DB29_00009 SM00382 ATPases associated with a variety of cellular activities DB29_00017 SM00342 helix_turn_helix, arabinose operon control protein DB29_00017 SM00871 Bacterial transcription activator, effector binding domain DB29_00048 SM00382 ATPases associated with a variety of cellular activities DB29_00057 SM01350 DB29_00057 DB29_00067 SM00851 MGS-like domain DB29_00079 SM00914 DB29_00079 DB29_00080 SM00028 Tetratricopeptide repeats DB29_00093 SM00138 Methyltransferase, chemotaxis proteins DB29_00095 SM00562 DB29_00095 DB29_00108 SM01207 DB29_00108 DB29_00111 SM00316 Ribosomal protein S1-like RNA-binding domain DB29_00112 SM00563 Phosphate acyltransferases DB29_00116 SM01018 B12 binding domain DB29_00121 SM00870 DB29_00121 DB29_00123 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DB29_00125 SM00387 Histidine kinase-like ATPases DB29_00125 SM00388 His Kinase A (phosphoacceptor) domain DB29_00126 SM00448 cheY-homologous receiver domain DB29_00126 SM00862 Transcriptional regulatory protein, C terminal DB29_00128 SM00422 helix_turn_helix, mercury resistance DB29_00135 SM00530 Helix-turn-helix XRE-family like proteins DB29_00136 SM00530 Helix-turn-helix XRE-family like proteins DB29_00140 SM00487 DEAD-like helicases superfamily DB29_00140 SM00490 helicase superfamily c-terminal domain DB29_00151 SM00382 ATPases associated with a variety of cellular activities DB29_00154 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DB29_00154 SM00387 Histidine kinase-like ATPases DB29_00154 SM00388 His Kinase A (phosphoacceptor) domain DB29_00155 SM00448 cheY-homologous receiver domain DB29_00155 SM00862 Transcriptional regulatory protein, C terminal DB29_00159 SM00363 S4 RNA-binding domain DB29_00171 SM00155 Phospholipase D. Active site motifs. DB29_00174 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor DB29_00201 SM00387 Histidine kinase-like ATPases DB29_00203 SM00936 Penicillin-binding protein 5, C-terminal domain DB29_00211 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain DB29_00230 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase DB29_00237 SM00422 helix_turn_helix, mercury resistance DB29_00242 SM00116 Domain in cystathionine beta-synthase and other proteins. DB29_00251 SM00387 Histidine kinase-like ATPases DB29_00251 SM00388 His Kinase A (phosphoacceptor) domain DB29_00256 SM00530 Helix-turn-helix XRE-family like proteins DB29_00257 SM00530 Helix-turn-helix XRE-family like proteins DB29_00275 SM00028 Tetratricopeptide repeats DB29_00301 SM00382 ATPases associated with a variety of cellular activities DB29_00303 SM00387 Histidine kinase-like ATPases DB29_00303 SM00388 His Kinase A (phosphoacceptor) domain DB29_00305 SM00518 AP endonuclease family 2 DB29_00306 SM00487 DEAD-like helicases superfamily DB29_00306 SM00490 helicase superfamily c-terminal domain DB29_00308 SM01058 CarD-like/TRCF domain DB29_00314 SM00400 zinc finger DB29_00314 SM00493 DB29_00314 DB29_00318 SM00116 Domain in cystathionine beta-synthase and other proteins. DB29_00328 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DB29_00340 SM01133 DB29_00340 DB29_00344 SM00729 Elongator protein 3, MiaB family, Radical SAM DB29_00347 SM00271 DnaJ molecular chaperone homology domain DB29_00351 SM00729 Elongator protein 3, MiaB family, Radical SAM DB29_00352 SM00838 Elongation factor G C-terminus DB29_00359 SM00849 Metallo-beta-lactamase superfamily DB29_00361 SM00278 Helix-hairpin-helix DNA-binding motif class 1 DB29_00366 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DB29_00368 SM01103 DB29_00368 DB29_00380 SM00411 bacterial (prokaryotic) histone like domain DB29_00385 SM00926 Molybdopterin oxidoreductase Fe4S4 domain DB29_00390 SM01321 DB29_00390 DB29_00401 SM00642 Alpha-amylase domain DB29_00401 SM01066 Carbohydrate binding domain DB29_00408 SM00382 ATPases associated with a variety of cellular activities DB29_00409 SM00382 ATPases associated with a variety of cellular activities DB29_00414 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen DB29_00422 SM00732 Likely ribonuclease with RNase H fold. DB29_00424 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain DB29_00431 SM00028 Tetratricopeptide repeats DB29_00435 SM00382 ATPases associated with a variety of cellular activities DB29_00447 SM00354 helix_turn _helix lactose operon repressor DB29_00449 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DB29_00449 SM00954 Region found in RelA / SpoT proteins DB29_00460 SM01323 DB29_00460 DB29_00464 SM00382 ATPases associated with a variety of cellular activities DB29_00465 SM00278 Helix-hairpin-helix DNA-binding motif class 1 DB29_00469 SM00257 Lysin motif DB29_00479 SM01317 DB29_00479 DB29_00489 SM00382 ATPases associated with a variety of cellular activities DB29_00493 SM00347 helix_turn_helix multiple antibiotic resistance protein DB29_00501 SM00387 Histidine kinase-like ATPases DB29_00501 SM00388 His Kinase A (phosphoacceptor) domain DB29_00502 SM00448 cheY-homologous receiver domain DB29_00502 SM00862 Transcriptional regulatory protein, C terminal DB29_00511 SM00382 ATPases associated with a variety of cellular activities DB29_00518 SM00878 Biotin carboxylase C-terminal domain DB29_00523 SM00382 ATPases associated with a variety of cellular activities DB29_00524 SM00382 ATPases associated with a variety of cellular activities DB29_00539 SM00345 helix_turn_helix gluconate operon transcriptional repressor DB29_00539 SM00866 DB29_00539 DB29_00541 SM00345 helix_turn_helix gluconate operon transcriptional repressor DB29_00541 SM00866 DB29_00541 DB29_00548 SM00382 ATPases associated with a variety of cellular activities DB29_00555 SM00382 ATPases associated with a variety of cellular activities DB29_00557 SM00763 PrkA AAA domain DB29_00567 SM00567 E-Z type HEAT repeats DB29_00572 SM00382 ATPases associated with a variety of cellular activities DB29_00573 SM00345 helix_turn_helix gluconate operon transcriptional repressor DB29_00575 SM00382 ATPases associated with a variety of cellular activities DB29_00577 SM00342 helix_turn_helix, arabinose operon control protein DB29_00578 SM00640 Glycosyl hydrolases family 32 DB29_00579 SM01217 DB29_00579 DB29_00589 SM00495 Chitin-binding domain type 3 DB29_00601 SM00382 ATPases associated with a variety of cellular activities DB29_00602 SM00421 helix_turn_helix, Lux Regulon DB29_00602 SM00448 cheY-homologous receiver domain DB29_00604 SM00855 Phosphoglycerate mutase family DB29_00632 SM00342 helix_turn_helix, arabinose operon control protein DB29_00640 SM00422 helix_turn_helix, mercury resistance DB29_00650 SM00347 helix_turn_helix multiple antibiotic resistance protein DB29_00657 SM00710 Parallel beta-helix repeats DB29_00666 SM00382 ATPases associated with a variety of cellular activities DB29_00673 SM00478 endonuclease III DB29_00673 SM00525 DB29_00673 DB29_00689 SM00116 Domain in cystathionine beta-synthase and other proteins. DB29_00689 SM01091 Transporter associated domain DB29_00690 SM00855 Phosphoglycerate mutase family DB29_00701 SM01060 DB29_00701 DB29_00707 SM00966 SpoVT / AbrB like domain DB29_00714 SM00420 helix_turn_helix, Deoxyribose operon repressor DB29_00714 SM01134 DB29_00714 DB29_00715 SM00382 ATPases associated with a variety of cellular activities DB29_00718 SM00345 helix_turn_helix gluconate operon transcriptional repressor DB29_00718 SM00866 DB29_00718 DB29_00719 SM00642 Alpha-amylase domain DB29_00728 SM00387 Histidine kinase-like ATPases DB29_00728 SM00388 His Kinase A (phosphoacceptor) domain DB29_00729 SM00382 ATPases associated with a variety of cellular activities DB29_00730 SM00382 ATPases associated with a variety of cellular activities DB29_00733 SM00062 Bacterial periplasmic substrate-binding proteins DB29_00734 SM00382 ATPases associated with a variety of cellular activities DB29_00745 SM00382 ATPases associated with a variety of cellular activities DB29_00746 SM00382 ATPases associated with a variety of cellular activities DB29_00753 SM00382 ATPases associated with a variety of cellular activities DB29_00755 SM00382 ATPases associated with a variety of cellular activities DB29_00761 SM00091 PAS domain DB29_00761 SM00387 Histidine kinase-like ATPases DB29_00761 SM00388 His Kinase A (phosphoacceptor) domain DB29_00768 SM00530 Helix-turn-helix XRE-family like proteins DB29_00775 SM00342 helix_turn_helix, arabinose operon control protein DB29_00776 SM00382 ATPases associated with a variety of cellular activities DB29_00779 SM00448 cheY-homologous receiver domain DB29_00779 SM00862 Transcriptional regulatory protein, C terminal DB29_00780 SM00387 Histidine kinase-like ATPases DB29_00780 SM00388 His Kinase A (phosphoacceptor) domain DB29_00782 SM00344 helix_turn_helix ASNC type DB29_00784 SM00345 helix_turn_helix gluconate operon transcriptional repressor DB29_00796 SM00860 SMI1 / KNR4 family DB29_00816 SM00448 cheY-homologous receiver domain DB29_00816 SM00862 Transcriptional regulatory protein, C terminal DB29_00817 SM00387 Histidine kinase-like ATPases DB29_00817 SM00388 His Kinase A (phosphoacceptor) domain DB29_00819 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor DB29_00822 SM00382 ATPases associated with a variety of cellular activities DB29_00823 SM00387 Histidine kinase-like ATPases DB29_00823 SM00388 His Kinase A (phosphoacceptor) domain DB29_00824 SM00448 cheY-homologous receiver domain DB29_00824 SM00862 Transcriptional regulatory protein, C terminal DB29_00828 SM00495 Chitin-binding domain type 3 DB29_00837 SM00858 DB29_00837 DB29_00848 SM00342 helix_turn_helix, arabinose operon control protein DB29_00849 SM00342 helix_turn_helix, arabinose operon control protein DB29_00858 SM00342 helix_turn_helix, arabinose operon control protein DB29_00858 SM00448 cheY-homologous receiver domain DB29_00859 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DB29_00859 SM00387 Histidine kinase-like ATPases DB29_00866 SM00858 DB29_00866 DB29_00871 SM00342 helix_turn_helix, arabinose operon control protein DB29_00876 SM00833 Cobalamin synthesis protein cobW C-terminal domain DB29_00879 SM00382 ATPases associated with a variety of cellular activities DB29_00882 SM01130 DB29_00882 DB29_00884 SM00346 helix_turn_helix isocitrate lyase regulation DB29_00890 SM00861 Transketolase, pyrimidine binding domain DB29_00899 SM00046 Diacylglycerol kinase catalytic domain (presumed) DB29_00900 SM00845 GatB domain DB29_00908 SM00382 ATPases associated with a variety of cellular activities DB29_00911 SM00278 Helix-hairpin-helix DNA-binding motif class 1 DB29_00911 SM00292 breast cancer carboxy-terminal domain DB29_00911 SM00532 Ligase N family DB29_00915 SM00382 ATPases associated with a variety of cellular activities DB29_00929 SM00116 Domain in cystathionine beta-synthase and other proteins. DB29_00929 SM00382 ATPases associated with a variety of cellular activities DB29_00940 SM00382 ATPases associated with a variety of cellular activities DB29_00941 SM00421 helix_turn_helix, Lux Regulon DB29_00941 SM00448 cheY-homologous receiver domain DB29_00945 SM00822 DB29_00945 DB29_00947 SM00829 Enoylreductase DB29_00949 SM00354 helix_turn _helix lactose operon repressor DB29_00952 SM01209 DB29_00952 DB29_00952 SM01210 DB29_00952 DB29_00953 SM00798 AICARFT/IMPCHase bienzyme DB29_00953 SM00851 MGS-like domain DB29_00959 SM01211 DB29_00959 DB29_00962 SM00998 Adenylosuccinate lyase C-terminus DB29_00964 SM01001 AIR carboxylase DB29_00975 SM00448 cheY-homologous receiver domain DB29_00976 SM00091 PAS domain DB29_00976 SM00387 Histidine kinase-like ATPases DB29_00978 SM00382 ATPases associated with a variety of cellular activities DB29_00979 SM00382 ATPases associated with a variety of cellular activities DB29_00988 SM00422 helix_turn_helix, mercury resistance DB29_00993 SM00420 helix_turn_helix, Deoxyribose operon repressor DB29_00993 SM01134 DB29_00993 DB29_01007 SM00345 helix_turn_helix gluconate operon transcriptional repressor DB29_01007 SM00895 DB29_01007 DB29_01018 SM00530 Helix-turn-helix XRE-family like proteins DB29_01019 SM00257 Lysin motif DB29_01022 SM00091 PAS domain DB29_01022 SM00382 ATPases associated with a variety of cellular activities DB29_01035 SM01120 DB29_01035 DB29_01038 SM00861 Transketolase, pyrimidine binding domain DB29_01043 SM00422 helix_turn_helix, mercury resistance DB29_01045 SM00487 DEAD-like helicases superfamily DB29_01049 SM00382 ATPases associated with a variety of cellular activities DB29_01060 SM00460 Transglutaminase/protease-like homologues DB29_01069 SM00646 DB29_01069 DB29_01079 SM00919 Malic enzyme, NAD binding domain DB29_01079 SM01274 DB29_01079 DB29_01081 SM00448 cheY-homologous receiver domain DB29_01082 SM00387 Histidine kinase-like ATPases DB29_01084 SM00382 ATPases associated with a variety of cellular activities DB29_01087 SM00062 Bacterial periplasmic substrate-binding proteins DB29_01100 SM00926 Molybdopterin oxidoreductase Fe4S4 domain DB29_01100 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DB29_01105 SM00852 Probable molybdopterin binding domain DB29_01106 SM00729 Elongator protein 3, MiaB family, Radical SAM DB29_01107 SM00852 Probable molybdopterin binding domain DB29_01111 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain DB29_01111 SM01232 DB29_01111 DB29_01119 SM00883 Chaperonin 10 Kd subunit DB29_01125 SM00382 ATPases associated with a variety of cellular activities DB29_01125 SM00930 DB29_01125 DB29_01129 SM00881 CoA binding domain DB29_01130 SM00382 ATPases associated with a variety of cellular activities DB29_01159 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor DB29_01161 SM00382 ATPases associated with a variety of cellular activities DB29_01164 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor DB29_01166 SM01329 DB29_01166 DB29_01167 SM00895 DB29_01167 DB29_01169 SM00835 Cupin DB29_01172 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor DB29_01173 SM01058 CarD-like/TRCF domain DB29_01174 SM00357 Cold shock protein domain DB29_01182 SM00731 SprT homologues. DB29_01184 SM00316 Ribosomal protein S1-like RNA-binding domain DB29_01184 SM00732 Likely ribonuclease with RNase H fold. DB29_01185 SM00331 Sigma factor PP2C-like phosphatases DB29_01189 SM00331 Sigma factor PP2C-like phosphatases DB29_01189 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain DB29_01190 SM00387 Histidine kinase-like ATPases DB29_01195 SM01005 Alanine racemase, C-terminal domain DB29_01221 SM00382 ATPases associated with a variety of cellular activities DB29_01225 SM00382 ATPases associated with a variety of cellular activities DB29_01229 SM00387 Histidine kinase-like ATPases DB29_01230 SM00448 cheY-homologous receiver domain DB29_01233 SM00062 Bacterial periplasmic substrate-binding proteins DB29_01233 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. DB29_01234 SM00382 ATPases associated with a variety of cellular activities DB29_01237 SM01002 Alanine dehydrogenase/PNT, C-terminal domain DB29_01237 SM01003 Alanine dehydrogenase/PNT, N-terminal domain DB29_01239 SM00450 Rhodanese Homology Domain DB29_01242 SM00028 Tetratricopeptide repeats DB29_01242 SM00530 Helix-turn-helix XRE-family like proteins DB29_01254 SM00481 DNA polymerase alpha chain like domain DB29_01255 SM00829 Enoylreductase DB29_01263 SM00903 Flavin reductase like domain DB29_01270 SM00347 helix_turn_helix multiple antibiotic resistance protein DB29_01272 SM00116 Domain in cystathionine beta-synthase and other proteins. DB29_01272 SM00924 MgtE intracellular N domain DB29_01273 SM00421 helix_turn_helix, Lux Regulon DB29_01273 SM00448 cheY-homologous receiver domain DB29_01276 SM00342 helix_turn_helix, arabinose operon control protein DB29_01283 SM00342 helix_turn_helix, arabinose operon control protein DB29_01283 SM00448 cheY-homologous receiver domain DB29_01284 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DB29_01287 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) DB29_01287 SM00091 PAS domain DB29_01288 SM00421 helix_turn_helix, Lux Regulon DB29_01288 SM00448 cheY-homologous receiver domain DB29_01289 SM00387 Histidine kinase-like ATPases DB29_01294 SM00926 Molybdopterin oxidoreductase Fe4S4 domain DB29_01304 SM00382 ATPases associated with a variety of cellular activities DB29_01332 SM00382 ATPases associated with a variety of cellular activities DB29_01339 SM00342 helix_turn_helix, arabinose operon control protein DB29_01340 SM00382 ATPases associated with a variety of cellular activities DB29_01344 SM00028 Tetratricopeptide repeats DB29_01344 SM00271 DnaJ molecular chaperone homology domain DB29_01356 SM00387 Histidine kinase-like ATPases DB29_01357 SM00448 cheY-homologous receiver domain DB29_01366 SM00420 helix_turn_helix, Deoxyribose operon repressor DB29_01366 SM01134 DB29_01366 DB29_01375 SM00729 Elongator protein 3, MiaB family, Radical SAM DB29_01382 SM00060 Fibronectin type 3 domain DB29_01382 SM00495 Chitin-binding domain type 3 DB29_01382 SM00636 DB29_01382 DB29_01383 SM00345 helix_turn_helix gluconate operon transcriptional repressor DB29_01383 SM00866 DB29_01383 DB29_01398 SM00829 Enoylreductase DB29_01400 SM01329 DB29_01400 DB29_01406 SM00345 helix_turn_helix gluconate operon transcriptional repressor DB29_01407 SM00382 ATPases associated with a variety of cellular activities DB29_01423 SM00345 helix_turn_helix gluconate operon transcriptional repressor DB29_01423 SM00895 DB29_01423 DB29_01426 SM00382 ATPases associated with a variety of cellular activities DB29_01429 SM00062 Bacterial periplasmic substrate-binding proteins DB29_01458 SM00346 helix_turn_helix isocitrate lyase regulation DB29_01461 SM00382 ATPases associated with a variety of cellular activities DB29_01462 SM00382 ATPases associated with a variety of cellular activities DB29_01476 SM00342 helix_turn_helix, arabinose operon control protein DB29_01478 SM00382 ATPases associated with a variety of cellular activities DB29_01478 SM00930 DB29_01478 DB29_01489 SM00345 helix_turn_helix gluconate operon transcriptional repressor DB29_01489 SM00895 DB29_01489 DB29_01499 SM00487 DEAD-like helicases superfamily DB29_01508 SM00448 cheY-homologous receiver domain DB29_01508 SM00862 Transcriptional regulatory protein, C terminal DB29_01509 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DB29_01509 SM00387 Histidine kinase-like ATPases DB29_01509 SM00388 His Kinase A (phosphoacceptor) domain DB29_01513 SM00849 Metallo-beta-lactamase superfamily DB29_01514 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain DB29_01517 SM00346 helix_turn_helix isocitrate lyase regulation DB29_01520 SM00382 ATPases associated with a variety of cellular activities DB29_01526 SM00984 UDP binding domain DB29_01540 SM00729 Elongator protein 3, MiaB family, Radical SAM DB29_01541 SM00729 Elongator protein 3, MiaB family, Radical SAM DB29_01549 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DB29_01549 SM00387 Histidine kinase-like ATPases DB29_01549 SM00388 His Kinase A (phosphoacceptor) domain DB29_01550 SM00448 cheY-homologous receiver domain DB29_01550 SM00862 Transcriptional regulatory protein, C terminal DB29_01552 SM00345 helix_turn_helix gluconate operon transcriptional repressor DB29_01552 SM00866 DB29_01552 DB29_01554 SM00257 Lysin motif DB29_01558 SM00871 Bacterial transcription activator, effector binding domain DB29_01569 SM00345 helix_turn_helix gluconate operon transcriptional repressor DB29_01569 SM00895 DB29_01569 DB29_01570 SM00345 helix_turn_helix gluconate operon transcriptional repressor DB29_01570 SM00895 DB29_01570 DB29_01571 SM01130 DB29_01571 DB29_01586 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DB29_01586 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DB29_01591 SM00091 PAS domain DB29_01591 SM00382 ATPases associated with a variety of cellular activities DB29_01594 SM00345 helix_turn_helix gluconate operon transcriptional repressor DB29_01602 SM00420 helix_turn_helix, Deoxyribose operon repressor DB29_01604 SM00858 DB29_01604 DB29_01610 SM00342 helix_turn_helix, arabinose operon control protein DB29_01627 SM00420 helix_turn_helix, Deoxyribose operon repressor DB29_01627 SM01134 DB29_01627 DB29_01633 SM00850 LytTr DNA-binding domain DB29_01639 SM00382 ATPases associated with a variety of cellular activities DB29_01642 SM00382 ATPases associated with a variety of cellular activities DB29_01647 SM01007 Class II Aldolase and Adducin N-terminal domain DB29_01650 SM00342 helix_turn_helix, arabinose operon control protein DB29_01656 SM00813 Alpha-L-arabinofuranosidase C-terminus DB29_01663 SM00448 cheY-homologous receiver domain DB29_01663 SM00862 Transcriptional regulatory protein, C terminal DB29_01664 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DB29_01664 SM00387 Histidine kinase-like ATPases DB29_01664 SM00388 His Kinase A (phosphoacceptor) domain DB29_01669 SM00342 helix_turn_helix, arabinose operon control protein DB29_01669 SM00448 cheY-homologous receiver domain DB29_01670 SM00387 Histidine kinase-like ATPases DB29_01675 SM00342 helix_turn_helix, arabinose operon control protein DB29_01678 SM00822 DB29_01678 DB29_01678 SM01007 Class II Aldolase and Adducin N-terminal domain DB29_01680 SM00342 helix_turn_helix, arabinose operon control protein DB29_01685 SM00342 helix_turn_helix, arabinose operon control protein DB29_01702 SM00382 ATPases associated with a variety of cellular activities DB29_01707 SM00342 helix_turn_helix, arabinose operon control protein DB29_01722 SM00382 ATPases associated with a variety of cellular activities DB29_01738 SM00091 PAS domain DB29_01738 SM00382 ATPases associated with a variety of cellular activities DB29_01752 SM00354 helix_turn _helix lactose operon repressor DB29_01762 SM00382 ATPases associated with a variety of cellular activities DB29_01763 SM00422 helix_turn_helix, mercury resistance DB29_01764 SM00354 helix_turn _helix lactose operon repressor DB29_01788 SM00345 helix_turn_helix gluconate operon transcriptional repressor DB29_01797 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor DB29_01805 SM00382 ATPases associated with a variety of cellular activities DB29_01806 SM00345 helix_turn_helix gluconate operon transcriptional repressor DB29_01809 SM00382 ATPases associated with a variety of cellular activities DB29_01813 SM00387 Histidine kinase-like ATPases DB29_01814 SM00448 cheY-homologous receiver domain DB29_01814 SM00862 Transcriptional regulatory protein, C terminal DB29_01815 SM00382 ATPases associated with a variety of cellular activities DB29_01817 SM00530 Helix-turn-helix XRE-family like proteins DB29_01817 SM00966 SpoVT / AbrB like domain DB29_01820 SM00342 helix_turn_helix, arabinose operon control protein DB29_01831 SM00829 Enoylreductase DB29_01833 SM00530 Helix-turn-helix XRE-family like proteins DB29_01838 SM00382 ATPases associated with a variety of cellular activities DB29_01839 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain DB29_01841 SM00422 helix_turn_helix, mercury resistance DB29_01844 SM00422 helix_turn_helix, mercury resistance DB29_01851 SM01251 DB29_01851 DB29_01854 SM00752 Horizontally Transferred TransMembrane Domain DB29_01859 SM01061 CAT RNA binding domain DB29_01860 SM00646 DB29_01860 DB29_01867 SM00530 Helix-turn-helix XRE-family like proteins DB29_01873 SM00382 ATPases associated with a variety of cellular activities DB29_01874 SM00382 ATPases associated with a variety of cellular activities DB29_01876 SM00662 RNA polymerases D DB29_01879 SM00316 Ribosomal protein S1-like RNA-binding domain DB29_01891 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. DB29_01892 SM01374 DB29_01892 DB29_01896 SM00322 K homology RNA-binding domain DB29_01899 SM01382 DB29_01899 DB29_01899 SM01383 DB29_01899 DB29_01903 SM01403 DB29_01903 DB29_01905 SM00838 Elongation factor G C-terminus DB29_01905 SM00889 Elongation factor G, domain IV DB29_01909 SM00663 RNA polymerase I subunit A N-terminus DB29_01915 SM00649 Ribosomal protein L11/L12 DB29_01916 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. DB29_01916 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. DB29_01920 SM00967 RNA 2'-O ribose methyltransferase substrate binding DB29_01922 SM00840 DB29_01922 DB29_01927 SM00670 Large family of predicted nucleotide-binding domains DB29_01929 SM00382 ATPases associated with a variety of cellular activities DB29_01930 SM00382 ATPases associated with a variety of cellular activities DB29_01930 SM01086 C-terminal, D2-small domain, of ClpB protein DB29_01938 SM00905 Dihydroneopterin aldolase DB29_01946 SM00382 ATPases associated with a variety of cellular activities DB29_01948 SM00977 TilS substrate C-terminal domain DB29_01949 SM00220 Serine/Threonine protein kinases, catalytic domain DB29_01951 SM00331 Sigma factor PP2C-like phosphatases DB29_01951 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain DB29_01953 SM00316 Ribosomal protein S1-like RNA-binding domain DB29_01962 SM00363 S4 RNA-binding domain DB29_01968 SM00966 SpoVT / AbrB like domain DB29_01969 SM00487 DEAD-like helicases superfamily DB29_01969 SM00490 helicase superfamily c-terminal domain DB29_01969 SM00982 DB29_01969 DB29_01969 SM01058 CarD-like/TRCF domain DB29_01973 SM01400 DB29_01973 DB29_01983 SM00650 Ribosomal RNA adenine dimethylases DB29_01984 SM00493 DB29_01984 DB29_01985 SM01208 DB29_01985 DB29_01991 SM00382 ATPases associated with a variety of cellular activities DB29_01993 SM00656 DB29_01993 DB29_01994 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor DB29_01997 SM00933 DB29_01997 DB29_01998 SM00966 SpoVT / AbrB like domain DB29_02009 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DB29_02011 SM00829 Enoylreductase DB29_02012 SM00382 ATPases associated with a variety of cellular activities DB29_02012 SM00448 cheY-homologous receiver domain DB29_02013 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. DB29_02013 SM00387 Histidine kinase-like ATPases DB29_02013 SM00388 His Kinase A (phosphoacceptor) domain DB29_02018 SM00493 DB29_02018 DB29_02020 SM00382 ATPases associated with a variety of cellular activities DB29_02027 SM00382 ATPases associated with a variety of cellular activities DB29_02028 SM00382 ATPases associated with a variety of cellular activities DB29_02029 SM00382 ATPases associated with a variety of cellular activities DB29_02031 SM00062 Bacterial periplasmic substrate-binding proteins DB29_02031 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. DB29_02042 SM00382 ATPases associated with a variety of cellular activities DB29_02046 SM00936 Penicillin-binding protein 5, C-terminal domain DB29_02047 SM00116 Domain in cystathionine beta-synthase and other proteins. DB29_02047 SM01240 DB29_02047 DB29_02050 SM00014 Acid phosphatase homologues DB29_02053 SM00434 DNA Topoisomerase IV DB29_02054 SM00387 Histidine kinase-like ATPases DB29_02054 SM00433 TopoisomeraseII DB29_02058 SM00480 DNA polymerase III beta subunit DB29_02059 SM00382 ATPases associated with a variety of cellular activities DB29_02059 SM00760 Bacterial dnaA protein helix-turn-helix domain DB29_02063 SM00393 Putative single-stranded nucleic acids-binding domain DB29_02063 SM01245 DB29_02063 DB29_02066 SM01228 DB29_02066 DB29_02068 SM00470 ParB-like nuclease domain DB29_02070 SM00470 ParB-like nuclease domain DB29_02080 SM00267 diguanylate cyclase DB29_02082 SM00382 ATPases associated with a variety of cellular activities DB29_02083 SM00788 Adenylosuccinate synthetase DB29_02084 SM00448 cheY-homologous receiver domain DB29_02084 SM00862 Transcriptional regulatory protein, C terminal DB29_02085 SM00091 PAS domain DB29_02085 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DB29_02085 SM00387 Histidine kinase-like ATPases DB29_02085 SM00388 His Kinase A (phosphoacceptor) domain DB29_02088 SM00849 Metallo-beta-lactamase superfamily DB29_02089 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. DB29_02091 SM00487 DEAD-like helicases superfamily DB29_02091 SM00490 helicase superfamily c-terminal domain DB29_02095 SM00345 helix_turn_helix gluconate operon transcriptional repressor DB29_02095 SM00895 DB29_02095 DB29_02096 SM00829 Enoylreductase DB29_02100 SM01007 Class II Aldolase and Adducin N-terminal domain DB29_02102 SM00382 ATPases associated with a variety of cellular activities DB29_02108 SM00382 ATPases associated with a variety of cellular activities DB29_02117 SM00382 ATPases associated with a variety of cellular activities DB29_02118 SM00382 ATPases associated with a variety of cellular activities DB29_02122 SM00387 Histidine kinase-like ATPases DB29_02123 SM00448 cheY-homologous receiver domain DB29_02123 SM00850 LytTr DNA-binding domain DB29_02131 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DB29_02131 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DB29_02133 SM00345 helix_turn_helix gluconate operon transcriptional repressor DB29_02133 SM00895 DB29_02133 DB29_02141 SM00345 helix_turn_helix gluconate operon transcriptional repressor DB29_02141 SM00895 DB29_02141 DB29_02142 SM00345 helix_turn_helix gluconate operon transcriptional repressor DB29_02142 SM00895 DB29_02142 DB29_02149 SM00642 Alpha-amylase domain DB29_02153 SM00354 helix_turn _helix lactose operon repressor DB29_02155 SM00882 Coenzyme A transferase DB29_02156 SM00882 Coenzyme A transferase DB29_02160 SM00833 Cobalamin synthesis protein cobW C-terminal domain DB29_02162 SM00533 DNA-binding domain of DNA mismatch repair MUTS family DB29_02162 SM00534 ATPase domain of DNA mismatch repair MUTS family DB29_02175 SM00448 cheY-homologous receiver domain DB29_02175 SM00862 Transcriptional regulatory protein, C terminal DB29_02176 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DB29_02176 SM00387 Histidine kinase-like ATPases DB29_02176 SM00388 His Kinase A (phosphoacceptor) domain DB29_02191 SM00387 Histidine kinase-like ATPases DB29_02192 SM00448 cheY-homologous receiver domain DB29_02194 SM00382 ATPases associated with a variety of cellular activities DB29_02197 SM00387 Histidine kinase-like ATPases DB29_02197 SM00388 His Kinase A (phosphoacceptor) domain DB29_02197 SM00448 cheY-homologous receiver domain DB29_02210 SM00871 Bacterial transcription activator, effector binding domain DB29_02212 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain DB29_02215 SM00422 helix_turn_helix, mercury resistance DB29_02217 SM00046 Diacylglycerol kinase catalytic domain (presumed) DB29_02219 SM00903 Flavin reductase like domain DB29_02221 SM00382 ATPases associated with a variety of cellular activities DB29_02222 SM01060 DB29_02222 DB29_02226 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DB29_02226 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DB29_02232 SM00382 ATPases associated with a variety of cellular activities DB29_02235 SM00914 DB29_02235 DB29_02239 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain DB29_02239 SM00437 Bacterial DNA topoisomerase I DNA-binding domain DB29_02239 SM00493 DB29_02239 DB29_02240 SM00098 Alkaline phosphatase homologues DB29_02243 SM00244 prohibitin homologues DB29_02250 SM00487 DEAD-like helicases superfamily DB29_02250 SM00490 helicase superfamily c-terminal domain DB29_02253 SM01230 DB29_02253 DB29_02256 SM00873 B3/4 domain DB29_02257 SM00345 helix_turn_helix gluconate operon transcriptional repressor DB29_02263 SM00986 Uracil DNA glycosylase superfamily DB29_02263 SM00987 UreE urease accessory protein, C-terminal domain DB29_02267 SM00479 DB29_02267 DB29_02276 SM00345 helix_turn_helix gluconate operon transcriptional repressor DB29_02277 SM00382 ATPases associated with a variety of cellular activities DB29_02278 SM00382 ATPases associated with a variety of cellular activities DB29_02288 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DB29_02304 SM00836 DALR anticodon binding domain DB29_02304 SM01016 Arginyl tRNA synthetase N terminal dom DB29_02306 SM00155 Phospholipase D. Active site motifs. DB29_02315 SM00448 cheY-homologous receiver domain DB29_02320 SM00357 Cold shock protein domain DB29_02320 SM00382 ATPases associated with a variety of cellular activities DB29_02320 SM00959 Rho termination factor, N-terminal domain DB29_02325 SM00937 DB29_02325 DB29_02332 SM00226 Low molecular weight phosphatase family DB29_02333 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DB29_02333 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DB29_02348 SM00382 ATPases associated with a variety of cellular activities DB29_02393 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. DB29_02394 SM00028 Tetratricopeptide repeats DB29_02407 SM00860 SMI1 / KNR4 family DB29_02412 SM01061 CAT RNA binding domain DB29_02427 SM00382 ATPases associated with a variety of cellular activities DB29_02428 SM00422 helix_turn_helix, mercury resistance DB29_02432 SM00796 Allophanate hydrolase subunit 1 DB29_02433 SM00797 Allophanate hydrolase subunit 2 DB29_02436 SM00422 helix_turn_helix, mercury resistance DB29_02438 SM00354 helix_turn _helix lactose operon repressor DB29_02439 SM00640 Glycosyl hydrolases family 32 DB29_02441 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor DB29_02442 SM00822 DB29_02442 DB29_02450 SM01022 DB29_02450 DB29_02455 SM00382 ATPases associated with a variety of cellular activities DB29_02458 SM00382 ATPases associated with a variety of cellular activities DB29_02463 SM01092 CO dehydrogenase flavoprotein C-terminal domain DB29_02464 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain DB29_02481 SM00889 Elongation factor G, domain IV DB29_02490 SM00382 ATPases associated with a variety of cellular activities DB29_02492 SM00062 Bacterial periplasmic substrate-binding proteins DB29_02496 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor DB29_02507 SM00028 Tetratricopeptide repeats DB29_02540 SM01321 DB29_02540 DB29_02559 SM00382 ATPases associated with a variety of cellular activities DB29_02560 SM00382 ATPases associated with a variety of cellular activities DB29_02569 SM00382 ATPases associated with a variety of cellular activities DB29_02571 SM00387 Histidine kinase-like ATPases DB29_02572 SM00342 helix_turn_helix, arabinose operon control protein DB29_02572 SM00448 cheY-homologous receiver domain DB29_02577 SM00387 Histidine kinase-like ATPases DB29_02577 SM00388 His Kinase A (phosphoacceptor) domain DB29_02578 SM00448 cheY-homologous receiver domain DB29_02578 SM00862 Transcriptional regulatory protein, C terminal DB29_02579 SM00382 ATPases associated with a variety of cellular activities DB29_02597 SM00028 Tetratricopeptide repeats DB29_02598 SM00346 helix_turn_helix isocitrate lyase regulation DB29_02608 SM00829 Enoylreductase DB29_02610 SM00420 helix_turn_helix, Deoxyribose operon repressor DB29_02610 SM01134 DB29_02610 DB29_02613 SM01120 DB29_02613 DB29_02615 SM01130 DB29_02615 DB29_02620 SM00354 helix_turn _helix lactose operon repressor DB29_02635 SM00342 helix_turn_helix, arabinose operon control protein DB29_02635 SM00448 cheY-homologous receiver domain DB29_02636 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DB29_02646 SM00860 SMI1 / KNR4 family DB29_02650 SM00420 helix_turn_helix, Deoxyribose operon repressor DB29_02650 SM01134 DB29_02650 DB29_02654 SM00829 Enoylreductase DB29_02658 SM00028 Tetratricopeptide repeats DB29_02661 SM00530 Helix-turn-helix XRE-family like proteins DB29_02667 SM00387 Histidine kinase-like ATPases DB29_02668 SM00342 helix_turn_helix, arabinose operon control protein DB29_02668 SM00448 cheY-homologous receiver domain DB29_02677 SM00345 helix_turn_helix gluconate operon transcriptional repressor DB29_02677 SM00866 DB29_02677 DB29_02678 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain DB29_02682 SM00387 Histidine kinase-like ATPases DB29_02682 SM00388 His Kinase A (phosphoacceptor) domain DB29_02682 SM00448 cheY-homologous receiver domain DB29_02683 SM00448 cheY-homologous receiver domain DB29_02683 SM01043 Bacterial transcriptional activator domain DB29_02687 SM00530 Helix-turn-helix XRE-family like proteins DB29_02692 SM00382 ATPases associated with a variety of cellular activities DB29_02693 SM00530 Helix-turn-helix XRE-family like proteins DB29_02695 SM01260 DB29_02695 DB29_02697 SM00382 ATPases associated with a variety of cellular activities DB29_02700 SM00448 cheY-homologous receiver domain DB29_02700 SM00862 Transcriptional regulatory protein, C terminal DB29_02701 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DB29_02701 SM00387 Histidine kinase-like ATPases DB29_02701 SM00388 His Kinase A (phosphoacceptor) domain DB29_02714 SM00354 helix_turn _helix lactose operon repressor DB29_02717 SM00382 ATPases associated with a variety of cellular activities DB29_02721 SM00871 Bacterial transcription activator, effector binding domain DB29_02723 SM00422 helix_turn_helix, mercury resistance DB29_02728 SM00257 Lysin motif DB29_02730 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DB29_02730 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DB29_02731 SM00822 DB29_02731 DB29_02734 SM00342 helix_turn_helix, arabinose operon control protein DB29_02735 SM00382 ATPases associated with a variety of cellular activities DB29_02742 SM00354 helix_turn _helix lactose operon repressor DB29_02752 SM00422 helix_turn_helix, mercury resistance DB29_02754 SM00650 Ribosomal RNA adenine dimethylases DB29_02768 SM00382 ATPases associated with a variety of cellular activities DB29_02776 SM00342 helix_turn_helix, arabinose operon control protein DB29_02782 SM00240 Forkhead associated domain DB29_02782 SM00862 Transcriptional regulatory protein, C terminal DB29_02786 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DB29_02787 SM00354 helix_turn _helix lactose operon repressor DB29_02790 SM00342 helix_turn_helix, arabinose operon control protein DB29_02792 SM00354 helix_turn _helix lactose operon repressor DB29_02800 SM00421 helix_turn_helix, Lux Regulon DB29_02819 SM00382 ATPases associated with a variety of cellular activities DB29_02819 SM01086 C-terminal, D2-small domain, of ClpB protein DB29_02820 SM00646 DB29_02820 DB29_02847 SM00725 NEAr Transporter domain DB29_02848 SM00725 NEAr Transporter domain DB29_02851 SM00382 ATPases associated with a variety of cellular activities DB29_02854 SM00116 Domain in cystathionine beta-synthase and other proteins. DB29_02854 SM01091 Transporter associated domain DB29_02858 SM00849 Metallo-beta-lactamase superfamily DB29_02863 SM00345 helix_turn_helix gluconate operon transcriptional repressor DB29_02864 SM00382 ATPases associated with a variety of cellular activities DB29_02879 SM00382 ATPases associated with a variety of cellular activities DB29_02881 SM00062 Bacterial periplasmic substrate-binding proteins DB29_02883 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DB29_02885 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor DB29_02889 SM00420 helix_turn_helix, Deoxyribose operon repressor DB29_02894 SM00354 helix_turn _helix lactose operon repressor DB29_02896 SM00835 Cupin DB29_02902 SM00387 Histidine kinase-like ATPases DB29_02903 SM00421 helix_turn_helix, Lux Regulon DB29_02903 SM00448 cheY-homologous receiver domain DB29_02906 SM00813 Alpha-L-arabinofuranosidase C-terminus DB29_02909 SM00831 Cation transporter/ATPase, N-terminus DB29_02913 SM00382 ATPases associated with a variety of cellular activities DB29_02920 SM00354 helix_turn _helix lactose operon repressor DB29_02927 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family DB29_02934 SM00829 Enoylreductase DB29_02936 SM00829 Enoylreductase DB29_02937 SM00382 ATPases associated with a variety of cellular activities DB29_02942 SM01061 CAT RNA binding domain DB29_02944 SM00421 helix_turn_helix, Lux Regulon DB29_02944 SM00448 cheY-homologous receiver domain DB29_02947 SM00342 helix_turn_helix, arabinose operon control protein DB29_02947 SM00448 cheY-homologous receiver domain DB29_02956 SM00028 Tetratricopeptide repeats DB29_02957 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DB29_02967 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DB29_02974 SM00530 Helix-turn-helix XRE-family like proteins DB29_02983 SM00287 Bacterial SH3 domain homologues DB29_02983 SM00646 DB29_02983 DB29_02987 SM01207 DB29_02987 DB29_02992 SM00342 helix_turn_helix, arabinose operon control protein DB29_02999 SM00342 helix_turn_helix, arabinose operon control protein DB29_03002 SM00342 helix_turn_helix, arabinose operon control protein DB29_03010 SM00710 Parallel beta-helix repeats DB29_03025 SM00028 Tetratricopeptide repeats DB29_03032 SM00382 ATPases associated with a variety of cellular activities DB29_03036 SM00347 helix_turn_helix multiple antibiotic resistance protein DB29_03041 SM00858 DB29_03041 DB29_03051 SM00382 ATPases associated with a variety of cellular activities DB29_03052 SM00387 Histidine kinase-like ATPases DB29_03052 SM00388 His Kinase A (phosphoacceptor) domain DB29_03053 SM00448 cheY-homologous receiver domain DB29_03053 SM00862 Transcriptional regulatory protein, C terminal DB29_03061 SM00420 helix_turn_helix, Deoxyribose operon repressor DB29_03061 SM01134 DB29_03061 DB29_03063 SM01240 DB29_03063 DB29_03072 SM00382 ATPases associated with a variety of cellular activities DB29_03096 SM00382 ATPases associated with a variety of cellular activities DB29_03099 SM01057 Eukaryotic-type carbonic anhydrase DB29_03113 SM00984 UDP binding domain DB29_03137 SM00342 helix_turn_helix, arabinose operon control protein DB29_03138 SM00478 endonuclease III DB29_03140 SM01400 DB29_03140 DB29_03148 SM00421 helix_turn_helix, Lux Regulon DB29_03148 SM00448 cheY-homologous receiver domain DB29_03149 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. DB29_03155 SM00849 Metallo-beta-lactamase superfamily DB29_03159 SM00382 ATPases associated with a variety of cellular activities DB29_03160 SM00345 helix_turn_helix gluconate operon transcriptional repressor DB29_03165 SM00530 Helix-turn-helix XRE-family like proteins DB29_03171 SM00382 ATPases associated with a variety of cellular activities DB29_03174 SM00354 helix_turn _helix lactose operon repressor DB29_03178 SM00640 Glycosyl hydrolases family 32 DB29_03179 SM00640 Glycosyl hydrolases family 32 DB29_03181 SM00257 Lysin motif DB29_03181 SM00636 DB29_03181 DB29_03197 SM00047 Lysozyme subfamily 2 DB29_03197 SM00287 Bacterial SH3 domain homologues DB29_03199 SM00344 helix_turn_helix ASNC type DB29_03200 SM00382 ATPases associated with a variety of cellular activities DB29_03201 SM00382 ATPases associated with a variety of cellular activities DB29_03207 SM00387 Histidine kinase-like ATPases DB29_03208 SM00421 helix_turn_helix, Lux Regulon DB29_03208 SM00448 cheY-homologous receiver domain DB29_03211 SM00487 DEAD-like helicases superfamily DB29_03211 SM00490 helicase superfamily c-terminal domain DB29_03225 SM00357 Cold shock protein domain DB29_03227 SM00957 SecA DEAD-like domain DB29_03227 SM00958 SecA preprotein cross-linking domain DB29_03228 SM00937 DB29_03228 DB29_03230 SM00382 ATPases associated with a variety of cellular activities DB29_03233 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. DB29_03233 SM00245 tail specific protease DB29_03234 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. DB29_03237 SM00487 DEAD-like helicases superfamily DB29_03237 SM00490 helicase superfamily c-terminal domain DB29_03238 SM00382 ATPases associated with a variety of cellular activities DB29_03258 SM00028 Tetratricopeptide repeats DB29_03268 SM00116 Domain in cystathionine beta-synthase and other proteins. DB29_03268 SM00382 ATPases associated with a variety of cellular activities DB29_03275 SM00028 Tetratricopeptide repeats DB29_03277 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DB29_03281 SM01192 DB29_03281 DB29_03281 SM01193 DB29_03281 DB29_03282 SM00345 helix_turn_helix gluconate operon transcriptional repressor DB29_03282 SM00895 DB29_03282 DB29_03283 SM01130 DB29_03283 DB29_03294 SM00316 Ribosomal protein S1-like RNA-binding domain DB29_03294 SM00357 Cold shock protein domain DB29_03294 SM00955 DB29_03294 DB29_03314 SM00382 ATPases associated with a variety of cellular activities DB29_03314 SM00930 DB29_03314 DB29_03321 SM00382 ATPases associated with a variety of cellular activities DB29_03328 SM01061 CAT RNA binding domain DB29_03333 SM00342 helix_turn_helix, arabinose operon control protein DB29_03352 SM00729 Elongator protein 3, MiaB family, Radical SAM DB29_03373 SM00062 Bacterial periplasmic substrate-binding proteins DB29_03386 SM01321 DB29_03386 DB29_03388 SM00411 bacterial (prokaryotic) histone like domain DB29_03391 SM00344 helix_turn_helix ASNC type DB29_03394 SM00487 DEAD-like helicases superfamily DB29_03394 SM00490 helicase superfamily c-terminal domain DB29_03395 SM00316 Ribosomal protein S1-like RNA-binding domain DB29_03403 SM01131 DB29_03403 DB29_03410 SM00014 Acid phosphatase homologues DB29_03413 SM00382 ATPases associated with a variety of cellular activities DB29_03415 SM01321 DB29_03415 DB29_03425 SM00382 ATPases associated with a variety of cellular activities DB29_03433 SM00947 Carbonic anhydrase DB29_03450 SM00363 S4 RNA-binding domain DB29_03453 SM00422 helix_turn_helix, mercury resistance DB29_03454 SM00342 helix_turn_helix, arabinose operon control protein DB29_03454 SM00871 Bacterial transcription activator, effector binding domain DB29_03459 SM00382 ATPases associated with a variety of cellular activities DB29_03462 SM00861 Transketolase, pyrimidine binding domain DB29_03466 SM00822 DB29_03466 DB29_03481 SM00843 DB29_03481 DB29_03485 SM00830 Chorismate mutase type II DB29_03486 SM00354 helix_turn _helix lactose operon repressor DB29_03488 SM00116 Domain in cystathionine beta-synthase and other proteins. DB29_03492 SM00363 S4 RNA-binding domain DB29_03493 SM00363 S4 RNA-binding domain DB29_03493 SM01390 DB29_03493 DB29_03500 SM00981 DB29_03500 DB29_03519 SM00849 Metallo-beta-lactamase superfamily DB29_03521 SM00116 Domain in cystathionine beta-synthase and other proteins. DB29_03526 SM00481 DNA polymerase alpha chain like domain DB29_03527 SM00919 Malic enzyme, NAD binding domain DB29_03527 SM01274 DB29_03527 DB29_03528 SM00345 helix_turn_helix gluconate operon transcriptional repressor DB29_03528 SM00895 DB29_03528 DB29_03536 SM01329 DB29_03536 DB29_03538 SM00344 helix_turn_helix ASNC type DB29_03539 SM00448 cheY-homologous receiver domain DB29_03539 SM00862 Transcriptional regulatory protein, C terminal DB29_03540 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DB29_03540 SM00387 Histidine kinase-like ATPases DB29_03540 SM00388 His Kinase A (phosphoacceptor) domain DB29_03541 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs DB29_03541 SM00474 3'-5' exonuclease DB29_03541 SM00475 5'-3' exonuclease DB29_03541 SM00482 DNA polymerase A domain DB29_03542 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain DB29_03542 SM01232 DB29_03542 DB29_03545 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DB29_03550 SM00382 ATPases associated with a variety of cellular activities DB29_03551 SM00729 Elongator protein 3, MiaB family, Radical SAM DB29_03553 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain DB29_03559 SM00382 ATPases associated with a variety of cellular activities DB29_03571 SM00967 RNA 2'-O ribose methyltransferase substrate binding DB29_03573 SM00873 B3/4 domain DB29_03573 SM00874 tRNA synthetase B5 domain DB29_03573 SM00896 Ferredoxin-fold anticodon binding domain DB29_03576 SM00481 DNA polymerase alpha chain like domain DB29_03576 SM00483 DNA polymerase X family DB29_03577 SM00463 Small MutS-related domain DB29_03577 SM00533 DNA-binding domain of DNA mismatch repair MUTS family DB29_03577 SM00534 ATPase domain of DNA mismatch repair MUTS family DB29_03582 SM00893 Electron transfer flavoprotein domain DB29_03583 SM00893 Electron transfer flavoprotein domain DB29_03585 SM00465 GIY-YIG type nucleases (URI domain) DB29_03592 SM00421 helix_turn_helix, Lux Regulon DB29_03595 SM00347 helix_turn_helix multiple antibiotic resistance protein DB29_03598 SM00450 Rhodanese Homology Domain DB29_03599 SM00909 Sporulation and spore germination DB29_03611 SM00917 LeuA allosteric (dimerisation) domain DB29_03612 SM01329 DB29_03612 DB29_03617 SM00382 ATPases associated with a variety of cellular activities DB29_03617 SM00994 ClpX C4-type zinc finger DB29_03617 SM01086 C-terminal, D2-small domain, of ClpB protein DB29_03618 SM00382 ATPases associated with a variety of cellular activities DB29_03619 SM00382 ATPases associated with a variety of cellular activities DB29_03619 SM00464 Found in ATP-dependent protease La (LON) DB29_03625 SM01004 Delta-aminolevulinic acid dehydratase DB29_03627 SM00257 Lysin motif DB29_03650 SM00316 Ribosomal protein S1-like RNA-binding domain DB29_03654 SM00966 SpoVT / AbrB like domain DB29_03657 SM00986 Uracil DNA glycosylase superfamily DB29_03657 SM00987 UreE urease accessory protein, C-terminal domain DB29_03666 SM00382 ATPases associated with a variety of cellular activities DB29_03667 SM00382 ATPases associated with a variety of cellular activities DB29_03673 SM00073 Histidine Phosphotransfer domain DB29_03673 SM00260 Two component signalling adaptor domain DB29_03673 SM00387 Histidine kinase-like ATPases DB29_03673 SM01231 DB29_03673 DB29_03674 SM00260 Two component signalling adaptor domain DB29_03676 SM00914 DB29_03676 DB29_03677 SM00060 Fibronectin type 3 domain DB29_03684 SM00450 Rhodanese Homology Domain DB29_03690 SM00487 DEAD-like helicases superfamily DB29_03690 SM00490 helicase superfamily c-terminal domain DB29_03697 SM00859 Semialdehyde dehydrogenase, NAD binding domain DB29_03701 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain DB29_03702 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DB29_03711 SM00825 Beta-ketoacyl synthase DB29_03714 SM00116 Domain in cystathionine beta-synthase and other proteins. DB29_03716 SM00257 Lysin motif DB29_03719 SM00954 Region found in RelA / SpoT proteins DB29_03726 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DB29_03740 SM01118 DB29_03740 DB29_03742 SM00954 Region found in RelA / SpoT proteins DB29_03759 SM01234 DB29_03759 DB29_03767 SM00849 Metallo-beta-lactamase superfamily DB29_03770 SM00487 DEAD-like helicases superfamily DB29_03770 SM00490 helicase superfamily c-terminal domain DB29_03774 SM00450 Rhodanese Homology Domain DB29_03779 SM00529 Helix-turn-helix diphteria tox regulatory element DB29_03784 SM00841 Elongation factor P, C-terminal DB29_03784 SM01185 DB29_03784 DB29_03789 SM00382 ATPases associated with a variety of cellular activities DB29_03799 SM00878 Biotin carboxylase C-terminal domain DB29_03805 SM00861 Transketolase, pyrimidine binding domain DB29_03806 SM00363 S4 RNA-binding domain DB29_03810 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. DB29_03811 SM00448 cheY-homologous receiver domain DB29_03815 SM00091 PAS domain DB29_03815 SM00382 ATPases associated with a variety of cellular activities DB29_03816 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DB29_03819 SM00861 Transketolase, pyrimidine binding domain DB29_03835 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DB29_03845 SM00849 Metallo-beta-lactamase superfamily DB29_03851 SM00861 Transketolase, pyrimidine binding domain DB29_03854 SM00382 ATPases associated with a variety of cellular activities DB29_03855 SM00382 ATPases associated with a variety of cellular activities DB29_03864 SM00248 ankyrin repeats DB29_03870 SM00838 Elongation factor G C-terminus DB29_03874 SM00670 Large family of predicted nucleotide-binding domains DB29_03877 SM00878 Biotin carboxylase C-terminal domain DB29_03899 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. DB29_03910 SM00740 DB29_03910 DB29_03911 SM00740 DB29_03911 DB29_03919 SM00842 Cell division protein FtsA DB29_03920 SM00864 Tubulin/FtsZ family, GTPase domain DB29_03920 SM00865 Tubulin/FtsZ family, C-terminal domain DB29_03929 SM00363 S4 RNA-binding domain DB29_03934 SM00363 S4 RNA-binding domain DB29_03939 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain DB29_03940 SM00851 MGS-like domain DB29_03940 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DB29_03943 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family DB29_03949 SM00831 Cation transporter/ATPase, N-terminus DB29_03952 SM00072 Guanylate kinase homologues. DB29_03953 SM01409 DB29_03953 DB29_03955 SM00487 DEAD-like helicases superfamily DB29_03955 SM00490 helicase superfamily c-terminal domain DB29_03958 SM00331 Sigma factor PP2C-like phosphatases DB29_03958 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain DB29_03959 SM00220 Serine/Threonine protein kinases, catalytic domain DB29_03959 SM00740 DB29_03959 DB29_03965 SM01120 DB29_03965 DB29_03965 SM01121 DB29_03965 DB29_03969 SM00487 DEAD-like helicases superfamily DB29_03969 SM00490 helicase superfamily c-terminal domain DB29_03972 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. DB29_03973 SM00822 DB29_03973 DB29_03975 SM00358 Double-stranded RNA binding motif DB29_03975 SM00535 Ribonuclease III family DB29_03977 SM00968 SMC proteins Flexible Hinge Domain DB29_03979 SM00382 ATPases associated with a variety of cellular activities DB29_03979 SM00962 SRP54-type protein, GTPase domain DB29_03979 SM00963 SRP54-type protein, helical bundle domain DB29_03981 SM00382 ATPases associated with a variety of cellular activities DB29_03981 SM00962 SRP54-type protein, GTPase domain DB29_03981 SM00963 SRP54-type protein, helical bundle domain DB29_03987 SM00836 DALR anticodon binding domain DB29_03987 SM01016 Arginyl tRNA synthetase N terminal dom DB29_03997 SM00881 CoA binding domain DB29_03999 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain DB29_03999 SM00437 Bacterial DNA topoisomerase I DNA-binding domain DB29_03999 SM00493 DB29_03999 DB29_04003 SM00382 ATPases associated with a variety of cellular activities DB29_04003 SM01086 C-terminal, D2-small domain, of ClpB protein DB29_04011 SM00382 ATPases associated with a variety of cellular activities DB29_04021 SM00448 cheY-homologous receiver domain DB29_04028 SM00382 ATPases associated with a variety of cellular activities DB29_04028 SM00962 SRP54-type protein, GTPase domain DB29_04028 SM01245 DB29_04028 DB29_04042 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. DB29_04044 SM00479 DB29_04044 DB29_04044 SM00481 DNA polymerase alpha chain like domain DB29_04046 SM00316 Ribosomal protein S1-like RNA-binding domain DB29_04046 SM00322 K homology RNA-binding domain DB29_04053 SM00904 Riboflavin kinase DB29_04055 SM01387 DB29_04055 DB29_04056 SM00316 Ribosomal protein S1-like RNA-binding domain DB29_04056 SM00322 K homology RNA-binding domain DB29_04062 SM00859 Semialdehyde dehydrogenase, NAD binding domain DB29_04064 SM01130 DB29_04064 DB29_04065 SM00849 Metallo-beta-lactamase superfamily DB29_04068 SM00382 ATPases associated with a variety of cellular activities DB29_04068 SM00843 DB29_04068 DB29_04069 SM00345 helix_turn_helix gluconate operon transcriptional repressor DB29_04069 SM00866 DB29_04069 DB29_04077 SM00852 Probable molybdopterin binding domain DB29_04078 SM00487 DEAD-like helicases superfamily DB29_04078 SM00490 helicase superfamily c-terminal domain DB29_04079 SM00382 ATPases associated with a variety of cellular activities DB29_04084 SM00322 K homology RNA-binding domain DB29_04084 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DB29_04088 SM00729 Elongator protein 3, MiaB family, Radical SAM DB29_04091 SM00533 DNA-binding domain of DNA mismatch repair MUTS family DB29_04091 SM00534 ATPase domain of DNA mismatch repair MUTS family DB29_04093 SM00853 MutL C terminal dimerisation domain DB29_04093 SM01340 DB29_04093 DB29_04099 SM00382 ATPases associated with a variety of cellular activities DB29_04101 SM01230 DB29_04101 DB29_04109 SM00346 helix_turn_helix isocitrate lyase regulation DB29_04116 SM00857 Resolvase, N terminal domain DB29_04119 SM00861 Transketolase, pyrimidine binding domain DB29_04122 SM00382 ATPases associated with a variety of cellular activities DB29_04123 SM00382 ATPases associated with a variety of cellular activities DB29_04134 SM00382 ATPases associated with a variety of cellular activities DB29_04140 SM00052 Putative diguanylate phosphodiesterase DB29_04145 SM00260 Two component signalling adaptor domain DB29_04145 SM00448 cheY-homologous receiver domain DB29_04162 SM00421 helix_turn_helix, Lux Regulon DB29_04162 SM00448 cheY-homologous receiver domain DB29_04167 SM00382 ATPases associated with a variety of cellular activities DB29_04169 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain DB29_04169 SM00437 Bacterial DNA topoisomerase I DNA-binding domain DB29_04169 SM00493 DB29_04169 DB29_04175 SM00861 Transketolase, pyrimidine binding domain DB29_04178 SM00382 ATPases associated with a variety of cellular activities DB29_04180 SM00341 Helicase and RNase D C-terminal DB29_04180 SM00487 DEAD-like helicases superfamily DB29_04180 SM00490 helicase superfamily c-terminal domain DB29_04180 SM00956 DB29_04180 DB29_04185 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs DB29_04185 SM00475 5'-3' exonuclease DB29_04195 SM00857 Resolvase, N terminal domain DB29_04198 SM00530 Helix-turn-helix XRE-family like proteins DB29_04214 SM01040 BRO family, N-terminal domain DB29_04246 SM00646 DB29_04246 DB29_04249 SM00028 Tetratricopeptide repeats DB29_04251 SM00257 Lysin motif DB29_04251 SM00644 DB29_04251 DB29_04251 SM00701 Animal peptidoglycan recognition proteins homologous to Bacteriophage T3 lysozyme. DB29_04255 SM00849 Metallo-beta-lactamase superfamily DB29_04270 SM00998 Adenylosuccinate lyase C-terminus DB29_04273 SM00347 helix_turn_helix multiple antibiotic resistance protein DB29_04281 SM00345 helix_turn_helix gluconate operon transcriptional repressor DB29_04281 SM00866 DB29_04281 DB29_04285 SM00287 Bacterial SH3 domain homologues DB29_04285 SM00646 DB29_04285 DB29_04297 SM00479 DB29_04297 DB29_04297 SM00487 DEAD-like helicases superfamily DB29_04297 SM00491 DB29_04297 DB29_04304 SM00478 endonuclease III DB29_04307 SM01321 DB29_04307 DB29_04308 SM00060 Fibronectin type 3 domain DB29_04317 SM00849 Metallo-beta-lactamase superfamily DB29_04322 SM00567 E-Z type HEAT repeats DB29_04322 SM00932 Scaffold protein Nfu/NifU N terminal DB29_04335 SM01298 DB29_04335 DB29_04336 SM01130 DB29_04336 DB29_04349 SM00487 DEAD-like helicases superfamily DB29_04349 SM00490 helicase superfamily c-terminal domain DB29_04358 SM00326 Src homology 3 domains DB29_04369 SM00116 Domain in cystathionine beta-synthase and other proteins. DB29_04369 SM00382 ATPases associated with a variety of cellular activities DB29_04371 SM00881 CoA binding domain DB29_04372 SM00387 Histidine kinase-like ATPases DB29_04372 SM00433 TopoisomeraseII DB29_04373 SM00434 DNA Topoisomerase IV DB29_04384 SM01059 Chloramphenicol acetyltransferase DB29_0P0004 SM00857 Resolvase, N terminal domain DB29_0P0011 SM00318 Staphylococcal nuclease homologues DB29_0P0025 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain DB29_0P0025 SM00437 Bacterial DNA topoisomerase I DNA-binding domain DB29_0P0025 SM00493 DB29_0P0025 DB29_0P0027 SM00422 helix_turn_helix, mercury resistance DB29_0P0030 SM00942 Primase C terminal 1 (PriCT-1) DB29_0P0033 SM00530 Helix-turn-helix XRE-family like proteins