protein HLK66_04985 PF00892 EamA-like transporter family HLK66_04995 PF01497 Periplasmic binding protein HLK66_05000 PF01032 FecCD transport family HLK66_05005 PF01032 FecCD transport family HLK66_05010 PF00005 ABC transporter HLK66_05015 PF07470 Glycosyl Hydrolase Family 88 HLK66_05025 PF00486 Transcriptional regulatory protein, C terminal HLK66_05025 PF00072 Response regulator receiver domain HLK66_05030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HLK66_05035 PF00005 ABC transporter HLK66_05045 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HLK66_05050 PF03123 CAT RNA binding domain HLK66_05050 PF00874 PRD domain HLK66_05055 PF02378 Phosphotransferase system, EIIC HLK66_05055 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 HLK66_05055 PF00367 phosphotransferase system, EIIB HLK66_05060 PF00232 Glycosyl hydrolase family 1 HLK66_05065 PF02682 Carboxyltransferase domain, subdomain C and D HLK66_05070 PF02626 Carboxyltransferase domain, subdomain A and B HLK66_05075 PF07690 Major Facilitator Superfamily HLK66_05080 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HLK66_05090 PF01116 Fructose-bisphosphate aldolase class-II HLK66_05095 PF00455 DeoR C terminal sensor domain HLK66_05095 PF08220 DeoR-like helix-turn-helix domain HLK66_05100 PF00106 short chain dehydrogenase HLK66_05110 PF00664 ABC transporter transmembrane region HLK66_05110 PF00005 ABC transporter HLK66_05115 PF13186 Iron-sulfur cluster-binding domain HLK66_05115 PF04055 Radical SAM superfamily HLK66_05125 PF00232 Glycosyl hydrolase family 1 HLK66_05135 PF00037 4Fe-4S binding domain HLK66_05155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HLK66_05155 PF00512 His Kinase A (phospho-acceptor) domain HLK66_05160 PF00512 His Kinase A (phospho-acceptor) domain HLK66_05160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HLK66_05180 PF01047 MarR family HLK66_05185 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HLK66_05190 PF01613 Flavin reductase like domain HLK66_05195 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HLK66_05200 PF01738 Dienelactone hydrolase family HLK66_05215 PF04143 Sulphur transport HLK66_05220 PF04264 YceI-like domain HLK66_05225 PF08741 YwhD family HLK66_05230 PF00296 Luciferase-like monooxygenase HLK66_05235 PF03358 NADPH-dependent FMN reductase HLK66_05250 PF02743 Cache domain HLK66_05250 PF06580 Histidine kinase HLK66_05250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HLK66_05250 PF00672 HAMP domain HLK66_05255 PF12833 Helix-turn-helix domain HLK66_05255 PF00072 Response regulator receiver domain HLK66_05260 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) HLK66_05265 PF00083 Sugar (and other) transporter HLK66_05270 PF00872 Transposase, Mutator family HLK66_05285 PF00291 Pyridoxal-phosphate dependent enzyme HLK66_05300 PF00106 short chain dehydrogenase HLK66_05305 PF13411 MerR HTH family regulatory protein HLK66_05325 PF02627 Carboxymuconolactone decarboxylase family HLK66_05335 PF09335 SNARE associated Golgi protein HLK66_05350 PF03109 ABC1 family HLK66_05365 PF13823 Alcohol dehydrogenase GroES-associated HLK66_05365 PF08240 Alcohol dehydrogenase GroES-like domain HLK66_05365 PF00107 Zinc-binding dehydrogenase HLK66_05380 PF01226 Formate/nitrite transporter HLK66_05385 PF07690 Major Facilitator Superfamily HLK66_05400 PF08331 Domain of unknown function (DUF1730) HLK66_05405 PF12671 Putative amidase domain HLK66_05410 PF00588 SpoU rRNA Methylase family HLK66_05415 PF00881 Nitroreductase family HLK66_05420 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal HLK66_05420 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III HLK66_05425 PF06798 PrkA serine protein kinase C-terminal domain HLK66_05425 PF08298 PrkA AAA domain HLK66_05430 PF04285 Protein of unknown function (DUF444) HLK66_05460 PF04304 Protein of unknown function (DUF454) HLK66_05475 PF00248 Aldo/keto reductase family HLK66_05480 PF00480 ROK family HLK66_05485 PF01418 Helix-turn-helix domain, rpiR family HLK66_05485 PF01380 SIS domain HLK66_05490 PF00232 Glycosyl hydrolase family 1 HLK66_05495 PF02378 Phosphotransferase system, EIIC HLK66_05495 PF00367 phosphotransferase system, EIIB HLK66_05495 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 HLK66_05500 PF04055 Radical SAM superfamily HLK66_05500 PF13186 Iron-sulfur cluster-binding domain HLK66_05505 PF00884 Sulfatase HLK66_05505 PF16347 Domain of unknown function (DUF4976) HLK66_05510 PF02417 Chromate transporter HLK66_05520 PF03781 Sulfatase-modifying factor enzyme 1 HLK66_05530 PF12833 Helix-turn-helix domain HLK66_05530 PF02311 AraC-like ligand binding domain HLK66_05535 PF00367 phosphotransferase system, EIIB HLK66_05535 PF02378 Phosphotransferase system, EIIC HLK66_05540 PF01915 Glycosyl hydrolase family 3 C-terminal domain HLK66_05540 PF00933 Glycosyl hydrolase family 3 N terminal domain HLK66_05540 PF14310 Fibronectin type III-like domain HLK66_05545 PF00293 NUDIX domain HLK66_05545 PF13344 Haloacid dehalogenase-like hydrolase HLK66_05590 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HLK66_05595 PF01638 HxlR-like helix-turn-helix HLK66_05620 PF03992 Antibiotic biosynthesis monooxygenase HLK66_05625 PF02311 AraC-like ligand binding domain HLK66_05625 PF12833 Helix-turn-helix domain HLK66_05630 PF00892 EamA-like transporter family HLK66_05635 PF04237 YjbR HLK66_05640 PF17853 GGDEF-like domain HLK66_05640 PF12833 Helix-turn-helix domain HLK66_05650 PF00703 Glycosyl hydrolases family 2 HLK66_05650 PF02837 Glycosyl hydrolases family 2, sugar binding domain HLK66_05650 PF02836 Glycosyl hydrolases family 2, TIM barrel domain HLK66_05655 PF00480 ROK family HLK66_05660 PF03786 D-mannonate dehydratase (UxuA) HLK66_05665 PF00106 short chain dehydrogenase HLK66_05670 PF04072 Leucine carboxyl methyltransferase HLK66_05680 PF00196 Bacterial regulatory proteins, luxR family HLK66_05680 PF00072 Response regulator receiver domain HLK66_05685 PF07730 Histidine kinase HLK66_05690 PF00487 Fatty acid desaturase HLK66_05695 PF03129 Anticodon binding domain HLK66_05695 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HLK66_05695 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HLK66_05695 PF02824 TGS domain HLK66_05705 PF01381 Helix-turn-helix HLK66_05720 PF03807 NADP oxidoreductase coenzyme F420-dependent HLK66_05720 PF14748 Pyrroline-5-carboxylate reductase dimerisation HLK66_05725 PF00072 Response regulator receiver domain HLK66_05725 PF00990 Diguanylate cyclase, GGDEF domain HLK66_05745 PF00486 Transcriptional regulatory protein, C terminal HLK66_05745 PF00072 Response regulator receiver domain HLK66_05750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HLK66_05750 PF13426 PAS domain HLK66_05750 PF00672 HAMP domain HLK66_05750 PF00512 His Kinase A (phospho-acceptor) domain HLK66_05755 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 HLK66_05755 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) HLK66_05760 PF01384 Phosphate transporter family HLK66_05765 PF01865 Protein of unknown function DUF47 HLK66_05775 PF00106 short chain dehydrogenase HLK66_05780 PF00248 Aldo/keto reductase family HLK66_05785 PF04226 Transglycosylase associated protein HLK66_05790 PF01479 S4 domain HLK66_05790 PF00849 RNA pseudouridylate synthase HLK66_05800 PF00085 Thioredoxin HLK66_05805 PF02600 Disulfide bond formation protein DsbB HLK66_05810 PF00583 Acetyltransferase (GNAT) family HLK66_05810 PF00795 Carbon-nitrogen hydrolase HLK66_05820 PF14148 YhdB-like protein HLK66_05825 PF01476 LysM domain HLK66_05825 PF00246 Zinc carboxypeptidase HLK66_05835 PF00860 Permease family HLK66_05850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HLK66_05850 PF03466 LysR substrate binding domain HLK66_05855 PF00440 Bacterial regulatory proteins, tetR family HLK66_05860 PF00893 Small Multidrug Resistance protein HLK66_05865 PF17314 Family of unknown function (DUF5360) HLK66_05885 PF08279 HTH domain HLK66_05885 PF13280 WYL domain HLK66_05905 PF01695 IstB-like ATP binding protein HLK66_05925 PF13411 MerR HTH family regulatory protein HLK66_05945 PF03819 MazG nucleotide pyrophosphohydrolase domain HLK66_05955 PF06445 GyrI-like small molecule binding domain HLK66_05955 PF13411 MerR HTH family regulatory protein HLK66_05960 PF04474 Protein of unknown function (DUF554) HLK66_05965 PF12679 ABC-2 family transporter protein HLK66_05970 PF00005 ABC transporter HLK66_05980 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) HLK66_05980 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 HLK66_05985 PF01544 CorA-like Mg2+ transporter protein HLK66_05990 PF00072 Response regulator receiver domain HLK66_05990 PF00486 Transcriptional regulatory protein, C terminal HLK66_05995 PF03471 Transporter associated domain HLK66_05995 PF01595 Cyclin M transmembrane N-terminal domain HLK66_05995 PF00571 CBS domain HLK66_06000 PF03471 Transporter associated domain HLK66_06000 PF00571 CBS domain HLK66_06000 PF01595 Cyclin M transmembrane N-terminal domain HLK66_06005 PF13302 Acetyltransferase (GNAT) domain HLK66_06010 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HLK66_06010 PF05227 CHASE3 domain HLK66_06010 PF00672 HAMP domain HLK66_06025 PF07690 Major Facilitator Superfamily HLK66_06035 PF00005 ABC transporter HLK66_06035 PF00664 ABC transporter transmembrane region HLK66_06040 PF00005 ABC transporter HLK66_06040 PF00664 ABC transporter transmembrane region HLK66_06045 PF00756 Putative esterase HLK66_06050 PF12833 Helix-turn-helix domain HLK66_06050 PF01497 Periplasmic binding protein HLK66_06055 PF01497 Periplasmic binding protein HLK66_06060 PF01032 FecCD transport family HLK66_06070 PF00665 Integrase core domain HLK66_06070 PF13333 Integrase core domain HLK66_06070 PF13276 HTH-like domain HLK66_06075 PF01032 FecCD transport family HLK66_06080 PF00756 Putative esterase HLK66_06085 PF00269 Small, acid-soluble spore proteins, alpha/beta type HLK66_06095 PF17912 MalK OB fold domain HLK66_06095 PF03459 TOBE domain HLK66_06095 PF00005 ABC transporter HLK66_06100 PF13556 PucR C-terminal helix-turn-helix domain HLK66_06125 PF14398 YheC/D like ATP-grasp HLK66_06130 PF14398 YheC/D like ATP-grasp HLK66_06135 PF14398 YheC/D like ATP-grasp HLK66_06145 PF06133 Control of competence regulator ComK, YlbF/YmcA HLK66_06150 PF00269 Small, acid-soluble spore proteins, alpha/beta type HLK66_06160 PF04055 Radical SAM superfamily HLK66_06165 PF00860 Permease family HLK66_06170 PF13732 Domain of unknown function (DUF4162) HLK66_06170 PF00005 ABC transporter HLK66_06180 PF00149 Calcineurin-like phosphoesterase HLK66_06185 PF13514 AAA domain HLK66_06190 PF01336 OB-fold nucleic acid binding domain HLK66_06190 PF01966 HD domain HLK66_06195 PF14147 Sporulation protein YhaL HLK66_06200 PF09680 Family of unknown function HLK66_06215 PF11667 Putative zincin peptidase HLK66_06220 PF01047 MarR family HLK66_06230 PF00266 Aminotransferase class-V HLK66_06235 PF01230 HIT domain HLK66_06240 PF00005 ABC transporter HLK66_06245 PF05975 Bacterial ABC transporter protein EcsB HLK66_06250 PF12787 EcsC protein family HLK66_06255 PF07687 Peptidase dimerisation domain HLK66_06255 PF01546 Peptidase family M20/M25/M40 HLK66_06275 PF00672 HAMP domain HLK66_06275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HLK66_06275 PF07730 Histidine kinase HLK66_06280 PF00196 Bacterial regulatory proteins, luxR family HLK66_06280 PF00072 Response regulator receiver domain HLK66_06290 PF01208 Uroporphyrinogen decarboxylase (URO-D) HLK66_06300 PF17932 Tetracyclin repressor-like, C-terminal domain HLK66_06300 PF00440 Bacterial regulatory proteins, tetR family HLK66_06310 PF03099 Biotin/lipoate A/B protein ligase family HLK66_06310 PF10437 Bacterial lipoate protein ligase C-terminus HLK66_06315 PF16491 CAAX prenyl protease N-terminal, five membrane helices HLK66_06315 PF01435 Peptidase family M48 HLK66_06335 PF01695 IstB-like ATP binding protein HLK66_06345 PF07676 WD40-like Beta Propeller Repeat HLK66_06345 PF00326 Prolyl oligopeptidase family HLK66_06350 PF03816 Cell envelope-related transcriptional attenuator domain HLK66_06355 PF09335 SNARE associated Golgi protein HLK66_06360 PF10502 Signal peptidase, peptidase S26 HLK66_06365 PF13361 UvrD-like helicase C-terminal domain HLK66_06365 PF12705 PD-(D/E)XK nuclease superfamily HLK66_06370 PF13361 UvrD-like helicase C-terminal domain HLK66_06370 PF12705 PD-(D/E)XK nuclease superfamily HLK66_06370 PF00580 UvrD/REP helicase N-terminal domain HLK66_06375 PF10676 Spore germination protein gerPA/gerPF HLK66_06380 PF10676 Spore germination protein gerPA/gerPF HLK66_06395 PF10737 Spore germination protein GerPC HLK66_06400 PF10803 Spore germination GerPB HLK66_06410 PF01557 Fumarylacetoacetate (FAA) hydrolase family HLK66_06415 PF07457 Protein of unknown function (DUF1516) HLK66_06420 PF07730 Histidine kinase HLK66_06425 PF00072 Response regulator receiver domain HLK66_06425 PF00196 Bacterial regulatory proteins, luxR family HLK66_06430 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) HLK66_06430 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 HLK66_06435 PF00571 CBS domain HLK66_06435 PF03471 Transporter associated domain HLK66_06435 PF01595 Cyclin M transmembrane N-terminal domain HLK66_06440 PF00005 ABC transporter HLK66_06455 PF01209 ubiE/COQ5 methyltransferase family HLK66_06460 PF00005 ABC transporter HLK66_06470 PF01380 SIS domain HLK66_06470 PF01418 Helix-turn-helix domain, rpiR family HLK66_06475 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HLK66_06475 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HLK66_06480 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HLK66_06480 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HLK66_06490 PF07883 Cupin domain HLK66_06490 PF12833 Helix-turn-helix domain HLK66_06495 PF07944 Beta-L-arabinofuranosidase, GH127 HLK66_06505 PF00583 Acetyltransferase (GNAT) family HLK66_06515 PF13537 Glutamine amidotransferase domain HLK66_06515 PF00733 Asparagine synthase HLK66_06520 PF03845 Spore germination protein HLK66_06525 PF00892 EamA-like transporter family HLK66_06540 PF04461 Protein of unknown function (DUF520) HLK66_06550 PF17783 CvfB-like winged helix domain HLK66_06550 PF13509 S1 domain HLK66_06560 PF02645 Uncharacterised protein, DegV family COG1307 HLK66_06565 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) HLK66_06565 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 HLK66_06575 PF12758 Protein of unknown function (DUF3813) HLK66_06590 PF00326 Prolyl oligopeptidase family HLK66_06595 PF01883 Iron-sulfur cluster assembly protein HLK66_06600 PF06463 Molybdenum Cofactor Synthesis C HLK66_06600 PF04055 Radical SAM superfamily HLK66_06605 PF00994 Probable molybdopterin binding domain HLK66_06605 PF03454 MoeA C-terminal region (domain IV) HLK66_06605 PF03453 MoeA N-terminal region (domain I and II) HLK66_06610 PF02652 L-lactate permease HLK66_06615 PF00392 Bacterial regulatory proteins, gntR family HLK66_06615 PF07729 FCD domain HLK66_06620 PF02754 Cysteine-rich domain HLK66_06625 PF02589 LUD domain HLK66_06625 PF13183 4Fe-4S dicluster domain HLK66_06625 PF11870 Domain of unknown function (DUF3390) HLK66_06630 PF02589 LUD domain HLK66_06635 PF02774 Semialdehyde dehydrogenase, dimerisation domain HLK66_06635 PF01118 Semialdehyde dehydrogenase, NAD binding domain HLK66_06640 PF01960 ArgJ family HLK66_06645 PF00696 Amino acid kinase family HLK66_06650 PF00202 Aminotransferase class-III HLK66_06655 PF00117 Glutamine amidotransferase class-I HLK66_06655 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain HLK66_06660 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain HLK66_06660 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HLK66_06665 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HLK66_06665 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HLK66_06670 PF14168 YjzC-like protein HLK66_06675 PF10431 C-terminal, D2-small domain, of ClpB protein HLK66_06675 PF17871 AAA lid domain HLK66_06675 PF02861 Clp amino terminal domain, pathogenicity island component HLK66_06675 PF07724 AAA domain (Cdc48 subfamily) HLK66_06675 PF00004 ATPase family associated with various cellular activities (AAA) HLK66_06695 PF02608 ABC transporter substrate-binding protein PnrA-like HLK66_06700 PF00106 short chain dehydrogenase HLK66_06705 PF00874 PRD domain HLK66_06705 PF05043 Mga helix-turn-helix domain HLK66_06705 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HLK66_06705 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HLK66_06705 PF08279 HTH domain HLK66_06715 PF03608 PTS system enzyme II sorbitol-specific factor HLK66_06720 PF03612 Sorbitol phosphotransferase enzyme II N-terminus HLK66_06720 PF07663 Sorbitol phosphotransferase enzyme II C-terminus HLK66_06745 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal HLK66_06745 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III HLK66_06750 PF02801 Beta-ketoacyl synthase, C-terminal domain HLK66_06750 PF00109 Beta-ketoacyl synthase, N-terminal domain HLK66_06755 PF01475 Ferric uptake regulator family HLK66_06760 PF10026 Predicted Zn-dependent protease (DUF2268) HLK66_06765 PF12227 Protein of unknown function (DUF3603) HLK66_06770 PF00579 tRNA synthetases class I (W and Y) HLK66_06775 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HLK66_06780 PF00528 Binding-protein-dependent transport system inner membrane component HLK66_06785 PF00528 Binding-protein-dependent transport system inner membrane component HLK66_06785 PF12911 N-terminal TM domain of oligopeptide transport permease C HLK66_06790 PF00005 ABC transporter HLK66_06790 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HLK66_06795 PF00005 ABC transporter HLK66_06795 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HLK66_06805 PF13508 Acetyltransferase (GNAT) domain HLK66_06810 PF03960 ArsC family HLK66_06815 PF05389 Negative regulator of genetic competence (MecA) HLK66_06820 PF13396 Phospholipase_D-nuclease N-terminal HLK66_06820 PF13091 PLD-like domain HLK66_06830 PF08439 Oligopeptidase F HLK66_06830 PF01432 Peptidase family M3 HLK66_06840 PF01152 Bacterial-like globin HLK66_06845 PF01464 Transglycosylase SLT domain HLK66_06850 PF01928 CYTH domain HLK66_06860 PF04607 Region found in RelA / SpoT proteins HLK66_06865 PF01513 ATP-NAD kinase HLK66_06870 PF00849 RNA pseudouridylate synthase HLK66_06875 PF00149 Calcineurin-like phosphoesterase HLK66_06880 PF03448 MgtE intracellular N domain HLK66_06880 PF00571 CBS domain HLK66_06880 PF01769 Divalent cation transporter HLK66_06885 PF00999 Sodium/hydrogen exchanger family HLK66_06885 PF02080 TrkA-C domain HLK66_06885 PF02254 TrkA-N domain HLK66_06905 PF07098 Protein of unknown function (DUF1360) HLK66_06915 PF03862 SpoVAC/SpoVAEB sporulation membrane protein HLK66_06920 PF07451 Stage V sporulation protein AD (SpoVAD) HLK66_06925 PF03862 SpoVAC/SpoVAEB sporulation membrane protein HLK66_06935 PF14069 Stage VI sporulation protein F HLK66_06940 PF00580 UvrD/REP helicase N-terminal domain HLK66_06940 PF13361 UvrD-like helicase C-terminal domain HLK66_06950 PF04239 Protein of unknown function (DUF421) HLK66_06955 PF13673 Acetyltransferase (GNAT) domain HLK66_06965 PF00756 Putative esterase HLK66_06970 PF03477 ATP cone domain HLK66_06970 PF13597 Anaerobic ribonucleoside-triphosphate reductase HLK66_06985 PF03358 NADPH-dependent FMN reductase HLK66_07005 PF11738 Protein of unknown function (DUF3298) HLK66_07005 PF13739 Deacetylase PdaC HLK66_07005 PF01522 Polysaccharide deacetylase HLK66_07010 PF02447 GntP family permease HLK66_07025 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain HLK66_07025 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HLK66_07035 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HLK66_07035 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HLK66_07045 PF02805 Metal binding domain of Ada HLK66_07045 PF12833 Helix-turn-helix domain HLK66_07050 PF10509 Galactokinase galactose-binding signature HLK66_07050 PF08544 GHMP kinases C terminal HLK66_07050 PF00288 GHMP kinases N terminal domain HLK66_07055 PF16363 GDP-mannose 4,6 dehydratase HLK66_07060 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain HLK66_07060 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain HLK66_07065 PF00535 Glycosyl transferase family 2 HLK66_07070 PF00356 Bacterial regulatory proteins, lacI family HLK66_07070 PF13407 Periplasmic binding protein domain HLK66_07075 PF01979 Amidohydrolase family HLK66_07080 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase HLK66_07085 PF00392 Bacterial regulatory proteins, gntR family HLK66_07085 PF07702 UTRA domain HLK66_07090 PF03746 LamB/YcsF family HLK66_07095 PF04542 Sigma-70 region 2 HLK66_07095 PF08281 Sigma-70, region 4 HLK66_07100 PF00854 POT family HLK66_07120 PF00834 Ribulose-phosphate 3 epimerase family HLK66_07130 PF07687 Peptidase dimerisation domain HLK66_07130 PF01546 Peptidase family M20/M25/M40 HLK66_07145 PF00596 Class II Aldolase and Adducin N-terminal domain HLK66_07155 PF10114 Sensory domain found in PocR HLK66_07155 PF12833 Helix-turn-helix domain HLK66_07160 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HLK66_07160 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HLK66_07165 PF06134 L-rhamnose isomerase (RhaA) HLK66_07185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HLK66_07185 PF06580 Histidine kinase HLK66_07185 PF00672 HAMP domain HLK66_07185 PF02743 Cache domain HLK66_07190 PF12833 Helix-turn-helix domain HLK66_07190 PF00072 Response regulator receiver domain HLK66_07195 PF13407 Periplasmic binding protein domain HLK66_07200 PF00005 ABC transporter HLK66_07205 PF02653 Branched-chain amino acid transport system / permease component HLK66_07210 PF08220 DeoR-like helix-turn-helix domain HLK66_07210 PF00455 DeoR C terminal sensor domain HLK66_07215 PF00596 Class II Aldolase and Adducin N-terminal domain HLK66_07220 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain HLK66_07220 PF01740 STAS domain HLK66_07225 PF00128 Alpha amylase, catalytic domain HLK66_07225 PF16657 Maltogenic Amylase, C-terminal domain HLK66_07230 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 HLK66_07230 PF02378 Phosphotransferase system, EIIC HLK66_07230 PF00367 phosphotransferase system, EIIB HLK66_07235 PF00483 Nucleotidyl transferase HLK66_07240 PF03407 Nucleotide-diphospho-sugar transferase HLK66_07245 PF16363 GDP-mannose 4,6 dehydratase HLK66_07250 PF16363 GDP-mannose 4,6 dehydratase HLK66_07270 PF00535 Glycosyl transferase family 2 HLK66_07275 PF00872 Transposase, Mutator family HLK66_07280 PF01545 Cation efflux family HLK66_07280 PF16916 Dimerisation domain of Zinc Transporter HLK66_07285 PF10127 RNA repair pathway DNA polymerase beta family HLK66_07300 PF00873 AcrB/AcrD/AcrF family HLK66_07305 PF00440 Bacterial regulatory proteins, tetR family HLK66_07310 PF12849 PBP superfamily domain HLK66_07315 PF03714 Bacterial pullanase-associated domain HLK66_07315 PF00128 Alpha amylase, catalytic domain HLK66_07315 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) HLK66_07325 PF01212 Beta-eliminating lyase HLK66_07330 PF07992 Pyridine nucleotide-disulphide oxidoreductase HLK66_07330 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HLK66_07335 PF02583 Metal-sensitive transcriptional repressor HLK66_07340 PF13686 DsrE/DsrF/DrsH-like family HLK66_07345 PF00581 Rhodanese-like domain HLK66_07360 PF07875 Coat F domain HLK66_07370 PF00474 Sodium:solute symporter family HLK66_07375 PF04341 Protein of unknown function, DUF485 HLK66_07380 PF05067 Manganese containing catalase HLK66_07385 PF01717 Cobalamin-independent synthase, Catalytic domain HLK66_07395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HLK66_07395 PF00512 His Kinase A (phospho-acceptor) domain HLK66_07395 PF00672 HAMP domain HLK66_07400 PF00072 Response regulator receiver domain HLK66_07400 PF00486 Transcriptional regulatory protein, C terminal HLK66_07420 PF00512 His Kinase A (phospho-acceptor) domain HLK66_07420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HLK66_07425 PF00072 Response regulator receiver domain HLK66_07425 PF00486 Transcriptional regulatory protein, C terminal HLK66_07440 PF00005 ABC transporter HLK66_07455 PF00665 Integrase core domain HLK66_07455 PF13333 Integrase core domain HLK66_07455 PF13276 HTH-like domain HLK66_07475 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HLK66_07475 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain HLK66_07480 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HLK66_07485 PF03358 NADPH-dependent FMN reductase HLK66_07490 PF12833 Helix-turn-helix domain HLK66_07490 PF00072 Response regulator receiver domain HLK66_07495 PF06580 Histidine kinase HLK66_07495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HLK66_07495 PF00672 HAMP domain HLK66_07495 PF02743 Cache domain HLK66_07505 PF00528 Binding-protein-dependent transport system inner membrane component HLK66_07510 PF00528 Binding-protein-dependent transport system inner membrane component HLK66_07530 PF10942 Protein of unknown function (DUF2619) HLK66_07540 PF07690 Major Facilitator Superfamily HLK66_07545 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 HLK66_07550 PF00005 ABC transporter HLK66_07555 PF00528 Binding-protein-dependent transport system inner membrane component HLK66_07560 PF09084 NMT1/THI5 like HLK66_07565 PF03323 Bacillus/Clostridium GerA spore germination protein HLK66_07570 PF00356 Bacterial regulatory proteins, lacI family HLK66_07575 PF00528 Binding-protein-dependent transport system inner membrane component HLK66_07580 PF00528 Binding-protein-dependent transport system inner membrane component HLK66_07590 PF00251 Glycosyl hydrolases family 32 N-terminal domain HLK66_07590 PF08244 Glycosyl hydrolases family 32 C terminal HLK66_07595 PF00294 pfkB family carbohydrate kinase HLK66_07600 PF00251 Glycosyl hydrolases family 32 N-terminal domain HLK66_07600 PF08244 Glycosyl hydrolases family 32 C terminal HLK66_07605 PF08244 Glycosyl hydrolases family 32 C terminal HLK66_07605 PF00251 Glycosyl hydrolases family 32 N-terminal domain HLK66_07610 PF02435 Levansucrase/Invertase HLK66_07615 PF01547 Bacterial extracellular solute-binding protein HLK66_07620 PF12833 Helix-turn-helix domain HLK66_07620 PF00072 Response regulator receiver domain HLK66_07625 PF06580 Histidine kinase HLK66_07625 PF02743 Cache domain HLK66_07625 PF00672 HAMP domain HLK66_07625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HLK66_07635 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain HLK66_07635 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase HLK66_07640 PF07690 Major Facilitator Superfamily HLK66_07655 PF00753 Metallo-beta-lactamase superfamily HLK66_07660 PF00232 Glycosyl hydrolase family 1 HLK66_07665 PF07992 Pyridine nucleotide-disulphide oxidoreductase HLK66_07665 PF04324 BFD-like [2Fe-2S] binding domain HLK66_07665 PF01077 Nitrite and sulphite reductase 4Fe-4S domain HLK66_07665 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain HLK66_07665 PF18267 Rubredoxin NAD+ reductase C-terminal domain HLK66_07670 PF00355 Rieske [2Fe-2S] domain HLK66_07675 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HLK66_07680 PF01903 CbiX HLK66_07685 PF01226 Formate/nitrite transporter HLK66_07690 PF00158 Sigma-54 interaction domain HLK66_07690 PF01590 GAF domain HLK66_07695 PF03060 Nitronate monooxygenase HLK66_07700 PF07690 Major Facilitator Superfamily HLK66_07705 PF01144 Coenzyme A transferase HLK66_07730 PF07683 Cobalamin synthesis protein cobW C-terminal domain HLK66_07730 PF02492 CobW/HypB/UreG, nucleotide-binding domain HLK66_07735 PF00253 Ribosomal protein S14p/S29e HLK66_07740 PF01197 Ribosomal protein L31 HLK66_07745 PF00274 Fructose-bisphosphate aldolase class-I HLK66_07765 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HLK66_07775 PF00571 CBS domain HLK66_07775 PF01380 SIS domain HLK66_07780 PF00701 Dihydrodipicolinate synthetase family HLK66_07790 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HLK66_07795 PF12833 Helix-turn-helix domain HLK66_07800 PF00528 Binding-protein-dependent transport system inner membrane component HLK66_07805 PF00528 Binding-protein-dependent transport system inner membrane component HLK66_07815 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HLK66_07815 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HLK66_07825 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HLK66_07825 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HLK66_07835 PF01261 Xylose isomerase-like TIM barrel HLK66_07840 PF07486 Cell Wall Hydrolase HLK66_07850 PF00005 ABC transporter HLK66_07865 PF04069 Substrate binding domain of ABC-type glycine betaine transport system HLK66_07870 PF00571 CBS domain HLK66_07870 PF00005 ABC transporter HLK66_07875 PF07883 Cupin domain HLK66_07875 PF12833 Helix-turn-helix domain HLK66_07880 PF13416 Bacterial extracellular solute-binding protein HLK66_07885 PF00528 Binding-protein-dependent transport system inner membrane component HLK66_07890 PF00528 Binding-protein-dependent transport system inner membrane component HLK66_07895 PF08532 Beta-galactosidase trimerisation domain HLK66_07895 PF08533 Beta-galactosidase C-terminal domain HLK66_07895 PF02449 Beta-galactosidase HLK66_07900 PF05958 tRNA (Uracil-5-)-methyltransferase HLK66_07900 PF01938 TRAM domain HLK66_07905 PF07486 Cell Wall Hydrolase HLK66_07915 PF01614 Bacterial transcriptional regulator HLK66_07915 PF09339 IclR helix-turn-helix domain HLK66_07920 PF00701 Dihydrodipicolinate synthetase family HLK66_07925 PF00920 Dehydratase family HLK66_07935 PF04616 Glycosyl hydrolases family 43 HLK66_07935 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain HLK66_07950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HLK66_07950 PF03466 LysR substrate binding domain HLK66_07970 PF17912 MalK OB fold domain HLK66_07970 PF03459 TOBE domain HLK66_07970 PF00005 ABC transporter HLK66_07975 PF00528 Binding-protein-dependent transport system inner membrane component HLK66_07985 PF13416 Bacterial extracellular solute-binding protein HLK66_07990 PF03009 Glycerophosphoryl diester phosphodiesterase family HLK66_07995 PF03009 Glycerophosphoryl diester phosphodiesterase family HLK66_08010 PF00348 Polyprenyl synthetase HLK66_08015 PF12706 Beta-lactamase superfamily domain HLK66_08025 PF01425 Amidase HLK66_08045 PF17853 GGDEF-like domain HLK66_08045 PF07905 Purine catabolism regulatory protein-like family HLK66_08045 PF13556 PucR C-terminal helix-turn-helix domain HLK66_08050 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin HLK66_08070 PF02517 CPBP intramembrane metalloprotease HLK66_08075 PF06508 Queuosine biosynthesis protein QueC HLK66_08080 PF01242 6-pyruvoyl tetrahydropterin synthase HLK66_08085 PF04055 Radical SAM superfamily HLK66_08090 PF01227 GTP cyclohydrolase I HLK66_08095 PF00375 Sodium:dicarboxylate symporter family HLK66_08100 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain HLK66_08100 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain HLK66_08120 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain HLK66_08120 PF02777 Iron/manganese superoxide dismutases, C-terminal domain HLK66_08125 PF03358 NADPH-dependent FMN reductase HLK66_08135 PF00528 Binding-protein-dependent transport system inner membrane component HLK66_08140 PF00528 Binding-protein-dependent transport system inner membrane component HLK66_08145 PF04616 Glycosyl hydrolases family 43 HLK66_08145 PF16369 C-terminal lipocalin-like domain HLK66_08150 PF04854 Protein of unknown function, DUF624 HLK66_08155 PF04616 Glycosyl hydrolases family 43 HLK66_08155 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain HLK66_08160 PF02954 Bacterial regulatory protein, Fis family HLK66_08160 PF00158 Sigma-54 interaction domain HLK66_08160 PF13188 PAS domain HLK66_08165 PF03812 2-keto-3-deoxygluconate permease HLK66_08170 PF07005 Sugar-binding N-terminal domain HLK66_08170 PF17042 Nucleotide-binding C-terminal domain HLK66_08175 PF04166 Pyridoxal phosphate biosynthetic protein PdxA HLK66_08180 PF12833 Helix-turn-helix domain HLK66_08190 PF02028 BCCT, betaine/carnitine/choline family transporter HLK66_08200 PF01416 tRNA pseudouridine synthase HLK66_08205 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain HLK66_08205 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family HLK66_08205 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain HLK66_08210 PF01467 Cytidylyltransferase-like HLK66_08215 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HLK66_08215 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HLK66_08215 PF01842 ACT domain HLK66_08220 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase HLK66_08220 PF14572 Phosphoribosyl synthetase-associated domain HLK66_08225 PF00324 Amino acid permease HLK66_08230 PF00005 ABC transporter HLK66_08250 PF01522 Polysaccharide deacetylase HLK66_08250 PF03422 Carbohydrate binding module (family 6) HLK66_08250 PF00457 Glycosyl hydrolases family 11 HLK66_08260 PF00072 Response regulator receiver domain HLK66_08260 PF00486 Transcriptional regulatory protein, C terminal HLK66_08265 PF00512 His Kinase A (phospho-acceptor) domain HLK66_08265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HLK66_08265 PF00672 HAMP domain HLK66_08270 PF00005 ABC transporter HLK66_08280 PF08003 Protein of unknown function (DUF1698) HLK66_08290 PF00171 Aldehyde dehydrogenase family HLK66_08295 PF08281 Sigma-70, region 4 HLK66_08295 PF04542 Sigma-70 region 2 HLK66_08320 PF00356 Bacterial regulatory proteins, lacI family HLK66_08325 PF16657 Maltogenic Amylase, C-terminal domain HLK66_08325 PF00128 Alpha amylase, catalytic domain HLK66_08330 PF01263 Aldose 1-epimerase HLK66_08335 PF00528 Binding-protein-dependent transport system inner membrane component HLK66_08340 PF00528 Binding-protein-dependent transport system inner membrane component HLK66_08350 PF05336 L-rhamnose mutarotase HLK66_08355 PF04854 Protein of unknown function, DUF624 HLK66_08370 PF02743 Cache domain HLK66_08370 PF00672 HAMP domain HLK66_08370 PF06580 Histidine kinase HLK66_08370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HLK66_08375 PF00072 Response regulator receiver domain HLK66_08375 PF12833 Helix-turn-helix domain HLK66_08380 PF07470 Glycosyl Hydrolase Family 88 HLK66_08405 PF02517 CPBP intramembrane metalloprotease HLK66_08410 PF00082 Subtilase family HLK66_08415 PF00176 SNF2 family N-terminal domain HLK66_08415 PF04434 SWIM zinc finger HLK66_08415 PF00271 Helicase conserved C-terminal domain HLK66_08430 PF16924 Dipicolinate synthase subunit A N-terminal domain HLK66_08430 PF01262 Alanine dehydrogenase/PNT, C-terminal domain HLK66_08435 PF02805 Metal binding domain of Ada HLK66_08435 PF12833 Helix-turn-helix domain HLK66_08445 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HLK66_08445 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HLK66_08450 PF01261 Xylose isomerase-like TIM barrel HLK66_08455 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HLK66_08455 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HLK66_08460 PF01297 Zinc-uptake complex component A periplasmic HLK66_08470 PF07690 Major Facilitator Superfamily HLK66_08475 PF04542 Sigma-70 region 2 HLK66_08475 PF08281 Sigma-70, region 4 HLK66_08485 PF01098 Cell cycle protein HLK66_08495 PF03466 LysR substrate binding domain HLK66_08495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HLK66_08500 PF08240 Alcohol dehydrogenase GroES-like domain HLK66_08500 PF00107 Zinc-binding dehydrogenase HLK66_08505 PF07690 Major Facilitator Superfamily HLK66_08510 PF00440 Bacterial regulatory proteins, tetR family HLK66_08510 PF16925 Tetracyclin repressor-like, C-terminal domain HLK66_08515 PF00324 Amino acid permease HLK66_08520 PF00512 His Kinase A (phospho-acceptor) domain HLK66_08520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HLK66_08525 PF07849 Protein of unknown function (DUF1641) HLK66_08530 PF07992 Pyridine nucleotide-disulphide oxidoreductase HLK66_08535 PF05504 Spore germination B3/ GerAC like, C-terminal HLK66_08540 PF00881 Nitroreductase family HLK66_08545 PF17763 Glutaminase/Asparaginase C-terminal domain HLK66_08545 PF00710 Asparaginase, N-terminal HLK66_08550 PF05036 Sporulation related domain HLK66_08550 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase HLK66_08550 PF08239 Bacterial SH3 domain HLK66_08555 PF01266 FAD dependent oxidoreductase HLK66_08560 PF00877 NlpC/P60 family HLK66_08565 PF00005 ABC transporter HLK66_08570 PF00950 ABC 3 transport family HLK66_08575 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HLK66_08580 PF00528 Binding-protein-dependent transport system inner membrane component HLK66_08585 PF00528 Binding-protein-dependent transport system inner membrane component HLK66_08590 PF00005 ABC transporter HLK66_08600 PF02872 5'-nucleotidase, C-terminal domain HLK66_08600 PF00149 Calcineurin-like phosphoesterase HLK66_08605 PF07722 Peptidase C26 HLK66_08610 PF00381 PTS HPr component phosphorylation site HLK66_08615 PF00005 ABC transporter HLK66_08635 PF15975 Flotillin HLK66_08635 PF01145 SPFH domain / Band 7 family HLK66_08640 PF04069 Substrate binding domain of ABC-type glycine betaine transport system HLK66_08645 PF00528 Binding-protein-dependent transport system inner membrane component HLK66_08650 PF00005 ABC transporter HLK66_08650 PF00571 CBS domain HLK66_08660 PF09680 Family of unknown function HLK66_08670 PF02146 Sir2 family HLK66_08675 PF16658 Class II release factor RF3, C-terminal domain HLK66_08675 PF00009 Elongation factor Tu GTP binding domain HLK66_08675 PF03144 Elongation factor Tu domain 2 HLK66_08680 PF00497 Bacterial extracellular solute-binding proteins, family 3 HLK66_08685 PF00528 Binding-protein-dependent transport system inner membrane component HLK66_08695 PF00005 ABC transporter HLK66_08705 PF03741 Integral membrane protein TerC family HLK66_08710 PF00269 Small, acid-soluble spore proteins, alpha/beta type HLK66_08715 PF02386 Cation transport protein HLK66_08730 PF01757 Acyltransferase family HLK66_08735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HLK66_08735 PF00512 His Kinase A (phospho-acceptor) domain HLK66_08735 PF00989 PAS fold HLK66_08735 PF13188 PAS domain HLK66_08735 PF13426 PAS domain HLK66_08745 PF00795 Carbon-nitrogen hydrolase HLK66_08760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HLK66_08760 PF00512 His Kinase A (phospho-acceptor) domain HLK66_08760 PF02743 Cache domain HLK66_08765 PF01047 MarR family HLK66_08775 PF00004 ATPase family associated with various cellular activities (AAA) HLK66_08775 PF07724 AAA domain (Cdc48 subfamily) HLK66_08775 PF17871 AAA lid domain HLK66_08775 PF10431 C-terminal, D2-small domain, of ClpB protein HLK66_08785 PF05167 Uncharacterised ACR (DUF711) HLK66_08795 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) HLK66_08810 PF00381 PTS HPr component phosphorylation site HLK66_08815 PF00391 PEP-utilising enzyme, mobile domain HLK66_08815 PF02896 PEP-utilising enzyme, TIM barrel domain HLK66_08815 PF05524 PEP-utilising enzyme, N-terminal HLK66_08820 PF00690 Cation transporter/ATPase, N-terminus HLK66_08820 PF00689 Cation transporting ATPase, C-terminus HLK66_08825 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HLK66_08825 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase HLK66_08830 PF00155 Aminotransferase class I and II HLK66_08850 PF01584 CheW-like domain HLK66_08850 PF00072 Response regulator receiver domain HLK66_08860 PF14177 YkyB-like protein HLK66_08865 PF03707 Bacterial signalling protein N terminal repeat HLK66_08865 PF00563 EAL domain HLK66_08865 PF00990 Diguanylate cyclase, GGDEF domain HLK66_08870 PF13529 Peptidase_C39 like family HLK66_08875 PF00563 EAL domain HLK66_08875 PF10388 EAL-domain associated signalling protein domain HLK66_08890 PF08796 Protein of unknown function (DUF1797) HLK66_08900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HLK66_08900 PF03466 LysR substrate binding domain HLK66_08905 PF14602 Hexapeptide repeat of succinyl-transferase HLK66_08905 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal HLK66_08905 PF00132 Bacterial transferase hexapeptide (six repeats) HLK66_08915 PF00924 Mechanosensitive ion channel HLK66_08920 PF01695 IstB-like ATP binding protein HLK66_08930 PF00578 AhpC/TSA family HLK66_08935 PF02254 TrkA-N domain HLK66_08935 PF02080 TrkA-C domain HLK66_08940 PF01797 Transposase IS200 like HLK66_08945 PF00753 Metallo-beta-lactamase superfamily HLK66_08945 PF17770 Ribonuclease J C-terminal domain HLK66_08945 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain HLK66_08955 PF01327 Polypeptide deformylase HLK66_08965 PF00676 Dehydrogenase E1 component HLK66_08970 PF02780 Transketolase, C-terminal domain HLK66_08970 PF02779 Transketolase, pyrimidine binding domain HLK66_08975 PF02817 e3 binding domain HLK66_08975 PF00364 Biotin-requiring enzyme HLK66_08975 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HLK66_08980 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HLK66_08980 PF07992 Pyridine nucleotide-disulphide oxidoreductase HLK66_08995 PF01276 Orn/Lys/Arg decarboxylase, major domain HLK66_08995 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain HLK66_09000 PF05256 Uncharacterised protein family (UPF0223) HLK66_09005 PF06335 Protein of unknown function (DUF1054) HLK66_09015 PF00459 Inositol monophosphatase family HLK66_09030 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) HLK66_09035 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) HLK66_09040 PF13638 PIN domain HLK66_09040 PF02562 PhoH-like protein HLK66_09050 PF07408 Protein of unknown function (DUF1507) HLK66_09055 PF01098 Cell cycle protein HLK66_09060 PF01040 UbiA prenyltransferase family HLK66_09070 PF00188 Cysteine-rich secretory protein family HLK66_09070 PF14504 CAP-associated N-terminal HLK66_09080 PF14003 YlbE-like protein HLK66_09090 PF06133 Control of competence regulator ComK, YlbF/YmcA HLK66_09095 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) HLK66_09105 PF01467 Cytidylyltransferase-like HLK66_09110 PF07670 Nucleoside recognition HLK66_09115 PF01734 Patatin-like phospholipase HLK66_09120 PF05636 HIGH Nucleotidyl Transferase HLK66_09125 PF02620 Large ribosomal RNA subunit accumulation protein YceD HLK66_09130 PF01783 Ribosomal L32p protein family HLK66_09135 PF04463 Protein of unknown function (DUF523) HLK66_09155 PF10079 Bacillithiol biosynthesis BshC HLK66_09160 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) HLK66_09165 PF02381 MraZ protein, putative antitoxin-like HLK66_09170 PF01795 MraW methylase family HLK66_09190 PF03717 Penicillin-binding Protein dimerisation domain HLK66_09190 PF00905 Penicillin binding protein transpeptidase domain HLK66_09190 PF03793 PASTA domain HLK66_09195 PF08245 Mur ligase middle domain HLK66_09195 PF01225 Mur ligase family, catalytic domain HLK66_09195 PF02875 Mur ligase family, glutamate ligase domain HLK66_09205 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 HLK66_09205 PF00953 Glycosyl transferase family 4 HLK66_09210 PF02875 Mur ligase family, glutamate ligase domain HLK66_09210 PF08245 Mur ligase middle domain HLK66_09215 PF01098 Cell cycle protein HLK66_09220 PF03033 Glycosyltransferase family 28 N-terminal domain HLK66_09220 PF04101 Glycosyltransferase family 28 C-terminal domain HLK66_09225 PF08478 POTRA domain, FtsQ-type HLK66_09230 PF05949 Bacterial protein of unknown function (DUF881) HLK66_09235 PF05949 Bacterial protein of unknown function (DUF881) HLK66_09240 PF06947 Protein of unknown function (DUF1290) HLK66_09245 PF02491 SHS2 domain inserted in FTSA HLK66_09250 PF12327 FtsZ family, C-terminal domain HLK66_09250 PF00091 Tubulin/FtsZ family, GTPase domain HLK66_09255 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) HLK66_09260 PF03419 Sporulation factor SpoIIGA HLK66_09265 PF04545 Sigma-70, region 4 HLK66_09265 PF04542 Sigma-70 region 2 HLK66_09270 PF04545 Sigma-70, region 4 HLK66_09270 PF04542 Sigma-70 region 2 HLK66_09270 PF04539 Sigma-70 region 3 HLK66_09280 PF01168 Alanine racemase, N-terminal domain HLK66_09285 PF04472 Cell division protein SepF HLK66_09290 PF02325 YGGT family HLK66_09295 PF17774 Putative RNA-binding domain in YlmH HLK66_09295 PF01479 S4 domain HLK66_09300 PF05103 DivIVA protein HLK66_09305 PF06827 Zinc finger found in FPG and IleRS HLK66_09305 PF00133 tRNA synthetases class I (I, L, M and V) HLK66_09305 PF08264 Anticodon-binding domain of tRNA HLK66_09310 PF01258 Prokaryotic dksA/traR C4-type zinc finger HLK66_09315 PF01252 Signal peptidase (SPase) II HLK66_09320 PF00849 RNA pseudouridylate synthase HLK66_09320 PF01479 S4 domain HLK66_09325 PF00156 Phosphoribosyl transferase domain HLK66_09330 PF00860 Permease family HLK66_09335 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HLK66_09335 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HLK66_09345 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain HLK66_09345 PF00117 Glutamine amidotransferase class-I HLK66_09350 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HLK66_09350 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain HLK66_09350 PF02142 MGS-like domain HLK66_09355 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B HLK66_09355 PF00970 Oxidoreductase FAD-binding domain HLK66_09360 PF01180 Dihydroorotate dehydrogenase HLK66_09365 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family HLK66_09370 PF00156 Phosphoribosyl transferase domain HLK66_09375 PF05670 NFACT protein RNA binding domain HLK66_09380 PF00689 Cation transporting ATPase, C-terminus HLK66_09380 PF00690 Cation transporter/ATPase, N-terminus HLK66_09385 PF08340 Domain of unknown function (DUF1732) HLK66_09385 PF03755 YicC-like family, N-terminal region HLK66_09390 PF04025 Domain of unknown function (DUF370) HLK66_09395 PF00625 Guanylate kinase HLK66_09400 PF01192 RNA polymerase Rpb6 HLK66_09405 PF04127 DNA / pantothenate metabolism flavoprotein HLK66_09405 PF02441 Flavoprotein HLK66_09410 PF00271 Helicase conserved C-terminal domain HLK66_09410 PF17764 3′ DNA-binding domain (3′BD) HLK66_09410 PF18074 Primosomal protein N C-terminal domain HLK66_09410 PF18319 PriA DNA helicase Cys-rich region (CRR) domain HLK66_09410 PF04851 Type III restriction enzyme, res subunit HLK66_09425 PF00528 Binding-protein-dependent transport system inner membrane component HLK66_09430 PF00528 Binding-protein-dependent transport system inner membrane component HLK66_09440 PF02836 Glycosyl hydrolases family 2, TIM barrel domain HLK66_09440 PF16355 Domain of unknown function (DUF4982) HLK66_09440 PF02837 Glycosyl hydrolases family 2, sugar binding domain HLK66_09440 PF00703 Glycosyl hydrolases family 2 HLK66_09445 PF00703 Glycosyl hydrolases family 2 HLK66_09445 PF16355 Domain of unknown function (DUF4982) HLK66_09445 PF02837 Glycosyl hydrolases family 2, sugar binding domain HLK66_09445 PF02836 Glycosyl hydrolases family 2, TIM barrel domain HLK66_09450 PF01327 Polypeptide deformylase HLK66_09455 PF00551 Formyl transferase HLK66_09455 PF02911 Formyl transferase, C-terminal domain HLK66_09460 PF01029 NusB family HLK66_09460 PF01189 16S rRNA methyltransferase RsmB/F HLK66_09465 PF04055 Radical SAM superfamily HLK66_09475 PF03793 PASTA domain HLK66_09475 PF00069 Protein kinase domain HLK66_09480 PF16745 RsgA N-terminal domain HLK66_09480 PF03193 RsgA GTPase HLK66_09485 PF04263 Thiamin pyrophosphokinase, catalytic domain HLK66_09485 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain HLK66_09490 PF08183 Stage V sporulation protein family HLK66_09495 PF00830 Ribosomal L28 family HLK66_09500 PF03780 Asp23 family, cell envelope-related function HLK66_09505 PF02734 DAK2 domain HLK66_09505 PF13684 Dihydroxyacetone kinase family HLK66_09510 PF01842 ACT domain HLK66_09510 PF03315 Serine dehydratase beta chain HLK66_09515 PF03313 Serine dehydratase alpha chain HLK66_09525 PF08279 HTH domain HLK66_09525 PF01575 MaoC like domain HLK66_09530 PF02504 Fatty acid synthesis protein HLK66_09535 PF00698 Acyl transferase domain HLK66_09545 PF00550 Phosphopantetheine attachment site HLK66_09550 PF00035 Double-stranded RNA binding motif HLK66_09550 PF14622 Ribonuclease-III-like HLK66_09555 PF06470 SMC proteins Flexible Hinge Domain HLK66_09555 PF02463 RecF/RecN/SMC N terminal domain HLK66_09560 PF02881 SRP54-type protein, helical bundle domain HLK66_09560 PF00448 SRP54-type protein, GTPase domain HLK66_09575 PF00005 ABC transporter HLK66_09590 PF07726 ATPase family associated with various cellular activities (AAA) HLK66_09590 PF17863 AAA lid domain HLK66_09610 PF04297 Putative helix-turn-helix protein, YlxM / p13 like HLK66_09615 PF02978 Signal peptide binding domain HLK66_09615 PF00448 SRP54-type protein, GTPase domain HLK66_09615 PF02881 SRP54-type protein, helical bundle domain HLK66_09620 PF00886 Ribosomal protein S16 HLK66_09630 PF11068 YlqD protein HLK66_09635 PF01782 RimM N-terminal domain HLK66_09635 PF05239 PRC-barrel domain HLK66_09640 PF01746 tRNA (Guanine-1)-methyltransferase HLK66_09645 PF01245 Ribosomal protein L19 HLK66_09650 PF10502 Signal peptidase, peptidase S26 HLK66_09655 PF01926 50S ribosome-binding GTPase HLK66_09660 PF01351 Ribonuclease HII HLK66_09670 PF01312 FlhB HrpN YscU SpaS Family HLK66_09675 PF00549 CoA-ligase HLK66_09675 PF08442 ATP-grasp domain HLK66_09680 PF02629 CoA binding domain HLK66_09680 PF00549 CoA-ligase HLK66_09685 PF02481 DNA recombination-mediator protein A HLK66_09690 PF01131 DNA topoisomerase HLK66_09690 PF01396 Topoisomerase DNA binding C4 zinc finger HLK66_09690 PF01751 Toprim domain HLK66_09695 PF00589 Phage integrase family HLK66_09695 PF02899 Phage integrase, N-terminal SAM-like domain HLK66_09700 PF00227 Proteasome subunit HLK66_09705 PF07724 AAA domain (Cdc48 subfamily) HLK66_09705 PF00004 ATPase family associated with various cellular activities (AAA) HLK66_09705 PF10431 C-terminal, D2-small domain, of ClpB protein HLK66_09710 PF06018 CodY GAF-like domain HLK66_09710 PF08222 CodY helix-turn-helix domain HLK66_09715 PF00460 Flagella basal body rod protein HLK66_09720 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HLK66_09720 PF00460 Flagella basal body rod protein HLK66_09725 PF02049 Flagellar hook-basal body complex protein FliE HLK66_09730 PF01514 Secretory protein of YscJ/FliF family HLK66_09730 PF08345 Flagellar M-ring protein C-terminal HLK66_09735 PF14842 FliG N-terminal domain HLK66_09735 PF14841 FliG middle domain HLK66_09735 PF01706 FliG C-terminal domain HLK66_09740 PF02108 Flagellar assembly protein FliH HLK66_09745 PF18269 T3SS EscN ATPase C-terminal domain HLK66_09745 PF02874 ATP synthase alpha/beta family, beta-barrel domain HLK66_09745 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HLK66_09750 PF02050 Flagellar FliJ protein HLK66_09765 PF03963 Flagellar hook capping protein - N-terminal region HLK66_09775 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HLK66_09775 PF00460 Flagella basal body rod protein HLK66_09780 PF06289 Flagellar and Swarming motility proteins HLK66_09785 PF03748 Flagellar basal body-associated protein FliL HLK66_09790 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term HLK66_09790 PF02154 Flagellar motor switch protein FliM HLK66_09795 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term HLK66_09795 PF04509 CheC-like family HLK66_09800 PF00072 Response regulator receiver domain HLK66_09805 PF04347 Flagellar biosynthesis protein, FliO HLK66_09810 PF00813 FliP family HLK66_09815 PF01313 Bacterial export proteins, family 3 HLK66_09820 PF01311 Bacterial export proteins, family 1 HLK66_09825 PF01312 FlhB HrpN YscU SpaS Family HLK66_09830 PF00771 FHIPEP family HLK66_09835 PF00448 SRP54-type protein, GTPase domain HLK66_09840 PF10609 NUBPL iron-transfer P-loop NTPase HLK66_09845 PF00072 Response regulator receiver domain HLK66_09845 PF01339 CheB methylesterase HLK66_09850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HLK66_09850 PF02895 Signal transducing histidine kinase, homodimeric domain HLK66_09850 PF01584 CheW-like domain HLK66_09850 PF07194 P2 response regulator binding domain HLK66_09850 PF01627 Hpt domain HLK66_09855 PF01584 CheW-like domain HLK66_09860 PF04509 CheC-like family HLK66_09865 PF03975 CheD chemotactic sensory transduction HLK66_09870 PF04539 Sigma-70 region 3 HLK66_09870 PF04542 Sigma-70 region 2 HLK66_09870 PF04545 Sigma-70, region 4 HLK66_09885 PF00318 Ribosomal protein S2 HLK66_09890 PF00889 Elongation factor TS HLK66_09895 PF00696 Amino acid kinase family HLK66_09900 PF01765 Ribosome recycling factor HLK66_09905 PF01255 Putative undecaprenyl diphosphate synthase HLK66_09915 PF13288 DXP reductoisomerase C-terminal domain HLK66_09915 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase HLK66_09915 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain HLK66_09920 PF02163 Peptidase family M50 HLK66_09920 PF13180 PDZ domain HLK66_09925 PF03129 Anticodon binding domain HLK66_09925 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HLK66_09925 PF04073 Aminoacyl-tRNA editing domain HLK66_09930 PF00929 Exonuclease HLK66_09930 PF02811 PHP domain HLK66_09930 PF14579 Helix-hairpin-helix motif HLK66_09930 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HLK66_09930 PF07733 Bacterial DNA polymerase III alpha NTPase domain HLK66_09930 PF14480 DNA polymerase III polC-type N-terminus I HLK66_09930 PF11490 DNA polymerase III polC-type N-terminus II HLK66_09935 PF17384 RimP C-terminal SH3 domain HLK66_09935 PF02576 RimP N-terminal domain HLK66_09940 PF13184 NusA-like KH domain HLK66_09940 PF08529 NusA N-terminal domain HLK66_09940 PF00575 S1 RNA binding domain HLK66_09945 PF04296 Protein of unknown function (DUF448) HLK66_09950 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family HLK66_09955 PF11987 Translation-initiation factor 2 HLK66_09955 PF00009 Elongation factor Tu GTP binding domain HLK66_09955 PF04760 Translation initiation factor IF-2, N-terminal region HLK66_09960 PF04456 Protein of unknown function (DUF503) HLK66_09965 PF02033 Ribosome-binding factor A HLK66_09970 PF01509 TruB family pseudouridylate synthase (N terminal domain) HLK66_09970 PF16198 tRNA pseudouridylate synthase B C-terminal domain HLK66_09975 PF01687 Riboflavin kinase HLK66_09975 PF06574 FAD synthetase HLK66_09980 PF00312 Ribosomal protein S15 HLK66_09985 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain HLK66_09985 PF00013 KH domain HLK66_09985 PF03725 3' exoribonuclease family, domain 2 HLK66_09985 PF01138 3' exoribonuclease family, domain 1 HLK66_09985 PF00575 S1 RNA binding domain HLK66_09990 PF01522 Polysaccharide deacetylase HLK66_09995 PF05193 Peptidase M16 inactive domain HLK66_09995 PF00675 Insulinase (Peptidase family M16) HLK66_10000 PF16924 Dipicolinate synthase subunit A N-terminal domain HLK66_10000 PF01262 Alanine dehydrogenase/PNT, C-terminal domain HLK66_10005 PF02441 Flavoprotein HLK66_10010 PF02774 Semialdehyde dehydrogenase, dimerisation domain HLK66_10010 PF01118 Semialdehyde dehydrogenase, NAD binding domain HLK66_10015 PF00696 Amino acid kinase family HLK66_10015 PF13840 ACT domain HLK66_10020 PF00701 Dihydrodipicolinate synthetase family HLK66_10025 PF00324 Amino acid permease HLK66_10030 PF00753 Metallo-beta-lactamase superfamily HLK66_10030 PF17770 Ribonuclease J C-terminal domain HLK66_10030 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain HLK66_10035 PF00574 Clp protease HLK66_10040 PF14035 YlzJ-like protein HLK66_10050 PF17854 FtsK alpha domain HLK66_10050 PF09397 Ftsk gamma domain HLK66_10050 PF01580 FtsK/SpoIIIE family HLK66_10055 PF07702 UTRA domain HLK66_10055 PF00392 Bacterial regulatory proteins, gntR family HLK66_10080 PF00300 Histidine phosphatase superfamily (branch 1) HLK66_10090 PF05193 Peptidase M16 inactive domain HLK66_10095 PF00675 Insulinase (Peptidase family M16) HLK66_10095 PF05193 Peptidase M16 inactive domain HLK66_10105 PF11588 Protein of unknown function (DUF3243) HLK66_10110 PF11868 Protein of unknown function (DUF3388) HLK66_10115 PF13464 Domain of unknown function (DUF4115) HLK66_10120 PF01066 CDP-alcohol phosphatidyltransferase HLK66_10125 PF02464 Competence-damaged protein HLK66_10125 PF18146 Damage-inducible protein CinA KH domain HLK66_10125 PF00994 Probable molybdopterin binding domain HLK66_10130 PF00154 recA bacterial DNA recombination protein HLK66_10135 PF01966 HD domain HLK66_10135 PF00013 KH domain HLK66_10135 PF12072 Domain of unknown function (DUF3552) HLK66_10140 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) HLK66_10145 PF13277 YmdB-like protein HLK66_10150 PF04232 Stage V sporulation protein S (SpoVS) HLK66_10155 PF01244 Membrane dipeptidase (Peptidase family M19) HLK66_10160 PF04055 Radical SAM superfamily HLK66_10160 PF00919 Uncharacterized protein family UPF0004 HLK66_10160 PF01938 TRAM domain HLK66_10165 PF06133 Control of competence regulator ComK, YlbF/YmcA HLK66_10170 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) HLK66_10190 PF10628 Outer spore coat protein E (CotE) HLK66_10195 PF05901 Excalibur calcium-binding domain HLK66_10200 PF00488 MutS domain V HLK66_10200 PF05192 MutS domain III HLK66_10200 PF05188 MutS domain II HLK66_10200 PF05190 MutS family domain IV HLK66_10200 PF01624 MutS domain I HLK66_10205 PF08676 MutL C terminal dimerisation domain HLK66_10205 PF01119 DNA mismatch repair protein, C-terminal domain HLK66_10220 PF00874 PRD domain HLK66_10220 PF05043 Mga helix-turn-helix domain HLK66_10220 PF08279 HTH domain HLK66_10220 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HLK66_10230 PF00665 Integrase core domain HLK66_10230 PF13333 Integrase core domain HLK66_10230 PF13276 HTH-like domain HLK66_10235 PF05043 Mga helix-turn-helix domain HLK66_10235 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HLK66_10235 PF08279 HTH domain HLK66_10235 PF00874 PRD domain HLK66_10240 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit HLK66_10245 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HLK66_10250 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HLK66_10255 PF02378 Phosphotransferase system, EIIC HLK66_10275 PF12787 EcsC protein family HLK66_10285 PF09335 SNARE associated Golgi protein HLK66_10290 PF06146 Phosphate-starvation-inducible E HLK66_10300 PF00528 Binding-protein-dependent transport system inner membrane component HLK66_10300 PF12911 N-terminal TM domain of oligopeptide transport permease C HLK66_10310 PF00005 ABC transporter HLK66_10310 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HLK66_10315 PF01177 Asp/Glu/Hydantoin racemase HLK66_10320 PF07690 Major Facilitator Superfamily HLK66_10325 PF00583 Acetyltransferase (GNAT) family HLK66_10325 PF01047 MarR family HLK66_10330 PF00291 Pyridoxal-phosphate dependent enzyme HLK66_10335 PF03466 LysR substrate binding domain HLK66_10335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HLK66_10350 PF12867 DinB superfamily HLK66_10355 PF12833 Helix-turn-helix domain HLK66_10365 PF00440 Bacterial regulatory proteins, tetR family HLK66_10365 PF08359 YsiA-like protein, C-terminal region HLK66_10370 PF07486 Cell Wall Hydrolase HLK66_10405 PF13520 Amino acid permease HLK66_10440 PF00391 PEP-utilising enzyme, mobile domain HLK66_10440 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain HLK66_10445 PF01177 Asp/Glu/Hydantoin racemase HLK66_10450 PF00282 Pyridoxal-dependent decarboxylase conserved domain HLK66_10470 PF05223 NTF2-like N-terminal transpeptidase domain HLK66_10470 PF03717 Penicillin-binding Protein dimerisation domain HLK66_10470 PF00905 Penicillin binding protein transpeptidase domain HLK66_10475 PF03965 Penicillinase repressor HLK66_10480 PF00905 Penicillin binding protein transpeptidase domain HLK66_10480 PF05569 BlaR1 peptidase M56 HLK66_10500 PF01266 FAD dependent oxidoreductase HLK66_10500 PF00355 Rieske [2Fe-2S] domain HLK66_10505 PF10710 Protein of unknown function (DUF2512) HLK66_10520 PF07702 UTRA domain HLK66_10520 PF00392 Bacterial regulatory proteins, gntR family HLK66_10525 PF03610 PTS system fructose IIA component HLK66_10525 PF03830 PTS system sorbose subfamily IIB component HLK66_10530 PF03609 PTS system sorbose-specific iic component HLK66_10535 PF03613 PTS system mannose/fructose/sorbose family IID component HLK66_10540 PF03610 PTS system fructose IIA component HLK66_10540 PF03830 PTS system sorbose subfamily IIB component HLK66_10545 PF07470 Glycosyl Hydrolase Family 88 HLK66_10550 PF01301 Glycosyl hydrolases family 35 HLK66_10555 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain HLK66_10555 PF02278 Polysaccharide lyase family 8, super-sandwich domain HLK66_10555 PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain HLK66_10560 PF11553 Protein of unknown function (DUF3231) HLK66_10575 PF00106 short chain dehydrogenase HLK66_10585 PF12833 Helix-turn-helix domain HLK66_10585 PF06445 GyrI-like small molecule binding domain HLK66_10590 PF13302 Acetyltransferase (GNAT) domain HLK66_10620 PF05067 Manganese containing catalase HLK66_10635 PF08863 YolD-like protein HLK66_10645 PF13302 Acetyltransferase (GNAT) domain HLK66_10680 PF11798 IMS family HHH motif HLK66_10680 PF11799 impB/mucB/samB family C-terminal domain HLK66_10680 PF00817 impB/mucB/samB family HLK66_10685 PF08267 Cobalamin-independent synthase, N-terminal domain HLK66_10685 PF01717 Cobalamin-independent synthase, Catalytic domain HLK66_10690 PF01709 Transcriptional regulator HLK66_10700 PF13411 MerR HTH family regulatory protein HLK66_10700 PF07739 TipAS antibiotic-recognition domain HLK66_10730 PF13031 Protein of unknown function (DUF3892) HLK66_10740 PF00152 tRNA synthetases class II (D, K and N) HLK66_10740 PF01336 OB-fold nucleic acid binding domain HLK66_10750 PF00583 Acetyltransferase (GNAT) family HLK66_10755 PF07690 Major Facilitator Superfamily HLK66_10765 PF05163 DinB family HLK66_10790 PF00583 Acetyltransferase (GNAT) family HLK66_10810 PF00561 alpha/beta hydrolase fold HLK66_10815 PF00561 alpha/beta hydrolase fold HLK66_10830 PF00155 Aminotransferase class I and II HLK66_10830 PF00392 Bacterial regulatory proteins, gntR family HLK66_10870 PF12833 Helix-turn-helix domain HLK66_10870 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term HLK66_10875 PF00106 short chain dehydrogenase HLK66_10885 PF00440 Bacterial regulatory proteins, tetR family HLK66_10890 PF07690 Major Facilitator Superfamily HLK66_10905 PF00486 Transcriptional regulatory protein, C terminal HLK66_10905 PF00072 Response regulator receiver domain HLK66_10910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HLK66_10910 PF00512 His Kinase A (phospho-acceptor) domain HLK66_10910 PF00672 HAMP domain HLK66_10910 PF00989 PAS fold HLK66_10920 PF00293 NUDIX domain HLK66_10920 PF13344 Haloacid dehalogenase-like hydrolase HLK66_10970 PF00561 alpha/beta hydrolase fold HLK66_10995 PF06445 GyrI-like small molecule binding domain HLK66_10995 PF12833 Helix-turn-helix domain HLK66_11010 PF05746 DALR anticodon binding domain HLK66_11010 PF00750 tRNA synthetases class I (R) HLK66_11010 PF03485 Arginyl tRNA synthetase N terminal domain HLK66_11015 PF07987 Domain of unkown function (DUF1775) HLK66_11025 PF00155 Aminotransferase class I and II HLK66_11025 PF00392 Bacterial regulatory proteins, gntR family HLK66_11030 PF10787 Uncharacterised protein from bacillus cereus group HLK66_11035 PF00712 DNA polymerase III beta subunit, N-terminal domain HLK66_11035 PF02767 DNA polymerase III beta subunit, central domain HLK66_11035 PF02768 DNA polymerase III beta subunit, C-terminal domain HLK66_11040 PF03992 Antibiotic biosynthesis monooxygenase HLK66_11085 PF01695 IstB-like ATP binding protein HLK66_11090 PF00665 Integrase core domain HLK66_11100 PF13649 Methyltransferase domain HLK66_11120 PF00392 Bacterial regulatory proteins, gntR family HLK66_11120 PF00155 Aminotransferase class I and II HLK66_11125 PF00005 ABC transporter HLK66_11135 PF00158 Sigma-54 interaction domain HLK66_11135 PF02954 Bacterial regulatory protein, Fis family HLK66_11135 PF01590 GAF domain HLK66_11140 PF00676 Dehydrogenase E1 component HLK66_11145 PF02779 Transketolase, pyrimidine binding domain HLK66_11145 PF02780 Transketolase, C-terminal domain HLK66_11150 PF00364 Biotin-requiring enzyme HLK66_11150 PF02817 e3 binding domain HLK66_11150 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HLK66_11155 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HLK66_11155 PF07992 Pyridine nucleotide-disulphide oxidoreductase HLK66_11160 PF01521 Iron-sulphur cluster biosynthesis HLK66_11185 PF11188 Protein of unknown function (DUF2975) HLK66_11190 PF13443 Cro/C1-type HTH DNA-binding domain HLK66_11195 PF01255 Putative undecaprenyl diphosphate synthase HLK66_11200 PF01209 ubiE/COQ5 methyltransferase family HLK66_11210 PF00361 Proton-conducting membrane transporter HLK66_11210 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus HLK66_11215 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) HLK66_11225 PF10057 Uncharacterized conserved protein (DUF2294) HLK66_11275 PF00893 Small Multidrug Resistance protein HLK66_11280 PF00893 Small Multidrug Resistance protein HLK66_11285 PF00440 Bacterial regulatory proteins, tetR family HLK66_11285 PF17932 Tetracyclin repressor-like, C-terminal domain HLK66_11300 PF01738 Dienelactone hydrolase family HLK66_11320 PF01695 IstB-like ATP binding protein HLK66_11330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HLK66_11330 PF03466 LysR substrate binding domain HLK66_11380 PF00512 His Kinase A (phospho-acceptor) domain HLK66_11380 PF00989 PAS fold HLK66_11380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HLK66_11380 PF13426 PAS domain HLK66_11380 PF13188 PAS domain HLK66_11385 PF00293 NUDIX domain HLK66_11410 PF13419 Haloacid dehalogenase-like hydrolase HLK66_11435 PF00561 alpha/beta hydrolase fold HLK66_11445 PF14667 Polysaccharide biosynthesis C-terminal domain HLK66_11445 PF01943 Polysaccharide biosynthesis protein HLK66_11470 PF10997 Alternate to MurJ HLK66_11475 PF00583 Acetyltransferase (GNAT) family HLK66_11490 PF00266 Aminotransferase class-V HLK66_11495 PF00890 FAD binding domain HLK66_11495 PF02910 Fumarate reductase flavoprotein C-term HLK66_11500 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain HLK66_11500 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain HLK66_11505 PF02445 Quinolinate synthetase A protein HLK66_11520 PF17209 Hfq protein HLK66_11525 PF00004 ATPase family associated with various cellular activities (AAA) HLK66_11525 PF17866 AAA lid domain HLK66_11530 PF01926 50S ribosome-binding GTPase HLK66_11530 PF13167 GTP-binding GTPase N-terminal HLK66_11530 PF16360 GTP-binding GTPase Middle Region HLK66_11535 PF06838 Methionine gamma-lyase HLK66_11540 PF13411 MerR HTH family regulatory protein HLK66_11545 PF03951 Glutamine synthetase, beta-Grasp domain HLK66_11545 PF00120 Glutamine synthetase, catalytic domain HLK66_11565 PF02915 Rubrerythrin HLK66_11575 PF01569 PAP2 superfamily HLK66_11580 PF13302 Acetyltransferase (GNAT) domain HLK66_11600 PF02915 Rubrerythrin HLK66_11620 PF09680 Family of unknown function HLK66_11630 PF03641 Possible lysine decarboxylase HLK66_11640 PF12867 DinB superfamily HLK66_11645 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase HLK66_11645 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain HLK66_11655 PF00111 2Fe-2S iron-sulfur cluster binding domain HLK66_11655 PF01799 [2Fe-2S] binding domain HLK66_11670 PF04073 Aminoacyl-tRNA editing domain HLK66_11675 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) HLK66_11685 PF01726 LexA DNA binding domain HLK66_11685 PF00717 Peptidase S24-like HLK66_11690 PF01476 LysM domain HLK66_11695 PF00239 Resolvase, N terminal domain HLK66_11700 PF05979 Bacterial protein of unknown function (DUF896) HLK66_11705 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) HLK66_11710 PF02779 Transketolase, pyrimidine binding domain HLK66_11710 PF00456 Transketolase, thiamine diphosphate binding domain HLK66_11710 PF02780 Transketolase, C-terminal domain HLK66_11715 PF10747 Sporulation inhibitor of replication protein SirA HLK66_11720 PF03672 Uncharacterised protein family (UPF0154) HLK66_11740 PF00664 ABC transporter transmembrane region HLK66_11740 PF00005 ABC transporter HLK66_11745 PF00664 ABC transporter transmembrane region HLK66_11745 PF00005 ABC transporter HLK66_11755 PF02683 Cytochrome C biogenesis protein transmembrane region HLK66_11760 PF00072 Response regulator receiver domain HLK66_11765 PF07301 Protein of unknown function (DUF1453) HLK66_11795 PF00313 'Cold-shock' DNA-binding domain HLK66_11800 PF12320 Type 5 capsule protein repressor C-terminal domain HLK66_11800 PF00149 Calcineurin-like phosphoesterase HLK66_11810 PF13539 D-alanyl-D-alanine carboxypeptidase HLK66_11815 PF05343 M42 glutamyl aminopeptidase HLK66_11820 PF00884 Sulfatase HLK66_11825 PF13538 UvrD-like helicase C-terminal domain HLK66_11830 PF07687 Peptidase dimerisation domain HLK66_11830 PF01546 Peptidase family M20/M25/M40 HLK66_11840 PF04203 Sortase domain HLK66_11855 PF00583 Acetyltransferase (GNAT) family HLK66_11860 PF00392 Bacterial regulatory proteins, gntR family HLK66_11860 PF00155 Aminotransferase class I and II HLK66_11870 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) HLK66_11880 PF01258 Prokaryotic dksA/traR C4-type zinc finger HLK66_11890 PF07875 Coat F domain HLK66_11895 PF00107 Zinc-binding dehydrogenase HLK66_11895 PF13823 Alcohol dehydrogenase GroES-associated HLK66_11895 PF08240 Alcohol dehydrogenase GroES-like domain HLK66_11905 PF07875 Coat F domain HLK66_11910 PF11975 Family 4 glycosyl hydrolase C-terminal domain HLK66_11910 PF02056 Family 4 glycosyl hydrolase HLK66_11915 PF08179 Small acid-soluble spore protein P family HLK66_11925 PF00694 Aconitase C-terminal domain HLK66_11925 PF00330 Aconitase family (aconitate hydratase) HLK66_11930 PF00583 Acetyltransferase (GNAT) family HLK66_11940 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HLK66_11945 PF00155 Aminotransferase class I and II HLK66_11950 PF00120 Glutamine synthetase, catalytic domain HLK66_11950 PF03951 Glutamine synthetase, beta-Grasp domain HLK66_11955 PF02833 DHHA2 domain HLK66_11955 PF01368 DHH family HLK66_11960 PF00578 AhpC/TSA family HLK66_11965 PF13040 Fur-regulated basic protein B HLK66_11970 PF08177 Small acid-soluble spore protein N family HLK66_11975 PF17866 AAA lid domain HLK66_11975 PF00004 ATPase family associated with various cellular activities (AAA) HLK66_11995 PF01521 Iron-sulphur cluster biosynthesis HLK66_12000 PF09587 Bacterial capsule synthesis protein PGA_cap HLK66_12005 PF00512 His Kinase A (phospho-acceptor) domain HLK66_12005 PF02743 Cache domain HLK66_12005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HLK66_12010 PF02660 Glycerol-3-phosphate acyltransferase HLK66_12035 PF00795 Carbon-nitrogen hydrolase HLK66_12035 PF00583 Acetyltransferase (GNAT) family HLK66_12045 PF10026 Predicted Zn-dependent protease (DUF2268) HLK66_12050 PF01047 MarR family HLK66_12055 PF07690 Major Facilitator Superfamily HLK66_12060 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) HLK66_12065 PF13472 GDSL-like Lipase/Acylhydrolase family HLK66_12075 PF01797 Transposase IS200 like HLK66_12085 PF02310 B12 binding domain HLK66_12085 PF02607 B12 binding domain HLK66_12085 PF00809 Pterin binding enzyme HLK66_12085 PF02965 Vitamin B12 dependent methionine synthase, activation domain HLK66_12085 PF02574 Homocysteine S-methyltransferase HLK66_12090 PF02574 Homocysteine S-methyltransferase HLK66_12090 PF02219 Methylenetetrahydrofolate reductase HLK66_12095 PF01053 Cys/Met metabolism PLP-dependent enzyme HLK66_12100 PF01053 Cys/Met metabolism PLP-dependent enzyme HLK66_12105 PF08141 Small acid-soluble spore protein H family HLK66_12110 PF00486 Transcriptional regulatory protein, C terminal HLK66_12110 PF00072 Response regulator receiver domain HLK66_12115 PF18719 ArlS sensor domain HLK66_12115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HLK66_12115 PF00512 His Kinase A (phospho-acceptor) domain HLK66_12120 PF16870 2-oxoglutarate dehydrogenase C-terminal HLK66_12120 PF02779 Transketolase, pyrimidine binding domain HLK66_12120 PF00676 Dehydrogenase E1 component HLK66_12125 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HLK66_12125 PF00364 Biotin-requiring enzyme HLK66_12125 PF02817 e3 binding domain HLK66_12145 PF02537 CrcB-like protein, Camphor Resistance (CrcB) HLK66_12150 PF02537 CrcB-like protein, Camphor Resistance (CrcB) HLK66_12155 PF02096 60Kd inner membrane protein HLK66_12165 PF00857 Isochorismatase family HLK66_12175 PF02540 NAD synthase HLK66_12185 PF04055 Radical SAM superfamily HLK66_12190 PF01228 Glycine radical HLK66_12190 PF02901 Pyruvate formate lyase-like HLK66_12195 PF09924 Uncharacterised conserved protein (DUF2156) HLK66_12195 PF03706 Lysylphosphatidylglycerol synthase TM region HLK66_12200 PF00768 D-alanyl-D-alanine carboxypeptidase HLK66_12200 PF07943 Penicillin-binding protein 5, C-terminal domain HLK66_12205 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) HLK66_12210 PF00005 ABC transporter HLK66_12210 PF12848 ABC transporter HLK66_12215 PF01226 Formate/nitrite transporter HLK66_12240 PF00271 Helicase conserved C-terminal domain HLK66_12240 PF00270 DEAD/DEAH box helicase HLK66_12240 PF00570 HRDC domain HLK66_12240 PF16124 RecQ zinc-binding HLK66_12240 PF09382 RQC domain HLK66_12245 PF01411 tRNA synthetases class II (A) HLK66_12245 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HLK66_12245 PF02272 DHHA1 domain HLK66_12260 PF06725 3D domain HLK66_12260 PF01476 LysM domain HLK66_12275 PF02625 XdhC and CoxI family HLK66_12275 PF13478 XdhC Rossmann domain HLK66_12285 PF00941 FAD binding domain in molybdopterin dehydrogenase HLK66_12290 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase HLK66_12290 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain HLK66_12295 PF00111 2Fe-2S iron-sulfur cluster binding domain HLK66_12295 PF01799 [2Fe-2S] binding domain HLK66_12300 PF01014 Uricase HLK66_12300 PF09349 OHCU decarboxylase HLK66_12305 PF00576 HIUase/Transthyretin family HLK66_12310 PF01979 Amidohydrolase family HLK66_12315 PF02222 ATP-grasp domain HLK66_12320 PF07690 Major Facilitator Superfamily HLK66_12335 PF01063 Amino-transferase class IV HLK66_12355 PF01432 Peptidase family M3 HLK66_12355 PF08439 Oligopeptidase F HLK66_12360 PF03466 LysR substrate binding domain HLK66_12360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HLK66_12365 PF00310 Glutamine amidotransferases class-II HLK66_12365 PF01645 Conserved region in glutamate synthase HLK66_12365 PF01493 GXGXG motif HLK66_12365 PF04898 Glutamate synthase central domain HLK66_12370 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster HLK66_12370 PF07992 Pyridine nucleotide-disulphide oxidoreductase HLK66_12375 PF01966 HD domain HLK66_12385 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD HLK66_12390 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD HLK66_12400 PF03741 Integral membrane protein TerC family HLK66_12405 PF04308 Ribonuclease H-like HLK66_12420 PF10502 Signal peptidase, peptidase S26 HLK66_12430 PF00392 Bacterial regulatory proteins, gntR family HLK66_12435 PF00005 ABC transporter HLK66_12445 PF00589 Phage integrase family HLK66_12445 PF02899 Phage integrase, N-terminal SAM-like domain HLK66_12460 PF00885 6,7-dimethyl-8-ribityllumazine synthase HLK66_12465 PF00925 GTP cyclohydrolase II HLK66_12465 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase HLK66_12470 PF00677 Lumazine binding domain HLK66_12475 PF00753 Metallo-beta-lactamase superfamily HLK66_12480 PF03372 Endonuclease/Exonuclease/phosphatase family HLK66_12485 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HLK66_12495 PF04101 Glycosyltransferase family 28 C-terminal domain HLK66_12495 PF03033 Glycosyltransferase family 28 N-terminal domain HLK66_12500 PF00270 DEAD/DEAH box helicase HLK66_12500 PF00271 Helicase conserved C-terminal domain HLK66_12510 PF13426 PAS domain HLK66_12510 PF01740 STAS domain HLK66_12530 PF01638 HxlR-like helix-turn-helix HLK66_12535 PF02525 Flavodoxin-like fold HLK66_12540 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain HLK66_12540 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain HLK66_12540 PF06827 Zinc finger found in FPG and IleRS HLK66_12545 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family HLK66_12555 PF01693 Caulimovirus viroplasmin HLK66_12560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HLK66_12560 PF13492 GAF domain HLK66_12560 PF07694 5TMR of 5TMR-LYT HLK66_12560 PF06580 Histidine kinase HLK66_12565 PF00072 Response regulator receiver domain HLK66_12565 PF04397 LytTr DNA-binding domain HLK66_12570 PF13722 5TM C-terminal transporter carbon starvation CstA HLK66_12570 PF02554 Carbon starvation protein CstA HLK66_12575 PF00990 Diguanylate cyclase, GGDEF domain HLK66_12575 PF03707 Bacterial signalling protein N terminal repeat HLK66_12575 PF00563 EAL domain HLK66_12580 PF00563 EAL domain HLK66_12580 PF00990 Diguanylate cyclase, GGDEF domain HLK66_12580 PF03707 Bacterial signalling protein N terminal repeat HLK66_12585 PF04960 Glutaminase HLK66_12590 PF02675 S-adenosylmethionine decarboxylase HLK66_12600 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HLK66_12600 PF02743 Cache domain HLK66_12600 PF00672 HAMP domain HLK66_12605 PF09154 Domain of unknown function (DUF1939) HLK66_12605 PF00128 Alpha amylase, catalytic domain HLK66_12610 PF01810 LysE type translocator HLK66_12615 PF00557 Metallopeptidase family M24 HLK66_12625 PF13520 Amino acid permease HLK66_12650 PF13380 CoA binding domain HLK66_12650 PF13607 Succinyl-CoA ligase like flavodoxin domain HLK66_12650 PF00583 Acetyltransferase (GNAT) family HLK66_12655 PF06628 Catalase-related immune-responsive HLK66_12655 PF00199 Catalase HLK66_12660 PF00183 Hsp90 protein HLK66_12665 PF00753 Metallo-beta-lactamase superfamily HLK66_12670 PF01810 LysE type translocator HLK66_12675 PF00990 Diguanylate cyclase, GGDEF domain HLK66_12675 PF03707 Bacterial signalling protein N terminal repeat HLK66_12675 PF00563 EAL domain HLK66_12715 PF09323 Domain of unknown function (DUF1980) HLK66_12720 PF03773 Predicted permease HLK66_12725 PF01522 Polysaccharide deacetylase HLK66_12735 PF07992 Pyridine nucleotide-disulphide oxidoreductase HLK66_12740 PF00356 Bacterial regulatory proteins, lacI family HLK66_12745 PF08244 Glycosyl hydrolases family 32 C terminal HLK66_12745 PF00251 Glycosyl hydrolases family 32 N-terminal domain HLK66_12750 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 HLK66_12750 PF00367 phosphotransferase system, EIIB HLK66_12750 PF02378 Phosphotransferase system, EIIC HLK66_12755 PF16875 Glycosyl hydrolase family 36 N-terminal domain HLK66_12755 PF16874 Glycosyl hydrolase family 36 C-terminal domain HLK66_12760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HLK66_12760 PF03466 LysR substrate binding domain HLK66_12770 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HLK66_12775 PF00455 DeoR C terminal sensor domain HLK66_12775 PF08220 DeoR-like helix-turn-helix domain HLK66_12780 PF01965 DJ-1/PfpI family HLK66_12780 PF12833 Helix-turn-helix domain HLK66_12785 PF03576 Peptidase family S58 HLK66_12790 PF00881 Nitroreductase family HLK66_12795 PF00293 NUDIX domain HLK66_12800 PF05975 Bacterial ABC transporter protein EcsB HLK66_12805 PF00005 ABC transporter HLK66_12810 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HLK66_12810 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HLK66_12830 PF00300 Histidine phosphatase superfamily (branch 1) HLK66_12860 PF03989 DNA gyrase C-terminal domain, beta-propeller HLK66_12860 PF00521 DNA gyrase/topoisomerase IV, subunit A HLK66_12870 PF13380 CoA binding domain HLK66_12885 PF02743 Cache domain HLK66_12885 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HLK66_12885 PF00672 HAMP domain HLK66_12890 PF00704 Glycosyl hydrolases family 18 HLK66_12905 PF09515 Thiamine transporter protein (Thia_YuaJ) HLK66_12910 PF07690 Major Facilitator Superfamily HLK66_12915 PF16295 Tetracyclin repressor-like, C-terminal domain HLK66_12915 PF00440 Bacterial regulatory proteins, tetR family HLK66_12930 PF07454 Stage II sporulation protein P (SpoIIP) HLK66_12935 PF07977 FabA-like domain HLK66_12940 PF01553 Acyltransferase HLK66_12950 PF00455 DeoR C terminal sensor domain HLK66_12950 PF08220 DeoR-like helix-turn-helix domain HLK66_12965 PF01238 Phosphomannose isomerase type I HLK66_12970 PF17936 Bacterial Ig domain HLK66_12970 PF00082 Subtilase family HLK66_12975 PF07690 Major Facilitator Superfamily HLK66_13000 PF02632 BioY family HLK66_13005 PF05425 Copper resistance protein D HLK66_13005 PF13115 YtkA-like HLK66_13005 PF04234 CopC domain HLK66_13015 PF01545 Cation efflux family HLK66_13025 PF00296 Luciferase-like monooxygenase HLK66_13030 PF00149 Calcineurin-like phosphoesterase HLK66_13030 PF02872 5'-nucleotidase, C-terminal domain HLK66_13050 PF00085 Thioredoxin HLK66_13055 PF00311 Phosphoenolpyruvate carboxylase HLK66_13070 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 HLK66_13070 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) HLK66_13075 PF01037 Lrp/AsnC ligand binding domain HLK66_13075 PF13404 AsnC-type helix-turn-helix domain HLK66_13080 PF13419 Haloacid dehalogenase-like hydrolase HLK66_13085 PF10672 S-adenosylmethionine-dependent methyltransferase HLK66_13085 PF17785 PUA-like domain HLK66_13095 PF00574 Clp protease HLK66_13115 PF03551 Transcriptional regulator PadR-like family HLK66_13125 PF00171 Aldehyde dehydrogenase family HLK66_13130 PF00696 Amino acid kinase family HLK66_13130 PF01472 PUA domain HLK66_13140 PF13536 Putative multidrug resistance efflux transporter HLK66_13145 PF00664 ABC transporter transmembrane region HLK66_13145 PF00005 ABC transporter HLK66_13150 PF03466 LysR substrate binding domain HLK66_13150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HLK66_13155 PF00290 Tryptophan synthase alpha chain HLK66_13160 PF00291 Pyridoxal-phosphate dependent enzyme HLK66_13165 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase HLK66_13170 PF00218 Indole-3-glycerol phosphate synthase HLK66_13175 PF02885 Glycosyl transferase family, helical bundle domain HLK66_13175 PF00591 Glycosyl transferase family, a/b domain HLK66_13180 PF00591 Glycosyl transferase family, a/b domain HLK66_13180 PF02885 Glycosyl transferase family, helical bundle domain HLK66_13180 PF00117 Glutamine amidotransferase class-I HLK66_13185 PF04715 Anthranilate synthase component I, N terminal region HLK66_13185 PF00425 chorismate binding enzyme HLK66_13190 PF03473 MOSC domain HLK66_13190 PF03475 3-alpha domain HLK66_13195 PF07690 Major Facilitator Superfamily HLK66_13200 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HLK66_13200 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HLK66_13205 PF00294 pfkB family carbohydrate kinase HLK66_13210 PF08220 DeoR-like helix-turn-helix domain HLK66_13210 PF00455 DeoR C terminal sensor domain HLK66_13225 PF02811 PHP domain HLK66_13225 PF00929 Exonuclease HLK66_13225 PF07733 Bacterial DNA polymerase III alpha NTPase domain HLK66_13225 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HLK66_13225 PF14579 Helix-hairpin-helix motif HLK66_13235 PF00909 Ammonium Transporter Family HLK66_13245 PF02581 Thiamine monophosphate synthase HLK66_13250 PF08543 Phosphomethylpyrimidine kinase HLK66_13255 PF02110 Hydroxyethylthiazole kinase family HLK66_13265 PF03773 Predicted permease HLK66_13270 PF07683 Cobalamin synthesis protein cobW C-terminal domain HLK66_13270 PF02492 CobW/HypB/UreG, nucleotide-binding domain HLK66_13275 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HLK66_13275 PF00672 HAMP domain HLK66_13275 PF02743 Cache domain HLK66_13285 PF00149 Calcineurin-like phosphoesterase HLK66_13295 PF08141 Small acid-soluble spore protein H family HLK66_13305 PF00561 alpha/beta hydrolase fold HLK66_13310 PF00561 alpha/beta hydrolase fold HLK66_13325 PF01380 SIS domain HLK66_13330 PF01380 SIS domain HLK66_13330 PF01418 Helix-turn-helix domain, rpiR family HLK66_13335 PF00367 phosphotransferase system, EIIB HLK66_13335 PF02378 Phosphotransferase system, EIIC HLK66_13350 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family HLK66_13350 PF00356 Bacterial regulatory proteins, lacI family HLK66_13360 PF00253 Ribosomal protein S14p/S29e HLK66_13365 PF00471 Ribosomal protein L33 HLK66_13370 PF07683 Cobalamin synthesis protein cobW C-terminal domain HLK66_13370 PF02492 CobW/HypB/UreG, nucleotide-binding domain HLK66_13415 PF07661 MORN repeat variant HLK66_13480 PF05675 Protein of unknown function (DUF817) HLK66_13485 PF13443 Cro/C1-type HTH DNA-binding domain HLK66_13490 PF11188 Protein of unknown function (DUF2975) HLK66_13500 PF08818 Domain of unknown function (DU1801) HLK66_13505 PF08818 Domain of unknown function (DU1801) HLK66_13535 PF04542 Sigma-70 region 2 HLK66_13535 PF08281 Sigma-70, region 4 HLK66_13550 PF00805 Pentapeptide repeats (8 copies) HLK66_13575 PF04070 Domain of unknown function (DUF378) HLK66_13580 PF04286 Protein of unknown function (DUF445) HLK66_13585 PF00561 alpha/beta hydrolase fold HLK66_13600 PF02567 Phenazine biosynthesis-like protein HLK66_13605 PF01965 DJ-1/PfpI family HLK66_13615 PF01695 IstB-like ATP binding protein HLK66_13625 PF06445 GyrI-like small molecule binding domain HLK66_13625 PF12833 Helix-turn-helix domain HLK66_13630 PF01235 Sodium:alanine symporter family HLK66_13660 PF01139 tRNA-splicing ligase RtcB HLK66_13665 PF10086 YhfC intramembrane metalloprotease HLK66_13680 PF09335 SNARE associated Golgi protein HLK66_13685 PF13787 Protein of unknown function with HXXEE motif HLK66_13700 PF13302 Acetyltransferase (GNAT) domain HLK66_13710 PF00300 Histidine phosphatase superfamily (branch 1) HLK66_13715 PF13302 Acetyltransferase (GNAT) domain HLK66_13735 PF08264 Anticodon-binding domain of tRNA HLK66_13735 PF09334 tRNA synthetases class I (M) HLK66_13745 PF08000 Bacterial PH domain HLK66_13765 PF13739 Deacetylase PdaC HLK66_13765 PF01522 Polysaccharide deacetylase HLK66_13765 PF11738 Protein of unknown function (DUF3298) HLK66_13790 PF03466 LysR substrate binding domain HLK66_13790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HLK66_13795 PF03788 LrgA family HLK66_13800 PF04172 LrgB-like family HLK66_13820 PF00313 'Cold-shock' DNA-binding domain HLK66_13825 PF00271 Helicase conserved C-terminal domain HLK66_13825 PF00270 DEAD/DEAH box helicase HLK66_13830 PF00313 'Cold-shock' DNA-binding domain HLK66_13835 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain HLK66_13835 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain HLK66_13840 PF01266 FAD dependent oxidoreductase HLK66_13840 PF16901 C-terminal domain of alpha-glycerophosphate oxidase HLK66_13845 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HLK66_13845 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HLK66_13850 PF00230 Major intrinsic protein HLK66_13855 PF04309 Glycerol-3-phosphate responsive antiterminator HLK66_13860 PF01569 PAP2 superfamily HLK66_13865 PF02735 Ku70/Ku80 beta-barrel domain HLK66_13870 PF01068 ATP dependent DNA ligase domain HLK66_13880 PF01678 Diaminopimelate epimerase HLK66_13885 PF00563 EAL domain HLK66_13885 PF08668 HDOD domain HLK66_13890 PF00860 Permease family HLK66_13910 PF07992 Pyridine nucleotide-disulphide oxidoreductase HLK66_13910 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HLK66_13915 PF02040 Arsenical pump membrane protein HLK66_13920 PF01022 Bacterial regulatory protein, arsR family HLK66_13925 PF01554 MatE HLK66_13945 PF00188 Cysteine-rich secretory protein family HLK66_13960 PF02492 CobW/HypB/UreG, nucleotide-binding domain HLK66_13960 PF07683 Cobalamin synthesis protein cobW C-terminal domain HLK66_13965 PF01471 Putative peptidoglycan binding domain HLK66_13965 PF17820 PDZ domain HLK66_13965 PF03572 Peptidase family S41 HLK66_13970 PF02557 D-alanyl-D-alanine carboxypeptidase HLK66_13975 PF01048 Phosphorylase superfamily HLK66_13985 PF14162 YozD-like protein HLK66_14000 PF06855 YozE SAM-like fold HLK66_14010 PF01641 SelR domain HLK66_14015 PF01625 Peptide methionine sulfoxide reductase HLK66_14020 PF03193 RsgA GTPase HLK66_14035 PF13472 GDSL-like Lipase/Acylhydrolase family HLK66_14040 PF00989 PAS fold HLK66_14040 PF00512 His Kinase A (phospho-acceptor) domain HLK66_14040 PF13426 PAS domain HLK66_14040 PF13188 PAS domain HLK66_14040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HLK66_14045 PF02645 Uncharacterised protein, DegV family COG1307 HLK66_14050 PF00585 C-terminal regulatory domain of Threonine dehydratase HLK66_14050 PF00291 Pyridoxal-phosphate dependent enzyme HLK66_14055 PF03006 Haemolysin-III related HLK66_14060 PF03613 PTS system mannose/fructose/sorbose family IID component HLK66_14065 PF03609 PTS system sorbose-specific iic component HLK66_14070 PF03830 PTS system sorbose subfamily IIB component HLK66_14075 PF03610 PTS system fructose IIA component HLK66_14075 PF03830 PTS system sorbose subfamily IIB component HLK66_14085 PF07702 UTRA domain HLK66_14085 PF00392 Bacterial regulatory proteins, gntR family HLK66_14090 PF00186 Dihydrofolate reductase HLK66_14100 PF07737 Anthrax toxin lethal factor, N- and C-terminal domain HLK66_14105 PF02342 TerD domain HLK66_14110 PF02342 TerD domain HLK66_14115 PF05816 Toxic anion resistance protein (TelA) HLK66_14120 PF14266 Putative component of 'biosynthetic module' HLK66_14135 PF11202 Phosphoribosyl transferase (PRTase) HLK66_14135 PF15608 PELOTA RNA binding domain HLK66_14150 PF03741 Integral membrane protein TerC family HLK66_14155 PF02342 TerD domain HLK66_14160 PF14005 YpjP-like protein HLK66_14165 PF04445 Putative SAM-dependent methyltransferase HLK66_14170 PF06491 Disulphide isomerase HLK66_14175 PF08712 Scaffold protein Nfu/NifU N terminal HLK66_14175 PF13769 Virulence factor HLK66_14185 PF01966 HD domain HLK66_14205 PF00255 Glutathione peroxidase HLK66_14215 PF01268 Formate--tetrahydrofolate ligase HLK66_14220 PF04204 Homoserine O-succinyltransferase HLK66_14235 PF02742 Iron dependent repressor, metal binding and dimerisation domain HLK66_14235 PF01325 Iron dependent repressor, N-terminal DNA binding domain HLK66_14240 PF01751 Toprim domain HLK66_14240 PF01131 DNA topoisomerase HLK66_14245 PF06081 Aromatic acid exporter family member 1 HLK66_14245 PF11728 Putative aromatic acid exporter C-terminal domain HLK66_14260 PF00313 'Cold-shock' DNA-binding domain HLK66_14265 PF10782 Zinc-finger HLK66_14270 PF13456 Reverse transcriptase-like HLK66_14275 PF13456 Reverse transcriptase-like HLK66_14285 PF02681 Divergent PAP2 family HLK66_14295 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain HLK66_14295 PF01367 5'-3' exonuclease, C-terminal SAM fold HLK66_14305 PF00005 ABC transporter HLK66_14315 PF00581 Rhodanese-like domain HLK66_14320 PF00350 Dynamin family HLK66_14330 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) HLK66_14335 PF02074 Carboxypeptidase Taq (M32) metallopeptidase HLK66_14340 PF13307 Helicase C-terminal domain HLK66_14350 PF01170 Putative RNA methylase family UPF0020 HLK66_14350 PF02926 THUMP domain HLK66_14360 PF05103 DivIVA protein HLK66_14365 PF06908 YspA SLOG family HLK66_14370 PF11122 Inner spore coat protein D HLK66_14375 PF13482 RNase_H superfamily HLK66_14385 PF12697 Alpha/beta hydrolase family HLK66_14390 PF00011 Hsp20/alpha crystallin family HLK66_14395 PF14139 YpzG-like protein HLK66_14400 PF14179 YppG-like protein HLK66_14420 PF10720 Protein of unknown function (DUF2515) HLK66_14425 PF03838 Recombination protein U HLK66_14430 PF00905 Penicillin binding protein transpeptidase domain HLK66_14430 PF00912 Transglycosylase HLK66_14440 PF00633 Helix-hairpin-helix motif HLK66_14440 PF10576 Iron-sulfur binding domain of endonuclease III HLK66_14440 PF00730 HhH-GPD superfamily base excision DNA repair protein HLK66_14445 PF07261 Replication initiation and membrane attachment HLK66_14450 PF01336 OB-fold nucleic acid binding domain HLK66_14450 PF00152 tRNA synthetases class II (D, K and N) HLK66_14455 PF00155 Aminotransferase class I and II HLK66_14465 PF00929 Exonuclease HLK66_14465 PF13307 Helicase C-terminal domain HLK66_14465 PF04851 Type III restriction enzyme, res subunit HLK66_14470 PF02261 Aspartate decarboxylase HLK66_14475 PF02569 Pantoate-beta-alanine ligase HLK66_14480 PF02548 Ketopantoate hydroxymethyltransferase HLK66_14485 PF08279 HTH domain HLK66_14485 PF03099 Biotin/lipoate A/B protein ligase family HLK66_14485 PF02237 Biotin protein ligase C terminal domain HLK66_14490 PF12627 Probable RNA and SrmB- binding site of polymerase A HLK66_14490 PF13735 tRNA nucleotidyltransferase domain 2 putative HLK66_14490 PF01743 Poly A polymerase head domain HLK66_14495 PF00534 Glycosyl transferases group 1 HLK66_14495 PF13439 Glycosyltransferase Family 4 HLK66_14500 PF02585 GlcNAc-PI de-N-acetylase HLK66_14510 PF01113 Dihydrodipicolinate reductase, N-terminus HLK66_14510 PF05173 Dihydrodipicolinate reductase, C-terminus HLK66_14515 PF03819 MazG nucleotide pyrophosphohydrolase domain HLK66_14520 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 HLK66_14520 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) HLK66_14530 PF07690 Major Facilitator Superfamily HLK66_14535 PF04298 Putative neutral zinc metallopeptidase HLK66_14540 PF09577 Sporulation protein YpjB (SpoYpjB) HLK66_14545 PF07187 Protein of unknown function (DUF1405) HLK66_14550 PF08858 IDEAL domain HLK66_14550 PF08864 UPF0302 domain HLK66_14565 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HLK66_14570 PF01842 ACT domain HLK66_14570 PF02153 Prephenate dehydrogenase HLK66_14575 PF00155 Aminotransferase class I and II HLK66_14580 PF07736 Chorismate mutase type I HLK66_14585 PF01761 3-dehydroquinate synthase HLK66_14590 PF01264 Chorismate synthase HLK66_14595 PF03705 CheR methyltransferase, all-alpha domain HLK66_14595 PF01739 CheR methyltransferase, SAM binding domain HLK66_14600 PF00334 Nucleoside diphosphate kinase HLK66_14605 PF00348 Polyprenyl synthetase HLK66_14610 PF01209 ubiE/COQ5 methyltransferase family HLK66_14615 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 HLK66_14620 PF00216 Bacterial DNA-binding protein HLK66_14625 PF09547 Stage IV sporulation protein A (spore_IV_A) HLK66_14630 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus HLK66_14630 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus HLK66_14635 PF01926 50S ribosome-binding GTPase HLK66_14635 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal HLK66_14645 PF14045 YIEGIA protein HLK66_14650 PF14140 YpzI-like protein HLK66_14655 PF00575 S1 RNA binding domain HLK66_14660 PF02224 Cytidylate kinase HLK66_14675 PF14620 YpeB sporulation HLK66_14675 PF03413 Peptidase propeptide and YPEB domain HLK66_14680 PF01471 Putative peptidoglycan binding domain HLK66_14680 PF07486 Cell Wall Hydrolase HLK66_14685 PF13367 PrsW family intramembrane metalloprotease HLK66_14695 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain HLK66_14695 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase HLK66_14700 PF05389 Negative regulator of genetic competence (MecA) HLK66_14705 PF00149 Calcineurin-like phosphoesterase HLK66_14710 PF11007 Spore coat associated protein JA (CotJA) HLK66_14715 PF12652 CotJB protein HLK66_14720 PF05067 Manganese containing catalase HLK66_14735 PF02517 CPBP intramembrane metalloprotease HLK66_14740 PF00270 DEAD/DEAH box helicase HLK66_14740 PF00271 Helicase conserved C-terminal domain HLK66_14755 PF12822 ECF transporter, substrate-specific component HLK66_14760 PF01551 Peptidase family M23 HLK66_14775 PF08281 Sigma-70, region 4 HLK66_14775 PF04542 Sigma-70 region 2 HLK66_14780 PF00989 PAS fold HLK66_14780 PF18698 Histidine kinase sensor domain HLK66_14780 PF00512 His Kinase A (phospho-acceptor) domain HLK66_14780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HLK66_14780 PF00672 HAMP domain HLK66_14785 PF00072 Response regulator receiver domain HLK66_14785 PF00486 Transcriptional regulatory protein, C terminal HLK66_14790 PF01479 S4 domain HLK66_14790 PF00849 RNA pseudouridylate synthase HLK66_14795 PF07670 Nucleoside recognition HLK66_14800 PF07670 Nucleoside recognition HLK66_14805 PF00768 D-alanyl-D-alanine carboxypeptidase HLK66_14805 PF07943 Penicillin-binding protein 5, C-terminal domain HLK66_14810 PF02777 Iron/manganese superoxide dismutases, C-terminal domain HLK66_14810 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain HLK66_14815 PF04079 Segregation and condensation complex subunit ScpB HLK66_14820 PF02616 Segregation and condensation protein ScpA HLK66_14825 PF03745 Domain of unknown function (DUF309) HLK66_14830 PF00583 Acetyltransferase (GNAT) family HLK66_14835 PF06207 Protein of unknown function (DUF1002) HLK66_14845 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain HLK66_14845 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain HLK66_14850 PF03323 Bacillus/Clostridium GerA spore germination protein HLK66_14855 PF14097 Stage V sporulation protein AE1 HLK66_14860 PF13782 Stage V sporulation protein AB HLK66_14865 PF12164 Stage V sporulation protein AA HLK66_14870 PF04545 Sigma-70, region 4 HLK66_14870 PF04539 Sigma-70 region 3 HLK66_14870 PF04542 Sigma-70 region 2 HLK66_14875 PF13581 Histidine kinase-like ATPase domain HLK66_14880 PF01740 STAS domain HLK66_14885 PF00768 D-alanyl-D-alanine carboxypeptidase HLK66_14885 PF07943 Penicillin-binding protein 5, C-terminal domain HLK66_14890 PF00557 Metallopeptidase family M24 HLK66_14895 PF08281 Sigma-70, region 4 HLK66_14895 PF04542 Sigma-70 region 2 HLK66_14905 PF02885 Glycosyl transferase family, helical bundle domain HLK66_14905 PF00591 Glycosyl transferase family, a/b domain HLK66_14905 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain HLK66_14910 PF01048 Phosphorylase superfamily HLK66_14915 PF01676 Metalloenzyme superfamily HLK66_14950 PF00589 Phage integrase family HLK66_14950 PF02899 Phage integrase, N-terminal SAM-like domain HLK66_14955 PF14004 Protein of unknown function (DUF4227) HLK66_14960 PF01475 Ferric uptake regulator family HLK66_14965 PF01944 Stage II sporulation protein M HLK66_14980 PF00293 NUDIX domain HLK66_14990 PF00248 Aldo/keto reductase family HLK66_15010 PF00392 Bacterial regulatory proteins, gntR family HLK66_15010 PF00155 Aminotransferase class I and II HLK66_15015 PF00583 Acetyltransferase (GNAT) family HLK66_15020 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HLK66_15025 PF01966 HD domain HLK66_15055 PF07690 Major Facilitator Superfamily HLK66_15065 PF08240 Alcohol dehydrogenase GroES-like domain HLK66_15065 PF00107 Zinc-binding dehydrogenase HLK66_15070 PF13378 Enolase C-terminal domain-like HLK66_15070 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain HLK66_15075 PF07729 FCD domain HLK66_15075 PF00392 Bacterial regulatory proteins, gntR family HLK66_15105 PF00293 NUDIX domain HLK66_15115 PF08281 Sigma-70, region 4 HLK66_15115 PF04542 Sigma-70 region 2 HLK66_15140 PF00294 pfkB family carbohydrate kinase HLK66_15145 PF01381 Helix-turn-helix HLK66_15175 PF02566 OsmC-like protein HLK66_15180 PF12146 Serine aminopeptidase, S33 HLK66_15185 PF07690 Major Facilitator Superfamily HLK66_15205 PF01381 Helix-turn-helix HLK66_15230 PF00672 HAMP domain HLK66_15230 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HLK66_15230 PF02743 Cache domain HLK66_15235 PF01625 Peptide methionine sulfoxide reductase HLK66_15240 PF07690 Major Facilitator Superfamily HLK66_15245 PF01047 MarR family HLK66_15255 PF00106 short chain dehydrogenase HLK66_15265 PF03807 NADP oxidoreductase coenzyme F420-dependent HLK66_15265 PF14748 Pyrroline-5-carboxylate reductase dimerisation HLK66_15270 PF00753 Metallo-beta-lactamase superfamily HLK66_15270 PF12706 Beta-lactamase superfamily domain HLK66_15275 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain HLK66_15275 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain HLK66_15280 PF00149 Calcineurin-like phosphoesterase HLK66_15290 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain HLK66_15290 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HLK66_15295 PF11799 impB/mucB/samB family C-terminal domain HLK66_15295 PF00817 impB/mucB/samB family HLK66_15295 PF11798 IMS family HHH motif HLK66_15305 PF01546 Peptidase family M20/M25/M40 HLK66_15305 PF07687 Peptidase dimerisation domain HLK66_15315 PF03734 L,D-transpeptidase catalytic domain HLK66_15320 PF00005 ABC transporter HLK66_15325 PF00528 Binding-protein-dependent transport system inner membrane component HLK66_15330 PF00497 Bacterial extracellular solute-binding proteins, family 3 HLK66_15335 PF06491 Disulphide isomerase HLK66_15340 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HLK66_15340 PF00364 Biotin-requiring enzyme HLK66_15340 PF02817 e3 binding domain HLK66_15345 PF02780 Transketolase, C-terminal domain HLK66_15345 PF02779 Transketolase, pyrimidine binding domain HLK66_15350 PF00676 Dehydrogenase E1 component HLK66_15355 PF07992 Pyridine nucleotide-disulphide oxidoreductase HLK66_15355 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HLK66_15360 PF00871 Acetokinase family HLK66_15365 PF02954 Bacterial regulatory protein, Fis family HLK66_15365 PF00989 PAS fold HLK66_15365 PF00158 Sigma-54 interaction domain HLK66_15370 PF03009 Glycerophosphoryl diester phosphodiesterase family HLK66_15375 PF00313 'Cold-shock' DNA-binding domain HLK66_15385 PF08769 Sporulation initiation factor Spo0A C terminal HLK66_15385 PF00072 Response regulator receiver domain HLK66_15390 PF01040 UbiA prenyltransferase family HLK66_15395 PF05580 SpoIVB peptidase S55 HLK66_15395 PF17820 PDZ domain HLK66_15400 PF13476 AAA domain HLK66_15405 PF01316 Arginine repressor, DNA binding domain HLK66_15405 PF02863 Arginine repressor, C-terminal domain HLK66_15410 PF01479 S4 domain HLK66_15410 PF01728 FtsJ-like methyltransferase HLK66_15415 PF02780 Transketolase, C-terminal domain HLK66_15415 PF13292 1-deoxy-D-xylulose-5-phosphate synthase HLK66_15415 PF02779 Transketolase, pyrimidine binding domain HLK66_15420 PF00348 Polyprenyl synthetase HLK66_15425 PF02609 Exonuclease VII small subunit HLK66_15430 PF02601 Exonuclease VII, large subunit HLK66_15430 PF13742 OB-fold nucleic acid binding domain HLK66_15435 PF01029 NusB family HLK66_15440 PF03780 Asp23 family, cell envelope-related function HLK66_15445 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HLK66_15445 PF02785 Biotin carboxylase C-terminal domain HLK66_15445 PF00289 Biotin carboxylase, N-terminal domain HLK66_15450 PF00364 Biotin-requiring enzyme HLK66_15455 PF12685 SpoIIIAH-like protein HLK66_15465 PF09581 Stage III sporulation protein AF (Spore_III_AF) HLK66_15470 PF09546 Stage III sporulation protein AE (spore_III_AE) HLK66_15475 PF06686 Stage III sporulation protein AC/AD protein family HLK66_15480 PF06686 Stage III sporulation protein AC/AD protein family HLK66_15485 PF09548 Stage III sporulation protein AB (spore_III_AB) HLK66_15500 PF00245 Alkaline phosphatase HLK66_15505 PF01551 Peptidase family M23 HLK66_15505 PF08460 Bacterial SH3 domain HLK66_15510 PF00232 Glycosyl hydrolase family 1 HLK66_15515 PF01055 Glycosyl hydrolases family 31 HLK66_15515 PF13802 Galactose mutarotase-like HLK66_15520 PF00480 ROK family HLK66_15530 PF00528 Binding-protein-dependent transport system inner membrane component HLK66_15535 PF00528 Binding-protein-dependent transport system inner membrane component HLK66_15550 PF12833 Helix-turn-helix domain HLK66_15550 PF00072 Response regulator receiver domain HLK66_15555 PF06580 Histidine kinase HLK66_15555 PF02743 Cache domain HLK66_15555 PF00672 HAMP domain HLK66_15555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HLK66_15575 PF08207 Elongation factor P (EF-P) KOW-like domain HLK66_15575 PF09285 Elongation factor P, C-terminal HLK66_15575 PF01132 Elongation factor P (EF-P) OB domain HLK66_15580 PF01321 Creatinase/Prolidase N-terminal domain HLK66_15580 PF00557 Metallopeptidase family M24 HLK66_15585 PF11085 Conserved membrane protein YqhR HLK66_15590 PF07136 Protein of unknown function (DUF1385) HLK66_15600 PF01734 Patatin-like phospholipase HLK66_15625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HLK66_15625 PF00512 His Kinase A (phospho-acceptor) domain HLK66_15630 PF00486 Transcriptional regulatory protein, C terminal HLK66_15630 PF00072 Response regulator receiver domain HLK66_15635 PF02867 Ribonucleotide reductase, barrel domain HLK66_15635 PF00317 Ribonucleotide reductase, all-alpha domain HLK66_15635 PF03477 ATP cone domain HLK66_15640 PF03099 Biotin/lipoate A/B protein ligase family HLK66_15645 PF00581 Rhodanese-like domain HLK66_15650 PF02347 Glycine cleavage system P-protein HLK66_15655 PF02347 Glycine cleavage system P-protein HLK66_15660 PF08669 Glycine cleavage T-protein C-terminal barrel domain HLK66_15660 PF01571 Aminomethyltransferase folate-binding domain HLK66_15665 PF00176 SNF2 family N-terminal domain HLK66_15665 PF00271 Helicase conserved C-terminal domain HLK66_15670 PF11079 Bacterial protein YqhG of unknown function HLK66_15675 PF14038 YqzE-like protein HLK66_15700 PF07963 Prokaryotic N-terminal methylation motif HLK66_15705 PF00482 Type II secretion system (T2SS), protein F HLK66_15755 PF08863 YolD-like protein HLK66_15780 PF13457 GW (Gly-Tryp) dipeptide domain HLK66_15780 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase HLK66_15885 PF03354 Phage Terminase HLK66_15965 PF05866 Endodeoxyribonuclease RusA HLK66_15985 PF01695 IstB-like ATP binding protein HLK66_16055 PF00717 Peptidase S24-like HLK66_16055 PF01726 LexA DNA binding domain HLK66_16060 PF02796 Helix-turn-helix domain of resolvase HLK66_16060 PF00239 Resolvase, N terminal domain HLK66_16110 PF08863 YolD-like protein HLK66_16135 PF13457 GW (Gly-Tryp) dipeptide domain HLK66_16135 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase HLK66_16320 PF05866 Endodeoxyribonuclease RusA HLK66_16340 PF01695 IstB-like ATP binding protein HLK66_16415 PF01726 LexA DNA binding domain HLK66_16415 PF00717 Peptidase S24-like HLK66_16420 PF00239 Resolvase, N terminal domain HLK66_16420 PF02796 Helix-turn-helix domain of resolvase HLK66_16435 PF16916 Dimerisation domain of Zinc Transporter HLK66_16435 PF01545 Cation efflux family HLK66_16455 PF00753 Metallo-beta-lactamase superfamily HLK66_16460 PF01910 Thiamine-binding protein HLK66_16470 PF01476 LysM domain HLK66_16470 PF00246 Zinc carboxypeptidase HLK66_16480 PF00480 ROK family HLK66_16505 PF05163 DinB family HLK66_16520 PF01812 5-formyltetrahydrofolate cyclo-ligase family HLK66_16525 PF00471 Ribosomal protein L33 HLK66_16535 PF13439 Glycosyltransferase Family 4 HLK66_16535 PF00534 Glycosyl transferases group 1 HLK66_16555 PF01895 PhoU domain HLK66_16560 PF00005 ABC transporter HLK66_16565 PF00528 Binding-protein-dependent transport system inner membrane component HLK66_16570 PF00528 Binding-protein-dependent transport system inner membrane component HLK66_16575 PF12849 PBP superfamily domain HLK66_16590 PF07690 Major Facilitator Superfamily HLK66_16595 PF02777 Iron/manganese superoxide dismutases, C-terminal domain HLK66_16595 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain HLK66_16600 PF00027 Cyclic nucleotide-binding domain HLK66_16600 PF00325 Bacterial regulatory proteins, crp family HLK66_16605 PF04306 Protein of unknown function (DUF456) HLK66_16610 PF06691 Protein of unknown function (DUF1189) HLK66_16615 PF00672 HAMP domain HLK66_16615 PF02743 Cache domain HLK66_16615 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HLK66_16625 PF04551 GcpE protein HLK66_16640 PF01475 Ferric uptake regulator family HLK66_16650 PF01261 Xylose isomerase-like TIM barrel HLK66_16655 PF00270 DEAD/DEAH box helicase HLK66_16655 PF00271 Helicase conserved C-terminal domain HLK66_16665 PF02401 LytB protein HLK66_16670 PF01784 NIF3 (NGG1p interacting factor 3) HLK66_16675 PF04816 tRNA (adenine(22)-N(1))-methyltransferase HLK66_16685 PF00140 Sigma-70 factor, region 1.2 HLK66_16685 PF04542 Sigma-70 region 2 HLK66_16685 PF04539 Sigma-70 region 3 HLK66_16685 PF04545 Sigma-70, region 4 HLK66_16685 PF03979 Sigma-70 factor, region 1.1 HLK66_16695 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 HLK66_16700 PF03618 Kinase/pyrophosphorylase HLK66_16705 PF08279 HTH domain HLK66_16705 PF00571 CBS domain HLK66_16710 PF02092 Glycyl-tRNA synthetase beta subunit HLK66_16715 PF02091 Glycyl-tRNA synthetase alpha subunit HLK66_16720 PF11967 Recombination protein O N terminal HLK66_16720 PF02565 Recombination protein O C terminal HLK66_16725 PF14006 YqzL-like protein HLK66_16730 PF01926 50S ribosome-binding GTPase HLK66_16730 PF07650 KH domain HLK66_16735 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HLK66_16740 PF01219 Prokaryotic diacylglycerol kinase HLK66_16745 PF02130 Uncharacterized protein family UPF0054 HLK66_16750 PF07698 7TM receptor with intracellular HD hydrolase HLK66_16750 PF01966 HD domain HLK66_16750 PF07697 7TM-HD extracellular HLK66_16755 PF02562 PhoH-like protein HLK66_16760 PF06898 Putative stage IV sporulation protein YqfD HLK66_16765 PF07873 YabP family HLK66_16775 PF12127 SigmaW regulon antibacterial HLK66_16780 PF01972 Serine dehydrogenase proteinase HLK66_16780 PF01957 NfeD-like C-terminal, partner-binding HLK66_16785 PF09424 Yqey-like protein HLK66_16790 PF01165 Ribosomal protein S21 HLK66_16795 PF02690 Na+/Pi-cotransporter HLK66_16810 PF00005 ABC transporter HLK66_16810 PF00664 ABC transporter transmembrane region HLK66_16815 PF00664 ABC transporter transmembrane region HLK66_16815 PF00005 ABC transporter HLK66_16820 PF12833 Helix-turn-helix domain HLK66_16820 PF02311 AraC-like ligand binding domain HLK66_16825 PF01791 DeoC/LacD family aldolase HLK66_16830 PF01938 TRAM domain HLK66_16830 PF04055 Radical SAM superfamily HLK66_16830 PF00919 Uncharacterized protein family UPF0004 HLK66_16835 PF04452 RNA methyltransferase HLK66_16845 PF00226 DnaJ domain HLK66_16845 PF01556 DnaJ C terminal domain HLK66_16845 PF00684 DnaJ central domain HLK66_16850 PF00012 Hsp70 protein HLK66_16855 PF01025 GrpE HLK66_16860 PF01628 HrcA protein C terminal domain HLK66_16865 PF04055 Radical SAM superfamily HLK66_16865 PF06969 HemN C-terminal domain HLK66_16870 PF00679 Elongation factor G C-terminus HLK66_16870 PF00009 Elongation factor Tu GTP binding domain HLK66_16870 PF03144 Elongation factor Tu domain 2 HLK66_16870 PF06421 GTP-binding protein LepA C-terminus HLK66_16875 PF12438 Protein of unknown function (DUF3679) HLK66_16880 PF03418 Germination protease HLK66_16885 PF01649 Ribosomal protein S20 HLK66_16890 PF06144 DNA polymerase III, delta subunit HLK66_16895 PF03772 Competence protein HLK66_16895 PF13567 Domain of unknown function (DUF4131) HLK66_16895 PF00753 Metallo-beta-lactamase superfamily HLK66_16900 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HLK66_16905 PF10531 SLBB domain HLK66_16910 PF14748 Pyrroline-5-carboxylate reductase dimerisation HLK66_16910 PF03807 NADP oxidoreductase coenzyme F420-dependent HLK66_16915 PF13649 Methyltransferase domain HLK66_16925 PF01966 HD domain HLK66_16930 PF01467 Cytidylyltransferase-like HLK66_16935 PF01985 CRS1 / YhbY (CRM) domain HLK66_16940 PF18317 Shikimate 5'-dehydrogenase C-terminal domain HLK66_16940 PF01488 Shikimate / quinate 5-dehydrogenase HLK66_16940 PF08501 Shikimate dehydrogenase substrate binding domain HLK66_16945 PF01926 50S ribosome-binding GTPase HLK66_16955 PF08970 Sporulation inhibitor A HLK66_16960 PF02666 Phosphatidylserine decarboxylase HLK66_16965 PF01066 CDP-alcohol phosphatidyltransferase HLK66_16980 PF05036 Sporulation related domain HLK66_16980 PF01520 N-acetylmuramoyl-L-alanine amidase HLK66_17000 PF13408 Recombinase zinc beta ribbon domain HLK66_17000 PF00239 Resolvase, N terminal domain HLK66_17000 PF07508 Recombinase HLK66_17045 PF12833 Helix-turn-helix domain HLK66_17045 PF02311 AraC-like ligand binding domain HLK66_17050 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HLK66_17050 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HLK66_17060 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HLK66_17060 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HLK66_17070 PF07739 TipAS antibiotic-recognition domain HLK66_17070 PF13411 MerR HTH family regulatory protein HLK66_17090 PF09501 Probable sporulation protein (Bac_small_yrzI) HLK66_17100 PF06874 Firmicute fructose-1,6-bisphosphatase HLK66_17105 PF04545 Sigma-70, region 4 HLK66_17105 PF04542 Sigma-70 region 2 HLK66_17115 PF00665 Integrase core domain HLK66_17115 PF13333 Integrase core domain HLK66_17115 PF13276 HTH-like domain HLK66_17130 PF01053 Cys/Met metabolism PLP-dependent enzyme HLK66_17135 PF00291 Pyridoxal-phosphate dependent enzyme HLK66_17140 PF01048 Phosphorylase superfamily HLK66_17145 PF13649 Methyltransferase domain HLK66_17150 PF10750 Protein of unknown function (DUF2536) HLK66_17160 PF13333 Integrase core domain HLK66_17160 PF00665 Integrase core domain HLK66_17160 PF13276 HTH-like domain HLK66_17165 PF07423 Domain of unknown function (DUF1510) HLK66_17170 PF03717 Penicillin-binding Protein dimerisation domain HLK66_17170 PF00905 Penicillin binding protein transpeptidase domain HLK66_17175 PF01272 Transcription elongation factor, GreA/GreB, C-term HLK66_17175 PF03449 Transcription elongation factor, N-terminal HLK66_17180 PF00485 Phosphoribulokinase / Uridine kinase family HLK66_17195 PF01596 O-methyltransferase HLK66_17200 PF02618 YceG-like family HLK66_17205 PF06949 Protein of unknown function (DUF1292) HLK66_17210 PF03652 Holliday junction resolvase HLK66_17215 PF06135 IreB regulatory phosphoprotein HLK66_17220 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HLK66_17220 PF01411 tRNA synthetases class II (A) HLK66_17220 PF02272 DHHA1 domain HLK66_17225 PF01594 AI-2E family transporter HLK66_17240 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain HLK66_17240 PF13538 UvrD-like helicase C-terminal domain HLK66_17240 PF14490 Helix-hairpin-helix containing domain HLK66_17255 PF00266 Aminotransferase class-V HLK66_17260 PF02082 Transcriptional regulator HLK66_17270 PF07687 Peptidase dimerisation domain HLK66_17270 PF01546 Peptidase family M20/M25/M40 HLK66_17280 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain HLK66_17280 PF13378 Enolase C-terminal domain-like HLK66_17285 PF00072 Response regulator receiver domain HLK66_17285 PF12833 Helix-turn-helix domain HLK66_17295 PF00528 Binding-protein-dependent transport system inner membrane component HLK66_17300 PF00528 Binding-protein-dependent transport system inner membrane component HLK66_17305 PF01547 Bacterial extracellular solute-binding protein HLK66_17310 PF16193 AAA C-terminal domain HLK66_17310 PF05496 Holliday junction DNA helicase RuvB P-loop domain HLK66_17310 PF12002 MgsA AAA+ ATPase C terminal HLK66_17315 PF12679 ABC-2 family transporter protein HLK66_17320 PF00005 ABC transporter HLK66_17325 PF00005 ABC transporter HLK66_17330 PF00392 Bacterial regulatory proteins, gntR family HLK66_17340 PF00899 ThiF family HLK66_17345 PF02938 GAD domain HLK66_17345 PF00152 tRNA synthetases class II (D, K and N) HLK66_17345 PF01336 OB-fold nucleic acid binding domain HLK66_17350 PF13393 Histidyl-tRNA synthetase HLK66_17350 PF03129 Anticodon binding domain HLK66_17360 PF01520 N-acetylmuramoyl-L-alanine amidase HLK66_17360 PF08239 Bacterial SH3 domain HLK66_17365 PF02580 D-Tyr-tRNA(Tyr) deacylase HLK66_17370 PF04607 Region found in RelA / SpoT proteins HLK66_17370 PF02824 TGS domain HLK66_17370 PF13291 ACT domain HLK66_17375 PF00156 Phosphoribosyl transferase domain HLK66_17380 PF10141 Single-strand DNA-specific exonuclease, C terminal domain HLK66_17380 PF17768 RecJ OB domain HLK66_17380 PF02272 DHHA1 domain HLK66_17380 PF01368 DHH family HLK66_17385 PF06305 Lipopolysaccharide assembly protein A domain HLK66_17390 PF02355 Protein export membrane protein HLK66_17390 PF07549 SecD/SecF GG Motif HLK66_17395 PF13797 Post-transcriptional regulator HLK66_17400 PF01943 Polysaccharide biosynthesis protein HLK66_17400 PF14667 Polysaccharide biosynthesis C-terminal domain HLK66_17405 PF04239 Protein of unknown function (DUF421) HLK66_17410 PF12670 Protein of unknown function (DUF3792) HLK66_17415 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) HLK66_17420 PF02699 Preprotein translocase subunit HLK66_17425 PF01702 Queuine tRNA-ribosyltransferase HLK66_17430 PF02547 Queuosine biosynthesis protein HLK66_17435 PF11146 Protein of unknown function (DUF2905) HLK66_17440 PF05496 Holliday junction DNA helicase RuvB P-loop domain HLK66_17440 PF05491 RuvB C-terminal winged helix domain HLK66_17440 PF17864 RuvB AAA lid domain HLK66_17445 PF01330 RuvA N terminal domain HLK66_17445 PF07499 RuvA, C-terminal domain HLK66_17450 PF08955 BofC C-terminal domain HLK66_17450 PF08977 Bypass of Forespore C, N terminal HLK66_17460 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) HLK66_17475 PF08279 HTH domain HLK66_17475 PF02829 3H domain HLK66_17480 PF01842 ACT domain HLK66_17480 PF00800 Prephenate dehydratase HLK66_17485 PF01842 ACT domain HLK66_17490 PF01926 50S ribosome-binding GTPase HLK66_17490 PF09269 Domain of unknown function (DUF1967) HLK66_17490 PF01018 GTP1/OBG HLK66_17495 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain HLK66_17495 PF14682 Sporulation initiation phospho-transferase B, C-terminal HLK66_17500 PF01016 Ribosomal L27 protein HLK66_17505 PF04327 Cysteine protease Prp HLK66_17510 PF00829 Ribosomal prokaryotic L21 protein HLK66_17515 PF00575 S1 RNA binding domain HLK66_17515 PF10150 Ribonuclease E/G family HLK66_17520 PF02163 Peptidase family M50 HLK66_17525 PF01551 Peptidase family M23 HLK66_17530 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain HLK66_17535 PF03775 Septum formation inhibitor MinC, C-terminal domain HLK66_17540 PF04093 rod shape-determining protein MreD HLK66_17545 PF04085 rod shape-determining protein MreC HLK66_17555 PF04002 RadC-like JAB domain HLK66_17560 PF02545 Maf-like protein HLK66_17590 PF06750 Bacterial Peptidase A24 N-terminal domain HLK66_17590 PF01478 Type IV leader peptidase family HLK66_17595 PF00114 Pilin (bacterial filament) HLK66_17595 PF07963 Prokaryotic N-terminal methylation motif HLK66_17600 PF00482 Type II secretion system (T2SS), protein F HLK66_17605 PF00437 Type II/IV secretion system protein HLK66_17610 PF00437 Type II/IV secretion system protein HLK66_17650 PF07694 5TMR of 5TMR-LYT HLK66_17650 PF00990 Diguanylate cyclase, GGDEF domain HLK66_17660 PF10458 Valyl tRNA synthetase tRNA binding arm HLK66_17660 PF00133 tRNA synthetases class I (I, L, M and V) HLK66_17660 PF08264 Anticodon-binding domain of tRNA HLK66_17670 PF01476 LysM domain HLK66_17670 PF01476 LysM domain HLK66_17675 PF14883 Hypothetical glycosyl hydrolase family 13 HLK66_17675 PF01522 Polysaccharide deacetylase HLK66_17685 PF00528 Binding-protein-dependent transport system inner membrane component HLK66_17690 PF08402 TOBE domain HLK66_17690 PF00005 ABC transporter HLK66_17695 PF00202 Aminotransferase class-III HLK66_17700 PF00490 Delta-aminolevulinic acid dehydratase HLK66_17710 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain HLK66_17710 PF03900 Porphobilinogen deaminase, C-terminal domain HLK66_17715 PF01578 Cytochrome C assembly protein HLK66_17720 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain HLK66_17720 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain HLK66_17720 PF01488 Shikimate / quinate 5-dehydrogenase HLK66_17730 PF01926 50S ribosome-binding GTPase HLK66_17735 PF00004 ATPase family associated with various cellular activities (AAA) HLK66_17735 PF05362 Lon protease (S16) C-terminal proteolytic domain HLK66_17735 PF02190 ATP-dependent protease La (LON) substrate-binding domain HLK66_17740 PF00004 ATPase family associated with various cellular activities (AAA) HLK66_17740 PF05362 Lon protease (S16) C-terminal proteolytic domain HLK66_17745 PF10431 C-terminal, D2-small domain, of ClpB protein HLK66_17745 PF07724 AAA domain (Cdc48 subfamily) HLK66_17745 PF06689 ClpX C4-type zinc finger HLK66_17750 PF05698 Bacterial trigger factor protein (TF) C-terminus HLK66_17750 PF05697 Bacterial trigger factor protein (TF) HLK66_17750 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HLK66_17760 PF00694 Aconitase C-terminal domain HLK66_17765 PF00330 Aconitase family (aconitate hydratase) HLK66_17770 PF00180 Isocitrate/isopropylmalate dehydrogenase HLK66_17775 PF00682 HMGL-like HLK66_17775 PF08502 LeuA allosteric (dimerisation) domain HLK66_17780 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain HLK66_17780 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain HLK66_17785 PF01842 ACT domain HLK66_17785 PF10369 Small subunit of acetolactate synthase HLK66_17790 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HLK66_17790 PF00205 Thiamine pyrophosphate enzyme, central domain HLK66_17790 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HLK66_17800 PF11181 Heat induced stress protein YflT HLK66_17800 PF09557 Domain of unknown function (DUF2382) HLK66_17815 PF12850 Calcineurin-like phosphoesterase superfamily domain HLK66_17820 PF01725 Ham1 family HLK66_17830 PF10646 Sporulation and spore germination HLK66_17835 PF01177 Asp/Glu/Hydantoin racemase HLK66_17840 PF01047 MarR family HLK66_17845 PF00196 Bacterial regulatory proteins, luxR family HLK66_17855 PF13183 4Fe-4S dicluster domain HLK66_17855 PF13085 2Fe-2S iron-sulfur cluster binding domain HLK66_17860 PF02910 Fumarate reductase flavoprotein C-term HLK66_17860 PF00890 FAD binding domain HLK66_17865 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit HLK66_17870 PF10702 Protein of unknown function (DUF2507) HLK66_17875 PF00696 Amino acid kinase family HLK66_17875 PF13840 ACT domain HLK66_17880 PF08459 UvrC Helix-hairpin-helix N-terminal HLK66_17880 PF01541 GIY-YIG catalytic domain HLK66_17880 PF02151 UvrB/uvrC motif HLK66_17885 PF00085 Thioredoxin HLK66_17890 PF01012 Electron transfer flavoprotein domain HLK66_17890 PF00766 Electron transfer flavoprotein FAD-binding domain HLK66_17895 PF01012 Electron transfer flavoprotein domain HLK66_17900 PF13193 AMP-binding enzyme C-terminal domain HLK66_17900 PF00501 AMP-binding enzyme HLK66_17905 PF03994 Domain of Unknown Function (DUF350) HLK66_17910 PF00488 MutS domain V HLK66_17910 PF01713 Smr domain HLK66_17915 PF14716 Helix-hairpin-helix domain HLK66_17915 PF02811 PHP domain HLK66_17915 PF14791 DNA polymerase beta thumb HLK66_17925 PF05164 Cell division protein ZapA HLK66_17930 PF00480 ROK family HLK66_17935 PF00356 Bacterial regulatory proteins, lacI family HLK66_17940 PF00528 Binding-protein-dependent transport system inner membrane component HLK66_17945 PF00528 Binding-protein-dependent transport system inner membrane component HLK66_17955 PF03484 tRNA synthetase B5 domain HLK66_17955 PF03147 Ferredoxin-fold anticodon binding domain HLK66_17955 PF03483 B3/4 domain HLK66_17955 PF01588 Putative tRNA binding domain HLK66_17955 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain HLK66_17960 PF01409 tRNA synthetases class II core domain (F) HLK66_17960 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain HLK66_17965 PF08032 RNA 2'-O ribose methyltransferase substrate binding HLK66_17965 PF00588 SpoU rRNA Methylase family HLK66_17970 PF14098 Small, acid-soluble spore protein I HLK66_17975 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HLK66_17975 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HLK66_17980 PF01261 Xylose isomerase-like TIM barrel HLK66_17985 PF00480 ROK family HLK66_17990 PF01594 AI-2E family transporter HLK66_17995 PF05343 M42 glutamyl aminopeptidase HLK66_18010 PF06961 Protein of unknown function (DUF1294) HLK66_18015 PF00453 Ribosomal protein L20 HLK66_18020 PF01632 Ribosomal protein L35 HLK66_18025 PF00707 Translation initiation factor IF-3, C-terminal domain HLK66_18025 PF05198 Translation initiation factor IF-3, N-terminal domain HLK66_18030 PF02824 TGS domain HLK66_18030 PF03129 Anticodon binding domain HLK66_18030 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HLK66_18030 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HLK66_18035 PF08812 YtxC-like family HLK66_18050 PF07319 Primosomal protein DnaI N-terminus HLK66_18050 PF01695 IstB-like ATP binding protein HLK66_18055 PF07261 Replication initiation and membrane attachment HLK66_18060 PF03477 ATP cone domain HLK66_18065 PF01121 Dephospho-CoA kinase HLK66_18070 PF02659 Putative manganese efflux pump HLK66_18075 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain HLK66_18075 PF06827 Zinc finger found in FPG and IleRS HLK66_18075 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain HLK66_18080 PF01367 5'-3' exonuclease, C-terminal SAM fold HLK66_18080 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain HLK66_18080 PF00476 DNA polymerase family A HLK66_18085 PF00989 PAS fold HLK66_18085 PF00512 His Kinase A (phospho-acceptor) domain HLK66_18085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HLK66_18085 PF16736 Single Cache-like HLK66_18090 PF00486 Transcriptional regulatory protein, C terminal HLK66_18090 PF00072 Response regulator receiver domain HLK66_18095 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain HLK66_18095 PF00056 lactate/malate dehydrogenase, NAD binding domain HLK66_18100 PF00180 Isocitrate/isopropylmalate dehydrogenase HLK66_18105 PF00285 Citrate synthase, C-terminal domain HLK66_18110 PF04284 Protein of unknown function (DUF441) HLK66_18115 PF01594 AI-2E family transporter HLK66_18130 PF02441 Flavoprotein HLK66_18135 PF04055 Radical SAM superfamily HLK66_18135 PF06463 Molybdenum Cofactor Synthesis C HLK66_18145 PF01695 IstB-like ATP binding protein HLK66_18155 PF00480 ROK family HLK66_18160 PF01270 Glycosyl hydrolases family 8 HLK66_18165 PF00106 short chain dehydrogenase HLK66_18180 PF00528 Binding-protein-dependent transport system inner membrane component HLK66_18185 PF00528 Binding-protein-dependent transport system inner membrane component HLK66_18190 PF01784 NIF3 (NGG1p interacting factor 3) HLK66_18195 PF04854 Protein of unknown function, DUF624 HLK66_18200 PF00528 Binding-protein-dependent transport system inner membrane component HLK66_18205 PF00528 Binding-protein-dependent transport system inner membrane component HLK66_18210 PF01547 Bacterial extracellular solute-binding protein HLK66_18215 PF12833 Helix-turn-helix domain HLK66_18215 PF17853 GGDEF-like domain HLK66_18220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HLK66_18220 PF00672 HAMP domain HLK66_18220 PF02743 Cache domain HLK66_18220 PF06580 Histidine kinase HLK66_18225 PF04186 FxsA cytoplasmic membrane protein HLK66_18230 PF02887 Pyruvate kinase, alpha/beta domain HLK66_18230 PF00224 Pyruvate kinase, barrel domain HLK66_18230 PF00391 PEP-utilising enzyme, mobile domain HLK66_18235 PF00365 Phosphofructokinase HLK66_18240 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit HLK66_18245 PF17848 Acetyl-coA carboxylase zinc finger domain HLK66_18245 PF01039 Carboxyl transferase domain HLK66_18250 PF00392 Bacterial regulatory proteins, gntR family HLK66_18250 PF07729 FCD domain HLK66_18255 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HLK66_18255 PF07733 Bacterial DNA polymerase III alpha NTPase domain HLK66_18255 PF02811 PHP domain HLK66_18255 PF01336 OB-fold nucleic acid binding domain HLK66_18255 PF14579 Helix-hairpin-helix motif HLK66_18260 PF14034 Sporulation protein YtrH HLK66_18270 PF01368 DHH family HLK66_18270 PF02272 DHHA1 domain HLK66_18275 PF00392 Bacterial regulatory proteins, gntR family HLK66_18275 PF07085 DRTGG domain HLK66_18275 PF00571 CBS domain HLK66_18275 PF03061 Thioesterase superfamily HLK66_18285 PF01321 Creatinase/Prolidase N-terminal domain HLK66_18285 PF00557 Metallopeptidase family M24 HLK66_18300 PF00582 Universal stress protein family HLK66_18305 PF00206 Lyase HLK66_18305 PF14698 Argininosuccinate lyase C-terminal HLK66_18310 PF00764 Arginosuccinate synthase HLK66_18315 PF00994 Probable molybdopterin binding domain HLK66_18320 PF13538 UvrD-like helicase C-terminal domain HLK66_18330 PF00871 Acetokinase family HLK66_18335 PF02384 N-6 DNA Methylase HLK66_18340 PF08534 Redoxin HLK66_18345 PF09579 Sporulation protein YtfJ (Spore_YtfJ) HLK66_18350 PF11167 Protein of unknown function (DUF2953) HLK66_18355 PF06271 RDD family HLK66_18360 PF01343 Peptidase family S49 HLK66_18365 PF00892 EamA-like transporter family HLK66_18370 PF07969 Amidohydrolase family HLK66_18375 PF13193 AMP-binding enzyme C-terminal domain HLK66_18375 PF00501 AMP-binding enzyme HLK66_18380 PF00269 Small, acid-soluble spore proteins, alpha/beta type HLK66_18385 PF02926 THUMP domain HLK66_18385 PF02568 Thiamine biosynthesis protein (ThiI) HLK66_18390 PF00266 Aminotransferase class-V HLK66_18395 PF06160 Septation ring formation regulator, EzrA HLK66_18400 PF02811 PHP domain HLK66_18405 PF00440 Bacterial regulatory proteins, tetR family HLK66_18410 PF13185 GAF domain HLK66_18415 PF00990 Diguanylate cyclase, GGDEF domain HLK66_18420 PF01479 S4 domain HLK66_18420 PF00163 Ribosomal protein S4/S9 N-terminal domain HLK66_18430 PF01479 S4 domain HLK66_18430 PF00579 tRNA synthetases class I (W and Y) HLK66_18435 PF00912 Transglycosylase HLK66_18435 PF00905 Penicillin binding protein transpeptidase domain HLK66_18440 PF00356 Bacterial regulatory proteins, lacI family HLK66_18445 PF00793 DAHP synthetase I family HLK66_18445 PF01817 Chorismate mutase type II HLK66_18450 PF02491 SHS2 domain inserted in FTSA HLK66_18455 PF11009 Protein of unknown function (DUF2847) HLK66_18460 PF12732 YtxH-like protein HLK66_18465 PF06103 Bacterial protein of unknown function (DUF948) HLK66_18470 PF02073 Thermophilic metalloprotease (M29) HLK66_18475 PF02875 Mur ligase family, glutamate ligase domain HLK66_18475 PF01225 Mur ligase family, catalytic domain HLK66_18475 PF08245 Mur ligase middle domain HLK66_18480 PF09397 Ftsk gamma domain HLK66_18480 PF01580 FtsK/SpoIIIE family HLK66_18480 PF17854 FtsK alpha domain HLK66_18485 PF07285 Protein of unknown function (DUF1444) HLK66_18490 PF00085 Thioredoxin HLK66_18495 PF01931 Protein of unknown function DUF84 HLK66_18510 PF05343 M42 glutamyl aminopeptidase HLK66_18515 PF03413 Peptidase propeptide and YPEB domain HLK66_18520 PF02390 Putative methyltransferase HLK66_18525 PF14165 YtzH-like protein HLK66_18530 PF01636 Phosphotransferase enzyme family HLK66_18535 PF00128 Alpha amylase, catalytic domain HLK66_18535 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) HLK66_18535 PF17999 Pullulanase N1-terminal domain HLK66_18550 PF01063 Amino-transferase class IV HLK66_18555 PF01546 Peptidase family M20/M25/M40 HLK66_18560 PF00293 NUDIX domain HLK66_18560 PF09297 NADH pyrophosphatase zinc ribbon domain HLK66_18565 PF08220 DeoR-like helix-turn-helix domain HLK66_18570 PF00849 RNA pseudouridylate synthase HLK66_18570 PF01479 S4 domain HLK66_18575 PF01943 Polysaccharide biosynthesis protein HLK66_18575 PF14667 Polysaccharide biosynthesis C-terminal domain HLK66_18585 PF10957 Sporulation protein Cse60 HLK66_18590 PF00581 Rhodanese-like domain HLK66_18595 PF08264 Anticodon-binding domain of tRNA HLK66_18595 PF00133 tRNA synthetases class I (I, L, M and V) HLK66_18595 PF13603 Leucyl-tRNA synthetase, Domain 2 HLK66_18595 PF09334 tRNA synthetases class I (M) HLK66_18605 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase HLK66_18610 PF01425 Amidase HLK66_18615 PF00300 Histidine phosphatase superfamily (branch 1) HLK66_18620 PF07690 Major Facilitator Superfamily HLK66_18630 PF10732 Protein of unknown function (DUF2524) HLK66_18635 PF04055 Radical SAM superfamily HLK66_18635 PF16199 Radical_SAM C-terminal domain HLK66_18640 PF06962 Putative rRNA methylase HLK66_18650 PF12146 Serine aminopeptidase, S33 HLK66_18655 PF13529 Peptidase_C39 like family HLK66_18660 PF00733 Asparagine synthase HLK66_18660 PF13537 Glutamine amidotransferase domain HLK66_18665 PF00438 S-adenosylmethionine synthetase, N-terminal domain HLK66_18665 PF02772 S-adenosylmethionine synthetase, central domain HLK66_18665 PF02773 S-adenosylmethionine synthetase, C-terminal domain HLK66_18670 PF10763 Protein of unknown function (DUF2584) HLK66_18675 PF00326 Prolyl oligopeptidase family HLK66_18680 PF00293 NUDIX domain HLK66_18690 PF01925 Sulfite exporter TauE/SafE HLK66_18695 PF13396 Phospholipase_D-nuclease N-terminal HLK66_18695 PF13091 PLD-like domain HLK66_18700 PF02664 S-Ribosylhomocysteinase (LuxS) HLK66_18705 PF01809 Putative membrane protein insertion efficiency factor HLK66_18710 PF00484 Carbonic anhydrase HLK66_18715 PF07561 Domain of Unknown Function (DUF1540) HLK66_18725 PF13193 AMP-binding enzyme C-terminal domain HLK66_18725 PF00501 AMP-binding enzyme HLK66_18730 PF00378 Enoyl-CoA hydratase/isomerase HLK66_18735 PF00561 alpha/beta hydrolase fold HLK66_18740 PF16582 Middle domain of thiamine pyrophosphate HLK66_18740 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HLK66_18740 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HLK66_18745 PF00425 chorismate binding enzyme HLK66_18750 PF01258 Prokaryotic dksA/traR C4-type zinc finger HLK66_18755 PF00343 Carbohydrate phosphorylase HLK66_18760 PF08323 Starch synthase catalytic domain HLK66_18760 PF00534 Glycosyl transferases group 1 HLK66_18765 PF00483 Nucleotidyl transferase HLK66_18770 PF00483 Nucleotidyl transferase HLK66_18775 PF00128 Alpha amylase, catalytic domain HLK66_18775 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) HLK66_18775 PF02806 Alpha amylase, C-terminal all-beta domain HLK66_18900 PF02308 MgtC family HLK66_18910 PF16653 Saccharopine dehydrogenase C-terminal domain HLK66_18910 PF03435 Saccharopine dehydrogenase NADP binding domain HLK66_18915 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain HLK66_18920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HLK66_18920 PF13426 PAS domain HLK66_18920 PF00512 His Kinase A (phospho-acceptor) domain HLK66_18920 PF00989 PAS fold HLK66_18920 PF13188 PAS domain HLK66_18935 PF08240 Alcohol dehydrogenase GroES-like domain HLK66_18935 PF00107 Zinc-binding dehydrogenase HLK66_18945 PF00881 Nitroreductase family HLK66_18955 PF10685 Stress-induced bacterial acidophilic repeat motif HLK66_18955 PF00477 Small hydrophilic plant seed protein HLK66_18960 PF00072 Response regulator receiver domain HLK66_18960 PF01966 HD domain HLK66_18970 PF01979 Amidohydrolase family HLK66_18970 PF13382 Adenine deaminase C-terminal domain HLK66_18975 PF02417 Chromate transporter HLK66_18980 PF02417 Chromate transporter HLK66_18990 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HLK66_18990 PF01872 RibD C-terminal domain HLK66_18995 PF00925 GTP cyclohydrolase II HLK66_18995 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase HLK66_19000 PF00440 Bacterial regulatory proteins, tetR family HLK66_19005 PF07885 Ion channel HLK66_19005 PF02254 TrkA-N domain HLK66_19015 PF00342 Phosphoglucose isomerase HLK66_19020 PF00465 Iron-containing alcohol dehydrogenase HLK66_19025 PF04070 Domain of unknown function (DUF378) HLK66_19030 PF00202 Aminotransferase class-III HLK66_19035 PF00575 S1 RNA binding domain HLK66_19040 PF00155 Aminotransferase class I and II HLK66_19045 PF01037 Lrp/AsnC ligand binding domain HLK66_19055 PF09383 NIL domain HLK66_19055 PF00005 ABC transporter HLK66_19060 PF00528 Binding-protein-dependent transport system inner membrane component HLK66_19065 PF03180 NLPA lipoprotein HLK66_19075 PF01566 Natural resistance-associated macrophage protein HLK66_19080 PF00080 Copper/zinc superoxide dismutase (SODC) HLK66_19090 PF00929 Exonuclease HLK66_19100 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus HLK66_19100 PF00361 Proton-conducting membrane transporter HLK66_19100 PF13244 Domain of unknown function (DUF4040) HLK66_19105 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter HLK66_19110 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L HLK66_19115 PF00361 Proton-conducting membrane transporter HLK66_19120 PF01899 Na+/H+ ion antiporter subunit HLK66_19125 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) HLK66_19130 PF03334 Na+/H+ antiporter subunit HLK66_19150 PF00717 Peptidase S24-like HLK66_19150 PF01726 LexA DNA binding domain HLK66_19190 PF00561 alpha/beta hydrolase fold HLK66_19195 PF02789 Cytosol aminopeptidase family, N-terminal domain HLK66_19195 PF00883 Cytosol aminopeptidase family, catalytic domain HLK66_19200 PF02681 Divergent PAP2 family HLK66_19205 PF06725 3D domain HLK66_19210 PF07992 Pyridine nucleotide-disulphide oxidoreductase HLK66_19215 PF01521 Iron-sulphur cluster biosynthesis HLK66_19225 PF07293 Protein of unknown function (DUF1450) HLK66_19235 PF07315 Protein of unknown function (DUF1462) HLK66_19240 PF01106 NifU-like domain HLK66_19245 PF08544 GHMP kinases C terminal HLK66_19245 PF00288 GHMP kinases N terminal domain HLK66_19250 PF00291 Pyridoxal-phosphate dependent enzyme HLK66_19255 PF03447 Homoserine dehydrogenase, NAD binding domain HLK66_19255 PF00742 Homoserine dehydrogenase HLK66_19255 PF01842 ACT domain HLK66_19265 PF04608 Phosphatidylglycerophosphatase A HLK66_19270 PF13344 Haloacid dehalogenase-like hydrolase HLK66_19275 PF01934 Protein of unknown function DUF86 HLK66_19280 PF00563 EAL domain HLK66_19280 PF08495 FIST N domain HLK66_19280 PF10442 FIST C domain HLK66_19280 PF00990 Diguanylate cyclase, GGDEF domain HLK66_19290 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family HLK66_19290 PF04055 Radical SAM superfamily HLK66_19295 PF01551 Peptidase family M23 HLK66_19300 PF01966 HD domain HLK66_19305 PF08827 Domain of unknown function (DUF1805) HLK66_19310 PF02872 5'-nucleotidase, C-terminal domain HLK66_19315 PF01904 Protein of unknown function DUF72 HLK66_19325 PF04962 KduI/IolB family HLK66_19340 PF09339 IclR helix-turn-helix domain HLK66_19340 PF01614 Bacterial transcriptional regulator HLK66_19350 PF14602 Hexapeptide repeat of succinyl-transferase HLK66_19350 PF12464 Maltose acetyltransferase HLK66_19355 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HLK66_19365 PF00480 ROK family HLK66_19370 PF01458 Uncharacterized protein family (UPF0051) HLK66_19375 PF01592 NifU-like N terminal domain HLK66_19380 PF00266 Aminotransferase class-V HLK66_19385 PF01458 Uncharacterized protein family (UPF0051) HLK66_19390 PF00005 ABC transporter HLK66_19395 PF03180 NLPA lipoprotein HLK66_19400 PF00528 Binding-protein-dependent transport system inner membrane component HLK66_19405 PF00005 ABC transporter HLK66_19405 PF09383 NIL domain HLK66_19415 PF00085 Thioredoxin HLK66_19420 PF01751 Toprim domain HLK66_19425 PF01597 Glycine cleavage H-protein HLK66_19430 PF03960 ArsC family HLK66_19435 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HLK66_19435 PF02770 Acyl-CoA dehydrogenase, middle domain HLK66_19435 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HLK66_19445 PF14115 YuzL-like protein HLK66_19455 PF07875 Coat F domain HLK66_19460 PF10835 Protein of unknown function (DUF2573) HLK66_19465 PF01098 Cell cycle protein HLK66_19470 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HLK66_19470 PF00672 HAMP domain HLK66_19470 PF02743 Cache domain HLK66_19480 PF00005 ABC transporter HLK66_19485 PF00528 Binding-protein-dependent transport system inner membrane component HLK66_19490 PF00497 Bacterial extracellular solute-binding proteins, family 3 HLK66_19500 PF00294 pfkB family carbohydrate kinase HLK66_19505 PF02673 Bacitracin resistance protein BacA HLK66_19510 PF01594 AI-2E family transporter HLK66_19515 PF03176 MMPL family HLK66_19520 PF01047 MarR family HLK66_19525 PF03061 Thioesterase superfamily HLK66_19540 PF16657 Maltogenic Amylase, C-terminal domain HLK66_19540 PF00128 Alpha amylase, catalytic domain HLK66_19545 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family HLK66_19545 PF00356 Bacterial regulatory proteins, lacI family HLK66_19550 PF01638 HxlR-like helix-turn-helix HLK66_19555 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family HLK66_19560 PF01380 SIS domain HLK66_19570 PF04203 Sortase domain HLK66_19575 PF02690 Na+/Pi-cotransporter HLK66_19585 PF12848 ABC transporter HLK66_19585 PF00005 ABC transporter HLK66_19585 PF16326 ABC transporter C-terminal domain HLK66_19595 PF00356 Bacterial regulatory proteins, lacI family HLK66_19600 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HLK66_19600 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HLK66_19605 PF02449 Beta-galactosidase HLK66_19605 PF08533 Beta-galactosidase C-terminal domain HLK66_19605 PF08532 Beta-galactosidase trimerisation domain HLK66_19610 PF07470 Glycosyl Hydrolase Family 88 HLK66_19615 PF00528 Binding-protein-dependent transport system inner membrane component HLK66_19620 PF00528 Binding-protein-dependent transport system inner membrane component HLK66_19625 PF13416 Bacterial extracellular solute-binding protein HLK66_19630 PF00072 Response regulator receiver domain HLK66_19630 PF12833 Helix-turn-helix domain HLK66_19635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HLK66_19635 PF00672 HAMP domain HLK66_19635 PF06580 Histidine kinase HLK66_19635 PF02743 Cache domain HLK66_19640 PF04854 Protein of unknown function, DUF624 HLK66_19650 PF07875 Coat F domain HLK66_19655 PF08678 Rsbr N terminal HLK66_19655 PF01740 STAS domain HLK66_19660 PF02457 DisA bacterial checkpoint controller nucleotide-binding HLK66_19660 PF10372 Bacterial membrane-spanning protein N-terminus HLK66_19670 PF00171 Aldehyde dehydrogenase family HLK66_19675 PF01487 Type I 3-dehydroquinase HLK66_19685 PF00199 Catalase HLK66_19685 PF06628 Catalase-related immune-responsive HLK66_19695 PF00248 Aldo/keto reductase family HLK66_19700 PF00528 Binding-protein-dependent transport system inner membrane component HLK66_19705 PF00528 Binding-protein-dependent transport system inner membrane component HLK66_19710 PF01547 Bacterial extracellular solute-binding protein HLK66_19715 PF02056 Family 4 glycosyl hydrolase HLK66_19715 PF11975 Family 4 glycosyl hydrolase C-terminal domain HLK66_19720 PF12833 Helix-turn-helix domain HLK66_19730 PF00403 Heavy-metal-associated domain HLK66_19735 PF00403 Heavy-metal-associated domain HLK66_19745 PF07729 FCD domain HLK66_19745 PF00392 Bacterial regulatory proteins, gntR family HLK66_19755 PF07690 Major Facilitator Superfamily HLK66_19760 PF07739 TipAS antibiotic-recognition domain HLK66_19760 PF13411 MerR HTH family regulatory protein HLK66_19765 PF00392 Bacterial regulatory proteins, gntR family HLK66_19765 PF07702 UTRA domain HLK66_19770 PF01323 DSBA-like thioredoxin domain HLK66_19780 PF03358 NADPH-dependent FMN reductase HLK66_19785 PF00155 Aminotransferase class I and II HLK66_19785 PF00392 Bacterial regulatory proteins, gntR family HLK66_19815 PF00528 Binding-protein-dependent transport system inner membrane component HLK66_19820 PF00005 ABC transporter HLK66_19825 PF06964 Alpha-L-arabinofuranosidase C-terminal domain HLK66_19835 PF00528 Binding-protein-dependent transport system inner membrane component HLK66_19840 PF00528 Binding-protein-dependent transport system inner membrane component HLK66_19845 PF13416 Bacterial extracellular solute-binding protein HLK66_19850 PF13217 Protein of unknown function (DUF4025) HLK66_19855 PF00171 Aldehyde dehydrogenase family HLK66_19860 PF00596 Class II Aldolase and Adducin N-terminal domain HLK66_19865 PF00107 Zinc-binding dehydrogenase HLK66_19865 PF08240 Alcohol dehydrogenase GroES-like domain HLK66_19870 PF03611 PTS system sugar-specific permease component HLK66_19880 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HLK66_19885 PF08279 HTH domain HLK66_19885 PF00874 PRD domain HLK66_19885 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HLK66_19885 PF05043 Mga helix-turn-helix domain HLK66_19895 PF01668 SmpB protein HLK66_19905 PF12146 Serine aminopeptidase, S33 HLK66_19910 PF03840 Preprotein translocase SecG subunit HLK66_19915 PF03952 Enolase, N-terminal domain HLK66_19915 PF00113 Enolase, C-terminal TIM barrel domain HLK66_19920 PF06415 BPG-independent PGAM N-terminus (iPGM_N) HLK66_19920 PF01676 Metalloenzyme superfamily HLK66_19925 PF00121 Triosephosphate isomerase HLK66_19930 PF00162 Phosphoglycerate kinase HLK66_19935 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HLK66_19935 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HLK66_19940 PF04198 Putative sugar-binding domain HLK66_19955 PF00574 Clp protease HLK66_19960 PF00381 PTS HPr component phosphorylation site HLK66_19965 PF10298 WhiA N-terminal LAGLIDADG-like domain HLK66_19965 PF14527 WhiA LAGLIDADG-like domain HLK66_19965 PF02650 WhiA C-terminal HTH domain HLK66_19970 PF01933 Uncharacterised protein family UPF0052 HLK66_19975 PF03668 P-loop ATPase protein family HLK66_19980 PF00293 NUDIX domain HLK66_19995 PF07992 Pyridine nucleotide-disulphide oxidoreductase HLK66_20010 PF01502 Phosphoribosyl-AMP cyclohydrolase HLK66_20010 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase HLK66_20015 PF00977 Histidine biosynthesis protein HLK66_20020 PF00977 Histidine biosynthesis protein HLK66_20025 PF00117 Glutamine amidotransferase class-I HLK66_20030 PF00475 Imidazoleglycerol-phosphate dehydratase HLK66_20035 PF00815 Histidinol dehydrogenase HLK66_20040 PF01634 ATP phosphoribosyltransferase HLK66_20045 PF13393 Histidyl-tRNA synthetase HLK66_20050 PF14602 Hexapeptide repeat of succinyl-transferase HLK66_20055 PF13419 Haloacid dehalogenase-like hydrolase HLK66_20060 PF01790 Prolipoprotein diacylglyceryl transferase HLK66_20065 PF02603 HPr Serine kinase N terminus HLK66_20065 PF07475 HPr Serine kinase C-terminal domain HLK66_20070 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV HLK66_20075 PF13349 Putative adhesin HLK66_20080 PF17760 UvrA interaction domain HLK66_20080 PF17755 UvrA DNA-binding domain HLK66_20080 PF00005 ABC transporter HLK66_20085 PF00271 Helicase conserved C-terminal domain HLK66_20085 PF04851 Type III restriction enzyme, res subunit HLK66_20085 PF02151 UvrB/uvrC motif HLK66_20085 PF17757 UvrB interaction domain HLK66_20085 PF12344 Ultra-violet resistance protein B HLK66_20090 PF09964 Uncharacterized protein conserved in bacteria (DUF2198) HLK66_20095 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain HLK66_20095 PF01740 STAS domain HLK66_20110 PF00465 Iron-containing alcohol dehydrogenase HLK66_20110 PF00171 Aldehyde dehydrogenase family HLK66_20120 PF03176 MMPL family HLK66_20125 PF04542 Sigma-70 region 2 HLK66_20125 PF08281 Sigma-70, region 4 HLK66_20130 PF13739 Deacetylase PdaC HLK66_20130 PF11738 Protein of unknown function (DUF3298) HLK66_20135 PF01545 Cation efflux family HLK66_20135 PF16916 Dimerisation domain of Zinc Transporter HLK66_20145 PF03129 Anticodon binding domain HLK66_20145 PF09180 Prolyl-tRNA synthetase, C-terminal HLK66_20145 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HLK66_20150 PF00266 Aminotransferase class-V HLK66_20155 PF01546 Peptidase family M20/M25/M40 HLK66_20160 PF17853 GGDEF-like domain HLK66_20160 PF07905 Purine catabolism regulatory protein-like family HLK66_20160 PF13556 PucR C-terminal helix-turn-helix domain HLK66_20165 PF00860 Permease family HLK66_20170 PF00390 Malic enzyme, N-terminal domain HLK66_20170 PF03949 Malic enzyme, NAD binding domain HLK66_20175 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) HLK66_20185 PF02535 ZIP Zinc transporter HLK66_20195 PF14537 Cytochrome c3 HLK66_20195 PF00890 FAD binding domain HLK66_20200 PF01575 MaoC like domain HLK66_20205 PF00664 ABC transporter transmembrane region HLK66_20205 PF00005 ABC transporter HLK66_20210 PF00664 ABC transporter transmembrane region HLK66_20210 PF00005 ABC transporter HLK66_20215 PF02322 Cytochrome bd terminal oxidase subunit II HLK66_20220 PF01654 Cytochrome bd terminal oxidase subunit I HLK66_20230 PF02780 Transketolase, C-terminal domain HLK66_20230 PF00456 Transketolase, thiamine diphosphate binding domain HLK66_20230 PF02779 Transketolase, pyrimidine binding domain HLK66_20235 PF00365 Phosphofructokinase HLK66_20240 PF02502 Ribose/Galactose Isomerase HLK66_20245 PF08240 Alcohol dehydrogenase GroES-like domain HLK66_20245 PF00107 Zinc-binding dehydrogenase HLK66_20250 PF00107 Zinc-binding dehydrogenase HLK66_20250 PF08240 Alcohol dehydrogenase GroES-like domain HLK66_20255 PF03611 PTS system sugar-specific permease component HLK66_20260 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HLK66_20265 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HLK66_20280 PF00456 Transketolase, thiamine diphosphate binding domain HLK66_20280 PF02780 Transketolase, C-terminal domain HLK66_20280 PF02779 Transketolase, pyrimidine binding domain HLK66_20285 PF00365 Phosphofructokinase HLK66_20290 PF02502 Ribose/Galactose Isomerase HLK66_20295 PF00248 Aldo/keto reductase family HLK66_20300 PF07690 Major Facilitator Superfamily HLK66_20305 PF01638 HxlR-like helix-turn-helix HLK66_20310 PF01471 Putative peptidoglycan binding domain HLK66_20310 PF17820 PDZ domain HLK66_20310 PF03572 Peptidase family S41 HLK66_20315 PF05067 Manganese containing catalase HLK66_20320 PF00403 Heavy-metal-associated domain HLK66_20325 PF00403 Heavy-metal-associated domain HLK66_20335 PF01551 Peptidase family M23 HLK66_20335 PF04225 Opacity-associated protein A LysM-like domain HLK66_20340 PF18075 FtsX extracellular domain HLK66_20340 PF02687 FtsX-like permease family HLK66_20345 PF00005 ABC transporter HLK66_20350 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 HLK66_20350 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) HLK66_20355 PF02673 Bacitracin resistance protein BacA HLK66_20370 PF00535 Glycosyl transferase family 2 HLK66_20380 PF02810 SEC-C motif HLK66_20380 PF07517 SecA DEAD-like domain HLK66_20380 PF01043 SecA preprotein cross-linking domain HLK66_20380 PF07516 SecA Wing and Scaffold domain HLK66_20395 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HLK66_20395 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HLK66_20400 PF00528 Binding-protein-dependent transport system inner membrane component HLK66_20405 PF00528 Binding-protein-dependent transport system inner membrane component HLK66_20410 PF08402 TOBE domain HLK66_20410 PF00005 ABC transporter HLK66_20420 PF07488 Glycosyl hydrolase family 67 middle domain HLK66_20420 PF03648 Glycosyl hydrolase family 67 N-terminus HLK66_20420 PF07477 Glycosyl hydrolase family 67 C-terminus HLK66_20425 PF00392 Bacterial regulatory proteins, gntR family HLK66_20425 PF07729 FCD domain HLK66_20430 PF02417 Chromate transporter HLK66_20435 PF02417 Chromate transporter HLK66_20455 PF13404 AsnC-type helix-turn-helix domain HLK66_20455 PF01037 Lrp/AsnC ligand binding domain HLK66_20460 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein HLK66_20460 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus HLK66_20465 PF00483 Nucleotidyl transferase HLK66_20480 PF02561 Flagellar protein FliS HLK66_20485 PF07195 Flagellar hook-associated protein 2 C-terminus HLK66_20485 PF02465 Flagellar hook-associated protein 2 N-terminus HLK66_20490 PF03646 FlaG protein HLK66_20500 PF00700 Bacterial flagellin C-terminal helical region HLK66_20500 PF00669 Bacterial flagellin N-terminal helical region HLK66_20510 PF02899 Phage integrase, N-terminal SAM-like domain HLK66_20510 PF00589 Phage integrase family HLK66_20525 PF00589 Phage integrase family HLK66_20525 PF02899 Phage integrase, N-terminal SAM-like domain HLK66_20535 PF07516 SecA Wing and Scaffold domain HLK66_20535 PF01043 SecA preprotein cross-linking domain HLK66_20535 PF07517 SecA DEAD-like domain HLK66_20535 PF02810 SEC-C motif HLK66_20550 PF00700 Bacterial flagellin C-terminal helical region HLK66_20550 PF00669 Bacterial flagellin N-terminal helical region HLK66_20560 PF00589 Phage integrase family HLK66_20560 PF02899 Phage integrase, N-terminal SAM-like domain HLK66_20575 PF00589 Phage integrase family HLK66_20575 PF02899 Phage integrase, N-terminal SAM-like domain HLK66_20590 PF00669 Bacterial flagellin N-terminal helical region HLK66_20590 PF00700 Bacterial flagellin C-terminal helical region HLK66_20595 PF02599 Global regulator protein family HLK66_20600 PF02623 FliW protein HLK66_20610 PF00700 Bacterial flagellin C-terminal helical region HLK66_20610 PF00669 Bacterial flagellin N-terminal helical region HLK66_20615 PF00460 Flagella basal body rod protein HLK66_20615 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HLK66_20640 PF04851 Type III restriction enzyme, res subunit HLK66_20640 PF00271 Helicase conserved C-terminal domain HLK66_20650 PF02645 Uncharacterised protein, DegV family COG1307 HLK66_20655 PF00196 Bacterial regulatory proteins, luxR family HLK66_20655 PF00072 Response regulator receiver domain HLK66_20660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HLK66_20660 PF05384 Sensor protein DegS HLK66_20660 PF07730 Histidine kinase HLK66_20665 PF01205 Uncharacterized protein family UPF0029 HLK66_20665 PF09186 Domain of unknown function (DUF1949) HLK66_20670 PF03816 Cell envelope-related transcriptional attenuator domain HLK66_20675 PF08486 Stage II sporulation protein HLK66_20675 PF04122 Putative cell wall binding repeat 2 HLK66_20685 PF01695 IstB-like ATP binding protein HLK66_20695 PF00953 Glycosyl transferase family 4 HLK66_20700 PF00535 Glycosyl transferase family 2 HLK66_20700 PF01501 Glycosyl transferase family 8 HLK66_20705 PF00005 ABC transporter HLK66_20705 PF08239 Bacterial SH3 domain HLK66_20710 PF01061 ABC-2 type transporter HLK66_20715 PF08239 Bacterial SH3 domain HLK66_20715 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase HLK66_20715 PF05036 Sporulation related domain HLK66_20720 PF00483 Nucleotidyl transferase HLK66_20725 PF03816 Cell envelope-related transcriptional attenuator domain HLK66_20730 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase HLK66_20735 PF01467 Cytidylyltransferase-like HLK66_20740 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase HLK66_20745 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HLK66_20750 PF16363 GDP-mannose 4,6 dehydratase HLK66_20755 PF00128 Alpha amylase, catalytic domain HLK66_20760 PF03808 Glycosyl transferase WecB/TagA/CpsF family HLK66_20775 PF00436 Single-strand binding protein family HLK66_20780 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HLK66_20780 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HLK66_20780 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HLK66_20780 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HLK66_20790 PF00672 HAMP domain HLK66_20790 PF12729 Four helix bundle sensory module for signal transduction HLK66_20790 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HLK66_20795 PF07690 Major Facilitator Superfamily HLK66_20800 PF00857 Isochorismatase family HLK66_20815 PF00005 ABC transporter HLK66_20825 PF00171 Aldehyde dehydrogenase family HLK66_20840 PF00107 Zinc-binding dehydrogenase HLK66_20840 PF08240 Alcohol dehydrogenase GroES-like domain HLK66_20850 PF00465 Iron-containing alcohol dehydrogenase HLK66_20855 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase HLK66_20855 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HLK66_20860 PF04405 Domain of Unknown function (DUF542) HLK66_20860 PF01814 Hemerythrin HHE cation binding domain HLK66_20865 PF13545 Crp-like helix-turn-helix domain HLK66_20865 PF00027 Cyclic nucleotide-binding domain HLK66_20870 PF06445 GyrI-like small molecule binding domain HLK66_20885 PF06803 Protein of unknown function (DUF1232) HLK66_20890 PF01773 Na+ dependent nucleoside transporter N-terminus HLK66_20890 PF07662 Na+ dependent nucleoside transporter C-terminus HLK66_20900 PF03180 NLPA lipoprotein HLK66_20905 PF00528 Binding-protein-dependent transport system inner membrane component HLK66_20910 PF09383 NIL domain HLK66_20910 PF00005 ABC transporter HLK66_20915 PF00860 Permease family HLK66_20920 PF00156 Phosphoribosyl transferase domain HLK66_20925 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HLK66_20930 PF00486 Transcriptional regulatory protein, C terminal HLK66_20930 PF00072 Response regulator receiver domain HLK66_20935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HLK66_20940 PF00005 ABC transporter HLK66_20945 PF02687 FtsX-like permease family HLK66_20960 PF00155 Aminotransferase class I and II HLK66_20965 PF00512 His Kinase A (phospho-acceptor) domain HLK66_20965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HLK66_20965 PF08447 PAS fold HLK66_20965 PF00989 PAS fold HLK66_20990 PF00106 short chain dehydrogenase HLK66_20995 PF00248 Aldo/keto reductase family HLK66_21000 PF04205 FMN-binding domain HLK66_21000 PF03358 NADPH-dependent FMN reductase HLK66_21000 PF00890 FAD binding domain HLK66_21005 PF14537 Cytochrome c3 HLK66_21005 PF00890 FAD binding domain HLK66_21010 PF00881 Nitroreductase family HLK66_21015 PF01235 Sodium:alanine symporter family HLK66_21025 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain HLK66_21025 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain HLK66_21025 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain HLK66_21065 PF08439 Oligopeptidase F HLK66_21065 PF01432 Peptidase family M3 HLK66_21070 PF00232 Glycosyl hydrolase family 1 HLK66_21075 PF07702 UTRA domain HLK66_21075 PF00392 Bacterial regulatory proteins, gntR family HLK66_21085 PF05227 CHASE3 domain HLK66_21085 PF00672 HAMP domain HLK66_21085 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HLK66_21100 PF03551 Transcriptional regulator PadR-like family HLK66_21105 PF01116 Fructose-bisphosphate aldolase class-II HLK66_21110 PF01116 Fructose-bisphosphate aldolase class-II HLK66_21115 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HLK66_21115 PF02378 Phosphotransferase system, EIIC HLK66_21120 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HLK66_21135 PF02673 Bacitracin resistance protein BacA HLK66_21155 PF00067 Cytochrome P450 HLK66_21160 PF00106 short chain dehydrogenase HLK66_21165 PF07690 Major Facilitator Superfamily HLK66_21170 PF01074 Glycosyl hydrolases family 38 N-terminal domain HLK66_21170 PF07748 Glycosyl hydrolases family 38 C-terminal domain HLK66_21170 PF17677 Glycosyl hydrolases family 38 C-terminal beta sandwich domain HLK66_21170 PF09261 Alpha mannosidase middle domain HLK66_21170 PF18438 Glycosyl hydrolases family 38 C-terminal domain 1 HLK66_21180 PF00392 Bacterial regulatory proteins, gntR family HLK66_21190 PF00072 Response regulator receiver domain HLK66_21190 PF12833 Helix-turn-helix domain HLK66_21195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HLK66_21195 PF06580 Histidine kinase HLK66_21195 PF02743 Cache domain HLK66_21195 PF00672 HAMP domain HLK66_21210 PF00528 Binding-protein-dependent transport system inner membrane component HLK66_21215 PF00528 Binding-protein-dependent transport system inner membrane component HLK66_21220 PF12833 Helix-turn-helix domain HLK66_21220 PF06719 AraC-type transcriptional regulator N-terminus HLK66_21230 PF07690 Major Facilitator Superfamily HLK66_21235 PF00440 Bacterial regulatory proteins, tetR family HLK66_21240 PF00881 Nitroreductase family HLK66_21245 PF12833 Helix-turn-helix domain HLK66_21245 PF00072 Response regulator receiver domain HLK66_21250 PF02743 Cache domain HLK66_21250 PF00672 HAMP domain HLK66_21250 PF06580 Histidine kinase HLK66_21250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HLK66_21260 PF04616 Glycosyl hydrolases family 43 HLK66_21260 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain HLK66_21265 PF01270 Glycosyl hydrolases family 8 HLK66_21270 PF00528 Binding-protein-dependent transport system inner membrane component HLK66_21275 PF00528 Binding-protein-dependent transport system inner membrane component HLK66_21285 PF07702 UTRA domain HLK66_21285 PF00392 Bacterial regulatory proteins, gntR family HLK66_21290 PF13378 Enolase C-terminal domain-like HLK66_21290 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain HLK66_21295 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 HLK66_21295 PF00367 phosphotransferase system, EIIB HLK66_21295 PF02378 Phosphotransferase system, EIIC HLK66_21305 PF00528 Binding-protein-dependent transport system inner membrane component HLK66_21310 PF00005 ABC transporter HLK66_21310 PF08402 TOBE domain HLK66_21320 PF00072 Response regulator receiver domain HLK66_21320 PF12833 Helix-turn-helix domain HLK66_21325 PF06580 Histidine kinase HLK66_21330 PF02378 Phosphotransferase system, EIIC HLK66_21330 PF00367 phosphotransferase system, EIIB HLK66_21335 PF01061 ABC-2 type transporter HLK66_21350 PF13556 PucR C-terminal helix-turn-helix domain HLK66_21350 PF17853 GGDEF-like domain HLK66_21350 PF05651 Putative sugar diacid recognition HLK66_21355 PF02595 Glycerate kinase family HLK66_21360 PF02447 GntP family permease HLK66_21375 PF01156 Inosine-uridine preferring nucleoside hydrolase HLK66_21380 PF00528 Binding-protein-dependent transport system inner membrane component HLK66_21385 PF00528 Binding-protein-dependent transport system inner membrane component HLK66_21390 PF00005 ABC transporter HLK66_21390 PF08402 TOBE domain HLK66_21395 PF01979 Amidohydrolase family HLK66_21395 PF13382 Adenine deaminase C-terminal domain HLK66_21410 PF07883 Cupin domain HLK66_21410 PF12833 Helix-turn-helix domain HLK66_21420 PF00106 short chain dehydrogenase HLK66_21425 PF04542 Sigma-70 region 2 HLK66_21425 PF08281 Sigma-70, region 4 HLK66_21445 PF04307 LexA-binding, inner membrane-associated putative hydrolase HLK66_21450 PF00232 Glycosyl hydrolase family 1 HLK66_21455 PF00232 Glycosyl hydrolase family 1 HLK66_21460 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 HLK66_21460 PF00367 phosphotransferase system, EIIB HLK66_21460 PF02378 Phosphotransferase system, EIIC HLK66_21470 PF01497 Periplasmic binding protein HLK66_21475 PF01032 FecCD transport family HLK66_21480 PF01032 FecCD transport family HLK66_21485 PF00196 Bacterial regulatory proteins, luxR family HLK66_21485 PF00072 Response regulator receiver domain HLK66_21490 PF00563 EAL domain HLK66_21490 PF05231 MASE1 HLK66_21495 PF04397 LytTr DNA-binding domain HLK66_21495 PF00072 Response regulator receiver domain HLK66_21505 PF00753 Metallo-beta-lactamase superfamily HLK66_21510 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HLK66_21520 PF00253 Ribosomal protein S14p/S29e HLK66_21530 PF01116 Fructose-bisphosphate aldolase class-II HLK66_21540 PF03611 PTS system sugar-specific permease component HLK66_21550 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HLK66_21555 PF00296 Luciferase-like monooxygenase HLK66_21560 PF16363 GDP-mannose 4,6 dehydratase HLK66_21570 PF03816 Cell envelope-related transcriptional attenuator domain HLK66_21575 PF00188 Cysteine-rich secretory protein family HLK66_21605 PF13673 Acetyltransferase (GNAT) domain HLK66_21620 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit HLK66_21625 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HLK66_21630 PF02378 Phosphotransferase system, EIIC HLK66_21635 PF00232 Glycosyl hydrolase family 1 HLK66_21640 PF07702 UTRA domain HLK66_21640 PF00392 Bacterial regulatory proteins, gntR family HLK66_21645 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal HLK66_21645 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal HLK66_21655 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HLK66_21655 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HLK66_21665 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HLK66_21665 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HLK66_21670 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HLK66_21670 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HLK66_21675 PF00528 Binding-protein-dependent transport system inner membrane component HLK66_21680 PF00528 Binding-protein-dependent transport system inner membrane component HLK66_21685 PF01547 Bacterial extracellular solute-binding protein HLK66_21690 PF00480 ROK family HLK66_21690 PF01325 Iron dependent repressor, N-terminal DNA binding domain HLK66_21695 PF00149 Calcineurin-like phosphoesterase HLK66_21715 PF04294 VanW like protein HLK66_21720 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HLK66_21735 PF00392 Bacterial regulatory proteins, gntR family HLK66_21745 PF00596 Class II Aldolase and Adducin N-terminal domain HLK66_21750 PF11762 L-arabinose isomerase C-terminal domain HLK66_21750 PF02610 L-arabinose isomerase HLK66_21790 PF03972 MmgE/PrpD family HLK66_21795 PF07687 Peptidase dimerisation domain HLK66_21795 PF01546 Peptidase family M20/M25/M40 HLK66_21800 PF00005 ABC transporter HLK66_21805 PF00528 Binding-protein-dependent transport system inner membrane component HLK66_21810 PF00497 Bacterial extracellular solute-binding proteins, family 3 HLK66_21815 PF00583 Acetyltransferase (GNAT) family HLK66_21820 PF10397 Adenylosuccinate lyase C-terminus HLK66_21820 PF00206 Lyase HLK66_21825 PF00497 Bacterial extracellular solute-binding proteins, family 3 HLK66_21830 PF00155 Aminotransferase class I and II HLK66_21835 PF00465 Iron-containing alcohol dehydrogenase HLK66_21850 PF09962 Uncharacterized conserved protein (DUF2196) HLK66_21855 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HLK66_21855 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HLK66_21865 PF05547 Immune inhibitor A peptidase M6 HLK66_21865 PF00801 PKD domain HLK66_21870 PF01047 MarR family HLK66_21880 PF07690 Major Facilitator Superfamily HLK66_21885 PF00528 Binding-protein-dependent transport system inner membrane component HLK66_21890 PF00528 Binding-protein-dependent transport system inner membrane component HLK66_21895 PF01547 Bacterial extracellular solute-binding protein HLK66_21900 PF14698 Argininosuccinate lyase C-terminal HLK66_21900 PF00206 Lyase HLK66_21920 PF02743 Cache domain HLK66_21920 PF00672 HAMP domain HLK66_21920 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HLK66_21930 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) HLK66_21940 PF00171 Aldehyde dehydrogenase family HLK66_21945 PF00392 Bacterial regulatory proteins, gntR family HLK66_21945 PF07702 UTRA domain HLK66_21950 PF01380 SIS domain HLK66_21955 PF00294 pfkB family carbohydrate kinase HLK66_21960 PF01261 Xylose isomerase-like TIM barrel HLK66_21965 PF00005 ABC transporter HLK66_21970 PF00528 Binding-protein-dependent transport system inner membrane component HLK66_21975 PF00497 Bacterial extracellular solute-binding proteins, family 3 HLK66_21985 PF01695 IstB-like ATP binding protein HLK66_21995 PF00528 Binding-protein-dependent transport system inner membrane component HLK66_22000 PF00528 Binding-protein-dependent transport system inner membrane component HLK66_22010 PF00072 Response regulator receiver domain HLK66_22010 PF04397 LytTr DNA-binding domain HLK66_22015 PF00672 HAMP domain HLK66_22015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HLK66_22015 PF06580 Histidine kinase HLK66_22015 PF02743 Cache domain HLK66_22020 PF01081 KDPG and KHG aldolase HLK66_22025 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HLK66_22025 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HLK66_22030 PF13419 Haloacid dehalogenase-like hydrolase HLK66_22035 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HLK66_22035 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HLK66_22040 PF03610 PTS system fructose IIA component HLK66_22040 PF03830 PTS system sorbose subfamily IIB component HLK66_22060 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HLK66_22060 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain HLK66_22080 PF00990 Diguanylate cyclase, GGDEF domain HLK66_22080 PF00563 EAL domain HLK66_22080 PF03707 Bacterial signalling protein N terminal repeat HLK66_22090 PF00588 SpoU rRNA Methylase family HLK66_22100 PF00005 ABC transporter HLK66_22105 PF00512 His Kinase A (phospho-acceptor) domain HLK66_22105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HLK66_22110 PF00072 Response regulator receiver domain HLK66_22110 PF00486 Transcriptional regulatory protein, C terminal HLK66_22115 PF01872 RibD C-terminal domain HLK66_22125 PF01380 SIS domain HLK66_22130 PF03613 PTS system mannose/fructose/sorbose family IID component HLK66_22135 PF03609 PTS system sorbose-specific iic component HLK66_22140 PF03830 PTS system sorbose subfamily IIB component HLK66_22145 PF03610 PTS system fructose IIA component HLK66_22145 PF03830 PTS system sorbose subfamily IIB component HLK66_22150 PF00480 ROK family HLK66_22155 PF00872 Transposase, Mutator family HLK66_22165 PF13580 SIS domain HLK66_22175 PF02633 Creatinine amidohydrolase HLK66_22180 PF02126 Phosphotriesterase family HLK66_22185 PF03611 PTS system sugar-specific permease component HLK66_22190 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HLK66_22195 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HLK66_22200 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HLK66_22215 PF07969 Amidohydrolase family HLK66_22220 PF07969 Amidohydrolase family HLK66_22230 PF00528 Binding-protein-dependent transport system inner membrane component HLK66_22240 PF00005 ABC transporter HLK66_22245 PF02633 Creatinine amidohydrolase HLK66_22250 PF14070 Putative motility protein HLK66_22260 PF01037 Lrp/AsnC ligand binding domain HLK66_22285 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 HLK66_22285 PF00367 phosphotransferase system, EIIB HLK66_22285 PF02378 Phosphotransferase system, EIIC HLK66_22300 PF14070 Putative motility protein HLK66_22330 PF04794 YdjC-like protein HLK66_22335 PF00480 ROK family HLK66_22340 PF00392 Bacterial regulatory proteins, gntR family HLK66_22340 PF07702 UTRA domain HLK66_22350 PF13580 SIS domain HLK66_22370 PF01979 Amidohydrolase family HLK66_22375 PF01180 Dihydroorotate dehydrogenase HLK66_22380 PF00970 Oxidoreductase FAD-binding domain HLK66_22380 PF00175 Oxidoreductase NAD-binding domain HLK66_22380 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B HLK66_22385 PF01546 Peptidase family M20/M25/M40 HLK66_22385 PF07687 Peptidase dimerisation domain HLK66_22395 PF07690 Major Facilitator Superfamily HLK66_22405 PF10460 Peptidase M30 HLK66_22410 PF03547 Membrane transport protein HLK66_22415 PF03949 Malic enzyme, NAD binding domain HLK66_22415 PF00390 Malic enzyme, N-terminal domain HLK66_22440 PF00860 Permease family HLK66_22445 PF01979 Amidohydrolase family HLK66_22450 PF03372 Endonuclease/Exonuclease/phosphatase family HLK66_22455 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 HLK66_22455 PF00367 phosphotransferase system, EIIB HLK66_22455 PF02378 Phosphotransferase system, EIIC HLK66_22465 PF00834 Ribulose-phosphate 3 epimerase family HLK66_22470 PF00356 Bacterial regulatory proteins, lacI family HLK66_22505 PF00156 Phosphoribosyl transferase domain HLK66_22510 PF00923 Transaldolase/Fructose-6-phosphate aldolase HLK66_22520 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HLK66_22525 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HLK66_22550 PF13335 Magnesium chelatase, subunit ChlI C-terminal HLK66_22550 PF01078 Magnesium chelatase, subunit ChlI HLK66_22560 PF13333 Integrase core domain HLK66_22560 PF13276 HTH-like domain HLK66_22560 PF00665 Integrase core domain HLK66_22565 PF00665 Integrase core domain HLK66_22570 PF01695 IstB-like ATP binding protein HLK66_22580 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain HLK66_22580 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain HLK66_22580 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain HLK66_22585 PF01050 Mannose-6-phosphate isomerase HLK66_22585 PF00483 Nucleotidyl transferase HLK66_22590 PF16363 GDP-mannose 4,6 dehydratase HLK66_22595 PF04321 RmlD substrate binding domain HLK66_22600 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase HLK66_22605 PF00483 Nucleotidyl transferase HLK66_22615 PF00535 Glycosyl transferase family 2 HLK66_22615 PF00534 Glycosyl transferases group 1 HLK66_22630 PF00535 Glycosyl transferase family 2 HLK66_22635 PF01370 NAD dependent epimerase/dehydratase family HLK66_22640 PF00132 Bacterial transferase hexapeptide (six repeats) HLK66_22650 PF02397 Bacterial sugar transferase HLK66_22660 PF13614 AAA domain HLK66_22665 PF02706 Chain length determinant protein HLK66_22665 PF13807 G-rich domain on putative tyrosine kinase HLK66_22675 PF08671 Anti-repressor SinI HLK66_22675 PF01381 Helix-turn-helix HLK66_22685 PF02603 HPr Serine kinase N terminus HLK66_22685 PF07475 HPr Serine kinase C-terminal domain HLK66_22700 PF01050 Mannose-6-phosphate isomerase HLK66_22700 PF00483 Nucleotidyl transferase HLK66_22705 PF00664 ABC transporter transmembrane region HLK66_22705 PF00005 ABC transporter HLK66_22730 PF13439 Glycosyltransferase Family 4 HLK66_22730 PF00534 Glycosyl transferases group 1 HLK66_22740 PF04230 Polysaccharide pyruvyl transferase HLK66_22745 PF00535 Glycosyl transferase family 2 HLK66_22745 PF01501 Glycosyl transferase family 8 HLK66_22750 PF13439 Glycosyltransferase Family 4 HLK66_22750 PF00534 Glycosyl transferases group 1 HLK66_22775 PF13439 Glycosyltransferase Family 4 HLK66_22775 PF00534 Glycosyl transferases group 1 HLK66_22780 PF13439 Glycosyltransferase Family 4 HLK66_22780 PF00534 Glycosyl transferases group 1 HLK66_22785 PF00534 Glycosyl transferases group 1 HLK66_22785 PF13439 Glycosyltransferase Family 4 HLK66_22795 PF00534 Glycosyl transferases group 1 HLK66_22795 PF13579 Glycosyl transferase 4-like domain HLK66_22800 PF00535 Glycosyl transferase family 2 HLK66_22805 PF02397 Bacterial sugar transferase HLK66_22810 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain HLK66_22810 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain HLK66_22810 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain HLK66_22815 PF13614 AAA domain HLK66_22820 PF02706 Chain length determinant protein HLK66_22820 PF13807 G-rich domain on putative tyrosine kinase HLK66_22825 PF00924 Mechanosensitive ion channel HLK66_22840 PF01230 HIT domain HLK66_22850 PF07690 Major Facilitator Superfamily HLK66_22855 PF06445 GyrI-like small molecule binding domain HLK66_22855 PF13411 MerR HTH family regulatory protein HLK66_22865 PF01047 MarR family HLK66_22870 PF00664 ABC transporter transmembrane region HLK66_22870 PF00005 ABC transporter HLK66_22875 PF00005 ABC transporter HLK66_22875 PF00664 ABC transporter transmembrane region HLK66_22890 PF00884 Sulfatase HLK66_22895 PF02378 Phosphotransferase system, EIIC HLK66_22895 PF00367 phosphotransferase system, EIIB HLK66_22895 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 HLK66_22900 PF00874 PRD domain HLK66_22900 PF03123 CAT RNA binding domain HLK66_22905 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 HLK66_22910 PF05043 Mga helix-turn-helix domain HLK66_22910 PF08279 HTH domain HLK66_22910 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HLK66_22910 PF00874 PRD domain HLK66_22920 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HLK66_22925 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit HLK66_22930 PF02378 Phosphotransferase system, EIIC HLK66_22945 PF00248 Aldo/keto reductase family HLK66_22950 PF18277 AbrB C-terminal domain HLK66_22950 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin HLK66_22955 PF17158 Membrane-associated sensor, integral membrane domain HLK66_22955 PF00990 Diguanylate cyclase, GGDEF domain HLK66_22960 PF02694 Uncharacterised BCR, YnfA/UPF0060 family HLK66_22975 PF00072 Response regulator receiver domain HLK66_22975 PF01966 HD domain HLK66_22980 PF01047 MarR family HLK66_22990 PF07690 Major Facilitator Superfamily HLK66_23000 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HLK66_23000 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HLK66_23005 PF01476 LysM domain HLK66_23010 PF07690 Major Facilitator Superfamily HLK66_23015 PF12697 Alpha/beta hydrolase family HLK66_23020 PF17922 Tetracyclin repressor-like, C-terminal domain HLK66_23020 PF00440 Bacterial regulatory proteins, tetR family HLK66_23030 PF00248 Aldo/keto reductase family HLK66_23035 PF00480 ROK family HLK66_23040 PF00232 Glycosyl hydrolase family 1 HLK66_23050 PF05448 Acetyl xylan esterase (AXE1) HLK66_23055 PF00392 Bacterial regulatory proteins, gntR family HLK66_23060 PF03773 Predicted permease HLK66_23065 PF00586 AIR synthase related protein, N-terminal domain HLK66_23065 PF02769 AIR synthase related protein, C-terminal domain HLK66_23070 PF00581 Rhodanese-like domain HLK66_23080 PF00483 Nucleotidyl transferase HLK66_23085 PF07563 Protein of unknown function (DUF1541) HLK66_23090 PF08447 PAS fold HLK66_23090 PF00512 His Kinase A (phospho-acceptor) domain HLK66_23090 PF00989 PAS fold HLK66_23090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HLK66_23095 PF00999 Sodium/hydrogen exchanger family HLK66_23125 PF10518 TAT (twin-arginine translocation) pathway signal sequence HLK66_23125 PF00149 Calcineurin-like phosphoesterase HLK66_23135 PF00196 Bacterial regulatory proteins, luxR family HLK66_23135 PF00072 Response regulator receiver domain HLK66_23140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HLK66_23140 PF07730 Histidine kinase HLK66_23150 PF00005 ABC transporter HLK66_23170 PF00579 tRNA synthetases class I (W and Y) HLK66_23175 PF00579 tRNA synthetases class I (W and Y) HLK66_23175 PF01479 S4 domain HLK66_23190 PF00892 EamA-like transporter family HLK66_23195 PF01476 LysM domain HLK66_23195 PF00877 NlpC/P60 family HLK66_23200 PF12826 Helix-hairpin-helix motif HLK66_23200 PF03119 NAD-dependent DNA ligase C4 zinc finger domain HLK66_23200 PF03120 NAD-dependent DNA ligase OB-fold domain HLK66_23200 PF01653 NAD-dependent DNA ligase adenylation domain HLK66_23200 PF00533 BRCA1 C Terminus (BRCT) domain HLK66_23205 PF09529 Integral membrane protein (intg_mem_TP0381) HLK66_23215 PF03447 Homoserine dehydrogenase, NAD binding domain HLK66_23215 PF00742 Homoserine dehydrogenase HLK66_23215 PF01842 ACT domain HLK66_23220 PF08281 Sigma-70, region 4 HLK66_23220 PF04542 Sigma-70 region 2 HLK66_23225 PF13791 Sigma factor regulator C-terminal HLK66_23225 PF13800 Sigma factor regulator N-terminal HLK66_23230 PF04293 SpoVR like protein HLK66_23235 PF05223 NTF2-like N-terminal transpeptidase domain HLK66_23235 PF00905 Penicillin binding protein transpeptidase domain HLK66_23235 PF03717 Penicillin-binding Protein dimerisation domain HLK66_23240 PF04134 Protein of unknown function, DUF393 HLK66_23250 PF00877 NlpC/P60 family HLK66_23250 PF01476 LysM domain HLK66_23255 PF04434 SWIM zinc finger HLK66_23260 PF12419 SNF2 Helicase protein HLK66_23260 PF00271 Helicase conserved C-terminal domain HLK66_23260 PF00176 SNF2 family N-terminal domain HLK66_23265 PF00082 Subtilase family HLK66_23265 PF06280 Fn3-like domain HLK66_23265 PF02225 PA domain HLK66_23265 PF00746 LPXTG cell wall anchor motif HLK66_23270 PF14183 YwpF-like protein HLK66_23280 PF07977 FabA-like domain HLK66_23290 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HLK66_23290 PF00460 Flagella basal body rod protein HLK66_23295 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HLK66_23295 PF00460 Flagella basal body rod protein HLK66_23305 PF12116 Stage III sporulation protein D HLK66_23310 PF01551 Peptidase family M23 HLK66_23320 PF08486 Stage II sporulation protein HLK66_23325 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HLK66_23335 PF06612 Protein of unknown function (DUF1146) HLK66_23340 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain HLK66_23340 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain HLK66_23345 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HLK66_23345 PF02874 ATP synthase alpha/beta family, beta-barrel domain HLK66_23350 PF00231 ATP synthase HLK66_23355 PF02874 ATP synthase alpha/beta family, beta-barrel domain HLK66_23355 PF00306 ATP synthase alpha/beta chain, C terminal domain HLK66_23355 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HLK66_23360 PF00213 ATP synthase delta (OSCP) subunit HLK66_23365 PF00430 ATP synthase B/B' CF(0) HLK66_23370 PF00137 ATP synthase subunit C HLK66_23375 PF00119 ATP synthase A chain HLK66_23380 PF03899 ATP synthase I chain HLK66_23385 PF00082 Subtilase family HLK66_23385 PF05922 Peptidase inhibitor I9 HLK66_23385 PF02225 PA domain HLK66_23385 PF13860 FlgD Ig-like domain HLK66_23395 PF00464 Serine hydroxymethyltransferase HLK66_23400 PF04260 Protein of unknown function (DUF436) HLK66_23405 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HLK66_23405 PF00672 HAMP domain HLK66_23405 PF02743 Cache domain HLK66_23410 PF01451 Low molecular weight phosphotyrosine protein phosphatase HLK66_23415 PF02659 Putative manganese efflux pump HLK66_23420 PF03481 Putative GTP-binding controlling metal-binding HLK66_23420 PF01300 Telomere recombination HLK66_23430 PF00072 Response regulator receiver domain HLK66_23430 PF00158 Sigma-54 interaction domain HLK66_23430 PF02954 Bacterial regulatory protein, Fis family HLK66_23440 PF00171 Aldehyde dehydrogenase family HLK66_23445 PF01619 Proline dehydrogenase HLK66_23450 PF00950 ABC 3 transport family HLK66_23455 PF00950 ABC 3 transport family HLK66_23460 PF00005 ABC transporter HLK66_23465 PF01297 Zinc-uptake complex component A periplasmic HLK66_23470 PF09551 Stage II sporulation protein R (spore_II_R) HLK66_23475 PF17827 PrmC N-terminal domain HLK66_23475 PF13847 Methyltransferase domain HLK66_23480 PF00472 RF-1 domain HLK66_23480 PF03462 PCRF domain HLK66_23485 PF01740 STAS domain HLK66_23490 PF00571 CBS domain HLK66_23490 PF03471 Transporter associated domain HLK66_23490 PF01595 Cyclin M transmembrane N-terminal domain HLK66_23495 PF00571 CBS domain HLK66_23495 PF01595 Cyclin M transmembrane N-terminal domain HLK66_23495 PF03471 Transporter associated domain HLK66_23505 PF13333 Integrase core domain HLK66_23505 PF13276 HTH-like domain HLK66_23505 PF00665 Integrase core domain HLK66_23515 PF00265 Thymidine kinase HLK66_23520 PF01197 Ribosomal protein L31 HLK66_23525 PF07497 Rho termination factor, RNA-binding domain HLK66_23525 PF07498 Rho termination factor, N-terminal domain HLK66_23525 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HLK66_23530 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HLK66_23535 PF01116 Fructose-bisphosphate aldolase class-II HLK66_23540 PF00072 Response regulator receiver domain HLK66_23545 PF10740 Domain of unknown function (DUF2529) HLK66_23550 PF00117 Glutamine amidotransferase class-I HLK66_23550 PF06418 CTP synthase N-terminus HLK66_23555 PF05066 HB1, ASXL, restriction endonuclease HTH domain HLK66_23565 PF13091 PLD-like domain HLK66_23575 PF04397 LytTr DNA-binding domain HLK66_23575 PF00072 Response regulator receiver domain HLK66_23580 PF00005 ABC transporter HLK66_23585 PF12679 ABC-2 family transporter protein HLK66_23595 PF00005 ABC transporter HLK66_23610 PF00486 Transcriptional regulatory protein, C terminal HLK66_23610 PF00072 Response regulator receiver domain HLK66_23620 PF05746 DALR anticodon binding domain HLK66_23620 PF00750 tRNA synthetases class I (R) HLK66_23620 PF03485 Arginyl tRNA synthetase N terminal domain HLK66_23625 PF09148 Domain of unknown function (DUF1934) HLK66_23630 PF08239 Bacterial SH3 domain HLK66_23630 PF00877 NlpC/P60 family HLK66_23630 PF01476 LysM domain HLK66_23635 PF00491 Arginase family HLK66_23640 PF17284 Spermidine synthase tetramerisation domain HLK66_23645 PF00912 Transglycosylase HLK66_23645 PF00905 Penicillin binding protein transpeptidase domain HLK66_23655 PF00488 MutS domain V HLK66_23655 PF01713 Smr domain HLK66_23660 PF08741 YwhD family HLK66_23665 PF02163 Peptidase family M50 HLK66_23670 PF01361 Tautomerase enzyme HLK66_23680 PF01966 HD domain HLK66_23690 PF07690 Major Facilitator Superfamily HLK66_23700 PF03099 Biotin/lipoate A/B protein ligase family HLK66_23705 PF01515 Phosphate acetyl/butaryl transferase HLK66_23715 PF09671 Spore coat protein (Spore_GerQ) HLK66_23720 PF04241 Protein of unknown function (DUF423) HLK66_23735 PF03167 Uracil DNA glycosylase superfamily HLK66_23745 PF11181 Heat induced stress protein YflT HLK66_23750 PF00899 ThiF family HLK66_23755 PF02597 ThiS family HLK66_23760 PF02391 MoaE protein HLK66_23765 PF08543 Phosphomethylpyrimidine kinase HLK66_23770 PF08830 Protein of unknown function (DUF1806) HLK66_23775 PF02585 GlcNAc-PI de-N-acetylase HLK66_23780 PF07859 alpha/beta hydrolase fold HLK66_23795 PF01654 Cytochrome bd terminal oxidase subunit I HLK66_23800 PF02322 Cytochrome bd terminal oxidase subunit II HLK66_23805 PF00664 ABC transporter transmembrane region HLK66_23805 PF00005 ABC transporter HLK66_23810 PF00005 ABC transporter HLK66_23810 PF00664 ABC transporter transmembrane region HLK66_23815 PF04073 Aminoacyl-tRNA editing domain HLK66_23820 PF08241 Methyltransferase domain HLK66_23825 PF07992 Pyridine nucleotide-disulphide oxidoreductase HLK66_23830 PF11975 Family 4 glycosyl hydrolase C-terminal domain HLK66_23830 PF02056 Family 4 glycosyl hydrolase HLK66_23835 PF06738 Putative threonine/serine exporter HLK66_23835 PF12821 Threonine/Serine exporter, ThrE HLK66_23840 PF06738 Putative threonine/serine exporter HLK66_23845 PF13411 MerR HTH family regulatory protein HLK66_23860 PF00005 ABC transporter HLK66_23865 PF01262 Alanine dehydrogenase/PNT, C-terminal domain HLK66_23865 PF05222 Alanine dehydrogenase/PNT, N-terminal domain HLK66_23870 PF13556 PucR C-terminal helix-turn-helix domain HLK66_23870 PF17853 GGDEF-like domain HLK66_23870 PF06018 CodY GAF-like domain HLK66_23875 PF04794 YdjC-like protein HLK66_23880 PF02056 Family 4 glycosyl hydrolase HLK66_23880 PF11975 Family 4 glycosyl hydrolase C-terminal domain HLK66_23885 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit HLK66_23890 PF02378 Phosphotransferase system, EIIC HLK66_23895 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HLK66_23900 PF07702 UTRA domain HLK66_23900 PF00392 Bacterial regulatory proteins, gntR family HLK66_23915 PF00528 Binding-protein-dependent transport system inner membrane component HLK66_23920 PF00005 ABC transporter HLK66_23925 PF01758 Sodium Bile acid symporter family HLK66_23930 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit HLK66_23935 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HLK66_23940 PF00232 Glycosyl hydrolase family 1 HLK66_23950 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HLK66_23950 PF08279 HTH domain HLK66_23950 PF05043 Mga helix-turn-helix domain HLK66_23950 PF00874 PRD domain HLK66_23955 PF02245 Methylpurine-DNA glycosylase (MPG) HLK66_23960 PF07992 Pyridine nucleotide-disulphide oxidoreductase HLK66_23960 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HLK66_23975 PF00881 Nitroreductase family HLK66_24010 PF17853 GGDEF-like domain HLK66_24010 PF13556 PucR C-terminal helix-turn-helix domain HLK66_24010 PF07905 Purine catabolism regulatory protein-like family HLK66_24020 PF07690 Major Facilitator Superfamily HLK66_24025 PF01554 MatE HLK66_24035 PF00294 pfkB family carbohydrate kinase HLK66_24045 PF00356 Bacterial regulatory proteins, lacI family HLK66_24050 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family HLK66_24055 PF01380 SIS domain HLK66_24060 PF00356 Bacterial regulatory proteins, lacI family HLK66_24065 PF16657 Maltogenic Amylase, C-terminal domain HLK66_24065 PF02903 Alpha amylase, N-terminal ig-like domain HLK66_24065 PF00128 Alpha amylase, catalytic domain HLK66_24070 PF13419 Haloacid dehalogenase-like hydrolase HLK66_24075 PF03636 Glycosyl hydrolase family 65, N-terminal domain HLK66_24075 PF03632 Glycosyl hydrolase family 65 central catalytic domain HLK66_24075 PF03633 Glycosyl hydrolase family 65, C-terminal domain HLK66_24085 PF00528 Binding-protein-dependent transport system inner membrane component HLK66_24090 PF00528 Binding-protein-dependent transport system inner membrane component HLK66_24095 PF13416 Bacterial extracellular solute-binding protein HLK66_24100 PF02378 Phosphotransferase system, EIIC HLK66_24100 PF00367 phosphotransferase system, EIIB HLK66_24105 PF02361 Cobalt transport protein HLK66_24110 PF00005 ABC transporter HLK66_24115 PF09819 ABC-type cobalt transport system, permease component HLK66_24120 PF03070 TENA/THI-4/PQQC family HLK66_24125 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain HLK66_24125 PF00056 lactate/malate dehydrogenase, NAD binding domain HLK66_24130 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain HLK66_24135 PF00005 ABC transporter HLK66_24140 PF12399 Branched-chain amino acid ATP-binding cassette transporter HLK66_24140 PF00005 ABC transporter HLK66_24145 PF11862 Domain of unknown function (DUF3382) HLK66_24145 PF02653 Branched-chain amino acid transport system / permease component HLK66_24155 PF13458 Periplasmic binding protein HLK66_24170 PF07992 Pyridine nucleotide-disulphide oxidoreductase HLK66_24175 PF00005 ABC transporter HLK66_24175 PF00571 CBS domain HLK66_24180 PF00528 Binding-protein-dependent transport system inner membrane component HLK66_24190 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain HLK66_24190 PF04616 Glycosyl hydrolases family 43 HLK66_24205 PF01738 Dienelactone hydrolase family HLK66_24210 PF00295 Glycosyl hydrolases family 28 HLK66_24215 PF07470 Glycosyl Hydrolase Family 88 HLK66_24220 PF13416 Bacterial extracellular solute-binding protein HLK66_24230 PF00528 Binding-protein-dependent transport system inner membrane component HLK66_24235 PF00528 Binding-protein-dependent transport system inner membrane component HLK66_24240 PF17853 GGDEF-like domain HLK66_24240 PF12833 Helix-turn-helix domain HLK66_24250 PF08666 SAF domain HLK66_24250 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus HLK66_24255 PF02614 Glucuronate isomerase HLK66_24260 PF07859 alpha/beta hydrolase fold HLK66_24260 PF13472 GDSL-like Lipase/Acylhydrolase family HLK66_24265 PF13472 GDSL-like Lipase/Acylhydrolase family HLK66_24280 PF00083 Sugar (and other) transporter HLK66_24310 PF13454 FAD-NAD(P)-binding HLK66_24335 PF00478 IMP dehydrogenase / GMP reductase domain HLK66_24345 PF13426 PAS domain HLK66_24345 PF07228 Stage II sporulation protein E (SpoIIE) HLK66_24350 PF01739 CheR methyltransferase, SAM binding domain HLK66_24350 PF03705 CheR methyltransferase, all-alpha domain HLK66_24355 PF00072 Response regulator receiver domain HLK66_24355 PF01627 Hpt domain HLK66_24355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HLK66_24355 PF00512 His Kinase A (phospho-acceptor) domain HLK66_24365 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HLK66_24365 PF00005 ABC transporter HLK66_24370 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HLK66_24370 PF00005 ABC transporter HLK66_24375 PF00528 Binding-protein-dependent transport system inner membrane component HLK66_24375 PF12911 N-terminal TM domain of oligopeptide transport permease C HLK66_24380 PF00528 Binding-protein-dependent transport system inner membrane component HLK66_24385 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HLK66_24395 PF13193 AMP-binding enzyme C-terminal domain HLK66_24395 PF00501 AMP-binding enzyme HLK66_24400 PF00248 Aldo/keto reductase family HLK66_24405 PF14489 QueF-like protein HLK66_24410 PF03334 Na+/H+ antiporter subunit HLK66_24415 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) HLK66_24420 PF01899 Na+/H+ ion antiporter subunit HLK66_24425 PF00361 Proton-conducting membrane transporter HLK66_24435 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter HLK66_24450 PF00589 Phage integrase family HLK66_24455 PF03129 Anticodon binding domain HLK66_24455 PF13393 Histidyl-tRNA synthetase HLK66_24460 PF03932 CutC family HLK66_24465 PF00756 Putative esterase HLK66_24470 PF00356 Bacterial regulatory proteins, lacI family HLK66_24475 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain HLK66_24480 PF00933 Glycosyl hydrolase family 3 N terminal domain HLK66_24480 PF14310 Fibronectin type III-like domain HLK66_24480 PF01915 Glycosyl hydrolase family 3 C-terminal domain HLK66_24485 PF00528 Binding-protein-dependent transport system inner membrane component HLK66_24490 PF00528 Binding-protein-dependent transport system inner membrane component HLK66_24500 PF04230 Polysaccharide pyruvyl transferase HLK66_24510 PF03747 ADP-ribosylglycohydrolase HLK66_24535 PF00005 ABC transporter HLK66_24545 PF13091 PLD-like domain HLK66_24550 PF00578 AhpC/TSA family HLK66_24550 PF10417 C-terminal domain of 1-Cys peroxiredoxin HLK66_24555 PF07992 Pyridine nucleotide-disulphide oxidoreductase HLK66_24555 PF13192 Thioredoxin domain HLK66_24575 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HLK66_24580 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HLK66_24580 PF08279 HTH domain HLK66_24580 PF00874 PRD domain HLK66_24580 PF05043 Mga helix-turn-helix domain HLK66_24585 PF00232 Glycosyl hydrolase family 1 HLK66_24590 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit HLK66_24595 PF02378 Phosphotransferase system, EIIC HLK66_24600 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HLK66_24605 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain HLK66_24605 PF04616 Glycosyl hydrolases family 43 HLK66_24610 PF06039 Malate:quinone oxidoreductase (Mqo) HLK66_24615 PF03180 NLPA lipoprotein HLK66_24620 PF00528 Binding-protein-dependent transport system inner membrane component HLK66_24625 PF09383 NIL domain HLK66_24625 PF00005 ABC transporter HLK66_24630 PF01810 LysE type translocator HLK66_24635 PF00392 Bacterial regulatory proteins, gntR family HLK66_24635 PF00155 Aminotransferase class I and II HLK66_24650 PF00296 Luciferase-like monooxygenase HLK66_24655 PF00296 Luciferase-like monooxygenase HLK66_24665 PF16736 Single Cache-like HLK66_24665 PF00989 PAS fold HLK66_24665 PF00512 His Kinase A (phospho-acceptor) domain HLK66_24665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HLK66_24670 PF00072 Response regulator receiver domain HLK66_24670 PF00486 Transcriptional regulatory protein, C terminal HLK66_24675 PF01061 ABC-2 type transporter HLK66_24680 PF13732 Domain of unknown function (DUF4162) HLK66_24680 PF00005 ABC transporter HLK66_24685 PF03831 PhnA domain HLK66_24685 PF08274 PhnA Zinc-Ribbon HLK66_24695 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HLK66_24700 PF00005 ABC transporter HLK66_24705 PF00528 Binding-protein-dependent transport system inner membrane component HLK66_24710 PF00497 Bacterial extracellular solute-binding proteins, family 3 HLK66_24715 PF00027 Cyclic nucleotide-binding domain HLK66_24720 PF12832 MFS_1 like family HLK66_24730 PF00209 Sodium:neurotransmitter symporter family HLK66_24735 PF03880 DbpA RNA binding domain HLK66_24735 PF00270 DEAD/DEAH box helicase HLK66_24735 PF00271 Helicase conserved C-terminal domain HLK66_24740 PF04914 DltD protein HLK66_24745 PF00550 Phosphopantetheine attachment site HLK66_24750 PF03062 MBOAT, membrane-bound O-acyltransferase family HLK66_24755 PF13193 AMP-binding enzyme C-terminal domain HLK66_24755 PF00501 AMP-binding enzyme HLK66_24760 PF12459 D-Ala-teichoic acid biosynthesis protein HLK66_24765 PF00072 Response regulator receiver domain HLK66_24765 PF00486 Transcriptional regulatory protein, C terminal HLK66_24770 PF00672 HAMP domain HLK66_24770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HLK66_24770 PF00512 His Kinase A (phospho-acceptor) domain HLK66_24770 PF00989 PAS fold HLK66_24770 PF18698 Histidine kinase sensor domain HLK66_24780 PF00892 EamA-like transporter family HLK66_24785 PF00155 Aminotransferase class I and II HLK66_24785 PF00392 Bacterial regulatory proteins, gntR family HLK66_24790 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain HLK66_24790 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain HLK66_24795 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain HLK66_24795 PF00730 HhH-GPD superfamily base excision DNA repair protein HLK66_24800 PF12833 Helix-turn-helix domain HLK66_24800 PF02805 Metal binding domain of Ada HLK66_24810 PF00005 ABC transporter HLK66_24815 PF00528 Binding-protein-dependent transport system inner membrane component HLK66_24820 PF00497 Bacterial extracellular solute-binding proteins, family 3 HLK66_24835 PF02086 D12 class N6 adenine-specific DNA methyltransferase HLK66_24845 PF08281 Sigma-70, region 4 HLK66_24845 PF04542 Sigma-70 region 2 HLK66_24855 PF07690 Major Facilitator Superfamily HLK66_24860 PF01040 UbiA prenyltransferase family HLK66_24865 PF12804 MobA-like NTP transferase domain HLK66_24870 PF00027 Cyclic nucleotide-binding domain HLK66_24870 PF00325 Bacterial regulatory proteins, crp family HLK66_24875 PF03205 Molybdopterin guanine dinucleotide synthesis protein B HLK66_24885 PF02391 MoaE protein HLK66_24890 PF03453 MoeA N-terminal region (domain I and II) HLK66_24890 PF00994 Probable molybdopterin binding domain HLK66_24890 PF03454 MoeA C-terminal region (domain IV) HLK66_24895 PF00899 ThiF family HLK66_24900 PF04055 Radical SAM superfamily HLK66_24900 PF06463 Molybdenum Cofactor Synthesis C HLK66_24910 PF02665 Nitrate reductase gamma subunit HLK66_24915 PF02613 Nitrate reductase delta subunit HLK66_24920 PF13247 4Fe-4S dicluster domain HLK66_24920 PF14711 Respiratory nitrate reductase beta C-terminal HLK66_24925 PF00384 Molybdopterin oxidoreductase HLK66_24925 PF14710 Respiratory nitrate reductase alpha N-terminal HLK66_24925 PF01568 Molydopterin dinucleotide binding domain HLK66_24930 PF00528 Binding-protein-dependent transport system inner membrane component HLK66_24940 PF01967 MoaC family HLK66_24960 PF00892 EamA-like transporter family HLK66_24965 PF00392 Bacterial regulatory proteins, gntR family HLK66_24965 PF00155 Aminotransferase class I and II HLK66_25000 PF00239 Resolvase, N terminal domain HLK66_25000 PF02796 Helix-turn-helix domain of resolvase HLK66_25015 PF07508 Recombinase HLK66_25015 PF00239 Resolvase, N terminal domain HLK66_25065 PF02899 Phage integrase, N-terminal SAM-like domain HLK66_25065 PF00589 Phage integrase family HLK66_25075 PF00271 Helicase conserved C-terminal domain HLK66_25075 PF08494 DEAD/H associated HLK66_25075 PF00270 DEAD/DEAH box helicase HLK66_25105 PF02384 N-6 DNA Methylase HLK66_25105 PF12161 HsdM N-terminal domain HLK66_25125 PF00580 UvrD/REP helicase N-terminal domain HLK66_25125 PF13361 UvrD-like helicase C-terminal domain HLK66_25130 PF02463 RecF/RecN/SMC N terminal domain HLK66_25145 PF02590 Predicted SPOUT methyltransferase HLK66_25155 PF13180 PDZ domain HLK66_25160 PF00753 Metallo-beta-lactamase superfamily HLK66_25165 PF09648 YycH protein HLK66_25170 PF07435 YycH protein HLK66_25175 PF00512 His Kinase A (phospho-acceptor) domain HLK66_25175 PF00672 HAMP domain HLK66_25175 PF13426 PAS domain HLK66_25175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HLK66_25180 PF00486 Transcriptional regulatory protein, C terminal HLK66_25180 PF00072 Response regulator receiver domain HLK66_25205 PF00709 Adenylosuccinate synthetase HLK66_25210 PF02190 ATP-dependent protease La (LON) substrate-binding domain HLK66_25210 PF05362 Lon protease (S16) C-terminal proteolytic domain HLK66_25210 PF00004 ATPase family associated with various cellular activities (AAA) HLK66_25225 PF03796 DnaB-like helicase C terminal domain HLK66_25225 PF00772 DnaB-like helicase N terminal domain HLK66_25230 PF01281 Ribosomal protein L9, N-terminal domain HLK66_25230 PF03948 Ribosomal protein L9, C-terminal domain HLK66_25235 PF01368 DHH family HLK66_25235 PF02272 DHHA1 domain HLK66_25245 PF00665 Integrase core domain HLK66_25245 PF13333 Integrase core domain HLK66_25245 PF13276 HTH-like domain HLK66_25250 PF01084 Ribosomal protein S18 HLK66_25255 PF00436 Single-strand binding protein family HLK66_25260 PF01250 Ribosomal protein S6 HLK66_25265 PF13439 Glycosyltransferase Family 4 HLK66_25265 PF00534 Glycosyl transferases group 1 HLK66_25270 PF06071 Protein of unknown function (DUF933) HLK66_25270 PF01926 50S ribosome-binding GTPase HLK66_25275 PF06107 Bacterial protein of unknown function (DUF951) HLK66_25280 PF00924 Mechanosensitive ion channel HLK66_25285 PF06866 Protein of unknown function (DUF1256) HLK66_25290 PF02195 ParB-like nuclease domain HLK66_25290 PF17762 HTH domain found in ParB protein HLK66_25295 PF13614 AAA domain HLK66_25300 PF02195 ParB-like nuclease domain HLK66_25300 PF17762 HTH domain found in ParB protein HLK66_25305 PF02527 rRNA small subunit methyltransferase G HLK66_25310 PF13932 GidA associated domain HLK66_25310 PF01134 Glucose inhibited division protein A HLK66_25315 PF10396 GTP-binding protein TrmE N-terminus HLK66_25315 PF01926 50S ribosome-binding GTPase HLK66_25315 PF12631 MnmE helical domain HLK66_25320 PF14804 Jag N-terminus HLK66_25320 PF01424 R3H domain HLK66_25325 PF02096 60Kd inner membrane protein HLK66_25330 PF00825 Ribonuclease P HLK66_25335 PF00468 Ribosomal protein L34 HLK66_25365 PF01614 Bacterial transcriptional regulator HLK66_25365 PF09339 IclR helix-turn-helix domain HLK66_25370 PF07690 Major Facilitator Superfamily HLK66_25375 PF03928 Haem-degrading HLK66_25380 PF03992 Antibiotic biosynthesis monooxygenase HLK66_25395 PF05504 Spore germination B3/ GerAC like, C-terminal HLK66_25405 PF03323 Bacillus/Clostridium GerA spore germination protein HLK66_25415 PF00239 Resolvase, N terminal domain HLK66_25415 PF02796 Helix-turn-helix domain of resolvase HLK66_25420 PF13700 Domain of unknown function (DUF4158) HLK66_25420 PF01526 Tn3 transposase DDE domain HLK66_25430 PF07992 Pyridine nucleotide-disulphide oxidoreductase HLK66_25430 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HLK66_25435 PF02040 Arsenical pump membrane protein HLK66_25440 PF01022 Bacterial regulatory protein, arsR family HLK66_25445 PF01022 Bacterial regulatory protein, arsR family HLK66_25455 PF07992 Pyridine nucleotide-disulphide oxidoreductase HLK66_25465 PF01047 MarR family HLK66_25515 PF04098 Rad52/22 family double-strand break repair protein HLK66_25520 PF02768 DNA polymerase III beta subunit, C-terminal domain HLK66_25520 PF02767 DNA polymerase III beta subunit, central domain HLK66_25520 PF00712 DNA polymerase III beta subunit, N-terminal domain HLK66_25585 PF00091 Tubulin/FtsZ family, GTPase domain HLK66_25685 PF13700 Domain of unknown function (DUF4158) HLK66_25685 PF01526 Tn3 transposase DDE domain HLK66_25690 PF00239 Resolvase, N terminal domain HLK66_25690 PF02796 Helix-turn-helix domain of resolvase HLK66_25695 PF00582 Universal stress protein family HLK66_25700 PF03601 Conserved hypothetical protein 698 HLK66_25705 PF03466 LysR substrate binding domain HLK66_25705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HLK66_25715 PF02586 SOS response associated peptidase (SRAP) HLK66_25745 PF07786 Protein of unknown function (DUF1624) HLK66_25745 PF04235 Protein of unknown function (DUF418) HLK66_25755 PF04002 RadC-like JAB domain HLK66_25760 PF00436 Single-strand binding protein family HLK66_25770 PF00145 C-5 cytosine-specific DNA methylase HLK66_25785 PF11638 DnaA N-terminal domain HLK66_25785 PF08299 Bacterial dnaA protein helix-turn-helix HLK66_25785 PF00308 Bacterial dnaA protein HLK66_25805 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) HLK66_25805 PF01348 Type II intron maturase HLK66_25815 PF01348 Type II intron maturase HLK66_25815 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) HLK66_25825 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) HLK66_25890 PF10502 Signal peptidase, peptidase S26 HLK66_25905 PF00665 Integrase core domain HLK66_25910 PF01695 IstB-like ATP binding protein HLK66_25945 PF00145 C-5 cytosine-specific DNA methylase HLK66_25945 PF01381 Helix-turn-helix HLK66_26035 PF01381 Helix-turn-helix HLK66_26065 PF00565 Staphylococcal nuclease homologue HLK66_26100 PF00877 NlpC/P60 family HLK66_26165 PF13495 Phage integrase, N-terminal SAM-like domain HLK66_26165 PF00589 Phage integrase family HLK66_26180 PF00817 impB/mucB/samB family HLK66_26180 PF11798 IMS family HHH motif HLK66_26180 PF11799 impB/mucB/samB family C-terminal domain HLK66_26195 PF01068 ATP dependent DNA ligase domain HLK66_26220 PF08460 Bacterial SH3 domain HLK66_26220 PF01551 Peptidase family M23